Query 015729
Match_columns 401
No_of_seqs 117 out of 2018
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 17:39:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015729.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015729hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nnk_A Ureidoglycine-glyoxylat 100.0 1.8E-45 6.2E-50 352.4 44.9 380 7-392 11-409 (411)
2 2z9v_A Aspartate aminotransfer 100.0 1.2E-45 4.1E-50 351.5 43.3 388 1-393 1-391 (392)
3 3isl_A Purine catabolism prote 100.0 3.1E-44 1.1E-48 344.3 45.5 380 7-392 9-409 (416)
4 3zrp_A Serine-pyruvate aminotr 100.0 5.1E-44 1.7E-48 339.0 43.5 374 9-391 2-381 (384)
5 3kgw_A Alanine-glyoxylate amin 100.0 1.2E-42 4.2E-47 330.5 42.1 363 7-374 21-389 (393)
6 2dr1_A PH1308 protein, 386AA l 100.0 4.6E-42 1.6E-46 325.9 41.3 363 6-375 17-381 (386)
7 3f0h_A Aminotransferase; RER07 100.0 3.6E-42 1.2E-46 325.6 37.6 354 8-372 18-373 (376)
8 2ch1_A 3-hydroxykynurenine tra 100.0 4.1E-41 1.4E-45 320.6 43.5 362 9-375 18-385 (396)
9 2huf_A Alanine glyoxylate amin 100.0 4.1E-41 1.4E-45 320.3 43.2 364 7-376 17-386 (393)
10 1iug_A Putative aspartate amin 100.0 8.9E-42 3E-46 319.9 36.3 344 11-373 3-348 (352)
11 2yrr_A Aminotransferase, class 100.0 1E-40 3.4E-45 312.6 39.0 349 11-372 2-352 (353)
12 1vjo_A Alanine--glyoxylate ami 100.0 1.9E-39 6.6E-44 308.8 41.8 356 9-370 34-392 (393)
13 3ffr_A Phosphoserine aminotran 100.0 1.7E-40 5.8E-45 312.3 33.8 346 9-370 4-361 (362)
14 2bkw_A Alanine-glyoxylate amin 100.0 1.7E-39 5.7E-44 308.2 37.6 361 5-374 1-385 (385)
15 1m32_A 2-aminoethylphosphonate 100.0 3.4E-39 1.2E-43 303.7 39.3 356 9-373 4-365 (366)
16 3qm2_A Phosphoserine aminotran 100.0 3E-41 1E-45 317.3 21.0 340 9-373 27-385 (386)
17 3m5u_A Phosphoserine aminotran 100.0 3.8E-39 1.3E-43 300.3 33.9 337 7-372 3-359 (361)
18 3e77_A Phosphoserine aminotran 100.0 3.3E-39 1.1E-43 301.7 25.0 339 12-374 16-376 (377)
19 1kmj_A Selenocysteine lyase; p 100.0 6E-37 2E-41 292.6 31.8 348 9-373 24-405 (406)
20 1elu_A L-cysteine/L-cystine C- 100.0 4.2E-37 1.4E-41 292.1 30.4 348 3-368 11-387 (390)
21 3ke3_A Putative serine-pyruvat 100.0 3.7E-37 1.3E-41 291.6 29.5 329 33-374 26-377 (379)
22 2c0r_A PSAT, phosphoserine ami 100.0 6.1E-37 2.1E-41 288.4 29.9 340 6-373 1-361 (362)
23 1t3i_A Probable cysteine desul 100.0 4.1E-36 1.4E-40 288.2 33.1 353 9-375 29-415 (420)
24 3lvm_A Cysteine desulfurase; s 100.0 3.5E-36 1.2E-40 289.1 30.9 347 3-374 17-400 (423)
25 4hvk_A Probable cysteine desul 100.0 2.6E-36 8.9E-41 285.6 29.5 338 10-373 2-373 (382)
26 1eg5_A Aminotransferase; PLP-d 100.0 7.7E-36 2.6E-40 282.8 31.4 340 10-374 3-377 (384)
27 4eb5_A Probable cysteine desul 100.0 3E-36 1E-40 285.5 28.0 338 10-373 2-373 (382)
28 3cai_A Possible aminotransfera 100.0 4.8E-35 1.7E-39 279.6 32.4 344 3-368 20-404 (406)
29 3e9k_A Kynureninase; kynurenin 100.0 7.5E-36 2.6E-40 290.3 27.1 349 8-372 67-460 (465)
30 2fyf_A PSAT, phosphoserine ami 100.0 1.7E-34 5.8E-39 275.2 34.9 344 9-372 40-397 (398)
31 3vax_A Putative uncharacterize 100.0 2E-35 6.7E-40 281.7 22.7 340 8-372 20-399 (400)
32 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 1.7E-35 5.9E-40 279.2 20.6 341 6-374 6-371 (371)
33 1qz9_A Kynureninase; kynurenin 100.0 6.2E-34 2.1E-38 272.8 30.8 351 3-375 23-404 (416)
34 1w23_A Phosphoserine aminotran 100.0 1.1E-33 3.8E-38 265.7 30.0 336 9-372 3-359 (360)
35 3f9t_A TDC, L-tyrosine decarbo 100.0 3.4E-33 1.2E-37 265.5 32.5 330 12-371 34-396 (397)
36 3ly1_A Putative histidinol-pho 100.0 1.7E-32 5.9E-37 257.1 36.4 317 16-372 26-351 (354)
37 3ffh_A Histidinol-phosphate am 100.0 4.1E-32 1.4E-36 255.5 35.4 313 16-369 42-362 (363)
38 3tqx_A 2-amino-3-ketobutyrate 100.0 1.1E-32 3.7E-37 262.6 29.2 300 40-375 86-398 (399)
39 3get_A Histidinol-phosphate am 100.0 1.1E-32 3.8E-37 259.5 28.1 313 16-370 40-364 (365)
40 1gd9_A Aspartate aminotransfer 100.0 2.6E-32 8.8E-37 259.3 30.6 323 19-374 39-387 (389)
41 3a9z_A Selenocysteine lyase; P 100.0 1.8E-32 6.1E-37 264.0 27.2 347 3-373 13-428 (432)
42 3euc_A Histidinol-phosphate am 100.0 4.9E-32 1.7E-36 255.3 29.5 313 17-371 41-366 (367)
43 3a2b_A Serine palmitoyltransfe 100.0 6.7E-32 2.3E-36 257.2 30.7 318 20-375 58-394 (398)
44 2w8t_A SPT, serine palmitoyltr 100.0 1.2E-31 4.1E-36 257.8 29.7 301 41-378 108-420 (427)
45 3nra_A Aspartate aminotransfer 100.0 6.7E-32 2.3E-36 257.9 27.5 324 17-373 51-405 (407)
46 1fc4_A 2-amino-3-ketobutyrate 100.0 1.4E-31 4.8E-36 255.2 29.6 318 20-375 60-399 (401)
47 3h14_A Aminotransferase, class 100.0 1.1E-31 3.6E-36 255.2 28.2 323 17-375 42-384 (391)
48 3mad_A Sphingosine-1-phosphate 100.0 1.1E-31 3.6E-36 264.2 29.0 332 39-396 136-491 (514)
49 2z61_A Probable aspartate amin 100.0 3.6E-32 1.2E-36 256.5 24.3 310 20-371 43-369 (370)
50 1b5p_A Protein (aspartate amin 100.0 1.2E-31 4.3E-36 254.2 27.8 318 19-371 44-383 (385)
51 3dzz_A Putative pyridoxal 5'-p 100.0 4.1E-31 1.4E-35 251.0 31.4 326 17-373 38-389 (391)
52 1o4s_A Aspartate aminotransfer 100.0 5.9E-32 2E-36 256.8 25.5 314 19-371 54-387 (389)
53 2o1b_A Aminotransferase, class 100.0 6.4E-32 2.2E-36 257.9 25.0 321 19-372 60-402 (404)
54 3mc6_A Sphingosine-1-phosphate 100.0 1.1E-31 3.7E-36 263.2 27.2 332 39-395 104-461 (497)
55 2x5d_A Probable aminotransfera 100.0 1.6E-31 5.4E-36 255.8 27.8 324 19-375 50-400 (412)
56 3op7_A Aminotransferase class 100.0 3.1E-31 1.1E-35 250.5 28.9 317 22-374 46-372 (375)
57 1v2d_A Glutamine aminotransfer 100.0 1.5E-31 5.1E-36 253.3 26.6 316 19-373 38-371 (381)
58 1j32_A Aspartate aminotransfer 100.0 4.6E-31 1.6E-35 250.5 29.1 321 19-373 43-387 (388)
59 3p1t_A Putative histidinol-pho 100.0 1.2E-30 4E-35 242.8 31.0 306 16-370 26-334 (337)
60 2zyj_A Alpha-aminodipate amino 100.0 5E-32 1.7E-36 258.0 22.1 321 20-373 48-393 (397)
61 3dyd_A Tyrosine aminotransfera 100.0 2.7E-31 9.2E-36 255.3 27.3 321 18-373 70-424 (427)
62 3g0t_A Putative aminotransfera 100.0 4.3E-31 1.5E-35 254.7 28.8 341 17-372 55-436 (437)
63 4dq6_A Putative pyridoxal phos 100.0 2.1E-30 7E-35 246.1 32.5 321 17-370 43-390 (391)
64 2dou_A Probable N-succinyldiam 100.0 1.9E-31 6.4E-36 252.2 25.1 316 20-370 39-375 (376)
65 3kki_A CAI-1 autoinducer synth 100.0 4.4E-31 1.5E-35 252.5 27.8 331 3-376 61-407 (409)
66 1u08_A Hypothetical aminotrans 100.0 5.6E-31 1.9E-35 249.8 27.8 316 19-368 43-385 (386)
67 3fdb_A Beta C-S lyase, putativ 100.0 6.5E-31 2.2E-35 248.4 27.0 318 17-373 34-376 (377)
68 2o0r_A RV0858C (N-succinyldiam 100.0 2.1E-31 7.3E-36 254.8 23.6 320 19-372 38-395 (411)
69 1yiz_A Kynurenine aminotransfe 100.0 3.1E-31 1E-35 255.2 24.7 320 19-371 50-427 (429)
70 1bs0_A Protein (8-amino-7-oxon 100.0 7.8E-31 2.7E-35 248.6 27.1 314 19-369 53-383 (384)
71 3kax_A Aminotransferase, class 100.0 1.7E-30 5.9E-35 246.0 29.4 322 17-370 35-382 (383)
72 3aow_A Putative uncharacterize 100.0 1.2E-30 4.2E-35 252.0 28.8 323 20-373 92-445 (448)
73 3cq5_A Histidinol-phosphate am 100.0 4.1E-30 1.4E-34 242.4 31.7 311 17-371 41-366 (369)
74 2dgk_A GAD-beta, GADB, glutama 100.0 2.1E-30 7.3E-35 250.9 30.2 339 18-373 52-434 (452)
75 2zc0_A Alanine glyoxylate tran 100.0 1E-30 3.6E-35 249.7 27.3 323 20-373 50-404 (407)
76 3hdo_A Histidinol-phosphate am 100.0 7.4E-31 2.5E-35 246.6 25.2 309 17-371 37-353 (360)
77 1vp4_A Aminotransferase, putat 100.0 9.7E-31 3.3E-35 251.4 26.4 325 20-373 59-418 (425)
78 1rv3_A Serine hydroxymethyltra 100.0 1.6E-30 5.5E-35 253.3 28.1 348 9-372 45-430 (483)
79 1xi9_A Putative transaminase; 100.0 4.4E-31 1.5E-35 252.2 22.9 320 19-373 54-403 (406)
80 2gb3_A Aspartate aminotransfer 100.0 8.7E-31 3E-35 250.4 24.5 318 19-373 56-402 (409)
81 3l8a_A METC, putative aminotra 100.0 5.3E-30 1.8E-34 245.9 29.6 324 17-371 72-420 (421)
82 2bwn_A 5-aminolevulinate synth 100.0 4.1E-30 1.4E-34 245.1 28.1 319 20-373 61-400 (401)
83 3ezs_A Aminotransferase ASPB; 100.0 1.3E-30 4.3E-35 246.4 24.3 314 17-372 34-374 (376)
84 1c7n_A Cystalysin; transferase 100.0 7.9E-30 2.7E-34 242.9 29.9 324 18-374 43-394 (399)
85 1svv_A Threonine aldolase; str 100.0 1.5E-30 5.1E-35 244.1 24.1 334 5-373 11-358 (359)
86 3hbx_A GAD 1, glutamate decarb 100.0 1.8E-29 6E-34 247.0 32.1 342 16-375 64-446 (502)
87 1d2f_A MALY protein; aminotran 100.0 2.3E-29 7.8E-34 239.0 31.8 323 18-373 40-389 (390)
88 1bw0_A TAT, protein (tyrosine 100.0 1E-30 3.4E-35 250.6 22.2 326 18-373 49-413 (416)
89 3fvs_A Kynurenine--oxoglutarat 100.0 6E-31 2E-35 252.6 20.3 323 18-372 40-421 (422)
90 2fnu_A Aminotransferase; prote 100.0 1.7E-29 5.7E-34 238.5 29.3 332 17-374 8-373 (375)
91 3b46_A Aminotransferase BNA3; 100.0 5.7E-30 1.9E-34 247.5 26.7 318 19-368 70-442 (447)
92 3vp6_A Glutamate decarboxylase 100.0 1.7E-29 5.7E-34 247.5 29.6 357 9-372 97-504 (511)
93 3jtx_A Aminotransferase; NP_28 100.0 1.2E-29 4.1E-34 241.4 27.4 318 17-370 41-395 (396)
94 3ftb_A Histidinol-phosphate am 100.0 2E-29 7E-34 236.7 28.7 309 17-372 37-360 (361)
95 3rq1_A Aminotransferase class 100.0 2.1E-29 7.3E-34 241.5 29.3 328 15-374 52-416 (418)
96 1fg7_A Histidinol phosphate am 100.0 2.4E-29 8.2E-34 236.0 28.7 284 44-368 60-353 (356)
97 2r2n_A Kynurenine/alpha-aminoa 100.0 7.6E-29 2.6E-33 238.1 32.9 304 40-372 80-423 (425)
98 2vi8_A Serine hydroxymethyltra 100.0 4.2E-29 1.4E-33 238.3 30.4 333 10-373 25-387 (405)
99 3piu_A 1-aminocyclopropane-1-c 100.0 8.8E-30 3E-34 245.4 25.7 337 7-373 37-432 (435)
100 1iay_A ACC synthase 2, 1-amino 100.0 8.8E-30 3E-34 244.9 24.8 299 44-372 85-426 (428)
101 3ele_A Amino transferase; RER0 100.0 3.3E-29 1.1E-33 238.6 28.5 324 19-373 48-396 (398)
102 2x5f_A Aspartate_tyrosine_phen 100.0 6.5E-30 2.2E-34 246.0 23.8 324 21-373 63-429 (430)
103 3qgu_A LL-diaminopimelate amin 100.0 1.1E-29 3.8E-34 245.7 25.6 325 18-372 81-439 (449)
104 3n0l_A Serine hydroxymethyltra 100.0 1.3E-28 4.4E-33 235.8 32.6 355 10-398 27-413 (417)
105 2qma_A Diaminobutyrate-pyruvat 100.0 9.4E-29 3.2E-33 242.1 32.3 351 8-373 100-496 (497)
106 2z67_A O-phosphoseryl-tRNA(SEC 100.0 6E-30 2E-34 247.7 23.3 329 6-370 78-455 (456)
107 3e2y_A Kynurenine-oxoglutarate 100.0 5.1E-30 1.7E-34 245.1 22.1 330 7-368 23-408 (410)
108 1lc5_A COBD, L-threonine-O-3-p 100.0 2.7E-29 9.3E-34 236.3 26.0 312 17-373 35-360 (364)
109 1jg8_A L-ALLO-threonine aldola 100.0 3.6E-29 1.2E-33 233.8 26.7 325 12-372 8-345 (347)
110 3dr4_A Putative perosamine syn 100.0 1.4E-29 4.8E-34 240.6 23.7 337 9-370 23-390 (391)
111 1v72_A Aldolase; PLP-dependent 100.0 1.8E-29 6.1E-34 236.6 23.6 327 9-373 9-353 (356)
112 1wyu_B Glycine dehydrogenase s 100.0 1.8E-28 6.3E-33 238.5 31.3 340 15-372 73-440 (474)
113 4e1o_A HDC, histidine decarbox 100.0 3.8E-29 1.3E-33 243.5 26.5 353 9-373 80-478 (481)
114 2dkj_A Serine hydroxymethyltra 100.0 3.1E-28 1.1E-32 232.4 31.0 333 9-372 24-387 (407)
115 2a7v_A Serine hydroxymethyltra 100.0 2.5E-28 8.6E-33 235.8 30.0 348 9-372 55-440 (490)
116 3ez1_A Aminotransferase MOCR f 100.0 1E-28 3.5E-33 237.1 27.1 331 10-373 27-415 (423)
117 3ppl_A Aspartate aminotransfer 100.0 2.8E-29 9.6E-34 241.3 22.5 299 41-373 77-420 (427)
118 2jis_A Cysteine sulfinic acid 100.0 1.8E-28 6E-33 241.1 28.2 324 38-372 144-514 (515)
119 1wyu_A Glycine dehydrogenase ( 100.0 8.2E-29 2.8E-33 238.8 25.1 308 39-370 105-437 (438)
120 3k40_A Aromatic-L-amino-acid d 100.0 8.2E-29 2.8E-33 240.6 25.2 352 9-373 75-471 (475)
121 1b9h_A AHBA synthase, protein 100.0 5.8E-28 2E-32 229.2 29.9 326 20-372 15-387 (388)
122 3fkd_A L-threonine-O-3-phospha 100.0 4.4E-28 1.5E-32 226.8 27.7 307 16-372 25-341 (350)
123 3uwc_A Nucleotide-sugar aminot 100.0 1.1E-28 3.7E-33 233.0 23.0 333 10-374 8-372 (374)
124 2okj_A Glutamate decarboxylase 100.0 5.9E-28 2E-32 236.8 28.8 320 38-373 128-502 (504)
125 1uu1_A Histidinol-phosphate am 100.0 2.3E-28 7.8E-33 227.4 24.4 301 10-368 22-333 (335)
126 3t18_A Aminotransferase class 100.0 2.3E-28 7.9E-33 233.9 25.1 331 8-373 44-410 (413)
127 3h7f_A Serine hydroxymethyltra 100.0 1.7E-27 5.9E-32 230.0 31.3 356 10-399 47-438 (447)
128 3if2_A Aminotransferase; YP_26 100.0 7.4E-29 2.5E-33 239.6 21.6 303 43-373 84-440 (444)
129 1mdo_A ARNB aminotransferase; 100.0 8E-28 2.7E-32 228.5 28.0 332 17-372 16-385 (393)
130 1js3_A DDC;, DOPA decarboxylas 100.0 2.8E-28 9.6E-33 238.2 25.3 349 10-374 76-475 (486)
131 3d6k_A Putative aminotransfera 100.0 1.5E-28 5.1E-33 235.9 22.8 321 19-373 48-418 (422)
132 3frk_A QDTB; aminotransferase, 100.0 1.7E-29 5.7E-34 238.6 15.7 331 11-372 6-367 (373)
133 2c81_A Glutamine-2-deoxy-scyll 100.0 4.4E-28 1.5E-32 232.3 25.6 339 16-375 10-416 (418)
134 3asa_A LL-diaminopimelate amin 100.0 1.7E-28 5.7E-33 233.9 22.1 324 18-373 45-393 (400)
135 3gbx_A Serine hydroxymethyltra 100.0 2E-27 6.9E-32 227.6 28.8 330 11-373 33-396 (420)
136 2oga_A Transaminase; PLP-depen 100.0 1E-27 3.5E-32 228.4 26.5 331 12-373 34-396 (399)
137 3ei9_A LL-diaminopimelate amin 100.0 6.7E-28 2.3E-32 232.1 25.0 316 18-371 68-426 (432)
138 3nyt_A Aminotransferase WBPE; 100.0 7.3E-28 2.5E-32 226.8 24.4 325 13-369 7-360 (367)
139 2eh6_A Acoat, acetylornithine 100.0 1.4E-27 4.7E-32 225.4 26.0 298 20-369 45-374 (375)
140 3g7q_A Valine-pyruvate aminotr 100.0 1.9E-28 6.5E-33 234.7 20.2 296 42-373 75-413 (417)
141 3ecd_A Serine hydroxymethyltra 100.0 1.3E-26 4.4E-31 222.4 32.8 333 10-373 34-397 (425)
142 3fsl_A Aromatic-amino-acid ami 100.0 7.7E-28 2.6E-32 228.9 24.0 323 9-369 34-396 (397)
143 2aeu_A Hypothetical protein MJ 100.0 2.7E-28 9.2E-33 230.1 20.2 316 10-374 30-372 (374)
144 3ruy_A Ornithine aminotransfer 100.0 3.9E-27 1.3E-31 223.8 27.5 304 20-370 53-391 (392)
145 4f4e_A Aromatic-amino-acid ami 100.0 1.3E-27 4.3E-32 229.3 24.3 324 9-370 57-419 (420)
146 1o69_A Aminotransferase; struc 100.0 5.8E-27 2E-31 222.7 28.5 329 20-371 10-385 (394)
147 1vef_A Acetylornithine/acetyl- 100.0 1.5E-27 5.1E-32 226.9 24.3 306 20-370 62-394 (395)
148 2rfv_A Methionine gamma-lyase; 100.0 7.4E-27 2.5E-31 222.4 28.4 320 9-369 27-396 (398)
149 2x3l_A ORN/Lys/Arg decarboxyla 100.0 6E-28 2.1E-32 232.8 20.8 287 41-374 56-354 (446)
150 1yaa_A Aspartate aminotransfer 100.0 1.7E-27 5.6E-32 227.9 23.3 323 9-373 37-411 (412)
151 2ez2_A Beta-tyrosinase, tyrosi 100.0 1.5E-26 5.2E-31 224.2 30.1 336 7-374 40-432 (456)
152 1ajs_A Aspartate aminotransfer 100.0 2.6E-27 8.8E-32 226.5 24.3 318 18-373 47-411 (412)
153 2cb1_A O-acetyl homoserine sul 100.0 2.4E-26 8.1E-31 219.8 29.9 323 19-368 33-411 (412)
154 2po3_A 4-dehydrase; external a 100.0 4.5E-27 1.6E-31 225.7 25.1 327 17-373 27-386 (424)
155 3tcm_A Alanine aminotransferas 100.0 4.8E-27 1.6E-31 229.8 25.3 302 42-373 134-494 (500)
156 1e5e_A MGL, methionine gamma-l 100.0 2.3E-26 7.8E-31 219.1 29.2 287 41-372 61-394 (404)
157 1s0a_A Adenosylmethionine-8-am 100.0 8.5E-27 2.9E-31 224.2 26.4 322 20-372 60-423 (429)
158 2oat_A Ornithine aminotransfer 100.0 2E-26 6.7E-31 222.0 28.9 309 20-372 93-438 (439)
159 3tfu_A Adenosylmethionine-8-am 100.0 2.7E-27 9.3E-32 228.9 22.4 324 21-374 93-454 (457)
160 3meb_A Aspartate aminotransfer 100.0 9.8E-27 3.3E-31 224.8 26.0 327 8-375 56-446 (448)
161 2ay1_A Aroat, aromatic amino a 100.0 1.6E-27 5.6E-32 226.5 20.1 314 18-369 43-392 (394)
162 2ord_A Acoat, acetylornithine 100.0 3E-27 1E-31 225.0 21.3 308 20-373 57-397 (397)
163 7aat_A Aspartate aminotransfer 100.0 8.1E-27 2.8E-31 222.2 24.3 325 8-370 35-400 (401)
164 4adb_A Succinylornithine trans 100.0 7.1E-27 2.4E-31 222.9 23.9 307 21-373 57-400 (406)
165 3dxv_A Alpha-amino-epsilon-cap 100.0 5.5E-27 1.9E-31 226.1 22.9 323 20-374 60-426 (439)
166 1z7d_A Ornithine aminotransfer 100.0 7.9E-26 2.7E-30 217.4 30.9 310 20-373 82-429 (433)
167 2q7w_A Aspartate aminotransfer 100.0 4.2E-27 1.5E-31 223.8 21.7 314 18-369 43-395 (396)
168 3ju7_A Putative PLP-dependent 100.0 7.5E-27 2.6E-31 220.3 23.2 305 42-372 36-374 (377)
169 3f6t_A Aspartate aminotransfer 100.0 2E-27 6.9E-32 234.0 19.6 342 17-373 113-525 (533)
170 1pff_A Methionine gamma-lyase; 100.0 2.8E-26 9.5E-31 212.8 26.2 283 46-369 2-330 (331)
171 3nx3_A Acoat, acetylornithine 100.0 2.9E-26 9.9E-31 218.0 26.6 309 20-372 53-394 (395)
172 1sff_A 4-aminobutyrate aminotr 100.0 2.1E-26 7.1E-31 221.2 25.8 322 20-373 58-424 (426)
173 3b8x_A WBDK, pyridoxamine 5-ph 99.9 2.6E-25 9E-30 211.0 31.3 328 13-366 6-389 (390)
174 3ihj_A Alanine aminotransferas 99.9 7.5E-26 2.6E-30 221.0 28.2 300 44-373 131-493 (498)
175 1cs1_A CGS, protein (cystathio 99.9 1.4E-25 4.7E-30 212.7 28.8 288 41-369 51-383 (386)
176 3pj0_A LMO0305 protein; struct 99.9 9E-27 3.1E-31 218.5 20.1 320 11-369 16-358 (359)
177 1ibj_A CBL, cystathionine beta 99.9 1.2E-26 4E-31 224.1 21.0 285 42-372 133-461 (464)
178 1gc0_A Methionine gamma-lyase; 99.9 1E-25 3.4E-30 214.5 27.0 317 12-369 31-397 (398)
179 4eu1_A Mitochondrial aspartate 99.9 8.7E-26 3E-30 215.7 26.7 325 6-370 46-408 (409)
180 3b1d_A Betac-S lyase; HET: PLP 99.9 1.4E-29 4.6E-34 240.8 0.0 321 18-371 43-391 (392)
181 3dod_A Adenosylmethionine-8-am 99.9 1.6E-25 5.4E-30 216.4 28.3 325 21-373 62-443 (448)
182 3i4j_A Aminotransferase, class 99.9 8.2E-26 2.8E-30 217.3 25.9 327 21-373 47-428 (430)
183 2pb2_A Acetylornithine/succiny 99.9 2.6E-26 8.8E-31 220.0 22.2 309 20-373 74-418 (420)
184 3a8u_X Omega-amino acid--pyruv 99.9 1.2E-25 4.2E-30 217.3 26.8 327 21-373 68-447 (449)
185 1qgn_A Protein (cystathionine 99.9 1.8E-25 6.1E-30 214.2 27.5 289 40-372 112-444 (445)
186 3lws_A Aromatic amino acid bet 99.9 1.9E-26 6.6E-31 216.2 19.9 321 11-370 13-356 (357)
187 1ax4_A Tryptophanase; tryptoph 99.9 3.5E-26 1.2E-30 222.3 22.0 304 41-373 75-441 (467)
188 3n5m_A Adenosylmethionine-8-am 99.9 1.6E-25 5.5E-30 216.7 26.5 326 21-372 67-451 (452)
189 1c4k_A Protein (ornithine deca 99.9 1.1E-25 3.7E-30 226.7 26.1 310 42-373 173-566 (730)
190 3gju_A Putative aminotransfera 99.9 3.3E-25 1.1E-29 214.9 27.2 328 21-373 69-456 (460)
191 2eo5_A 419AA long hypothetical 99.9 1.6E-25 5.6E-30 214.5 24.8 312 21-373 61-418 (419)
192 1zod_A DGD, 2,2-dialkylglycine 99.9 4.4E-26 1.5E-30 219.4 20.7 326 21-373 61-432 (433)
193 3ndn_A O-succinylhomoserine su 99.9 4.1E-25 1.4E-29 210.6 25.8 288 40-370 79-413 (414)
194 2fq6_A Cystathionine beta-lyas 99.9 7.6E-25 2.6E-29 208.6 27.5 293 40-368 80-413 (415)
195 2vyc_A Biodegradative arginine 99.9 5.9E-25 2E-29 223.3 28.4 306 41-373 204-605 (755)
196 3acz_A Methionine gamma-lyase; 99.9 1E-24 3.6E-29 206.7 27.9 284 41-371 58-387 (389)
197 3oks_A 4-aminobutyrate transam 99.9 5E-25 1.7E-29 213.0 25.8 322 21-372 79-450 (451)
198 4ffc_A 4-aminobutyrate aminotr 99.9 6.2E-25 2.1E-29 212.4 26.3 320 21-373 82-449 (453)
199 3qhx_A Cystathionine gamma-syn 99.9 3.7E-25 1.3E-29 209.9 24.3 288 40-366 64-391 (392)
200 2zy4_A L-aspartate beta-decarb 99.9 8.3E-26 2.8E-30 222.6 20.2 316 60-389 165-541 (546)
201 3cog_A Cystathionine gamma-lya 99.9 1.5E-24 5E-29 206.4 27.8 286 42-370 67-399 (403)
202 3hmu_A Aminotransferase, class 99.9 8E-25 2.7E-29 212.4 25.5 320 21-373 73-452 (472)
203 3i5t_A Aminotransferase; pyrid 99.9 8.7E-25 3E-29 212.4 25.7 324 21-372 72-453 (476)
204 4a6r_A Omega transaminase; tra 99.9 7.4E-25 2.5E-29 212.4 25.2 322 21-373 68-449 (459)
205 3k7y_A Aspartate aminotransfer 99.9 1.6E-24 5.4E-29 205.7 26.7 314 18-372 46-404 (405)
206 3bwn_A AT1G70560, L-tryptophan 99.9 1.1E-25 3.7E-30 213.6 17.8 282 45-372 71-386 (391)
207 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 2.2E-24 7.4E-29 207.8 26.3 330 19-371 40-434 (437)
208 3jzl_A Putative cystathionine 99.9 1.3E-24 4.3E-29 206.1 23.7 283 22-329 32-338 (409)
209 1n8p_A Cystathionine gamma-lya 99.9 1.4E-24 4.7E-29 206.0 23.3 287 41-369 54-391 (393)
210 3ri6_A O-acetylhomoserine sulf 99.9 2.7E-24 9.1E-29 205.5 24.3 299 41-370 81-429 (430)
211 3hvy_A Cystathionine beta-lyas 99.9 7.3E-24 2.5E-28 201.5 26.2 282 22-328 47-354 (427)
212 3i16_A Aluminum resistance pro 99.9 6.6E-24 2.3E-28 201.8 25.9 285 22-329 46-355 (427)
213 2cjg_A L-lysine-epsilon aminot 99.9 9.6E-25 3.3E-29 210.8 20.5 322 20-373 71-448 (449)
214 3l44_A Glutamate-1-semialdehyd 99.9 1.5E-24 5.2E-29 208.8 21.8 312 20-373 72-430 (434)
215 2oqx_A Tryptophanase; lyase, p 99.9 4.9E-25 1.7E-29 214.2 18.4 306 41-374 73-443 (467)
216 3fq8_A Glutamate-1-semialdehyd 99.9 4.2E-24 1.4E-28 205.2 23.7 311 20-372 69-426 (427)
217 3k28_A Glutamate-1-semialdehyd 99.9 1.4E-24 4.8E-29 208.7 17.5 313 20-373 70-427 (429)
218 4e77_A Glutamate-1-semialdehyd 99.9 4.1E-23 1.4E-27 198.4 27.7 312 20-372 70-428 (429)
219 2epj_A Glutamate-1-semialdehyd 99.9 1.8E-23 6.2E-28 201.2 22.2 312 20-373 73-431 (434)
220 3ht4_A Aluminum resistance pro 99.9 1.7E-23 6E-28 199.9 21.6 284 22-329 38-344 (431)
221 2cy8_A D-phgat, D-phenylglycin 99.9 6.1E-23 2.1E-27 198.6 24.0 311 20-373 74-435 (453)
222 2hox_A ALLIIN lyase 1; cystein 99.9 8.6E-24 2.9E-28 202.7 16.3 283 44-371 102-423 (427)
223 2ctz_A O-acetyl-L-homoserine s 99.9 4E-23 1.4E-27 197.8 20.8 304 41-370 57-420 (421)
224 3nmy_A Xometc, cystathionine g 99.9 1.5E-22 5.1E-27 192.0 22.6 213 41-292 66-285 (400)
225 3n75_A LDC, lysine decarboxyla 99.9 7.2E-22 2.5E-26 197.3 27.3 300 41-372 194-559 (715)
226 2e7u_A Glutamate-1-semialdehyd 99.9 8.3E-23 2.8E-27 196.0 19.4 308 20-369 69-423 (424)
227 3ou5_A Serine hydroxymethyltra 99.9 3.4E-21 1.2E-25 178.4 27.1 345 10-371 56-439 (490)
228 4h51_A Aspartate aminotransfer 99.9 3.8E-21 1.3E-25 182.6 25.7 329 10-374 53-418 (420)
229 1ohv_A 4-aminobutyrate aminotr 99.9 1.3E-21 4.3E-26 189.9 22.1 329 6-373 60-471 (472)
230 4atq_A 4-aminobutyrate transam 99.9 2.9E-20 9.9E-25 178.1 28.1 324 20-373 81-455 (456)
231 2yky_A Beta-transaminase; tran 99.8 6E-24 2.1E-28 204.1 0.0 314 20-373 117-460 (465)
232 3hl2_A O-phosphoseryl-tRNA(SEC 99.9 6.2E-20 2.1E-24 170.8 25.5 291 54-374 128-462 (501)
233 4ao9_A Beta-phenylalanine amin 99.9 1.3E-20 4.6E-25 179.6 21.1 315 20-375 104-448 (454)
234 3bc8_A O-phosphoseryl-tRNA(SEC 99.9 2.2E-19 7.5E-24 169.5 26.5 304 40-372 96-442 (450)
235 4e3q_A Pyruvate transaminase; 99.8 8.1E-19 2.8E-23 168.7 26.4 327 20-373 84-468 (473)
236 4a0g_A Adenosylmethionine-8-am 99.7 2E-17 6.9E-22 169.3 15.1 327 21-374 399-829 (831)
237 2z8u_A Tata-box-binding protei 75.9 30 0.001 28.0 11.8 88 283-375 85-187 (188)
238 1mp9_A Tata-binding protein; t 67.1 48 0.0017 27.0 9.8 90 282-376 84-188 (198)
239 3o2i_A Uncharacterized protein 64.9 16 0.00055 25.5 5.4 25 342-366 92-116 (125)
240 1ais_A TBP, protein (tata-bind 62.4 59 0.002 26.1 10.0 87 282-373 80-181 (182)
241 3dm5_A SRP54, signal recogniti 58.5 1.2E+02 0.004 28.3 13.6 28 344-371 397-424 (443)
242 2jr2_A UPF0352 protein CPS_261 56.2 15 0.00052 24.3 3.8 43 353-395 6-49 (76)
243 3dr5_A Putative O-methyltransf 54.5 89 0.003 25.7 10.0 123 42-179 39-166 (221)
244 1wzu_A Quinolinate synthetase 53.0 64 0.0022 28.2 8.5 85 83-176 137-231 (300)
245 2gjh_A Designed protein; oblig 49.3 40 0.0014 20.2 4.6 30 345-375 3-32 (62)
246 3kts_A Glycerol uptake operon 48.8 15 0.0005 30.0 3.6 51 122-181 18-68 (192)
247 3ezx_A MMCP 1, monomethylamine 45.7 1.2E+02 0.0042 24.9 9.0 86 85-177 93-185 (215)
248 4g81_D Putative hexonate dehyd 44.0 86 0.0029 26.6 8.0 98 63-164 11-115 (255)
249 3m6w_A RRNA methylase; rRNA me 42.2 2.2E+02 0.0075 26.6 12.0 96 48-153 90-186 (464)
250 3guy_A Short-chain dehydrogena 41.5 1.4E+02 0.0049 24.3 9.2 76 63-145 4-80 (230)
251 3m4x_A NOL1/NOP2/SUN family pr 40.3 2.3E+02 0.008 26.4 11.0 96 49-153 95-191 (456)
252 4fgs_A Probable dehydrogenase 40.0 88 0.003 26.9 7.5 95 63-164 32-132 (273)
253 2juz_A UPF0352 protein HI0840; 39.0 57 0.002 21.9 4.6 43 353-395 6-50 (80)
254 2yxb_A Coenzyme B12-dependent 37.9 1.4E+02 0.0048 23.1 8.1 69 99-176 38-107 (161)
255 3lyl_A 3-oxoacyl-(acyl-carrier 37.4 1.7E+02 0.0059 24.0 9.0 82 63-148 8-93 (247)
256 3r3h_A O-methyltransferase, SA 36.6 1.8E+02 0.0062 24.1 9.0 108 63-181 64-175 (242)
257 3uf0_A Short-chain dehydrogena 36.5 1.5E+02 0.005 25.2 8.5 79 63-147 34-116 (273)
258 3f9i_A 3-oxoacyl-[acyl-carrier 36.3 1.8E+02 0.0061 23.9 8.9 75 63-145 17-92 (249)
259 1qys_A TOP7; alpha-beta, novel 36.2 88 0.003 20.8 5.1 32 343-375 45-76 (106)
260 3c3y_A Pfomt, O-methyltransfer 34.8 1.9E+02 0.0065 23.8 10.4 107 62-179 73-184 (237)
261 4h1h_A LMO1638 protein; MCCF-l 34.4 1.8E+02 0.0062 25.6 8.8 74 80-156 8-97 (327)
262 2bmm_A Thermostable hemoglobin 34.3 32 0.0011 25.4 3.3 41 353-393 77-117 (123)
263 3tla_A MCCF; serine protease, 34.2 1.9E+02 0.0064 26.2 8.9 73 80-155 39-127 (371)
264 3lzd_A DPH2; diphthamide biosy 33.9 1E+02 0.0035 27.9 7.1 82 117-204 37-119 (378)
265 4e5s_A MCCFLIKE protein (BA_56 33.5 1.9E+02 0.0064 25.6 8.7 74 80-156 8-97 (331)
266 4iin_A 3-ketoacyl-acyl carrier 33.0 1.8E+02 0.006 24.5 8.4 81 63-147 32-117 (271)
267 3h7a_A Short chain dehydrogena 32.9 2.1E+02 0.0072 23.7 8.8 80 63-146 10-92 (252)
268 1y80_A Predicted cobalamin bin 32.0 2E+02 0.0067 23.3 8.2 70 99-177 108-179 (210)
269 2i2x_B MTAC, methyltransferase 31.7 2.2E+02 0.0076 24.0 8.7 85 84-177 123-212 (258)
270 2bkm_A Truncated hemoglobin fr 31.6 54 0.0019 24.3 4.2 40 353-392 79-118 (128)
271 1tks_A 3,4-dihydroxy-2-butanon 31.2 42 0.0014 27.5 3.7 36 137-174 159-194 (204)
272 1pjq_A CYSG, siroheme synthase 30.8 90 0.0031 29.2 6.5 92 62-177 14-106 (457)
273 3tfo_A Putative 3-oxoacyl-(acy 30.8 2E+02 0.0067 24.3 8.3 86 63-151 6-95 (264)
274 3rwb_A TPLDH, pyridoxal 4-dehy 30.8 1.5E+02 0.0052 24.5 7.5 94 63-163 9-108 (247)
275 3gi1_A LBP, laminin-binding pr 30.2 2.4E+02 0.0082 24.2 8.8 77 83-173 178-255 (286)
276 3sr3_A Microcin immunity prote 30.0 2.5E+02 0.0085 24.9 9.0 73 80-155 9-97 (336)
277 3rkr_A Short chain oxidoreduct 29.9 1.9E+02 0.0064 24.2 8.0 79 63-146 32-115 (262)
278 3grp_A 3-oxoacyl-(acyl carrier 29.8 1.2E+02 0.0043 25.5 6.9 78 63-147 30-111 (266)
279 1ccw_A Protein (glutamate muta 29.6 1.8E+02 0.006 21.8 7.6 71 99-178 23-94 (137)
280 3ujp_A Mn transporter subunit; 29.4 1.7E+02 0.0057 25.7 7.6 62 102-172 203-265 (307)
281 2jpq_A UPF0352 protein VP2129; 28.7 81 0.0028 21.3 4.0 43 353-395 6-50 (83)
282 2juw_A UPF0352 protein SO_2176 28.6 82 0.0028 21.2 4.0 43 353-395 6-50 (80)
283 3rd5_A Mypaa.01249.C; ssgcid, 28.5 1.7E+02 0.0059 24.9 7.7 74 63-144 19-93 (291)
284 4dqx_A Probable oxidoreductase 28.4 2.1E+02 0.0073 24.2 8.2 83 63-151 30-115 (277)
285 3pxx_A Carveol dehydrogenase; 28.1 2E+02 0.0067 24.3 7.9 97 63-163 13-125 (287)
286 3rpc_A Possible metal-dependen 27.9 2.7E+02 0.0091 23.3 10.0 78 84-165 160-246 (264)
287 3mfq_A TROA, high-affinity zin 27.8 49 0.0017 28.7 3.8 80 84-173 162-242 (282)
288 3u81_A Catechol O-methyltransf 27.6 2.4E+02 0.0082 22.7 9.6 149 19-179 20-173 (221)
289 3r1i_A Short-chain type dehydr 27.2 2.2E+02 0.0077 24.0 8.1 82 63-148 35-120 (276)
290 3i6i_A Putative leucoanthocyan 27.2 2.4E+02 0.0081 24.6 8.5 91 63-165 13-108 (346)
291 4fn4_A Short chain dehydrogena 26.9 1.7E+02 0.0057 24.8 7.0 65 64-131 10-76 (254)
292 1s69_A Cyanoglobin, hemoglobin 26.8 28 0.00097 25.7 1.8 37 354-390 79-115 (124)
293 1dlw_A Hemoglobin; oxygen stor 26.7 32 0.0011 25.1 2.1 38 353-390 72-109 (116)
294 1vd2_A Protein kinase C, IOTA 26.4 1.6E+02 0.0056 20.3 6.2 55 307-367 16-75 (89)
295 4fc7_A Peroxisomal 2,4-dienoyl 26.2 2.9E+02 0.01 23.2 8.7 80 63-146 30-114 (277)
296 3sju_A Keto reductase; short-c 26.2 2.3E+02 0.008 23.9 8.0 83 63-149 27-113 (279)
297 3osu_A 3-oxoacyl-[acyl-carrier 26.1 2.7E+02 0.0092 22.9 8.3 80 63-146 7-91 (246)
298 3two_A Mannitol dehydrogenase; 26.1 1.8E+02 0.0062 25.6 7.5 46 72-117 165-210 (348)
299 4dmm_A 3-oxoacyl-[acyl-carrier 26.0 2.8E+02 0.0095 23.3 8.4 82 63-148 31-117 (269)
300 1ux8_A YJBI protein; oxygen st 25.7 59 0.002 24.3 3.5 39 353-391 80-118 (132)
301 3l6e_A Oxidoreductase, short-c 25.5 2.4E+02 0.0083 23.0 7.8 79 63-148 6-88 (235)
302 4eso_A Putative oxidoreductase 25.4 2.4E+02 0.0082 23.4 7.9 63 63-131 11-74 (255)
303 3tjr_A Short chain dehydrogena 25.4 2.6E+02 0.0089 23.9 8.3 85 63-151 34-122 (301)
304 2jrx_A UPF0352 protein YEJL; h 25.3 77 0.0026 21.4 3.4 43 353-395 6-50 (83)
305 3is3_A 17BETA-hydroxysteroid d 25.0 2.5E+02 0.0086 23.5 8.0 99 63-164 20-125 (270)
306 3gvc_A Oxidoreductase, probabl 24.9 2.1E+02 0.0072 24.2 7.5 79 63-148 32-114 (277)
307 3u7q_B Nitrogenase molybdenum- 24.7 1.5E+02 0.0051 28.3 6.9 75 40-116 321-396 (523)
308 4gud_A Imidazole glycerol phos 24.7 1.3E+02 0.0044 24.3 5.8 48 85-148 3-51 (211)
309 4e6p_A Probable sorbitol dehyd 24.5 3E+02 0.01 22.8 8.7 79 63-148 11-93 (259)
310 3keo_A Redox-sensing transcrip 24.5 93 0.0032 25.6 4.7 110 44-177 68-180 (212)
311 3ijr_A Oxidoreductase, short c 24.3 1.9E+02 0.0066 24.7 7.2 65 63-131 50-117 (291)
312 4ibo_A Gluconate dehydrogenase 24.3 2.4E+02 0.0083 23.7 7.7 81 63-147 29-113 (271)
313 3m6i_A L-arabinitol 4-dehydrog 24.2 1.9E+02 0.0064 25.7 7.3 38 79-116 175-213 (363)
314 4b79_A PA4098, probable short- 24.1 2.5E+02 0.0085 23.5 7.5 70 63-143 14-84 (242)
315 3n74_A 3-ketoacyl-(acyl-carrie 23.5 2.1E+02 0.0073 23.7 7.2 76 63-145 12-91 (261)
316 3umo_A 6-phosphofructokinase i 23.3 3.5E+02 0.012 23.1 10.6 19 156-176 149-167 (309)
317 2qrw_A Hemoglobin-like protein 23.1 66 0.0023 23.8 3.3 44 353-396 79-125 (128)
318 2xyk_A 2-ON-2 hemoglobin; oxyg 22.9 63 0.0022 24.3 3.2 39 353-391 84-122 (133)
319 3ftp_A 3-oxoacyl-[acyl-carrier 22.7 2.7E+02 0.0092 23.4 7.7 81 63-146 30-114 (270)
320 2kfp_A Pspto_3016 protein; alp 22.6 1.7E+02 0.0057 21.7 5.4 40 323-364 71-110 (125)
321 3ju3_A Probable 2-oxoacid ferr 22.6 1.5E+02 0.0053 21.5 5.2 50 83-132 12-64 (118)
322 3u5t_A 3-oxoacyl-[acyl-carrier 22.5 2.8E+02 0.0096 23.2 7.8 80 63-146 30-114 (267)
323 3imf_A Short chain dehydrogena 22.5 2.5E+02 0.0086 23.3 7.4 81 63-146 8-92 (257)
324 3dfz_A SIRC, precorrin-2 dehyd 22.4 1.8E+02 0.0062 24.0 6.2 46 62-109 33-78 (223)
325 4gqr_A Pancreatic alpha-amylas 22.3 49 0.0017 30.9 3.0 30 146-177 69-98 (496)
326 1dly_A Hemoglobin; oxygen stor 22.3 57 0.0019 25.7 2.9 45 354-398 118-162 (164)
327 3aq9_A Group 1 truncated hemog 22.1 42 0.0014 24.6 2.0 38 353-390 77-114 (121)
328 3cmq_A Phenylalanyl-tRNA synth 21.8 3.3E+02 0.011 25.0 8.4 66 309-376 331-412 (415)
329 4egf_A L-xylulose reductase; s 21.7 3.5E+02 0.012 22.5 9.8 82 63-148 22-109 (266)
330 3qiv_A Short-chain dehydrogena 21.7 2.4E+02 0.0083 23.2 7.1 65 63-131 12-78 (253)
331 3l77_A Short-chain alcohol deh 21.7 3.2E+02 0.011 22.0 9.1 96 63-162 5-107 (235)
332 2abq_A Fructose 1-phosphate ki 21.5 3.8E+02 0.013 22.8 10.2 19 156-176 144-162 (306)
333 3v2g_A 3-oxoacyl-[acyl-carrier 21.4 3.6E+02 0.012 22.6 8.4 80 63-146 34-118 (271)
334 3hh1_A Tetrapyrrole methylase 21.3 2.3E+02 0.008 20.3 7.5 100 7-114 5-115 (117)
335 4da9_A Short-chain dehydrogena 21.3 3.2E+02 0.011 23.0 7.9 79 63-146 32-116 (280)
336 3hh8_A Metal ABC transporter s 21.2 3.2E+02 0.011 23.6 7.8 75 85-173 184-259 (294)
337 1vc3_B L-aspartate-alpha-decar 21.2 19 0.00065 25.4 -0.1 39 76-119 50-88 (96)
338 2q3l_A Uncharacterized protein 21.1 59 0.002 24.1 2.6 33 343-375 19-51 (126)
339 2c07_A 3-oxoacyl-(acyl-carrier 20.6 3.7E+02 0.013 22.6 8.2 80 63-146 47-130 (285)
340 3ppi_A 3-hydroxyacyl-COA dehyd 20.5 3.8E+02 0.013 22.4 9.3 64 63-132 33-97 (281)
341 3i4f_A 3-oxoacyl-[acyl-carrier 20.5 2E+02 0.0069 23.9 6.4 65 63-131 10-77 (264)
342 3op4_A 3-oxoacyl-[acyl-carrier 20.4 3.4E+02 0.012 22.3 7.8 79 63-147 12-93 (248)
343 1yb1_A 17-beta-hydroxysteroid 20.4 3.2E+02 0.011 22.8 7.7 79 63-146 34-117 (272)
344 3ucx_A Short chain dehydrogena 20.4 2.3E+02 0.0077 23.7 6.7 65 63-131 14-80 (264)
345 3oid_A Enoyl-[acyl-carrier-pro 20.2 2.1E+02 0.0071 23.9 6.4 80 63-146 7-91 (258)
346 3ezl_A Acetoacetyl-COA reducta 20.1 3.6E+02 0.012 22.1 7.9 80 63-146 15-100 (256)
347 3gaf_A 7-alpha-hydroxysteroid 20.1 3E+02 0.01 22.8 7.4 80 63-146 14-98 (256)
348 1vhx_A Putative holliday junct 20.1 1.7E+02 0.0058 22.4 5.2 55 120-179 41-101 (150)
349 2ksc_A Cyanoglobin; hemeprotei 20.1 43 0.0015 24.7 1.6 36 354-389 78-113 (123)
350 1zl0_A Hypothetical protein PA 20.0 3.8E+02 0.013 23.4 8.0 74 80-156 13-99 (311)
No 1
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=100.00 E-value=1.8e-45 Score=352.37 Aligned_cols=380 Identities=24% Similarity=0.406 Sum_probs=323.3
Q ss_pred CCCcccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCe
Q 015729 7 PGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDR 86 (401)
Q Consensus 7 ~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~ 86 (401)
+...++|.|||.++++++++++.+....++.+.+.+...++++.+++++|.+.++.+++++|+++|++.++.+++++||+
T Consensus 11 ~~~~~~~~pgp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~ 90 (411)
T 3nnk_A 11 PPSRLLMGPGPINADPRVLRAMSSQLIGQYDPAMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRPGDK 90 (411)
T ss_dssp CCCCEEESSSCCCCCHHHHHHHTSCCCCTTCHHHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHCCTTCE
T ss_pred CccceeecCCCCCCCHHHHHHhhccccccccHHHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhcCCCCE
Confidence 44679999999999999999999976666666777889999999999999987666888999999999999999999999
Q ss_pred EEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhc
Q 015729 87 IISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEY 166 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~ 166 (401)
|+++.++|++..+...++..|++++.++.+.++.+|++++++++++ +++++|++++++||||.+.|+++|.++|++
T Consensus 91 Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~v~~~~~~nptG~~~~l~~i~~l~~~- 166 (411)
T 3nnk_A 91 VLVPVFGRFGHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKR---IRPRLLLTVQGDTSTTMLQPLAELGEICRR- 166 (411)
T ss_dssp EEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHH---HCCSEEEEESEETTTTEECCCTTHHHHHHH-
T ss_pred EEEecCCchHHHHHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhh---CCCeEEEEeCCCCCcceeccHHHHHHHHHH-
Confidence 9999999988655677888999999999988888999999999985 256999999999999999999999999999
Q ss_pred CCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCC------------------CC
Q 015729 167 RHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAK------------------SV 228 (401)
Q Consensus 167 ~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~------------------~~ 228 (401)
+|+++|+|++|+.+..+++....++|++++|+||+++++.|+|+++++++..+.+.... ..
T Consensus 167 -~~~~li~Dea~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~ 245 (411)
T 3nnk_A 167 -YDALFYTDATASLGGNPLETDVWGLDAVSAGMQKCLGGPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIY 245 (411)
T ss_dssp -HTCEEEEECTTTBTTBCCCTTTTTCSEEECCSTTTTCCCSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCS
T ss_pred -cCCEEEEECCcccCCcccchhccCCcEEEecCccccCCCCceEEEEECHHHHHHHhhcccccccccccccccccCCCCc
Confidence 99999999999998888888888899999999999888899999999999988776543 22
Q ss_pred ccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCcee
Q 015729 229 RVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTV 308 (401)
Q Consensus 229 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~ 308 (401)
..+.+............+..++++...++++.++++.+.+.|+++..+++.++++++.+.|+++|+++..+... ..+.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~~ 324 (411)
T 3nnk_A 246 SNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAMGLETFGDLKH-KMNNV 324 (411)
T ss_dssp CSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGG-BCSSE
T ss_pred ccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCEeCCCccc-ccccE
Confidence 33444443333332333456678898899999999988888889999999999999999999988887764322 34568
Q ss_pred EEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEee-cccCCHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHH
Q 015729 309 TAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGH-LGHLNELQLLGCLAGVEMILKDVGYPVKLGSGVAAAS 387 (401)
Q Consensus 309 ~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~-~~~~~~~di~~~~~~i~~~l~~~~~~~~~~~~~~~~~ 387 (401)
+++.+|++.+..++.+.|.+++||.+++|+....++++||++ ....+++|+++++++|++++++++.+...+.++.+|.
T Consensus 325 ~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 404 (411)
T 3nnk_A 325 LGVVIPQGINGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLKFPTTQGAAMQAAW 404 (411)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTCCCCTTHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcCCCCCccHHHHHHH
Confidence 888887777889999999877799999987666678999997 4456899999999999999999999888888899988
Q ss_pred HHHHc
Q 015729 388 AYLQN 392 (401)
Q Consensus 388 ~~~~~ 392 (401)
+.|.+
T Consensus 405 ~~~~~ 409 (411)
T 3nnk_A 405 DHYRS 409 (411)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 88754
No 2
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=100.00 E-value=1.2e-45 Score=351.49 Aligned_cols=388 Identities=25% Similarity=0.388 Sum_probs=319.2
Q ss_pred CCCCCCCCCcccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc
Q 015729 1 MDYMYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT 80 (401)
Q Consensus 1 ~~~~~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~ 80 (401)
|+|+......|++.++|.+.++.+++++.+....+.++...+...++++.+++++|.++ +.+++++|+|+|+..++.++
T Consensus 1 ~~fp~~~~~~yl~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~-~~v~~t~g~t~a~~~~~~~~ 79 (392)
T 2z9v_A 1 MRYPEHADPVITLTAGPVNAYPEVLRGLGRTVLYDYDPAFQLLYEKVVDKAQKAMRLSN-KPVILHGEPVLGLEAAAASL 79 (392)
T ss_dssp CCCCTTSCCSEECSSSCCCCCHHHHHHTTSCCCCTTSHHHHHHHHHHHHHHHHHTTCSS-CCEEESSCTHHHHHHHHHHH
T ss_pred CCcccCCCcceeecCCCcCCCHHHHHHHhccccccccHHHHHHHHHHHHHHHHHhCCCC-CEEEEeCCchHHHHHHHHHh
Confidence 89999999999999999999999999999977665555566778999999999999874 45999999999999999888
Q ss_pred CCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHH
Q 015729 81 LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVR 160 (401)
Q Consensus 81 ~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~ 160 (401)
+++||+|+++.++|++..+...++..|++++.++.+.++.+|++++++++++. ++++++++++++||||.+.|+++|.
T Consensus 80 ~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~--~~~~~v~~~~~~nptG~~~~l~~i~ 157 (392)
T 2z9v_A 80 ISPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAH--PEITVVSVCHHDTPSGTINPIDAIG 157 (392)
T ss_dssp CCTTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHC--TTCCEEEEESEEGGGTEECCHHHHH
T ss_pred cCCCCEEEEecCCcccHHHHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcC--CCCcEEEEeccCCCCceeccHHHHH
Confidence 99999999999999887555666778999999999888789999999999642 3679999999999999999999999
Q ss_pred HHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCC--CccccchHHHH
Q 015729 161 KLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKS--VRVFFDWKDYI 238 (401)
Q Consensus 161 ~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~--~~~~~~~~~~~ 238 (401)
++|++ +|+++|+|++|+.+..+++....++|++++|.||++++++|+|+++++++..+++..... ...+.++....
T Consensus 158 ~l~~~--~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~ 235 (392)
T 2z9v_A 158 ALVSA--HGAYLIVDAVSSFGGMKTHPEDCKADIYVTGPNKCLGAPPGLTMMGVSERAWAKMKANPLAPRASMLSIVDWE 235 (392)
T ss_dssp HHHHH--TTCEEEEECTTTBTTBSCCGGGGTCSEEEECSSSTTCCCSCCEEEEECHHHHHHHHTCTTSCCSSTTCSGGGT
T ss_pred HHHHH--cCCeEEEEcccccCCcccccccccceEEEecCcccccCCCceeEEEECHHHHHHhhhccCCCCceeccHHHHH
Confidence 99999 999999999999887776666667999999999998888999999999998887754321 00122211111
Q ss_pred HHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCC
Q 015729 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHIN 318 (401)
Q Consensus 239 ~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (401)
..+.......++++...++++.++++.+.+.|+++..+++.++++++.+.|+++|+++..+.+....+.++++.+|++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (392)
T 2z9v_A 236 NAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAMGLSVWAASDSIASPTTTAVRTPDGVD 315 (392)
T ss_dssp TTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCTTEEEEECCTTCC
T ss_pred hhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcCCeeccCCccccCCceEEEECCCCCC
Confidence 11111123355788888888889999888777889999999999999999998887776522212345577888876678
Q ss_pred HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecc-cCCHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHcc
Q 015729 319 SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG-HLNELQLLGCLAGVEMILKDVGYPVKLGSGVAAASAYLQNN 393 (401)
Q Consensus 319 ~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~-~~~~~di~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~ 393 (401)
..++.+.|.+++||.+.++..+..++++||++++ .++++|+++++++|++++++++.+++.+.+++++.+.++.|
T Consensus 316 ~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (392)
T 2z9v_A 316 EKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMNAAGRKLAIGKGIEAALAVIDAD 391 (392)
T ss_dssp HHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHHHcCCCccccHHHHHHHHHHhcc
Confidence 8899999987669999988654456789999665 78999999999999999999999999999999999888765
No 3
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=100.00 E-value=3.1e-44 Score=344.32 Aligned_cols=380 Identities=26% Similarity=0.456 Sum_probs=321.3
Q ss_pred CCCcccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCe
Q 015729 7 PGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDR 86 (401)
Q Consensus 7 ~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~ 86 (401)
+...++|+|+|.++++++++++.+....+..+...+...++++.+++++|.+++..+++++|+|+|+..++.+++++||+
T Consensus 9 ~~~~~~~~p~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~ 88 (416)
T 3isl_A 9 TPLRTIMTPGPVEVDPRVLRVMSTPVVGQFDPAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDD 88 (416)
T ss_dssp CCCCEECSSSSCCCCHHHHHHTTSCCCCTTSHHHHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCTTCE
T ss_pred cccceeecCCCcCcCHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcCCCCE
Confidence 45678999999999999999999865555556667889999999999999987653458999999999999999999999
Q ss_pred EEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhc
Q 015729 87 IISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEY 166 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~ 166 (401)
|+++.++|++..+...++..|++++.++.+.++.+|++++++++++ +++++|++++++||||.+.|+++|.++|++
T Consensus 89 Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~v~~~~~~nptG~~~~l~~i~~l~~~- 164 (416)
T 3isl_A 89 VLIPIYGRFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIKK---VKPKIVAMVHGETSTGRIHPLKAIGEACRT- 164 (416)
T ss_dssp EEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHH---HCCSEEEEESEETTTTEECCCHHHHHHHHH-
T ss_pred EEEecCCcccHHHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhh---CCCcEEEEEccCCCCceecCHHHHHHHHHH-
Confidence 9999999988666677888999999999998888999999999984 246999999999999999999999999999
Q ss_pred CCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCC--------------------
Q 015729 167 RHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAK-------------------- 226 (401)
Q Consensus 167 ~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~-------------------- 226 (401)
+|+++|+|++|+.+..+++....++|++++|+||++.++.|+|++++++++.+.+...+
T Consensus 165 -~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~l~g~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~ 243 (416)
T 3isl_A 165 -EDALFIVDAVATIGGCEVKVDEWKIDAAIGGTQKCLSVPSGMAPITYNERVADVIAARKKVERGIATQADRAALSGNRP 243 (416)
T ss_dssp -TTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCCCSSEEEEEECHHHHHHHHTC------------------CCC
T ss_pred -cCCEEEEECCccccCCCcchhhcCCCEEEecCccccCCCCCeEEEEECHHHHHHhhccccccccccccccchhccCCCC
Confidence 99999999999998888888888899999999999888999999999999988876532
Q ss_pred CCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCc
Q 015729 227 SVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSD 306 (401)
Q Consensus 227 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 306 (401)
....+.+...+........+..++++...++++.++++.+...|+++..+++.++++++.+.|+++|+++..+.. ...+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~ 322 (416)
T 3isl_A 244 ITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAMGLRLFGDDS-CKMP 322 (416)
T ss_dssp CSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGG-GBCT
T ss_pred CCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCEeccCcc-ccCC
Confidence 223344444443333333344667888888999999998888888999999999999999999998888776543 2345
Q ss_pred eeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHH-HHHHHHHHHHHHHhcCCCCCcchHHHH
Q 015729 307 TVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQ-LLGCLAGVEMILKDVGYPVKLGSGVAA 385 (401)
Q Consensus 307 ~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~d-i~~~~~~i~~~l~~~~~~~~~~~~~~~ 385 (401)
.++++.+|++.+..++.+.|.+++||.+.+|..+..++++||++..+.+++| +++++++|++++++++...+.+.++++
T Consensus 323 ~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~~~~~~~~~~~~~ 402 (416)
T 3isl_A 323 VVTCVEIPGGIDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRHNAGIEAGKALQA 402 (416)
T ss_dssp TEEEEECCTTCCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTCCCCTTHHHHH
T ss_pred cEEEEeCCCCCCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHcCCCcccchHHHH
Confidence 6788888777788999999987779999998766667899999877677766 999999999999999999999888988
Q ss_pred HHHHHHc
Q 015729 386 ASAYLQN 392 (401)
Q Consensus 386 ~~~~~~~ 392 (401)
+.+.|.+
T Consensus 403 ~~~~~~~ 409 (416)
T 3isl_A 403 ALDVYEN 409 (416)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 8887744
No 4
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=100.00 E-value=5.1e-44 Score=339.03 Aligned_cols=374 Identities=29% Similarity=0.468 Sum_probs=314.9
Q ss_pred CcccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCC-ceEEecCChhHHHHHHHhccCCCCCeE
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSG-TPFLIPTTGTGAWESALTNTLSPGDRI 87 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-~~i~~~~g~t~a~~~~~~~~~~~gd~v 87 (401)
..++|.|||.++++++++++.+....+..+...+...++++.+++++|.+.+ +++++++|+++|+. ++.+++++||+|
T Consensus 2 ~~~~~~~gp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~v 80 (384)
T 3zrp_A 2 DKLLLHVGPTTIKEDVLVAGLENNVGFTSKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLLKPNDKI 80 (384)
T ss_dssp ----CCSSCSCCCHHHHHHTTCCSCCTTSHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEE
T ss_pred CceeccCCCCCCCHHHHHHhhccccccccHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEE
Confidence 3579999999999999999999776666667778899999999999999763 56999999999999 998999999999
Q ss_pred EEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcC
Q 015729 88 ISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYR 167 (401)
Q Consensus 88 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~ 167 (401)
+++.++|++..+...++..|++++.++.+.++.+|++++++++++ ++++++++++++||||.+.|+++|.++|++
T Consensus 81 i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~v~~~~~~nptG~~~~l~~i~~l~~~-- 155 (384)
T 3zrp_A 81 LVVSNGVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRK---SEYKLVALTHVETSTGVREPVKDVINKIRK-- 155 (384)
T ss_dssp EEECSSHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHH---SCEEEEEEESEETTTTEECCHHHHHHHHGG--
T ss_pred EEecCCcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHh---CCCcEEEEeCCCCCCceECcHHHHHHHHHh--
Confidence 999999888666677788999999999998888999999999986 357999999999999999999999999999
Q ss_pred CCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHh-ccCCCCccccchHHHH---HHhhc
Q 015729 168 HPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEAS-KTAKSVRVFFDWKDYI---KFYNL 243 (401)
Q Consensus 168 ~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~ 243 (401)
+|+++|+|++|+.+..+.+....++|++++|.||+++++.|+|+++++++.++.+ .+.....++.+..... ..++.
T Consensus 156 ~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (384)
T 3zrp_A 156 YVELIVVDGVSSVGAEEVKAEEWNVDVYLTASQKALGSAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEE 235 (384)
T ss_dssp GEEEEEEECTTTTTTSCCCTTTTTCSEEEEETTSTTCCCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHT
T ss_pred cCCEEEEECcccccCccccccccCCCEEEecCcccccCCCceEEEEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcc
Confidence 9999999999999888888877889999999999998889999999999998887 5544444455444333 33443
Q ss_pred CCCCC-CCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHH
Q 015729 244 GTFWP-YTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEI 322 (401)
Q Consensus 244 g~~~~-~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 322 (401)
|..+. ++++...++++.++++.+...++++..++++++++++.+.|+++|+++..+.+....+.++++.++. .+..++
T Consensus 236 ~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 314 (384)
T 3zrp_A 236 GKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEALGLEIVARRPESYSNTVTGVILKV-ADPQKV 314 (384)
T ss_dssp TCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSCSSGGGBCSSEEEEECSS-SCHHHH
T ss_pred cCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCeEccCcccccCccEEEEECCC-CCHHHH
Confidence 22223 3788888889999999888888899999999999999999999888877654233455677888865 678899
Q ss_pred HHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHH
Q 015729 323 VRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGYPVKLGSGVAAASAYLQ 391 (401)
Q Consensus 323 ~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 391 (401)
.+.|.++ ||.+.+|..... +++|+++...++++|+++++++|++++++++...+.+.++.++.+-|.
T Consensus 315 ~~~l~~~-gi~v~~g~~~~~-~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 381 (384)
T 3zrp_A 315 LAGTVNE-GVEFAPGVHPAF-KYFRIGHMGWVTPNDAIIAISVIERTLRKLGEPIRFGEGVKAVEEVLF 381 (384)
T ss_dssp HHHHHTT-TCCCEECCCTTC-CEEEEECCSSCCHHHHHHHHHHHHHHHHHHTCCCCTTCHHHHHHHHHH
T ss_pred HHHHHHC-CEEEecCCCCCc-CEEEEeccccCCHHHHHHHHHHHHHHHHHcCCCcCcchHHHHHHHHHh
Confidence 9999877 999988864322 789999888899999999999999999999999999999888887764
No 5
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=100.00 E-value=1.2e-42 Score=330.55 Aligned_cols=363 Identities=26% Similarity=0.366 Sum_probs=305.3
Q ss_pred CCCcccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCe
Q 015729 7 PGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDR 86 (401)
Q Consensus 7 ~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~ 86 (401)
+...++|.|||..+++++++++.+....+..+.+.+...++++.++++++.+.++.+++++|+++|+..++.+++++||+
T Consensus 21 ~~~~~~~~p~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~~gd~ 100 (393)
T 3kgw_A 21 VPTRLLLGPGPSNLAPRVLAAGSLRMIGHMQKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDS 100 (393)
T ss_dssp CCCCEECSSSCCCCCHHHHHHTTCCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCTTCE
T ss_pred CccceeccCCCCCCCHHHHHHhcccccCcccHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCCCCCE
Confidence 34679999999999999999999866556666667888999999999999987666999999999999999999999999
Q ss_pred EEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhc
Q 015729 87 IISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEY 166 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~ 166 (401)
|+++.++|++..+...++..|++++.++.+.++.+|++++++++++ ++++++++++++||||.+.|+++|.++|++
T Consensus 101 vl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~---~~~~~v~~~~~~nptG~~~~l~~i~~l~~~- 176 (393)
T 3kgw_A 101 FLTGTNGIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQ---HKPVLLFLVHGESSTGVVQPLDGFGELCHR- 176 (393)
T ss_dssp EEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHH---HCCSEEEEESEETTTTEECCCTTHHHHHHH-
T ss_pred EEEEeCCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhh---CCCcEEEEeccCCcchhhccHHHHHHHHHH-
Confidence 9999998887666677888999999999988888999999999985 256999999999999999999999999999
Q ss_pred CCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCC--CccccchHHHHHHhh--
Q 015729 167 RHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKS--VRVFFDWKDYIKFYN-- 242 (401)
Q Consensus 167 ~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-- 242 (401)
+|+++|+|++|+.+..+++....++|++++|+||+++++.|+|++++++++.+.+..... ...+.++......+.
T Consensus 177 -~~~~li~De~~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (393)
T 3kgw_A 177 -YQCLLLVDSVASLGGVPIYMDQQGIDIMYSSSQKVLNAPPGISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCE 255 (393)
T ss_dssp -TTCEEEEECTTTTTTSCCCTTTTTCCEEEEESSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCS
T ss_pred -cCCEEEEECCccccCcccchhhcCCCEEEecCcccccCCCceeEEEECHHHHHHHhccCCCCCceeecHHHHHHhhhhc
Confidence 999999999999888888777788999999999999888999999999999888765432 233344333222221
Q ss_pred -cCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHH
Q 015729 243 -LGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSE 321 (401)
Q Consensus 243 -~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (401)
...++.++++...++++.++++.+.++++++..+++.++++++.+.|+++|+++..+......+.++++.+|++.+..+
T Consensus 256 ~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (393)
T 3kgw_A 256 GETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEMGLKFFVKDPEIRLPTITTVTVPAGYNWRD 335 (393)
T ss_dssp SSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCSSEEEEECCTTBCHHH
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcCCeEEEEeCCCCCCHHH
Confidence 1234456788888889999999888888899999999999999999999888876544344556677888877778889
Q ss_pred HHHHHHhhCCeEEccCCCCCCCcEEEEeecc-cCCHHHHHHHHHHHHHHHHhcC
Q 015729 322 IVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG-HLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 322 l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~-~~~~~di~~~~~~i~~~l~~~~ 374 (401)
+.+.|.+++||.+.+|..+..++++||++.+ ..+++|+++++++|+++++++.
T Consensus 336 ~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~ 389 (393)
T 3kgw_A 336 IVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQHCP 389 (393)
T ss_dssp HHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhh
Confidence 9999987779999998766567899999745 4599999999999999998764
No 6
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=4.6e-42 Score=325.89 Aligned_cols=363 Identities=28% Similarity=0.454 Sum_probs=300.8
Q ss_pred CCCCcccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCC
Q 015729 6 APGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGD 85 (401)
Q Consensus 6 ~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd 85 (401)
.....|++.++|.++++++++++.+....++++...+...++++.+++++|.+.++.+++++|+++|+..++.+++++||
T Consensus 17 ~~~~~~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~~gd 96 (386)
T 2dr1_A 17 VKPKYKLFTAGPVACFPEVLEIMKVQMFSHRSKEYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSKGG 96 (386)
T ss_dssp HSCCSEECCSSSCCCCHHHHHHTTSCCCCTTSHHHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSCTTC
T ss_pred cCccceeecCCCcCCcHHHHHHHhcccccccCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhcCCC
Confidence 44578999999999999999999997665555555778899999999999987345599999999999999998899999
Q ss_pred eEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhh
Q 015729 86 RIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDE 165 (401)
Q Consensus 86 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~ 165 (401)
+|+++.++|++..+...++..|++++.++.+.++.+|++++++++++. ++++++++++++||||.+.|+++|.++|++
T Consensus 97 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~--~~~~~v~~~~~~nptG~~~~l~~i~~l~~~ 174 (386)
T 2dr1_A 97 KVLVTIIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKN--PDVEAVTITYNETSTGVLNPLPELAKVAKE 174 (386)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHC--TTCCEEEEESEETTTTEECCHHHHHHHHHH
T ss_pred eEEEEcCCchhHHHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcC--CCCcEEEEEeecCCcchhCCHHHHHHHHHH
Confidence 999999998875455677889999999999888789999999999642 367999999999999999999999999999
Q ss_pred cCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhh-cC
Q 015729 166 YRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYN-LG 244 (401)
Q Consensus 166 ~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g 244 (401)
+|+++|+|++|+.+..+++....++|++++|.||+++++.|+|++++++++.+.+.......+++++......+. .+
T Consensus 175 --~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (386)
T 2dr1_A 175 --HDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKE 252 (386)
T ss_dssp --TTCEEEEECTTTBTTBCCCTTTTTCSEEEEETTSTTCCCSSCEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHS
T ss_pred --cCCeEEEEccccccCccccccccCCcEEEEeccccccCCCceEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCC
Confidence 999999999999887767777778999999999999877789999999998888765433444555544333332 11
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHH
Q 015729 245 TFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIV 323 (401)
Q Consensus 245 ~~~~~~~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 323 (401)
...++++...++++.++++.+.+. ++++.+++++++++++.+.|+++|+++..+.+ ...+.++++.+|.+.+..++.
T Consensus 253 -~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 330 (386)
T 2dr1_A 253 -STPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREIGLDILAEPG-HESPTITAVLTPPGIKGDEVY 330 (386)
T ss_dssp -SCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCTT-CBCSSEEEEECCTTCCHHHHH
T ss_pred -CCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeeCcCcc-ccCCceEEEEcCCCCCHHHHH
Confidence 224468888888888999988776 68899999999999999999998887765432 224567888887667888999
Q ss_pred HHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 324 RRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 324 ~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
+.|.++ ||.+.++..+..++++||++..+++++|+++++++|++++++++.
T Consensus 331 ~~l~~~-gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 381 (386)
T 2dr1_A 331 EAMRKR-GFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINELKK 381 (386)
T ss_dssp HHHHHT-TEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHC-CeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 999887 999998875445679999998888999999999999999987644
No 7
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=100.00 E-value=3.6e-42 Score=325.63 Aligned_cols=354 Identities=20% Similarity=0.315 Sum_probs=294.8
Q ss_pred CCcccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCC-ceEEecCChhHHHHHHHhccCCCCCe
Q 015729 8 GKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSG-TPFLIPTTGTGAWESALTNTLSPGDR 86 (401)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-~~i~~~~g~t~a~~~~~~~~~~~gd~ 86 (401)
+..++|+|||.++++++++++.+....++.+.+.+...++++.+++++|.+.+ +.+++++|+++|++.++.+++++||+
T Consensus 18 ~~~~~~~pgp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~ 97 (376)
T 3f0h_A 18 QGMLNFTVGPVMSSEEVRAIGAEQVPYFRTTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDK 97 (376)
T ss_dssp SSCEECSSSSCCCCHHHHHHHTSCCCCCSSHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTCC
T ss_pred cCceeecCCCCCCcHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccCCCCe
Confidence 47899999999999999999999776666666778889999999999999754 43455899999999999999999999
Q ss_pred EEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhc
Q 015729 87 IISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEY 166 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~ 166 (401)
|+++.+++++..+...+...|++++.++.+.++.+|+++++++++ ++++++++++++||||.+.|+++|.++|++
T Consensus 98 vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~----~~~~~v~~~~~~nptG~~~~l~~i~~l~~~- 172 (376)
T 3f0h_A 98 VLVIDGGSFGHRFVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDN----QNFTGLLVNVDETSTAVLYDTMMIGEFCKK- 172 (376)
T ss_dssp EEEEESSHHHHHHHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTT----SCCCEEEEESEETTTTEECCHHHHHHHHHH-
T ss_pred EEEEeCChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhc----cCceEEEEecccCCcceecCHHHHHHHHHH-
Confidence 999999888876656778889999999998888899999998765 467999999999999999999999999999
Q ss_pred CCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCC
Q 015729 167 RHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTF 246 (401)
Q Consensus 167 ~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 246 (401)
+|+++|+|++++.+..+++....++|++++|+||++++++|+|++++++++.+++........+.+..........+ .
T Consensus 173 -~~~~li~D~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 250 (376)
T 3f0h_A 173 -NNMFFVCDCVSAFLADPFNMNECGADVMITGSQKVLACPPGISVIVLAPRGVERVEKSKVRTMYFDLKDALKNQERG-Q 250 (376)
T ss_dssp -TTCEEEEECTTTTTTSCCCHHHHTCSEEEEETTTTTCCCSSCEEEEECHHHHHHHHTCCCCCSTTCHHHHHHHHTTT-C
T ss_pred -cCCEEEEEcCccccCccccccccCccEEEecCcccccCCCceEEEEECHHHHHHhhcCCCCceeecHHHHHhhcccC-C
Confidence 99999999999998887777777899999999999987899999999999988887654444455555444433322 2
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHH
Q 015729 247 WPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRR 325 (401)
Q Consensus 247 ~~~~~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 325 (401)
+.++++...++++.++++.+.+. ++++..++..++++++.+.|+++++++..+. ....++.+. +.+.+..++.+.
T Consensus 251 ~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~l~~~ 326 (376)
T 3f0h_A 251 TPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDLPFELVSES---PANGVTSVH-PTTANAYDIFLK 326 (376)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSSEEECCSS---BBTTEEEEE-ESSSCHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCccCccc---cCceEEEEe-CCCCCHHHHHHH
Confidence 35678887778899999988887 5889999999999999999988876665432 233344444 456788899999
Q ss_pred HHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 326 AWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 326 L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
|.+++||.+++|+....++++|+++...++++|+++++++|++++++
T Consensus 327 l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 327 LKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp HHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred HHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 98877999998865555778999998888999999999999999864
No 8
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=100.00 E-value=4.1e-41 Score=320.63 Aligned_cols=362 Identities=25% Similarity=0.399 Sum_probs=294.5
Q ss_pred CcccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEE
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRII 88 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl 88 (401)
+.+++.++|.++++++++++.+....++.+.+.....++++.+++++|.+++..+++++|+++|+..++.+++++||+|+
T Consensus 18 ~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl 97 (396)
T 2ch1_A 18 EKIMMGPGPSNCSKRVLTAMTNTVLSNFHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVL 97 (396)
T ss_dssp CCBCCSSSSCCCCHHHHHHTTSCCCCTTCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEE
T ss_pred cceeecCCCCCCCHHHHHHhccccccCCChhHHHHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhcCCCCeEE
Confidence 57899999999999999999987654444445567899999999999997653599999999999999999899999999
Q ss_pred EEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCC
Q 015729 89 SFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRH 168 (401)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~ 168 (401)
++.++|+++.+...++..|++++.++.+.++.+|++++++++++. ++++|++++++||||.+.|+++|.++|++ +
T Consensus 98 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~---~~~~v~~~~~~nptG~~~~~~~i~~l~~~--~ 172 (396)
T 2ch1_A 98 IAVNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELH---QPKCLFLTHGDSSSGLLQPLEGVGQICHQ--H 172 (396)
T ss_dssp EEESSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHH---CCSEEEEESEETTTTEECCCTTHHHHHHH--T
T ss_pred EEcCCcccHHHHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhC---CCCEEEEECCCCCCceecCHHHHHHHHHH--c
Confidence 999998887554577889999999999888789999999999751 46899999999999999999999999999 9
Q ss_pred CcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCC--CCccccchHHHHHHhhc---
Q 015729 169 PALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAK--SVRVFFDWKDYIKFYNL--- 243 (401)
Q Consensus 169 ~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--- 243 (401)
|+++|+|++|+++..+++....++|++++|.||+++++.|+|+++++++.++.+...+ ....+++.......+..
T Consensus 173 ~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (396)
T 2ch1_A 173 DCLLIVDAVASLCGVPFYMDKWEIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDE 252 (396)
T ss_dssp TCEEEEECTTTBTTBCCCTTTTTCCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSS
T ss_pred CCEEEEEccccccCCccchhhcCcCEEEEcCCccccCCCCeEEEEECHHHHHhhhhccCcccceEechHHHHHhhhhhcc
Confidence 9999999999988777777777889999999999988899999999999888775432 22223333222222211
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHH
Q 015729 244 GTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIV 323 (401)
Q Consensus 244 g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 323 (401)
..+..++++...++++.++++.+.+.++++..++++++++++.+.|+++|+++..+..+...+.++++.+|++.+..++.
T Consensus 253 ~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (396)
T 2ch1_A 253 PKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIMIPKGVDWWKVS 332 (396)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEECCTTCCHHHHH
T ss_pred cCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCCeeccCCccccCCceEEEEcCCCCCHHHHH
Confidence 12335568887888888899887667788999999999999999999888887665432344557888887677888999
Q ss_pred HHHHhhCCeEEccCCCCCCCcEEEEeecc-cCCHHHHHHHHHHHHHHHHhcCC
Q 015729 324 RRAWQRYNLSLGLGLNKVAGKVFRIGHLG-HLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 324 ~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~-~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
+.|.+++||.+.+|..+..++++||++.+ ..+++|+++++++|++++++++-
T Consensus 333 ~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~~ 385 (396)
T 2ch1_A 333 QYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATHP 385 (396)
T ss_dssp HHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhCc
Confidence 99987669999988655557889999844 56899999999999999987653
No 9
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=100.00 E-value=4.1e-41 Score=320.27 Aligned_cols=364 Identities=28% Similarity=0.405 Sum_probs=295.5
Q ss_pred CCCcccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCe
Q 015729 7 PGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDR 86 (401)
Q Consensus 7 ~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~ 86 (401)
.++.|++.+||.++++++++++.+....++.+...+...++++.+++++|.++.+.+++++|+|+|+..++.+++++||+
T Consensus 17 ~~~~~~~~~g~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~ 96 (393)
T 2huf_A 17 TPNKLLMGPGPSNAPQRVLDAMSRPILGHLHPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLLEDGDV 96 (393)
T ss_dssp CCCCEECSSSCCCCCHHHHHHTTSCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCCTTCE
T ss_pred CCCeEEecCCCCCCCHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHhCCCCE
Confidence 45789999999999999999999876655545566789999999999999876545999999999999999888999999
Q ss_pred EEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhc
Q 015729 87 IISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEY 166 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~ 166 (401)
|+++.++|++..+...++..|++++.++.+.++.+|++++++++++ .++++|++++++||||.+.|+++|.++|++
T Consensus 97 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~v~~~~~~nptG~~~~l~~i~~~~~~- 172 (393)
T 2huf_A 97 ILIGHTGHWGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLI---HKPSVLFLTQGDSSTGVLQGLEGVGALCHQ- 172 (393)
T ss_dssp EEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHH---HCCSEEEEESEETTTTEECCCTTHHHHHHH-
T ss_pred EEEECCCcchHHHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhc---cCCcEEEEEccCCCccccCCHHHHHHHHHH-
Confidence 9999999988655556677899999999988778999999999975 146999999999999999999999999999
Q ss_pred CCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCC--CCccccchHHHHHHhhc-
Q 015729 167 RHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAK--SVRVFFDWKDYIKFYNL- 243 (401)
Q Consensus 167 ~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~- 243 (401)
+|+++|+|++|+++..+.+....++|++++|+||++++++|+|++++++++.+.+.... ...++.+.......+..
T Consensus 173 -~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~sK~l~g~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (393)
T 2huf_A 173 -HNCLLIVDTVASLGGAPMFMDRWEIDAMYTGSQKVLGAPPGITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCF 251 (393)
T ss_dssp -TTCEEEEECTTTBTTBCCCTTTTTCSEEECCSSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCS
T ss_pred -cCCEEEEEcccccCCCCcchhhcCccEEEECCCcccccCCCeEEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhccc
Confidence 99999999999988777776667899999999999888899999999999988876542 11222222211121210
Q ss_pred --CCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHH
Q 015729 244 --GTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSE 321 (401)
Q Consensus 244 --g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (401)
..+..++++...++++.++++.+.+.++++..++..++++++.+.|+++|+++..+.. .+.+.++++.++.+.+..+
T Consensus 252 ~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 330 (393)
T 2huf_A 252 GRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDAGFELYADPK-DRLSTVTTIKVPQGVDWLK 330 (393)
T ss_dssp SSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGG-GBCTTEEEEECCTTCCHHH
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCcc-ccCCcEEEEEcCCCCCHHH
Confidence 1223456888888888889988877778889999999999999999988887765432 1344577788866678889
Q ss_pred HHHHHHhhCCeEEccCCCCCCCcEEEEeecc-cCCHHHHHHHHHHHHHHHHhcCCC
Q 015729 322 IVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG-HLNELQLLGCLAGVEMILKDVGYP 376 (401)
Q Consensus 322 l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~-~~~~~di~~~~~~i~~~l~~~~~~ 376 (401)
+.+.|.+++||.+.++..+..++++||++.+ ..+++|+++++++|++++++++..
T Consensus 331 ~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~~~ 386 (393)
T 2huf_A 331 AAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAAVKPD 386 (393)
T ss_dssp HHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHcCCC
Confidence 9999986669999988665456799999855 457999999999999999887553
No 10
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=8.9e-42 Score=319.88 Aligned_cols=344 Identities=25% Similarity=0.406 Sum_probs=285.5
Q ss_pred ccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEE
Q 015729 11 HLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (401)
Q Consensus 11 ~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 90 (401)
|||.|||.++++.+++++.+....+.++...+...++++.+++++|.++ +.+++++|+++|+..++.+++++||+|+++
T Consensus 3 ~l~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~-~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 81 (352)
T 1iug_A 3 WLLTPGPVRLHPKALEALARPQLHHRTEAAREVFLKARGLLREAFRTEG-EVLILTGSGTLAMEALVKNLFAPGERVLVP 81 (352)
T ss_dssp EECSSSSCCCCHHHHHHHHSCCCCTTSHHHHHHHHHHHHHHHHHHTCSS-EEEEEESCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred ccccCCCCCCCHHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHhCCCC-ceEEEcCchHHHHHHHHHhccCCCCeEEEE
Confidence 8999999999999999999977666556666778999999999999874 559999999999999999989999999999
Q ss_pred cCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCC--
Q 015729 91 LIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRH-- 168 (401)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~-- 168 (401)
.++|++..+...++..|++++.++.+.++.+|++++++ ++++++++++++||||.+.|+++|.++|++ +
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~-------~~~~~v~~~~~~nptG~~~~l~~i~~l~~~--~~~ 152 (352)
T 1iug_A 82 VYGKFSERFYEIALEAGLVVERLDYPYGDTPRPEDVAK-------EGYAGLLLVHSETSTGALADLPALARAFKE--KNP 152 (352)
T ss_dssp ECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCTTTSCC-------SSCSEEEEESEETTTTEECCHHHHHHHHHH--HCT
T ss_pred eCCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHhc-------cCCcEEEEEEecCCcceecCHHHHHHHHHh--hCC
Confidence 99999876445667789999999998877789888776 256899999999999999999999999999 7
Q ss_pred CcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCC
Q 015729 169 PALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWP 248 (401)
Q Consensus 169 ~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 248 (401)
|+++|+|++|+++..+++....++|++++|.||++.++.|+|+++++++.++++.. ..++.++.........+ .+.
T Consensus 153 ~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~ 228 (352)
T 1iug_A 153 EGLVGADMVTSLLVGEVALEAMGVDAAASGSQKGLMCPPGLGFVALSPRALERLKP---RGYYLDLARELKAQKEG-ESA 228 (352)
T ss_dssp TCEEEEECTTTBTTBCCCSGGGTCSEEEEESSSTTCCCSCEEEEEECHHHHHTCCC---CSSTTCHHHHHHHHTTT-CCS
T ss_pred CCEEEEECCccccCcceeccccCeeEEEecCcccccCCCceeEEEECHHHHHHhhC---CCceeeHHHHHhhcccC-CCC
Confidence 99999999999887777766667999999999988888899999999998776654 23344444333333222 335
Q ss_pred CCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHh
Q 015729 249 YTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQ 328 (401)
Q Consensus 249 ~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 328 (401)
++++...++++.++++.+.+. +++.+++++++++++.+.|+++|+++..+. ..+.++++.++++.+..++.+.|.+
T Consensus 229 ~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~ 304 (352)
T 1iug_A 229 WTPAINLVLAVAAVLEEVLPR-LEEHLALKAWQNALLYGVGEEGGLRPVPKR---FSPAVAAFYLPEGVPYARVKEAFAQ 304 (352)
T ss_dssp SCCCHHHHHHHHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHTTCEESCSS---BCTTCEEEECCTTCCHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCcccccc---cCCeEEEEEcCCCCCHHHHHHHHHH
Confidence 678888888888888876655 788999999999999999998887766532 2445788888766788899999987
Q ss_pred hCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 329 RYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 329 ~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+ ||.+.++..+..++++||++....+++|+++++++|+++++++
T Consensus 305 ~-gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 348 (352)
T 1iug_A 305 R-GAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEI 348 (352)
T ss_dssp T-TEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred C-CEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHHHh
Confidence 7 9999988754456789999988788999999999999998765
No 11
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=100.00 E-value=1e-40 Score=312.63 Aligned_cols=349 Identities=26% Similarity=0.382 Sum_probs=286.5
Q ss_pred ccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCC-CCceEEecCChhHHHHHHHhccCCCCCeEEE
Q 015729 11 HLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIIS 89 (401)
Q Consensus 11 ~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~ 89 (401)
++|.|||.++++.+++++.+....++++...+...++++.+++++|.+ +++.+++++|+++|+..++.++++ |+|++
T Consensus 2 ~~~~~gp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~ 79 (353)
T 2yrr_A 2 LLLTPGPTPIPERVQKALLRPMRGHLDPEVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLDR--GPVLV 79 (353)
T ss_dssp EECSSSSCCCCHHHHGGGGSCCCCTTCHHHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEE
T ss_pred ccCCCCCCCCCHHHHHHHhcccccccCHHHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEE
Confidence 689999999999999999997766655556677899999999999986 345699999999999999988776 89999
Q ss_pred EcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCC
Q 015729 90 FLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHP 169 (401)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~ 169 (401)
+.++|+++.+...++..|++++.++.+.++.+|++++++.+++ .+++++++++++||||.+.|+++|.++|++ +|
T Consensus 80 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~---~~~~~v~~~~~~nptG~~~~~~~i~~l~~~--~~ 154 (353)
T 2yrr_A 80 LVNGAFSQRVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKR---RRYRMVALVHGETSTGVLNPAEAIGALAKE--AG 154 (353)
T ss_dssp EECSHHHHHHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHH---SCCSEEEEESEETTTTEECCHHHHHHHHHH--HT
T ss_pred EcCCCchHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHh---CCCCEEEEEccCCCcceecCHHHHHHHHHH--cC
Confidence 9998888655566788899999999988888999999999985 156899999999999999999999999999 99
Q ss_pred cEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCC
Q 015729 170 ALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPY 249 (401)
Q Consensus 170 ~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 249 (401)
+++|+|++|+++..+.+....++|++++|+||++++++|+|+++++++..+.+.. ....+++........... .+.+
T Consensus 155 ~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~-~~~~ 231 (353)
T 2yrr_A 155 ALFFLDAVTTLGMLPFSMRAMGVDYAFTGSQKCLSAPPGLAPIAASLEARKAFTG--KRGWYLDLARVAEHWERG-GYHH 231 (353)
T ss_dssp CEEEEECTTTTTTSCCCHHHHTCSEEECCTTSTTCCCSSCEEEEECHHHHHHCCC--CSCSTTCHHHHHHHHTTC-CCSS
T ss_pred CeEEEEcCcccccccccccccCceEEEecCcccccCCCceEEEEECHHHHHHhcc--CCCccccHHHHhhhhhcC-CCCC
Confidence 9999999998877666655567899999999998888899999999999887753 122333333222221112 3345
Q ss_pred CCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhh
Q 015729 250 TPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQR 329 (401)
Q Consensus 250 ~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 329 (401)
+++...++++.++++.+.+.++++.+++++++++++.+.|+++|+++..+. ...+.++++.+|++.+..++.+.|.++
T Consensus 232 ~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~ 309 (353)
T 2yrr_A 232 TTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKARGFRPYPKA--SPLPTVLVVRPPEGVDADRLVRALYAE 309 (353)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEESCSS--SBCTTEEEEECCTTCCHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCCccccCc--cCCCeEEEEECCCCCCHHHHHHHHHHC
Confidence 788888888889999887778889999999999999999998887766532 124556778887677888999999877
Q ss_pred CCeEEccCCCCCCCcEEEEeecccCCHHHHH-HHHHHHHHHHHh
Q 015729 330 YNLSLGLGLNKVAGKVFRIGHLGHLNELQLL-GCLAGVEMILKD 372 (401)
Q Consensus 330 ~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~-~~~~~i~~~l~~ 372 (401)
||.+.+|..+..++++|+++....+++|++ +++++|++++++
T Consensus 310 -gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 310 -GVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp -TEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred -CEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 999998875555678999987778999999 999999998764
No 12
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=100.00 E-value=1.9e-39 Score=308.78 Aligned_cols=356 Identities=29% Similarity=0.459 Sum_probs=287.4
Q ss_pred CcccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEE
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRII 88 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl 88 (401)
+.|++.++|.++++++++++.+....++.....+...++++.+++++|.++..++++++|+++|+..++.+++++||+|+
T Consensus 34 ~~~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl 113 (393)
T 1vjo_A 34 SRLLLGPGPSNAHPSVLQAMNVSPVGHLDPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVL 113 (393)
T ss_dssp CCEECSSSCCCCCHHHHHHHSSCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEE
T ss_pred cceeccCCCCCCCHHHHHHHhcccccccCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhccCCCCEEE
Confidence 57999999999999999999997755544445678889999999999996542599999999999999999899999999
Q ss_pred EEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCC
Q 015729 89 SFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRH 168 (401)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~ 168 (401)
++.++|++..+...++..|++++.++.+.++.+|++++++++++. +++++++++++||||.+.|+++|.++|++ +
T Consensus 114 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~---~~~~v~~~~~~nptG~~~~l~~i~~l~~~--~ 188 (393)
T 1vjo_A 114 IGVAGYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETH---RPAILALVHAETSTGARQPLEGVGELCRE--F 188 (393)
T ss_dssp EEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHH---CCSEEEEESEETTTTEECCCTTHHHHHHH--H
T ss_pred EEcCChhHHHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhhC---CceEEEEeccCCCcceeccHHHHHHHHHH--c
Confidence 999998874455677888999999999888789999999999751 45899999999999999999999999999 9
Q ss_pred CcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCC--CCccccchHHHHHHhhcCCC
Q 015729 169 PALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAK--SVRVFFDWKDYIKFYNLGTF 246 (401)
Q Consensus 169 ~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~ 246 (401)
|+++|+|++|+++..+++....++|++++|.||+++++.|+|++++++++.+.+.... ...++++..........+..
T Consensus 189 ~~~li~Dea~~~g~~~~~~~~~~~di~~~s~sK~l~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (393)
T 1vjo_A 189 GTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERV 268 (393)
T ss_dssp TCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCSCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCC
T ss_pred CCEEEEECCccccCcCCcccccCccEEEEcCcccccCCCceEEEEECHHHHHHHhccCCCCCceecCcHhhhhhhccCCC
Confidence 9999999999988777777777899999999999988888999999999888774321 11222222211111111222
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHH
Q 015729 247 WPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRA 326 (401)
Q Consensus 247 ~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 326 (401)
..++++...++++.++++.+.+.++++.++++.++++++.+.|+++|+++..+.. ...+.++++.+|.+.+..++.+.|
T Consensus 269 ~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l 347 (393)
T 1vjo_A 269 YHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIGLSLHVEKE-YRLPTLTTVCIPDGVDGKAVARRL 347 (393)
T ss_dssp CCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGG-GBCSSEEEEECCTTCCHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcCCcccCCcc-ccCCcEEEEEcCCCCCHHHHHHHH
Confidence 2226888888889999998777678899999999999999999988887765432 223457788887677888999999
Q ss_pred HhhCCeEEccCCCCCCCcEEEEeecc-cCCHHHHHHHHHHHHHHH
Q 015729 327 WQRYNLSLGLGLNKVAGKVFRIGHLG-HLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 327 ~~~~~i~v~~g~~~~~~~~~Ri~~~~-~~~~~di~~~~~~i~~~l 370 (401)
.+++||.+.+|..+..++++||++.+ ..+++++++++++|++++
T Consensus 348 ~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 348 LNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp HHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred HhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 87679999998765557899999644 456778999999999876
No 13
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=1.7e-40 Score=312.26 Aligned_cols=346 Identities=19% Similarity=0.263 Sum_probs=284.7
Q ss_pred CcccccCCCcCChHHHHHHHcc----Cc--CCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCC
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNR----NN--EDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLS 82 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~----~~--~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~ 82 (401)
+.++|.|||..+++++++++.+ .. ..++.+.+.+...++++.+++++|.+.++++++++|+|+|+..++.++.+
T Consensus 4 ~~~~~~p~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~~ 83 (362)
T 3ffr_A 4 NKIYFTPGPSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCVE 83 (362)
T ss_dssp CCEEECSSSCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHCS
T ss_pred cceeccCCCcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhccC
Confidence 4689999999999999955444 33 23445566688999999999999987656799999999999999999887
Q ss_pred CCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHH
Q 015729 83 PGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKL 162 (401)
Q Consensus 83 ~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l 162 (401)
+ +++++.+++++..+...++..|++++.++.+.++.+|+++++ ++ ++++++++++++||||.+.|+++|.++
T Consensus 84 ~--~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~--~~----~~~~~v~~~~~~nptG~~~~l~~i~~l 155 (362)
T 3ffr_A 84 K--KSFHCVNGSFSKRFYEFAGELGREAYKEEAAFGKGFYPADIT--VP----ADAEIICLTHNETSSGVSMPVEDINTF 155 (362)
T ss_dssp S--EEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCGGGCC--CC----TTCCEEEEESEETTTTEECCHHHHTTS
T ss_pred C--cEEEEcCcHHHHHHHHHHHHhCCCeEEEecCCCCCCCHHHHh--cc----CCccEEEEEcCCCCcceeCCHHHHHHH
Confidence 7 677777778876666677888999999999888889999998 33 578999999999999999999999999
Q ss_pred hhhcCC-CcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCC----CccccchHHH
Q 015729 163 LDEYRH-PALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKS----VRVFFDWKDY 237 (401)
Q Consensus 163 ~~~~~~-~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~----~~~~~~~~~~ 237 (401)
|++ + |+++|+|++|+.+..+.+... +|++++|+||++++++|+|+++++++..+++..... ...++++..+
T Consensus 156 a~~--~p~~~li~D~a~~~~~~~~~~~~--~d~~~~s~~K~~~~~~G~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~ 231 (362)
T 3ffr_A 156 RDK--NKDALIFVDAVSSLPYPKFDWTK--IDSVFFSVQKCFGLPAGLGVWILNDRVIEKSKALLAKRKSIGTYHTIPSM 231 (362)
T ss_dssp GGG--STTSEEEEECTTTTTSSCCCTTS--CSEEEEETTSTTCCCSCCEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHHH
T ss_pred HHh--CCCCEEEEecccccCCcccChhH--CcEEEEecccccCCCCceEEEEECHHHHHHhhhccccCCCCcccccHHHH
Confidence 999 8 999999999998887766654 899999999999878999999999998776654321 2334455554
Q ss_pred HHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCC
Q 015729 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSH 316 (401)
Q Consensus 238 ~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~ 316 (401)
......+ .+.++++...++++.++++.+...++++..++..++++++.+.|+++ |+++..+.+...++.++++.+++
T Consensus 232 ~~~~~~~-~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~- 309 (362)
T 3ffr_A 232 LEKARVN-QTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTTM- 309 (362)
T ss_dssp HHHHTTT-CCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEESS-
T ss_pred HHHhhcC-CCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecCC-
Confidence 4444433 34667888888899999998887788999999999999999999998 88877644333556788888865
Q ss_pred CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 317 INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 317 ~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
+..++.+.|.++ ||.+.+|+.+..++++||++...++++|+++++++|++++
T Consensus 310 -~~~~~~~~l~~~-gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 310 -LPGEINKILEPF-DMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp -CHHHHHHHHGGG-TEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred -CHHHHHHHHHHC-CeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 788999999887 9999998766667899999988889999999999998764
No 14
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=100.00 E-value=1.7e-39 Score=308.16 Aligned_cols=361 Identities=25% Similarity=0.448 Sum_probs=281.7
Q ss_pred CCCCCcccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCC---CCceEEecCChhHHHHHHHhccC
Q 015729 5 YAPGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTT---SGTPFLIPTTGTGAWESALTNTL 81 (401)
Q Consensus 5 ~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~---~~~~i~~~~g~t~a~~~~~~~~~ 81 (401)
|++.+.++|+|||..+++++++++.+....++.+.......++++.++++++.. +++.+++++|+|+|+..++.++.
T Consensus 1 ~~~~~~~~~~p~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~ 80 (385)
T 2bkw_A 1 MTKSVDTLLIPGPIILSGAVQKALDVPSLGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFI 80 (385)
T ss_dssp --CCCCEECSSSSCCCCHHHHHTTSCCCCCTTSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHS
T ss_pred CCCccceeecCCCcCchHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHh
Confidence 456788999999999999999999997765555555556788999999999875 23569999999999999998877
Q ss_pred ---CCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeC-CCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchH
Q 015729 82 ---SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVES-DWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLS 157 (401)
Q Consensus 82 ---~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~ 157 (401)
++||+|+++.+++++..+...++..|++++.++. +.++.+|++++++++++ .++++|++++++||||.+.|++
T Consensus 81 ~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~---~~~~~v~~~~~~nptG~~~~l~ 157 (385)
T 2bkw_A 81 LSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQ---NSYGAVTVTHVDTSTAVLSDLK 157 (385)
T ss_dssp CTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHH---SCCSEEEEESEETTTTEECCHH
T ss_pred ccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhc---CCCCEEEEEccCCCcCeEcCHH
Confidence 8999999987766665544567788999999998 77778999999999975 2569999999999999999999
Q ss_pred HHHHHhhhcCC--CcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHH-Hhcc---CCCCccc
Q 015729 158 KVRKLLDEYRH--PALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALE-ASKT---AKSVRVF 231 (401)
Q Consensus 158 ~i~~l~~~~~~--~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~-~~~~---~~~~~~~ 231 (401)
+|.++|++ + |+++|+|++|+.+..+++....++|++++|+||++++++|+|+++++++.++ ++.. .....++
T Consensus 158 ~i~~~~~~--~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~G~G~~~~~~~~~~~~l~~~~~~~~~~~~ 235 (385)
T 2bkw_A 158 AISQAIKQ--TSPETFFVVDAVCSIGCEEFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGHVHGYF 235 (385)
T ss_dssp HHHHHHHH--HCTTSEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSCEEEEEECHHHHHHHTCHHHHCCCSCST
T ss_pred HHHHHHHh--hCCCCEEEEECccccCCccccccccCceEEEecCccccccCCcceEEEEcHHHHHHHHhhccCCCCCcee
Confidence 99999999 7 9999999999988777777777899999999999988899999999998877 6532 1111222
Q ss_pred cchH---HHHHHhhcCC-CCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHH-HHcCCccccCCCcc-CC
Q 015729 232 FDWK---DYIKFYNLGT-FWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAV-EAWGLKNCTQKEEW-FS 305 (401)
Q Consensus 232 ~~~~---~~~~~~~~g~-~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L-~~~g~~~~~~~~~~-~~ 305 (401)
.+.. .....+..+. .+.++++...++++.++++.+.+.++++..++++++++++.+.| +++|+++..+.+.. ..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~ 315 (385)
T 2bkw_A 236 SSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSA 315 (385)
T ss_dssp TCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTBC
T ss_pred ecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhcCceecccCcccccC
Confidence 2221 1222333332 22356888888888899998877778889999999999999999 77787766432221 24
Q ss_pred ceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC-CCCcEEEEe-ecc---cCCHHHHHHHHHHHHHHHHhcC
Q 015729 306 DTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK-VAGKVFRIG-HLG---HLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 306 ~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~-~~~~~~Ri~-~~~---~~~~~di~~~~~~i~~~l~~~~ 374 (401)
+.++++.+++ ..++.+.|.++ ||.+.++... ...+++||+ +.. .++++|+++++++|+++++++|
T Consensus 316 ~~~~~~~~~~---~~~~~~~l~~~-gi~v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~~~ 385 (385)
T 2bkw_A 316 HGLTAVYVAD---PPDVIAFLKSH-GVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQRKK 385 (385)
T ss_dssp SSCEEEECSC---HHHHHHHHHHT-TEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC--
T ss_pred CceEEEecCC---HHHHHHHHHHC-CeEEeCCCCcccCCCEEEEEccccccccCCHHHHHHHHHHHHHHHHhcC
Confidence 5678888853 67899999765 9999988642 235689998 432 4699999999999999886543
No 15
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=100.00 E-value=3.4e-39 Score=303.74 Aligned_cols=356 Identities=20% Similarity=0.295 Sum_probs=283.7
Q ss_pred CcccccCCCcCChHHHHHHHccCcCCCCCccHH-HHHHHHHHHHHHHhcCCC-CceEEecCChhHHHHHHHhccCCCCCe
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVP-ALTKTLLEDIKKIFKTTS-GTPFLIPTTGTGAWESALTNTLSPGDR 86 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~l~~~la~~~g~~~-~~~i~~~~g~t~a~~~~~~~~~~~gd~ 86 (401)
+.++|++||...++++++++.+... ++.+.+. +...++++.+++++|.+. .+.+++++|+++|+..++.+++++||+
T Consensus 4 ~~~~~~~gp~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~ 82 (366)
T 1m32_A 4 NYLLLTPGPLTTSRTVKEAMLFDSC-TWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDK 82 (366)
T ss_dssp -CEECSSSSCCCCHHHHHTTCCCCC-TTSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTCC
T ss_pred ccccccCCCcCCCHHHHHHHhhhhc-CCCHHHHHHHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhcCCCCe
Confidence 4689999999999999999998643 3333334 678899999999999432 246999999999999999998999999
Q ss_pred EEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhc
Q 015729 87 IISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEY 166 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~ 166 (401)
|+++.+.+|+..+...++..|++++.++.+.++.+|++++++++++++ +++++++++++||||.+.|+++|.++|++
T Consensus 83 vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~--~~~~v~~~~~~nptG~~~~l~~i~~l~~~- 159 (366)
T 1m32_A 83 VLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADP--TISHIAMVHSETTTGMLNPIDEVGALAHR- 159 (366)
T ss_dssp EEEEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCT--TCCEEEEESEETTTTEECCHHHHHHHHHH-
T ss_pred EEEEeCCCccHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCC--CeEEEEEecccCCcceecCHHHHHHHHHH-
Confidence 988876566544456677789999999998887899999999998632 57899999999999999999999999999
Q ss_pred CCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcC-C
Q 015729 167 RHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLG-T 245 (401)
Q Consensus 167 ~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~ 245 (401)
+|+++|+|++|+.+..+++....++|++++|.||+++++.|+|++++++++.+.+.... ...++++......+... .
T Consensus 160 -~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 237 (366)
T 1m32_A 160 -YGKTYIVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHS-RSLSLDLYAQWRCMEDNHG 237 (366)
T ss_dssp -HTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSSEEEEEEEHHHHTTCTTCC-SCSTTCHHHHHHHHHHTTT
T ss_pred -cCCEEEEECCccccCcCccccccCccEEEecCcccccCCCceEEEEECHHHHHhhcCCC-CCccccHHHHHhhhcccCC
Confidence 99999999999988777776667799999999999978889999999999887765421 12223322222211110 1
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCC--CCCHHHH
Q 015729 246 FWPYTPSIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS--HINSSEI 322 (401)
Q Consensus 246 ~~~~~~~~~~~~a~~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l 322 (401)
...++++...++++.++++.+.+.| +++..++++++++++.+.|+++|+++..+.. ...+.++++.+++ +.+..++
T Consensus 238 ~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 316 (366)
T 1m32_A 238 KWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDE-LHSPIITAFYSPEDPQYRFSEF 316 (366)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGG-GBCSSEEEEECCCCTTCCHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHCCCeeccCch-hcCceEEEEEcCccCCCCHHHH
Confidence 1234688888888999999887777 8889999999999999999988877654321 1355688888875 6678899
Q ss_pred HHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 323 VRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 323 ~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.+.|.++ ||.+.++..+ .++++|+++...++++|+++++++|+++++++
T Consensus 317 ~~~l~~~-gi~v~~~~~~-~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 365 (366)
T 1m32_A 317 YRRLKEQ-GFVIYPGKVS-QSDCFRIGNIGEVYAADITALLTAIRTAMYWT 365 (366)
T ss_dssp HHHHHHT-TEECEECCCS-SSCEEEEECCSSCCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHC-CEEEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Confidence 9999877 9999888654 46789999888889999999999999987654
No 16
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=100.00 E-value=3e-41 Score=317.33 Aligned_cols=340 Identities=13% Similarity=0.140 Sum_probs=265.2
Q ss_pred CcccccCCCcCChHHHHHHHccCc------------CCCCCccHHHHHHHHHHHHHHHhcCCCCceEEe-cCChhHHHHH
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNN------------EDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLI-PTTGTGAWES 75 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~-~~g~t~a~~~ 75 (401)
+.|||.|||++++++|++++..+. ..|++..+.+.++++|+.+++++|.++++.++| ++|+|++++.
T Consensus 27 ~~yl~~agpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ 106 (386)
T 3qm2_A 27 QVFNFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAG 106 (386)
T ss_dssp CCEECCSSSCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHH
T ss_pred cCccccCCCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHH
Confidence 689999999999999999998865 234455667788999999999999976556888 6999999999
Q ss_pred HHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCC--CCCC-CChHHHHHHHhccCCCCceEEEEEecCCCccc
Q 015729 76 ALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESD--WGEG-AKLDVLASKLAADTAHTIKAICIVHNETATGV 152 (401)
Q Consensus 76 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~-~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~ 152 (401)
++.+++++||+++++..+++++.|...++..| +++.++.+ ..+. +++++++.+++ +++++|++++.+|.+|.
T Consensus 107 ai~~l~~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~----~~t~lV~~~h~et~tG~ 181 (386)
T 3qm2_A 107 VPLNLLGDKTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLS----DNAAYLHYCPNETIDGI 181 (386)
T ss_dssp HHHHHCTTCCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCC----TTCSCEEECSEETTTTE
T ss_pred HHHhccCCCCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcC----CCCcEEEEECCcCCcCE
Confidence 99999999999998888899988888888889 89999988 4443 67888877666 46789999999999999
Q ss_pred c-cchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccc
Q 015729 153 T-NNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVF 231 (401)
Q Consensus 153 ~-~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~ 231 (401)
+ .|+++|. +|+++++|+++++|..++|+++++ ++++|+||++ ||+|+|++++++++++++.+... .+
T Consensus 182 ~i~pi~~i~-------~g~~~~vDa~qs~g~~pidv~~~~--~~~~s~hK~l-GP~G~g~l~v~~~~~~~~~~~~p--~~ 249 (386)
T 3qm2_A 182 AIDETPDFG-------PEVVVTADFSSTILSAPLDVSRYG--VIYAGAQKNI-GPAGLTLVIVREDLLGKAHESCP--SI 249 (386)
T ss_dssp ECCCCCCCC-------TTCCEEEECTTTTTSSCCCGGGCS--EEEEETTTTT-CCTTEEEEEEEGGGCSCCCTTSC--GG
T ss_pred ecCchhhhc-------CCCEEEEEcccccCCCCCCccccC--EEEEeccccc-CCCccEEEEECHHHHhhhcccCC--cH
Confidence 6 8888874 689999999999999999999876 5779999999 69999999999998776654322 12
Q ss_pred cchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEE
Q 015729 232 FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTA 310 (401)
Q Consensus 232 ~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~ 310 (401)
.++.... +.+ ..++|+++..++++.+|++++.+. |++++.++.+++++++++.|+++|+.....++..+++.++.
T Consensus 250 ~~~~~~~---~~~-~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~ 325 (386)
T 3qm2_A 250 LDYTVLN---DND-SMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVP 325 (386)
T ss_dssp GCHHHHH---HC--------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEE
T ss_pred HHHHHHh---hcC-CCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEE
Confidence 3333222 222 224578999999999999999998 79999999999999999999988652221123345667888
Q ss_pred EEcCC-CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 311 VIVPS-HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 311 ~~~~~-~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
|.+|+ +.+ .++...|.++ ||.++.|..+. +.+|+|++.++|++|||+++++|+++.++.
T Consensus 326 f~~~~~~~~-~~~~~~L~~~-gI~~~~g~~~~--~~iRiS~~~~~t~edId~l~~~l~~~~~~~ 385 (386)
T 3qm2_A 326 FQLADNTLD-KVFLEESFAA-GLHALKGHRVV--GGMRASIYNAMPIEGVKALTDFMIDFERRH 385 (386)
T ss_dssp EEESSGGGH-HHHHHHHHHT-TEECCBCCTTT--CSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred EECCCcccc-HHHHHHHHHC-CCEEeCCCCCc--CeEEEEcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 99874 344 5676777655 99988876543 349999999999999999999999998763
No 17
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=100.00 E-value=3.8e-39 Score=300.34 Aligned_cols=337 Identities=15% Similarity=0.128 Sum_probs=274.1
Q ss_pred CCCcccccCCCcCChHHHHHHHccCcC------------CCCCccHHHHHHHHHHHHHHHhcCCCCceEEe-cCChhHHH
Q 015729 7 PGKNHLFVPGPVHIPDQVIRAMNRNNE------------DYRSPAVPALTKTLLEDIKKIFKTTSGTPFLI-PTTGTGAW 73 (401)
Q Consensus 7 ~~~~~~~~~~p~~~~~~v~~a~~~~~~------------~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~-~~g~t~a~ 73 (401)
+.+.|||.|||++++++|++++.+... .|++..+.+.+.++|+.+++++|.+++++++| |+|+|+++
T Consensus 3 ~~~~~~f~pgpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~ 82 (361)
T 3m5u_A 3 AMRKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQF 82 (361)
T ss_dssp -CCCEECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred ccceEeecCCCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHH
Confidence 468899999999999999999998654 45566778899999999999999976656888 99999999
Q ss_pred HHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCC--CChHHHHHHHhccCCCCceEEEEEecCCCcc
Q 015729 74 ESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEG--AKLDVLASKLAADTAHTIKAICIVHNETATG 151 (401)
Q Consensus 74 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~--~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG 151 (401)
+.++.+++ +||+++++..+++++.|...++..|++++.++.+.++. .++++ + ++ ++++++.++|.+|.+|
T Consensus 83 n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~-~--l~----~~t~lv~~~~~e~~tG 154 (361)
T 3m5u_A 83 AMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV-E--FS----DNADYAYICSNNTIYG 154 (361)
T ss_dssp HHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC-C--CC----TTSSEEEEESEETTTT
T ss_pred HHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh-h--cC----CCCCEEEEeCCCCCcc
Confidence 99999888 88988777777888888788888999999999988764 56766 4 65 3569999999999999
Q ss_pred cccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccc
Q 015729 152 VTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVF 231 (401)
Q Consensus 152 ~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~ 231 (401)
.+.|. ++ + +|+++++|+++++|..++|+++ +|++++|+||++ ||+|+|++++++++++++.+...+ .+
T Consensus 155 ~~~~~-----i~-~--~~~~~~vD~~q~~g~~~id~~~--~d~~~~s~~K~~-gp~G~g~l~~~~~~~~~~~~~~~p-~~ 222 (361)
T 3m5u_A 155 TQYQN-----YP-K--TKTPLIVDASSDFFSRKVDFSN--IALFYGGVQKNA-GISGLSCIFIRKDMLERSKNKQIP-SM 222 (361)
T ss_dssp EECSS-----CC-C--CSSCEEEECGGGTTSSCCCCTT--EEEEEEETTTTS-SCTTCEEEEEEHHHHHHHHTCCCC-GG
T ss_pred eeCCc-----cc-c--cCCEEEEEcccccCCCCCCccc--CCEEEEechhcc-CCCccEEEEEcHHHHhhhcCCCCC-ce
Confidence 99762 34 3 5999999999999999999884 799999999999 699999999999998887652222 23
Q ss_pred cchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHcC-C-ccccCCCccCCcee
Q 015729 232 FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAWG-L-KNCTQKEEWFSDTV 308 (401)
Q Consensus 232 ~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~g-~-~~~~~~~~~~~~~~ 308 (401)
.++.... +.+ ..++|+++..++++.+|++++.+. |++++.++.+++++++++.|++++ + ..... +..+++.+
T Consensus 223 ~~~~~~~---~~~-~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~-~~~rs~~i 297 (361)
T 3m5u_A 223 LNYLTHA---ENQ-SLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHAD-KKDRSLMN 297 (361)
T ss_dssp GCHHHHH---HTT-TCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSC-GGGBCSSE
T ss_pred eehHHHh---hcC-CCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCC-HHHcCCeE
Confidence 4433322 222 235789999999999999999998 899999999999999999999985 5 44332 23356678
Q ss_pred EEEEcCC--CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 309 TAVIVPS--HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 309 ~~~~~~~--~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
+.|.+|+ +++ .++...|.++ ||.+..|.... +.+|+|++.++|++|+|+++++|+++.++
T Consensus 298 vsf~~~~~~~~~-~~~~~~L~~~-gI~~~~g~~~~--g~iRiS~~~~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 298 VSFNIAKNKDLE-PLFVKEAEEA-GMIGLKGHRIL--GGIRASIYNALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp EEEEESSCTTHH-HHHHHHHHHT-TEECCBCCTTT--CSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCchhhh-HHHHHHHHHC-CCEEecCCCcc--CeEEEEccCCCCHHHHHHHHHHHHHHHHh
Confidence 8899875 233 4677777655 99988775543 35999999999999999999999998865
No 18
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=100.00 E-value=3.3e-39 Score=301.65 Aligned_cols=339 Identities=14% Similarity=0.110 Sum_probs=274.5
Q ss_pred cccCCCcCChHHHHHHHccCcC------------CCCCccHHHHHHHHHHHHHHHhcCCCCceEEe-cCChhHHHHHHHh
Q 015729 12 LFVPGPVHIPDQVIRAMNRNNE------------DYRSPAVPALTKTLLEDIKKIFKTTSGTPFLI-PTTGTGAWESALT 78 (401)
Q Consensus 12 ~~~~~p~~~~~~v~~a~~~~~~------------~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~-~~g~t~a~~~~~~ 78 (401)
+..+.+.++|++|++++.+... .|++..+.+.++++|+.+++++|.++++.++| ++|+|++++.++.
T Consensus 16 ~n~at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~ 95 (377)
T 3e77_A 16 ENLYFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPL 95 (377)
T ss_dssp CCEECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHH
T ss_pred ccccccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHH
Confidence 4567889999999999998553 45566788899999999999999976666888 6899999999999
Q ss_pred ccCCC--CCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccch
Q 015729 79 NTLSP--GDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL 156 (401)
Q Consensus 79 ~~~~~--gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l 156 (401)
+++.+ ||+++++..++++..|...++..|.+++.++.+.++..++++++..++ +++++|.+++.+|.+|.+.|+
T Consensus 96 ~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i~----~~t~lV~~~h~et~tG~~~pi 171 (377)
T 3e77_A 96 NLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLN----PDASYVYYCANETVHGVEFDF 171 (377)
T ss_dssp HHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCCC----TTCSCEEEESEETTTTEECSS
T ss_pred hccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccCCCcCCCCChHHhccC----CCccEEEEeCccCchheEchh
Confidence 88765 899999999999988888888889887777777666677877765554 467999999999999999998
Q ss_pred HHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHH
Q 015729 157 SKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKD 236 (401)
Q Consensus 157 ~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 236 (401)
+|++ +|+++++|+++++|..++|+++++ ++++|+||++ ||+|+|++++++++++++.+... .++++..
T Consensus 172 -----i~~~--~~~~~~vD~~q~~g~~~id~~~~~--~~~~s~~K~~-gp~G~g~l~~~~~~l~~~~~~~p--~~~~~~~ 239 (377)
T 3e77_A 172 -----IPDV--KGAVLVCDMSSNFLSKPVDVSKFG--VIFAGAQKNV-GSAGVTVVIVRDDLLGFALRECP--SVLEYKV 239 (377)
T ss_dssp -----CCCC--TTCCEEEECTTTTTSSCCCGGGCS--EEEEEGGGTT-SCTTCEEEEEETTSCSCCCTTSC--GGGCHHH
T ss_pred -----hhcc--CCCEEEEEcccccCCCCCchhhcC--EEEEeccccc-CCCccEEEEEcHHHHhhccCCCC--chhhHHH
Confidence 4777 999999999999999999999876 5889999999 79999999999998766654322 2344333
Q ss_pred HHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcC
Q 015729 237 YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVP 314 (401)
Q Consensus 237 ~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~ 314 (401)
.. +.+ ...+||++..++++.+|++++.+. |++++.++.+++++++++.|+++ |+.+...++..+++.++.|.+|
T Consensus 240 ~~---~~~-~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~ 315 (377)
T 3e77_A 240 QA---GNS-SLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIG 315 (377)
T ss_dssp HH---TTT-TCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEES
T ss_pred Hh---hcC-CCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcC
Confidence 22 222 236789999999999999999998 79999999999999999999998 8775443344467777889985
Q ss_pred CCCCH-----HHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 315 SHINS-----SEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 315 ~~~~~-----~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
+ ++. ..+...|.++ ||.+++|... .+.+|+|++.++|++|+|+++++|++++++.+
T Consensus 316 ~-~~~~~~~~~~~l~~l~~~-Gi~~~~g~~~--~g~iRiS~~~~~t~edId~l~~al~~~~~~~~ 376 (377)
T 3e77_A 316 N-AKGDDALEKRFLDKALEL-NMLSLKGHRS--VGGIRASLYNAVTIEDVQKLAAFMKKFLEMHQ 376 (377)
T ss_dssp S-TTCCHHHHHHHHHHHHHT-TEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred C-CCCchhHHHHHHHHHHHC-CcEEeCCCCc--CCEEEEECCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 4 322 2455666554 9998887543 34599999999999999999999999988654
No 19
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=6e-37 Score=292.55 Aligned_cols=348 Identities=17% Similarity=0.175 Sum_probs=275.1
Q ss_pred CcccccCCCcCChHHHHHHHccCcCC-----CCC-----ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHh
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNED-----YRS-----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT 78 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~-----~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~ 78 (401)
..|+..+.+.+.++.+++++.+.... +.+ +.......++++.+++++|.++++.+++++|+|+|+..++.
T Consensus 24 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~ 103 (406)
T 1kmj_A 24 LAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVAN 103 (406)
T ss_dssp CEECCTTTCCCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHH
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHHHHH
Confidence 57888888888899999988874421 111 12456788999999999998433459999999999999999
Q ss_pred cc----CCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccc
Q 015729 79 NT----LSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGV 152 (401)
Q Consensus 79 ~~----~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~ 152 (401)
++ +++||+|+++.++|++.. +...++..|++++.++.+.++.+|++++++++++ ++++|++++++||||.
T Consensus 104 ~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~v~~~~~~nptG~ 179 (406)
T 1kmj_A 104 SWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDE----KTRLLAITHVSNVLGT 179 (406)
T ss_dssp HTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCT----TEEEEEEESBCTTTCC
T ss_pred HhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhcc----CCeEEEEeCCCccccC
Confidence 88 899999999999998864 5566778899999999988788999999999873 6799999999999999
Q ss_pred ccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCcccc
Q 015729 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFF 232 (401)
Q Consensus 153 ~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~ 232 (401)
+.|+++|.++|++ +|+++|+|++|+.|..+++....++|++++|.||++ |++|+|++++++++.+.+........+.
T Consensus 180 ~~~l~~i~~l~~~--~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~~-g~~G~G~~~~~~~~~~~~~~~~~~~~~~ 256 (406)
T 1kmj_A 180 ENPLAEMITLAHQ--HGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLY-GPTGIGILYVKEALLQEMPPWEGGGSMI 256 (406)
T ss_dssp BCCHHHHHHHHHH--TTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTT-SCTTCEEEEECHHHHHHCCCSSCSTTSE
T ss_pred cCCHHHHHHHHHH--cCCEEEEEchhhcCCCCCcccccCCCEEEEEchhcc-CCCCcEEEEEeHHHHhhcCCcccCCCce
Confidence 9999999999999 999999999999887666655567999999999988 6888999999999988876543221110
Q ss_pred c---------hHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCc
Q 015729 233 D---------WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEE 302 (401)
Q Consensus 233 ~---------~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 302 (401)
+ +......+. .++++...++++.++++.+.+.++++..++..++++++.+.|+++ |+++..+.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-- 329 (406)
T 1kmj_A 257 ATVSLSEGTTWTKAPWRFE-----AGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQ-- 329 (406)
T ss_dssp EEEETTTEEEECCTTGGGC-----CSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCT--
T ss_pred eecccccccccCCCchhcc-----CCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--
Confidence 0 000001111 335777777788788888877788889999999999999999987 77766532
Q ss_pred cCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC--------CCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 303 WFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK--------VAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~--------~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
. .+.++.+.++ +.+..++.+.|.++ ||.+.+|..+ ...+++||++...++++|+++++++|+++++.+
T Consensus 330 ~-~~~~~~~~~~-~~~~~~~~~~l~~~-gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 330 N-RLGVIAFNLG-KHHAYDVGSFLDNY-GIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp T-CCSEEEEEET-TCCHHHHHHHHHHT-TEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred C-cCCEEEEEEC-CCCHHHHHHHHhhC-CcEEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence 1 2345666774 45778898888766 9999887532 124789999988889999999999999998754
No 20
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=100.00 E-value=4.2e-37 Score=292.13 Aligned_cols=348 Identities=16% Similarity=0.129 Sum_probs=274.1
Q ss_pred CCCCCCCcccccCCCcCChHHHHHHHccCcCCC-----C---Cc-cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHH
Q 015729 3 YMYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDY-----R---SP-AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAW 73 (401)
Q Consensus 3 ~~~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~-----~---~~-~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~ 73 (401)
|+..++..|+..+++.+.++.+++++.+..... . .+ .......++++.+++++|.++. ++++++|+++|+
T Consensus 11 f~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g~~~~-~v~~~~g~t~a~ 89 (390)
T 1elu_A 11 FPGLANKTYFNFGGQGILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPN-TITITDNVTTGC 89 (390)
T ss_dssp CGGGTTSEECCTTTCCCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGG-GEEEESSHHHHH
T ss_pred cCCCCCeEEecCCccCCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcCCCHH-HEEEeCChHHHH
Confidence 444567889999888888888999888744221 0 11 1236788999999999998654 499999999999
Q ss_pred HHHHhcc-CCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCC--CCCCCChHHHHHHHhccCCCCceEEEEEecCC
Q 015729 74 ESALTNT-LSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESD--WGEGAKLDVLASKLAADTAHTIKAICIVHNET 148 (401)
Q Consensus 74 ~~~~~~~-~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~--~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n 148 (401)
..++.++ +++||+|+++.++|++.. +...++..|++++.++.+ .++.+|++++++.++ ++++++++++++|
T Consensus 90 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~----~~~~~v~~~~~~n 165 (390)
T 1elu_A 90 DIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLG----PKTRLVILSHLLW 165 (390)
T ss_dssp HHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCC----TTEEEEEEESBCT
T ss_pred HHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcC----CCceEEEEecccc
Confidence 9999988 899999999999988875 445567789999999986 466789999999886 3679999999999
Q ss_pred CcccccchHHHHHHhh----hcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhcc
Q 015729 149 ATGVTNNLSKVRKLLD----EYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKT 224 (401)
Q Consensus 149 ~tG~~~~l~~i~~l~~----~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~ 224 (401)
|||.+.|+++|.++|+ + +|+++|+|++|+.|..+.+....++|++++|.||++.++.|+|++++++++.+.+..
T Consensus 166 ptG~~~~~~~i~~l~~~~~~~--~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~ 243 (390)
T 1elu_A 166 NTGQVLPLAEIMAVCRRHQGN--YPVRVLVDGAQSAGSLPLDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGDCLGEINP 243 (390)
T ss_dssp TTCCBCCHHHHHHHHHHCCSS--SCCEEEEECTTTBTTBCCCTTTSCCSEEEEESSSTTCCCTTCEEEEECTTTGGGCCC
T ss_pred CCceecCHHHHHHHHhhhhhh--cCcEEEEEcccccCCcCCChhhcCCCEEEccccccccCCCceEEEEECHHhHhhcCC
Confidence 9999999999999999 8 999999999999888777766678999999999988888899999999988777654
Q ss_pred CCCCccc---------cchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHc-C
Q 015729 225 AKSVRVF---------FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVEAW-G 293 (401)
Q Consensus 225 ~~~~~~~---------~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~-g 293 (401)
....... +.+.+....+ ..++++...++++.++++.+...+ +++..++++++++++.+.|+++ |
T Consensus 244 ~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 318 (390)
T 1elu_A 244 TYVGWRSITYGAKGEPTGWAEGGKRF-----EVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPH 318 (390)
T ss_dssp CSCCTTTEEECTTSCEEEECSGGGGG-----CCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred ccccCCcccccccCcccccccchHhh-----CCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3211000 0000000111 234577777888888999887766 8899999999999999999997 8
Q ss_pred CccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 294 LKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
+++..+.+ ..+.++.+.++.+.+..++.+.|.++ ||.+.++. ..+++||++....+++|+++++++|++
T Consensus 319 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~~~---~~~~iRis~~~~~~~~~i~~~~~~l~~ 387 (390)
T 1elu_A 319 VHCLATSA--PQAGLVSFTVDSPLGHRAIVQKLEEQ-RIYLRTIA---DPDCIRACCHYITDEEEINHLLARLAD 387 (390)
T ss_dssp EEESCSSC--CSSSEEEEEECSSSCHHHHHHHHHHT-TEECEEET---TTTEEEEECCTTCCHHHHHHHHHHHTT
T ss_pred cEEecCcc--ccccEEEEEcCCCCCHHHHHHHHHHC-CEEEEecC---CCCeEEEecccCCCHHHHHHHHHHHHh
Confidence 77764321 23346667886666788999999765 99998875 257899998777899999999999865
No 21
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=3.7e-37 Score=291.62 Aligned_cols=329 Identities=20% Similarity=0.288 Sum_probs=265.5
Q ss_pred CCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCC--cE
Q 015729 33 EDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNF--NV 110 (401)
Q Consensus 33 ~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~--~~ 110 (401)
..|++..+.+.+.++++.+++++|.+ +.+++++|||+|++.++. .+.+||+|+++.++|++..+...++..|+ ++
T Consensus 26 ~~h~~~~~~~~~~~~~~~l~~~~~~~--~~v~~~~sgt~a~~~~~~-~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~ 102 (379)
T 3ke3_A 26 LNHMSKAFQEVMNDLLSNLKTVYNAE--AAVIIPGSGTYGMEAVAR-QLTIDEDCLIIRNGWFSYRWTQILEKGKFAKSS 102 (379)
T ss_dssp CCTTSHHHHHHHHHHHHHHHHHHTCS--EEEEEESCHHHHHHHHHH-HHCTTCEEEEEECSHHHHHHHHHHHHHCCSSEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCC--CEEEEcCChhHHHHHHHH-hCCCCCeEEEEeCCchhHHHHHHHHHhCCCCce
Confidence 44667778889999999999999987 458899999999999874 46799999999999998777667776764 77
Q ss_pred EEEeCCCC---------CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCCCcEEEEeccc
Q 015729 111 DVVESDWG---------EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDGVS 178 (401)
Q Consensus 111 ~~v~~~~~---------~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~li~D~a~ 178 (401)
+.++.+.. ..+|++++++++++ ++++++++++++|++|.+.| +++|.++|++ +|+++|+|+++
T Consensus 103 ~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~---~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~--~~~~li~D~~~ 177 (379)
T 3ke3_A 103 TVLTAERTEDTEAPKPFAPVDIETAVAKIKE---DKSAIVYAPHVETSSGIILSEEYIKALSEAVHS--VGGLLVIDCIA 177 (379)
T ss_dssp EEEECEESSCCSSCCCEECCCHHHHHHHHHH---HTCSEEEEESEETTTTEECCHHHHHHHHHHHHH--TTCEEEEECTT
T ss_pred EEEeccccccccccCCCCCCCHHHHHHHHhh---cCCcEEEEEeecCCCceeCCHHHHHHHHHHHHH--cCCEEEEEecc
Confidence 77876431 25799999999964 24689999999999999999 9999999999 99999999999
Q ss_pred ccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHH---HHHhhcC-CCCCCCCcHH
Q 015729 179 SICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDY---IKFYNLG-TFWPYTPSIQ 254 (401)
Q Consensus 179 ~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-~~~~~~~~~~ 254 (401)
+ |..+++...+++|++++|+||++++++|+|++++++++++.+.+.....+++++..+ ...++.| +.+.+|+++.
T Consensus 178 ~-g~~~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~ 256 (379)
T 3ke3_A 178 S-GCVWLDMKELGIDVLISAPQKGWSSTPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTD 256 (379)
T ss_dssp C-TTCCCCHHHHTCSEEEECTTTTTCSCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHH
T ss_pred c-CCccccccccCCCEEEecchhhcCCCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHH
Confidence 9 888888877899999999999998888999999999999988765555555554433 3445554 2345689999
Q ss_pred HHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEE
Q 015729 255 LLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSL 334 (401)
Q Consensus 255 ~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v 334 (401)
.++++.++++.+.+.|++++.++.+++++++++.|+++|+++..+. ...++.+..+..+ + ....+.+.|.++ ||.+
T Consensus 257 ~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~-~~~~~~i~~~~~~-~-~~~~~~~~L~~~-Gi~v 332 (379)
T 3ke3_A 257 SLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDKGIESVAAE-GFEAPGVVVSYTE-R-DDMHKGSAFAEA-GLQI 332 (379)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSBCT-TCBCSSEEEEECS-C-HHHHSSHHHHHT-TCCC
T ss_pred HHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCEecCCc-cccCceEEEEccC-C-cchHHHHHHHHC-CeEE
Confidence 9999999999999888999999999999999999999998886543 2345556655553 2 112235667655 9999
Q ss_pred ccCCCC-----CCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 335 GLGLNK-----VAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 335 ~~g~~~-----~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
.+|..+ ..++.+||++..++|++||++++++|++++++++
T Consensus 333 ~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 333 AAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp EECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred eCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 888643 2267899999988999999999999999998753
No 22
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=100.00 E-value=6.1e-37 Score=288.36 Aligned_cols=340 Identities=17% Similarity=0.209 Sum_probs=262.0
Q ss_pred CCCCcccccCCCcCChHHHHHHHccCcC------------CCCCccHHHHHHHHHHHHHHHhcCCCC-ceEEecCChhHH
Q 015729 6 APGKNHLFVPGPVHIPDQVIRAMNRNNE------------DYRSPAVPALTKTLLEDIKKIFKTTSG-TPFLIPTTGTGA 72 (401)
Q Consensus 6 ~~~~~~~~~~~p~~~~~~v~~a~~~~~~------------~~~~~~~~~~~~~l~~~la~~~g~~~~-~~i~~~~g~t~a 72 (401)
++++.|++.+||.++++.|++++.+... .++++...+..+++++.+++++|.++. +.+++++|+|+|
T Consensus 1 ~~~~~~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a 80 (362)
T 2c0r_A 1 MSERAYNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQ 80 (362)
T ss_dssp -CCCCEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHH
T ss_pred CCcceeeccCCCCCCCHHHHHHHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHH
Confidence 4568999999999999999999988542 233444566788999999999999754 335678999999
Q ss_pred HHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCC--CC--CCChHHHHHHHhccCCCCceEEEEEecCC
Q 015729 73 WESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDW--GE--GAKLDVLASKLAADTAHTIKAICIVHNET 148 (401)
Q Consensus 73 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~--~~d~~~le~~~~~~~~~~~~~i~~~~~~n 148 (401)
+..++.+++++||+|+++.+++++..+...++..| +++.++.+. +. .+|+++++ ++ ++++++++++++|
T Consensus 81 ~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~----~~t~~v~~~~~~n 153 (362)
T 2c0r_A 81 FAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQ----DNAAYLHLTSNET 153 (362)
T ss_dssp HHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CC----TTEEEEEEESEET
T ss_pred HHHHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cC----CCcCEEEEeCCcC
Confidence 99999999999999999988888765556677789 999998762 22 34665554 43 4689999999999
Q ss_pred Ccccc-cchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCC
Q 015729 149 ATGVT-NNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKS 227 (401)
Q Consensus 149 ~tG~~-~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~ 227 (401)
|||.+ .|+++| +|+++|+|++|+.+..+.+..+ .|++++|+||++ |++|+|++++++++.+.+.....
T Consensus 154 ~tG~~~~~l~~i--------~~~~vivD~a~~~~~~~~~~~~--~d~~~~s~~K~~-g~~G~G~l~~~~~~~~~l~~~~~ 222 (362)
T 2c0r_A 154 IEGAQFKAFPDT--------GSVPLIGDMSSDILSRPFDLNQ--FGLVYAGAQKNL-GPSGVTVVIVREDLVAESPKHLP 222 (362)
T ss_dssp TTTEECSSCCCC--------TTSCEEEECTTTTTSSCCCGGG--CSEEEEETTTTT-CCSSCEEEEEEGGGSSSCCTTSC
T ss_pred ccceeccccccc--------CCCEEEEEChhhccCCccchhH--CcEEEEeccccc-cCcCcEEEEEcHHHHhhccccCc
Confidence 99996 566665 6899999999999887766654 389999999999 58899999999988665543211
Q ss_pred CccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHcC-C-ccccCCCccC
Q 015729 228 VRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAWG-L-KNCTQKEEWF 304 (401)
Q Consensus 228 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~g-~-~~~~~~~~~~ 304 (401)
.++++..... .+ ...++++...++++.++++.+.+. ++++.+++++++++++.+.|+++| + ++..+ +...
T Consensus 223 --~~~~~~~~~~---~~-~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~ 295 (362)
T 2c0r_A 223 --TMLRYDTYVK---NN-SLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVD-VDSR 295 (362)
T ss_dssp --GGGCHHHHHH---TT-TCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSC-GGGB
T ss_pred --hHHhHHHHhh---cc-CcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCC-hHHc
Confidence 3333332221 11 234578888889999999987776 688999999999999999999886 6 65432 1223
Q ss_pred CceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 305 SDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 305 ~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+..++++.++++.+..++++.|.++ ||.+.+|... .+.+||++..+++++|+++++++|++++++.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~L~~~-gi~~~~g~~~--~~~iRis~~~~~~~e~i~~l~~~l~~~~~~~ 361 (362)
T 2c0r_A 296 SDMNITFRLASEELEKEFVKASEQE-GFVGLKGHRS--VGGLRASIYNAVPYESCEALVQFMEHFKRSR 361 (362)
T ss_dssp CSSEEEEECSCHHHHHHHHHHHHHT-TEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCcchHHHHHHHHHHC-CCeeccCCCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 4456788886545677899998766 9988777543 3569999988889999999999999988653
No 23
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=4.1e-36 Score=288.17 Aligned_cols=353 Identities=17% Similarity=0.163 Sum_probs=274.2
Q ss_pred CcccccCCCcCChHHHHHHHccCcCC-----CCC---cc--HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHh
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNED-----YRS---PA--VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT 78 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~---~~--~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~ 78 (401)
..|+..+.|.+.++.+++++.+.... +.+ +. ......++++.+++++|..+++.+++++|+|+|+..++.
T Consensus 29 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~ 108 (420)
T 1t3i_A 29 LVYLDNAATSQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAINLVAY 108 (420)
T ss_dssp CEECBTTTCCCCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHH
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHHHHHH
Confidence 46777777778889999988874422 111 21 146688999999999998333459999999999999999
Q ss_pred cc----CCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccc
Q 015729 79 NT----LSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGV 152 (401)
Q Consensus 79 ~~----~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~ 152 (401)
++ +++||+|+++.++|++.. +...++..|++++.++.+.++.+|++++++++++ ++++|++++++||||.
T Consensus 109 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~----~~~~v~~~~~~nptG~ 184 (420)
T 1t3i_A 109 SWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSE----KTKLVTVVHISNTLGC 184 (420)
T ss_dssp HTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCT----TEEEEEEESBCTTTCB
T ss_pred HhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhCC----CceEEEEeCCcccccC
Confidence 88 899999999999999864 4566778899999999987788999999999873 6799999999999999
Q ss_pred ccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCcccc
Q 015729 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFF 232 (401)
Q Consensus 153 ~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~ 232 (401)
+.|+++|.++|++ +|+++|+|++|+.+..+++....++|++++|.||.+ ++.|+|++++++++.+++........+.
T Consensus 185 ~~~l~~i~~l~~~--~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~-~~~g~G~~~~~~~~~~~~~~~~~~~~~~ 261 (420)
T 1t3i_A 185 VNPAEEIAQLAHQ--AGAKVLVDACQSAPHYPLDVQLIDCDWLVASGHKMC-APTGIGFLYGKEEILEAMPPFFGGGEMI 261 (420)
T ss_dssp BCCHHHHHHHHHH--TTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTT-SCTTCEEEEECHHHHHHSCCCSCSTTSE
T ss_pred cCCHHHHHHHHHH--cCCEEEEEhhhccCCccCchhhcCCCEEEEehhhhc-CCCceEEEEEchHHHhhcCceecCCCcc
Confidence 9999999999999 999999999999887766666667999999999955 6788999999999988876543221100
Q ss_pred c--------hHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCcc
Q 015729 233 D--------WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEW 303 (401)
Q Consensus 233 ~--------~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 303 (401)
+ +......+ ..++++...++++.++++.+.+.++++..++++++++++.+.|+++ |+++..+....
T Consensus 262 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 336 (420)
T 1t3i_A 262 AEVFFDHFTTGELPHKF-----EAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKH 336 (420)
T ss_dssp EEECSSCEEECCTTGGG-----CCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGG
T ss_pred ccccccccCCCCchhhc-----cCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccc
Confidence 0 00000011 1235777777777778888877778899999999999999999987 87776543110
Q ss_pred -CCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC-------CC-CcEEEEeecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 304 -FSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK-------VA-GKVFRIGHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 304 -~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~-------~~-~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
..+.++.+.++ +.+..++.+.|.++ ||.+.++..+ .. ++++||++...++++|+++++++|+++++++.
T Consensus 337 ~~~~~~~~~~~~-~~~~~~~~~~l~~~-gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~~~ 414 (420)
T 1t3i_A 337 GDRAALASFNVA-GLHASDVATMVDQD-GIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIRFFS 414 (420)
T ss_dssp SCBCSEEEEEET-TBCHHHHHHHHHTT-TEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred cccCCEEEEEEC-CCCHHHHHHHHHHC-CeEEeeccccchHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 12346667775 35678898888765 9999988432 11 56899999888899999999999999998764
Q ss_pred C
Q 015729 375 Y 375 (401)
Q Consensus 375 ~ 375 (401)
.
T Consensus 415 ~ 415 (420)
T 1t3i_A 415 D 415 (420)
T ss_dssp -
T ss_pred C
Confidence 3
No 24
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=100.00 E-value=3.5e-36 Score=289.08 Aligned_cols=347 Identities=14% Similarity=0.119 Sum_probs=273.4
Q ss_pred CCCCCCCcccccCCCcCChHHHHHHHccCcC--CCC------C----ccHHHHHHHHHHHHHHHhcCCCCceEEecCChh
Q 015729 3 YMYAPGKNHLFVPGPVHIPDQVIRAMNRNNE--DYR------S----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGT 70 (401)
Q Consensus 3 ~~~~~~~~~~~~~~p~~~~~~v~~a~~~~~~--~~~------~----~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t 70 (401)
....++..|++.+++.+.++.+++++.+... ... . +...+...++++.+++++|.++. .+++++|++
T Consensus 17 ~~~~~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-~v~~~~ggt 95 (423)
T 3lvm_A 17 YRAMKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPR-EIVFTSGAT 95 (423)
T ss_dssp ---CCSSEECBTTTCCCCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGG-GEEEESSHH
T ss_pred ccccCCCEeecCCCcCCCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCC-eEEEeCChH
Confidence 4456778999999999999999999998665 211 1 12345678999999999998754 499999999
Q ss_pred HHHHHHHhccC----CCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEe
Q 015729 71 GAWESALTNTL----SPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVH 145 (401)
Q Consensus 71 ~a~~~~~~~~~----~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~ 145 (401)
+|+..++.++. ++||+|+++.++|++.. .....+..|++++.++.+.++.+|++++++++++ +++++++++
T Consensus 96 ~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----~~~~v~~~~ 171 (423)
T 3lvm_A 96 ESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRD----DTILVSIMH 171 (423)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCT----TEEEEECCS
T ss_pred HHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCC----CcEEEEEeC
Confidence 99999988766 37999999999988875 2233366799999999998888999999999974 579999999
Q ss_pred cCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccC
Q 015729 146 NETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTA 225 (401)
Q Consensus 146 ~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~ 225 (401)
++||||.+.|+++|.++|++ +|++||+|++|+.+..+++....++|++++|+||++ |+.|+|+++++++..+.+...
T Consensus 172 ~~nptG~~~~l~~i~~l~~~--~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~-g~~g~G~~~~~~~~~~~~~~~ 248 (423)
T 3lvm_A 172 VNNEIGVVQDIAAIGEMCRA--RGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIY-GPKGIGALYVRRKPRVRIEAQ 248 (423)
T ss_dssp BCTTTCBBCCHHHHHHHHHH--HTCEEEEECTTTTTTSCCCTTTSCCSEEEEESTTTT-SCSSCEEEEECBTTBCCCCCS
T ss_pred CCCCCccccCHHHHHHHHHH--cCCEEEEEhhhhcCCCCcChhhcCCCEEEechHHhc-CCCCeEEEEEeccccCCCCcc
Confidence 99999999999999999999 999999999999888777777788999999999965 678899999998865554432
Q ss_pred CCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccC
Q 015729 226 KSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWF 304 (401)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~ 304 (401)
....... .....++++...++++.++++.+... +++..+++.++++++.+.|+++ |+++..+... .
T Consensus 249 ~~~~~~~-----------~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~ 315 (423)
T 3lvm_A 249 MHGGGHE-----------RGMRSGTLPVHQIVGMGEAYRIAKEE-MATEMERLRGLRNRLWNGIKDIEEVYLNGDLEH-G 315 (423)
T ss_dssp SCSSCTT-----------TTTCCSCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTT-B
T ss_pred ccCCccc-----------ccccCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccc-c
Confidence 2111000 01224467888888888888877664 7889999999999999999887 8877654332 3
Q ss_pred CceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCC-------------------CcEEEEeecccCCHHHHHHHHHH
Q 015729 305 SDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVA-------------------GKVFRIGHLGHLNELQLLGCLAG 365 (401)
Q Consensus 305 ~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~-------------------~~~~Ri~~~~~~~~~di~~~~~~ 365 (401)
.+.++.+.+ .+.+..++.+.|.+ |.+.+|..+.. ++++||++...++++|+++++++
T Consensus 316 ~~~~~~~~~-~~~~~~~l~~~l~~---i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~ 391 (423)
T 3lvm_A 316 APNILNVSF-NYVEGESLIMALKD---LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIEL 391 (423)
T ss_dssp CTTEEEEEE-TTSCHHHHHHHTTT---EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHH
T ss_pred CCCeEEEEe-CCCCHHHHHHHHhh---heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHH
Confidence 345666777 55678888888864 78877744222 36899999888899999999999
Q ss_pred HHHHHHhcC
Q 015729 366 VEMILKDVG 374 (401)
Q Consensus 366 i~~~l~~~~ 374 (401)
|+++++++.
T Consensus 392 l~~~~~~~~ 400 (423)
T 3lvm_A 392 VRKSIGRLR 400 (423)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 999998763
No 25
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=100.00 E-value=2.6e-36 Score=285.57 Aligned_cols=338 Identities=13% Similarity=0.108 Sum_probs=265.8
Q ss_pred cccccCCCcCChHHHHHHHccCcCCC-----CC----ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc
Q 015729 10 NHLFVPGPVHIPDQVIRAMNRNNEDY-----RS----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT 80 (401)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~~-----~~----~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~ 80 (401)
.|++.+++.++++.+++++.+..... .. ....+...++++.+++++|.++ +++++++|+++|+..++.++
T Consensus 2 iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-~~i~~~~g~~~a~~~~~~~~ 80 (382)
T 4hvk_A 2 AYFDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGG-GTVVFTSGATEANNLAIIGY 80 (382)
T ss_dssp CBCBTTTCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTT-EEEEEESSHHHHHHHHHHHH
T ss_pred EeecCCCcCCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCc-CeEEEECCchHHHHHHHHHh
Confidence 57888888899999999888743221 11 2235668899999999999875 45999999999999999887
Q ss_pred C----CCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc
Q 015729 81 L----SPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN 155 (401)
Q Consensus 81 ~----~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~ 155 (401)
. ++||+|+++.++|+++. ....++..|++++.++.+.++.+|++++++++++ +++++++++++||||.+.|
T Consensus 81 ~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----~~~~v~~~~~~nptG~~~~ 156 (382)
T 4hvk_A 81 AMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD----DTILVSVQHANNEIGTIQP 156 (382)
T ss_dssp HHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCT----TEEEEECCSBCTTTCBBCC
T ss_pred hhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhcc----CceEEEEECCCCCceeeCC
Confidence 6 89999999999988876 2344566799999999998888999999999974 5699999999999999999
Q ss_pred hHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchH
Q 015729 156 LSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWK 235 (401)
Q Consensus 156 l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~ 235 (401)
+++|.++|++ +|+ +|+|++|+.+..+++....++|++++|.||++ |+.|+|+++++++. .+.........
T Consensus 157 ~~~i~~l~~~--~~~-li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~-g~~g~g~~~~~~~~--~~~~~~~~~~~---- 226 (382)
T 4hvk_A 157 VEEISEVLAG--KAA-LHIDATASVGQIEVDVEKIGADMLTISSNDIY-GPKGVGALWIRKEA--KLQPVILGGGQ---- 226 (382)
T ss_dssp HHHHHHHHSS--SSE-EEEECTTTBTTBCCCHHHHTCSEEEEESGGGT-SCTTCEEEEEETTC--CCCCSSCSSCT----
T ss_pred HHHHHHHHHH--cCE-EEEEhHHhcCCCCCCchhcCCCEEEEeHHHhc-CCCceEEEEEcCcc--CcCcccccCCC----
Confidence 9999999999 999 99999999888777776678999999999965 68889999998774 22221111000
Q ss_pred HHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcC
Q 015729 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVP 314 (401)
Q Consensus 236 ~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~ 314 (401)
...+..++++...++++.++++... .++++..++.+++++++.+.|+++ |+++..+... ..+.++.+.++
T Consensus 227 -------~~~~~~~~~~~~~~~~~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~~~~~ 297 (382)
T 4hvk_A 227 -------ENGLRSGSENVPSIVGFGKAAEITA-MEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEK-RLPNNVNVRFS 297 (382)
T ss_dssp -------GGGTSCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSS-BCTTEEEEEET
T ss_pred -------cCccccCCcCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccc-cCCCEEEEEEC
Confidence 0112244678888888888888654 367889999999999999999987 7776654322 33446777774
Q ss_pred CCCCHHHHHHHHHhhCCeEEccCCCCCC-------------------CcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 315 SHINSSEIVRRAWQRYNLSLGLGLNKVA-------------------GKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 315 ~~~~~~~l~~~L~~~~~i~v~~g~~~~~-------------------~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+.+..++.+.|.++ ||.+.+|..+.. .+++||++...++++|+++++++|+++++++
T Consensus 298 -~~~~~~~~~~l~~~-gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~ 373 (382)
T 4hvk_A 298 -YIEGESIVLSLDMA-GIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERL 373 (382)
T ss_dssp -TCCHHHHHHHHHHT-TCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHC-CEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 56788999999766 999988743221 4689999988889999999999999998765
No 26
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=7.7e-36 Score=282.75 Aligned_cols=340 Identities=16% Similarity=0.138 Sum_probs=262.9
Q ss_pred cccccCCCcCChHHHHHHHccCcCCCC---------CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc
Q 015729 10 NHLFVPGPVHIPDQVIRAMNRNNEDYR---------SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT 80 (401)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~~~---------~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~ 80 (401)
.||+.++..+.++.+++++.+...... ++.......++++.+++++|.++. .+++++|+++|+..++.++
T Consensus 3 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~~g~t~a~~~~~~~~ 81 (384)
T 1eg5_A 3 VYFDNNATTRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPS-EIFFTSCATESINWILKTV 81 (384)
T ss_dssp EECBTTTCCCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGG-GEEEESCHHHHHHHHHHHH
T ss_pred EEEecCccCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCC-eEEEECCHHHHHHHHHHhh
Confidence 788888888999999999887543210 123456688999999999998654 4999999999999999887
Q ss_pred C----CCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc
Q 015729 81 L----SPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN 155 (401)
Q Consensus 81 ~----~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~ 155 (401)
. ++||+|+++.++|++.. ....++..|++++.++.+.++.+|++++++++++ +++++++++++||||.+.|
T Consensus 82 ~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----~~~~v~~~~~~nptG~~~~ 157 (384)
T 1eg5_A 82 AETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDE----DTFLVSIMAANNEVGTIQP 157 (384)
T ss_dssp HHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCT----TEEEEEEESBCTTTCBBCC
T ss_pred hhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCC----CCeEEEEECCCCCcccccC
Confidence 6 79999999999888765 2334467899999999988888999999999873 6799999999999999999
Q ss_pred hHHHHHHhhhcCCC--cEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccc
Q 015729 156 LSKVRKLLDEYRHP--ALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFD 233 (401)
Q Consensus 156 l~~i~~l~~~~~~~--~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~ 233 (401)
+++|.++|++ +| ++||+|++|+++..+++....++|++++|.||++ +++|+|+++++++. .+....... ..
T Consensus 158 ~~~i~~l~~~--~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~-g~~G~G~~~~~~~~--~~~~~~~~~-~~- 230 (384)
T 1eg5_A 158 VEDVTRIVKK--KNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFH-GPKGVGITYIRKGV--PIRPLIHGG-GQ- 230 (384)
T ss_dssp HHHHHHHHHH--HCTTCEEEEECTTTTTTSCCCCTTTCCSEEEEEGGGGT-SCTTCEEEEECTTS--CCCCSBCSS-CT-
T ss_pred HHHHHHHHHh--cCCceEEEEEhhhhcCCcccCchhcCCCEEEecHHHhc-CCCceEEEEEcCCC--ccccccccC-cc-
Confidence 9999999999 88 9999999999877666666667999999999975 67789999998874 112110000 00
Q ss_pred hHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEc
Q 015729 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIV 313 (401)
Q Consensus 234 ~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 313 (401)
...+..++++...++++.++++...+ ++++..+++.++++++.+.|++.|+++..+... ..+.++++.+
T Consensus 231 ---------~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~~~~~~~ 299 (384)
T 1eg5_A 231 ---------ERGLRSGTQNVPGIVGAARAMEIAVE-ELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEI-SLPNTLSVSF 299 (384)
T ss_dssp ---------TTTTBCSCCCHHHHHHHHHHHHHHHH-THHHHHHHHHHHHHHHHHHHHTTTCEECSCTTS-BCTTEEEEEC
T ss_pred ---------cccccCCCCChHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHhCCCCeEEeCCccc-CCCCEEEEEe
Confidence 00122446778777888888887543 578899999999999999998878777553221 2345677777
Q ss_pred CCCCCHHHHHHHHHhhCCeEEccCCCCC-------------------CCcEEEEeecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 314 PSHINSSEIVRRAWQRYNLSLGLGLNKV-------------------AGKVFRIGHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 314 ~~~~~~~~l~~~L~~~~~i~v~~g~~~~-------------------~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
+ +.+..++.+.|.++ ||.+.+|..+. ..+++||++...++++|+++++++|+++++++.
T Consensus 300 ~-~~~~~~~~~~l~~~-gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 377 (384)
T 1eg5_A 300 P-NIRGSTLQNLLSGY-GIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFLD 377 (384)
T ss_dssp T-TCCHHHHHHHHHHT-TEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC-
T ss_pred C-CCCHHHHHHHHhhC-CeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 5 45788899998755 99999874321 136899998877899999999999999998764
No 27
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=100.00 E-value=3e-36 Score=285.45 Aligned_cols=338 Identities=14% Similarity=0.115 Sum_probs=262.8
Q ss_pred cccccCCCcCChHHHHHHHccCcCC-----CCCc----cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc
Q 015729 10 NHLFVPGPVHIPDQVIRAMNRNNED-----YRSP----AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT 80 (401)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~~----~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~ 80 (401)
.|++.+++++.++.|++++.+.... +..+ ...+...++++.+++++|.++ +.+++++|+++|+..++.++
T Consensus 2 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~-~~v~~~~g~t~a~~~~~~~l 80 (382)
T 4eb5_A 2 AYFDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGG-GTVVFTSGATEANNLAIIGY 80 (382)
T ss_dssp CBCBTTTCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTT-EEEEEESSHHHHHHHHHHHH
T ss_pred eeeccCCCCCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCC-CeEEEcCchHHHHHHHHHHH
Confidence 5888888889999999998875432 1112 234678899999999999864 45999999999999999887
Q ss_pred C----CCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc
Q 015729 81 L----SPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN 155 (401)
Q Consensus 81 ~----~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~ 155 (401)
. ++||+|+++.++|++.. ....++..|++++.++.+.++.+|++++++++++ +++++++++++||||.+.|
T Consensus 81 ~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----~~~~v~~~~~~nptG~~~~ 156 (382)
T 4eb5_A 81 AMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD----DTILVSVQHANNEIGTIQP 156 (382)
T ss_dssp HHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCCT----TEEEEECCSBCTTTCBBCC
T ss_pred HhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhcC----CCeEEEEeccCCCccccCC
Confidence 6 89999999999988775 2233445799999999988888999999999874 5799999999999999999
Q ss_pred hHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchH
Q 015729 156 LSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWK 235 (401)
Q Consensus 156 l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~ 235 (401)
+++|.++|++ +|++ |+|++|+++..+++....++|++++|+||++ |+.|+|+++++++. .+.........
T Consensus 157 l~~i~~l~~~--~~~~-i~D~a~~~g~~~~~~~~~~~di~~~s~sK~~-g~~g~G~~~~~~~~--~l~~~~~~~~~---- 226 (382)
T 4eb5_A 157 VEEISEVLAG--KAAL-HIDATASVGQIEVDVEKIGADMLTISSNDIY-GPKGVGALWIRKEA--KLQPVILGGGQ---- 226 (382)
T ss_dssp HHHHHHHHTT--SSEE-EEECTTTBTTBCCCHHHHTCSEEEEETGGGT-CCSSCEEEEEETTC--CCCCSSCSSCT----
T ss_pred HHHHHHHHHH--CCCE-EEEcchhcCCcccCccccCCCEEEeehHHhc-CCCceEEEEEcccc--ccCceecCCCc----
Confidence 9999999999 9999 9999999877666655557899999999975 67789999998763 12211100000
Q ss_pred HHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcC
Q 015729 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVP 314 (401)
Q Consensus 236 ~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~ 314 (401)
.. .+..++++...++++.++++.+.+ ++++..++++++++++.+.|+++ |+++..+... ..+.++++.++
T Consensus 227 --~~-----~~~~~~~~~~~~~~~~~al~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~~~~~ 297 (382)
T 4eb5_A 227 --EN-----GLRSGSENVPSIVGFGKAAEITAM-EWREEAERLRRLRDRIIDNVLKIEESYLNGHPEK-RLPNNVNVRFS 297 (382)
T ss_dssp --GG-----GTSCSCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSS-BCTTEEEEEET
T ss_pred --cc-----cccCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCccc-CCCCEEEEEeC
Confidence 00 122345777777888888887665 57889999999999999999887 7766543221 23446778885
Q ss_pred CCCCHHHHHHHHHhhCCeEEccCCCCC-------------------CCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 315 SHINSSEIVRRAWQRYNLSLGLGLNKV-------------------AGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 315 ~~~~~~~l~~~L~~~~~i~v~~g~~~~-------------------~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+.+..++.+.|.++ ||.+.+|..+. ..+++||++...++++|+++++++|+++++++
T Consensus 298 -~~~~~~~~~~l~~~-gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (382)
T 4eb5_A 298 -YIEGESIVLSLDMA-GIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERL 373 (382)
T ss_dssp -TSCHHHHHHHHHHH-TCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred -CcCHHHHHHHHHHC-CEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 56788999999866 99998875311 14689999887789999999999999998764
No 28
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.8e-35 Score=279.60 Aligned_cols=344 Identities=13% Similarity=0.092 Sum_probs=266.7
Q ss_pred CCCCC-CCcccccCCCcCChHHHHHHHccCcCCC-----CCcc----HHHHHHHHHHHHHHHhcCCCCceEEecCChhHH
Q 015729 3 YMYAP-GKNHLFVPGPVHIPDQVIRAMNRNNEDY-----RSPA----VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGA 72 (401)
Q Consensus 3 ~~~~~-~~~~~~~~~p~~~~~~v~~a~~~~~~~~-----~~~~----~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a 72 (401)
|+... +..|++.+++.+.++.+++++.+..... ..+. ..+...++++.+++++|.++. .+++++|+|++
T Consensus 20 fp~~~~~~~~ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~~g~t~a 98 (406)
T 3cai_A 20 HPSLGDGWVHFDAPAGMLIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPG-GVVLGADRAVL 98 (406)
T ss_dssp CTTTTSSCEECBGGGCCCCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCGG-GEEEESCHHHH
T ss_pred hhhcCCCeEEEeCCCcCCCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCChHHH
Confidence 44444 4789999988899999999988743211 1121 356788999999999998643 49999999999
Q ss_pred HHHHHhcc---CCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCC-CCCCCChHHHHHHHhccCCCCceEEEEEec
Q 015729 73 WESALTNT---LSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESD-WGEGAKLDVLASKLAADTAHTIKAICIVHN 146 (401)
Q Consensus 73 ~~~~~~~~---~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~-~~~~~d~~~le~~~~~~~~~~~~~i~~~~~ 146 (401)
+..++.++ +++||+|+++.++|++.. +..+++..|++++.++.+ .++.+|++++++++++ ++++|+++++
T Consensus 99 l~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~~----~~~~v~~~~~ 174 (406)
T 3cai_A 99 LSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISK----STRLVAVNSA 174 (406)
T ss_dssp HHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCCT----TEEEEEEESB
T ss_pred HHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhCC----CceEEEEeCC
Confidence 99988776 789999999999988764 334455579999999987 5677899999999863 6799999999
Q ss_pred CCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcce-EEEecHHHHHHhccC
Q 015729 147 ETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMG-IVCASPKALEASKTA 225 (401)
Q Consensus 147 ~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G-~l~~~~~~~~~~~~~ 225 (401)
+||||.+.|+++|.++|++ +|+++|+|++|+.+..+++....++|++++|+||++ |+. +| ++++++++.+++...
T Consensus 175 ~nptG~~~~l~~i~~l~~~--~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~~-g~~-~G~~~~~~~~~~~~l~~~ 250 (406)
T 3cai_A 175 SGTLGGVTDLRAMTKLVHD--VGALVVVDHSAAAPYRLLDIRETDADVVTVNAHAWG-GPP-IGAMVFRDPSVMNSFGSV 250 (406)
T ss_dssp CTTTCBBCCCHHHHHHHHH--TTCEEEEECTTTTTTCCCCHHHHCCSEEEEEGGGGT-SCS-CEEEEESCHHHHHTSCCC
T ss_pred cCCccccCCHHHHHHHHHH--cCCEEEEEcccccCCCCCCchhcCCCEEEeehhhhc-CCC-cCeEEEEehHHHhhcCCc
Confidence 9999999999999999999 999999999999887766666668999999999976 454 88 999999988777643
Q ss_pred CCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhc--------------HHHHHHHHHHHHHHHHHHHHH
Q 015729 226 KSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG--------------LENVIERHRRLGKATRLAVEA 291 (401)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g--------------~~~~~~~~~~~~~~l~~~L~~ 291 (401)
... +.. .....+ ..++++...++++.++++.+...| +++..++..++++++.+.|++
T Consensus 251 ~~~---~~~-~~~~~~-----~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 321 (406)
T 3cai_A 251 STN---PYA-TGPARL-----EIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRS 321 (406)
T ss_dssp CSC---TTC-CGGGGG-----CCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccC---CCC-Cccccc-----cCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 210 000 000111 234588888888888898876543 678888999999999999998
Q ss_pred c-CCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCC--------C-CCCcEEEEeecccCCHHHHHH
Q 015729 292 W-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLN--------K-VAGKVFRIGHLGHLNELQLLG 361 (401)
Q Consensus 292 ~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~--------~-~~~~~~Ri~~~~~~~~~di~~ 361 (401)
+ |+++..+.. ...+ ++++.++ +.+..++.+.|.++ ||.+.+|.. . ...+++||++...++++|+++
T Consensus 322 ~~~~~~~~~~~-~~~~-~~~~~~~-~~~~~~~~~~L~~~-gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~ 397 (406)
T 3cai_A 322 LPLVMLIGRPE-AQIP-VVSFAVH-KVPADRVVQRLADN-GILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQ 397 (406)
T ss_dssp CTTEEECCCCS-SBCS-EEEEEET-TBCHHHHHHHHHHT-TEECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHH
T ss_pred CCCeEEcCCcc-ccCC-EEEEEEC-CcCHHHHHHHHHHC-CcEEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHHHH
Confidence 7 776655332 1344 6778885 45788899999765 999988751 1 124689999988889999999
Q ss_pred HHHHHHH
Q 015729 362 CLAGVEM 368 (401)
Q Consensus 362 ~~~~i~~ 368 (401)
++++|++
T Consensus 398 ~~~~l~~ 404 (406)
T 3cai_A 398 LVRALAS 404 (406)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 9999875
No 29
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=100.00 E-value=7.5e-36 Score=290.31 Aligned_cols=349 Identities=12% Similarity=0.047 Sum_probs=268.9
Q ss_pred CCcccccCCCcCChHHHHHHHccCc--------CCCC--CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHH
Q 015729 8 GKNHLFVPGPVHIPDQVIRAMNRNN--------EDYR--SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESAL 77 (401)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~--------~~~~--~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~ 77 (401)
+..|+++.+..+.++.+.+++.+.. ..+. .+.+.+...++++.+++++|.++. ++++++|+|++++.++
T Consensus 67 ~~iyld~~~~g~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~t~g~t~al~~~~ 145 (465)
T 3e9k_A 67 NAIYFLGNSLGLQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEK-EIALMNALTVNLHLLM 145 (465)
T ss_dssp BCEECBTTTSCCEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGG-GEEECSCHHHHHHHHH
T ss_pred CeEEecCCccCCChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcC-CEEEECCHHHHHHHHH
Confidence 5678888877666666655444311 1111 123445667899999999999754 4999999999999999
Q ss_pred hccCCCCCe---EEEEcCCcchHH--HHHHHHHcCCcE-----EEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecC
Q 015729 78 TNTLSPGDR---IISFLIGQFSLL--WIDQQQRLNFNV-----DVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNE 147 (401)
Q Consensus 78 ~~~~~~gd~---vl~~~~~~~~~~--~~~~~~~~g~~~-----~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~ 147 (401)
.++++++++ |++..++|++.. +...++..|+++ ..++.+.++.+|++++++++++.+ +++++|++++++
T Consensus 146 ~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~-~~~~lv~~~~~~ 224 (465)
T 3e9k_A 146 LSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEG-DSIAVILFSGVH 224 (465)
T ss_dssp HHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHG-GGEEEEEEESBC
T ss_pred HHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcC-CCeEEEEEeCcc
Confidence 888876655 999999998865 455677788875 344556667889999999997532 367999999999
Q ss_pred CCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCC
Q 015729 148 TATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAK 226 (401)
Q Consensus 148 n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~ 226 (401)
||||.+.|+++|.++|++ +|+++|+|++|+.|..+++...+++|++++|+||+++ |+.|+|++++++++.+.+.+..
T Consensus 225 n~tG~~~~l~~i~~la~~--~g~~vi~D~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~ 302 (465)
T 3e9k_A 225 FYTGQHFNIPAITKAGQA--KGCYVGFDLAHAVGNVELYLHDWGVDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIKPAL 302 (465)
T ss_dssp TTTCBBCCHHHHHHHHHH--TTCEEEEECTTTTTTSCCCHHHHTCCEEEECSSSTTCCCTTCCCEEEECGGGTTTSCCSS
T ss_pred cCcceeecHHHHHHHHHH--cCCEEEEEhhhhcCCcCCchhhcCCCEEEECcccccccCCCceEEEEEcHHHHhhcCCcc
Confidence 999999999999999999 9999999999999998888888899999999999995 5667899999999877665443
Q ss_pred CCccccc------------hHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH---
Q 015729 227 SVRVFFD------------WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEA--- 291 (401)
Q Consensus 227 ~~~~~~~------------~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~--- 291 (401)
....... +......++ .++++...++++.++++.+...++++++++..++++++.+.|++
T Consensus 303 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 377 (465)
T 3e9k_A 303 VGWFGHELSTRFKMDNKLQLIPGVCGFR-----ISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYG 377 (465)
T ss_dssp CCGGGBCHHHHTTCCSCCCBCSSGGGGC-----CSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred cCccCCCCCcccccCCCcCcCCChHHhc-----cCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 2111010 000111222 33699999999999999998888999999999999999999988
Q ss_pred --------cCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEee-cccCCHHHHHHH
Q 015729 292 --------WGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGH-LGHLNELQLLGC 362 (401)
Q Consensus 292 --------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~-~~~~~~~di~~~ 362 (401)
.|+++..+.+....+.++++.++ .+..++.+.|.++ ||.+... .++++||++ ..+++++|++++
T Consensus 378 ~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~--~~~~~l~~~L~~~-Gi~v~~~----~~~~iRis~~~~~~t~edi~~~ 450 (465)
T 3e9k_A 378 KDKAATKKPVVNIITPSHVEERGCQLTITFS--VPNKDVFQELEKR-GVVCDKR----NPNGIRVAPVPLYNSFHDVYKF 450 (465)
T ss_dssp ---------CEEECSCSSGGGBCSCEEEEEC--CTTCCHHHHHHTT-TEECEEE----TTTEEEEBCCTTTCCHHHHHHH
T ss_pred ccccccCCCCeEEeCCCCHhhcccEEEEEec--CCHHHHHHHHHHC-CEEEecC----CCCEEEEeCcccCCCHHHHHHH
Confidence 47777665433234557778885 3567889999876 9987622 357999998 678999999999
Q ss_pred HHHHHHHHHh
Q 015729 363 LAGVEMILKD 372 (401)
Q Consensus 363 ~~~i~~~l~~ 372 (401)
+++|++++++
T Consensus 451 ~~~l~~~l~~ 460 (465)
T 3e9k_A 451 TNLLTSILDS 460 (465)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHHh
Confidence 9999999865
No 30
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=100.00 E-value=1.7e-34 Score=275.17 Aligned_cols=344 Identities=15% Similarity=0.185 Sum_probs=259.4
Q ss_pred CcccccCCCcCChHHHHHHHccC---cCC--CCCccHHHHHHHHHHHHHHHhcCCCCceEEe-cCChhHHHHHHHhccCC
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRN---NED--YRSPAVPALTKTLLEDIKKIFKTTSGTPFLI-PTTGTGAWESALTNTLS 82 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~---~~~--~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~-~~g~t~a~~~~~~~~~~ 82 (401)
..|+|.+||.++++.|++++.+. ... ++++.+.+...++++.+++++|.+.++++++ ++|+|+|++.++.++++
T Consensus 40 ~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~~ 119 (398)
T 2fyf_A 40 RDGRFGSGPSKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLID 119 (398)
T ss_dssp SSCBCCSSSCCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTCS
T ss_pred CCccccCCCCCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhcC
Confidence 57899999999999999999883 221 3445555678899999999999985456888 99999999999999888
Q ss_pred CCCeEEEEcCCcchHHHHHHHHHc--CCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHH
Q 015729 83 PGDRIISFLIGQFSLLWIDQQQRL--NFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVR 160 (401)
Q Consensus 83 ~gd~vl~~~~~~~~~~~~~~~~~~--g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~ 160 (401)
+| ++++..+.|+..+...+... |++++.++.+.+...+. + ++ +++++|++++++||||.+.|+++|.
T Consensus 120 ~g--v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~g~~~~~-~----i~----~~~~~v~~~~~~nptG~~~~~~~i~ 188 (398)
T 2fyf_A 120 KR--SLHLTYGEFSAKFASAVSKNPFVGEPIIITSDPGSAPEP-Q----TD----PSVDVIAWAHNETSTGVAVAVRRPE 188 (398)
T ss_dssp SC--EEEEECSHHHHHHHHHHHHCTTSCCCEEEECCTTCCCCC-C----CC----TTCSEEEEESEETTTTEECCCCCCT
T ss_pred CC--eEEEeCCHHHHHHHHHHHHhCCCCceEEEecCCCCCCCc-c----cc----CCCCEEEEeCcCCCcceecchHHhh
Confidence 86 33334555654433445555 88999999874333332 1 22 4679999999999999999998887
Q ss_pred HHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCC----CCccccchHH
Q 015729 161 KLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAK----SVRVFFDWKD 236 (401)
Q Consensus 161 ~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~----~~~~~~~~~~ 236 (401)
++ +|+++|+|++|+.+..+.+.. ++|++++|+||+++++.|+|++++++++++++.... ....+.+...
T Consensus 189 ~~-----~~~~vivD~a~~~~~~~~~~~--~~di~~~s~sK~~~~~gg~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 261 (398)
T 2fyf_A 189 GS-----DDALVVIDATSGAGGLPVDIA--ETDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPI 261 (398)
T ss_dssp TC-----C-CEEEEECTTTTTTSCCCGG--GCSEEEECTTSTTCSCSSEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHH
T ss_pred hh-----cCCeEEEEeccccCCcccCcc--cCcEEEEecCcccCCCCceEEEEECHHHHHHhhcccccCCCCCcEEehHH
Confidence 65 789999999999888766654 489999999999965557899999999887763210 0011233332
Q ss_pred HHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcC
Q 015729 237 YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVP 314 (401)
Q Consensus 237 ~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~ 314 (401)
....+..+ +..++++...++++.++++.+.+.| +++..+++.++++++.+.|+++ |+++..+.+...++.++++.+|
T Consensus 262 ~~~~~~~~-~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~ 340 (398)
T 2fyf_A 262 AVENSLKN-QTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFV 340 (398)
T ss_dssp HHHHHTTT-CCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEEC
T ss_pred HhhhcccC-CCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEECC
Confidence 22222222 2345788888888999999887776 8999999999999999999998 7777642121235557888887
Q ss_pred CCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 315 SHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 315 ~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
++.+..++.+.|.++ ||.+++++....++++||++..+++++|+++++++|++++++
T Consensus 341 ~~~~~~~l~~~L~~~-gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 341 DDVDAGTVAKILRAN-GIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp TTSCHHHHHHHHHHT-TCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHC-CcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 777888999999877 999988754334578999998888999999999999998865
No 31
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=100.00 E-value=2e-35 Score=281.71 Aligned_cols=340 Identities=13% Similarity=0.144 Sum_probs=246.1
Q ss_pred CCcccccCCCcCChHHHHHHHccCcCC-----CC----CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHh
Q 015729 8 GKNHLFVPGPVHIPDQVIRAMNRNNED-----YR----SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT 78 (401)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~~~-----~~----~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~ 78 (401)
+..|++.+++.++++.+++++.+.... .. +....+...++++.+++++|.++. .+++++|+++|+..++.
T Consensus 20 ~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-~v~~~~g~t~al~~~~~ 98 (400)
T 3vax_A 20 HMTYLDAAATTRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPD-ELIFTSGATESNNIALL 98 (400)
T ss_dssp --CCCCCCCCSSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGG-GEEEESCHHHHHHHHHH
T ss_pred CcEEecCCCCCCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCC-cEEEeCCHHHHHHHHHH
Confidence 468999999999999999998885421 11 122345688999999999998754 49999999999999998
Q ss_pred ccC----CCCC-eEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccc
Q 015729 79 NTL----SPGD-RIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGV 152 (401)
Q Consensus 79 ~~~----~~gd-~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~ 152 (401)
+++ ++|| +|+++.++|+++. ........|++++.++.+.++.+|++++++++++ +++++++++++||||.
T Consensus 99 ~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----~~~~v~~~~~~nptG~ 174 (400)
T 3vax_A 99 GLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLRP----DTLLVSLMHVNNETGV 174 (400)
T ss_dssp TTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCCT----TEEEEECCSBCTTTCB
T ss_pred HHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcCC----CceEEEEECCCCCcee
Confidence 887 8999 9999999888865 2233455799999999998888999999998874 6799999999999999
Q ss_pred ccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEE-ecHHHHH----HhccCCC
Q 015729 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVC-ASPKALE----ASKTAKS 227 (401)
Q Consensus 153 ~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~-~~~~~~~----~~~~~~~ 227 (401)
+.|+++|.++|++ +|+++|+|++|+.+..+.+.... +|++++|.||. .|+.|+|+++ ++++.+. .+.....
T Consensus 175 ~~~l~~i~~la~~--~~~~li~D~a~~~~~~~~~~~~~-~d~~~~s~~K~-~g~~g~g~~~~~~~~~~~~~~~~~~~~~~ 250 (400)
T 3vax_A 175 IQPVAELAQQLRA--TPTYLHVDAAQGYGKVPGDLTTP-IDMISISGHKI-GAPKGVGALVTRRREEMDDERVPLEPIMF 250 (400)
T ss_dssp BCCHHHHHHHHTT--SSCEEEEECTTTTTTSGGGGGSC-CSEEEEETGGG-TSCSSCEEEEECBCSSSTTCBCCCCCSSC
T ss_pred eCcHHHHHHHHHh--cCCEEEEEhhhhcCCCCcChhhc-CcEEEEeHHHh-CCCCceEEEEEecchhccccccccCceec
Confidence 9999999999999 99999999999988877777666 99999999994 5688899999 8873211 1211110
Q ss_pred CccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCce
Q 015729 228 VRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDT 307 (401)
Q Consensus 228 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 307 (401)
.... . ..+..++++...++++.++++.+.+ ++++..+++.++++++.+.|+..|+++..+... ..+.
T Consensus 251 ~~~~----------~-~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~ 317 (400)
T 3vax_A 251 GGGQ----------E-RKLRPGTLPVPLIMGLAEAAKIFEA-EHAQWQVAAQDLRSRLLAGLASTSFQVNGDQDH-VVPH 317 (400)
T ss_dssp SSCT----------G-GGTSCSCCCHHHHHHHHHHHHHHHH-SHHHHHHHHHHHHHHHHHHHTTTTCEECSCTTS-BCTT
T ss_pred CCCc----------e-eeeecCCCCHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHhhCCCCEEEeCCccc-CCCC
Confidence 0000 0 0122446788888888888887655 678899999999999999998337877664432 3345
Q ss_pred eEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCC-------------------CcEEEEee-cccCCHHHHHHHHHHHH
Q 015729 308 VTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVA-------------------GKVFRIGH-LGHLNELQLLGCLAGVE 367 (401)
Q Consensus 308 ~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~-------------------~~~~Ri~~-~~~~~~~di~~~~~~i~ 367 (401)
++.+.++ +.+..++.+.|. + ||.+++|..+.. ++++||++ ....+++|+++++++|+
T Consensus 318 ~~~~~~~-~~~~~~l~~~L~-~-gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~ 394 (400)
T 3vax_A 318 ILNLSFE-DVDAEAFLVTLK-D-LVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVA 394 (400)
T ss_dssp EEEEECT-TCCHHHHHHHHH-H-HHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC---------------
T ss_pred EEEEEeC-CCCHHHHHHHHh-c-CcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHH
Confidence 6777775 567889999998 6 998887642211 37899999 77889999999999999
Q ss_pred HHHHh
Q 015729 368 MILKD 372 (401)
Q Consensus 368 ~~l~~ 372 (401)
+++++
T Consensus 395 ~~~~~ 399 (400)
T 3vax_A 395 KLKPS 399 (400)
T ss_dssp -----
T ss_pred HHhcc
Confidence 88753
No 32
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=100.00 E-value=1.7e-35 Score=279.20 Aligned_cols=341 Identities=12% Similarity=0.090 Sum_probs=258.8
Q ss_pred CCCCccccc-CCCcCChHHHHHHHccCcCCC----------CCccHHHHHHHHHHH-HHHHhcCCCCceEEecCChhHHH
Q 015729 6 APGKNHLFV-PGPVHIPDQVIRAMNRNNEDY----------RSPAVPALTKTLLED-IKKIFKTTSGTPFLIPTTGTGAW 73 (401)
Q Consensus 6 ~~~~~~~~~-~~p~~~~~~v~~a~~~~~~~~----------~~~~~~~~~~~l~~~-la~~~g~~~~~~i~~~~g~t~a~ 73 (401)
.|+-.|++. .+..++++.+++++.+..... ..+...+...++++. +++++|.+ .+++++|+|+|+
T Consensus 6 ~~~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~~---~v~~~~g~t~a~ 82 (371)
T 2e7j_A 6 TKDFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCD---VARVTNGAREAK 82 (371)
T ss_dssp --CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSS---EEEEESSHHHHH
T ss_pred CCCcEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCCC---EEEEeCChHHHH
Confidence 455667777 556778899999998865321 123345568899999 99999987 599999999999
Q ss_pred HHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEe--CCCCCCCChHHHHHHHhccCC-CCceEEEEEecCCCc
Q 015729 74 ESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVE--SDWGEGAKLDVLASKLAADTA-HTIKAICIVHNETAT 150 (401)
Q Consensus 74 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~--~~~~~~~d~~~le~~~~~~~~-~~~~~i~~~~~~n~t 150 (401)
..++.+++++||+|+++.++|++... .++..|++++.++ .+.++.+|++++++++++... ++++++++++++|||
T Consensus 83 ~~~~~~~~~~gd~vl~~~~~~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~npt 160 (371)
T 2e7j_A 83 FAVMHSLAKKDAWVVMDENCHYSSYV--AAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNY 160 (371)
T ss_dssp HHHHHHHCCTTCEEEEETTCCHHHHH--HHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTT
T ss_pred HHHHHHHhCCCCEEEEccCcchHHHH--HHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCC
Confidence 99999889999999999999888763 3677899999999 777788999999999974210 257999999999999
Q ss_pred ccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHH-hccCCCCc
Q 015729 151 GVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEA-SKTAKSVR 229 (401)
Q Consensus 151 G~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~-~~~~~~~~ 229 (401)
|.+.|+++|.++|++ +|+++|+|++|+.+..+.+....++|++++|.||+++++.++|++++++++.+. +......
T Consensus 161 G~~~~~~~i~~~~~~--~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~~~G~~~~~~~~~~~~~~~~~~~- 237 (371)
T 2e7j_A 161 GNLPDVKKIAKVCSE--YDVPLLVNGAYAIGRMPVSLKEIGADFIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSEKY- 237 (371)
T ss_dssp CCCCCHHHHHHHHHT--TTCCEEEECTTTBTTBCCCHHHHTCSEEEEEHHHHSSCCSSCEEEEECTTTTTTTTCBCSSC-
T ss_pred cccCCHHHHHHHHHH--cCCeEEEECccccCCCCCChhhcCCCEEEecCCcCCCCCCCcEEEEEechhhhhhccccccC-
Confidence 999999999999999 999999999999887766666667899999999999887889999999987666 5543220
Q ss_pred cccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHH--HHHHHHHHHHHHHcCCccccCCCccCCce
Q 015729 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERH--RRLGKATRLAVEAWGLKNCTQKEEWFSDT 307 (401)
Q Consensus 230 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~--~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 307 (401)
...+ ..+ ..++++...++++.++++.+.. +..++. .++++++.+.|+++|+++..+... .+.
T Consensus 238 ~~~~-----~~~-----~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~~~ 301 (371)
T 2e7j_A 238 KNKE-----VEL-----LGCTARGATIITLMASFPHVRE----RIKRWDEEVEKARRFAAEMEKLGIKQLGDNPH--NHD 301 (371)
T ss_dssp TTSB-----GGG-----TTCCCCSHHHHHHHHHHHHHHH----HGGGHHHHHHHHHHHHHHHHHTTCEEESSSSC--CSS
T ss_pred cccc-----ccc-----ccCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcCcEEecCCCc--cCc
Confidence 0000 001 1345777777777788877654 456666 888899999998888777654221 234
Q ss_pred eEEEEcCCCCCHHHHHHHHHhhCCeEEccCCC-----CCCCcEEE-Eeeccc-CCHHHHHHHHHHHHHHHHhcC
Q 015729 308 VTAVIVPSHINSSEIVRRAWQRYNLSLGLGLN-----KVAGKVFR-IGHLGH-LNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 308 ~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~-----~~~~~~~R-i~~~~~-~~~~di~~~~~~i~~~l~~~~ 374 (401)
++++.++ +..++.+.|.++ ||.+.+... ...++++| +++... ++++|+++++++|++++++++
T Consensus 302 ~~~~~~~---~~~~~~~~l~~~-gi~~~~~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~~~ 371 (371)
T 2e7j_A 302 LMFFHAE---VLYEISKKAKGG-RFFLYRELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKYS 371 (371)
T ss_dssp EEEEECH---HHHHHHHHSSSG-GGHHHHHHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHCC
T ss_pred eEEEECC---CHHHHHHHHHHC-CEEEEeccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHhcC
Confidence 7888885 567888888755 998876211 11256899 988876 899999999999999988753
No 33
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=100.00 E-value=6.2e-34 Score=272.79 Aligned_cols=351 Identities=16% Similarity=0.138 Sum_probs=259.4
Q ss_pred CCCCCCCcccccCCCcCChHHHHHHHccCcCCCCC-c--------cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHH
Q 015729 3 YMYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDYRS-P--------AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAW 73 (401)
Q Consensus 3 ~~~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~-~--------~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~ 73 (401)
|+..++..|++..++.+.++.+++++.+......+ + ...+...++++.+++++|.++. .+++++|+++++
T Consensus 23 f~~~~~~~yld~~~~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~~g~t~al 101 (416)
T 1qz9_A 23 FALPEGVIYLDGNSLGARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARDG-EVVVTDTTSINL 101 (416)
T ss_dssp BCCCTTCEECCTTTSCCCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTT-SEEECSCHHHHH
T ss_pred CCCCCCeEeecCCCcCCCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCCCcc-cEEEeCChhHHH
Confidence 45557789999888888888888888775432111 1 1235678999999999998653 489999999999
Q ss_pred HHHHhccC------CCCCeEEEEcC-CcchHH--HHHHHHHc--CCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEE
Q 015729 74 ESALTNTL------SPGDRIISFLI-GQFSLL--WIDQQQRL--NFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAIC 142 (401)
Q Consensus 74 ~~~~~~~~------~~gd~vl~~~~-~~~~~~--~~~~~~~~--g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~ 142 (401)
..++.+++ ++||++++..+ .|.++. +...++.. |++++.++. +++++++++ +++++++
T Consensus 102 ~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~~~l~~~i~----~~~~~v~ 170 (416)
T 1qz9_A 102 FKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS-------PEELPQAID----QDTAVVM 170 (416)
T ss_dssp HHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS-------GGGHHHHCS----TTEEEEE
T ss_pred HHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc-------HHHHHHHhC----CCceEEE
Confidence 88887765 89998666655 444433 22344445 889988885 788998886 3679999
Q ss_pred EEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcc-eEEEecHHHHHH
Q 015729 143 IVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGM-GIVCASPKALEA 221 (401)
Q Consensus 143 ~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~-G~l~~~~~~~~~ 221 (401)
+++++||||.+.|+++|.++|++ +|+++|+|++|+.|..+.+....++|++++|+||++.+++|+ |++++++++.+.
T Consensus 171 ~~~~~nptG~~~~l~~i~~l~~~--~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~g~~~~g~l~~~~~~~~~ 248 (416)
T 1qz9_A 171 LTHVNYKTGYMHDMQALTALSHE--CGALAIWDLAHSAGAVPVDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQLCDL 248 (416)
T ss_dssp EESBCTTTCBBCCHHHHHHHHHH--HTCEEEEECTTTTTTSCCCHHHHTCSEEEECSSSTTCCCTTCCCEEEECTTTTTT
T ss_pred EeccccCcccccCHHHHHHHHHH--cCCEEEEEccccccCcCCChhhcCCCEEEecCcccCCCCCCCeEEEEECHHHHhc
Confidence 99999999999999999999999 999999999999887766655567899999999998777888 999999988766
Q ss_pred hccCCCCccc----cchHHHHHHhh-cCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc----
Q 015729 222 SKTAKSVRVF----FDWKDYIKFYN-LGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW---- 292 (401)
Q Consensus 222 ~~~~~~~~~~----~~~~~~~~~~~-~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~---- 292 (401)
+......... +++........ ...+..++++...++++.++++.+.+.++++..+++.++++++.+.|+++
T Consensus 249 l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 328 (416)
T 1qz9_A 249 VPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAH 328 (416)
T ss_dssp SCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred cCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 6543211000 00000000000 00122446888888888899998776678899999999999999999986
Q ss_pred CCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecc-cCCHHHHHHHHHHHHHHHH
Q 015729 293 GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG-HLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 293 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~-~~~~~di~~~~~~i~~~l~ 371 (401)
|+++..+........++++.++ +..++.+.|.++ ||.+... .++++||++.. .++++|+++++++|+++++
T Consensus 329 g~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~l~~~-gi~~~~~----~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~ 400 (416)
T 1qz9_A 329 ELTLVTPREHAKRGSHVSFEHP---EGYAVIQALIDR-GVIGDYR----EPRIMRFGFTPLYTTFTEVWDAVQILGEILD 400 (416)
T ss_dssp CCEECSCSSGGGBCSEEEEECT---THHHHHHHHHTT-TEECEEE----TTTEEEEECCTTTCCHHHHHHHHHHHHHHHH
T ss_pred CeEEeCCCCHHHcCCEEEEecC---CHHHHHHHHHhC-CcEeccC----CCCeEEEeCcccCCCHHHHHHHHHHHHHHHh
Confidence 7877654321112346788875 367899999866 9886421 35689998863 7899999999999999998
Q ss_pred hcCC
Q 015729 372 DVGY 375 (401)
Q Consensus 372 ~~~~ 375 (401)
+..+
T Consensus 401 ~~~~ 404 (416)
T 1qz9_A 401 RKTW 404 (416)
T ss_dssp HTTT
T ss_pred cccc
Confidence 7653
No 34
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=100.00 E-value=1.1e-33 Score=265.74 Aligned_cols=336 Identities=14% Similarity=0.146 Sum_probs=251.8
Q ss_pred CcccccCCCcCChHHHHHHHccCcCC------------CCCccHHHHHHHHHHHHHHHhcCCCCceEEecCCh-hHHHHH
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNED------------YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTG-TGAWES 75 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~------------~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~-t~a~~~ 75 (401)
+.|++.+||.++++.+++++.+.... ++.+...+...++++.+++++|.+.++.+++++|+ |+|+..
T Consensus 3 ~~~~~~~g~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~~ 82 (360)
T 1w23_A 3 QVFNFNAGPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFTM 82 (360)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHH
T ss_pred ceEeecCCCcCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchHHHHH
Confidence 57899999999999999999886532 12344566788999999999999755569999998 999999
Q ss_pred HHhccCCCCC---eEEEEcCCcchHHHHHHHHHcCCcEEEEeCCC-CCCCChHHHHH-HHhccCCCCceEEEEEecCCCc
Q 015729 76 ALTNTLSPGD---RIISFLIGQFSLLWIDQQQRLNFNVDVVESDW-GEGAKLDVLAS-KLAADTAHTIKAICIVHNETAT 150 (401)
Q Consensus 76 ~~~~~~~~gd---~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~le~-~~~~~~~~~~~~i~~~~~~n~t 150 (401)
++.+++.+|+ .|+++.++ +.....++..| +++.++.++ ++.+|++++++ +++ ++++++++++++|||
T Consensus 83 ~~~~l~~~~~~g~~vi~~~~~---~~~~~~~~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~----~~~k~v~~~~~~npt 154 (360)
T 1w23_A 83 LPMNLLTKGTIGNYVLTGSWS---EKALKEAKLLG-ETHIAASTKANSYQSIPDFSEFQLN----ENDAYLHITSNNTIY 154 (360)
T ss_dssp HHHHHCCTTCEEEEEECSHHH---HHHHHHHHTTS-EEEEEEECGGGTSCSCCCGGGCCCC----TTEEEEEEESEETTT
T ss_pred HHHHhcCCCCcccEEEecchh---HHHHHHHHHhC-CeEEeecccccCcCCccchHhhccC----CCCCEEEEeCCCCCc
Confidence 9888876644 44444333 33224467789 999999875 44578889888 764 468999999999999
Q ss_pred ccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCcc
Q 015729 151 GVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRV 230 (401)
Q Consensus 151 G~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~ 230 (401)
|.+.+ +++++ +|+++|+|++|+.+..+.+... .|++++|+||++ ++.|+|+++++++.++++.... ..
T Consensus 155 G~~~~-----~i~~~--~~~~li~D~a~~~~~~~~~~~~--~di~~~s~sK~~-~~~G~G~~~~~~~~~~~~~~~~--~~ 222 (360)
T 1w23_A 155 GTQYQ-----NFPEI--NHAPLIADMSSDILSRPLKVNQ--FGMIYAGAQKNL-GPSGVTVVIVKKDLLNTKVEQV--PT 222 (360)
T ss_dssp TEECS-----SCCCC--CSSCEEEECTTTTTSSCCCGGG--CSEEEEETTTTT-SCTTCEEEEEEHHHHCSCCTTC--CG
T ss_pred ceecc-----ccccc--CCceEEEechhhcCCCCcCccc--CCEEEEEccccc-CCCCcEEEEEcHHHHhhcccCC--cc
Confidence 99987 34446 9999999999998877666554 389999999988 4778999999999877665432 12
Q ss_pred ccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHcC-C-ccccCCCccCCce
Q 015729 231 FFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAWG-L-KNCTQKEEWFSDT 307 (401)
Q Consensus 231 ~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~g-~-~~~~~~~~~~~~~ 307 (401)
+.++..... .+ +..++++...++++.++++.+.+. ++++..++++++++++.+.|++++ + ..... +...++.
T Consensus 223 ~~~~~~~~~---~~-~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~ 297 (360)
T 1w23_A 223 MLQYATHIK---SD-SLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAE-KGSRSLM 297 (360)
T ss_dssp GGCHHHHHH---TT-TCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSC-GGGBCSS
T ss_pred hhhhhhhhh---cc-CCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCC-chhccCc
Confidence 222221110 11 234568888888888999887766 588899999999999999999874 4 33211 1123455
Q ss_pred eEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 308 VTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 308 ~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
++++.+|+..+..++.+.|.++ ||.+.++... .+++||++....+++|+++++++|++++++
T Consensus 298 ~~~~~~~~~~~~~~~~~~l~~~-gi~~~~~~~~--~~~iRis~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 298 NVTFNLRNEELNQQFLAKAKEQ-GFVGLNGHRS--VGGCRASIYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp EEEEECSSHHHHHHHHHHHHHT-TEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCccHHHHHHHHHHC-CeeeecCCCC--CCeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence 8888886533456788888655 9999877542 568999998888999999999999998764
No 35
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=3.4e-33 Score=265.50 Aligned_cols=330 Identities=13% Similarity=0.051 Sum_probs=252.2
Q ss_pred cccCCCcCChHHHHHHHccCcCCCC-----CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCC---
Q 015729 12 LFVPGPVHIPDQVIRAMNRNNEDYR-----SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSP--- 83 (401)
Q Consensus 12 ~~~~~p~~~~~~v~~a~~~~~~~~~-----~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~--- 83 (401)
.++.++.++++++++++.+...... .+...+...++++.+++++|.++. ++++++|+++|+..++.++..+
T Consensus 34 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-~i~~~~ggt~a~~~~~~~~~~~~~~ 112 (397)
T 3f9t_A 34 IFGSMCSNVLPITRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGSLLNNKDA-YGHIVSGGTEANLMALRCIKNIWRE 112 (397)
T ss_dssp BCSCSCCCCCTHHHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHHHTTCTTC-EEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecCCCcHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCC-CEEEecCcHHHHHHHHHHHHHHHHh
Confidence 3444566677888888877543211 123456778999999999998764 4899999999999998776654
Q ss_pred ----------CCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccc
Q 015729 84 ----------GDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVT 153 (401)
Q Consensus 84 ----------gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~ 153 (401)
||+|+++.++|++.. ..++..|++++.++.+.++.+|++++++++++ .+++++++++++||||.+
T Consensus 113 ~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~v~~~~~~nptG~~ 187 (397)
T 3f9t_A 113 KRRKGLSKNEHPKIIVPITAHFSFE--KGREMMDLEYIYAPIKEDYTIDEKFVKDAVED---YDVDGIIGIAGTTELGTI 187 (397)
T ss_dssp HHHTTCCCCSSCEEEEETTCCTHHH--HHHHHHTCEEEEECBCTTSSBCHHHHHHHHHH---SCCCEEEEEBSCTTTCCB
T ss_pred hhhhcccCCCCeEEEECCcchhHHH--HHHHHcCceeEEEeeCCCCcCCHHHHHHHHhh---cCCeEEEEECCCCCCCCC
Confidence 999999999988754 55677899999999998888999999999985 156899999999999999
Q ss_pred cchHHHHHHhhhcCCCcEEEEecccccCcc--------------eeccCcccceEEEecCCCcccCCCcceEEEecHHH-
Q 015729 154 NNLSKVRKLLDEYRHPALFLVDGVSSICAI--------------DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKA- 218 (401)
Q Consensus 154 ~~l~~i~~l~~~~~~~~~li~D~a~~~~~~--------------~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~- 218 (401)
.|+++|.++|++ +|+++|+|++|+.+.. +++... ++|++++|.||+++++.++|+++++++.
T Consensus 188 ~~l~~i~~l~~~--~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~~~~~~g~~~~~~~~~ 264 (397)
T 3f9t_A 188 DNIEELSKIAKE--NNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGHCPIPSGGILFKDIGY 264 (397)
T ss_dssp CCHHHHHHHHHH--HTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTCCCSSCEEEEESSGGG
T ss_pred CCHHHHHHHHHH--hCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccccCCCCCceEEEEeCHHH
Confidence 999999999999 9999999999986543 334445 7899999999999777788998887664
Q ss_pred HHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCcccc
Q 015729 219 LEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCT 298 (401)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 298 (401)
.+.+..... .... .....+.++.+.....++.++++.+...++++..++..++++++.+.|+++|+++..
T Consensus 265 ~~~~~~~~~-~~~~---------~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 334 (397)
T 3f9t_A 265 KRYLDVDAP-YLTE---------TRQATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKENNFKPVI 334 (397)
T ss_dssp GGGTCEECT-TSSS---------SEECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBSS
T ss_pred HHhhccCCc-cccC---------CCccccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEc
Confidence 333321110 0000 000011233444466778888887777778889999999999999999998877654
Q ss_pred CCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 299 QKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
+. ...++++.++ +..++.+.|.++ ||.+.++.. ++++||++...++++|+++++++|+++++
T Consensus 335 ~~----~~~~~~~~~~---~~~~~~~~l~~~-gi~v~~~~~---~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 335 EP----ILNIVAIEDE---DYKEVCKKLRDR-GIYVSVCNC---VKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp CC----SSSEEEEECT---THHHHHHHHHHT-TCBCEECSS---SSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred CC----CccEEEEEeC---CHHHHHHHHHhC-CeEEeccCC---CCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 31 2346667764 367899999877 999887754 47999998888899999999999998764
No 36
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=1.7e-32 Score=257.09 Aligned_cols=317 Identities=10% Similarity=-0.003 Sum_probs=248.4
Q ss_pred CCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcc
Q 015729 16 GPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQF 95 (401)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~ 95 (401)
.|.+.++.+++++.+.......+ ......++++.+++++|.++. ++++++|+++|+..++.+++++||+|+++.++|+
T Consensus 26 ~~~~~~~~v~~a~~~~~~~~~~y-~~~~~~~l~~~la~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~ 103 (354)
T 3ly1_A 26 NPLGMSPKAQAAARDAVVKANRY-AKNEILMLGNKLAAHHQVEAP-SILLTAGSSEGIRAAIEAYASLEAQLVIPELTYG 103 (354)
T ss_dssp CSSCCCHHHHHHHHHTGGGTTSC-CHHHHHHHHHHHHHHTTSCGG-GEEEESHHHHHHHHHHHHHCCTTCEEEEESSSCT
T ss_pred CCCCCCHHHHHHHHHHHhhCcCC-CCCchHHHHHHHHHHhCCChH-HEEEeCChHHHHHHHHHHHhCCCCeEEECCCCch
Confidence 45668899999998866543333 345778999999999998654 4999999999999999998999999999999888
Q ss_pred hHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEe
Q 015729 96 SLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVD 175 (401)
Q Consensus 96 ~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D 175 (401)
+.. ..++..|++++.++.+.++.+|++++++++++. ++++++++++++||||.+.|.+++.++++..++|+++|+|
T Consensus 104 ~~~--~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~--~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~D 179 (354)
T 3ly1_A 104 DGE--HFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAY--SGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVD 179 (354)
T ss_dssp HHH--HHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTC--SSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEE
T ss_pred HHH--HHHHHcCCEEEEecCCCCCCCCHHHHHHHhccC--CCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEe
Confidence 764 567788999999999888889999999999841 2579999999999999999988877777664489999999
Q ss_pred cccccCccee------c-cCcc-cceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCC
Q 015729 176 GVSSICAIDF------R-MDEW-GIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTF 246 (401)
Q Consensus 176 ~a~~~~~~~~------~-~~~~-~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 246 (401)
++|+.+...- . .... +.++++.|.||+++ ++.++|++++++++.+.+.....
T Consensus 180 e~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~------------------- 240 (354)
T 3ly1_A 180 EAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRYVA------------------- 240 (354)
T ss_dssp CTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHHHHHHGGGTT-------------------
T ss_pred ccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCHHHHHHHHHhcC-------------------
Confidence 9988543211 0 1122 56799999999995 34457999999998887764321
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHH
Q 015729 247 WPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRA 326 (401)
Q Consensus 247 ~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 326 (401)
.++++...++++.++++.. ..+++.++++.++++++.+.|++.|+.+..+ .+.++++.++. +..++.+.|
T Consensus 241 -~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-----~~~~~~~~~~~--~~~~~~~~l 310 (354)
T 3ly1_A 241 -GEKINFSGVDAALASMNDS--AFITYSKKSNDVSRQILLKALEDLKLPYLPS-----EGNFVFHQLVV--PLKDYQTHM 310 (354)
T ss_dssp -CSCCCHHHHHHHHHHTTCH--HHHHHHHHHHHHHHHHHHHHHHHHTCCBCCC-----CSSEEEEECSS--CHHHHHHHH
T ss_pred -CCCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHHCCCeECCC-----CceEEEEECCC--CHHHHHHHH
Confidence 1346676666666666632 3467888999999999999999888776542 23467888864 678999999
Q ss_pred HhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 327 WQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 327 ~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.++ ||.+. +..+..++++||++. +++|+++++++|++++++
T Consensus 311 ~~~-gi~v~-g~~~~~~~~iRis~~---~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 311 ADA-GVLIG-RAFPPADNWCRISLG---TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp HHT-TEECC-CCCTTCTTEEEEECC---CHHHHHHHHHHHHHHHHT
T ss_pred HHC-CEEEe-ecCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHHh
Confidence 865 99998 654445778999854 799999999999999875
No 37
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=4.1e-32 Score=255.46 Aligned_cols=313 Identities=9% Similarity=0.019 Sum_probs=244.6
Q ss_pred CCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcc
Q 015729 16 GPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQF 95 (401)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~ 95 (401)
.|.++++.+++++.+.......+ ......++++.+++++|.++. ++++++|+++|++.++.+++++||+|+++.++|+
T Consensus 42 ~~~~~~~~v~~a~~~~~~~~~~y-~~~~~~~lr~~la~~~~~~~~-~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~ 119 (363)
T 3ffh_A 42 NPLGTSKKVAAIQANSSVETEIY-PDGWASSLRKEVADFYQLEEE-ELIFTAGVDELIELLTRVLLDTTTNTVMATPTFV 119 (363)
T ss_dssp CTTCCCHHHHHHHHTCBSCCCBC-----CHHHHHHHHHHHTCCGG-GEEEESSHHHHHHHHHHHHCSTTCEEEEEESSCH
T ss_pred CCCCCCHHHHHHHHHHHHHhhcC-CCcchHHHHHHHHHHhCCChh-hEEEeCCHHHHHHHHHHHHccCCCEEEEcCCChH
Confidence 35668899999999865433222 345678999999999998654 4999999999999999999999999999999877
Q ss_pred hHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEe
Q 015729 96 SLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVD 175 (401)
Q Consensus 96 ~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D 175 (401)
+.. ..++..|++++.++.++++.+|++++++++++ +++++++++++||||.+.|++++.++++.++.|+++|+|
T Consensus 120 ~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~D 193 (363)
T 3ffh_A 120 QYR--QNALIEGAEVREIPLLQDGEHDLEGMLNAIDE----KTTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLD 193 (363)
T ss_dssp HHH--HHHHHHTCEEEEEECCTTSCCCHHHHHHHCCT----TEEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEE
T ss_pred HHH--HHHHHcCCEEEEecCCCCCCcCHHHHHHhccc----CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEe
Confidence 653 56777899999999988888999999999873 679999999999999999999999999992229999999
Q ss_pred cccccCcc-----eec-cCcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCC
Q 015729 176 GVSSICAI-----DFR-MDEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWP 248 (401)
Q Consensus 176 ~a~~~~~~-----~~~-~~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 248 (401)
++|+.+.. ... ....+.++++.|.+|+++ ++.++|++++++++.+.+..... .
T Consensus 194 e~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~--------------------~ 253 (363)
T 3ffh_A 194 EAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEIIRQLNIVRP--------------------P 253 (363)
T ss_dssp CTTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECHHHHHHHHHTCC--------------------S
T ss_pred CchHhhcCccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCHHHHHHHHHhCC--------------------C
Confidence 99984332 111 112345688899999984 23345999999998887765321 2
Q ss_pred CCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH-cCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHH
Q 015729 249 YTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEA-WGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAW 327 (401)
Q Consensus 249 ~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 327 (401)
++++...++++.++++. ..++++.++++.++++++.+.|++ .|+++..+ .+.++++.++. +..++.+.|.
T Consensus 254 ~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-----~~~~~~~~~~~--~~~~~~~~l~ 324 (363)
T 3ffh_A 254 FNTTSIGQKLAIEAIKD--QAFIGECRTSNANGIKQYEAFAKRFEKVKLYPA-----NGNFVLIDLGI--EAGTIFSYLE 324 (363)
T ss_dssp CCCBHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCC-----CSSEEEEECSS--CHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHhhCCCceECCC-----CCeEEEEECCC--CHHHHHHHHH
Confidence 34677666777777763 234678889999999999999999 68877543 23467888864 6889999998
Q ss_pred hhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 328 QRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 328 ~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
++ ||.+.+|.....++++||++. +++|+++++++|+++
T Consensus 325 ~~-gi~v~~g~~~~~~~~iRis~~---~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 325 KN-GYITRSGAALGFPTAVRITIG---KEEDNSAVIALLEKL 362 (363)
T ss_dssp HT-TEECEETTTTTCTTEEEEECC---CHHHHHHHHHHHHHH
T ss_pred HC-CeEEEeCccCCCCCeEEEECC---CHHHHHHHHHHHHHh
Confidence 76 999999866545789999864 899999999999875
No 38
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=1.1e-32 Score=262.58 Aligned_cols=300 Identities=16% Similarity=0.156 Sum_probs=235.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCC
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGE 119 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 119 (401)
..+...++++.+++++|.+. .+++++|++|+..++.+++++||.|++..+.|++.. ..++..|++++.++.
T Consensus 86 ~~~~~~~l~~~la~~~~~~~---~i~~~sGt~a~~~~l~~~~~~gd~v~~~~~~~~~~~--~~~~~~g~~~~~~~~---- 156 (399)
T 3tqx_A 86 TQTIHKELEKDISEFLGTDD---TILYSSCFDANGGLFETLLGPEDAIISDELNHASII--DGIRLCKAQRYRYKN---- 156 (399)
T ss_dssp CBHHHHHHHHHHHHHHTCSE---EEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHH--HHHHSCCSEEEEECT----
T ss_pred CchHHHHHHHHHHHHHCCCc---EEEECchHHHHHHHHHHhcCCCCEEEECCcccHHHH--HHHHHcCCceeEeCC----
Confidence 45678899999999999763 455556789999988889999999999999877654 457778999988885
Q ss_pred CCChHHHHHHHhccCC--CCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCccee------ccCc--
Q 015729 120 GAKLDVLASKLAADTA--HTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDF------RMDE-- 189 (401)
Q Consensus 120 ~~d~~~le~~~~~~~~--~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~------~~~~-- 189 (401)
.|++++++.+++... .+++++++++++||||.+.|+++|.++|++ +|+++|+|++|+.+.... +...
T Consensus 157 -~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 233 (399)
T 3tqx_A 157 -NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADK--YNALVMVDDSHAVGFIGENGRGTPEYCGVA 233 (399)
T ss_dssp -TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHH--TTCEEEEECTTTTTTSSTTSCCHHHHHTCT
T ss_pred -CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHH--cCCEEEEECCccccccCCCCCchHHhhCCC
Confidence 378899998876321 167999999999999999999999999999 999999999997553221 1111
Q ss_pred ccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHh
Q 015729 190 WGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE 269 (401)
Q Consensus 190 ~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~ 269 (401)
.++|++++|.||+++|++| |+++.+++..+.+.... ..+ .+.++.+...++++.++++... .
T Consensus 234 ~~~di~~~s~sK~~~g~~g-G~~~~~~~~~~~~~~~~------------~~~----~~~~~~~~~~~~~~~~~l~~~~-~ 295 (399)
T 3tqx_A 234 DRVDILTGTLGKALGGASG-GYTSGHKEIIEWLRNRS------------RPY----LFSNTVAPVIVATSLKVLELLK-T 295 (399)
T ss_dssp TCCSEEEEESSSSSCSSCC-EEEEECHHHHHHHHHHC------------HHH----HSSCCCCHHHHHHHHHHHHHHH-H
T ss_pred CCCcEEEecchHhcccCce-EEEEcCHHHHHHHHHhC------------cce----eccCCCcHHHHHHHHHHHHHHh-h
Confidence 2579999999999976776 99999999877765421 000 1123577777777888888764 4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC---CCCcEE
Q 015729 270 GLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK---VAGKVF 346 (401)
Q Consensus 270 g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~---~~~~~~ 346 (401)
+.++.++++.++++++.+.|+++|+++..+ .+.++++.+++..+..++.+.|.++ ||.+.++..+ ...+++
T Consensus 296 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~~~~~~~~~~~~~i 369 (399)
T 3tqx_A 296 EGPQLRKQLQENSRYFRAGMEKLGFQLVPG-----NHPIIPVMLGDAQLATNMADHLLQE-GIYVVGFSYPVVPMGKARI 369 (399)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHTCCBCCC-----SSSEEEEEEECHHHHHHHHHHHHHT-TEECCEECTTTSCTTCEEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHcCCCcCCC-----CCCEEEEEeCCHHHHHHHHHHHHHC-CCEEeeeCCCCCCCCCceE
Confidence 578899999999999999999988877632 2346777776554677899999876 9999876442 234689
Q ss_pred EEeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 347 RIGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 347 Ri~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
||++...++++|+++++++|++++++++.
T Consensus 370 Ri~~~~~~~~~~i~~~~~~l~~~~~~~~~ 398 (399)
T 3tqx_A 370 RVQMSAVHTQQQLDRAIEAFGQVGKKLGA 398 (399)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEeecCCCHHHHHHHHHHHHHHHHHhcC
Confidence 99988788999999999999999998764
No 39
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.1e-32 Score=259.50 Aligned_cols=313 Identities=13% Similarity=0.099 Sum_probs=242.2
Q ss_pred CCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcc
Q 015729 16 GPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQF 95 (401)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~ 95 (401)
.|.+.++.+++++.+.......+.... ..++++.+++++|.+.. ++++++|+++|+..++.+++++||+|+++.++|+
T Consensus 40 ~~~~~~~~v~~a~~~~~~~~~~y~~~~-~~~lr~~la~~~~~~~~-~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~ 117 (365)
T 3get_A 40 NPFGTPPKAIECLRQNANKAHLYPDDS-MIELKSTLAQKYKVQNE-NIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFA 117 (365)
T ss_dssp CTTCSCHHHHHHHHHHGGGTTSCCCTT-CHHHHHHHHHHHTCCGG-GEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCT
T ss_pred CCCCCCHHHHHHHHHHHHhhccCCCCC-hHHHHHHHHHHhCCCcc-eEEECCCHHHHHHHHHHHHhCCCCEEEEeCCChH
Confidence 456678999999887543322222112 25899999999998654 4999999999999999999999999999999887
Q ss_pred hHHHHHHHHHcCCcEEEEeC-CCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEE
Q 015729 96 SLLWIDQQQRLNFNVDVVES-DWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLV 174 (401)
Q Consensus 96 ~~~~~~~~~~~g~~~~~v~~-~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~ 174 (401)
+.. ..++..|++++.++. +.++ +|+++++++++ ++++++++++++||||.+.|++++.++++...+|+++|+
T Consensus 118 ~~~--~~~~~~g~~~~~v~~~~~~~-~d~~~l~~~l~----~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~ 190 (365)
T 3get_A 118 MYE--IYAKQCGAKCYKTQSITHNL-DEFKKLYETHK----DEIKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVI 190 (365)
T ss_dssp HHH--HHHHHHTCEEEECSSSSCCH-HHHHHHHHHTT----TTEEEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEE
T ss_pred HHH--HHHHHcCCEEEEEecCCCCC-CCHHHHHHHhC----CCCCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEE
Confidence 654 567778999999998 6667 89999999987 467999999999999999999999998884337999999
Q ss_pred ecccccCc------ceecc----CcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhc
Q 015729 175 DGVSSICA------IDFRM----DEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNL 243 (401)
Q Consensus 175 D~a~~~~~------~~~~~----~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (401)
|++|+.+. .+.+. ...+.++++.|.||+++ ++.++|++++++++.+.+.....
T Consensus 191 De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~---------------- 254 (365)
T 3get_A 191 DAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANANIISAFYKLRA---------------- 254 (365)
T ss_dssp ECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECHHHHHHHHHHSC----------------
T ss_pred eCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCHHHHHHHHHhcC----------------
Confidence 99988332 11111 22356799999999984 34457999999998777654211
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHH
Q 015729 244 GTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIV 323 (401)
Q Consensus 244 g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 323 (401)
.++++...++++.++++. ..++++.++++.++++++.+.|++.|+++..+ .+.++++.++.. +..++.
T Consensus 255 ----~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-----~~~~~~~~~~~~-~~~~~~ 322 (365)
T 3get_A 255 ----PFNVSNLALKAAVAAMDD--DEFTEKTLENNFSQMELYKEFAKKHNIKIIDS-----YTNFITYFFDEK-NSTDLS 322 (365)
T ss_dssp ----TTCSCHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHHHHHHTTCEECCC-----SSSEEEEECSSS-CHHHHH
T ss_pred ----CCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhCCCEECCC-----CCeEEEEECCCC-CHHHHH
Confidence 224666666666666663 23477889999999999999999988776543 224578888765 788999
Q ss_pred HHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 324 RRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 324 ~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
+.|.++ ||.+.+|..+. ++++|+++. +++|+++++++|++++
T Consensus 323 ~~l~~~-gi~v~~g~~~~-~~~iRis~~---~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 323 EKLLKK-GIIIRNLKSYG-LNAIRITIG---TSYENEKFFTEFDKIL 364 (365)
T ss_dssp HHHHTT-TEECEECGGGT-CSEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred HHHHHC-CEEEEECccCC-CCEEEEEcC---CHHHHHHHHHHHHHHh
Confidence 999876 99999886554 689999864 8999999999998876
No 40
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=2.6e-32 Score=259.25 Aligned_cols=323 Identities=14% Similarity=0.100 Sum_probs=239.4
Q ss_pred CChHHHHHHHccCcCC-CCCccHHHHHHHHHHHHHHHh----cCC-CCce-EEecCChhHHHHHHHhccCCCCCeEEEEc
Q 015729 19 HIPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIF----KTT-SGTP-FLIPTTGTGAWESALTNTLSPGDRIISFL 91 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~----g~~-~~~~-i~~~~g~t~a~~~~~~~~~~~gd~vl~~~ 91 (401)
+.++.+.+++.+.... ...+.......++++.+++++ |.+ .+++ +++++|+++|+..++.+++++||+|+++.
T Consensus 39 ~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~ 118 (389)
T 1gd9_A 39 DTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPT 118 (389)
T ss_dssp CCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEE
T ss_pred CCCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcC
Confidence 3567777777664321 111221223456677777766 753 3456 99999999999999999899999999999
Q ss_pred CCcchHHHHHHHHHcCCcEEEEeCCC--CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhc
Q 015729 92 IGQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEY 166 (401)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~ 166 (401)
++|++.. ..++..|++++.++.+. ++.+|++++++++++ +++++++++++||||.+++ +++|.++|++
T Consensus 119 ~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~----~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~- 191 (389)
T 1gd9_A 119 PAFVSYA--PAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTD----KTRALIINSPCNPTGAVLTKKDLEEIADFVVE- 191 (389)
T ss_dssp SCCTTHH--HHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCT----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH-
T ss_pred CCchhHH--HHHHHCCCEEEEeccCCccCCCCCHHHHHHhcCc----CceEEEEECCCCCCCcCCCHHHHHHHHHHHHH-
Confidence 9988865 45677899999999875 346899999999874 5789999999999999985 8889999999
Q ss_pred CCCcEEEEecccccCcc----eeccCc----ccceEEEecCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHH
Q 015729 167 RHPALFLVDGVSSICAI----DFRMDE----WGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKD 236 (401)
Q Consensus 167 ~~~~~li~D~a~~~~~~----~~~~~~----~~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 236 (401)
+|+++|+|++|+.+.. ..+... .+.|+++.|.||+++ ++| +|++++++++.+.+....
T Consensus 192 -~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~l~~~~---------- 259 (389)
T 1gd9_A 192 -HDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFA-MTGWRLGFVAAPSWIIERMVKFQ---------- 259 (389)
T ss_dssp -TTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTT-CGGGCCEEEECCHHHHHHHHHHH----------
T ss_pred -cCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcC-CcccceEEEEECHHHHHHHHHHH----------
Confidence 9999999999986643 112221 467999999999984 445 699999998877665321
Q ss_pred HHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCC
Q 015729 237 YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS 315 (401)
Q Consensus 237 ~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 315 (401)
.+ +.++.+...++++.++++..... ++++.+++++++++++.+.|+++|+++..+ ..+.++++.++.
T Consensus 260 ------~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~~~~~~~~~~~ 327 (389)
T 1gd9_A 260 ------MY--NATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKP----KGAFYIFPRIRD 327 (389)
T ss_dssp ------TT--TTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCC----CBTTEECCBCGG
T ss_pred ------hh--hccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHcCCeecCC----CeeeEEEEeccC
Confidence 01 12345666666666666643321 467788889999999999999888776543 234566677754
Q ss_pred -CCCHHHHHHHHHhhCCeEEccCCCCC--CCcEEEEeecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 316 -HINSSEIVRRAWQRYNLSLGLGLNKV--AGKVFRIGHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 316 -~~~~~~l~~~L~~~~~i~v~~g~~~~--~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
+.+..++.+.|.+++||.+.+|..+. .++++||++.. +++++++++++|++++++..
T Consensus 328 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~--~~~~i~~~l~~l~~~~~~~~ 387 (389)
T 1gd9_A 328 TGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT--AYEKLEEAMDRMERVLKERK 387 (389)
T ss_dssp GTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS--CHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHhcc
Confidence 56788999999845599999885432 35689998765 89999999999999987653
No 41
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=100.00 E-value=1.8e-32 Score=264.03 Aligned_cols=347 Identities=13% Similarity=0.102 Sum_probs=244.0
Q ss_pred CCCCCCCcccccCCCcCChHHHHHHHccCcCCC-----CCc----cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHH
Q 015729 3 YMYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDY-----RSP----AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAW 73 (401)
Q Consensus 3 ~~~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~-----~~~----~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~ 73 (401)
|+...+..||+.+++.+.++.+++++.+..... ..+ ...+...++++.+++++|.++. ++++++|+++|+
T Consensus 13 ~~~~~~~~~Ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~~g~t~a~ 91 (432)
T 3a9z_A 13 ESPPNRKVYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQ-DIIFTSGGTESN 91 (432)
T ss_dssp -----CCEECBTTTCCCCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGG-GEEEESCHHHHH
T ss_pred cCCCCCcEEeeCCccCCCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcC-eEEEeCChHHHH
Confidence 445567899999998899999999988743211 111 1335678999999999998644 499999999999
Q ss_pred HHHHhccC--------CCCCeEEEEcCCcc-------------hHH--HHHHHHHcCCcEEEEeCCC-CCCCChHHHHHH
Q 015729 74 ESALTNTL--------SPGDRIISFLIGQF-------------SLL--WIDQQQRLNFNVDVVESDW-GEGAKLDVLASK 129 (401)
Q Consensus 74 ~~~~~~~~--------~~gd~vl~~~~~~~-------------~~~--~~~~~~~~g~~~~~v~~~~-~~~~d~~~le~~ 129 (401)
..++.++. ++||+|+++.|+|+ +.. +..+++..|++++.++.+. ++.+|+++++++
T Consensus 92 ~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~ 171 (432)
T 3a9z_A 92 NLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAA 171 (432)
T ss_dssp HHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHT
T ss_pred HHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHh
Confidence 99887765 48876666665543 332 3345566799999999876 667899999998
Q ss_pred HhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCC----------cEEEEecccccCcceeccCcccceEEEecC
Q 015729 130 LAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHP----------ALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (401)
Q Consensus 130 ~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~----------~~li~D~a~~~~~~~~~~~~~~~di~~~s~ 199 (401)
+++ +++++++++++||||.+.|+++|.++|++ +| +++|+|++|+.+..+++....++|++++|+
T Consensus 172 i~~----~~~~v~~~~~~nptG~~~~~~~i~~l~~~--~~~~~~~~~~~~~~livDea~~~~~~~~~~~~~~~d~~~~s~ 245 (432)
T 3a9z_A 172 VRP----TTCLVTIMLANNETGVIMPISEISRRIKA--LNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVG 245 (432)
T ss_dssp CCT----TEEEEECCSBCTTTCBBCCHHHHHHHHHH--HHHHHHHHTCCCCEEEEECTTTTTTSCCCHHHHCCSEEEEEG
T ss_pred ccC----CceEEEEECcccCcccccCHHHHHHHHHh--cCcccccccCCceEEEEEchhhhCCcccChhhcCCCEEEEeh
Confidence 863 57999999999999999999999999999 77 999999999988766665556789999999
Q ss_pred CCcccCCCcceEEEecHHH-HHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHH
Q 015729 200 QKALSLPTGMGIVCASPKA-LEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERH 278 (401)
Q Consensus 200 ~K~l~g~~g~G~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~ 278 (401)
||++ |+. +|+++++++. ...+.+....... ... +..++++...++++.++++.+.+ ++++..+++
T Consensus 246 ~K~~-g~~-~G~~~~~~~~~~~~~~~~~~~~~~------~~~-----~~~~~~~~~~~~a~~aal~~~~~-~~~~~~~~~ 311 (432)
T 3a9z_A 246 HKFY-GPR-IGALYVRGVGKLTPLYPMLFGGGQ------ERN-----FRPGTENTPMIAGLGKAADLVSE-NCETYEAHM 311 (432)
T ss_dssp GGTT-CCS-CEEEEETTBTTTBCCCCSCCSSCG------GGG-----TSCSCCCHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred hHhc-CCc-ceEEEEccccccCCcCceeecCCc------ccc-----ccCCCcCHHHHHHHHHHHHHHHh-hHHHHHHHH
Confidence 9987 565 8999998765 2222211100000 011 22446788888888888887655 678899999
Q ss_pred HHHHHHHHHHHHHc-CCccc--cCC-CccCCceeEEEEcCC-CCCHHHHHHHHHhhCCeEEccCCCCC------------
Q 015729 279 RRLGKATRLAVEAW-GLKNC--TQK-EEWFSDTVTAVIVPS-HINSSEIVRRAWQRYNLSLGLGLNKV------------ 341 (401)
Q Consensus 279 ~~~~~~l~~~L~~~-g~~~~--~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~~~i~v~~g~~~~------------ 341 (401)
.++++++.+.|+++ |+.+. .+. +....+.+++|.+++ +.+..++.+.+. ++.+..|..+.
T Consensus 312 ~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~i~~~~G~~~~~~~~~~~~~~l~ 388 (432)
T 3a9z_A 312 RDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQCQ---TLLASVGASCHSDHEDRPSPVLL 388 (432)
T ss_dssp HHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHCS---SEECBSSCGGGGGGTTSCCHHHH
T ss_pred HHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHhc---CeEEeccccccCCCCCCccHHHH
Confidence 99999999999985 76543 210 112344567777754 345556655542 66666552211
Q ss_pred --------CCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 342 --------AGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 342 --------~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.++++||++...+|++|+++++++|+++++++
T Consensus 389 ~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~ 428 (432)
T 3a9z_A 389 SCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQL 428 (432)
T ss_dssp HTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHh
Confidence 13689999988889999999999999998754
No 42
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=4.9e-32 Score=255.31 Aligned_cols=313 Identities=14% Similarity=0.149 Sum_probs=240.0
Q ss_pred CcCChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCc
Q 015729 17 PVHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQ 94 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~ 94 (401)
|.+.++.+++++.+.... ...+.. ....++++.+++++|.+.++.+++++|+++|++.++.+++++||+|++..++|
T Consensus 41 ~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~ 119 (367)
T 3euc_A 41 PYRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPGF 119 (367)
T ss_dssp CCCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHHTCCTTCEEEEEEHHHHHHHHHHHHTCCTTCEEEEEESCS
T ss_pred CCCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHhCCCCcceEEEcCCHHHHHHHHHHHHcCCCCEEEEcCCCH
Confidence 556788888888774431 111111 24679999999999984445699999999999999999999999999999988
Q ss_pred chHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCC--C
Q 015729 95 FSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRH--P 169 (401)
Q Consensus 95 ~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~--~ 169 (401)
++.. ..++..|++++.++.+.++.+|++++++++++ ++++++++++++||||.+++ +++|.++|++ + |
T Consensus 120 ~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~---~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~--~~~~ 192 (367)
T 3euc_A 120 VMYA--MSAQFAGLEFVGVPLRADFTLDRGAMLAAMAE---HQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQG--SVCR 192 (367)
T ss_dssp CCSC--HHHHTTTCEEEEEECCTTSCCCHHHHHHHHHH---HCCSEEEEESSCTTTCCCCCHHHHHHHHHHTBT--TSCB
T ss_pred HHHH--HHHHHcCCeEEEecCCCCCCCCHHHHHHHhhc---cCCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhh--cCCC
Confidence 8764 45777899999999998888999999999985 25699999999999999975 5667777888 8 9
Q ss_pred cEEEEecccccCcc---eeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCC
Q 015729 170 ALFLVDGVSSICAI---DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTF 246 (401)
Q Consensus 170 ~~li~D~a~~~~~~---~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 246 (401)
+++|+|++|+.... .......+.++++.|.+|+..++.++|++++++++.+.+.....
T Consensus 193 ~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~~~~~~~------------------- 253 (367)
T 3euc_A 193 SLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKLGLAGIRLGYVAGDPQWLEQLDKVRP------------------- 253 (367)
T ss_dssp CEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCTTSCSCCEEEEEECHHHHHHHGGGCC-------------------
T ss_pred cEEEEeCcchhhcccchHHHHhhCCCEEEEecchhhcccccCceeeeeCHHHHHHHHHhCC-------------------
Confidence 99999999874321 11223445678999999983334457999999998887764311
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCCCHHHHHHH
Q 015729 247 WPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRR 325 (401)
Q Consensus 247 ~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 325 (401)
.++.+...++++.++++. ..++++.+++..++++++.+.|+++ |+.+... .+.++++.++ +..++.+.
T Consensus 254 -~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-----~~~~~~~~~~---~~~~l~~~ 322 (367)
T 3euc_A 254 -PYNVNVLTEATALFALEH--VAVLDEQAAQLRAERSRVAEGMAAHGGVTVFPS-----AANFLLARVP---DAAQTFDR 322 (367)
T ss_dssp -SSCCCHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHHHTSTTCEECCC-----SSSEEEEECS---CHHHHHHH
T ss_pred -CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCC-----CCeEEEEECC---CHHHHHHH
Confidence 234666666777777765 3346788899999999999999987 8875432 2346778885 67889999
Q ss_pred HHhhCCeEEccCCC--CCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 326 AWQRYNLSLGLGLN--KVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 326 L~~~~~i~v~~g~~--~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
|.++ ||.+.++.. ...++++||++. +++|+++++++|+++++
T Consensus 323 l~~~-gi~v~~~~~~~~~~~~~iRis~~---~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 323 LLAR-KVLIKNVSKMHPLLANCLRVTVS---TPEENAQFLEAFAASLQ 366 (367)
T ss_dssp HHTT-TEECEECGGGCGGGTTEEEEECC---CHHHHHHHHHHHHHHTC
T ss_pred HHHC-CeEEEECCccCCCCCCEEEEecC---CHHHHHHHHHHHHHHhc
Confidence 8765 999998754 234578999854 89999999999998763
No 43
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=6.7e-32 Score=257.18 Aligned_cols=318 Identities=14% Similarity=0.129 Sum_probs=242.9
Q ss_pred ChHHHHHHHccCcC----CCC----CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEc
Q 015729 20 IPDQVIRAMNRNNE----DYR----SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (401)
Q Consensus 20 ~~~~v~~a~~~~~~----~~~----~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~ 91 (401)
.++.+.+++.+... ... ..+..+...++++.+++++|.+ ++++++|+++|+..++.+++++||.|++..
T Consensus 58 ~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~---~v~~~~ggt~a~~~~~~~~~~~gd~V~~~~ 134 (398)
T 3a2b_A 58 TDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGKE---AAILFSTGFQSNLGPLSCLMGRNDYILLDE 134 (398)
T ss_dssp GCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHHHSSCTTCEEEEET
T ss_pred CCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHHhCCCCEEEECC
Confidence 56677776665321 111 1123477889999999999874 499999999999999999999999999999
Q ss_pred CCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcE
Q 015729 92 IGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPAL 171 (401)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ 171 (401)
++|.++. ..++..|++++.++. +|++++++.+++...++++++++++++||||.+.|+++|.++|++ +|++
T Consensus 135 p~~~~~~--~~~~~~g~~~~~v~~-----~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~~l~~~~~~--~~~~ 205 (398)
T 3a2b_A 135 RDHASII--DGSRLSFSKVIKYGH-----NNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLPELTSIANE--FDAA 205 (398)
T ss_dssp TCCHHHH--HHHHHSSSEEEEECT-----TCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCCHHHHHHHHHH--HTCE
T ss_pred ccCHHHH--HHHHHcCCceEEeCC-----CCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccCHHHHHHHHHH--cCcE
Confidence 9877664 456778999998886 489999999986321167999999999999999999999999999 9999
Q ss_pred EEEecccccCcce---ecc-C--c--ccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhc
Q 015729 172 FLVDGVSSICAID---FRM-D--E--WGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNL 243 (401)
Q Consensus 172 li~D~a~~~~~~~---~~~-~--~--~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (401)
+|+|++|+.+... ... . . .++|++++|.||+++ ++| |++++++++.+.+.... ..+.
T Consensus 206 li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~G-G~~~~~~~~~~~l~~~~------------~~~~- 270 (398)
T 3a2b_A 206 VMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLA-SLG-GFVAGDADVIDFLKHNA------------RSVM- 270 (398)
T ss_dssp EEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTC-SSC-EEEEECHHHHHHHHHHC------------HHHH-
T ss_pred EEEECCCcccccCCCCCchHhhcCCCcCCeEEEeccccccc-CCC-cEEEeCHHHHHHHHHhc------------ccce-
Confidence 9999999866421 111 1 1 136999999999985 777 99999998877665310 0011
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHH
Q 015729 244 GTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIV 323 (401)
Q Consensus 244 g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 323 (401)
..+++++..++++.++++... .+++.++++.++++++.+.|+++|+++..+ . +.++++.++++.+..++.
T Consensus 271 ---~~~~~~~~~~a~~~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~-g~~~~~~~~~~~~~~~l~ 340 (398)
T 3a2b_A 271 ---FSASMTPASVASTLKALEIIQ--NEPEHIEKLWKNTDYAKAQLLDHGFDLGAT----E-SPILPIFIRSNEKTFWVT 340 (398)
T ss_dssp ---SSBCCCHHHHHHHHHHHHHHH--HCTHHHHHHHHHHHHHHHHHHHTTCCBCSC----C-SSEEEEECCCHHHHHHHH
T ss_pred ---ecCCCCHHHHHHHHHHHHHHh--hCHHHHHHHHHHHHHHHHHHHhcCCCcCCC----C-CCEEEEEcCCHHHHHHHH
Confidence 122456655556667777643 246788899999999999999888776543 2 357788886555677899
Q ss_pred HHHHhhCCeEEccCCCCC---CCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 324 RRAWQRYNLSLGLGLNKV---AGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 324 ~~L~~~~~i~v~~g~~~~---~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
+.|.++ ||.+.++..+. ..+++||++...++++|+++++++|+++++++++
T Consensus 341 ~~l~~~-gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~~~ 394 (398)
T 3a2b_A 341 KMLQDD-GVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQAEV 394 (398)
T ss_dssp HHHHHT-TEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHC-CcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHhCc
Confidence 999877 99999885532 2468999988888999999999999999998876
No 44
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=100.00 E-value=1.2e-31 Score=257.77 Aligned_cols=301 Identities=16% Similarity=0.142 Sum_probs=234.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEG 120 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 120 (401)
.+...++++.+++++|.+ ..+++++|++|+..++.+++++||.|++..+.|.+.. ..++..|++++.++.
T Consensus 108 ~~~~~~l~~~la~~~g~~---~~i~~~sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~--~~~~~~g~~~~~~~~----- 177 (427)
T 2w8t_A 108 FHDHMEVEQALRDFYGTT---GAIVFSTGYMANLGIISTLAGKGEYVILDADSHASIY--DGCQQGNAEIVRFRH----- 177 (427)
T ss_dssp CHHHHHHHHHHHHHHTCS---EEEEESCHHHHHHHHHHHHSCTTCEEEEETTCCHHHH--HHHHHSCSEEEEECT-----
T ss_pred cHHHHHHHHHHHHHhCCC---ceEEecCcHHHHHHHHHHhcCCCCEEEECCcccHHHH--HHHHHcCCeeEEeCC-----
Confidence 467889999999999875 2677778889999988888999999999999877654 446778998888873
Q ss_pred CChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcce---------eccCccc
Q 015729 121 AKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAID---------FRMDEWG 191 (401)
Q Consensus 121 ~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~---------~~~~~~~ 191 (401)
.|++++++++++....++++|++++++||+|.+.|+++|.++|++ +|+++|+|++|+.+... ++. ..+
T Consensus 178 ~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~--~g~~li~Dea~~~~~~~~~g~~~~~~~~~-~~~ 254 (427)
T 2w8t_A 178 NSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKK--HGAMVLVDEAHSMGFFGPNGRGVYEAQGL-EGQ 254 (427)
T ss_dssp TCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECCHHHHHHHHHH--TTCEEEEECTTTTTTSSTTSCCHHHHTTC-TTC
T ss_pred CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHH--cCCEEEEECCccccccCCCCCchHhhcCC-CcC
Confidence 489999999986321267999999999999999999999999999 99999999999976543 232 236
Q ss_pred ceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcH
Q 015729 192 IDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGL 271 (401)
Q Consensus 192 ~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~ 271 (401)
+|++++|.+|+++ ++| |++++++++.+.+..... .+. +.++.++..++++.++++.+.. +
T Consensus 255 ~di~~~s~sK~~g-~~g-G~v~~~~~l~~~l~~~~~------------~~~----~~~~~~~~~~aa~~~al~~~~~--~ 314 (427)
T 2w8t_A 255 IDFVVGTFSKSVG-TVG-GFVVSNHPKFEAVRLACR------------PYI----FTASLPPSVVATATTSIRKLMT--A 314 (427)
T ss_dssp CSEEEEESSSTTC-SCC-EEEEECCTTGGGGGGTCH------------HHH----SSCCCCHHHHHHHHHHHHHHTS--C
T ss_pred CcEEEecchhhhc-cCC-CEEEeCHHHHHHHHHhcc------------ccc----ccCCCCHHHHHHHHHHHHHHhc--C
Confidence 7999999999994 777 999999888776654210 010 1234677777777788887642 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC---CCcEEEE
Q 015729 272 ENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV---AGKVFRI 348 (401)
Q Consensus 272 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~---~~~~~Ri 348 (401)
++.++++.++.+++.+.|+++|+++..+. ..+.++++.+++..+..++.+.|.++ ||.+.++..+. ..+++||
T Consensus 315 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-Gi~v~~~~~~~~~~~~~~lRi 390 (427)
T 2w8t_A 315 HEKRERLWSNARALHGGLKAMGFRLGTET---CDSAIVAVMLEDQEQAAMMWQALLDG-GLYVNMARPPATPAGTFLLRC 390 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCEESCSS---CCSSEEEEEESSHHHHHHHHHHHHHT-TEECEEECTTTSCTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcccCCC---CCCCEEEEEECCHHHHHHHHHHHHHC-CeEEeeeCCCCCCCCCeEEEE
Confidence 77899999999999999998887765321 12347788886544567899999877 99998875432 2368999
Q ss_pred eecccCCHHHHHHHHHHHHHHHHhcCCCCC
Q 015729 349 GHLGHLNELQLLGCLAGVEMILKDVGYPVK 378 (401)
Q Consensus 349 ~~~~~~~~~di~~~~~~i~~~l~~~~~~~~ 378 (401)
++...++++|+++++++|++++++++.+..
T Consensus 391 ~~~~~~t~e~i~~~~~~l~~~l~~~~~~~~ 420 (427)
T 2w8t_A 391 SICAEHTPAQIQTVLGMFQAAGRAVGVIGL 420 (427)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHHHTCC--
T ss_pred EeCCCCCHHHHHHHHHHHHHHHHHhCcccc
Confidence 998889999999999999999988766543
No 45
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=6.7e-32 Score=257.86 Aligned_cols=324 Identities=13% Similarity=0.114 Sum_probs=241.5
Q ss_pred CcCChHHHHHHHccCcCC-----C-CCccHHHHHHHHHHHHHHHhcCC--CCceEEecCChhHHHHHHHhccCCCCCeEE
Q 015729 17 PVHIPDQVIRAMNRNNED-----Y-RSPAVPALTKTLLEDIKKIFKTT--SGTPFLIPTTGTGAWESALTNTLSPGDRII 88 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~-----~-~~~~~~~~~~~l~~~la~~~g~~--~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl 88 (401)
|.+.++.|++++.+.... + ......+..+++.+.+++++|.+ +++.+++++|+++|+..++.+++++||+|+
T Consensus 51 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl 130 (407)
T 3nra_A 51 AHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVARGDKVA 130 (407)
T ss_dssp TSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTTCCTTCEEE
T ss_pred CCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEE
Confidence 445667777777664321 1 12344677888888899988875 224599999999999999999999999999
Q ss_pred EEcCCcchHHHHHHHHHcCCcEEEEeC------CCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHH
Q 015729 89 SFLIGQFSLLWIDQQQRLNFNVDVVES------DWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKV 159 (401)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g~~~~~v~~------~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i 159 (401)
+..++|++.. ..++..|++++.++. +.++.+|++++++++++ +++++++++++||||.+.| +++|
T Consensus 131 ~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~v~~~~p~nptG~~~~~~~l~~i 204 (407)
T 3nra_A 131 IVQPDYFANR--KLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKA----GARVFLFSNPNNPAGVVYSAEEIGQI 204 (407)
T ss_dssp EEESCCTHHH--HHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT----TCCEEEEESSCTTTCCCCCHHHHHHH
T ss_pred EcCCcccchH--HHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhh----CCcEEEEcCCCCCCCcccCHHHHHHH
Confidence 9999888764 567788999999998 35667899999999985 5689999999999999998 8889
Q ss_pred HHHhhhcCCCcEEEEecccccCcce----ecc-----CcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCc
Q 015729 160 RKLLDEYRHPALFLVDGVSSICAID----FRM-----DEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVR 229 (401)
Q Consensus 160 ~~l~~~~~~~~~li~D~a~~~~~~~----~~~-----~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~ 229 (401)
.++|++ +|+++|+|++|+.+... ... ...+.++++.|.+|+++ ++.++|++++++++.+.+....
T Consensus 205 ~~~~~~--~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~--- 279 (407)
T 3nra_A 205 AALAAR--YGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAIIARMEKLQ--- 279 (407)
T ss_dssp HHHHHH--HTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHHHHHHHHHH---
T ss_pred HHHHHH--cCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHHHHHHHHHH---
Confidence 999999 99999999999864321 111 23457899999999985 3345799999998877665321
Q ss_pred cccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCcee
Q 015729 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTV 308 (401)
Q Consensus 230 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~ 308 (401)
.. +..+++...++++.++++. ....+++.+++.+++++++.+.|+++ ++.+..+. .+.+
T Consensus 280 ---------~~------~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~~ 339 (407)
T 3nra_A 280 ---------AI------VSLRAAGYSQAVLRGWFDE-APGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQ----AGSY 339 (407)
T ss_dssp ---------HH------HTSSSCHHHHGGGGGTTCC-CTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCS----BSSE
T ss_pred ---------hh------hccCCChHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCC----eeEE
Confidence 00 1122444433333333331 01236778888899999999999987 77775532 2346
Q ss_pred EEEEcCC-CCCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 309 TAVIVPS-HINSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 309 ~~~~~~~-~~~~~~l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+++.++. +.+..++.+.|.+++||.+.+|..+ ...+++||++.. +++++++++++|+++++++
T Consensus 340 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~--~~~~i~~~~~~l~~~~~~~ 405 (407)
T 3nra_A 340 LFPRLPKLAVAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQ--DHEAAVAAARRIVTLVERY 405 (407)
T ss_dssp ECCBCCCBSSCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCS--CHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCC--CHHHHHHHHHHHHHHHHHh
Confidence 6677765 5678899999976669999988543 246789998765 9999999999999998764
No 46
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=100.00 E-value=1.4e-31 Score=255.22 Aligned_cols=318 Identities=15% Similarity=0.130 Sum_probs=241.0
Q ss_pred ChHHHHHHHccCcCC----CCCccH----HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEc
Q 015729 20 IPDQVIRAMNRNNED----YRSPAV----PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~----~~~~~~----~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~ 91 (401)
.++.+++++.+.... +....+ .....++++.+++++|.+ + .+++++|++|+..++.+++++||.|+++.
T Consensus 60 ~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~-~i~~~sGs~a~~~~~~~~~~~gd~v~~~~ 136 (401)
T 1fc4_A 60 NHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGME--D-AILYSSCFDANGGLFETLLGAEDAIISDA 136 (401)
T ss_dssp TCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHTCS--E-EEEESCHHHHHHTTHHHHCCTTCEEEEET
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhCCC--c-EEEeCChHHHHHHHHHHHcCCCCEEEEcc
Confidence 367788777664321 111122 366889999999999986 3 45566778899988888899999999999
Q ss_pred CCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCC--CceEEEEEecCCCcccccchHHHHHHhhhcCCC
Q 015729 92 IGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAH--TIKAICIVHNETATGVTNNLSKVRKLLDEYRHP 169 (401)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~--~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~ 169 (401)
+.|.+.. ..++..|++++.++. .|++++++.+++...+ +++++++++++||||.+.|+++|.++|++ +|
T Consensus 137 ~~~~~~~--~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~--~~ 207 (401)
T 1fc4_A 137 LNHASII--DGVRLCKAKRYRYAN-----NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADK--YD 207 (401)
T ss_dssp TCCHHHH--HHHHTSCSEEEEECT-----TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHH--TT
T ss_pred hhHHHHH--HHHHHcCCceEEECC-----CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHH--cC
Confidence 9776554 456778999888873 4899999988752101 57999999999999999999999999999 99
Q ss_pred cEEEEecccccCcc-e--------eccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHH
Q 015729 170 ALFLVDGVSSICAI-D--------FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKF 240 (401)
Q Consensus 170 ~~li~D~a~~~~~~-~--------~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
+++|+|++|+.+.. + .+.. .+.|+++.|.||+++++.| |++++++++.+.+..... .
T Consensus 208 ~~li~De~~~~g~~~~~g~~~~~~~~~~-~~~di~~~s~sK~~~~~~g-G~~~~~~~~~~~l~~~~~------------~ 273 (401)
T 1fc4_A 208 ALVMVDDSHAVGFVGENGRGSHEYCDVM-GRVDIITGTLGKALGGASG-GYTAARKEVVEWLRQRSR------------P 273 (401)
T ss_dssp EEEEEECTTTTTTSSTTSCCHHHHTTCT-TCCSEEEEESSSTTCSSSC-EEEEECHHHHHHHHHHCH------------H
T ss_pred CEEEEECcccccccCCCCCccHHHcCCC-cCCcEEEecchhhccCCCC-EEEEcCHHHHHHHHHhCc------------C
Confidence 99999999974432 1 2222 2579999999999966776 999999998776653210 0
Q ss_pred hhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHH
Q 015729 241 YNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSS 320 (401)
Q Consensus 241 ~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (401)
+. +.++.+...++++.++++.+.. .++..+++.++++++.+.|+++|+++.. ..+.++++.++++.+..
T Consensus 274 ~~----~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~-----~~~~~~~~~~~~~~~~~ 342 (401)
T 1fc4_A 274 YL----FSNSLAPAIVAASIKVLEMVEA--GSELRDRLWANARQFREQMSAAGFTLAG-----ADHAIIPVMLGDAVVAQ 342 (401)
T ss_dssp HH----HSCCCCHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHHHTTCCBCC-----SSSSEEEEEEECHHHHH
T ss_pred ce----eCCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCcccC-----CCCCEEEEEcCChHHHH
Confidence 00 1224677777778888887643 3678889999999999999998877653 23457778886544567
Q ss_pred HHHHHHHhhCCeEEccCCCCC---CCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 321 EIVRRAWQRYNLSLGLGLNKV---AGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 321 ~l~~~L~~~~~i~v~~g~~~~---~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
++.+.|.++ ||.+.++..+. ..+++||++...++++|+++++++|+++++++++
T Consensus 343 ~l~~~l~~~-gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 399 (401)
T 1fc4_A 343 KFARELQKE-GIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQLGV 399 (401)
T ss_dssp HHHHHHHHT-TEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHC-CcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhCC
Confidence 899999876 99998875432 2357999988788999999999999999988765
No 47
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=1.1e-31 Score=255.21 Aligned_cols=323 Identities=13% Similarity=0.068 Sum_probs=235.4
Q ss_pred CcCChHHHHHHHccCcCCC-CCccHHHHHHHHHHHHHHHhc----CC-CCceEEecCChhHHHHHHHhccCCCCCeEEEE
Q 015729 17 PVHIPDQVIRAMNRNNEDY-RSPAVPALTKTLLEDIKKIFK----TT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~-~~~~~~~~~~~l~~~la~~~g----~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 90 (401)
+.+.++.+++++.+..... ..+.......++++.++++++ .+ .++++++++|+++|++.++.+++++||+|++.
T Consensus 42 ~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~ 121 (391)
T 3h14_A 42 GTGAPRGAVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIG 121 (391)
T ss_dssp SSCSCHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCCCHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhcCCCCEEEEc
Confidence 4555788888888754321 122222235577777777764 22 33459999999999999999999999999999
Q ss_pred cCCcchHHHHHHHHHcCCcEEEEeCCCCC--CCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhh
Q 015729 91 LIGQFSLLWIDQQQRLNFNVDVVESDWGE--GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDE 165 (401)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~--~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~ 165 (401)
.++|++.. ..++..|++++.++.+.++ .+|++++++. +++++++++++||||.+.| +++|.++|++
T Consensus 122 ~p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~-------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~ 192 (391)
T 3h14_A 122 APGYPSYR--QILRALGLVPVDLPTAPENRLQPVPADFAGL-------DLAGLMVASPANPTGTMLDHAAMGALIEAAQA 192 (391)
T ss_dssp ESCCHHHH--HHHHHTTCEEEEEECCGGGTTSCCHHHHTTS-------CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CCCCccHH--HHHHHcCCEEEEeecCcccCCCCCHHHHHhc-------CCeEEEECCCCCCCCccCCHHHHHHHHHHHHH
Confidence 99887764 5677889999999988654 5699888765 3589999999999999997 7788999999
Q ss_pred cCCCcEEEEecccccCcc---eeccCc-ccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHH
Q 015729 166 YRHPALFLVDGVSSICAI---DFRMDE-WGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKF 240 (401)
Q Consensus 166 ~~~~~~li~D~a~~~~~~---~~~~~~-~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
+|+++|+|++|+.+.. +..... .+.++++.|.+|+++ ++.++|++++++++.+.+... ..
T Consensus 193 --~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~-------------~~ 257 (391)
T 3h14_A 193 --QGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVPEDQVRVVERI-------------AQ 257 (391)
T ss_dssp --TTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECCGGGHHHHHHH-------------HH
T ss_pred --cCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeCHHHHHHHHHH-------------Hh
Confidence 9999999999985432 122222 245688999999995 445679999999887765431 00
Q ss_pred hhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCC-CCCH
Q 015729 241 YNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS-HINS 319 (401)
Q Consensus 241 ~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~ 319 (401)
.+.++++...++++.++++ ....+++.++++.++++++.+.|++.++...... ..+.++++.++. +.+.
T Consensus 258 -----~~~~~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 327 (391)
T 3h14_A 258 -----NMFICAPHASQVAALAALD--CDAELQANLDVYKANRKLMLERLPKAGFTRIAPP---DGAFYVYADVSDLTDDS 327 (391)
T ss_dssp -----HTTCCCCHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCC---CBTTEEEEECTTTCSCH
T ss_pred -----hhccCCCHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCC---CeeEEEEEecCccCCCH
Confidence 1123466666566666665 2334778889999999999999998866543221 233567778865 5688
Q ss_pred HHHHHHHHhhCCeEEccCCCCCC---CcEEEEeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 320 SEIVRRAWQRYNLSLGLGLNKVA---GKVFRIGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 320 ~~l~~~L~~~~~i~v~~g~~~~~---~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
.++.+.|.+++||.+.+|..+.. ++++||++.. +++++++++++|++++++...
T Consensus 328 ~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~--~~~~i~~~l~~l~~~~~~~~~ 384 (391)
T 3h14_A 328 RAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR--ATADIEEGLDRLEAFMQARGE 384 (391)
T ss_dssp HHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS--CHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHHhcc
Confidence 89999988766999998855432 5689998776 889999999999999987643
No 48
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=100.00 E-value=1.1e-31 Score=264.17 Aligned_cols=332 Identities=14% Similarity=0.064 Sum_probs=255.5
Q ss_pred cHHHHHHHHHHHHHHHhcCCC-CceE--EecCChhHHHHHHHhccCCCC--------CeEEEEcCCcchHHHHHHHHHcC
Q 015729 39 AVPALTKTLLEDIKKIFKTTS-GTPF--LIPTTGTGAWESALTNTLSPG--------DRIISFLIGQFSLLWIDQQQRLN 107 (401)
Q Consensus 39 ~~~~~~~~l~~~la~~~g~~~-~~~i--~~~~g~t~a~~~~~~~~~~~g--------d~vl~~~~~~~~~~~~~~~~~~g 107 (401)
.......++++.+++++|.+. ++++ ++++|+++|+..++.++..+| |+|+++.+.|++.. ..++..|
T Consensus 136 ~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~--~~~~~~G 213 (514)
T 3mad_A 136 STAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFD--KAAQYFG 213 (514)
T ss_dssp HHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHH--HHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHH--HHHHHcC
Confidence 345667788899999999872 1235 999999999999998877665 89999999888754 5677889
Q ss_pred CcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcc----
Q 015729 108 FNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAI---- 183 (401)
Q Consensus 108 ~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~---- 183 (401)
++++.++.+.++.+|+++|++++++ ++++|++++++||+|.+.|+++|.++|++ +|+++|+|++|+.+..
T Consensus 214 ~~v~~v~~~~~~~~d~~~Le~~i~~----~~~~v~~~~~~nptG~~~~l~~i~~la~~--~~i~livDea~~~~~~~~~~ 287 (514)
T 3mad_A 214 IKLVRTPLDADYRADVAAMREAITP----NTVVVAGSAPGYPHGVVDPIPEIAALAAE--HGIGCHVDACLGGFILPWAE 287 (514)
T ss_dssp CEEEEECBCTTSCBCHHHHHHHCCT----TEEEEEEETTCTTTCCCCCHHHHHHHHHH--HTCEEEEECTTTTTTHHHHH
T ss_pred CeeEEeeeCCCCCCCHHHHHHHhcc----CCEEEEEeCCCCCCccccCHHHHHHHHHH--hCCeEEEecccccccchhHH
Confidence 9999999998888999999999974 57999999999999999999999999999 9999999999886543
Q ss_pred -------eeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHH
Q 015729 184 -------DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLL 256 (401)
Q Consensus 184 -------~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 256 (401)
+++....++|++++|+||+++++.|+|+++++++............+. ........+.++.+...+
T Consensus 288 ~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~gs~~~~~~ 360 (514)
T 3mad_A 288 RLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWP-------GGLYFSPTFAGSRPGALS 360 (514)
T ss_dssp HTTCCCCCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEESSCT-------TCSEEESSSCSSCCHHHH
T ss_pred hcCCCCCcccccCCCCcEEEECchhccCCCCCeEEEEEeCHHHhccccccccccC-------CCcccCCccCCCCchHHH
Confidence 355566789999999999988888999999988775543211100000 000001122445667777
Q ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEc
Q 015729 257 YGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLG 335 (401)
Q Consensus 257 ~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~ 335 (401)
+++.++++.+...++++..++..++++++.+.|+++ |+++..+. . .++++.. .+.+..++.+.|.++ ||.+
T Consensus 361 ~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~----~-~~~~~~~-~~~~~~~l~~~L~~~-Gi~v- 432 (514)
T 3mad_A 361 ATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDP----L-WVIAVAS-DELNIYQVMEEMAGR-GWRL- 432 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCC----S-SEEEEEC-SSSCHHHHHHHHHTT-TCBC-
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCC----e-EEEEEeC-CCCCHHHHHHHHHhc-CCEe-
Confidence 888999998888888999999999999999999997 88776532 2 2666765 556788999999877 9887
Q ss_pred cCCCCCCCcEEEEeecc-cCCHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHccCCC
Q 015729 336 LGLNKVAGKVFRIGHLG-HLNELQLLGCLAGVEMILKDVGYPVKLGSGVAAASAYLQNNIPM 396 (401)
Q Consensus 336 ~g~~~~~~~~~Ri~~~~-~~~~~di~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (401)
++... +..+|+++.. ..+++++++++++|+++++++....+.. +..++.+.+...+|.
T Consensus 433 ~g~~~--~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~~~~~~-~~~~~~yg~~~~~~~ 491 (514)
T 3mad_A 433 NGLHR--PPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRAHPEKA-TGMAPVYGMAAAAPP 491 (514)
T ss_dssp EEETT--TTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHHCTTCC-CTTHHHHHHHHHSCH
T ss_pred ccCCC--CCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-CCceehhhhcccCCH
Confidence 44332 5679998764 4567999999999999998764333222 456788888777774
No 49
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=3.6e-32 Score=256.50 Aligned_cols=310 Identities=14% Similarity=0.108 Sum_probs=230.9
Q ss_pred ChHHHHHHHccCcCC-CCCccHHHHHHHHHHHHHHHhcC-----CCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCC
Q 015729 20 IPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIFKT-----TSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIG 93 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~g~-----~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~ 93 (401)
.++.+.+++.+.... ...+.......++++.++++++. ..++++++++|+++|+..++.+++++||+|+++.++
T Consensus 43 ~~~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~ 122 (370)
T 2z61_A 43 TPKPIVDEGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPC 122 (370)
T ss_dssp CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSC
T ss_pred CCHHHHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 467788777664321 11122222345677777777652 233559999999999999999889999999999999
Q ss_pred cchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEE
Q 015729 94 QFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFL 173 (401)
Q Consensus 94 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li 173 (401)
|++.. ..++..|++++.++ +|++++++++++ +++++++++++||||.+.|.+ |.++|++ +|+++|
T Consensus 123 ~~~~~--~~~~~~g~~~~~v~------~d~~~l~~~l~~----~~~~v~~~~p~nptG~~~~~~-l~~~~~~--~~~~li 187 (370)
T 2z61_A 123 YPCYK--NFIRFLGAKPVFCD------FTVESLEEALSD----KTKAIIINSPSNPLGEVIDRE-IYEFAYE--NIPYII 187 (370)
T ss_dssp CTHHH--HHHHHTTCEEEEEC------SSHHHHHHHCCS----SEEEEEEESSCTTTCCCCCHH-HHHHHHH--HCSEEE
T ss_pred chhHH--HHHHHcCCEEEEeC------CCHHHHHHhccc----CceEEEEcCCCCCcCcccCHH-HHHHHHH--cCCEEE
Confidence 88765 45677899998887 689999999863 578999999999999999999 9999999 999999
Q ss_pred EecccccCcc---eeccC----cccceEEEecCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHHHHHhhcC
Q 015729 174 VDGVSSICAI---DFRMD----EWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLG 244 (401)
Q Consensus 174 ~D~a~~~~~~---~~~~~----~~~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 244 (401)
+|++|+.+.. +.+.. ..+.|+++.|.||+++ ++| +|++++++++.+.+.... . +
T Consensus 188 ~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~-------------~---~ 250 (370)
T 2z61_A 188 SDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYA-MTGWRIGYVISNDEIIEAILKLQ-------------Q---N 250 (370)
T ss_dssp EECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTT-CGGGCCEEEECCHHHHHHHHHHH-------------H---H
T ss_pred EEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccC-CccceEEEEEECHHHHHHHHHHH-------------h---h
Confidence 9999986543 12222 2367999999999984 455 799999998877664320 0 0
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHH
Q 015729 245 TFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVR 324 (401)
Q Consensus 245 ~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 324 (401)
+.++++...++++.++++.....++++.++++.++++++.+.|+++|+++..+ ..+.++++.+++ +..++.+
T Consensus 251 --~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~~~~~~~~~~~--~~~~~~~ 322 (370)
T 2z61_A 251 --LFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGWEVNNP----IGAYYVFPNIGE--DGREFAY 322 (370)
T ss_dssp --HTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCCCC----CBTTEECCBCSS--CHHHHHH
T ss_pred --cccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCC----CcceEEEEecCC--CHHHHHH
Confidence 12246666666666666542233467788899999999999999888776543 234566677754 6788999
Q ss_pred HHHhhCCeEEccCCCCC--CCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 325 RAWQRYNLSLGLGLNKV--AGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 325 ~L~~~~~i~v~~g~~~~--~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
.|.+++||.+.+|..+. ..+++||++. .+++++++++++|+++++
T Consensus 323 ~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~--~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 323 KLLKEKFVALTPGIGFGSKGKNYIRISYA--NSYENIKEGLERIKEFLN 369 (370)
T ss_dssp HHHHHHCEECEEGGGGCGGGSSBEEEECC--SCHHHHHHHHHHHHHHHC
T ss_pred HHHHhCCEEEeCchhhCCCCCCEEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence 99744499999885432 2568999877 599999999999998874
No 50
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=1.2e-31 Score=254.24 Aligned_cols=318 Identities=19% Similarity=0.169 Sum_probs=230.1
Q ss_pred CChHHHHHHHccCcCC-CCCccHHHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHhccCCCCCeEEEEcC
Q 015729 19 HIPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~----g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~ 92 (401)
+.++.+.+++.+.... ...+.......++++.+++++ |.+ .++++++++|+++|+..++.+++++||+|+++.|
T Consensus 44 ~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p 123 (385)
T 1b5p_A 44 DTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123 (385)
T ss_dssp CCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred CCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCC
Confidence 4456777776553211 111221223456777777666 432 3356999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHcCCcEEEEeCCC--CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcC
Q 015729 93 GQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYR 167 (401)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~ 167 (401)
+|+++. ..++..|++++.++.+. ++.+|++++++++++ +++++++++|+||||.+++ +++|.++|++
T Consensus 124 ~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~----~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~-- 195 (385)
T 1b5p_A 124 YWVSYP--EMVRFAGGVVVEVETLPEEGFVPDPERVRRAITP----RTKALVVNSPNNPTGAVYPKEVLEALARLAVE-- 195 (385)
T ss_dssp CCTHHH--HHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCT----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH--
T ss_pred CchhHH--HHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCC----CCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHH--
Confidence 887654 56778899999999875 446899999998863 5799999999999999987 7889999999
Q ss_pred CCcEEEEecccccCcc---eeccCcc--cceEEEecCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHHHHH
Q 015729 168 HPALFLVDGVSSICAI---DFRMDEW--GIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKF 240 (401)
Q Consensus 168 ~~~~li~D~a~~~~~~---~~~~~~~--~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
+|++||+|++|+.+.. ..++... +.++++.|.+|+++ ++| +|++++++++.+.+....
T Consensus 196 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~-~~G~RiG~~~~~~~~~~~l~~~~-------------- 260 (385)
T 1b5p_A 196 HDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFA-MTGWRIGYACGPKEVIKAMASVS-------------- 260 (385)
T ss_dssp TTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTT-CGGGCCEEEECCHHHHHHHHHHH--------------
T ss_pred cCCEEEEEccchhcccCCCCCCHHHcCCCCEEEEEechhhcC-CcccceEEEEeCHHHHHHHHHHH--------------
Confidence 9999999999875432 1122222 56899999999884 555 799999998877654310
Q ss_pred hhcCCCCCCCCcHHHHHHHHHHHHH---HHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcC-CC
Q 015729 241 YNLGTFWPYTPSIQLLYGLRAALDL---IFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVP-SH 316 (401)
Q Consensus 241 ~~~g~~~~~~~~~~~~~a~~~al~~---~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~-~~ 316 (401)
..+ ..+++.....++.++++. . ...+++.++++.++++++.+.|+++|+++..+. .+.++++.++ .+
T Consensus 261 -~~~---~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~~~~~~~~~~~~ 331 (385)
T 1b5p_A 261 -RQS---TTSPDTIAQWATLEALTNQEAS-RAFVEMAREAYRRRRDLLLEGLTALGLKAVRPS----GAFYVLMDTSPIA 331 (385)
T ss_dssp -HTT---TCSCCHHHHHHHHHHHHCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCS----BTTEEEEECTTTC
T ss_pred -hhc---cCCCCHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCC----eeEEEEEecCCCC
Confidence 001 223455555555556643 2 223677888899999999999988887766542 3346667775 24
Q ss_pred CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 317 INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 317 ~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
.+..++.+.|.+ .||.+.+|..+..++++||++. .+++++++++++|+++++
T Consensus 332 ~~~~~l~~~l~~-~gv~v~~g~~f~~~~~iRis~~--~~~~~i~~~l~~l~~~l~ 383 (385)
T 1b5p_A 332 PDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLSYA--TSEENLRKALERFARVLG 383 (385)
T ss_dssp SSHHHHHHHHHH-TTEECEESGGGTCTTEEEEECC--SCHHHHHHHHHHGGGGC-
T ss_pred CCHHHHHHHHHH-CCeEEecccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 678899999984 4999999855433679999876 589999999999987654
No 51
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=4.1e-31 Score=251.01 Aligned_cols=326 Identities=11% Similarity=0.077 Sum_probs=240.3
Q ss_pred CcCChHHHHHHHccCcCC---CCCccHHHHHHHHHHHHHHHhcCC-CCceEEecCChhHHHHHHHhccCCCCCeEEEEcC
Q 015729 17 PVHIPDQVIRAMNRNNED---YRSPAVPALTKTLLEDIKKIFKTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~ 92 (401)
+.+.++.+++++.+.... .+.....+..+++.+.+++.+|.+ .++.+++++|+++|+..++.+++++||+|+++.+
T Consensus 38 ~~~~~~~v~~a~~~~~~~~~~~y~~~~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~ 117 (391)
T 3dzz_A 38 DFKIAPEIMASMEEKLKVAAFGYESVPAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFTSPGDQILVQEP 117 (391)
T ss_dssp SSCCCHHHHHHHHHHHTTCCCCCBCCCHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred CCCCCHHHHHHHHHHHhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHhCCCCCeEEECCC
Confidence 345677888887774432 222234666777888888888743 3345999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHcCCcEEEEeCCC-C--CCCChHHHHHHHhccCCCCceEEEEEecCCCccccc---chHHHHHHhhhc
Q 015729 93 GQFSLLWIDQQQRLNFNVDVVESDW-G--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN---NLSKVRKLLDEY 166 (401)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~-~--~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~---~l~~i~~l~~~~ 166 (401)
+|++.. ..++..|++++.++.+. + +.+|++++++++++ ++++++++++++||||.++ ++++|.++|++
T Consensus 118 ~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~- 191 (391)
T 3dzz_A 118 VYNMFY--SVIEGNGRRVISSDLIYENSKYSVNWADLEEKLAT---PSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAK- 191 (391)
T ss_dssp CCHHHH--HHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTS---TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHH-
T ss_pred CcHHHH--HHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhc---cCceEEEEECCCCCCCcccCHHHHHHHHHHHHH-
Confidence 888754 56778899999998852 2 23899999999974 3679999999999999995 57889999999
Q ss_pred CCCcEEEEecccccCcc----eeccCccc---ce--EEEecCCCccc-CCCcceEEEec-HHHHHHhccCCCCccccchH
Q 015729 167 RHPALFLVDGVSSICAI----DFRMDEWG---ID--VALTGSQKALS-LPTGMGIVCAS-PKALEASKTAKSVRVFFDWK 235 (401)
Q Consensus 167 ~~~~~li~D~a~~~~~~----~~~~~~~~---~d--i~~~s~~K~l~-g~~g~G~l~~~-~~~~~~~~~~~~~~~~~~~~ 235 (401)
+|+++|+|++|+.+.. ........ .| +++.|.||+++ ++.++|+++++ +++.+.+....
T Consensus 192 -~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~--------- 261 (391)
T 3dzz_A 192 -HQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEESF--------- 261 (391)
T ss_dssp -TTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHHH---------
T ss_pred -CCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHHH---------
Confidence 9999999999985432 12222222 44 99999999984 34557999987 87766654310
Q ss_pred HHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH-c-CCccccCCCccCCceeEEEEc
Q 015729 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEA-W-GLKNCTQKEEWFSDTVTAVIV 313 (401)
Q Consensus 236 ~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~ 313 (401)
... + .++++...++++.++++.. ...+++.++++.++++++.+.|++ + |+++..+. .+.++++.+
T Consensus 262 ---~~~--~---~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~----~~~~~~~~~ 328 (391)
T 3dzz_A 262 ---FLA--G---IGEPNLLAIPAAIAAYEEG-HDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSN----ASYLAWVDI 328 (391)
T ss_dssp ---HHH--T---CSSCCTTHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCC----BSSEEEEEC
T ss_pred ---Hhh--c---cCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccC----ceEEEEEeh
Confidence 000 1 1234555556666666542 223678889999999999999998 4 88776542 345667787
Q ss_pred CC-CCCHHHHHHHHHhhCCeEEccCCCCC--CCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 314 PS-HINSSEIVRRAWQRYNLSLGLGLNKV--AGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 314 ~~-~~~~~~l~~~L~~~~~i~v~~g~~~~--~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+. +.+..++.+.|.+++||.+.+|..+. ..+++||++. .+++++++++++|+++++++
T Consensus 329 ~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 329 SALGMNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA--CPKELVIDGMQRLKQGVLNL 389 (391)
T ss_dssp GGGCSCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC--SCHHHHHHHHHHHHHHHHTC
T ss_pred hhcCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 64 46888999999744499999885432 3478999877 48999999999999999865
No 52
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=5.9e-32 Score=256.81 Aligned_cols=314 Identities=19% Similarity=0.158 Sum_probs=232.1
Q ss_pred CChHHHHHHHccCcCCC-CCccHHHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHhccCCCCCeEEEEcC
Q 015729 19 HIPDQVIRAMNRNNEDY-RSPAVPALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~~-~~~~~~~~~~~l~~~la~~~----g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~ 92 (401)
+.++.+.+++.+..... ..+.......++++.+++++ |.+ .++++++++|+++|+..++.+++++||+|+++.+
T Consensus 54 ~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~ 133 (389)
T 1o4s_A 54 PTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSP 133 (389)
T ss_dssp CCCHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred CCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 45677887776643221 11221223456777777766 653 3456999999999999999888999999999999
Q ss_pred CcchHHHHHHHHHcCCcEEEEeCCC--CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcC
Q 015729 93 GQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYR 167 (401)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~ 167 (401)
+|++.. ..++..|++++.++.+. ++.+|++++++++++ +++++++++++||||.++| +++|.++|++
T Consensus 134 ~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~----~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~-- 205 (389)
T 1o4s_A 134 VWVSYI--PQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVG----KTKAVLINSPNNPTGVVYRREFLEGLVRLAKK-- 205 (389)
T ss_dssp CCTTHH--HHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCT----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH--
T ss_pred CchhHH--HHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc----CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHH--
Confidence 988764 45677899999999875 456899999998863 5789999999999999987 8889999999
Q ss_pred CCcEEEEecccccCcce---e---ccCc-ccceEEEecCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHHH
Q 015729 168 HPALFLVDGVSSICAID---F---RMDE-WGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (401)
Q Consensus 168 ~~~~li~D~a~~~~~~~---~---~~~~-~~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (401)
+|+++|+|++|+.+... . .... .+.|+++.|.||+++ ++| +|++++++++.+.+....
T Consensus 206 ~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~l~~~~~~~~~l~~~~------------ 272 (389)
T 1o4s_A 206 RNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHS-MTGWRVGYLISSEKVATAVSKIQ------------ 272 (389)
T ss_dssp HTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTT-CGGGCCEEEECCHHHHHHHHHHH------------
T ss_pred cCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcC-CcccceEEEEeCHHHHHHHHHHh------------
Confidence 99999999999865431 1 1111 468999999999984 455 799999998877664310
Q ss_pred HHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCC
Q 015729 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHIN 318 (401)
Q Consensus 239 ~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (401)
.. + .++.+...+.++.++++ . ++++.++++.++++++.+.|+++|+++..+ ..+.++++.++ .+
T Consensus 273 ~~---~---~~~~~~~~~~a~~~~l~---~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~~~~~~~~~~--~~ 336 (389)
T 1o4s_A 273 SH---T---TSCINTVAQYAALKALE---V-DNSYMVQTFKERKNFVVERLKKMGVKFVEP----EGAFYLFFKVR--GD 336 (389)
T ss_dssp HH---H---TCSCCHHHHHHHHHHTT---C-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCC----SBSSEEEEECS--SC
T ss_pred hh---c---ccCCCHHHHHHHHHHHh---c-cHHHHHHHHHHHHHHHHHHHHhcCCeeecC----CcceEEEEeCC--CC
Confidence 00 1 12244443333333332 2 367889999999999999999888776543 23456777875 56
Q ss_pred HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 319 SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 319 ~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
..++.+.|.++.||.+.++.....++++||++.. +++++++++++|+++++
T Consensus 337 ~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 337 DVKFCERLLEEKKVALVPGSAFLKPGFVRLSFAT--SIERLTEALDRIEDFLN 387 (389)
T ss_dssp HHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS--CHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeC--CHHHHHHHHHHHHHHHh
Confidence 7889999974449999988544335699998774 99999999999998874
No 53
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=6.4e-32 Score=257.87 Aligned_cols=321 Identities=11% Similarity=0.008 Sum_probs=237.2
Q ss_pred CChHHHHHHHccCcCCC--CCccHHHHHHHHHHHHHHHh----cCC-CC-ceEEecCChhHHHHHHHhccCCCCCeEEEE
Q 015729 19 HIPDQVIRAMNRNNEDY--RSPAVPALTKTLLEDIKKIF----KTT-SG-TPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~----g~~-~~-~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 90 (401)
..++.+.+++.+..... ..+.......++++.+++++ |.+ .+ +++++++|+++|+..++.+++++||+|+++
T Consensus 60 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~ 139 (404)
T 2o1b_A 60 PTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLP 139 (404)
T ss_dssp CCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEc
Confidence 45688888887754210 01111123456777777776 875 22 459999999999999999989999999999
Q ss_pred cCCcchHHHHHHHHHcCCcEEEEeCCC-CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhc
Q 015729 91 LIGQFSLLWIDQQQRLNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEY 166 (401)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~ 166 (401)
.++|++.. ..++..|++++.++.+. +..+|+++++++++. +++++++++++||||.++| +++|.++|++
T Consensus 140 ~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~----~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~- 212 (404)
T 2o1b_A 140 DPGYTDYL--AGVLLADGKPVPLNLEPPHYLPDWSKVDSQIID----KTKLIYLTYPNNPTGSTATKEVFDEAIAKFKG- 212 (404)
T ss_dssp ESCCSSHH--HHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHH----HEEEEEECSSCTTTCCCCCHHHHHHHHHHHTT-
T ss_pred CCCchhHH--HHHHHCCCEEEEeccCcccCcCCHHHHHHhhcc----CceEEEEcCCCCCCCccCCHHHHHHHHHHHHH-
Confidence 99988765 45677899999999876 335799999998863 5689999999999999986 6778899999
Q ss_pred CCCcEEEEecccccCcc---eeccC----cccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHH
Q 015729 167 RHPALFLVDGVSSICAI---DFRMD----EWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (401)
Q Consensus 167 ~~~~~li~D~a~~~~~~---~~~~~----~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (401)
+|++||+|++|+.+.. +.+.. ..+.++++.|.+|+++ ++.++|++++++++.+.+...
T Consensus 213 -~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~------------- 278 (404)
T 2o1b_A 213 -TDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKKY------------- 278 (404)
T ss_dssp -SSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHH-------------
T ss_pred -cCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCHHHHHHHHHH-------------
Confidence 9999999999986432 11221 1256899999999984 233479999999987766431
Q ss_pred HHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCC
Q 015729 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHIN 318 (401)
Q Consensus 239 ~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (401)
... +.++.+...++++.++++.. ...+++.++++.++++++.+.|++.|+++..+ ..+.++++.++++.+
T Consensus 279 ~~~-----~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~g~~~~~~~~~~~~ 348 (404)
T 2o1b_A 279 QTH-----TNAGMFGALQDAAIYALNHY-DDFLEEQSNVFKTRRDRFEAMLAKADLPFVHA----KGGIYVWLETPPGYD 348 (404)
T ss_dssp HHH-----HCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCEECC----CBSSEEEEECCTTCC
T ss_pred Hhh-----ccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhcCCeecCC----CcceEEEEeCCCCCC
Confidence 000 12245665556666666542 23467788889999999999999888776543 245568888876677
Q ss_pred HHHHHHHHHhhCCeEEccCCCCC--CCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 319 SSEIVRRAWQRYNLSLGLGLNKV--AGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 319 ~~~l~~~L~~~~~i~v~~g~~~~--~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
..++.+.|.++.||.+.+|..+. .++++||++.. +++++++++++|++++++
T Consensus 349 ~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~--~~e~l~~~l~~l~~~l~~ 402 (404)
T 2o1b_A 349 SEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL--DDQKLDEAAIRLTELAYL 402 (404)
T ss_dssp HHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS--CTTHHHHHHHHHHGGGGG
T ss_pred HHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence 88899998754599999885432 25789998875 788999999999988765
No 54
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-31 Score=263.19 Aligned_cols=332 Identities=10% Similarity=0.042 Sum_probs=244.8
Q ss_pred cHHHHHHHHHHHHHHHhcCC-CCceEEecCChhHHHHHHHhccCC-----CC---CeEEEEcCCcchHHHHHHHHHcCCc
Q 015729 39 AVPALTKTLLEDIKKIFKTT-SGTPFLIPTTGTGAWESALTNTLS-----PG---DRIISFLIGQFSLLWIDQQQRLNFN 109 (401)
Q Consensus 39 ~~~~~~~~l~~~la~~~g~~-~~~~i~~~~g~t~a~~~~~~~~~~-----~g---d~vl~~~~~~~~~~~~~~~~~~g~~ 109 (401)
...+...++++.+++++|.+ .+.++++++|+++|+..++.++.+ +| |+|+++.+.|+++. ..++..|++
T Consensus 104 ~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~--~~~~~~G~~ 181 (497)
T 3mc6_A 104 AVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFD--KAAYYFGMK 181 (497)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHH--HHHHHSCCE
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHH--HHHHHcCCe
Confidence 34567778999999999998 445699999999999998877643 45 89999999887754 667888999
Q ss_pred EEEEeCCC-CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcc-----
Q 015729 110 VDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAI----- 183 (401)
Q Consensus 110 ~~~v~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~----- 183 (401)
++.++.+. ++.+|++++++++++ ++++|++++++||+|.+.|+++|.++|++ +|+++|+|++|+.+..
T Consensus 182 ~~~v~~~~~~~~~d~~~l~~~i~~----~~~~v~~~~p~nptG~~~~l~~i~~la~~--~g~~livD~a~~~~~~~f~~~ 255 (497)
T 3mc6_A 182 LRHVELDPTTYQVDLGKVKKFINK----NTVLLVGSAPNFPHGIADDIEGLGKIAQK--YKLPLHVDSCLGSFIVSFMEK 255 (497)
T ss_dssp EEEECBCTTTCSBCTTTTGGGCCS----SEEEEEEETTCTTTCCCCSCTTTTTHHHH--TTCCEEEETTTTHHHHGGGTT
T ss_pred EEEEecCcccCcCCHHHHHHHHhh----CCEEEEEECCCCCCCcCCCHHHHHHHHHH--hCCEEEEECcchhhhhhhhhh
Confidence 99999987 678999999999874 56999999999999999999999999999 9999999999974332
Q ss_pred -------eeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHH
Q 015729 184 -------DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLL 256 (401)
Q Consensus 184 -------~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 256 (401)
+++....++|++++|+||+++++.|+|+++++++.+..........+.. ..+ ....+.++.+...+
T Consensus 256 ~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~g~~~~~~~ 328 (497)
T 3mc6_A 256 AGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTG------GLY-GSPTLAGSRPGAIV 328 (497)
T ss_dssp TTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTCTT------SCB-CCSSSCSSCBHHHH
T ss_pred hcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhcccccccC------CCc-CCcCcccCCcchhH
Confidence 3556667899999999999888999999999887765443211111000 000 01112334556667
Q ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH-c-CCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEE
Q 015729 257 YGLRAALDLIFEEGLENVIERHRRLGKATRLAVEA-W-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSL 334 (401)
Q Consensus 257 ~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v 334 (401)
+++.++++.+...++++..++..++++++++.|++ + |+++..+. ...++.+.. .+.+..++.+.|.++ ||.+
T Consensus 329 ~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~----~~~~v~~~~-~~~~~~~l~~~L~~~-Gi~v 402 (497)
T 3mc6_A 329 VGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNP----RYSVISFSS-KTLNIHELSDRLSKK-GWHF 402 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCC----CSSEEEEEC-TTTTHHHHHHHHHTT-TCBC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC----CeeEEEEeC-CCCCHHHHHHHHHhC-CEEE
Confidence 88999999888888899999999999999999999 4 88876531 223566665 456788999999877 9887
Q ss_pred ccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCCCCCcc--hHHHHHHHHHHccCC
Q 015729 335 GLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGYPVKLG--SGVAAASAYLQNNIP 395 (401)
Q Consensus 335 ~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~ 395 (401)
..+.. ...+|+++. ..+++|+++++++|+++++++....+.. ....++.+.....+|
T Consensus 403 ~~~~~---~~~~ri~~~-~~t~e~i~~~~~~L~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~ 461 (497)
T 3mc6_A 403 NALQK---PVALHMAFT-RLSAHVVDEICDILRTTVQELKSESNSKPSPDGTSALYGVAGSVK 461 (497)
T ss_dssp EECCS---SCCEEEECC-TTTTCTHHHHHHHHHHHHHHHTCC---------------------
T ss_pred ecCCC---CCeEEEEEe-CCCHHHHHHHHHHHHHHHHHHHhCcCcCCCCCCCCccccccccCC
Confidence 75543 235788776 6899999999999999998875543332 223344444444444
No 55
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.6e-31 Score=255.81 Aligned_cols=324 Identities=13% Similarity=0.093 Sum_probs=238.0
Q ss_pred CChHHHHHHHccCcCCC--CCccHHHHHHHHHHHHHHHh----cCC-CC-ceEEecCChhHHHHHHHhccCCCCCeEEEE
Q 015729 19 HIPDQVIRAMNRNNEDY--RSPAVPALTKTLLEDIKKIF----KTT-SG-TPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~----g~~-~~-~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 90 (401)
..++.+.+++.+..... ..+.......++++.+++++ |.+ .+ +++++++|+++|+..++.+++++||+|+++
T Consensus 50 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~ 129 (412)
T 2x5d_A 50 PTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVP 129 (412)
T ss_dssp CCCHHHHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEc
Confidence 46788888888755321 11221233567888888877 753 22 459999999999999999889999999999
Q ss_pred cCCcchHHHHHHHHHcCCcEEEEeCCCCC--CCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhh
Q 015729 91 LIGQFSLLWIDQQQRLNFNVDVVESDWGE--GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDE 165 (401)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~--~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~ 165 (401)
.++|+++. ..++..|++++.++.+.+. .+|+++++++++ ++++++++++++||||.+++ +++|.++|++
T Consensus 130 ~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~ 203 (412)
T 2x5d_A 130 NPSYPIHI--YGAVIAGAQVRSVPLVPGIDFFNELERAIRESI----PKPRMMILGFPSNPTAQCVELDFFERVVALAKQ 203 (412)
T ss_dssp ESCCHHHH--HHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEE----SCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CCCchhHH--HHHHHcCCEEEEeecCCccCCCCCHHHHHHhcc----cCceEEEECCCCCCCCCcCCHHHHHHHHHHHHH
Confidence 99888764 4566789999999987642 368899998886 35689999999999999987 5779999999
Q ss_pred cCCCcEEEEecccccCcc----ee---ccCc-ccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHH
Q 015729 166 YRHPALFLVDGVSSICAI----DF---RMDE-WGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKD 236 (401)
Q Consensus 166 ~~~~~~li~D~a~~~~~~----~~---~~~~-~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 236 (401)
+|+++|+|++|+.+.. .. .... .+.++++.|.||+++ ++.++|++++++++.+.+...
T Consensus 204 --~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~----------- 270 (412)
T 2x5d_A 204 --YDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARI----------- 270 (412)
T ss_dssp --HTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECHHHHHHHHHH-----------
T ss_pred --cCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcCHHHHHHHHHH-----------
Confidence 9999999999986542 11 1211 467899999999995 333479999999987766531
Q ss_pred HHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCC
Q 015729 237 YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSH 316 (401)
Q Consensus 237 ~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~ 316 (401)
... ..++.+...++++.++++.. ...+++.+++++++++++.+.|++.|+++..+ ..+.++++.+|++
T Consensus 271 --~~~-----~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~g~~~~~~~~~~ 338 (412)
T 2x5d_A 271 --KSY-----HDYGTFTPLQVAAIAALEGD-QQCVRDIARQYQQRRDVLVKGLREAGWMVENP----KASMYVWAKIPEP 338 (412)
T ss_dssp --HHH-----HCCCCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCC----SBSSEEEEECCTT
T ss_pred --Hhh-----hccCCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCEecCC----CeeeEEEEEcCCc
Confidence 000 12245665555555555432 12367788889999999999999888776543 2345788888766
Q ss_pred C---CHHHHHHHHHhhCCeEEccCCCCC--CCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 317 I---NSSEIVRRAWQRYNLSLGLGLNKV--AGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 317 ~---~~~~l~~~L~~~~~i~v~~g~~~~--~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
. +..++.+.|.+++||.+.+|..+. .++++||++.. +++++++++++|++++++++.
T Consensus 339 ~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~~~~ 400 (412)
T 2x5d_A 339 YAHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE--NRDRLRQAVRGIKAMFRADGL 400 (412)
T ss_dssp TGGGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHhcCC
Confidence 5 678899998765599999885432 35789998876 899999999999999988754
No 56
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=3.1e-31 Score=250.53 Aligned_cols=317 Identities=16% Similarity=0.130 Sum_probs=236.3
Q ss_pred HHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHH
Q 015729 22 DQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWID 101 (401)
Q Consensus 22 ~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~ 101 (401)
+++++++...... +.......++++.++++++.-.++.+++++|+++|+..++.+++++||+|+++.++|++.. .
T Consensus 46 ~~~~~~~~~~~~~---y~~~~g~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~--~ 120 (375)
T 3op7_A 46 EDFYKKLQGTKLN---YGWIEGSPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLY--D 120 (375)
T ss_dssp HHHHHHHHTSCCS---SCCTTCCHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHH--H
T ss_pred HHHHHHHhcCCcC---CCCCCChHHHHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHH--H
Confidence 4566666553322 2223345689999999985333345999999999999999999999999999999888764 4
Q ss_pred HHHHcCCcEEEEeCCCC--CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCCCcEEEEec
Q 015729 102 QQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDG 176 (401)
Q Consensus 102 ~~~~~g~~~~~v~~~~~--~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~li~D~ 176 (401)
.++..|++++.++.+.+ +.+|++++++++++ ++++|++++++||||.+.| +++|.++|++ +|+++|+|+
T Consensus 121 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~----~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~--~~~~li~De 194 (375)
T 3op7_A 121 IPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRP----TTKMICINNANNPTGAVMDRTYLEELVEIASE--VGAYILSDE 194 (375)
T ss_dssp HHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCT----TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHT--TTCEEEEEC
T ss_pred HHHHcCCEEEEEeccccCCCCCCHHHHHHhhcc----CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHH--cCCEEEEEc
Confidence 57788999999998643 34799999999973 6799999999999999999 8999999999 999999999
Q ss_pred ccccCcce---eccCcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCc
Q 015729 177 VSSICAID---FRMDEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPS 252 (401)
Q Consensus 177 a~~~~~~~---~~~~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 252 (401)
+|+.+... .-.+..+.++++.|.+|+++ ++.++|++++++++.+.+..... ++..+++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~~~~l~~~~~~~~~------------------~~~~~~~ 256 (375)
T 3op7_A 195 VYRSFSELDVPSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAANHQVTDILRDYRD------------------YTMICAG 256 (375)
T ss_dssp CSCCCSSSCCCCHHHHCTTEEEEEESSSSSSCGGGCCEEEECCHHHHHHHTTTGG------------------GTTSCCC
T ss_pred ccccccccCCCchhhhcCCEEEEeEChhhcCCcccceEEEEeCHHHHHHHHHHHh------------------hhccCCC
Confidence 98864332 11122356788999999995 23446999999999887764321 1123455
Q ss_pred HHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCC
Q 015729 253 IQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYN 331 (401)
Q Consensus 253 ~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 331 (401)
....+++.++++... ..+++.++++.++.+.+.+.|++. ++.+..+. .+.+.++.++.+.+..++++.|.+++|
T Consensus 257 ~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ll~~~g 331 (375)
T 3op7_A 257 VFDDLVAQLALAHYQ-EILERNRHILEENLAILDQWIEEEPLVSYIRPA----VVSTSFVKIAVDMPMEDFCLQLLQEHG 331 (375)
T ss_dssp HHHHHHHHHHHHTHH-HHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCS----SSSCEEEEECCSSCHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHHhhCCCceEecCC----CeEEEeEEcCCCCCHHHHHHHHHHhCC
Confidence 555555666666432 235677788889999999999886 66655432 234556667666678899888865559
Q ss_pred eEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 332 LSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 332 i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
|.+.+|......+++|+++.. +.+++++++++|+++++++.
T Consensus 332 i~v~~g~~~~~~~~iRi~~~~--~~~~i~~~l~~l~~~l~~~~ 372 (375)
T 3op7_A 332 VLLVPGNRFERDGYVRLGFAC--EQETLIKGLEKLSQFLRRFD 372 (375)
T ss_dssp EECEEGGGGTCTTEEEECCCS--CHHHHHHHHHHHHHHHGGGC
T ss_pred EEEeChhhhCCCCeEEEEecC--CHHHHHHHHHHHHHHHHHHh
Confidence 999988654457899998765 56999999999999997653
No 57
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=1.5e-31 Score=253.31 Aligned_cols=316 Identities=18% Similarity=0.175 Sum_probs=236.5
Q ss_pred CChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH
Q 015729 19 HIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL 98 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~ 98 (401)
+.++.+.+++.+.......+.......++++.++++++.++++ +++++|+++|+..++.+++++||+|+++.++|++..
T Consensus 38 ~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~~~-v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~ 116 (381)
T 1v2d_A 38 PPPPFLLEAVRRALGRQDQYAPPAGLPALREALAEEFAVEPES-VVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYL 116 (381)
T ss_dssp CCCHHHHHHHHHHTTTSCSCCCTTCCHHHHHHHHHHHTSCGGG-EEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHhcCCChhh-EEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHH
Confidence 3567777777664432111222234678999999999987544 999999999999999888999999999999988765
Q ss_pred HHHHHHHcCCcEEEEeCC---CCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCCCcEE
Q 015729 99 WIDQQQRLNFNVDVVESD---WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALF 172 (401)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~---~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~l 172 (401)
..++..|++++.++.+ .++.+|++++++.++ ++++++++++++||||.++| +++|.++|++ +|+++
T Consensus 117 --~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~----~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~--~~~~l 188 (381)
T 1v2d_A 117 --PDAFLAGAKARLVRLDLTPEGFRLDLSALEKALT----PRTRALLLNTPMNPTGLVFGERELEAIARLARA--HDLFL 188 (381)
T ss_dssp --HHHHHTTCEEEEEECEEETTEEECCHHHHHTTCC----TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH--TTCEE
T ss_pred --HHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcC----cCCEEEEECCCCCCCCCccCHHHHHHHHHHHHH--cCCEE
Confidence 4577889999999986 456789999999886 36799999999999999986 7889999999 99999
Q ss_pred EEecccccCcc---eeccC--cccceEEEecCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCC
Q 015729 173 LVDGVSSICAI---DFRMD--EWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGT 245 (401)
Q Consensus 173 i~D~a~~~~~~---~~~~~--~~~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 245 (401)
|+|++|+.+.. ..++. ..+.|+++.|.||+++ ++| +|++++++++.+.+... ....
T Consensus 189 i~De~~~~~~~g~~~~~~~~~~~~~~~~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~-------------~~~~--- 251 (381)
T 1v2d_A 189 ISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLE-ATGYRVGWIVGPKEFMPRLAGM-------------RQWT--- 251 (381)
T ss_dssp EEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTT-CGGGCCEEEECCTTTHHHHHHH-------------HHHH---
T ss_pred EEEcCccccccCCCCCCHHHhcCCCEEEEeechhhcC-CcccceEEEEeCHHHHHHHHHH-------------Hhhc---
Confidence 99999985432 11222 3468999999999884 445 79999998877665421 1111
Q ss_pred CCCCCCcHHHHHHHHHHHHHHH-HhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHH
Q 015729 246 FWPYTPSIQLLYGLRAALDLIF-EEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVR 324 (401)
Q Consensus 246 ~~~~~~~~~~~~a~~~al~~~~-~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 324 (401)
.++++...++++.++++... ..++++.++++.++++++.+.|++.|+++..+. .+.++++.+++. + +.+
T Consensus 252 --~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~~~~~~~~~~~-~---~~~ 321 (381)
T 1v2d_A 252 --SFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVYVPE----GTYFLMAELPGW-D---AFR 321 (381)
T ss_dssp --TSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTCCEECCS----BSSEEEEECTTC-C---HHH
T ss_pred --ccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHCCCEecCCC----cceEEEEecChH-h---HHH
Confidence 22456666667777777543 334778899999999999999999888776542 345777888643 2 555
Q ss_pred HHHhhCCeEEccCCCCC----CCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 325 RAWQRYNLSLGLGLNKV----AGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 325 ~L~~~~~i~v~~g~~~~----~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.|. ++||.+.++..+. .++++||++.. +++++++++++|++++++.
T Consensus 322 ~l~-~~gi~v~~g~~~~~~~~~~~~iRi~~~~--~~~~i~~~~~~l~~~l~~~ 371 (381)
T 1v2d_A 322 LVE-EARVALIPASAFYLEDPPKDLFRFAFCK--TEEELHLALERLGRVVNSP 371 (381)
T ss_dssp HHH-HTCEECEEGGGGCSSSCCTTEEEEECCS--CHHHHHHHHHHHHHHC---
T ss_pred HHH-hCCEEEecchHhCCCCCCCCEEEEEeCC--CHHHHHHHHHHHHHHHhhc
Confidence 554 4599999885432 35789998766 9999999999999988653
No 58
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=4.6e-31 Score=250.50 Aligned_cols=321 Identities=13% Similarity=0.109 Sum_probs=231.5
Q ss_pred CChHHHHHHHccCcCC-CCCccHHHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHhccCCCCCeEEEEcC
Q 015729 19 HIPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~----g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~ 92 (401)
+.++.+.+++.+.... ...+.......++++.+++++ |.+ .++++++++|+++|+..++.+++++||+|+++.+
T Consensus 43 ~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~ 122 (388)
T 1j32_A 43 NTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAP 122 (388)
T ss_dssp CCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESS
T ss_pred CCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCC
Confidence 4567777777664311 111211122345555555554 543 3356999999999999999988999999999999
Q ss_pred CcchHHHHHHHHHcCCcEEEEeCCC--CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcC
Q 015729 93 GQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYR 167 (401)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~ 167 (401)
+|++.. ..++..|++++.++.+. ++.+|++++++++++ +++++++++++||||.++| +++|.++|++
T Consensus 123 ~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~----~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~-- 194 (388)
T 1j32_A 123 FWVSYP--EMVKLAEGTPVILPTTVETQFKVSPEQIRQAITP----KTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVE-- 194 (388)
T ss_dssp CCTHHH--HHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCT----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH--
T ss_pred CChhHH--HHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCc----CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHH--
Confidence 988764 45677899999999875 456899999999873 5799999999999999975 8889999999
Q ss_pred CCcEEEEecccccCcce-------eccC--cccceEEEecCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHH
Q 015729 168 HPALFLVDGVSSICAID-------FRMD--EWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKD 236 (401)
Q Consensus 168 ~~~~li~D~a~~~~~~~-------~~~~--~~~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 236 (401)
+|+++|+|++|+.+... ..+. ..+.|+++.|.||++ +++| +|++++++++.+.+....
T Consensus 195 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~-~~~G~r~G~~~~~~~~~~~l~~~~---------- 263 (388)
T 1j32_A 195 AGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTY-AMTGWRVGFLAGPVPLVKAATKIQ---------- 263 (388)
T ss_dssp HTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTT-TCTTTCCEEEECCHHHHHHHHHHH----------
T ss_pred cCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhcc-CCcccceEEEEeCHHHHHHHHHHH----------
Confidence 99999999998864321 1111 145799999999998 4555 899999998877664310
Q ss_pred HHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCC
Q 015729 237 YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPS 315 (401)
Q Consensus 237 ~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~ 315 (401)
..+ .++.+.....++.++++.. ...+++.++++.++++++.+.|+++ |+++..+. .+.++++.++.
T Consensus 264 -----~~~---~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~----~~~~~~~~~~~ 330 (388)
T 1j32_A 264 -----GHS---TSNVCTFAQYGAIAAYENS-QDCVQEMLAAFAERRRYMLDALNAMPGLECPKPD----GAFYMFPSIAK 330 (388)
T ss_dssp -----HTT---TCSCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCC----BTTEECCBCGG
T ss_pred -----hhc---ccCCCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCC----eeEEEEEecCC
Confidence 001 2234444444444444421 2236778888999999999999987 87765532 33456666643
Q ss_pred -CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 316 -HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 316 -~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+.+..++.+.|.+++||.+.+|.....++++||++. .+++++++++++|+++++++
T Consensus 331 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 331 TGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYA--TDLDTIKRGMERLEKFLHGI 387 (388)
T ss_dssp GTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 457888999998645999998854434678999875 58999999999999988754
No 59
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=1.2e-30 Score=242.85 Aligned_cols=306 Identities=12% Similarity=0.054 Sum_probs=232.3
Q ss_pred CCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcc
Q 015729 16 GPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQF 95 (401)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~ 95 (401)
.|.++++.+.+++.+.......+ ......++++.+++++|.++. .+++++|+++++..++..+ +||+|+++.++|+
T Consensus 26 ~~~~~~~~v~~a~~~~~~~~~~y-~~~~~~~lr~~la~~~~~~~~-~i~~t~G~~~~l~~~~~~~--~gd~vl~~~p~~~ 101 (337)
T 3p1t_A 26 NPEAVEPRVQAAIAAAAARINRY-PFDAEPRVMRKLAEHFSCPED-NLMLVRGIDECFDRISAEF--SSMRFVTAWPGFD 101 (337)
T ss_dssp CCSCCCHHHHHHHHHHGGGTTSC-CTTHHHHHHHHHHHHHTSCGG-GEEEESHHHHHHHHHHHHS--TTSEEEEESSSCS
T ss_pred CCCCCCHHHHHHHHHhhhhhccC-CCCchHHHHHHHHHHhCcCHH-HEEEeCCHHHHHHHHHHhc--CCCeEEEeCCCcH
Confidence 47778899999988855433223 235678999999999998754 4999999999999988776 8999999999888
Q ss_pred hHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEe
Q 015729 96 SLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVD 175 (401)
Q Consensus 96 ~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D 175 (401)
++. ..++..|++++.++.+.++.+|++++++. .+++++++++++||||.+.|++++.++|++ +++ +|+|
T Consensus 102 ~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~------~~~~~v~i~~p~nptG~~~~~~~l~~l~~~--~~~-~ivD 170 (337)
T 3p1t_A 102 GYR--ARIAVSGLRHFEIGLTDDLLLDPNDLAQV------SRDDCVVLANPSNPTGQALSAGELDQLRQR--AGK-LLID 170 (337)
T ss_dssp HHH--HHHTTSCCEEEEECBCTTSSBCHHHHTTC------CTTEEEEEESSCTTTCCCCCHHHHHHHHHH--CSE-EEEE
T ss_pred HHH--HHHHHcCCEEEEecCCCCCCCCHHHHHhh------cCCCEEEEeCCCCCCCCCCCHHHHHHHHHh--CCc-EEEE
Confidence 764 56778899999999988888999998865 246899999999999999999999999999 886 5669
Q ss_pred cccccCcc--eeccCcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCc
Q 015729 176 GVSSICAI--DFRMDEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPS 252 (401)
Q Consensus 176 ~a~~~~~~--~~~~~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 252 (401)
++|+.... .......+.++++.|.+|+++ .+.++|+++.++++.+.+.... ..++++
T Consensus 171 ea~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~l~~~~--------------------~~~~~~ 230 (337)
T 3p1t_A 171 ETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQ--------------------WFCNVG 230 (337)
T ss_dssp CTTGGGSSCSSSCCCCBTTEEEEEESSSTTCCTTTCCEEEECCHHHHHHHHTTS--------------------CTTCSC
T ss_pred CCChhhccccccccccCCCEEEEeeCchhccCcchheEEEEeCHHHHHHHHhhc--------------------CCCCCC
Confidence 99873221 112223357899999999995 3455699999999888775431 123456
Q ss_pred HHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCe
Q 015729 253 IQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNL 332 (401)
Q Consensus 253 ~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i 332 (401)
...+.++.++++.. ..+++.+++..++++++.+.|+++|+++..+. . .++++..++ ..++.+.|.++ ||
T Consensus 231 ~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~-~~~~~~~~~---~~~~~~~l~~~-gi 299 (337)
T 3p1t_A 231 TLDLHALEAALDND--RAREAHIAKTLAQRRRVADALRGLGYRVASSE----A-NFVLVENAA---GERTLRFLRER-GI 299 (337)
T ss_dssp HHHHHHHHHHHTCH--HHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCS----S-SEEEEECTT---THHHHHHHHHT-TE
T ss_pred HHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHHCcCEECCCC----C-eEEEEEcCC---HHHHHHHHHHC-Ce
Confidence 65555555555431 12566777778888999999998887765432 2 356666643 45777777655 99
Q ss_pred EEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 333 SLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 333 ~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
.+.+|..+..++++||++. +++|+++++++|++++
T Consensus 300 ~v~~g~~~~~~~~iRis~~---~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 300 QVKDAGQFGLHHHIRISIG---REEDNDRLLAALAEYS 334 (337)
T ss_dssp ECEEGGGGTCCSEEEEECC---CHHHHHHHHHHHHHHT
T ss_pred EEEECccCCCCCeEEEecC---CHHHHHHHHHHHHHHh
Confidence 9999876555689999864 7999999999998875
No 60
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=5e-32 Score=258.02 Aligned_cols=321 Identities=16% Similarity=0.077 Sum_probs=234.9
Q ss_pred ChHHHHHHHccCcCC----CCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcc
Q 015729 20 IPDQVIRAMNRNNED----YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQF 95 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~ 95 (401)
.++.+.+++.+.... ...+.......++++.+++++|.++ +++++++|+++|+..++.+++++||+|++..++|+
T Consensus 48 ~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~-~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~ 126 (397)
T 2zyj_A 48 PKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWIGVRP-EEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYM 126 (397)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHHTSCG-GGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCH
T ss_pred CHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHhCCCh-hhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcH
Confidence 467777777664321 1122222345689999999998654 45999999999999999988999999999999888
Q ss_pred hHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEE-EEEecCCCcccccchH---HHHHHhhhcCCCcE
Q 015729 96 SLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAI-CIVHNETATGVTNNLS---KVRKLLDEYRHPAL 171 (401)
Q Consensus 96 ~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i-~~~~~~n~tG~~~~l~---~i~~l~~~~~~~~~ 171 (401)
+.. ..++..|++++.++.+.++ +|++++++++++ .+++++ ++++++||||.+.|.+ +|.++|++ +|++
T Consensus 127 ~~~--~~~~~~g~~~~~~~~~~~~-~d~~~l~~~l~~---~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~--~~~~ 198 (397)
T 2zyj_A 127 GAI--QAFRLQGPRFLTVPAGEEG-PDLDALEEVLKR---ERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVME--RGLV 198 (397)
T ss_dssp HHH--HHHHTTCCEEEEEEEETTE-ECHHHHHHHHHH---CCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHH--HTCC
T ss_pred HHH--HHHHHcCCEEEecCcCCCC-CCHHHHHHHHhh---cCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHH--cCCE
Confidence 764 4567789999999987654 899999999975 246887 5689999999999755 78999999 9999
Q ss_pred EEEecccccCcc----eeccCcc------cceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHh
Q 015729 172 FLVDGVSSICAI----DFRMDEW------GIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFY 241 (401)
Q Consensus 172 li~D~a~~~~~~----~~~~~~~------~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (401)
+|+|++|+.+.. +.+.... +.++++.|.||+++++.++|++++++++.+.+.... ..+
T Consensus 199 li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~l~~~~------------~~~ 266 (397)
T 2zyj_A 199 VVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLSPGLRVAFAVAHPEALQKLVQAK------------QGA 266 (397)
T ss_dssp EEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTCGGGCCEEEECCHHHHHHHHHHH------------HHH
T ss_pred EEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEecccccccccceeEEEecCHHHHHHHHHHH------------Hhh
Confidence 999999986432 1222222 234889999999963345799999998877664310 001
Q ss_pred hcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc---CCccccCCCccCCceeEEEEcCCCCC
Q 015729 242 NLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW---GLKNCTQKEEWFSDTVTAVIVPSHIN 318 (401)
Q Consensus 242 ~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (401)
.++.+...+.++.++++......+++.++++.++++++.+.|++. |+.+..+ ..+.++++.++++.+
T Consensus 267 ------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~----~~g~~~~~~~~~~~~ 336 (397)
T 2zyj_A 267 ------DLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRP----KGGMFVWMELPKGLS 336 (397)
T ss_dssp ------HSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECCC----SBSSEEEEECSTTCC
T ss_pred ------cCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEccC----CccEEEEEEcCCCCC
Confidence 112344444555555543211236677888889999999999885 6766543 234578888876778
Q ss_pred HHHHHHHHHhhCCeEEccCCCCC----CCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 319 SSEIVRRAWQRYNLSLGLGLNKV----AGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 319 ~~~l~~~L~~~~~i~v~~g~~~~----~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
..++.+.|.++ ||.+.+|.... .++++||++.. .+++|+++++++|+++++++
T Consensus 337 ~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~l~~~ 393 (397)
T 2zyj_A 337 AEGLFRRALEE-NVAFVPGGPFFANGGGENTLRLSYAT-LDREGIAEGVRRLGRALKGL 393 (397)
T ss_dssp HHHHHHHHHHT-TEEEEESGGGCTTSCCTTEEEEECSS-SCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC-CCEEechHHhcCCCCCCCeEEEEcCC-CCHHHHHHHHHHHHHHHHHH
Confidence 88999999877 99999885321 35789998776 48999999999999988753
No 61
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=2.7e-31 Score=255.35 Aligned_cols=321 Identities=12% Similarity=0.057 Sum_probs=238.6
Q ss_pred cCChHHHHHHHccCcCCC--CCccHHHHHHHHHHHHHHHhc-----CCCCceEEecCChhHHHHHHHhccCCCCCeEEEE
Q 015729 18 VHIPDQVIRAMNRNNEDY--RSPAVPALTKTLLEDIKKIFK-----TTSGTPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (401)
Q Consensus 18 ~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~g-----~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 90 (401)
.++++.+++++.+..... ..+.......++++.++++++ .+. +++++++|+++|+..++..++++||+|+++
T Consensus 70 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~-~~v~~t~g~t~al~~~~~~l~~~gd~vl~~ 148 (427)
T 3dyd_A 70 LPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCPEAPLEA-KDVILTSGCSQAIDLCLAVLANPGQNILVP 148 (427)
T ss_dssp SCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBTTBCCCG-GGEEEESSHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhcCCCCCh-HHEEEecCcHHHHHHHHHHhcCCCCEEEEc
Confidence 478889998888754321 123333456789999999998 333 459999999999999999989999999999
Q ss_pred cCCcchHHHHHHHHHcCCcEEEEeCCC--CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhh
Q 015729 91 LIGQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDE 165 (401)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~ 165 (401)
.++|+++. ..++..|++++.++.++ ++.+|++++++.+++ +++++++++++||||.+.+ +++|.++|++
T Consensus 149 ~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 222 (427)
T 3dyd_A 149 RPGFSLYK--TLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDE----KTACLIVNNPSNPCGSVFSKRHLQKILAVAAR 222 (427)
T ss_dssp ESCCTHHH--HHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCT----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CCCchhHH--HHHHHcCCEEEEEecccccCCCCCHHHHHHHhcc----CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
Confidence 99887654 56788899999998754 456899999998864 5689999999999999999 8899999999
Q ss_pred cCCCcEEEEecccccCcc----eeccCccc---ceEEEecCCCcccCCCc--ceEEEecH-------HHHHHhccCCCCc
Q 015729 166 YRHPALFLVDGVSSICAI----DFRMDEWG---IDVALTGSQKALSLPTG--MGIVCASP-------KALEASKTAKSVR 229 (401)
Q Consensus 166 ~~~~~~li~D~a~~~~~~----~~~~~~~~---~di~~~s~~K~l~g~~g--~G~l~~~~-------~~~~~~~~~~~~~ 229 (401)
+|+++|+|++|+.+.. .......+ ..+++.|.+|.++ .+| +|++++++ ++.+.+...
T Consensus 223 --~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~-~~G~riG~~~~~~~~~~~~~~i~~~l~~~---- 295 (427)
T 3dyd_A 223 --QCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWL-VPGWRLGWILIHDRRDIFGNEIRDGLVKL---- 295 (427)
T ss_dssp --TTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSS-CGGGCCEEEEEECSTTSSHHHHHHHHHHH----
T ss_pred --CCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCC-CcCcceEEEEecCcchhhHHHHHHHHHHH----
Confidence 9999999999986431 11222222 2477889999863 444 79998874 444333211
Q ss_pred cccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCcee
Q 015729 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTV 308 (401)
Q Consensus 230 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~ 308 (401)
... .++++...++++.++++.....++++.++++.++++++.+.|+++ |+.+..+. .+.+
T Consensus 296 ------------~~~---~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p~----~g~~ 356 (427)
T 3dyd_A 296 ------------SQR---ILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPS----GAMY 356 (427)
T ss_dssp ------------HHH---HCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCS----BTTE
T ss_pred ------------Hhc---cCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCC----eeEE
Confidence 000 124666666666666664334456788888999999999999997 87765432 3346
Q ss_pred EEEEcC-----CCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 309 TAVIVP-----SHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 309 ~~~~~~-----~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+++.++ ++.+..++++.|.+++||.+.+|..+..++++||++. .+++++++++++|+++++++
T Consensus 357 ~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~--~~~e~i~~~l~~l~~~l~~~ 424 (427)
T 3dyd_A 357 LMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVIT--VPEVMMLEACSRIQEFCEQH 424 (427)
T ss_dssp EEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESC--SCHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEEC--CCHHHHHHHHHHHHHHHHHh
Confidence 666664 2356778888887555999999865555789999865 68999999999999998765
No 62
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=4.3e-31 Score=254.73 Aligned_cols=341 Identities=11% Similarity=-0.012 Sum_probs=239.5
Q ss_pred CcCChHHHHHHHccCcCCC--CCccHHHHHHHHHHHHHHHhc----CC-CCceEEecCChhHHHHHHHhccC--CCCC--
Q 015729 17 PVHIPDQVIRAMNRNNEDY--RSPAVPALTKTLLEDIKKIFK----TT-SGTPFLIPTTGTGAWESALTNTL--SPGD-- 85 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~g----~~-~~~~i~~~~g~t~a~~~~~~~~~--~~gd-- 85 (401)
|.+.++.+++++.+..... ..+.......++++.++++++ .+ .++++++++|+++|+..++.+++ ++||
T Consensus 55 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~ 134 (437)
T 3g0t_A 55 GLPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREY 134 (437)
T ss_dssp CSCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSC
T ss_pred CCCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHHHHHhcCCCCCcc
Confidence 4456788888877643311 112212223567777777776 22 23459999999999999999888 9999
Q ss_pred eEEEEcCCcchHHHHHHHHHcCCcEEEEeCCC-CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHH
Q 015729 86 RIISFLIGQFSLLWIDQQQRLNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRK 161 (401)
Q Consensus 86 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~ 161 (401)
+|+++.++|++.. ..++..|++++.++.+. ++.+|+++++++++. ++++++++++|+||||.+.+ +++|.+
T Consensus 135 ~Vl~~~p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~ 209 (437)
T 3g0t_A 135 GTLFIDPGFNLNK--LQCRILGQKFESFDLFEYRGEKLREKLESYLQT---GQFCSIIYSNPNNPTWQCMTDEELRIIGE 209 (437)
T ss_dssp CEEEEESCCHHHH--HHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTT---TCCCEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred EEEEeCCCcHhHH--HHHHHcCCEEEEEeecCCCCccCHHHHHHHHhc---CCceEEEEeCCCCCCCCcCCHHHHHHHHH
Confidence 9999999887754 55677899999999864 346799999999943 46799999999999999997 666899
Q ss_pred HhhhcCCCcEEEEecccccCcc----e--------eccCc-ccceEEEecCCCccc-CCCcceEEEecHHHHH-HhccCC
Q 015729 162 LLDEYRHPALFLVDGVSSICAI----D--------FRMDE-WGIDVALTGSQKALS-LPTGMGIVCASPKALE-ASKTAK 226 (401)
Q Consensus 162 l~~~~~~~~~li~D~a~~~~~~----~--------~~~~~-~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~-~~~~~~ 226 (401)
+|++ +|+++|+|++|+.+.. + ..... .+.++++.|.||+++ ++.++|++++++++.+ .+....
T Consensus 210 ~a~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 287 (437)
T 3g0t_A 210 LATK--HDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKLYEREYPDLE 287 (437)
T ss_dssp HHHH--TTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECHHHHHCBCGGGH
T ss_pred HHHH--CCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECHHHhhhhhhccc
Confidence 9999 9999999999975332 1 12222 567899999999985 3345799999998877 521100
Q ss_pred CCccccch-HHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHcCCccc------
Q 015729 227 SVRVFFDW-KDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG--LENVIERHRRLGKATRLAVEAWGLKNC------ 297 (401)
Q Consensus 227 ~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g--~~~~~~~~~~~~~~l~~~L~~~g~~~~------ 297 (401)
.......+ ..+...... ...++++...+.++.++++...... +++.++++.++++++.+.|+++|+++.
T Consensus 288 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 365 (437)
T 3g0t_A 288 ESFGRLRFGEALSSSALY--ALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDNGFNIVYDKDGN 365 (437)
T ss_dssp HHHSCSBHHHHHHTTHHH--HHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTTTEEESSCEETT
T ss_pred ccccccchhHHHHHHHHh--hhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHcCCEEeccccCC
Confidence 00000000 000000000 0123466666666677776543211 788999999999999999998887766
Q ss_pred cCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCC--CcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 298 TQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVA--GKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~--~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.+. ..+.++++.++ +.+..++.+.|.++ ||.+.++..+.. ++++||++. ..+++|+++++++|++++++
T Consensus 366 ~~~---~~~~~~~~~~~-~~~~~~l~~~L~~~-gi~v~~~~~~~~~~~~~iRis~~-~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 366 EPL---ADGFYFTVGYK-GMDSSKLIEKFVRY-GMCAITLKTTGSKRNEAMRICTS-LLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp EEC---CSSSEEEEEET-TCCHHHHHHHHHHT-TEECEESTTTTCCCTTCEEEECS-SSCGGGHHHHHHHHHHHHHH
T ss_pred CCC---ceeEEEEEecC-CCCHHHHHHHHHHc-CeEEeeccccCCCCCCEEEEEEe-cCCHHHHHHHHHHHHHHHhc
Confidence 120 23457788886 67889999999877 999998865422 267999876 46999999999999998764
No 63
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=2.1e-30 Score=246.14 Aligned_cols=321 Identities=11% Similarity=0.013 Sum_probs=239.8
Q ss_pred CcCChHHHHHHHccCcCC---CCCccHHHHHHHHHHHHHHHhcCC-CCceEEecCChhHHHHHHHhccCCCCCeEEEEcC
Q 015729 17 PVHIPDQVIRAMNRNNED---YRSPAVPALTKTLLEDIKKIFKTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~ 92 (401)
+.+.++.+++++.+.... .+.....+...++++.+++.+|.+ .++++++++|+++|++.++.+++++||+|+++.+
T Consensus 43 ~~~~~~~v~~a~~~~~~~~~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~ 122 (391)
T 4dq6_A 43 DFKAAPCIIDSLKNRLEQEIYGYTTRPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEP 122 (391)
T ss_dssp SSCCCHHHHHHHHHHHTTCCCCCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCC
Confidence 345678888888774432 222345677888999999999843 2345999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHcCCcEEEEeCC--CC--CCCChHHHHHHHhccCCCCceEEEEEecCCCccccc---chHHHHHHhhh
Q 015729 93 GQFSLLWIDQQQRLNFNVDVVESD--WG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN---NLSKVRKLLDE 165 (401)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~--~~--~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~---~l~~i~~l~~~ 165 (401)
+|++.. ..++..|++++.++.+ .+ +.+|++++++++++ ++++++++++||||.++ ++++|.++|++
T Consensus 123 ~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-----~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 195 (391)
T 4dq6_A 123 VYSPFN--SVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-----VKLFILCNPHNPVGRVWTKDELKKLGDICLK 195 (391)
T ss_dssp CCTHHH--HHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-----EEEEEEESSBTTTTBCCCHHHHHHHHHHHHH
T ss_pred CCHHHH--HHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-----CCEEEEECCCCCCCcCcCHHHHHHHHHHHHH
Confidence 888764 4567789999999987 22 24899999999874 68999999999999995 47788889999
Q ss_pred cCCCcEEEEecccccCcc----eeccCcc-----cceEEEecCCCccc-CCCcceEEEecH-HHHHHhccCCCCccccch
Q 015729 166 YRHPALFLVDGVSSICAI----DFRMDEW-----GIDVALTGSQKALS-LPTGMGIVCASP-KALEASKTAKSVRVFFDW 234 (401)
Q Consensus 166 ~~~~~~li~D~a~~~~~~----~~~~~~~-----~~di~~~s~~K~l~-g~~g~G~l~~~~-~~~~~~~~~~~~~~~~~~ 234 (401)
+|+++|+|++|+.+.. ....... +.++++.|.||+++ ++.++|++++++ ++.+.+....
T Consensus 196 --~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~-------- 265 (391)
T 4dq6_A 196 --HNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAF-------- 265 (391)
T ss_dssp --TTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHH--------
T ss_pred --cCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHHHHHHHH--------
Confidence 9999999999986432 1122222 34588999999984 334579998875 6666554210
Q ss_pred HHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH-c-CCccccCCCccCCceeEEEE
Q 015729 235 KDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEA-W-GLKNCTQKEEWFSDTVTAVI 312 (401)
Q Consensus 235 ~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~ 312 (401)
... ..++++...++++.++++.. ...+++.+++++++++++.+.|++ + |+.+..+. .+.++++.
T Consensus 266 -------~~~--~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~----~~~~~~~~ 331 (391)
T 4dq6_A 266 -------TRI--DIKRNNCFSLVATEASYNNG-ESWLESFLEYLESNIDFAIKYINENMPKLKVRKPE----GTYLLWVD 331 (391)
T ss_dssp -------HHT--TCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCS----BSSEEEEE
T ss_pred -------Hhh--cCCCCCHHHHHHHHHHHhch-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecCCC----ccEEEEEE
Confidence 001 12346666666666666642 223677888999999999999988 4 77776542 34566788
Q ss_pred cCC-CCCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 313 VPS-HINSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 313 ~~~-~~~~~~l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
++. +.+..++.+.|.+++||.+.+|... ..++++||++. .+++++++++++|++++
T Consensus 332 ~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 332 FSALGLSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLA--CPRSMLEEALIRIKNAI 390 (391)
T ss_dssp CGGGCCCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC--SCHHHHHHHHHHHHHHH
T ss_pred hhhcCCCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 865 5688899999987779999988432 23578999877 58999999999999876
No 64
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=1.9e-31 Score=252.19 Aligned_cols=316 Identities=14% Similarity=0.075 Sum_probs=234.0
Q ss_pred ChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHh----cCC-CCc-eEEecCChhHHHHHHHhccCCCCCeEEEEc
Q 015729 20 IPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIF----KTT-SGT-PFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~----g~~-~~~-~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~ 91 (401)
.++.+.+++.+.... ...+.......++++.+++++ |.+ .++ ++++++|+++|+..++.+++++||+|+++.
T Consensus 39 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~ 118 (376)
T 2dou_A 39 PPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLALTEPEDLLLLPE 118 (376)
T ss_dssp CCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEES
T ss_pred CCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhcCCCCEEEECC
Confidence 567888888775422 122333356778888888887 875 223 599999999999999999899999999999
Q ss_pred CCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCC
Q 015729 92 IGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRH 168 (401)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~ 168 (401)
++|++.. ..++..|++++.++.+.+..+|+++++++++. +++++++++++||||.++| +++|.++|++ +
T Consensus 119 p~y~~~~--~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~--~ 190 (376)
T 2dou_A 119 VAYPSYF--GAARVASLRTFLIPLREDGLADLKAVPEGVWR----EAKVLLLNYPNNPTGAVADWGYFEEALGLARK--H 190 (376)
T ss_dssp SCCHHHH--HHHHHTTCEEEEECBCTTSSBCGGGSCHHHHH----HEEEEEECSSCTTTCCCCCHHHHHHHHHHHHH--T
T ss_pred CCcHhHH--HHHHHcCCEEEEeeCCCCCCCCHHHHHHhhcc----CceEEEECCCCCCcCccCCHHHHHHHHHHHHH--c
Confidence 9887764 45677899999999844446799999998863 5699999999999999987 5678899999 9
Q ss_pred CcEEEEecccccCcc---e---ecc-CcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHH
Q 015729 169 PALFLVDGVSSICAI---D---FRM-DEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKF 240 (401)
Q Consensus 169 ~~~li~D~a~~~~~~---~---~~~-~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
|+++|+|++|+.+.. + .+. ...+.++++.|.+|+++ ++.++|+++.++++.+.+... ..
T Consensus 191 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~-------------~~ 257 (376)
T 2dou_A 191 GLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLERV-------------KG 257 (376)
T ss_dssp TCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECHHHHHHHHHH-------------HH
T ss_pred CCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCHHHHHHHHHH-------------HH
Confidence 999999999986432 1 122 22356899999999984 233479999999987766531 00
Q ss_pred hhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHH
Q 015729 241 YNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSS 320 (401)
Q Consensus 241 ~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (401)
. +..+.+...++++.++++.. ...+++.++++.++++++.+.|++. +.+..+ ..+.++++.+|++.+..
T Consensus 258 ~-----~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~----~~~~~~~~~~~~~~~~~ 326 (376)
T 2dou_A 258 V-----IDFNQYAGVLRMGVEALKTP-KEVVRGYARVYRERALGMAEALKGV-LSLLPP----RATMYLWGRLPEGVDDL 326 (376)
T ss_dssp H-----HCCCSCHHHHHHHHHHHTSC-HHHHHHHHHHHHHHHHHHHHHHTTT-SEECCC----CBSSEEEEECCTTCCHH
T ss_pred h-----cccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHh-cCccCC----CeeEEEEEECCCCCCHH
Confidence 0 11234555555555555532 2346778888889999999999886 554432 24457888887667788
Q ss_pred HHHHHHHhhCCeEEccCCCCC--CCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 321 EIVRRAWQRYNLSLGLGLNKV--AGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 321 ~l~~~L~~~~~i~v~~g~~~~--~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
++.+.|.++ ||.+.+|..+. .++++||++.. +++++++++++|++++
T Consensus 327 ~~~~~l~~~-gi~v~~g~~f~~~~~~~~Ris~~~--~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 327 EFGLRLVER-GVALAPGRGFGPGGKGFVRIALVR--PLEELLEAAKRIREAL 375 (376)
T ss_dssp HHHHHHHHT-TEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHC-CEEEcCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHh
Confidence 999999887 99999885432 25789998765 8999999999998764
No 65
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=100.00 E-value=4.4e-31 Score=252.49 Aligned_cols=331 Identities=11% Similarity=0.088 Sum_probs=243.1
Q ss_pred CCCCCCCcccccCCCcCChHHHHHHHccCcCCCCC----ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHh
Q 015729 3 YMYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDYRS----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT 78 (401)
Q Consensus 3 ~~~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~----~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~ 78 (401)
|.++.++.|+..+++..+.+++.+++.++...... +...+...++++.+++++|.+. .+++++|++|+..++.
T Consensus 61 ~ld~~s~~~l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~---~i~~~sGt~a~~~~l~ 137 (409)
T 3kki_A 61 DIILQSNDYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTGFDE---CLLSQSGWNANVGLLQ 137 (409)
T ss_dssp SEECCCSCTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHTCSE---EEEESCHHHHHHHHHH
T ss_pred eEEeeccCccCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhCCCe---EEEecchHHHHHHHHH
Confidence 45566666665555544444555555443221111 1222456689999999998865 4556777899999999
Q ss_pred ccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHH
Q 015729 79 NTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSK 158 (401)
Q Consensus 79 ~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~ 158 (401)
+++++||.|++..+.|++.. ..++..|++++.++. .|++++++++++. +++++++++++||||.+.|+++
T Consensus 138 ~~~~~gd~Vl~~~~~~~~~~--~~~~~~g~~~~~~~~-----~d~~~le~~l~~~---~~~~vi~~~~~nptG~~~~l~~ 207 (409)
T 3kki_A 138 TICQPNTNVYIDFFAHMSLW--EGARYANAQAHPFMH-----NNCDHLRMLIQRH---GPGIIVVDSIYSTLGTIAPLAE 207 (409)
T ss_dssp HHCCTTCEEEEETTSCHHHH--HHHHHTTCEEEEECT-----TCHHHHHHHHHHH---CSCEEEEESBCTTTCCBCCHHH
T ss_pred HhcCCCCEEEECCCcCHHHH--HHHHHcCCeEEEecC-----CCHHHHHHHHHhc---CCeEEEECCCCCCCCCcCCHHH
Confidence 99999999999999877664 345667888887764 4899999999862 3589999999999999999999
Q ss_pred HHHHhhhcCCCcEEEEecccccCcce---------eccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCc
Q 015729 159 VRKLLDEYRHPALFLVDGVSSICAID---------FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVR 229 (401)
Q Consensus 159 i~~l~~~~~~~~~li~D~a~~~~~~~---------~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~ 229 (401)
|.++|++ +|++||+|++|+.+... .+. ..++|+++.|.+|+++++ | |++++++++.+.+....
T Consensus 208 l~~la~~--~~~~li~De~~~~g~~g~~g~~~~~~~~~-~~~~di~~~s~sK~~~~~-g-g~v~~~~~~~~~~~~~~--- 279 (409)
T 3kki_A 208 LVNISKE--FGCALLVDESHSLGTHGPNGAGLLAELGL-TREVHFMTASLAKTFAYR-A-GAIWCNNEVNRCVPFIS--- 279 (409)
T ss_dssp HHHHHHH--HTCEEEEECTTTTTTSSGGGCCHHHHHTC-GGGCSEEEEESSSTTCSS-C-EEEEESSSGGGTHHHHC---
T ss_pred HHHHHHH--cCCEEEEECCccccccCCCCCcchhhcCC-CCCCCEEEeecchhhCCC-c-eEEEECHHHHHHHHHhC---
Confidence 9999999 99999999999865431 111 135789999999999644 4 99999988765443211
Q ss_pred cccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeE
Q 015729 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVT 309 (401)
Q Consensus 230 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~ 309 (401)
..+. +..+.+...++++.++++.+... ++.++++.++++++.+.|+++|+++.. .+.++
T Consensus 280 ---------~~~~----~~~~~~~~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~------~~~~~ 338 (409)
T 3kki_A 280 ---------YPAI----FSSTLLPYEAAGLETTLEIIESA--DNRRQHLDRMARKLRIGLSQLGLTIRS------ESQII 338 (409)
T ss_dssp ---------HHHH----HSBCCCHHHHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHTTTCCCCC------SSSEE
T ss_pred ---------cCcc----ccCCCcHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCccCC------CCCEE
Confidence 0011 11235667777888888877654 678888999999999999998877652 23467
Q ss_pred EEEcCCCCCHHHHHHHHHhhCCeEEccCCCC---CCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCCC
Q 015729 310 AVIVPSHINSSEIVRRAWQRYNLSLGLGLNK---VAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGYP 376 (401)
Q Consensus 310 ~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~---~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~~ 376 (401)
++.+++..+..++.+.|.++ ||.+.+...+ ...+++||++...++++|+++++++|+++++..++.
T Consensus 339 ~~~~~~~~~~~~~~~~L~~~-Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 407 (409)
T 3kki_A 339 GLETGDERNTEKVRDYLESN-GVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNYGDFY 407 (409)
T ss_dssp EEEEESHHHHHHHHHHHHHT-TEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHSSCC
T ss_pred EEEeCCHHHHHHHHHHHHHC-CceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhcCCCC
Confidence 77775443466789999877 9998776432 234689999888889999999999999999876654
No 66
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=5.6e-31 Score=249.78 Aligned_cols=316 Identities=13% Similarity=0.050 Sum_probs=230.1
Q ss_pred CChHHHHHHHccCcCC-CCCccHHHHHHHHHHHHHHH----hcCC-CCc-eEEecCChhHHHHHHHhccCCCCCeEEEEc
Q 015729 19 HIPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKI----FKTT-SGT-PFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~----~g~~-~~~-~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~ 91 (401)
+.++.+.+++.+.... ...+.......++++.++++ +|.+ .++ ++++++|+++|+..++.+++++||+|+++.
T Consensus 43 ~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~ 122 (386)
T 1u08_A 43 DGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFD 122 (386)
T ss_dssp CCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CCCHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHhCCCCCEEEEeC
Confidence 3567788777764321 11111112234555555555 5753 334 599999999999999998899999999999
Q ss_pred CCcchHHHHHHHHHcCCcEEEEeCCC-CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcC
Q 015729 92 IGQFSLLWIDQQQRLNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYR 167 (401)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~ 167 (401)
++|++.. ..++..|++++.++.+. ++.+|++++++.++ ++++++++++++||||.+.| +++|.++|++
T Consensus 123 p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~----~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~-- 194 (386)
T 1u08_A 123 PSYDSYA--PAIALSGGIVKRMALQPPHFRVDWQEFAALLS----ERTRLVILNTPHNPSATVWQQADFAALWQAIAG-- 194 (386)
T ss_dssp SCCTTHH--HHHHHTTCEEEEEECCTTTCCCCHHHHHHHCC----TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTT--
T ss_pred CCchhHH--HHHHHcCCEEEEeecCcccCcCCHHHHHHhhc----ccCEEEEEeCCCCCCCccCCHHHHHHHHHHHHH--
Confidence 9988764 45677899999999876 46789999999986 36799999999999999986 5788999999
Q ss_pred CCcEEEEecccccCcc------ee-ccC-cccceEEEecCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHH
Q 015729 168 HPALFLVDGVSSICAI------DF-RMD-EWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDY 237 (401)
Q Consensus 168 ~~~~li~D~a~~~~~~------~~-~~~-~~~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (401)
+|+++|+|++|+.+.. ++ ... ..+.|+++.|.||+++ ++| +|++++++++.+.+...
T Consensus 195 ~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~l~~~------------ 261 (386)
T 1u08_A 195 HEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYH-MTGWKVGYCVAPAPISAEIRKV------------ 261 (386)
T ss_dssp SCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTT-CGGGCCEEEECCHHHHHHHHHH------------
T ss_pred cCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcC-CcccceEEEEcCHHHHHHHHHH------------
Confidence 9999999999986321 11 111 2468999999999984 455 79999999887766431
Q ss_pred HHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCC-
Q 015729 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSH- 316 (401)
Q Consensus 238 ~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~- 316 (401)
.... .++.+...+.++.++++.. ..++++.++++.++++++.+.|++.|+++..+ ..+.++++.+++.
T Consensus 262 -~~~~-----~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~g~~~~~~~~~~~ 330 (386)
T 1u08_A 262 -HQYL-----TFSVNTPAQLALADMLRAE-PEHYLALPDFYRQKRDILVNALNESRLEILPC----EGTYFLLVDYSAVS 330 (386)
T ss_dssp -HHHH-----TSSCCHHHHHHHHHHHHHC-THHHHTHHHHHHHHHHHHHHHTTSSSCEECCC----CBSSEEEEECTTTC
T ss_pred -HHhh-----ccCCChHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHHCCCeecCC----CceEEEEEecCCCC
Confidence 0000 2234555555566666543 23467788889999999999998878776543 2345788888653
Q ss_pred -CCHHHHHHHHHhhCCeEEccCCCC----CCCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 317 -INSSEIVRRAWQRYNLSLGLGLNK----VAGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 317 -~~~~~l~~~L~~~~~i~v~~g~~~----~~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
.+..++.+.|.+++||.+.+|... ..++++||++.. +++++++++++|++
T Consensus 331 ~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~--~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 331 TLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAK--KESTLLAAAERLRQ 385 (386)
T ss_dssp CSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCS--CHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcC--CHHHHHHHHHHHhh
Confidence 577889998876669999987432 135689998864 89999999998853
No 67
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=6.5e-31 Score=248.41 Aligned_cols=318 Identities=10% Similarity=0.014 Sum_probs=234.2
Q ss_pred CcCChHHHHHHHccCcCC-CCCccHHHHHHHHHHHHHHHhc------CCCCceEEecCChhHHHHHHHhccCCCCCeEEE
Q 015729 17 PVHIPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIFK------TTSGTPFLIPTTGTGAWESALTNTLSPGDRIIS 89 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~g------~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~ 89 (401)
+.+.++.+++++.+.... ...+.. .. .++++.++++++ .++ +++++++|+++|++.++.+++++||+|++
T Consensus 34 ~~~~~~~v~~a~~~~~~~~~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~-~~i~~t~g~~~a~~~~~~~~~~~gd~vl~ 110 (377)
T 3fdb_A 34 DFSTCPAVLQAITDAVQREAFGYQP-DG-SLLSQATAEFYADRYGYQARP-EWIFPIPDVVRGLYIAIDHFTPAQSKVIV 110 (377)
T ss_dssp CSCCCHHHHHHHHHHHHTTCCSSCC-SS-CCHHHHHHHHHHHHHCCCCCG-GGEEEESCHHHHHHHHHHHHSCTTCCEEE
T ss_pred CCCCCHHHHHHHHHHHHcCCCCCCC-CC-HHHHHHHHHHHHHHhCCCCCH-HHEEEeCChHHHHHHHHHHhcCCCCEEEE
Confidence 456778888888764432 111221 22 567777777776 444 45999999999999999999999999999
Q ss_pred EcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhc
Q 015729 90 FLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEY 166 (401)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~ 166 (401)
..++|++.. ..++..|++++.++.+.+ +|++++++++++ +++++++++++||||.+.| +++|.++|++
T Consensus 111 ~~~~~~~~~--~~~~~~g~~~~~~~~~~~--~d~~~l~~~l~~----~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~- 181 (377)
T 3fdb_A 111 PTPAYPPFF--HLLSATQREGIFIDATGG--INLHDVEKGFQA----GARSILLCNPYNPLGMVFAPEWLNELCDLAHR- 181 (377)
T ss_dssp EESCCTHHH--HHHHHHTCCEEEEECTTS--CCHHHHHHHHHT----TCCEEEEESSBTTTTBCCCHHHHHHHHHHHHH-
T ss_pred cCCCcHhHH--HHHHHcCCEEEEccCCCC--CCHHHHHHHhcc----CCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHH-
Confidence 999988764 557778999999999877 899999999985 4689999999999999986 5567777999
Q ss_pred CCCcEEEEecccccCcce-----eccC---cccceEEEecCCCccc-CCCcceEEEe-cHHHHHHhccCCCCccccchHH
Q 015729 167 RHPALFLVDGVSSICAID-----FRMD---EWGIDVALTGSQKALS-LPTGMGIVCA-SPKALEASKTAKSVRVFFDWKD 236 (401)
Q Consensus 167 ~~~~~li~D~a~~~~~~~-----~~~~---~~~~di~~~s~~K~l~-g~~g~G~l~~-~~~~~~~~~~~~~~~~~~~~~~ 236 (401)
+|+++|+|++|+.+... .++. ..+.++++.|.+|+++ ++.++|++++ ++++.+.+.....
T Consensus 182 -~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~--------- 251 (377)
T 3fdb_A 182 -YDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLSP--------- 251 (377)
T ss_dssp -TTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHSCH---------
T ss_pred -cCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHHHHH---------
Confidence 99999999999863221 1221 2346689999999983 2344787776 6777776654210
Q ss_pred HHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEEEcC
Q 015729 237 YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVP 314 (401)
Q Consensus 237 ~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~ 314 (401)
...++++...++++.++++.. ...+++.++++.++++++.+.|++. |+++..+. .+.++++.++
T Consensus 252 ---------~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----~~~~~~~~~~ 317 (377)
T 3fdb_A 252 ---------VIKDGASTLGLIAAEAAYRYG-TDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQ----ATYLMWIDFR 317 (377)
T ss_dssp ---------HHHCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCS----BCSEEEEECT
T ss_pred ---------hhcCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCC----eeEEEEEECc
Confidence 012246666666666666542 2336788899999999999999984 88776542 3456678886
Q ss_pred CC-CCHHHHHHHHHhhCCeEEccCCCCC--CCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 315 SH-INSSEIVRRAWQRYNLSLGLGLNKV--AGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 315 ~~-~~~~~l~~~L~~~~~i~v~~g~~~~--~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.. .+ .++...|.+++||.+.+|..+. .++++||++.. +++++++++++|+++++++
T Consensus 318 ~~~~~-~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~--~~e~i~~~l~~l~~~l~~~ 376 (377)
T 3fdb_A 318 DTTIE-GSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFAT--SREVLEEAIDRMAKAVSHH 376 (377)
T ss_dssp TSCCC-SCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHTTC
T ss_pred ccCCC-HHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCC--CHHHHHHHHHHHHHHHhhc
Confidence 52 33 5677777766699999885432 35789998774 8999999999999998653
No 68
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.1e-31 Score=254.83 Aligned_cols=320 Identities=13% Similarity=0.090 Sum_probs=231.3
Q ss_pred CChHHHHHHHccCcCC-CCCccHHHHHHHHHHHHHHHh----cCC-CCc-eEEecCChhHHHHHHHhccCCCCCeEEEEc
Q 015729 19 HIPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIF----KTT-SGT-PFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~----g~~-~~~-~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~ 91 (401)
+.++.+.+++.+.... ...+.......++++.+++++ |.+ .++ ++++++|+++|+..++.+++++||+|+++.
T Consensus 38 ~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~ 117 (411)
T 2o0r_A 38 DGPPKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIE 117 (411)
T ss_dssp CCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeC
Confidence 4567777777764322 111221122345566665554 653 233 599999999999999988899999999999
Q ss_pred CCcchHHHHHHHHHcCCcEEEEeCCCC---CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhh
Q 015729 92 IGQFSLLWIDQQQRLNFNVDVVESDWG---EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDE 165 (401)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~~---~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~ 165 (401)
++|++.. ..++..|++++.++.+.+ +.+|+++++++++ ++++++++++++||||.+.| +++|.++|++
T Consensus 118 ~~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~----~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~ 191 (411)
T 2o0r_A 118 PFYDSYS--PVVAMAGAHRVTVPLVPDGRGFALDADALRRAVT----PRTRALIINSPHNPTGAVLSATELAAIAEIAVA 191 (411)
T ss_dssp SCCTTHH--HHHHHTTCEEEEEECEEETTEEECCHHHHHHHCC----TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CCcHhHH--HHHHHcCCEEEEeeccccccCCCCCHHHHHHhhc----cCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 9988764 456778999999998653 4589999999986 36799999999999999987 4889999999
Q ss_pred cCCCcEEEEecccccCcce----ec---cC-cccceEEEecCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchH
Q 015729 166 YRHPALFLVDGVSSICAID----FR---MD-EWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWK 235 (401)
Q Consensus 166 ~~~~~~li~D~a~~~~~~~----~~---~~-~~~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~ 235 (401)
+|+++|+|++|+.+... .. .. ..+.|+++.|.+|+++ ++| +|++++++++.+.+...
T Consensus 192 --~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~l~~~---------- 258 (411)
T 2o0r_A 192 --ANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFN-CTGWKIGWACGPAELIAGVRAA---------- 258 (411)
T ss_dssp --TTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTT-CTTTCEEEEECCHHHHHHHHHH----------
T ss_pred --cCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcC-CccceEEEEeeCHHHHHHHHHH----------
Confidence 99999999999865321 11 11 1468999999999884 555 79999999887766431
Q ss_pred HHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCC
Q 015729 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS 315 (401)
Q Consensus 236 ~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 315 (401)
.... .++.+...++++.++++.. ..++++.++++.++++++.+.|++.|+++..+ ..+.++++.+++
T Consensus 259 ---~~~~-----~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~g~~~~~~~~~ 325 (411)
T 2o0r_A 259 ---KQYL-----SYVGGAPFQPAVALALDTE-DAWVAALRNSLRARRDRLAAGLTEIGFAVHDS----YGTYFLCADPRP 325 (411)
T ss_dssp ---HHHH-----TSCCCTTHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHTCEECCC----CBSSEEEEECGG
T ss_pred ---Hhhc-----cCCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHcCCEecCC----CeeEEEEEecCC
Confidence 0111 1123333345556666543 33467788899999999999999888776543 234578888864
Q ss_pred --CCCHHHHHHHHHhhCCeEEccCCCC--C-----------CCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 316 --HINSSEIVRRAWQRYNLSLGLGLNK--V-----------AGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 316 --~~~~~~l~~~L~~~~~i~v~~g~~~--~-----------~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
+.+..++.+.|.++.||.+.+|... . .++++||++.. +++|+++++++|++++++
T Consensus 326 ~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~--~~e~i~~~~~~l~~~~~~ 395 (411)
T 2o0r_A 326 LGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCK--RDDTLDEAIRRLSVLAER 395 (411)
T ss_dssp GTCCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECCS--CHHHHHHHHHHHGGGGC-
T ss_pred CCCCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEecC--CHHHHHHHHHHHHHHHhc
Confidence 2567889888875559999887432 1 24679998754 899999999999987654
No 69
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=3.1e-31 Score=255.17 Aligned_cols=320 Identities=12% Similarity=0.045 Sum_probs=233.4
Q ss_pred CChHHHHHHHccCcCC----CCCccHHHHHHHHHHHHHHHh----cCC-CCc-eEEecCChhHHHHHHHhccCCCCCeEE
Q 015729 19 HIPDQVIRAMNRNNED----YRSPAVPALTKTLLEDIKKIF----KTT-SGT-PFLIPTTGTGAWESALTNTLSPGDRII 88 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~----g~~-~~~-~i~~~~g~t~a~~~~~~~~~~~gd~vl 88 (401)
+.++.+++++.+.... ...+.......++++.+++++ |.+ .++ ++++++|+++|+..++.+++++||+|+
T Consensus 50 ~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl 129 (429)
T 1yiz_A 50 HAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVI 129 (429)
T ss_dssp CCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEE
T ss_pred CCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHhcCCCCEEE
Confidence 4567788777764322 111111122345556665554 753 334 599999999999999998899999999
Q ss_pred EEcCCcchHHHHHHHHHcCCcEEEEeCCCC----------CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---
Q 015729 89 SFLIGQFSLLWIDQQQRLNFNVDVVESDWG----------EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN--- 155 (401)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~----------~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~--- 155 (401)
++.++|++.. ..++..|++++.++.+.+ +.+|++++++.++ ++++++++++++||||.+.+
T Consensus 130 ~~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~v~~~~p~nptG~~~~~~~ 203 (429)
T 1yiz_A 130 IIEPFFDCYE--PMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFN----EKTKMIIINTPHNPLGKVMDRAE 203 (429)
T ss_dssp EEESCCTTHH--HHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCC----TTEEEEEEESSCTTTCCCCCHHH
T ss_pred EcCCCchhHH--HHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhc----cCceEEEECCCCCCCCccCCHHH
Confidence 9999888765 456778999999998763 4689999999986 36799999999999999985
Q ss_pred hHHHHHHhhhcCCCcEEEEecccccCcc------ee-ccC-cccceEEEecCCCcccCCCc--ceEEEecHHHHHHhccC
Q 015729 156 LSKVRKLLDEYRHPALFLVDGVSSICAI------DF-RMD-EWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTA 225 (401)
Q Consensus 156 l~~i~~l~~~~~~~~~li~D~a~~~~~~------~~-~~~-~~~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~ 225 (401)
+++|.++|++ +|+++|+|++|+.+.. ++ ... ..+.|+++.|.+|+++ ++| +|++++++++.+.+...
T Consensus 204 l~~i~~~~~~--~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~-~~G~r~G~~~~~~~~~~~l~~~ 280 (429)
T 1yiz_A 204 LEVVANLCKK--WNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFS-LTGWKIGWAYGPEALLKNLQMV 280 (429)
T ss_dssp HHHHHHHHHH--HTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHT-CGGGCCEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHH--cCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccC-CCCcceEEEEeCHHHHHHHHHH
Confidence 8889999999 9999999999985321 12 121 3578999999999884 455 79999999887766431
Q ss_pred CCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHH-----HH-HhcHHHHHHHHHHHHHHHHHHHHHcCCccccC
Q 015729 226 KSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDL-----IF-EEGLENVIERHRRLGKATRLAVEAWGLKNCTQ 299 (401)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~-----~~-~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 299 (401)
.. ...++.+...++++.++++. .. ...+++.+++++++++++.+.|++.|+.+..+
T Consensus 281 -------------~~-----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 342 (429)
T 1yiz_A 281 -------------HQ-----NCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVP 342 (429)
T ss_dssp -------------HH-----TTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHHTCEEEEC
T ss_pred -------------Hh-----hcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC
Confidence 00 11234556556666666665 21 22367888889999999999999888776543
Q ss_pred CCccCCceeEEEEcCCC------------CCHHHHHHHHHhhCCeEEccCCCCC-------CCcEEEEeecccCCHHHHH
Q 015729 300 KEEWFSDTVTAVIVPSH------------INSSEIVRRAWQRYNLSLGLGLNKV-------AGKVFRIGHLGHLNELQLL 360 (401)
Q Consensus 300 ~~~~~~~~~~~~~~~~~------------~~~~~l~~~L~~~~~i~v~~g~~~~-------~~~~~Ri~~~~~~~~~di~ 360 (401)
..+.++++.+++. .+..++.+.|.+++||.+.+|.... .++++||++.. ++++++
T Consensus 343 ----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~--~~e~i~ 416 (429)
T 1yiz_A 343 ----QGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFK--KDENLQ 416 (429)
T ss_dssp ----SBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCS--CHHHHH
T ss_pred ----CcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecC--CHHHHH
Confidence 2345788888643 3456788888755599999874322 15789998864 899999
Q ss_pred HHHHHHHHHHH
Q 015729 361 GCLAGVEMILK 371 (401)
Q Consensus 361 ~~~~~i~~~l~ 371 (401)
+++++|+++++
T Consensus 417 ~~l~~l~~~l~ 427 (429)
T 1yiz_A 417 KAAEILRKWKG 427 (429)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHHhcc
Confidence 99999998764
No 70
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=100.00 E-value=7.8e-31 Score=248.58 Aligned_cols=314 Identities=14% Similarity=0.122 Sum_probs=233.9
Q ss_pred CChHHHHHHHccCcCC-------C-CCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEE
Q 015729 19 HIPDQVIRAMNRNNED-------Y-RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~-------~-~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 90 (401)
+.++.+.+++.+.... . ..........++++.+++++|.+ + .+++++|++|+..++.+++++||.|++.
T Consensus 53 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~-~i~~~sGt~a~~~~~~~~~~~gd~v~~~ 129 (384)
T 1bs0_A 53 SHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYS--R-ALLFISGFAANQAVIAAMMAKEDRIAAD 129 (384)
T ss_dssp GGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCS--E-EEEESCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCC--c-EEEeCCcHHHHHHHHHHhCCCCcEEEEc
Confidence 4567777777663211 1 11123467889999999999985 3 5666667999999998889999999999
Q ss_pred cCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCc
Q 015729 91 LIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPA 170 (401)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~ 170 (401)
.+.|.+.. ..++..|++++.++. .|++++++.+++.. .+++++++++++||||.+.|+++|.++|++ +|+
T Consensus 130 ~~~~~~~~--~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~l~~~--~~~ 199 (384)
T 1bs0_A 130 RLSHASLL--EAASLSPSQLRRFAH-----NDVTHLARLLASPC-PGQQMVVTEGVFSMDGDSAPLAEIQQVTQQ--HNG 199 (384)
T ss_dssp TTCCHHHH--HHHHTSSSEEEEECT-----TCHHHHHHHHHSCC-SSCEEEEEESBCTTTCCBCCHHHHHHHHHH--TTC
T ss_pred ccccHHHH--HHHHHcCCCEEEeCC-----CCHHHHHHHHHhcC-CCCeEEEEeCCCCCCCCccCHHHHHHHHHH--cCc
Confidence 88766543 456678999988874 38999999998643 236888999999999999999999999999 999
Q ss_pred EEEEecccccCcce------eccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcC
Q 015729 171 LFLVDGVSSICAID------FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLG 244 (401)
Q Consensus 171 ~li~D~a~~~~~~~------~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 244 (401)
++|+|++|+.+... .+....++|++++|.||+++ ++| |++++++++.+.+.... ..+..
T Consensus 200 ~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~G-G~~~~~~~~~~~l~~~~------------~~~~~- 264 (384)
T 1bs0_A 200 WLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFG-VSG-AAVLCSSTVADYLLQFA------------RHLIY- 264 (384)
T ss_dssp EEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTS-SCC-EEEEECHHHHHHHHHHC------------HHHHS-
T ss_pred EEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhh-ccC-cEEEeCHHHHHHHHHhc------------hhhhc-
Confidence 99999999865421 11112357999999999985 777 99999998877664311 00111
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHH
Q 015729 245 TFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVR 324 (401)
Q Consensus 245 ~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 324 (401)
..+++...++++.++++.+.+.+.++..++++++++++.+.|+++|+++... .+.++++.++++.+..++.+
T Consensus 265 ---~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-----~~~~~~~~~~~~~~~~~l~~ 336 (384)
T 1bs0_A 265 ---STSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADS-----CSAIQPLIVGDNSRALQLAE 336 (384)
T ss_dssp ---SBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSSCEECSC-----CSSBCCEEEESHHHHHHHHH
T ss_pred ---CCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcCCcccCC-----CCCEEEEEeCCHHHHHHHHH
Confidence 1246777777778888876532346788899999999999999888766531 22355567654445778999
Q ss_pred HHHhhCCeEEccCCCCC---CCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 325 RAWQRYNLSLGLGLNKV---AGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 325 ~L~~~~~i~v~~g~~~~---~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
.|.++ ||.+.++..+. ..+++||++...++++|+++++++|+++
T Consensus 337 ~l~~~-gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 337 KLRQQ-GCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp HHHHT-TEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHC-CcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 99877 99999885432 2468999988888999999999999764
No 71
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=1.7e-30 Score=246.00 Aligned_cols=322 Identities=9% Similarity=0.016 Sum_probs=237.4
Q ss_pred CcCChHHHHHHHccCcCC---CCCccHHHHHHHHHHHHHHHhcCC-CCceEEecCChhHHHHHHHhccCCCCCeEEEEcC
Q 015729 17 PVHIPDQVIRAMNRNNED---YRSPAVPALTKTLLEDIKKIFKTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~ 92 (401)
+.+.++.+.+++.+.... .+.....+...++.+.+++.+|.+ .++.+++++|+++|++.++.+++++||+|+++.+
T Consensus 35 ~~~~~~~v~~a~~~~~~~~~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~ 114 (383)
T 3kax_A 35 DFEVPQPIQTALKKRIEHPIFGYTLPPENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFTKENESVLVQPP 114 (383)
T ss_dssp SSCCCHHHHHHHHHHHHSCCCCCCCCCTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHCCTTCEEEECSS
T ss_pred CCCCCHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 455678888888764322 222224567778888888888843 3345999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHcCCcEEEEeCCCCC---CCChHHHHHHHhccCCCCceEEEEEecCCCcccccch---HHHHHHhhhc
Q 015729 93 GQFSLLWIDQQQRLNFNVDVVESDWGE---GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL---SKVRKLLDEY 166 (401)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~~~---~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l---~~i~~l~~~~ 166 (401)
+|++.. ..++..|++++.++.+.+. .+|+++++++++ ++++++++++++||||.+.|. ++|.++|++
T Consensus 115 ~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~- 187 (383)
T 3kax_A 115 IYPPFF--EMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQ----QGVKLMLLCSPHNPIGRVWKKEELTKLGSLCTK- 187 (383)
T ss_dssp CCHHHH--HHHHHTTCEEEECCCEEETTEEECCHHHHHHHHT----TTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHH-
T ss_pred CcHHHH--HHHHHcCCEEEeccceecCCcEEEcHHHHHHHhC----cCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHH-
Confidence 888764 5577889999999886533 389999999995 467999999999999999875 556666999
Q ss_pred CCCcEEEEecccccCcc----eeccCc-----ccceEEEecCCCccc-CCCcceEEEe-cHHHHHHhccCCCCccccchH
Q 015729 167 RHPALFLVDGVSSICAI----DFRMDE-----WGIDVALTGSQKALS-LPTGMGIVCA-SPKALEASKTAKSVRVFFDWK 235 (401)
Q Consensus 167 ~~~~~li~D~a~~~~~~----~~~~~~-----~~~di~~~s~~K~l~-g~~g~G~l~~-~~~~~~~~~~~~~~~~~~~~~ 235 (401)
+|+++|+|++|+.+.. ...... .+.++++.|.+|+++ ++.++|++++ ++++.+.+....
T Consensus 188 -~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~--------- 257 (383)
T 3kax_A 188 -YNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQ--------- 257 (383)
T ss_dssp -HTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHH---------
T ss_pred -CCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHHHHHHHHHH---------
Confidence 9999999999986432 111111 245689999999985 3445799988 677766554310
Q ss_pred HHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEEEc
Q 015729 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIV 313 (401)
Q Consensus 236 ~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~ 313 (401)
... ..++++...++++.++++.. ...+++.+++++++++++.+.|++. |+++..+. .+.++++.+
T Consensus 258 ------~~~--~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~----~~~~~~~~~ 324 (383)
T 3kax_A 258 ------YRQ--GFHGLNIFAYTAMQSAYTEC-NDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMKPE----GSFLLWIDC 324 (383)
T ss_dssp ------HHT--TCCCCCHHHHHHHHHHTTTC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCS----BSSEEEEEC
T ss_pred ------hhc--ccCCCCHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCC----ceEEEEEEc
Confidence 001 02246666666666666542 2236778888999999999999984 88776542 345666887
Q ss_pred CC-CCCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 314 PS-HINSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 314 ~~-~~~~~~l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
+. +.+..++.+.|.+++||.+.+|..+ ..++++|+++.. +++++++++++|++++
T Consensus 325 ~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~--~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 325 SALNLSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIGC--PRSVLEEILNRLRHTF 382 (383)
T ss_dssp GGGCCCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECSS--CHHHHHHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEcC--CHHHHHHHHHHHHHHh
Confidence 64 4688899999986569999988433 235789998774 8999999999998875
No 72
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.98 E-value=1.2e-30 Score=252.03 Aligned_cols=323 Identities=16% Similarity=0.126 Sum_probs=234.3
Q ss_pred ChHHHHHHHccCcCCC----CCccHHHHHHHHHHHHHHHh----cCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEc
Q 015729 20 IPDQVIRAMNRNNEDY----RSPAVPALTKTLLEDIKKIF----KTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~~----~~~~~~~~~~~l~~~la~~~----g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~ 91 (401)
.++.+.+++.+..... ..+.......++++.+++++ |.+.++++++++|+++|+..++.+++++||+|++..
T Consensus 92 p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~ 171 (448)
T 3aow_A 92 PKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEA 171 (448)
T ss_dssp CHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeC
Confidence 5666777666533210 11222233457777777777 873334699999999999999999999999999999
Q ss_pred CCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHh----ccCCCCceEE-EEEecCCCcccccc---hHHHHHHh
Q 015729 92 IGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLA----ADTAHTIKAI-CIVHNETATGVTNN---LSKVRKLL 163 (401)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~----~~~~~~~~~i-~~~~~~n~tG~~~~---l~~i~~l~ 163 (401)
++|++.. ..++..|++++.++.+.++ +|+++|+++++ +. .+++++ ++++++||||.+++ +++|.++|
T Consensus 172 p~y~~~~--~~~~~~g~~~~~v~~~~~g-~d~~~L~~~l~~~~~~~--~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la 246 (448)
T 3aow_A 172 PTYLAAL--QAFNFYEPQYIQIPLDDEG-MKVEILEEKLKELKSQG--KKVKVVYTVPTFQNPAGVTMNEDRRKYLLELA 246 (448)
T ss_dssp SCCHHHH--HHHHTTCCEEEEEEEETTE-ECHHHHHHHHHHHHHTT--CCEEEEEECCSSCTTTCCCCCHHHHHHHHHHH
T ss_pred CChHHHH--HHHHHcCCEEEEeccCCCC-CCHHHHHHHHhhhhccC--CCCeEEEECCCCCCCcCCCCCHHHHHHHHHHH
Confidence 9887754 4567789999999987654 89999999987 31 257887 46788999999987 46799999
Q ss_pred hhcCCCcEEEEecccccCcce-------eccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHH
Q 015729 164 DEYRHPALFLVDGVSSICAID-------FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKD 236 (401)
Q Consensus 164 ~~~~~~~~li~D~a~~~~~~~-------~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 236 (401)
++ +|++||+|++|+.+... ...+..+.++++.|.+|+++.+.++|++++++++.+.+....
T Consensus 247 ~~--~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~~GlriG~v~~~~~l~~~l~~~~---------- 314 (448)
T 3aow_A 247 SE--YDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILAPGFRIGWMVGDPGIIRKMEIAK---------- 314 (448)
T ss_dssp HH--HTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTCGGGCCEEEEECHHHHHHHHHHH----------
T ss_pred HH--cCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhccccccEEEEEeCHHHHHHHHHHH----------
Confidence 99 99999999999865321 122233568899999999953334799999999877665320
Q ss_pred HHHHhhcCCCCCCCCcHHHHHHHHHHHHHH-HHhcHHHHHHHHHHHHHHHHHHHHHc---CCccccCCCccCCceeEEEE
Q 015729 237 YIKFYNLGTFWPYTPSIQLLYGLRAALDLI-FEEGLENVIERHRRLGKATRLAVEAW---GLKNCTQKEEWFSDTVTAVI 312 (401)
Q Consensus 237 ~~~~~~~g~~~~~~~~~~~~~a~~~al~~~-~~~g~~~~~~~~~~~~~~l~~~L~~~---g~~~~~~~~~~~~~~~~~~~ 312 (401)
... ..+++...+.++.++++.. ....+++.++++.++++.+.+.|++. |+.+..+ ..+.++++.
T Consensus 315 --~~~------~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p----~~g~~~~v~ 382 (448)
T 3aow_A 315 --QST------DLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKP----EGGMFIWVT 382 (448)
T ss_dssp --HHH------HSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCC----SBSSEEEEE
T ss_pred --HHh------cCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEeCC----CccEEEEEE
Confidence 000 1124555455555555431 12236677888889999999999874 6766543 234678899
Q ss_pred cCCCCCHHHHHHHHHhhCCeEEccCCCC----CCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 313 VPSHINSSEIVRRAWQRYNLSLGLGLNK----VAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 313 ~~~~~~~~~l~~~L~~~~~i~v~~g~~~----~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+|++.+..++.+.|.++ ||.+.+|... ...+++|+++.. .+++++++++++|++++++.
T Consensus 383 ~~~~~~~~~l~~~l~~~-gV~v~pg~~f~~~~~~~~~iRls~~~-~~~e~i~~~~~~L~~~l~~~ 445 (448)
T 3aow_A 383 LPDGIDSKKMLERAIKK-GVAYVPGEAFYAHRDVKNTMRLNFTY-VDEDKIMEGIKRLAETIKEE 445 (448)
T ss_dssp CSTTCCHHHHHHHHHHT-TEECEEGGGGSTTCCCCSEEEEECSS-SCTHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHC-CcEEEcchhhcCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHHHHHHH
Confidence 98777888999999887 9999988432 135789998665 58999999999999988653
No 73
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.98 E-value=4.1e-30 Score=242.40 Aligned_cols=311 Identities=12% Similarity=0.076 Sum_probs=232.1
Q ss_pred CcCChHHHHHHHccCcCC----CCCccHHHHHHHHHHHHHHH----hcCC-CCceEEecCChhHHHHHHHhccCCCCCeE
Q 015729 17 PVHIPDQVIRAMNRNNED----YRSPAVPALTKTLLEDIKKI----FKTT-SGTPFLIPTTGTGAWESALTNTLSPGDRI 87 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~----~g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~v 87 (401)
|.+.++.+.+++.+.... ...+.... ..++++.++++ +|.. .++.+++++|+++|+..++.+++++||+|
T Consensus 41 ~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~-~~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~l~~~gd~V 119 (369)
T 3cq5_A 41 PYPPSEALVADLVATVDKIATELNRYPERD-AVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTA 119 (369)
T ss_dssp CSCCCHHHHHHHHHHHHHHGGGTTSCCCTT-CHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCSTTCEE
T ss_pred CCCCCHHHHHHHHHHHHhcccccccCCCcc-HHHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHHhcCCCCEE
Confidence 445677888877664311 11111111 24677777777 3332 23459999999999999998889999999
Q ss_pred EEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcC
Q 015729 88 ISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYR 167 (401)
Q Consensus 88 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~ 167 (401)
+++.++|++.. ..++..|++++.++.+.++.+|++++++++++ .+++++++++++||||.+.|++++.++|+.
T Consensus 120 l~~~~~y~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~v~~~~~~nptG~~~~~~~l~~l~~~-- 192 (369)
T 3cq5_A 120 LGFQPSYSMHP--ILAKGTHTEFIAVSRGADFRIDMDVALEEIRA---KQPDIVFVTTPNNPTGDVTSLDDVERIINV-- 192 (369)
T ss_dssp EEEESSCTHHH--HHHHHTTCEEEEEECCTTSSCCHHHHHHHHHH---HCCSEEEEESSCTTTCCCCCHHHHHHHHHH--
T ss_pred EEcCCChHHHH--HHHHHcCCEEEEecCCcCCCCCHHHHHHHhhc---cCCCEEEEeCCCCCCCCCCCHHHHHHHHHh--
Confidence 99999988764 45677899999999887778899999999975 146899999999999999999999999999
Q ss_pred CCcEEEEecccccCcce---ecc-Cccc-ceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHh
Q 015729 168 HPALFLVDGVSSICAID---FRM-DEWG-IDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFY 241 (401)
Q Consensus 168 ~~~~li~D~a~~~~~~~---~~~-~~~~-~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (401)
+++++|+|++|+.+... ... +..+ .++++.|.||+++ ++.++|++++++++.+.+.....
T Consensus 193 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~-------------- 258 (369)
T 3cq5_A 193 APGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRL-------------- 258 (369)
T ss_dssp CSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHHHHHHHTTSC--------------
T ss_pred CCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHHHHHHHHHcCC--------------
Confidence 88999999999866532 222 2345 6799999999985 22346999999988777654311
Q ss_pred hcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHH
Q 015729 242 NLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSE 321 (401)
Q Consensus 242 ~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (401)
.++++...++++.++++. ...+++.++++.++++++.+.|++.|+++... .+.++++.++ .+..+
T Consensus 259 ------~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-----~~~~~~~~~~--~~~~~ 323 (369)
T 3cq5_A 259 ------PYHLSALSQAAAIVALRH--SADTLGTVEKLSVERVRVAARLEELGYAVVPS-----ESNFVFFGDF--SDQHA 323 (369)
T ss_dssp ------TTCSCHHHHHHHHHHHHT--HHHHHTHHHHHHHHHHHHHHHHHHHTCEEECC-----SSSEEEEECC--SSHHH
T ss_pred ------CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCEECCC-----CCeEEEEECC--CCHHH
Confidence 123566656666666653 22367788889999999999998888776532 2246777875 46788
Q ss_pred HHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 322 IVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 322 l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
+.+.|.++ ||.+.++. .++++||++. +++|+++++++|+++++
T Consensus 324 l~~~l~~~-gi~v~~~~---~~~~iRis~~---~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 324 AWQAFLDR-GVLIRDVG---IAGHLRTTIG---VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp HHHHHHHT-TEECBCCS---CTTEEEEECC---CHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHC-CEEEEECC---CCCeEEEEeC---CHHHHHHHHHHHHHHHh
Confidence 99999755 99998872 2578999865 78999999999998864
No 74
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.98 E-value=2.1e-30 Score=250.87 Aligned_cols=339 Identities=9% Similarity=-0.045 Sum_probs=245.6
Q ss_pred cCChHHHHHHHccCcCC-----CCCccHHHHHHHHHHHHHHHhcCCCCc----eEEecCChhHHHHHHHhccCC------
Q 015729 18 VHIPDQVIRAMNRNNED-----YRSPAVPALTKTLLEDIKKIFKTTSGT----PFLIPTTGTGAWESALTNTLS------ 82 (401)
Q Consensus 18 ~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~~----~i~~~~g~t~a~~~~~~~~~~------ 82 (401)
++.++.+.+++...... ..++...+...++++.+++++|.+... .+++++|||+|+..++.++..
T Consensus 52 ~~~~~~v~e~~~~a~~~~~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~ 131 (452)
T 2dgk_A 52 TWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRM 131 (452)
T ss_dssp CCCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHhccCCCChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHH
Confidence 44557788888764421 123445567889999999999997643 489999999999988866542
Q ss_pred --CC-----CeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCC-CCCCChHHHHHHHhccCCCCceEEEEEecCCCccccc
Q 015729 83 --PG-----DRIISFLIGQFSLLWIDQQQRLNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN 154 (401)
Q Consensus 83 --~g-----d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~ 154 (401)
+| ++|+++. .|+++ ...++..|++++.+++++ ++.+|++++++++++ ++++|++++++|+||.+.
T Consensus 132 ~~~G~~~~~~~vi~~~-~h~~~--~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~----~t~~v~~~~~~n~tG~~~ 204 (452)
T 2dgk_A 132 EAAGKPTDKPNLVCGP-VQICW--HKFARYWDVELREIPMRPGQLFMDPKRMIEACDE----NTIGVVPTFGVTYTGNYE 204 (452)
T ss_dssp HHTTCCCSCCEEEESS-CCHHH--HHHHHHTTCEEEECCCBTTBCSCCHHHHHHHCCT----TEEEEECBBSCTTTCBBC
T ss_pred HhcCCCCCCcEEEECC-CcHHH--HHHHHHcCceEEEEecCCCCCeECHHHHHHHHhh----CCEEEEEEcCCcCCcccC
Confidence 44 5888887 66544 466788999999999886 678999999999974 568999999999999999
Q ss_pred chHHHHHHhhhc----CCCcEEEEecccccCcce-------eccCcccceEEEecCCCcccCCCcceEEEecHH-HH-HH
Q 015729 155 NLSKVRKLLDEY----RHPALFLVDGVSSICAID-------FRMDEWGIDVALTGSQKALSLPTGMGIVCASPK-AL-EA 221 (401)
Q Consensus 155 ~l~~i~~l~~~~----~~~~~li~D~a~~~~~~~-------~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~-~~-~~ 221 (401)
|+++|.++|+++ ++|+++|+|++|+.+..+ .+....++|++++++||++.++.++|+++++++ .+ +.
T Consensus 205 ~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~~~~ 284 (452)
T 2dgk_A 205 FPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQE 284 (452)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGG
T ss_pred CHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECcccccCCCCCeEEEEEcCHHHHHHH
Confidence 999999999993 239999999999876432 233344799999999999888899999999754 32 32
Q ss_pred hccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCC
Q 015729 222 SKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQK 300 (401)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 300 (401)
+... .. +.. .... .....++.+....+++.+++..+..+++++..++..++++++.+.|+++ ++++..+.
T Consensus 285 ~~~~-~~--~~~-----~~~~-~~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 355 (452)
T 2dgk_A 285 LVFN-VD--YLG-----GQIG-TFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTG 355 (452)
T ss_dssp GCEE-EC--CTT-----CCEE-ECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEEC
T ss_pred hccC-cc--ccC-----CCCC-CcccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCC
Confidence 2110 00 100 0000 0001223444456777888887777788999999999999999999998 57776431
Q ss_pred CccCCceeEEEEcCCC----CCHHHHHHHHHhhCCeEEccCCCC---CCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 301 EEWFSDTVTAVIVPSH----INSSEIVRRAWQRYNLSLGLGLNK---VAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 301 ~~~~~~~~~~~~~~~~----~~~~~l~~~L~~~~~i~v~~g~~~---~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.......++.|.++.. .+..++.+.|.++ ||.++....+ ....++|+++...+|++|+|++++.|+++++++
T Consensus 356 ~~~~~~~~v~f~~~~~~~~~~~~~~l~~~L~~~-Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~~~~~ 434 (452)
T 2dgk_A 356 RPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLR-GWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYL 434 (452)
T ss_dssp CTTTBSSEEEEEECTTCCCSCCHHHHHHHHHHT-TCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEEEecCcccccCCHHHHHHHHHhc-CCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 1001224667777532 3557899999876 8865432211 124579999988889999999999999988765
No 75
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.98 E-value=1e-30 Score=249.66 Aligned_cols=323 Identities=15% Similarity=0.133 Sum_probs=235.9
Q ss_pred ChHHHHHHHccCcCC----CCCccHHHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHhccCCCCCeEEEE
Q 015729 20 IPDQVIRAMNRNNED----YRSPAVPALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~----g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 90 (401)
.++.+.+++.+.... .. +.......++++.+++++ |.+ .++++++++|+++|+..++.+++++||+|+++
T Consensus 50 ~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~ 128 (407)
T 2zc0_A 50 PRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITE 128 (407)
T ss_dssp CHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEe
Confidence 556777776653221 11 222233567888888877 742 33559999999999999999989999999999
Q ss_pred cCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHh----ccCCCCceEE-EEEecCCCcccccchH---HHHHH
Q 015729 91 LIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLA----ADTAHTIKAI-CIVHNETATGVTNNLS---KVRKL 162 (401)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~----~~~~~~~~~i-~~~~~~n~tG~~~~l~---~i~~l 162 (401)
.++|++.. ..++..|++++.++.+.++ +|+++++++++ +. .++++| ++++++||||.+.|.+ +|.++
T Consensus 129 ~p~~~~~~--~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~--~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~ 203 (407)
T 2zc0_A 129 NPSYINTL--LAFEQLGAKIEGVPVDNDG-MRVDLLEEKIKELKAKG--QKVKLIYTIPTGQNPMGVTMSMERRKALLEI 203 (407)
T ss_dssp ESCCHHHH--HHHHTTTCEEEEEEEETTE-ECHHHHHHHHHHHHHTT--CCEEEEEECCSSCTTTCCCCCHHHHHHHHHH
T ss_pred CCChHHHH--HHHHHcCCEEEEcccCCCC-CCHHHHHHHHHhhhccc--CCceEEEECCCCCCCCCcCCCHHHHHHHHHH
Confidence 99887754 4567789999999987654 89999999987 31 256887 4678899999999876 89999
Q ss_pred hhhcCCCcEEEEecccccCcce----e---ccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchH
Q 015729 163 LDEYRHPALFLVDGVSSICAID----F---RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWK 235 (401)
Q Consensus 163 ~~~~~~~~~li~D~a~~~~~~~----~---~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~ 235 (401)
|++ +|+++|+|++|+.+... . .....+.++++.|.+|+++++.++|++++++++.+.+.....
T Consensus 204 ~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~~~~~~~-------- 273 (407)
T 2zc0_A 204 ASK--YDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLGTGFRIGWIIAEGEILKKVLMQKQ-------- 273 (407)
T ss_dssp HHH--HTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTCTTSCCEEEECCHHHHHHHHHHHT--------
T ss_pred HHH--cCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccCCCcceEEEecCHHHHHHHHHHHH--------
Confidence 999 99999999999865421 1 112224568889999999633357999999888776653210
Q ss_pred HHHHHhhcCCCCCCCCcHHHHHHHHHHHHHH-HH-hcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEE
Q 015729 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLI-FE-EGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAV 311 (401)
Q Consensus 236 ~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~-~~-~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~ 311 (401)
. +..+.+...+.++.++++.. .. .++++.++++.++++++.+.|++. ++.+..+ ..+.++++
T Consensus 274 --------~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~~~~~~ 339 (407)
T 2zc0_A 274 --------P--IDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKP----IAGMFVMF 339 (407)
T ss_dssp --------T--TTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCCC----SBSSEEEE
T ss_pred --------h--hcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEecC----CCcEEEEE
Confidence 1 11224555555555555532 12 346778888899999999999874 6665443 23457888
Q ss_pred EcCCCCCHHHHHHHHHhhCCeEEccCCCCC----CCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 312 IVPSHINSSEIVRRAWQRYNLSLGLGLNKV----AGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 312 ~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~----~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.+|++.+..++.+.|.+++||.+.+|..+. ..+++||++... +++|+++++++|+++++++
T Consensus 340 ~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~ 404 (407)
T 2zc0_A 340 FLPEGADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRP-SKEEIPIGIKKLAKLYKEK 404 (407)
T ss_dssp ECSTTCCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSS-CTTHHHHHHHHHHHHHHHH
T ss_pred EcCCCCCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHHHH
Confidence 987777888999999887799999885432 357899987664 8999999999999998764
No 76
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.98 E-value=7.4e-31 Score=246.63 Aligned_cols=309 Identities=12% Similarity=0.072 Sum_probs=232.8
Q ss_pred CcCChHHHHHHHccCcCC----CCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcC
Q 015729 17 PVHIPDQVIRAMNRNNED----YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~ 92 (401)
|.+.++.+++++.+.... ...+. .....++++.+++++|.+++ ++++++|+++|+..++.+++++||+|+++.+
T Consensus 37 ~~~~~~~v~~a~~~~~~~~~~~~~~y~-~~~~~~lr~~la~~~g~~~~-~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p 114 (360)
T 3hdo_A 37 PYPPSPEVVKAILEELGPDGAALRIYP-SASSQKLREVAGELYGFDPS-WIIMANGSDEVLNNLIRAFAAEGEEIGYVHP 114 (360)
T ss_dssp SSCCCHHHHHHHHHHHTTTCGGGGSCC-CSSCHHHHHHHHHHHTCCGG-GEEEESSHHHHHHHHHHHHCCTTCEEEEESS
T ss_pred CCCCCHHHHHHHHHHHhcccchhhcCC-CCchHHHHHHHHHHhCcCcc-eEEEcCCHHHHHHHHHHHHhCCCCEEEEcCC
Confidence 566788888888775432 11111 12246899999999997654 4999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEE
Q 015729 93 GQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALF 172 (401)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~l 172 (401)
+|++.. ..++..|++++.++.+.++.+ +++++. .+++++++++++||||.+.|++++.++|++ +|+++
T Consensus 115 ~~~~~~--~~~~~~g~~~~~v~~~~~~~~--~~l~~~------~~~~~v~i~~p~nptG~~~~~~~l~~l~~~--~~~~l 182 (360)
T 3hdo_A 115 SYSYYG--TLAEVQGARVRTFGLTGDFRI--AGFPER------YEGKVFFLTTPNAPLGPSFPLEYIDELARR--CAGML 182 (360)
T ss_dssp SCTHHH--HHHHHHTCEEEEECBCTTSSB--TTCCSS------BCSSEEEEESSCTTTCCCCCHHHHHHHHHH--BSSEE
T ss_pred ChHHHH--HHHHHCCCEEEEeeCCCCCCH--HHHHhh------cCCCEEEEeCCCCCCCCCcCHHHHHHHHHH--CCCEE
Confidence 888764 567778999999998766544 333221 135799999999999999999999999999 89999
Q ss_pred EEecccccCcc--eec-cCcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCC
Q 015729 173 LVDGVSSICAI--DFR-MDEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWP 248 (401)
Q Consensus 173 i~D~a~~~~~~--~~~-~~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 248 (401)
|+|++|+.... ... ....+.++++.|.+|+++ ++.++|++++++++.+.+..... .
T Consensus 183 i~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~--------------------~ 242 (360)
T 3hdo_A 183 VLDETYAEFAESNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARPEVIAALDKIRD--------------------H 242 (360)
T ss_dssp EEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCHHHHHHHHHHSC--------------------S
T ss_pred EEECChHhhCCcchhHHhccCCCEEEEecchHhhcCCccceeeEeeCHHHHHHHHHhCC--------------------C
Confidence 99999884221 111 122356788999999984 34457999999988777654211 2
Q ss_pred CCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHh
Q 015729 249 YTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQ 328 (401)
Q Consensus 249 ~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 328 (401)
++.+...++++.++++. ...+++.++++.++++++.+.|++.|+.+..+ .+.++++.++ +.+..++.+.|.+
T Consensus 243 ~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-----~~~~~~~~~~-~~~~~~l~~~l~~ 314 (360)
T 3hdo_A 243 YNLDRLAQAACVAALRD--QAYLSECCRRIRETREWFTTELRSIGYDVIPS-----QGNYLFATPP-DRDGKRVYDGLYA 314 (360)
T ss_dssp CCSCHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHTTCEECCC-----SSSEEEEECT-TCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCEEcCC-----CccEEEEECC-CCCHHHHHHHHHH
Confidence 34666666666666664 23467888999999999999999888776532 2346677774 5578899999986
Q ss_pred hCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 329 RYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 329 ~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
+ ||.++++..+..++++||++. +++|+|+++++|+++.+
T Consensus 315 ~-gi~v~~~~~~~~~~~iRis~~---~~~e~~~l~~al~~~~~ 353 (360)
T 3hdo_A 315 R-KVLVRHFSDPLLAHGMRISIG---TREEMEQTLAALKEIGE 353 (360)
T ss_dssp T-TEECBCCCSTTTTTSEEEECC---CHHHHHHHHHHHHHHHC
T ss_pred C-CEEEEECCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHhc
Confidence 6 999998765444578999864 89999999999998864
No 77
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.98 E-value=9.7e-31 Score=251.37 Aligned_cols=325 Identities=14% Similarity=0.068 Sum_probs=234.2
Q ss_pred ChHHHHHHHccCcCC----CCCccHHHHHHHHHHHHHHHh----cCC--CCceEEecCChhHHHHHHHhccCCCCCeEEE
Q 015729 20 IPDQVIRAMNRNNED----YRSPAVPALTKTLLEDIKKIF----KTT--SGTPFLIPTTGTGAWESALTNTLSPGDRIIS 89 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~----g~~--~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~ 89 (401)
.++.+.+++.+.... ...+.......++++.+++++ |.+ .++++++++|+++|+..++.+++++||+|++
T Consensus 59 ~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~ 138 (425)
T 1vp4_A 59 PRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVL 138 (425)
T ss_dssp CHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEE
T ss_pred CHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEE
Confidence 567777777664321 011222223456777777777 843 3345999999999999999998999999999
Q ss_pred EcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccC----CCCceEE-EEEecCCCcccccc---hHHHHH
Q 015729 90 FLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT----AHTIKAI-CIVHNETATGVTNN---LSKVRK 161 (401)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~----~~~~~~i-~~~~~~n~tG~~~~---l~~i~~ 161 (401)
..++|++.. ..++..|++++.++.++++ +|++++++++++.. ..++++| ++++++||||.+++ +++|.+
T Consensus 139 ~~p~y~~~~--~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~ 215 (425)
T 1vp4_A 139 DDPAYLGAI--NAFRQYLANFVVVPLEDDG-MDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVE 215 (425)
T ss_dssp EESCCHHHH--HHHHTTTCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred eCCCcHHHH--HHHHHcCCEEEEeccCCCC-CCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHH
Confidence 999887764 5567789999999987654 89999999987510 0256887 47899999999987 567889
Q ss_pred HhhhcCCCcEEEEecccccCcc----eecc---CcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccch
Q 015729 162 LLDEYRHPALFLVDGVSSICAI----DFRM---DEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDW 234 (401)
Q Consensus 162 l~~~~~~~~~li~D~a~~~~~~----~~~~---~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~ 234 (401)
+|++ +|+++|+|++|+.+.. .... ...+.++++.|.+|+++++.++|++++++++.+.+....
T Consensus 216 ~~~~--~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~l~~~~-------- 285 (425)
T 1vp4_A 216 IAEK--YDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLAPGLRIGMVAGSKEFIRKIVQAK-------- 285 (425)
T ss_dssp HHHH--TTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTCGGGCEEEEECCHHHHHHHHHHH--------
T ss_pred HHHH--cCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccccccceEEEeeCHHHHHHHHHHh--------
Confidence 9999 9999999999986432 1111 223567899999999963334699999998877665310
Q ss_pred HHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHH-HHhcHHHHHHHHHHHHHHHHHHHHHc-----CCccccCCCccCCcee
Q 015729 235 KDYIKFYNLGTFWPYTPSIQLLYGLRAALDLI-FEEGLENVIERHRRLGKATRLAVEAW-----GLKNCTQKEEWFSDTV 308 (401)
Q Consensus 235 ~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~-~~~g~~~~~~~~~~~~~~l~~~L~~~-----g~~~~~~~~~~~~~~~ 308 (401)
... .++.+...++++.++++.. ....+++.++++.++++++.+.|++. |+.+..+ ..+.+
T Consensus 286 ----~~~------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~----~~g~~ 351 (425)
T 1vp4_A 286 ----QSA------DLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKS----EGGLF 351 (425)
T ss_dssp ----HHH------HSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCC----SBSSE
T ss_pred ----hhh------cCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecC----CccEE
Confidence 000 1124555555566666542 12236778888889999999999885 5665433 23457
Q ss_pred EEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC----CCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 309 TAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV----AGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 309 ~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~----~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+++.++++.+..++.+.|.++ ||.+.+|..+. .++++||++.. .+++|+++++++|+++++++
T Consensus 352 ~~~~~~~~~~~~~l~~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~~~-~~~e~i~~~l~~l~~~l~~~ 418 (425)
T 1vp4_A 352 IWLTLPEGFDTWEMFEYAKRK-KVFYVPGRVFKVYDEPSPSMRLSFCL-PPDEKIVEGIKRLREVVLEY 418 (425)
T ss_dssp EEEECCTTCCTTTTHHHHHHH-TEECEEGGGGCTTCCCCSEEEEECSS-SCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCHHHHHHHHHHC-CCEEECchhhcCCCCCCCeEEEEeCC-CCHHHHHHHHHHHHHHHHHH
Confidence 888887666777899999888 99999884321 35789998765 48999999999999998764
No 78
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.98 E-value=1.6e-30 Score=253.26 Aligned_cols=348 Identities=12% Similarity=0.063 Sum_probs=246.4
Q ss_pred CcccccCCCcCChHHHHHHHccCcCCCC--C----------ccHHHHHHHHHHHHHHHhcCCCCc---eEEecCChhHHH
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNEDYR--S----------PAVPALTKTLLEDIKKIFKTTSGT---PFLIPTTGTGAW 73 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~~--~----------~~~~~~~~~l~~~la~~~g~~~~~---~i~~~~g~t~a~ 73 (401)
+...+.++..+++++|++++.+.....+ + ....+...++++.+++++|.+..+ .+++++ |++|+
T Consensus 45 ~~i~L~a~e~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~s-Gs~an 123 (483)
T 1rv3_A 45 VGLELIASENFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYS-GSPAN 123 (483)
T ss_dssp SSEECCTTCCCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSS-HHHHH
T ss_pred cCeEEEcCCCCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEECC-cHHHH
Confidence 3567788888899999999988554322 1 123455667889999999998543 255555 55888
Q ss_pred HHHHhccCCCCCeEEEEcCCcchHHHH------HHHHHcC--CcEEEEeCC-CCCCCChHHHHHHHhccCCCCceEEEEE
Q 015729 74 ESALTNTLSPGDRIISFLIGQFSLLWI------DQQQRLN--FNVDVVESD-WGEGAKLDVLASKLAADTAHTIKAICIV 144 (401)
Q Consensus 74 ~~~~~~~~~~gd~vl~~~~~~~~~~~~------~~~~~~g--~~~~~v~~~-~~~~~d~~~le~~~~~~~~~~~~~i~~~ 144 (401)
.+++.++++|||+|+++++.|.++... ..++..| .+++.++++ .++.+|++++++++++ +++++|++
T Consensus 124 ~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~---~~tklIi~- 199 (483)
T 1rv3_A 124 FAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARL---FHPKLIIA- 199 (483)
T ss_dssp HHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHH---HCCSEEEE-
T ss_pred HHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHHHHHHhh---cCCcEEEE-
Confidence 888888999999999999877665310 0112223 344444445 4567999999999974 25689988
Q ss_pred ecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcc---cceEEEecCCCcccCCCcceEEEecHHHHHH
Q 015729 145 HNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEW---GIDVALTGSQKALSLPTGMGIVCASPKALEA 221 (401)
Q Consensus 145 ~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~---~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~ 221 (401)
+++|++ .+.|+++|.++|++ +|+++++|++|+.|....+.... ++|++++|.||+|.|+.| |+++++++...
T Consensus 200 ~~sn~~-~~~dl~~i~~ia~~--~g~~livD~ah~~g~~~~~~~~~p~~~~div~~s~~K~l~Gprg-G~i~~~~~~~~- 274 (483)
T 1rv3_A 200 GTSCYS-RNLDYGRLRKIADE--NGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTLRGCRA-GMIFYRRGVRS- 274 (483)
T ss_dssp CCSSCC-SCCCHHHHHHHHHH--TTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESSGGGCCCSC-EEEEEECSBCC-
T ss_pred eCCcCC-CcCCHHHHHHHHHH--cCCEEEEEccchhcccccCCCCCCCCCCcEEEecCcccCCCCCc-eEEEEcchhhh-
Confidence 888888 88999999999999 99999999999876544333333 689999999999988887 99999876421
Q ss_pred hccCCCCccccchHHHHHH-hhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCC
Q 015729 222 SKTAKSVRVFFDWKDYIKF-YNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQK 300 (401)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 300 (401)
+..........++...... ...+ ..++++...++++.++++.....+++...+++.++++++.+.|.++|+++..+.
T Consensus 275 ~~~~~g~~~~y~~~~~~~~~~~~~--~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 352 (483)
T 1rv3_A 275 VDPKTGKEILYNLESLINSAVFPG--LQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGG 352 (483)
T ss_dssp -------CCBCCHHHHHHHHHTTT--TCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGS
T ss_pred hccccCcchhhHHHHHhhhhcCCc--ccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhcCCEeccCC
Confidence 1100000000122221111 1111 144677888888888998876667888999999999999999999898876532
Q ss_pred CccCCceeEEEEcC-CCCCHHHHHHHHHhhCCeEEc----cCCC-CCCCcEEEEeecccCC----HHHHHHHHHHHHHHH
Q 015729 301 EEWFSDTVTAVIVP-SHINSSEIVRRAWQRYNLSLG----LGLN-KVAGKVFRIGHLGHLN----ELQLLGCLAGVEMIL 370 (401)
Q Consensus 301 ~~~~~~~~~~~~~~-~~~~~~~l~~~L~~~~~i~v~----~g~~-~~~~~~~Ri~~~~~~~----~~di~~~~~~i~~~l 370 (401)
. .+.++++.++ .+.+..++.+.|.+ .||.+. +|.. ....+.+||++...++ ++|+++++++|++++
T Consensus 353 ~---~~~~~~v~~~~~g~~~~~~~~~L~~-~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l 428 (483)
T 1rv3_A 353 S---DNHLILVDLRSKGTDGGRAEKVLEA-CSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGI 428 (483)
T ss_dssp C---SSSEEEEEGGGGTCCHHHHHHHHHH-TTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred C---CCceEEEeccCCCCCHHHHHHHHHh-CCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHHHHHHHHHHHHHH
Confidence 1 2235566663 35677888888865 599998 7642 2235689999887666 999999999999998
Q ss_pred Hh
Q 015729 371 KD 372 (401)
Q Consensus 371 ~~ 372 (401)
+.
T Consensus 429 ~~ 430 (483)
T 1rv3_A 429 EL 430 (483)
T ss_dssp HH
T ss_pred Hh
Confidence 75
No 79
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.98 E-value=4.4e-31 Score=252.25 Aligned_cols=320 Identities=13% Similarity=0.089 Sum_probs=231.1
Q ss_pred CChHHHHHHHccCcCCC-CCccHHHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHhccCCCCCeEEEEcC
Q 015729 19 HIPDQVIRAMNRNNEDY-RSPAVPALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~~-~~~~~~~~~~~l~~~la~~~----g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~ 92 (401)
+.++.+.+++.+..... ..+.......++++.+++++ |.+ .++++++++|+++|+..++.+++++||+|+++.+
T Consensus 54 ~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~ 133 (406)
T 1xi9_A 54 QPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGP 133 (406)
T ss_dssp CCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred CCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCC
Confidence 45677777776643211 11221223456666666666 322 3355999999999999999888999999999999
Q ss_pred CcchHHHHHHHHHcCCcEEEEeCCC--CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcC
Q 015729 93 GQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYR 167 (401)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~ 167 (401)
+|++.. ..++..|++++.++.+. ++.+|++++++.+++ +++++++++++||||.+++ +++|.++|++
T Consensus 134 ~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~----~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~-- 205 (406)
T 1xi9_A 134 SYPPYT--GLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITD----RTKAIAVINPNNPTGALYDKKTLEEILNIAGE-- 205 (406)
T ss_dssp CCHHHH--HHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCT----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH--
T ss_pred CCccHH--HHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCc----CceEEEEECCCCCCCCCcCHHHHHHHHHHHHH--
Confidence 887654 55677899999999864 345799999999874 5799999999999999986 8889999999
Q ss_pred CCcEEEEecccccCcc---eeccCc--ccc-eEEEecCCCcccCCCc--ceEEE--ecH----HHHHHhccCCCCccccc
Q 015729 168 HPALFLVDGVSSICAI---DFRMDE--WGI-DVALTGSQKALSLPTG--MGIVC--ASP----KALEASKTAKSVRVFFD 233 (401)
Q Consensus 168 ~~~~li~D~a~~~~~~---~~~~~~--~~~-di~~~s~~K~l~g~~g--~G~l~--~~~----~~~~~~~~~~~~~~~~~ 233 (401)
+|+++|+|++|+.+.. ...... .+. |++++|.||+++ ++| +|+++ .++ ++.+.+...
T Consensus 206 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~l~~~l~~~-------- 276 (406)
T 1xi9_A 206 YEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYF-ATGWRLGYMYFVDPENKLSEVREAIDRL-------- 276 (406)
T ss_dssp HTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTC-CGGGCCEEEEEECTTCTTHHHHHHHHHH--------
T ss_pred cCCEEEEEcCccccccCCCCCCHHHcCCCceEEEEeccccccC-CCccEEEEEEEecCchhHHHHHHHHHHH--------
Confidence 9999999999986542 111111 356 899999999984 444 79998 888 777665431
Q ss_pred hHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEE
Q 015729 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVI 312 (401)
Q Consensus 234 ~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~ 312 (401)
.... ++++...+.++.++++.. .+++++.++++.++++++.+.|+++ |+.+..+. .+.++++.
T Consensus 277 -----~~~~------~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~~~~~~ 340 (406)
T 1xi9_A 277 -----ARIR------LCPNTPAQFAAIAGLTGP-MDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQ----GAFYIFPK 340 (406)
T ss_dssp -----HHHT------CCSCSHHHHHHHHHHHSC-CHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCC----BSSEECCE
T ss_pred -----HHhh------cCCCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecCC----eeEEEEEe
Confidence 1111 234555555666666422 1236778888999999999999887 77665432 34456666
Q ss_pred cCC--CCCHHHHHHHHHhhCCeEEccCCCCC--CCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 313 VPS--HINSSEIVRRAWQRYNLSLGLGLNKV--AGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 313 ~~~--~~~~~~l~~~L~~~~~i~v~~g~~~~--~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
++. +.+..++.+.|.++.||.+.++.... .++++||++. .+++++++++++|+++++++
T Consensus 341 ~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~--~~~~~i~~~~~~l~~~l~~~ 403 (406)
T 1xi9_A 341 IEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL--PPIEILEEAMDRFEKFMKER 403 (406)
T ss_dssp ECSCSCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC--SCHHHHHHHHHHHHHHHHHC
T ss_pred cCccCCCCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHHH
Confidence 754 45788899988744499998885432 2568999876 79999999999999998764
No 80
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.98 E-value=8.7e-31 Score=250.43 Aligned_cols=318 Identities=17% Similarity=0.132 Sum_probs=232.9
Q ss_pred CChHHHHHHHccCcCCC-CCccHHHHHHHHHHHHHHHhcC----C-CCceEEecCChhHHHHHHHhccCCCCCeEEEEcC
Q 015729 19 HIPDQVIRAMNRNNEDY-RSPAVPALTKTLLEDIKKIFKT----T-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~~-~~~~~~~~~~~l~~~la~~~g~----~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~ 92 (401)
+.++.+++++ +..... ..+.......++++.++++++. + .++++++++|+++|+..++.+++++||+|+++.+
T Consensus 56 ~~~~~v~~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~ 134 (409)
T 2gb3_A 56 KTPEVFFERI-YENKPEVVYYSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEP 134 (409)
T ss_dssp CCCTHHHHHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred CCCHHHHHHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 4567788887 543221 1222223345777777777752 2 3355999999999999999988999999999999
Q ss_pred CcchHHHHHHHHHcCCcEEEEeCCCCCCCC-hHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCC
Q 015729 93 GQFSLLWIDQQQRLNFNVDVVESDWGEGAK-LDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRH 168 (401)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d-~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~ 168 (401)
+|++.. ..++..|++++.++.+.+..++ ++++++++++ +++++++++++||||.+++ +++|.++|++ +
T Consensus 135 ~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~l~~----~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~--~ 206 (409)
T 2gb3_A 135 FYANYN--AFAKIAGVKLIPVTRRMEEGFAIPQNLESFINE----RTKGIVLSNPCNPTGVVYGKDEMRYLVEIAER--H 206 (409)
T ss_dssp CCTHHH--HHHHHHTCEEEEEECCGGGTSCCCTTGGGGCCT----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH--T
T ss_pred CchhHH--HHHHHcCCEEEEeccCCCCCCccHHHHHHhhCc----CCeEEEECCCCCCCCCCcCHHHHHHHHHHHHH--c
Confidence 988764 4567789999999987522233 8888888763 5799999999999999975 7889999999 9
Q ss_pred CcEEEEecccccCcc---eec-cCc-ccceEEEecCCCcccCCCc--ceEEEecH-HHHHHhccCCCCccccchHHHHHH
Q 015729 169 PALFLVDGVSSICAI---DFR-MDE-WGIDVALTGSQKALSLPTG--MGIVCASP-KALEASKTAKSVRVFFDWKDYIKF 240 (401)
Q Consensus 169 ~~~li~D~a~~~~~~---~~~-~~~-~~~di~~~s~~K~l~g~~g--~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
|+++|+|++|+.+.. ... ... .+.|++++|.||+++ ++| +|++++++ ++.+.+.... .
T Consensus 207 ~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~G~r~G~~~~~~~~l~~~l~~~~------------~- 272 (409)
T 2gb3_A 207 GLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFS-ACGARVGCLITRNEELISHAMKLA------------Q- 272 (409)
T ss_dssp TCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTT-CGGGCCEEEECSCHHHHHHHHHHH------------H-
T ss_pred CCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccC-CccceEEEEEECcHHHHHHHHHHH------------h-
Confidence 999999999986543 112 222 357999999999984 455 79999998 7776654310 0
Q ss_pred hhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCcc-ccCCCccCCceeEEEEcCCCCCH
Q 015729 241 YNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKN-CTQKEEWFSDTVTAVIVPSHINS 319 (401)
Q Consensus 241 ~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~ 319 (401)
. +. +++...++++.++++.. ..++++.++++.++++++.+.|+++|+++ ..+ ..+.++++.++ +.+.
T Consensus 273 ---~--~~-~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~~~~~~~~~~-~~~~ 340 (409)
T 2gb3_A 273 ---G--RL-APPLLEQIGSVGLLNLD-DSFFDFVRETYRERVETVLKKLEEHGLKRFTKP----SGAFYITAELP-VEDA 340 (409)
T ss_dssp ---H--SC-CCCHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCC----SBSSEEEEECS-SSCH
T ss_pred ---c--cC-CCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHHcCceeeeCC----CeeEEEEEEeC-CCCH
Confidence 1 11 35665556666666431 23467788889999999999999888776 433 23456777886 5678
Q ss_pred HHHHHHHHhh-----CCeEEccCCCC-----CCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 320 SEIVRRAWQR-----YNLSLGLGLNK-----VAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 320 ~~l~~~L~~~-----~~i~v~~g~~~-----~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.++.+.|.++ +||.+.++... ..++++||++. ++++++++++++|+++++++
T Consensus 341 ~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 402 (409)
T 2gb3_A 341 EEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV--LEKDLLSRAIDVLMEGLKMF 402 (409)
T ss_dssp HHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC--CCHHHHHHHHHHHHHHHHHh
Confidence 8999999876 59999887432 12578999876 69999999999999998764
No 81
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.97 E-value=5.3e-30 Score=245.91 Aligned_cols=324 Identities=10% Similarity=0.021 Sum_probs=242.1
Q ss_pred CcCChHHHHHHHccCcC---CCCCccHHHHHHHHHHHHHHHhcCC-CCceEEecCChhHHHHHHHhccCCCCCeEEEEcC
Q 015729 17 PVHIPDQVIRAMNRNNE---DYRSPAVPALTKTLLEDIKKIFKTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~---~~~~~~~~~~~~~l~~~la~~~g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~ 92 (401)
..+.++.+++++.+... ..+.....+...++.+.+++.++.+ .++++++++|+++|++.++.++.++||+|++..+
T Consensus 72 ~~~~~~~v~~a~~~~~~~~~~~y~~~~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~~~~gd~Vi~~~~ 151 (421)
T 3l8a_A 72 DFLPVPEIKEAIINYGREHIFGYNYFNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSP 151 (421)
T ss_dssp CSCCCHHHHHHHHHHHHHCCSSCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTEEEEEEEES
T ss_pred CCCCCHHHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEECCC
Confidence 44567888888876432 1222233677788888888888843 3355999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHcCCcEEEEeCC-CC--CCCChHHHHHHHhccCCCCceEEEEEecCCCccccc---chHHHHHHhhhc
Q 015729 93 GQFSLLWIDQQQRLNFNVDVVESD-WG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN---NLSKVRKLLDEY 166 (401)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~-~~--~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~---~l~~i~~l~~~~ 166 (401)
+|++.. ..++..|.+++.++.+ .+ +.+|++++++++++ ++++++++++++||+|.+. ++++|.++|++
T Consensus 152 ~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~---~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~- 225 (421)
T 3l8a_A 152 VYYPFA--RTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIID---NNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKK- 225 (421)
T ss_dssp CCHHHH--HHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHH---TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHH-
T ss_pred CcHHHH--HHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhc---cCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHH-
Confidence 888764 4567789999999975 23 25799999999974 3579999999999999984 58889999999
Q ss_pred CCCcEEEEecccccCcc------ee-c--cCcccceEEEecCCCccc-CCCcceEEEec-HHHHHHhccCCCCccccchH
Q 015729 167 RHPALFLVDGVSSICAI------DF-R--MDEWGIDVALTGSQKALS-LPTGMGIVCAS-PKALEASKTAKSVRVFFDWK 235 (401)
Q Consensus 167 ~~~~~li~D~a~~~~~~------~~-~--~~~~~~di~~~s~~K~l~-g~~g~G~l~~~-~~~~~~~~~~~~~~~~~~~~ 235 (401)
+|+++|+|++|+.+.. ++ . .+..+.++++.|.+|+++ ++.++|+++++ +++.+.+....
T Consensus 226 -~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~--------- 295 (421)
T 3l8a_A 226 -HGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQ--------- 295 (421)
T ss_dssp -HTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHH---------
T ss_pred -cCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHHH---------
Confidence 9999999999875421 11 1 122356789999999995 34456999988 77766554310
Q ss_pred HHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcC
Q 015729 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVP 314 (401)
Q Consensus 236 ~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~ 314 (401)
.. . ..++++...++++.++++.. ...+++..++..++.+++.+.|++. ++.+..+. ...+.++.++
T Consensus 296 ---~~---~--~~~~~n~~~~~a~~aal~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~----~~~~~~v~~~ 362 (421)
T 3l8a_A 296 ---LA---N--NQHEVPTVGMIATQAAFQYG-KPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPE----GTYLVWLDFS 362 (421)
T ss_dssp ---HH---T--TCSCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECCS----BSSEEEEECG
T ss_pred ---Hh---c--ccCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCCC----eeEEEEEecc
Confidence 00 1 12357777777777777742 2236788889999999999999986 77776542 3456668886
Q ss_pred C-CCCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 315 S-HINSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 315 ~-~~~~~~l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
. +.+..++.+.|.+++||.+.+|..+ ..++++||++. .+++++++++++|+++++
T Consensus 363 ~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~--~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 363 AYAIAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA--TPKNTVQEALSRIISVFG 420 (421)
T ss_dssp GGTCCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHHC-
T ss_pred ccCCCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 4 4677899999987679999987433 23578999877 489999999999998864
No 82
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.97 E-value=4.1e-30 Score=245.11 Aligned_cols=319 Identities=16% Similarity=0.189 Sum_probs=230.7
Q ss_pred ChHHHHHHHccCcCC-----C---CCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc--CCCCCeEEE
Q 015729 20 IPDQVIRAMNRNNED-----Y---RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIIS 89 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~-----~---~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--~~~gd~vl~ 89 (401)
.+|.+++++.+.... + ..+...+...++++.+++++|.+ +.+++++| +.++..++..+ ..+||+|++
T Consensus 61 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~i~~~sG-~~a~~~~~~~l~~~~~gd~Vl~ 137 (401)
T 2bwn_A 61 QHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQKE--AALVFSSA-YNANDATLSTLRVLFPGLIIYS 137 (401)
T ss_dssp GCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTCS--EEEEESCH-HHHHHHHHHHHHHHSTTCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhCCC--cEEEECCc-HHHHHHHHHHHhcCCCCCEEEE
Confidence 345677776663211 1 11234467889999999999873 44677555 55777766554 358999999
Q ss_pred EcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCC
Q 015729 90 FLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHP 169 (401)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~ 169 (401)
..++|++.. ..++..|++++.++.+ |++++++.+++...++++++++++++||||.+.|+++|.++|++ +|
T Consensus 138 ~~~~~~~~~--~~~~~~g~~~~~v~~~-----d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~--~~ 208 (401)
T 2bwn_A 138 DSLNHASMI--EGIKRNAGPKRIFRHN-----DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAEE--FG 208 (401)
T ss_dssp ETTCCHHHH--HHHHHSCCCEEEECTT-----CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHHHHHHHH--HT
T ss_pred CchhhHHHH--HHHHHcCCeEEEEcCC-----CHHHHHHHHHhhccCCceEEEEecCcCCCCCcCCHHHHHHHHHH--cC
Confidence 999887765 3456789999999865 78999998875321367999999999999999999999999999 99
Q ss_pred cEEEEecccccCcce-----e-ccCc--ccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHh
Q 015729 170 ALFLVDGVSSICAID-----F-RMDE--WGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFY 241 (401)
Q Consensus 170 ~~li~D~a~~~~~~~-----~-~~~~--~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (401)
+++|+|++|+.|... + .... .+.|+++.|.+|+++ .+| |+++.++++.+.+..... ...+
T Consensus 209 ~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~-~~G-G~~~~~~~~~~~l~~~~~----------~~~~ 276 (401)
T 2bwn_A 209 ALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYG-VFG-GYIAASARMVDAVRSYAP----------GFIF 276 (401)
T ss_dssp CEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTC-SCC-EEEEECHHHHHHHHHHCH----------HHHT
T ss_pred CEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhcc-CCC-CEEecCHHHHHHHHHhCc----------Ccee
Confidence 999999999854321 0 0011 136899999999995 556 999999887665542100 0011
Q ss_pred hcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHH
Q 015729 242 NLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSE 321 (401)
Q Consensus 242 ~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (401)
. .++++ ..++++.++++.+...++++.+++++++++++.+.|+++|+++..+ .+ .++++.++++.+..+
T Consensus 277 ~-----~~~~~-~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~-~~~~~~~~~~~~~~~ 345 (401)
T 2bwn_A 277 S-----TSLPP-AIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALGMPIIDH----GS-HIVPVVIGDPVHTKA 345 (401)
T ss_dssp S-----BCCCH-HHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCC----SS-SCEEEECCCHHHHHH
T ss_pred c-----CCCCH-HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHCCCcccCC----CC-CeEEEEeCChHHHHH
Confidence 1 12233 6677788888877665678899999999999999999888777643 23 367888865445678
Q ss_pred HHHHHHhhCCeEEccCCCCC---CCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 322 IVRRAWQRYNLSLGLGLNKV---AGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 322 l~~~L~~~~~i~v~~g~~~~---~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+.+.|.++.||.+.++..+. ..+++|+++..+++++|+++++++|+++++++
T Consensus 346 ~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~~ 400 (401)
T 2bwn_A 346 VSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWARC 400 (401)
T ss_dssp HHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC---
T ss_pred HHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Confidence 99888644499998875422 12589999988889999999999999988764
No 83
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.97 E-value=1.3e-30 Score=246.43 Aligned_cols=314 Identities=13% Similarity=0.010 Sum_probs=228.3
Q ss_pred CcCChHHHHHHHccCcCCCCCcc----HHHHHHHHHHHHHHHhcCC-CCceEEecCChhHHHHHHHhccCCC--CCeEEE
Q 015729 17 PVHIPDQVIRAMNRNNEDYRSPA----VPALTKTLLEDIKKIFKTT-SGTPFLIPTTGTGAWESALTNTLSP--GDRIIS 89 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~~~~----~~~~~~~l~~~la~~~g~~-~~~~i~~~~g~t~a~~~~~~~~~~~--gd~vl~ 89 (401)
+.+.++.+.+++.+.......+. ..+..+++.+.+++.+|.+ .++++++++|+++|+..++.+++++ ||+|++
T Consensus 34 ~~~~~~~v~~a~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~~~~~~gd~vl~ 113 (376)
T 3ezs_A 34 QFETPKFIQDALKNHTHSLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAY 113 (376)
T ss_dssp CSCCCHHHHHHHHTTGGGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHHHHTTTCSSCEEEE
T ss_pred CCCCCHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHHHHcCCCCCCEEEE
Confidence 45567899999988652211121 2344444444444445763 3356999999999999999999999 999999
Q ss_pred EcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhc
Q 015729 90 FLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEY 166 (401)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~ 166 (401)
..++|++.. ..++..|++++.++.+.++.+++ ++++.+.+ +++++++++++||||.+++ +++|.++|++
T Consensus 114 ~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~-~l~~~~~~----~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~- 185 (376)
T 3ezs_A 114 PNPFYQIYE--GAAKFIKAKSLLMPLTKENDFTP-SLNEKELQ----EVDLVILNSPNNPTGRTLSLEELISWVKLALK- 185 (376)
T ss_dssp EESCCTHHH--HHHHHTTCEEEEEECCGGGTSCC-CCCHHHHH----HCSEEEECSSCTTTCCCCCHHHHHHHHHHHHH-
T ss_pred ecCCcHhHH--HHHHHcCCEEEEcccCCCCCcch-hHHhhhcc----CCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHH-
Confidence 999888764 55778899999999887655666 77777764 4589999999999999987 5567777999
Q ss_pred CCCcEEEEecccccCcc---eeccC---------cccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccc
Q 015729 167 RHPALFLVDGVSSICAI---DFRMD---------EWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFD 233 (401)
Q Consensus 167 ~~~~~li~D~a~~~~~~---~~~~~---------~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~ 233 (401)
+|+++|+|++|+.+.. +.... ..+.++++.|.+|+++ ++.++|+++.++++.+.+....
T Consensus 186 -~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~------- 257 (376)
T 3ezs_A 186 -HDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLEKYKAFR------- 257 (376)
T ss_dssp -HTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHH-------
T ss_pred -cCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCHHHHHHHHHHH-------
Confidence 9999999999986432 11110 3567899999999984 3445799999999877665321
Q ss_pred hHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEc
Q 015729 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIV 313 (401)
Q Consensus 234 ~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 313 (401)
....++.+...++++.++++. ...+++.++++.++++.+.+.|+ ++. .+ ..+.++++.+
T Consensus 258 -----------~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~--~~~--~~----~~~~~~~~~~ 316 (376)
T 3ezs_A 258 -----------AYLGYTSANAIQKASEAAWLD--DRHAEFFRNIYANNLKLARKIFK--NTL--IY----PYSFYVYLPV 316 (376)
T ss_dssp -----------TTTCCCCCHHHHHHHHHHHHC--SHHHHHHHHHHHHHHHHHHHHST--TCC--CC----SBSSEEEEEC
T ss_pred -----------hhhcCCCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHhc--CCC--CC----CcceEEEEEC
Confidence 011334666666666666653 22356777888888888888776 544 21 2445778888
Q ss_pred CCCCCHHHHHHHHHhhCCeEEccCCCC----CCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 314 PSHINSSEIVRRAWQRYNLSLGLGLNK----VAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 314 ~~~~~~~~l~~~L~~~~~i~v~~g~~~----~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
+ +..++.+.|.+++||.+.+|..+ ..++++||++.. +++|+++++++|++++++
T Consensus 317 ~---~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~--~~~~i~~~l~~l~~~l~~ 374 (376)
T 3ezs_A 317 Q---NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY--DTPLLEKPLEIIETYREN 374 (376)
T ss_dssp S---CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS--CHHHHHHHHHHHHHHHCC
T ss_pred C---CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence 5 67889999987459999988543 245789998765 999999999999998864
No 84
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.97 E-value=7.9e-30 Score=242.91 Aligned_cols=324 Identities=11% Similarity=0.062 Sum_probs=233.7
Q ss_pred cCChHHHHHHHccCcCC-CCCccHHHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHhccCCCCCeEEEEc
Q 015729 18 VHIPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (401)
Q Consensus 18 ~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~----g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~ 91 (401)
.+.++.+.+++.+.... ...+... ..++++.+++++ |.+ .++++++++|+++|+..++.+++++||+|++..
T Consensus 43 ~~~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~gd~vl~~~ 120 (399)
T 1c7n_A 43 FKNPPELIEGLKKYLDETVLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIIT 120 (399)
T ss_dssp SCCCHHHHHHHHHHHHHCCCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEECS
T ss_pred CCCCHHHHHHHHHHHhcCCCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcC
Confidence 44667788877764321 1111111 456666666654 632 234599999999999999999899999999999
Q ss_pred CCcchHHHHHHHHHcCCcEEEEeCC-CC--CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhh
Q 015729 92 IGQFSLLWIDQQQRLNFNVDVVESD-WG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDE 165 (401)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~-~~--~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~ 165 (401)
++|++.. ..++..|++++.++.+ .+ +.+|++++++++++ ++++++++++++||||.+.| +++|.++|++
T Consensus 121 p~~~~~~--~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~---~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~ 195 (399)
T 1c7n_A 121 PVYYPFF--MAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKD---KNNKALLFCSPHNPVGRVWKKDELQKIKDIVLK 195 (399)
T ss_dssp SCCTHHH--HHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTC---TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHH
T ss_pred CCcHhHH--HHHHHcCCEEEecccccCCCCEEEcHHHHHHHhcc---CCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHH
Confidence 9888765 4567789999988875 32 24899999999974 35799999999999999998 8889999999
Q ss_pred cCCCcEEEEecccccCcc----eeccCc-----ccceEEEecCCCccc-CCCcceEEEec-HHHHHHhccCCCCccccch
Q 015729 166 YRHPALFLVDGVSSICAI----DFRMDE-----WGIDVALTGSQKALS-LPTGMGIVCAS-PKALEASKTAKSVRVFFDW 234 (401)
Q Consensus 166 ~~~~~~li~D~a~~~~~~----~~~~~~-----~~~di~~~s~~K~l~-g~~g~G~l~~~-~~~~~~~~~~~~~~~~~~~ 234 (401)
+|+++|+|++|+.+.. ..+... .+.++++.|.+|+++ ++.++|+++++ +++.+.+....
T Consensus 196 --~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~-------- 265 (399)
T 1c7n_A 196 --SDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSR-------- 265 (399)
T ss_dssp --SSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHH--------
T ss_pred --cCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHHHHHHHHH--------
Confidence 9999999999986432 112221 245789999999985 22346999986 56766654310
Q ss_pred HHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH-c-CCccccCCCccCCceeEEEE
Q 015729 235 KDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEA-W-GLKNCTQKEEWFSDTVTAVI 312 (401)
Q Consensus 235 ~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~ 312 (401)
..+ + .++++...++++.++++.. ...+++.++++.++++++.+.|++ + |+.+..+ ..+.++++.
T Consensus 266 ----~~~--~---~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~~~~~~~ 331 (399)
T 1c7n_A 266 ----DAT--S---GMPFTTLGYKACEICYKEC-GKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLI----EGTYLQWID 331 (399)
T ss_dssp ----HHT--T---CCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCC----SBSSEEEEE
T ss_pred ----hhc--c---cCCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecC----CceEEEEEE
Confidence 000 0 1245666666666666532 234677888899999999999998 6 7766543 234566788
Q ss_pred cCC-CCCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 313 VPS-HINSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 313 ~~~-~~~~~~l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
+++ +.+..++.+.|.+++||.+.+|..+ ..++++||++.. +++++++++++|+++++++.
T Consensus 332 ~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~~~ 394 (399)
T 1c7n_A 332 FRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAA--PSSVIQESLERLNKALKDLK 394 (399)
T ss_dssp CGGGCCCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHHHHC
T ss_pred cccCCCCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEecc--CHHHHHHHHHHHHHHHHHHH
Confidence 864 3578889999975559999888543 235789998876 48999999999999998753
No 85
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.97 E-value=1.5e-30 Score=244.11 Aligned_cols=334 Identities=13% Similarity=0.103 Sum_probs=237.8
Q ss_pred CCCCCcccccCCCcCChHHHHHHHccCcCCC-CCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCC
Q 015729 5 YAPGKNHLFVPGPVHIPDQVIRAMNRNNEDY-RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSP 83 (401)
Q Consensus 5 ~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~-~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~ 83 (401)
+.|+..|+....+.+.++.+++++.+....+ ......+...++++.+++++|.++. ++++++|+++|+..++.+++++
T Consensus 11 ~~p~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~~~g~~~~-~v~~~~g~t~a~~~~~~~~~~~ 89 (359)
T 1svv_A 11 AKPKPYSFVNDYSVGMHPKILDLMARDNMTQHAGYGQDSHCAKAARLIGELLERPDA-DVHFISGGTQTNLIACSLALRP 89 (359)
T ss_dssp ----CEECSCSCSSCCCHHHHHHHHHHTTCCCCSTTCSHHHHHHHHHHHHHHTCTTS-EEEEESCHHHHHHHHHHHHCCT
T ss_pred CCCeeEEecCCCcCCCCHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHhCCCCc-cEEEeCCchHHHHHHHHHHhCC
Confidence 3456678877777788999999998865432 2334457788999999999997654 4999999999999999998999
Q ss_pred CCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccC---CCCceEEEEEecCCCcccccc---hH
Q 015729 84 GDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT---AHTIKAICIVHNETATGVTNN---LS 157 (401)
Q Consensus 84 gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~---~~~~~~i~~~~~~n~tG~~~~---l~ 157 (401)
||+|+++.++|+++.....++..|++++.++.+ ++.+|++++++.+++.. ..++++++++++ ||||.+.| ++
T Consensus 90 gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~ 167 (359)
T 1svv_A 90 WEAVIATQLGHISTHETGAIEATGHKVVTAPCP-DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQELE 167 (359)
T ss_dssp TEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT-TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHHH
T ss_pred CCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC-CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHHH
Confidence 999999999888765211467789999999986 67799999999997631 113799999988 79999998 88
Q ss_pred HHHHHhhhcCCCcEEEEeccc---ccCcceeccCc----ccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCcc
Q 015729 158 KVRKLLDEYRHPALFLVDGVS---SICAIDFRMDE----WGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRV 230 (401)
Q Consensus 158 ~i~~l~~~~~~~~~li~D~a~---~~~~~~~~~~~----~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~ 230 (401)
+|.++|++ +|+++|+|++| +.+..+.+... ...|++++|++|+ +++.|+|++++++++.+.+...
T Consensus 168 ~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~-g~~~~~g~l~~~~~~~~~~~~~----- 239 (359)
T 1svv_A 168 DISASCKE--HGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKA-GGMFGEALIILNDALKPNARHL----- 239 (359)
T ss_dssp HHHHHHHH--HTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTT-TCSSCEEEEECSGGGCTTHHHH-----
T ss_pred HHHHHHHH--hCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccC-CCCCceEEEEEcccHHHHHHHH-----
Confidence 89999999 99999999998 44443333222 3579999999996 4677889999998875544321
Q ss_pred ccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEE
Q 015729 231 FFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTA 310 (401)
Q Consensus 231 ~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~ 310 (401)
. ...+. ..+.+....+++. ..+.+.++++..+++.++++++.+.|+..|+++..+. ...+++
T Consensus 240 --------~-~~~~~--~~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~----~~~~~~ 301 (359)
T 1svv_A 240 --------I-KQRGA--LMAKGWLLGIQFE---VLMKDNLFFELGAHSNKMAAILKAGLEACGIRLAWPS----ASNQLF 301 (359)
T ss_dssp --------H-HHTTC--CCTTTHHHHHHHH---HHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCC----SSSEEC
T ss_pred --------H-hcCCc--ccccchhhHHHHH---HHHhhhhHHHHHHHHHHHHHHHHHHhccCCeEEccCC----ccceEE
Confidence 0 00111 1111222222222 2233334678889999999999999943488776432 223555
Q ss_pred EEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 311 VIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 311 ~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+.++ .++.+.|.+++||.+.... ....+++||++....+++|+++++++|+++++++
T Consensus 302 ~~~~-----~~~~~~l~~~~gi~v~~~~-~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 358 (359)
T 1svv_A 302 PILE-----NTMIAELNNDFDMYTVEPL-KDGTCIMRLCTSWATEEKECHRFVEVLKRLVAST 358 (359)
T ss_dssp BEEE-----HHHHHHHTTTEECEEEEEE-TTTEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred EEcC-----HHHHHHHHHhcCEEEEecc-cCCCceEEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence 5553 4788888876688873211 1234679998777789999999999999887653
No 86
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.97 E-value=1.8e-29 Score=246.99 Aligned_cols=342 Identities=12% Similarity=0.027 Sum_probs=250.8
Q ss_pred CCcCChHHHHHHHccCcCC-----CCCccHHHHHHHHHHHHHHHhcCC--CCc--eEEecCChhHHHHHHHhccCCC---
Q 015729 16 GPVHIPDQVIRAMNRNNED-----YRSPAVPALTKTLLEDIKKIFKTT--SGT--PFLIPTTGTGAWESALTNTLSP--- 83 (401)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~--~~~--~i~~~~g~t~a~~~~~~~~~~~--- 83 (401)
++..+++.+.+++...... ...+...++..++++.+++++|.+ +.+ ..++++|+++|+..++.++..+
T Consensus 64 ~t~~~~~~v~~~l~~~~~~~~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~ 143 (502)
T 3hbx_A 64 VTTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQN 143 (502)
T ss_dssp SCCCCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHhccCCCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhH
Confidence 4566778888888774322 123445567778999999999997 332 2346899999999887665443
Q ss_pred -----CC-----eEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCC-CCCChHHHHHHHhccCCCCceEEEEEecCCCccc
Q 015729 84 -----GD-----RIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG-EGAKLDVLASKLAADTAHTIKAICIVHNETATGV 152 (401)
Q Consensus 84 -----gd-----~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~ 152 (401)
|+ +|+++.+.|++. ...++..|++++.++++.+ +.+|++++++++++ ++++|++++++|+||.
T Consensus 144 ~~~~~G~~~~~~~vi~~~~~h~s~--~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~----~t~~v~~~~~~n~tG~ 217 (502)
T 3hbx_A 144 KRKAEGKPVDKPNIVTGANVQVCW--EKFARYFEVELKEVKLSEGYYVMDPQQAVDMVDE----NTICVAAILGSTLNGE 217 (502)
T ss_dssp HHHHTTCCCSCCEEEEETTCCHHH--HHHHHHTTCEEEEECCBTTBCSCCHHHHHHHCCT----TEEEEEEEBSCTTTCC
T ss_pred HHHhcCCCCCCcEEEEcCCchHHH--HHHHHHcCceeEEEecCCCcCcCCHHHHHHHHhh----CCEEEEEecCCCCCCc
Confidence 66 899999887765 4668889999999998876 78999999999985 5689999999999999
Q ss_pred ccchHHHHHHhhhc----CCCcEEEEecccccCcc-------eeccCcccceEEEecCCCcccCCCcceEEEecHH-HHH
Q 015729 153 TNNLSKVRKLLDEY----RHPALFLVDGVSSICAI-------DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPK-ALE 220 (401)
Q Consensus 153 ~~~l~~i~~l~~~~----~~~~~li~D~a~~~~~~-------~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~-~~~ 220 (401)
+.|+++|.++|+++ ++|+++|+|+||+.+.. +.++...++|++.+++||++.++.|+|+++++++ .+.
T Consensus 218 ~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~G~~~~~~~~~l~ 297 (502)
T 3hbx_A 218 FEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLP 297 (502)
T ss_dssp BCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSC
T ss_pred ccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccCCCCCeEEEEEeCHHHhh
Confidence 99999999999992 22999999999985542 2333445899999999999988999998887654 321
Q ss_pred HhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccC
Q 015729 221 ASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQ 299 (401)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 299 (401)
........ |.. .......+.++.+...++++.+++..+..+++.+..++..++++++.+.|+++ ++++..+
T Consensus 298 ~~~~~~~~--yl~------~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 369 (502)
T 3hbx_A 298 EELIFHIN--YLG------ADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSK 369 (502)
T ss_dssp GGGCEEEC--SSS------SCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSC
T ss_pred HHhccCcc--ccc------CCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 11110000 000 00000111234555567788889988888888999999999999999999998 4777653
Q ss_pred CCccCCceeEEEEcCCC--CCHHHHHHHHHhhCCeEEccCCCC---CCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 300 KEEWFSDTVTAVIVPSH--INSSEIVRRAWQRYNLSLGLGLNK---VAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 300 ~~~~~~~~~~~~~~~~~--~~~~~l~~~L~~~~~i~v~~g~~~---~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
.+ .. .++.|.++.+ .+..++.+.|.++ ||.+.....+ ....++||++...+|++|++.+++.|+++++++.
T Consensus 370 ~~--~~-~~v~f~~~~~~~~~~~~l~~~L~~~-Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~~l~~l~ 445 (502)
T 3hbx_A 370 DE--GV-PLVAFSLKDSSCHTEFEISDMLRRY-GWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMRELD 445 (502)
T ss_dssp SS--SS-SEEEEEESSCSSCCHHHHHHHHHTT-TCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CC--Cc-eEEEEEecCCCcCCHHHHHHHHHhC-CcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 11 23 4677887542 5667999999876 8886543222 1235799999999999999999999999987764
Q ss_pred C
Q 015729 375 Y 375 (401)
Q Consensus 375 ~ 375 (401)
.
T Consensus 446 ~ 446 (502)
T 3hbx_A 446 E 446 (502)
T ss_dssp T
T ss_pred h
Confidence 3
No 87
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.97 E-value=2.3e-29 Score=239.02 Aligned_cols=323 Identities=13% Similarity=0.043 Sum_probs=232.8
Q ss_pred cCChHHHHHHHccCcCCC-CCccHHHHHHH-HHHHHHHHh----cCC-CCceEEecCChhHHHHHHHhccCCCCCeEEEE
Q 015729 18 VHIPDQVIRAMNRNNEDY-RSPAVPALTKT-LLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (401)
Q Consensus 18 ~~~~~~v~~a~~~~~~~~-~~~~~~~~~~~-l~~~la~~~----g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 90 (401)
.+.++.+.+++.+..... ..+... ..+ +++.+++++ |.+ .++++++++|+++|+..++.+++++||+|+++
T Consensus 40 ~~~~~~v~~a~~~~~~~~~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~ 117 (390)
T 1d2f_A 40 FATAPCIIEALNQRLMHGVFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIH 117 (390)
T ss_dssp SCCCHHHHHHHHHHHTTCCCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSSCTTCEEEEE
T ss_pred CCCCHHHHHHHHHHHhCCCCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEc
Confidence 356778888887754221 111111 345 777777765 522 33559999999999999999999999999999
Q ss_pred cCCcchHHHHHHHHHcCCcEEEEeCCCCC---CCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhh
Q 015729 91 LIGQFSLLWIDQQQRLNFNVDVVESDWGE---GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLD 164 (401)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~---~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~ 164 (401)
.++|++.. ..++..|++++.++.+.++ .+|++++++++++ .+++++++++++||||.+.| +++|.++|+
T Consensus 118 ~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~---~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~ 192 (390)
T 1d2f_A 118 TPAYDAFY--KAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK---PECKIMLLCSPQNPTGKVWTCDELEIMADLCE 192 (390)
T ss_dssp ESCCHHHH--HHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTS---TTEEEEEEESSCTTTCCCCCTTHHHHHHHHHH
T ss_pred CCCcHHHH--HHHHHCCCEEEEeecccCCCccccCHHHHHHHhcc---CCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHH
Confidence 99888764 4567789999999986542 4799999999974 36799999999999999987 788999999
Q ss_pred hcCCCcEEEEecccccCcc----eeccCcc--c-ceEEEecCCCccc-CCCcceEEEec-HHHHHHhccCCCCccccchH
Q 015729 165 EYRHPALFLVDGVSSICAI----DFRMDEW--G-IDVALTGSQKALS-LPTGMGIVCAS-PKALEASKTAKSVRVFFDWK 235 (401)
Q Consensus 165 ~~~~~~~li~D~a~~~~~~----~~~~~~~--~-~di~~~s~~K~l~-g~~g~G~l~~~-~~~~~~~~~~~~~~~~~~~~ 235 (401)
+ +|+++|+|++|+.+.. ..+.... + .|. +.|.+|+++ ++.++|+++++ +++.+.+...
T Consensus 193 ~--~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~---------- 259 (390)
T 1d2f_A 193 R--HGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENSSSRDAYLSA---------- 259 (390)
T ss_dssp H--TTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSHHHHHHHHHH----------
T ss_pred H--cCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECCHHHHHHHHHH----------
Confidence 9 9999999999986432 1122222 1 266 999999984 23346999985 6766655421
Q ss_pred HHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH-c-CCccccCCCccCCceeEEEEc
Q 015729 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEA-W-GLKNCTQKEEWFSDTVTAVIV 313 (401)
Q Consensus 236 ~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~ 313 (401)
..|.+..++++...++++.++++.. ...+++.++++.++++++.+.|++ + |+.+..+ ..+.++++.+
T Consensus 260 ------~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~~~~~~~~ 328 (390)
T 1d2f_A 260 ------LKGRDGLSSPSVLALTAHIAAYQQG-APWLDALRIYLKDNLTYIADKMNAAFPELNWQIP----QSTYLAWLDL 328 (390)
T ss_dssp ------HHTTSCCCSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCC----SBCSEEEEEC
T ss_pred ------HhhhcccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEecC----CccEEEEEEc
Confidence 0100112246666666666666642 223677888899999999999998 5 7766543 2345667888
Q ss_pred CCC-CCHHHHHHHHHhhCCeEEccCCCCC--CCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 314 PSH-INSSEIVRRAWQRYNLSLGLGLNKV--AGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 314 ~~~-~~~~~l~~~L~~~~~i~v~~g~~~~--~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+.. .+..++.+.|.+++||.+.+|..+. .++++||++.. +++++++++++|+++++++
T Consensus 329 ~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~~~ 389 (390)
T 1d2f_A 329 RPLNIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC--PRSKLEKGVAGLINAIRAV 389 (390)
T ss_dssp GGGCCCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHhh
Confidence 643 5788899999855599999885432 35789998876 6899999999999988753
No 88
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.97 E-value=1e-30 Score=250.56 Aligned_cols=326 Identities=11% Similarity=0.043 Sum_probs=233.9
Q ss_pred cCChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHhc------------CCCCceEEecCChhHHHHHHHhccCCC
Q 015729 18 VHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFK------------TTSGTPFLIPTTGTGAWESALTNTLSP 83 (401)
Q Consensus 18 ~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g------------~~~~~~i~~~~g~t~a~~~~~~~~~~~ 83 (401)
.+.++.+++++.+.... ...+.......++++.++++++ .+ ++++++++|+++|+..++.+++++
T Consensus 49 ~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~-~~~v~~~~g~~~al~~~~~~l~~~ 127 (416)
T 1bw0_A 49 LLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIV-KDNVVLCSGGSHGILMAITAICDA 127 (416)
T ss_dssp SCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCC-GGGEEEESHHHHHHHHHHHHHCCT
T ss_pred CCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCC-cceEEEeCChHHHHHHHHHHhCCC
Confidence 56778888888764321 1122222345688888888887 33 345999999999999999988999
Q ss_pred CCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCC--CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHH
Q 015729 84 GDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSK 158 (401)
Q Consensus 84 gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~ 158 (401)
||+|+++.++|+++. ..++..|++++.++.+.+ +.+|++++++.+++ +++++++++|+||||.++| +++
T Consensus 128 gd~vl~~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~----~~~~v~i~~p~nptG~~~~~~~l~~ 201 (416)
T 1bw0_A 128 GDYALVPQPGFPHYE--TVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDD----KTKLLIVTNPSNPCGSNFSRKHVED 201 (416)
T ss_dssp TCEEEEEESCCTHHH--HHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCT----TEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred CCEEEEcCCCcHhHH--HHHHHcCcEEEEeecCcccCCCCCHHHHHHHhcc----CCeEEEEeCCCCCCCcccCHHHHHH
Confidence 999999999988754 467788999999987653 45899999999873 5689999999999999998 888
Q ss_pred HHHHhhhcCCCcEEEEecccccCcc--------eeccC---cccceEEEecCCCcccCC-CcceEEEecHH--HHHHhcc
Q 015729 159 VRKLLDEYRHPALFLVDGVSSICAI--------DFRMD---EWGIDVALTGSQKALSLP-TGMGIVCASPK--ALEASKT 224 (401)
Q Consensus 159 i~~l~~~~~~~~~li~D~a~~~~~~--------~~~~~---~~~~di~~~s~~K~l~g~-~g~G~l~~~~~--~~~~~~~ 224 (401)
|.++|++ +|++||+|++|+.+.. ..... ..+.++++.|.+|+++.+ .++|+++++++ ..+.+..
T Consensus 202 i~~~~~~--~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~ 279 (416)
T 1bw0_A 202 IVRLAEE--LRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLE 279 (416)
T ss_dssp HHHHHHH--HTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHH
T ss_pred HHHHHHH--cCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhHHHHHH
Confidence 9999999 9999999999986321 11111 223467889999997422 24799998764 3222211
Q ss_pred CCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCcc
Q 015729 225 AKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEW 303 (401)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 303 (401)
....+.. ..++++...++++.++++.....++++..++++++++++.+.|+++ |+.+..+.
T Consensus 280 ------------~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~--- 341 (416)
T 1bw0_A 280 ------------GLKRVGM---LVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPR--- 341 (416)
T ss_dssp ------------HHHHHHH---HHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCC---
T ss_pred ------------HHHHHhc---cccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCC---
Confidence 0011100 0223666666666666653224457788889999999999999887 77655432
Q ss_pred CCceeEEEEcCC-----CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 304 FSDTVTAVIVPS-----HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 304 ~~~~~~~~~~~~-----~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.+.++++.++. ..+..++.+.|.+++||.+.+|.....++++||++. .+++++++++++|++++++.
T Consensus 342 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~--~~~e~l~~~l~~l~~~l~~~ 413 (416)
T 1bw0_A 342 -GAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTT--RPVEVYREAVERIKAFCQRH 413 (416)
T ss_dssp -BTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred -eeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 23466677752 246778888886444999998865444679999884 58999999999999998764
No 89
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.97 E-value=6e-31 Score=252.56 Aligned_cols=323 Identities=14% Similarity=0.082 Sum_probs=231.9
Q ss_pred cCChHHHHHHHccCcCC-----CCC--ccHHHHHHHHHHHHHHHhcCC-CC-ceEEecCChhHHHHHHHhccCCCCCeEE
Q 015729 18 VHIPDQVIRAMNRNNED-----YRS--PAVPALTKTLLEDIKKIFKTT-SG-TPFLIPTTGTGAWESALTNTLSPGDRII 88 (401)
Q Consensus 18 ~~~~~~v~~a~~~~~~~-----~~~--~~~~~~~~~l~~~la~~~g~~-~~-~~i~~~~g~t~a~~~~~~~~~~~gd~vl 88 (401)
.+.++.+++++.+.... .+. ....+..+++.+.+.+.+|.+ .+ +++++++|+++|+..++.+++++||+|+
T Consensus 40 ~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl 119 (422)
T 3fvs_A 40 FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVI 119 (422)
T ss_dssp SCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEE
T ss_pred CCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEE
Confidence 34677888887764322 111 122333444444444444443 22 4699999999999999999999999999
Q ss_pred EEcCCcchHHHHHHHHHcCCcEEEEeCCC------------CCCCChHHHHHHHhccCCCCceEEEEEecCCCccccc--
Q 015729 89 SFLIGQFSLLWIDQQQRLNFNVDVVESDW------------GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN-- 154 (401)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~------------~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~-- 154 (401)
++.++|+++. ..++..|++++.++.+. ++.+|++++++++++ +++++++++++||||.+.
T Consensus 120 ~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~----~~~~v~~~~p~nptG~~~~~ 193 (422)
T 3fvs_A 120 IIEPFFDCYE--PMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTS----RTKALVLNTPNNPLGKVFSR 193 (422)
T ss_dssp EEESCCTTHH--HHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCT----TEEEEEEESSCTTTCCCCCH
T ss_pred EcCCCchhhH--HHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCC----CceEEEECCCCCCCCcCCCH
Confidence 9999888754 56777899999999875 235799999998863 679999999999999999
Q ss_pred -chHHHHHHhhhcCCCcEEEEecccccCcc----eec---cC-cccceEEEecCCCccc-CCCcceEEEecHHHHHHhcc
Q 015729 155 -NLSKVRKLLDEYRHPALFLVDGVSSICAI----DFR---MD-EWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKT 224 (401)
Q Consensus 155 -~l~~i~~l~~~~~~~~~li~D~a~~~~~~----~~~---~~-~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~ 224 (401)
++++|.++|++ +|+++|+|++|+.+.. +.+ .. ..+.++++.|.+|+++ ++.++|++++++++++.+..
T Consensus 194 ~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~ 271 (422)
T 3fvs_A 194 EELELVASLCQQ--HDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRT 271 (422)
T ss_dssp HHHHHHHHHHHH--HTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCHHHHHHHHH
T ss_pred HHHHHHHHHHHH--cCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEEeCHHHHHHHHH
Confidence 58889999999 9999999999985321 111 11 2356789999999985 33457999999988776643
Q ss_pred CCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHH------HHhcHHHHHHHHHHHHHHHHHHHHHcCCcccc
Q 015729 225 AKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLI------FEEGLENVIERHRRLGKATRLAVEAWGLKNCT 298 (401)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~------~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 298 (401)
. ... ..++.+...++++.++++.. ....+++.++++.++++++.+.|++.|+.+..
T Consensus 272 ~----------------~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 333 (422)
T 3fvs_A 272 V----------------HQN--SVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPII 333 (422)
T ss_dssp H----------------HHT--TTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEB
T ss_pred H----------------Hhh--ccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHcCCeecC
Confidence 1 011 12345666566666666531 12236788899999999999999988887655
Q ss_pred CCCccCCceeEEEEcCC---CCC----------HHHHHHHHHhhCCeEEccCCCC-------CCCcEEEEeecccCCHHH
Q 015729 299 QKEEWFSDTVTAVIVPS---HIN----------SSEIVRRAWQRYNLSLGLGLNK-------VAGKVFRIGHLGHLNELQ 358 (401)
Q Consensus 299 ~~~~~~~~~~~~~~~~~---~~~----------~~~l~~~L~~~~~i~v~~g~~~-------~~~~~~Ri~~~~~~~~~d 358 (401)
+. .+.++++.++. +.+ ..+++..|.+++||.+.+|..+ ...+++||++.. ++++
T Consensus 334 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~--~~e~ 407 (422)
T 3fvs_A 334 PQ----GSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVK--DEAT 407 (422)
T ss_dssp CS----BSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCC--CHHH
T ss_pred CC----eeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecC--CHHH
Confidence 42 34567777632 111 4578888776669999988543 235789998765 9999
Q ss_pred HHHHHHHHHHHHHh
Q 015729 359 LLGCLAGVEMILKD 372 (401)
Q Consensus 359 i~~~~~~i~~~l~~ 372 (401)
+++++++|++++++
T Consensus 408 i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 408 LQAMDEKLRKWKVE 421 (422)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998865
No 90
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.97 E-value=1.7e-29 Score=238.50 Aligned_cols=332 Identities=11% Similarity=0.047 Sum_probs=232.6
Q ss_pred CcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc---CCCCCeEEEEcCC
Q 015729 17 PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT---LSPGDRIISFLIG 93 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~---~~~gd~vl~~~~~ 93 (401)
.+++++.+++++.+....... .......++++.+++++|.+ .+++++|+++|+..++.++ +++||+|+++.++
T Consensus 8 ~~~~~~~v~~a~~~~~~~~~~-~~~~~~~~l~~~la~~~~~~---~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~~ 83 (375)
T 2fnu_A 8 EPCLDKEDKKAVLEVLNSKQL-TQGKRSLLFEEALCEFLGVK---HALVFNSATSALLTLYRNFSEFSADRNEIITTPIS 83 (375)
T ss_dssp CCCCCHHHHHHHHHHHTSSCC-SSSHHHHHHHHHHHHHHTCS---EEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSS
T ss_pred CCCCCHHHHHHHHHHHHcCcc-cCChHHHHHHHHHHHHhCCC---eEEEeCCHHHHHHHHHHHhcccCCCCCEEEECCCc
Confidence 456778888888875543221 12456789999999999986 4999999999999999988 8999999999999
Q ss_pred cchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEE
Q 015729 94 QFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFL 173 (401)
Q Consensus 94 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li 173 (401)
|++.. ..++..|++++.++.+.++.+|++++++++++ ++++++++++ +|.+.|+++|.++|++ +|+++|
T Consensus 84 ~~~~~--~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~----~~~~v~~~~~---tG~~~~l~~i~~l~~~--~~~~li 152 (375)
T 2fnu_A 84 FVATA--NMLLESGYTPVFAGIKNDGNIDELALEKLINE----RTKAIVSVDY---AGKSVEVESVQKLCKK--HSLSFL 152 (375)
T ss_dssp CTHHH--HHHHHTTCEEEECCBCTTSSBCGGGSGGGCCT----TEEEEEEECG---GGCCCCHHHHHHHHHH--HTCEEE
T ss_pred cHhHH--HHHHHCCCEEEEeccCCCCCCCHHHHHhhcCc----CceEEEEeCC---cCCccCHHHHHHHHHH--cCCEEE
Confidence 88775 34566899999999987778899999988863 5688888765 9999999999999999 999999
Q ss_pred EecccccCcceec--cCccc-ceEEEecCCCcccCCCcceEEEec--HHHHHHhccCCCCccccchHHHHHHhhcCCC-C
Q 015729 174 VDGVSSICAIDFR--MDEWG-IDVALTGSQKALSLPTGMGIVCAS--PKALEASKTAKSVRVFFDWKDYIKFYNLGTF-W 247 (401)
Q Consensus 174 ~D~a~~~~~~~~~--~~~~~-~di~~~s~~K~l~g~~g~G~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~ 247 (401)
+|++|+.+..+.. ....+ +++.++|+||++ ++ |+|+++++ +++.+++......... +. ....++.+.. +
T Consensus 153 ~D~a~~~~~~~~~~~~~~~~~i~~~s~s~~K~~-~~-g~g~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~ 227 (375)
T 2fnu_A 153 SDSSHALGSEYQNKKVGGFALASVFSFHAIKPI-TT-AEGGAVVTNDSELHEKMKLFRSHGML-KK--DFFEGEVKSIGH 227 (375)
T ss_dssp EECTTCTTCEETTEETTSSSSEEEEECCTTSSS-CC-SSCEEEEESCHHHHHHHHHHTBTTEE-ES--SSSCEEESSCCC
T ss_pred EECccccCCeECCeeccccCCeEEEeCCCCCCc-cc-cCceEEEeCCHHHHHHHHHHHhcCCc-cc--cccccccccccc
Confidence 9999998765422 22222 445556666988 45 78888873 6666655432211000 00 0000110100 0
Q ss_pred CCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCC-CccCCceeEEEEcCC-CC-CHHHHH
Q 015729 248 PYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQK-EEWFSDTVTAVIVPS-HI-NSSEIV 323 (401)
Q Consensus 248 ~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~~~~~~~~~~~~~~~-~~-~~~~l~ 323 (401)
....+. +.+++......++++..++.+++++++.+.|+++ |+++..+. .....+.++++.++. +. +..++.
T Consensus 228 ~~~~~~-----~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 302 (375)
T 2fnu_A 228 NFRLNE-----IQSALGLSQLKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLIL 302 (375)
T ss_dssp BCCCCH-----HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHHHH
T ss_pred cCCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCccccchHHHHH
Confidence 111222 2223333334467888999999999999999987 77665432 111233455666643 23 577899
Q ss_pred HHHHhhCCeEEccCCCCC---------------------CCcEEEEeecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 324 RRAWQRYNLSLGLGLNKV---------------------AGKVFRIGHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 324 ~~L~~~~~i~v~~g~~~~---------------------~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
+.|.++ ||.++..+.+. ..+.+||++...++++|+++++++|++++++++
T Consensus 303 ~~L~~~-gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~~ 373 (375)
T 2fnu_A 303 ESLHKR-GILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESFK 373 (375)
T ss_dssp HHHHHT-TEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHC-CCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 999765 99988433211 015799998888999999999999999998765
No 91
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.7e-30 Score=247.52 Aligned_cols=318 Identities=12% Similarity=0.075 Sum_probs=231.7
Q ss_pred CChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHhccCCCCCeEEEEc
Q 015729 19 HIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~----g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~ 91 (401)
+.++.+.+++.+.... ...+.......++++.+++++ |.+ .++++++++|+++|+..++.+++++||+|+++.
T Consensus 70 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~ 149 (447)
T 3b46_A 70 SPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFE 149 (447)
T ss_dssp CCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHHcCCCCEEEEeC
Confidence 3567777777664432 111211223456777777765 443 334699999999999999999999999999999
Q ss_pred CCcchHHHHHHHHHcCCcEEEEeCCCC------------CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---h
Q 015729 92 IGQFSLLWIDQQQRLNFNVDVVESDWG------------EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---L 156 (401)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~~------------~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l 156 (401)
+.|+++. ..++..|++++.++.+.+ +.+|+++++++++ ++++++++++++||||.+++ +
T Consensus 150 p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~v~l~~p~nptG~~~~~~~l 223 (447)
T 3b46_A 150 PFFDQYI--PNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAIT----SKTKAVIINTPHNPIGKVFTREEL 223 (447)
T ss_dssp SCCTTHH--HHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCC----TTEEEEEEESSCTTTCCCCCHHHH
T ss_pred CCchhHH--HHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhc----cCCeEEEEeCCCCCCCcccCHHHH
Confidence 9888754 456778999999987543 4689999999886 36799999999999999974 7
Q ss_pred HHHHHHhhhcCCCcEEEEecccccCcc-----ee-cc--CcccceEEEecCCCccc-CCCcceEEEe-cHHHHHHhccCC
Q 015729 157 SKVRKLLDEYRHPALFLVDGVSSICAI-----DF-RM--DEWGIDVALTGSQKALS-LPTGMGIVCA-SPKALEASKTAK 226 (401)
Q Consensus 157 ~~i~~l~~~~~~~~~li~D~a~~~~~~-----~~-~~--~~~~~di~~~s~~K~l~-g~~g~G~l~~-~~~~~~~~~~~~ 226 (401)
++|.++|++ +|++||+|++|+.+.. ++ .. ...+.++++.|.+|+++ ++.++|++++ ++++++.+...
T Consensus 224 ~~i~~l~~~--~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~~l~~~l~~~- 300 (447)
T 3b46_A 224 TTLGNICVK--HNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAELLSYAAKA- 300 (447)
T ss_dssp HHHHHHHHH--TTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCHHHHHHHHHH-
T ss_pred HHHHHHHHH--cCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCHHHHHHHHHH-
Confidence 889999999 9999999999985432 11 11 12468999999999985 2334899999 88887766431
Q ss_pred CCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCC
Q 015729 227 SVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFS 305 (401)
Q Consensus 227 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 305 (401)
... ..++.+...++++.++++..... .+++.+++++++++++.+.|+++|+++..+ ..
T Consensus 301 ------------~~~-----~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~ 359 (447)
T 3b46_A 301 ------------HTR-----ICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDELGLPYTAP----EG 359 (447)
T ss_dssp ------------HHH-----HTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTCCEECC----SB
T ss_pred ------------Hhh-----ccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHCCCeecCC----Ce
Confidence 000 12235555566677777765323 377888999999999999999988877643 23
Q ss_pred ceeEEEEcCCC---------------CCHHHHHHHHHhhCCeEEccCCCCC-------CCcEEEEeecccCCHHHHHHHH
Q 015729 306 DTVTAVIVPSH---------------INSSEIVRRAWQRYNLSLGLGLNKV-------AGKVFRIGHLGHLNELQLLGCL 363 (401)
Q Consensus 306 ~~~~~~~~~~~---------------~~~~~l~~~L~~~~~i~v~~g~~~~-------~~~~~Ri~~~~~~~~~di~~~~ 363 (401)
+.++++.++.. .+..+++++|.++.||.+.+|.... .++++||++.. +++++++++
T Consensus 360 g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~--~~e~l~~~~ 437 (447)
T 3b46_A 360 TYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCK--DDAYLENAV 437 (447)
T ss_dssp SSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCS--CHHHHHHHH
T ss_pred eEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeC--CHHHHHHHH
Confidence 45777887531 2456888888766699999884321 15789998864 899999999
Q ss_pred HHHHH
Q 015729 364 AGVEM 368 (401)
Q Consensus 364 ~~i~~ 368 (401)
++|++
T Consensus 438 ~~l~~ 442 (447)
T 3b46_A 438 ERLKL 442 (447)
T ss_dssp HHGGG
T ss_pred HHHHH
Confidence 99976
No 92
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.97 E-value=1.7e-29 Score=247.54 Aligned_cols=357 Identities=11% Similarity=0.063 Sum_probs=242.4
Q ss_pred CcccccCCCcCChHHHHHHHccCcCC---C--CCccHHHHHHHHHHHHHHHhcCCC-CceEEecCChhHHHHHHHhccCC
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNED---Y--RSPAVPALTKTLLEDIKKIFKTTS-GTPFLIPTTGTGAWESALTNTLS 82 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~---~--~~~~~~~~~~~l~~~la~~~g~~~-~~~i~~~~g~t~a~~~~~~~~~~ 82 (401)
+.+.+.+++...+..+.+++...... . .++....+..++.+.+++++|.+. ...+++++|||+|+..++.+...
T Consensus 97 ~f~~~~~~~~~~~~~~~e~l~~~~~~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~ 176 (511)
T 3vp6_A 97 RFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARY 176 (511)
T ss_dssp TEESSSSCCCCHHHHHHHHHHHHHCCCSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHH
T ss_pred CceEeecCCCcHHHHHHHHHHHHhccCCCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHH
Confidence 35556666655555444555542221 1 234455667788889999999974 35689999999999887755432
Q ss_pred --------------CCCeEEEEcCCcchHHHHHHHHHcCC---cEEEEeCCCCCCCChHHHHHHHhccC--CCCceEEEE
Q 015729 83 --------------PGDRIISFLIGQFSLLWIDQQQRLNF---NVDVVESDWGEGAKLDVLASKLAADT--AHTIKAICI 143 (401)
Q Consensus 83 --------------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~le~~~~~~~--~~~~~~i~~ 143 (401)
+++.|+++...|++.. ..++..|+ +++.++.+.++.+|+++|+++++++. +.+++++++
T Consensus 177 ~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~--~~~~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~ 254 (511)
T 3vp6_A 177 KYFPEVKTKGMAAVPKLVLFTSEQSHYSIK--KAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNA 254 (511)
T ss_dssp HHCTHHHHHCGGGSCCEEEEEETTSCTHHH--HHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HhhhhhhhcCcccCCCeEEEECCCchHHHH--HHHHHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEE
Confidence 5678888988888764 56777887 99999999889999999999997631 123789999
Q ss_pred EecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceec-----cC-cccceEEEecCCCcccCCCcceEEEecHH
Q 015729 144 VHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFR-----MD-EWGIDVALTGSQKALSLPTGMGIVCASPK 217 (401)
Q Consensus 144 ~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~-----~~-~~~~di~~~s~~K~l~g~~g~G~l~~~~~ 217 (401)
++++|++|.+.|+++|.++|++ +|+|+|+|++|+.+....+ .. ..++|++++++||+++++.|+|+++++++
T Consensus 255 ~~~~~~~G~vd~l~~I~~ia~~--~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~ 332 (511)
T 3vp6_A 255 TAGTTVYGAFDPIQEIADICEK--YNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEK 332 (511)
T ss_dssp EBSCSSSCCBCCHHHHHHHHHH--HTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESST
T ss_pred ecCCCCCcccccHHHHHHHHHH--cCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCH
Confidence 9999999999999999999999 9999999999998765321 11 13579999999999988999999988765
Q ss_pred -HHHHhccCCCCccccchHHHHHHhhcCC-CCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CC
Q 015729 218 -ALEASKTAKSVRVFFDWKDYIKFYNLGT-FWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GL 294 (401)
Q Consensus 218 -~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~ 294 (401)
...........+.+.........+..+. ....+.+ ..+.+++++++.+..+|+++..++..++++++++.|++. |+
T Consensus 333 ~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~-~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~ 411 (511)
T 3vp6_A 333 GILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRH-VDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEF 411 (511)
T ss_dssp THHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTE
T ss_pred HHHHHHhccCCccccCcccccccccCccCCCCCCCCc-hHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 4444332221111100000000000000 0011111 234677888888888889999999999999999999987 88
Q ss_pred ccccCCCccCCceeEEEEc-CCCCC---------------HHHHHHHHHhhCCeEEccCCCCCCCcEEEEee-cccCCHH
Q 015729 295 KNCTQKEEWFSDTVTAVIV-PSHIN---------------SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGH-LGHLNEL 357 (401)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~-~~~~~---------------~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~-~~~~~~~ 357 (401)
++..+.++ ..+ +++|.+ |.+.+ ..++.+.|.++..+.+.........+++|+++ ...++++
T Consensus 412 ~l~~~~~p-~~~-~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~ 489 (511)
T 3vp6_A 412 EMVFNGEP-EHT-NVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQS 489 (511)
T ss_dssp EESSSSCC-SSS-CEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHH
T ss_pred EEEecCCC-CeE-EEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEecCCCCCHH
Confidence 88763112 233 344443 33221 23688888887334443221111123699998 5678999
Q ss_pred HHHHHHHHHHHHHHh
Q 015729 358 QLLGCLAGVEMILKD 372 (401)
Q Consensus 358 di~~~~~~i~~~l~~ 372 (401)
||+.++++|++.-+.
T Consensus 490 di~~ll~~i~~~~~~ 504 (511)
T 3vp6_A 490 DIDFLIEEIERLGQD 504 (511)
T ss_dssp HHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999887654
No 93
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.97 E-value=1.2e-29 Score=241.40 Aligned_cols=318 Identities=13% Similarity=0.045 Sum_probs=229.7
Q ss_pred CcCChHHHHHHHccCcCCCCCc----cHHHHHHHHHHHHHHHhcCC---CCceEEecCChhHHHHHHHhccCCCC-----
Q 015729 17 PVHIPDQVIRAMNRNNEDYRSP----AVPALTKTLLEDIKKIFKTT---SGTPFLIPTTGTGAWESALTNTLSPG----- 84 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~~~----~~~~~~~~l~~~la~~~g~~---~~~~i~~~~g~t~a~~~~~~~~~~~g----- 84 (401)
+.+.++.+.+++.+.......+ ...+..+++.+.+.+.+|.+ +.+++++++|+++|+..++.+++++|
T Consensus 41 ~~~~~~~v~~a~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~ 120 (396)
T 3jtx_A 41 KHPTPKVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIK 120 (396)
T ss_dssp CSCCCHHHHHHHHHTGGGGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCC
T ss_pred CCCCCHHHHHHHHHHhhhccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCC
Confidence 4556788999988754322112 13444445555555555753 43159999999999999999989996
Q ss_pred CeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCC-CCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHH---HH
Q 015729 85 DRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGE-GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSK---VR 160 (401)
Q Consensus 85 d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~---i~ 160 (401)
|+|+++.++|+++. ..++..|++++.++.+.++ .+|++++++++++ +++++++++++||||.+++.++ |.
T Consensus 121 d~vl~~~p~~~~~~--~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~----~~~~v~l~~p~nptG~~~~~~~l~~i~ 194 (396)
T 3jtx_A 121 PAIVSPNPFYQIYE--GATLLGGGEIHFANCPAPSFNPDWRSISEEVWK----RTKLVFVCSPNNPSGSVLDLDGWKEVF 194 (396)
T ss_dssp CEEEEEESCCHHHH--HHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHH----TEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred CEEEEcCCCcHhHH--HHHHHcCCEEEEeecCCCCCccCHHHHHHhhcc----CcEEEEEECCCCCCCCcCCHHHHHHHH
Confidence 79999999877654 4677889999999985543 6799999999975 5699999999999999997655 88
Q ss_pred HHhhhcCCCcEEEEecccccCcc----eecc--------CcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCC
Q 015729 161 KLLDEYRHPALFLVDGVSSICAI----DFRM--------DEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKS 227 (401)
Q Consensus 161 ~l~~~~~~~~~li~D~a~~~~~~----~~~~--------~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~ 227 (401)
++|++ +|+++|+|++|+.+.. +... ...+.++++.|.+|.++ ++.++|+++.++++.+.+...
T Consensus 195 ~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~-- 270 (396)
T 3jtx_A 195 DLQDK--YGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLY-- 270 (396)
T ss_dssp HHHHH--HCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECHHHHHHHHHH--
T ss_pred HHHHH--cCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCHHHHHHHHHH--
Confidence 89999 9999999999986432 1111 02567899999999763 234579999999887766532
Q ss_pred CccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCce
Q 015729 228 VRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDT 307 (401)
Q Consensus 228 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 307 (401)
... ..++++...++++.++++. ...+++.++++.++.+.+.+.|.+. +.+..+ ..+.
T Consensus 271 -----------~~~-----~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~----~~~~ 327 (396)
T 3jtx_A 271 -----------RTY-----HGSAMSIPVQRASIAAWDD--EQHVIDNRRLYQEKFERVIPILQQV-FDVKLP----DASF 327 (396)
T ss_dssp -----------HHH-----HTCCCCHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHTTT-SCCCCC----SSSS
T ss_pred -----------Hhh-----cccCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhc-CCccCC----CeeE
Confidence 111 1234666666666666653 2336778888888888888888775 333322 2456
Q ss_pred eEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC--------CCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 308 VTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV--------AGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 308 ~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~--------~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
++++.++. .+..++.+.|.+++||.+.+|..+. ..+++||++.. +++++++++++|++++
T Consensus 328 ~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~--~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 328 YIWLKVPD-GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA--DVATCVKAAEDIVSLY 395 (396)
T ss_dssp EEEEECTT-SCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS--CHHHHHHHHHHHHHHC
T ss_pred EEEEECCC-CCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC--CHHHHHHHHHHHHHHh
Confidence 78888864 5778899998766699999885432 35789998765 9999999999998764
No 94
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.97 E-value=2e-29 Score=236.72 Aligned_cols=309 Identities=11% Similarity=0.093 Sum_probs=233.0
Q ss_pred CcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcch
Q 015729 17 PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFS 96 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~ 96 (401)
|.+.++.+++++.+.......+ ......++++.++++++.++. ++++++|+++|+..++.++ |+|+++.++|++
T Consensus 37 ~~~~~~~v~~a~~~~~~~~~~y-~~~~~~~l~~~la~~~~~~~~-~i~~~~g~t~al~~~~~~~----d~vi~~~~~~~~ 110 (361)
T 3ftb_A 37 PLGIPKSFLNNIDEGIKNLGVY-PDVNYRRLNKSIENYLKLKDI-GIVLGNGASEIIELSISLF----EKILIIVPSYAE 110 (361)
T ss_dssp TTCSCHHHHTTHHHHHHGGGSC-CCTTCHHHHHHHHHHHTCCSC-EEEEESSHHHHHHHHHTTC----SEEEEEESCCTH
T ss_pred CCCCCHHHHHHHHHHHHHhcCC-CCccHHHHHHHHHHHhCCCcc-eEEEcCCHHHHHHHHHHHc----CcEEEecCChHH
Confidence 4556788888777643221111 123457999999999998654 5999999999999998776 899999998887
Q ss_pred HHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCCCcEEE
Q 015729 97 LLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFL 173 (401)
Q Consensus 97 ~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~li 173 (401)
.. ..++..|++++.++.+.++.++++++++++++ ++++++++++||||.+.| +++|.++|++ +|+++|
T Consensus 111 ~~--~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~-----~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~--~~~~li 181 (361)
T 3ftb_A 111 YE--INAKKHGVSVVFSYLDENMCIDYEDIISKIDD-----VDSVIIGNPNNPNGGLINKEKFIHVLKLAEE--KKKTII 181 (361)
T ss_dssp HH--HHHHHTTCEEEEEECCTTSCCCHHHHHHHTTT-----CSEEEEETTBTTTTBCCCHHHHHHHHHHHHH--HTCEEE
T ss_pred HH--HHHHHcCCeEEEeecCcccCCCHHHHHHhccC-----CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhh--cCCEEE
Confidence 64 55777899999999998878899999999874 589999999999999987 5567777889 999999
Q ss_pred EecccccCcce-----ec-cCcccceEEEecCCCccc-CCCcceEEE-ecHHHHHHhccCCCCccccchHHHHHHhhcCC
Q 015729 174 VDGVSSICAID-----FR-MDEWGIDVALTGSQKALS-LPTGMGIVC-ASPKALEASKTAKSVRVFFDWKDYIKFYNLGT 245 (401)
Q Consensus 174 ~D~a~~~~~~~-----~~-~~~~~~di~~~s~~K~l~-g~~g~G~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 245 (401)
+|++|+.+... .. ....+.++++.|.+|+++ ++.++|+++ .++++.+.+.....
T Consensus 182 ~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~------------------ 243 (361)
T 3ftb_A 182 IDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQN------------------ 243 (361)
T ss_dssp EECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSC------------------
T ss_pred EECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCC------------------
Confidence 99998754431 11 112345688899999985 334568988 78888777654311
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCc-cccCCCccCCceeEEEEcCCCCCHHHHH
Q 015729 246 FWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLK-NCTQKEEWFSDTVTAVIVPSHINSSEIV 323 (401)
Q Consensus 246 ~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 323 (401)
.++++...++++.++++. ..++++.++++.++++++.+.|+++ ++. +..+ .+.++++.+++ .+..++.
T Consensus 244 --~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~l~ 313 (361)
T 3ftb_A 244 --PWNINCFAEMAAINCLKD--TNYIEESLLWIKKERKRFIEELNKIGFIKRVFSP-----HANFVLCRLEN-ISGEKLY 313 (361)
T ss_dssp --TTCSCHHHHHHHHHTSSC--HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECC-----SSSEEEEEESS-SCHHHHH
T ss_pred --CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCC-----CCeEEEEEcCC-CCHHHHH
Confidence 234667666667677663 3346788899999999999999987 666 5443 23467788865 5788999
Q ss_pred HHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 324 RRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 324 ~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
+.|.++ ||.+.+|..+ ..++++|+++. +++++++++++++.+.+.
T Consensus 314 ~~l~~~-gi~v~~g~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~~~~~ 360 (361)
T 3ftb_A 314 DSLLKE-DIVIRRCCNFIGLDDSFVRFAIK---DEKKNTKFLRALKGVENN 360 (361)
T ss_dssp HHHHTT-TEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHHHT
T ss_pred HHHHHC-CeEEeeCccCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHhc
Confidence 999877 9999988543 33678999864 788899999999887654
No 95
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.97 E-value=2.1e-29 Score=241.47 Aligned_cols=328 Identities=10% Similarity=0.022 Sum_probs=226.7
Q ss_pred CCCcCChHHHHHHHccCcCC-CCCccHHHHHHHHHHHHHHHh----cCCCCceEEecCChhHHHHHHHhccCCCCCeEEE
Q 015729 15 PGPVHIPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIF----KTTSGTPFLIPTTGTGAWESALTNTLSPGDRIIS 89 (401)
Q Consensus 15 ~~p~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~----g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~ 89 (401)
.++.++++.+.+++.+.... ...+.......++++.+++++ +.+...++++++|+++|+..++.+++++||+|++
T Consensus 52 ~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~ 131 (418)
T 3rq1_A 52 EGNLVFLKTVKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGIHHLIHNYTEPGDEVLT 131 (418)
T ss_dssp TSCBCCCHHHHHHHHTCCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCCccccHHHHHHHHHhcccccCCCCCCCChHHHHHHHHHHHhcccCccccccEEECCchHHHHHHHHHHhcCCCCEEEE
Confidence 34788899999998774321 111222223457777777766 2222226999999999999999999999999999
Q ss_pred EcCCcchHHHHHHHHHcCCcEEEEeCC-CCCCCChHHHHHHHhccCCCCce-EEEEEec-CCCcccccchHHH---HHHh
Q 015729 90 FLIGQFSLLWIDQQQRLNFNVDVVESD-WGEGAKLDVLASKLAADTAHTIK-AICIVHN-ETATGVTNNLSKV---RKLL 163 (401)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~le~~~~~~~~~~~~-~i~~~~~-~n~tG~~~~l~~i---~~l~ 163 (401)
+.|+|+++. ..++..|++++.++++ .++.+|++++++.+++....+++ ++++++| +||||.+.+.+++ .++|
T Consensus 132 ~~p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~ 209 (418)
T 3rq1_A 132 ADWYWGAYR--VICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFL 209 (418)
T ss_dssp ESSCCTHHH--HHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHH
T ss_pred CCCCchhHH--HHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Confidence 999887664 5678899999999984 44588999999999741001335 7888889 9999999986655 4555
Q ss_pred h------hcCCCcEEEEecccccCcce------e--ccCcccc---eEEEecCCCccc-CCCcceEEEe---cHHHHHHh
Q 015729 164 D------EYRHPALFLVDGVSSICAID------F--RMDEWGI---DVALTGSQKALS-LPTGMGIVCA---SPKALEAS 222 (401)
Q Consensus 164 ~------~~~~~~~li~D~a~~~~~~~------~--~~~~~~~---di~~~s~~K~l~-g~~g~G~l~~---~~~~~~~~ 222 (401)
+ + +|+++|+|++|...... + ....... .+++.|.+|+++ ++.++|++++ ++++.+.+
T Consensus 210 ~~~~~~~~--~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 287 (418)
T 3rq1_A 210 KDLVAIGR--NNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEF 287 (418)
T ss_dssp HHHHHTSS--CEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHH
T ss_pred HHhhhccC--CCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHH
Confidence 5 6 99999999998643211 0 1111122 378889999984 2345799998 88887766
Q ss_pred ccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHH-----HhcHHHHHHHHHHHHHHHHHHHHHcCCccc
Q 015729 223 KTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIF-----EEGLENVIERHRRLGKATRLAVEAWGLKNC 297 (401)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~-----~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~ 297 (401)
.... .....+. ..+++...+.++.++++... ....++.++++.++++.+.+.|+++|+++.
T Consensus 288 ~~~~------------~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 353 (418)
T 3rq1_A 288 FEVN------------KSTSRAT--WSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVGLPML 353 (418)
T ss_dssp HHHH------------HHHHHHH--TSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHH------------HHHHhhc--cCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 5320 0011011 12355555555555553211 112345677888899999999998888776
Q ss_pred cCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 298 TQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
.+. .+.++++.++ +..++++.|.++ ||.+.+| ++++||++. .++++++++++++|++++++++
T Consensus 354 ~~~----~~~~~~~~~~---~~~~~~~~l~~~-gi~v~~g-----~~~iRis~~-~~~~~~i~~~~~~l~~~l~~~~ 416 (418)
T 3rq1_A 354 PYR----GGFFITIPTD---SANAICEELKKE-HIYVIAL-----ANGIRIAAC-GIPKCQMTGLAEKIYNAMKSLG 416 (418)
T ss_dssp CCC----SSSEEEEECT---THHHHHHHHHHT-TEECEEC-----SSEEEEEGG-GSCHHHHTTHHHHHHHHHHHTT
T ss_pred CCC----ceEEEEcCCC---CHHHHHHHHHhC-CEEEecC-----CCCeEEEEe-cCCHHHHHHHHHHHHHHHHHHh
Confidence 542 3456666653 678898888655 9999876 468999855 5799999999999999998764
No 96
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.97 E-value=2.4e-29 Score=235.96 Aligned_cols=284 Identities=14% Similarity=0.095 Sum_probs=216.0
Q ss_pred HHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCC-CeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCC
Q 015729 44 TKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPG-DRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAK 122 (401)
Q Consensus 44 ~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d 122 (401)
..++++.+++++|.+++ ++++++|+++++..++.+++++| |+|+++.++|+++. ..++..|++++.++.+.++.+|
T Consensus 60 ~~~lr~~la~~~~~~~~-~v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~--~~~~~~g~~~~~v~~~~~~~~d 136 (356)
T 1fg7_A 60 PKAVIENYAQYAGVKPE-QVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYS--VSAETIGVECRTVPTLDNWQLD 136 (356)
T ss_dssp CHHHHHHHHHHHTSCGG-GEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHH--HHHHHHTCEEEECCCCTTSCCC
T ss_pred HHHHHHHHHHHhCCChH-HEEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHH--HHHHHcCCEEEEeeCCCCCCCC
Confidence 57899999999998754 49999999999999999988999 99999999888764 4567789999999988776789
Q ss_pred hHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcc--e-ecc-CcccceEEEec
Q 015729 123 LDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAI--D-FRM-DEWGIDVALTG 198 (401)
Q Consensus 123 ~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~--~-~~~-~~~~~di~~~s 198 (401)
+++++++++ +++++++++++||||.+.|.+++.++++...+|+++|+|++|+.+.. . .+. ...+.++++.|
T Consensus 137 ~~~l~~~i~-----~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s 211 (356)
T 1fg7_A 137 LQGISDKLD-----GVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRT 211 (356)
T ss_dssp HHHHHTSCT-----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEE
T ss_pred HHHHHHHhc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEec
Confidence 999988775 46899999999999999998888888877228999999999985441 1 122 33457899999
Q ss_pred CCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHH
Q 015729 199 SQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (401)
Q Consensus 199 ~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~ 276 (401)
.+|+++ .+| +|++++++++.+.+.... . +++.+...+.++.++++......+++.++
T Consensus 212 ~sK~~g-~~G~r~G~~~~~~~~~~~l~~~~-----------------~---~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 270 (356)
T 1fg7_A 212 LSKAFA-LAGLRCGFTLANEEVINLLMKVI-----------------A---PYPLSTPVADIAAQALSPQGIVAMRERVA 270 (356)
T ss_dssp SSSTTC-CGGGCCEEEEECHHHHHHHHHHS-----------------C---SSCSCHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred chHhhc-CchhhhEEEEeCHHHHHHHHHhc-----------------C---CCCCCHHHHHHHHHHhcCccHHHHHHHHH
Confidence 999984 444 699999999877665321 1 12455555555555554321112677888
Q ss_pred HHHHHHHHHHHHHHHcC--CccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEcc-CCCCCCCcEEEEeeccc
Q 015729 277 RHRRLGKATRLAVEAWG--LKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGL-GLNKVAGKVFRIGHLGH 353 (401)
Q Consensus 277 ~~~~~~~~l~~~L~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~-g~~~~~~~~~Ri~~~~~ 353 (401)
++.++++++.+.|++++ ..+.. ..+.++++.++ +..++.+.|.++ ||.+++ |..+..++++||++.
T Consensus 271 ~~~~~~~~l~~~L~~~~~~~~~~~-----~~~~~~~~~~~---~~~~l~~~L~~~-gI~v~~~g~~~~~~~~iRis~~-- 339 (356)
T 1fg7_A 271 QIIAEREYLIAALKEIPCVEQVFD-----SETNYILARFK---ASSAVFKSLWDQ-GIILRDQNKQPSLSGCLRITVG-- 339 (356)
T ss_dssp HHHHHHHHHHHHHHHSTTEEEECC-----CSSSEEEEEET---THHHHHHHHHHT-TEECEECTTSTTCTTEEEEECC--
T ss_pred HHHHHHHHHHHHHHhCCCceEECC-----CCCeEEEEECC---CHHHHHHHHHHC-CEEEEECCCCCCCCCeEEEEeC--
Confidence 89999999999999875 22222 12346778885 678899999654 999998 754434568999864
Q ss_pred CCHHHHHHHHHHHHH
Q 015729 354 LNELQLLGCLAGVEM 368 (401)
Q Consensus 354 ~~~~di~~~~~~i~~ 368 (401)
+++|+++++++|++
T Consensus 340 -~~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 340 -TREESQRVIDALRA 353 (356)
T ss_dssp -CHHHHHHHHHHHHT
T ss_pred -CHHHHHHHHHHHHh
Confidence 68999999998875
No 97
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.97 E-value=7.6e-29 Score=238.13 Aligned_cols=304 Identities=16% Similarity=0.108 Sum_probs=221.9
Q ss_pred HHHHHHHHHHHHHHHhcCCC--------CceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEE
Q 015729 40 VPALTKTLLEDIKKIFKTTS--------GTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVD 111 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~--------~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~ 111 (401)
..++.+++.+.+++.+|.+. ++++++++|+++|+..++.+++++||+|++..|+|++.. ..++..|++++
T Consensus 80 ~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--~~~~~~g~~~~ 157 (425)
T 2r2n_A 80 IPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTL--QSLHPLGCNII 157 (425)
T ss_dssp CHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHH--HHHGGGTCEEE
T ss_pred CHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHH--HHHHHcCCEEE
Confidence 34455555566666668764 257999999999999999999999999999999887754 56788899999
Q ss_pred EEeCCCCCCCChHHHHHHHhccC--------CCCceEEEE-EecCCCcccccchH---HHHHHhhhcCCCcEEEEecccc
Q 015729 112 VVESDWGEGAKLDVLASKLAADT--------AHTIKAICI-VHNETATGVTNNLS---KVRKLLDEYRHPALFLVDGVSS 179 (401)
Q Consensus 112 ~v~~~~~~~~d~~~le~~~~~~~--------~~~~~~i~~-~~~~n~tG~~~~l~---~i~~l~~~~~~~~~li~D~a~~ 179 (401)
.++.+.+ .+|++++++++++.. ..+++++++ ++++||||.+++.+ +|.++|++ +|++||+|++|+
T Consensus 158 ~v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~--~~~~li~De~~~ 234 (425)
T 2r2n_A 158 NVASDES-GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARK--YDFLIIEDDPYY 234 (425)
T ss_dssp EECEETT-EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHH--TTCEEEEECTTG
T ss_pred EeCcCCC-CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHH--cCCEEEEECCcc
Confidence 9998765 489999999997311 135788876 68899999999865 89999999 999999999987
Q ss_pred cCcc----e---eccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCc
Q 015729 180 ICAI----D---FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPS 252 (401)
Q Consensus 180 ~~~~----~---~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 252 (401)
.... . ...+..+.++++.|.+|+++++.++|++++++++.+.+.... .. ..++++
T Consensus 235 ~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~~l~~~l~~~~----------------~~--~~~~~~ 296 (425)
T 2r2n_A 235 FLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKPLIERVILHI----------------QV--STLHPS 296 (425)
T ss_dssp GGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEHHHHHHHHHHH----------------HT--TTCSSC
T ss_pred cccCCCCCCCCccccCCCCCEEEEccchhhccCccceEEEecCHHHHHHHHHHH----------------HH--hcCCCC
Confidence 3221 1 122223567999999999953334799999998877665320 01 123466
Q ss_pred HHHHHHHHHHHHHHHH----hcHHHHHHHHHHHHHHHHHHHHHc--CCc-cccCCCccCCceeEEEEcCCCCCHHH-HHH
Q 015729 253 IQLLYGLRAALDLIFE----EGLENVIERHRRLGKATRLAVEAW--GLK-NCTQKEEWFSDTVTAVIVPSHINSSE-IVR 324 (401)
Q Consensus 253 ~~~~~a~~~al~~~~~----~g~~~~~~~~~~~~~~l~~~L~~~--g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~ 324 (401)
...+.++.++++.... ..+++.+++++++++.+.+.|++. |+. +..+ ..+.++++.+++..+..+ +.+
T Consensus 297 ~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p----~~g~~~~~~~~~~~~~~~~~~~ 372 (425)
T 2r2n_A 297 TFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVP----AAGMFLWIKVKGINDVKELIEE 372 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCC----SBSSEEEEEETTCSCCHHHHHT
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCC----CceEEEEEEeCCCCCHHHHHHH
Confidence 6666666677765322 235677788889999999999884 653 3322 244678888876555556 567
Q ss_pred HHHhhCCeEEccCCCCC-----CCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 325 RAWQRYNLSLGLGLNKV-----AGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 325 ~L~~~~~i~v~~g~~~~-----~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.|.++ ||.+.+|..+. ..+++||++.. .+++++++++++|++++++
T Consensus 373 ~l~~~-gv~v~pg~~f~~~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~l~~ 423 (425)
T 2r2n_A 373 KAVKM-GVLMLPGNAFYVDSSAPSPYLRASFSS-ASPEQMDVAFQVLAQLIKE 423 (425)
T ss_dssp HHHHT-TEECEEGGGGSSSTTSCCCEEEEECSS-CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHC-CcEEechhhhcCCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHHHHHH
Confidence 77654 99999885432 24689998763 5999999999999998865
No 98
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.97 E-value=4.2e-29 Score=238.30 Aligned_cols=333 Identities=14% Similarity=0.120 Sum_probs=240.0
Q ss_pred cccccCCCcCChHHHHHHHccCcCCCC-----------C-ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHH
Q 015729 10 NHLFVPGPVHIPDQVIRAMNRNNEDYR-----------S-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESAL 77 (401)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~~~-----------~-~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~ 77 (401)
.+++.++..+.++.+++++.+...... + +...++.+++++.+++++|.+. . .+++++|++|+..++
T Consensus 25 ~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~~-~-~i~~~sGt~a~~~a~ 102 (405)
T 2vi8_A 25 KIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEH-A-NVQPHSGAQANMAVY 102 (405)
T ss_dssp SEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSE-E-ECCCSSHHHHHHHHH
T ss_pred ceeeccCcccCCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCc-e-EEEecCcHHHHHHHH
Confidence 345556666669999999988653110 1 1223344457789999999874 2 455556699999999
Q ss_pred hccCCCCCeEEEEcCCcchHHH-HHH--HHHcCCcEEEEeCC-CCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccc
Q 015729 78 TNTLSPGDRIISFLIGQFSLLW-IDQ--QQRLNFNVDVVESD-WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVT 153 (401)
Q Consensus 78 ~~~~~~gd~vl~~~~~~~~~~~-~~~--~~~~g~~~~~v~~~-~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~ 153 (401)
.+++++||+|+++.++|.++.. ... ....+.+++.++.+ .++.+|++++++++++ .++++++++ +++ .|..
T Consensus 103 ~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~---~~~~~v~~~-~~~-~~~~ 177 (405)
T 2vi8_A 103 FTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARL---HRPKLIVAA-AAA-YPRI 177 (405)
T ss_dssp HHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHH---HCCSEEEEC-CSS-CCSC
T ss_pred HHhcCCCCEEEEecccccchhcccchhhhccceeEEEecccccccCCcCHHHHHHHHHh---cCCeEEEEe-CCC-CCcc
Confidence 8889999999999997765531 000 11123467777765 4567899999999975 145777764 333 3667
Q ss_pred cchHHHHHHhhhcCCCcEEEEecccccCcceeccCcc---cceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCcc
Q 015729 154 NNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEW---GIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRV 230 (401)
Q Consensus 154 ~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~---~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~ 230 (401)
.++++|.++|++ +|+++|+|++|+.+....+.... .+|++++|.||+++|+.| |++++++++.+.+.....
T Consensus 178 ~~l~~i~~l~~~--~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~~~~~~~~~l~~~~~--- 251 (405)
T 2vi8_A 178 IDFAKFREIADE--VGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRG-GMILCQEQFAKQIDKAIF--- 251 (405)
T ss_dssp CCHHHHHHHHHH--HTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSC-EEEEECHHHHHHHHHHHT---
T ss_pred CCHHHHHHHHHH--cCCEEEEEccccccccccCcCCCccccCCEEEEeccccCCCCCC-eEEEEcHHHHHHHHhhhc---
Confidence 789999999999 99999999999865432222111 578999999999977888 999999888766543210
Q ss_pred ccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEE
Q 015729 231 FFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTA 310 (401)
Q Consensus 231 ~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~ 310 (401)
.+..++++...++++.++++.+...++++..+++.++++++.+.|+++|+++..+. ..+.+++
T Consensus 252 --------------~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~~ 314 (405)
T 2vi8_A 252 --------------PGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGG---TDNHLLL 314 (405)
T ss_dssp --------------TTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGS---CSSSEEE
T ss_pred --------------ccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeEecCC---CCceEEE
Confidence 01123466777778788888776556788999999999999999999888776532 1245777
Q ss_pred EEcCC-CCCHHHHHHHHHhhCCeEEccCCC------CCCCcEEEEeecc----cCCHHHHHHHHHHHHHHHHhc
Q 015729 311 VIVPS-HINSSEIVRRAWQRYNLSLGLGLN------KVAGKVFRIGHLG----HLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 311 ~~~~~-~~~~~~l~~~L~~~~~i~v~~g~~------~~~~~~~Ri~~~~----~~~~~di~~~~~~i~~~l~~~ 373 (401)
+.++. +.+..++.+.|.++ ||.+.+|.. ...++++|+++.. .++++|+++++++|+++++++
T Consensus 315 ~~~~~~~~~~~~~~~~l~~~-gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~ 387 (405)
T 2vi8_A 315 VDLRPQQLTGKTAEKVLDEV-GITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNV 387 (405)
T ss_dssp EECGGGTCCHHHHHHHHHHH-TEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCT
T ss_pred EEccCCCCCHHHHHHHHHHc-CceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhcc
Confidence 88853 45778898888765 999998742 2234679998875 478999999999999998755
No 99
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.97 E-value=8.8e-30 Score=245.44 Aligned_cols=337 Identities=11% Similarity=0.043 Sum_probs=234.6
Q ss_pred CCCcccccCCC-cCChHHHHHHHccCcCCCC-------------CccHHHHHHHHHHHHHHHhc--------CCCCceEE
Q 015729 7 PGKNHLFVPGP-VHIPDQVIRAMNRNNEDYR-------------SPAVPALTKTLLEDIKKIFK--------TTSGTPFL 64 (401)
Q Consensus 7 ~~~~~~~~~~p-~~~~~~v~~a~~~~~~~~~-------------~~~~~~~~~~l~~~la~~~g--------~~~~~~i~ 64 (401)
|.+.+.++-.. ....+.+.+++.+...... .+.......++++.++++++ .+. +.++
T Consensus 37 p~~~i~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~-~~v~ 115 (435)
T 3piu_A 37 TNGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDP-NHLV 115 (435)
T ss_dssp TTSBEECSSCCCCSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCG-GGEE
T ss_pred CCCeEEeccccccccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCH-HHEE
Confidence 33444444433 3346777788777543110 11112334688888888887 333 4599
Q ss_pred ecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHH-HcCCcEEEEeCCCC--CCCChHHHHHHHhcc--CCCCce
Q 015729 65 IPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQ-RLNFNVDVVESDWG--EGAKLDVLASKLAAD--TAHTIK 139 (401)
Q Consensus 65 ~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~~--~~~d~~~le~~~~~~--~~~~~~ 139 (401)
+++|+++|+..++.+++++||+|++..++|++.. ..+. ..|++++.++.+.+ ..+|++++++++++. .+.+++
T Consensus 116 ~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 193 (435)
T 3piu_A 116 LTAGATSANETFIFCLADPGEAVLIPTPYYPGFD--RDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVK 193 (435)
T ss_dssp EEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHH--HHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEE
T ss_pred EcCChHHHHHHHHHHhcCCCCeEEECCCccccHH--HHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeE
Confidence 9999999999999999999999999999887764 2344 67999999998764 357999999998751 112679
Q ss_pred EEEEEecCCCcccccch---HHHHHHhhhcCCCcEEEEecccccCcce----ecc----Cc---------ccceEEEecC
Q 015729 140 AICIVHNETATGVTNNL---SKVRKLLDEYRHPALFLVDGVSSICAID----FRM----DE---------WGIDVALTGS 199 (401)
Q Consensus 140 ~i~~~~~~n~tG~~~~l---~~i~~l~~~~~~~~~li~D~a~~~~~~~----~~~----~~---------~~~di~~~s~ 199 (401)
+|++++|+||||.+++. ++|.++|++ +|+++|+|++|+.+... ... .+ ...++++.|.
T Consensus 194 ~v~i~~p~nptG~~~~~~~l~~l~~~~~~--~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~ 271 (435)
T 3piu_A 194 GVLVTNPSNPLGTTMTRNELYLLLSFVED--KGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSL 271 (435)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHH--HTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEES
T ss_pred EEEEcCCCCCCCCCCCHHHHHHHHHHHHH--cCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEee
Confidence 99999999999999875 678888999 99999999999853221 111 11 2345889999
Q ss_pred CCccc-CCCcceEEEec-HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHH--HhcHHHHH
Q 015729 200 QKALS-LPTGMGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIF--EEGLENVI 275 (401)
Q Consensus 200 ~K~l~-g~~g~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~--~~g~~~~~ 275 (401)
+|+++ ++.++|+++++ +.+.+.+... +. .++.+....+++.++++... +..+++.+
T Consensus 272 sK~~g~~G~r~G~~~~~~~~~~~~~~~~------------------~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 331 (435)
T 3piu_A 272 SKDLGLPGFRVGAIYSNDDMVVAAATKM------------------SS--FGLVSSQTQHLLSAMLSDKKLTKNYIAENH 331 (435)
T ss_dssp SSSSCCGGGCEEEEEESCHHHHHHHHHH------------------GG--GSCCCHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred ecccCCCceeEEEEEeCCHHHHHHHHHH------------------hh--cCCCCHHHHHHHHHHhcChHHHHHHHHHHH
Confidence 99995 33457999984 5554444321 00 11234444444444444221 22346678
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCC------CHHHHHHHHHhhCCeEEccCCC--CCCCcEEE
Q 015729 276 ERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHI------NSSEIVRRAWQRYNLSLGLGLN--KVAGKVFR 347 (401)
Q Consensus 276 ~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~L~~~~~i~v~~g~~--~~~~~~~R 347 (401)
+++.++++++.+.|++.|+++..+ ..+.++++.+++.. +..++.+.|.+++||.+.+|.. ...++++|
T Consensus 332 ~~~~~~~~~l~~~L~~~g~~~~~~----~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iR 407 (435)
T 3piu_A 332 KRLKQRQKKLVSGLQKSGISCLNG----NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFR 407 (435)
T ss_dssp HHHHHHHHHHHHHHHTTTCEECCC----CSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEE
T ss_pred HHHHHHHHHHHHHHHhcCCcccCC----CeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEE
Confidence 888899999999998888876653 23457888886432 3457888888777999998743 23467899
Q ss_pred EeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 348 IGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 348 i~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
|++.. .+++++++++++|+++++++
T Consensus 408 i~~~~-~~~e~i~~~l~~l~~~l~~~ 432 (435)
T 3piu_A 408 VCFAN-LPERTLDLAMQRLKAFVGEY 432 (435)
T ss_dssp EECSS-SCHHHHHHHHHHHHHHHHHH
T ss_pred EEeeC-CCHHHHHHHHHHHHHHHHHH
Confidence 98744 49999999999999998765
No 100
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.97 E-value=8.8e-30 Score=244.92 Aligned_cols=299 Identities=14% Similarity=0.125 Sum_probs=219.0
Q ss_pred HHHHHHHHHHHhc--------CCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeC
Q 015729 44 TKTLLEDIKKIFK--------TTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVES 115 (401)
Q Consensus 44 ~~~l~~~la~~~g--------~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 115 (401)
..++++.++++++ .++ +++++++|+++++..++.++.++||+|+++.++|+++. ...+...|++++.++.
T Consensus 85 ~~~lr~~la~~~~~~~g~~~~~~~-~~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~-~~~~~~~g~~~~~v~~ 162 (428)
T 1iay_A 85 LPEFRKAIAKFMEKTRGGRVRFDP-ERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFN-RDLRWRTGVQLIPIHC 162 (428)
T ss_dssp CHHHHHHHHHHHHHHTTTCSCCCT-TSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHH-HHTTTTTCCEEEEECC
T ss_pred cHHHHHHHHHHHHHhcCCCCCCCh-hhEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchH-HHHHHhcCCEEEEeec
Confidence 5678888888886 433 45999999999999999998999999999999887754 2234467999999998
Q ss_pred CC--CCCCChHHHHHHHhcc--CCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCCCcEEEEecccccCcce----
Q 015729 116 DW--GEGAKLDVLASKLAAD--TAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDGVSSICAID---- 184 (401)
Q Consensus 116 ~~--~~~~d~~~le~~~~~~--~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~li~D~a~~~~~~~---- 184 (401)
+. +..+|++++++++++. ...+++++++++|+||||.+.| +++|.++|++ +|+++|+|++|+.+...
T Consensus 163 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~--~~~~li~Dea~~~~~~~~~~~ 240 (428)
T 1iay_A 163 ESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQ--HNIHLVCDEIYAATVFDTPQF 240 (428)
T ss_dssp CTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHT--TTCEEEEECTTGGGCCSSSCC
T ss_pred CCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHH--CCeEEEEeccccccccCCCCc
Confidence 64 3367999999998741 1136799999999999999999 8889999999 99999999999853221
Q ss_pred ec---cCc------ccce--EEEecCCCcccCCCc--ceEEEe-cHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCC
Q 015729 185 FR---MDE------WGID--VALTGSQKALSLPTG--MGIVCA-SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYT 250 (401)
Q Consensus 185 ~~---~~~------~~~d--i~~~s~~K~l~g~~g--~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 250 (401)
.+ ... ++.| +++.|.||+++ .+| +|++++ ++++.+.+... . . .++
T Consensus 241 ~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g-~~Glr~G~~~~~~~~~~~~~~~~-------------~----~---~~~ 299 (428)
T 1iay_A 241 VSIAEILDEQEMTYCNKDLVHIVYSLSKDMG-LPGFRVGIIYSFNDDVVNCARKM-------------S----S---FGL 299 (428)
T ss_dssp CCHHHHHTSGGGTTSCTTSEEEEEESTTTSS-CGGGCEEEEEESCHHHHHHHHHH-------------H----T---TSC
T ss_pred cCHHHhccccccccCCCCcEEEEecchhhcC-CCCceEEEEEeCCHHHHHHHHHH-------------H----h---ccc
Confidence 11 111 1145 88999999984 344 599998 67776655421 0 1 123
Q ss_pred CcHHHHHHHHHHHHHHH--HhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCC------CHHHH
Q 015729 251 PSIQLLYGLRAALDLIF--EEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHI------NSSEI 322 (401)
Q Consensus 251 ~~~~~~~a~~~al~~~~--~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l 322 (401)
.+...++++.++++... +..+++.++++.++++++.+.|+++|+++..+ ..+.++++.+++.. +..++
T Consensus 300 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~l 375 (428)
T 1iay_A 300 VSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKN----NAGLFCWMDLRPLLRESTFDSEMSL 375 (428)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCC----SSSSEEEEECGGGCSSSSHHHHHHH
T ss_pred CCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC----CeeEEEEEechhhcCCCchhHHHHH
Confidence 45555555555554321 22356788888999999999999888776543 23457788885421 24578
Q ss_pred HHHHHhhCCeEEccCCCCC--CCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 323 VRRAWQRYNLSLGLGLNKV--AGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 323 ~~~L~~~~~i~v~~g~~~~--~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.+.|.+++||.+.++.... .++++||++. ..+++++++++++|++++++
T Consensus 376 ~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~ 426 (428)
T 1iay_A 376 WRVIINDVKLNVSPGSSFECQEPGWFRVCFA-NMDDGTVDIALARIRRFVGV 426 (428)
T ss_dssp HHHHHHTSCEECEEGGGGTCSSSSEEEEECS-SSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCEEEeCchhhCCCCCCEEEEEEe-cCCHHHHHHHHHHHHHHHhc
Confidence 8888876799999885432 2468999887 57999999999999999864
No 101
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.97 E-value=3.3e-29 Score=238.58 Aligned_cols=324 Identities=11% Similarity=0.038 Sum_probs=224.1
Q ss_pred CChHHHHHHHccCcCC-------CCC--ccHHHHHHHHHHHHHHHhcCC-CCceEEecCChhHHHHHHHhccCCCC-CeE
Q 015729 19 HIPDQVIRAMNRNNED-------YRS--PAVPALTKTLLEDIKKIFKTT-SGTPFLIPTTGTGAWESALTNTLSPG-DRI 87 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~-------~~~--~~~~~~~~~l~~~la~~~g~~-~~~~i~~~~g~t~a~~~~~~~~~~~g-d~v 87 (401)
+.++.+.+++.+.... .+. ....++.+++.+.+.+.+|.+ .++++++++|+++|+..++.+++++| |+|
T Consensus 48 ~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~v 127 (398)
T 3ele_A 48 PAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEF 127 (398)
T ss_dssp CCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEE
T ss_pred CCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEE
Confidence 4567777777664321 111 122344444444444455542 34569999999999999999999999 999
Q ss_pred EEEcCCcchHHHHHHHHHcCCcEEEEeCCC-CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccch---HHHHHHh
Q 015729 88 ISFLIGQFSLLWIDQQQRLNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL---SKVRKLL 163 (401)
Q Consensus 88 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l---~~i~~l~ 163 (401)
++..++|+++. ..++..|++++.++.+. ++.+|++++++++++ +++++++++++||||.+++. ++|.++|
T Consensus 128 l~~~p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~----~~~~v~~~~p~nptG~~~~~~~l~~l~~~~ 201 (398)
T 3ele_A 128 ITIAPYFPEYK--VFVNAAGARLVEVPADTEHFQIDFDALEERINA----HTRGVIINSPNNPSGTVYSEETIKKLSDLL 201 (398)
T ss_dssp EEESSCCTHHH--HHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCT----TEEEEEECSSCTTTCCCCCHHHHHHHHHHH
T ss_pred EEeCCCchhhH--HHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCc----CCCEEEEcCCCCCCCCCCCHHHHHHHHHHH
Confidence 99999888754 56778899999999875 457899999999863 67999999999999999984 5556777
Q ss_pred hhc----CCCcEEEEecccccCcc-----eeccCcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccc
Q 015729 164 DEY----RHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFD 233 (401)
Q Consensus 164 ~~~----~~~~~li~D~a~~~~~~-----~~~~~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~ 233 (401)
+++ ++|+++|+|++|+.+.. +......+.++++.|.+|+++ ++.++|+++++++..+...
T Consensus 202 ~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~---------- 271 (398)
T 3ele_A 202 EKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAE---------- 271 (398)
T ss_dssp HHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHH----------
T ss_pred HhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCccceeEEEEEcchhhhHHH----------
Confidence 652 27999999999985321 222233457899999999995 4456899999887432110
Q ss_pred hHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEc
Q 015729 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIV 313 (401)
Q Consensus 234 ~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 313 (401)
+........... ...+++.....++.+++ .... .++++.++++++.+.|+++|+++..+ ..+.++++.+
T Consensus 272 ~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l---~~~~---~~~~~~~~~~~l~~~L~~~g~~~~~~----~~~~~~~~~~ 340 (398)
T 3ele_A 272 LYAAVCGAGRAL-GYVCAPSLFQKMIVKCQ---GATG---DINAYKENRDLLYEGLTRIGYHCFKP----DGAFYMFVKA 340 (398)
T ss_dssp HHHHHHHHHHHT-TCCCSCHHHHHHHTTCT---TCCC---CHHHHHHHHHHHHHHHHHHTCCEECC----SBSSEEEEEC
T ss_pred HHHHHHHHhhhc-cccCCCHHHHHHHHHHh---cCHH---HHHHHHHHHHHHHHHHHHcCCeecCC----CeeEEEEEEc
Confidence 000001011000 02234443333322222 2221 46778888999999999888877654 2345678888
Q ss_pred CCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 314 PSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 314 ~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
|.. +..++.+.|.++ ||.+.+|..+..++++||++. .+++++++++++|+++++++
T Consensus 341 ~~~-~~~~~~~~l~~~-gi~v~~g~~~~~~~~iRis~~--~~~e~i~~~l~~l~~~l~~~ 396 (398)
T 3ele_A 341 LED-DSNAFCEKAKEE-DVLIVAADGFGCPGWVRISYC--VDREMIKHSMPAFEKIYKKY 396 (398)
T ss_dssp SSS-CHHHHHHHHHTT-TEECEESGGGTCTTEEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred CCC-CHHHHHHHHHHC-CEEEeCccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 643 788899988765 999999866555679999874 59999999999999998764
No 102
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.97 E-value=6.5e-30 Score=246.00 Aligned_cols=324 Identities=11% Similarity=0.028 Sum_probs=234.9
Q ss_pred hHHH--HHHHccCcCC--CCCccHHHHHHHHHHHHHHHh-----cCCCCce---EEecCChhHHHHHHHhccCCCCCeEE
Q 015729 21 PDQV--IRAMNRNNED--YRSPAVPALTKTLLEDIKKIF-----KTTSGTP---FLIPTTGTGAWESALTNTLSPGDRII 88 (401)
Q Consensus 21 ~~~v--~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~-----g~~~~~~---i~~~~g~t~a~~~~~~~~~~~gd~vl 88 (401)
++.+ ++++.+.... ...+.......++++.+++++ +.++ ++ +++++|+++|+..++.+++++||+|+
T Consensus 63 ~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl 141 (430)
T 2x5f_A 63 KMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSI-DNMSRPIVTNALTHGLSLVGDLFVNQDDTIL 141 (430)
T ss_dssp ECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHCTTCCG-GGBCCCEEESHHHHHHHHHHHHHCCTTCEEE
T ss_pred chhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccCcccCC-CccceEEEcCCchHHHHHHHHHHhCCCCEEE
Confidence 4444 7777665422 122322234568888888888 6654 45 89999999999999999999999999
Q ss_pred EEcCCcchHHHHHHHHH-cCCcEEEEeCCC-CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHh
Q 015729 89 SFLIGQFSLLWIDQQQR-LNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLL 163 (401)
Q Consensus 89 ~~~~~~~~~~~~~~~~~-~g~~~~~v~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~ 163 (401)
++.++|++.. ..++. .|++++.++.+. ++.+|++++++++++.. ++++++++++|+||||.+++ +++|.++|
T Consensus 142 ~~~p~y~~~~--~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~ 218 (430)
T 2x5f_A 142 LPEHNWGNYK--LVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYN-KDKVIMILNYPNNPTGYTPTHKEVTTIVEAI 218 (430)
T ss_dssp EESSCCTHHH--HHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHCC-SSEEEEEECSSCTTTCCCCCHHHHHHHHHHH
T ss_pred EcCCcCccHH--HHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhcC-CCCEEEEEcCCCCCCCCcCCHHHHHHHHHHH
Confidence 9999888764 55677 899999999865 35789999999997532 36789999999999999998 66777777
Q ss_pred hh---cCCCcEEEEecccccCcc------ee--ccCc-ccc---eEEEecCCCcccCCCc--ceEEEe---cHHHHHHhc
Q 015729 164 DE---YRHPALFLVDGVSSICAI------DF--RMDE-WGI---DVALTGSQKALSLPTG--MGIVCA---SPKALEASK 223 (401)
Q Consensus 164 ~~---~~~~~~li~D~a~~~~~~------~~--~~~~-~~~---di~~~s~~K~l~g~~g--~G~l~~---~~~~~~~~~ 223 (401)
++ +++|+++|+|++|+.+.. ++ +... .+. ++++.|.||+++ .+| +|++++ ++++.+.+.
T Consensus 219 ~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~riG~~~~~~~~~~~~~~l~ 297 (430)
T 2x5f_A 219 KALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFF-AWGFRVGFMTFGTSDQTTKEVLE 297 (430)
T ss_dssp HHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTT-CGGGCCEEEEEBCCCHHHHHHHH
T ss_pred HhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCC-CCCCCeEEEEEecCCHHHHHHHH
Confidence 76 236899999999975422 11 2222 345 788999999984 344 699999 988877665
Q ss_pred cCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHH-HHH-HhcHHHHHHHHHHHHHHHHHHHH----HcCCccc
Q 015729 224 TAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALD-LIF-EEGLENVIERHRRLGKATRLAVE----AWGLKNC 297 (401)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~-~~~-~~g~~~~~~~~~~~~~~l~~~L~----~~g~~~~ 297 (401)
... .....+ ..++++...++++.++++ ... ...+++.++++.++++++.+.|+ +.|+.+.
T Consensus 298 ~~~------------~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~ 363 (430)
T 2x5f_A 298 AKV------------KGLIRS--NISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQAY 363 (430)
T ss_dssp HHH------------HHHHHT--TTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTTEEEC
T ss_pred HHH------------hhhhhc--ccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCceee
Confidence 310 000000 123466666666667776 310 11245588888899999999998 4566554
Q ss_pred cCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 298 TQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.+ ..+.++++.++ +.+..++.+.|.+++||.+.+| ..+++||++.. .+++++++++++|+++++++
T Consensus 364 ~~----~~g~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g----~~~~iRis~~~-~~~e~i~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 364 DF----NSGYFMAIKVH-DVDPEALRKHLIDKYSIGVIAL----NATDIRIAFSC-VEKDDIPHVFDSIAKAIDDL 429 (430)
T ss_dssp CC----CBSSEEEEEES-SSCHHHHHHHHHHHHCEECEEC----SSSEEEEEGGG-SCGGGHHHHHHHHHHHHHHH
T ss_pred CC----CceEEEEeCCC-CCCHHHHHHHHHHhCCEEEecC----CCCeEEEEEec-CCHHHHHHHHHHHHHHHHhc
Confidence 43 24457888887 6688899999987349999987 35689998874 59999999999999998764
No 103
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.97 E-value=1.1e-29 Score=245.74 Aligned_cols=325 Identities=10% Similarity=0.059 Sum_probs=229.3
Q ss_pred cCChHHHHHHHccCcC-----C-CCCccHHHHHHHHHHHHHHHh----cCCCCceEEecCChhHHHHHHHhccCCCCCeE
Q 015729 18 VHIPDQVIRAMNRNNE-----D-YRSPAVPALTKTLLEDIKKIF----KTTSGTPFLIPTTGTGAWESALTNTLSPGDRI 87 (401)
Q Consensus 18 ~~~~~~v~~a~~~~~~-----~-~~~~~~~~~~~~l~~~la~~~----g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~v 87 (401)
.+.++.|++++.+... . ...+.......++++.+++++ +.++ +.+++++|+++++..+ .+++++||+|
T Consensus 81 ~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~g~~~~~-~~i~~t~G~~~al~~~-~~l~~~gd~V 158 (449)
T 3qgu_A 81 EPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFYGHAGRAA-DEIFISDGSKCDIARI-QMMFGSKPTV 158 (449)
T ss_dssp CCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHHTTTTCCG-GGEEEESCHHHHHHHH-HHHHCSSSCE
T ss_pred CCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHHcCCCCCH-HHEEEccCHHHHHHHH-HHHhCCCCEE
Confidence 4466777777666332 1 112333344678999999988 4444 4599999999999988 7888999999
Q ss_pred EEEcCCcchHHHHHHHHHcCCc----------EEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc--
Q 015729 88 ISFLIGQFSLLWIDQQQRLNFN----------VDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN-- 155 (401)
Q Consensus 88 l~~~~~~~~~~~~~~~~~~g~~----------~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~-- 155 (401)
+++.++|+++. ..++..|.+ ++.++.+.++.++++. + +. ++++++++++++||||.+++
T Consensus 159 l~~~p~~~~~~--~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~--~~~~~v~l~~p~NPtG~~~~~~ 229 (449)
T 3qgu_A 159 AVQDPSYPVYV--DTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDL-S----KA--KRTDIIFFCSPNNPTGAAATRA 229 (449)
T ss_dssp EEEESCCTHHH--HHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCG-G----GC--CCCSEEEEESSCTTTCCCCCHH
T ss_pred EEcCCCChhHH--HHHHHcCCcccccccccceeEEEecccccCCcCCh-h----Hc--CCCCEEEEeCCCCCCCCcCCHH
Confidence 99999988765 456777888 9999987654343321 1 11 36799999999999999987
Q ss_pred -hHHHHHHhhhcCCCcEEEEecccccCcce----ecc---C-cccceEEEecCCCccc-CCCcceEEEecHHHHHHhccC
Q 015729 156 -LSKVRKLLDEYRHPALFLVDGVSSICAID----FRM---D-EWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTA 225 (401)
Q Consensus 156 -l~~i~~l~~~~~~~~~li~D~a~~~~~~~----~~~---~-~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~ 225 (401)
+++|.++|++ +|+++|+|++|+.+... ..+ . ..+.++++.|.+|+++ ++.++|+++++++.++..
T Consensus 230 ~l~~l~~l~~~--~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~--- 304 (449)
T 3qgu_A 230 QLTELVNFARK--NGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYAN--- 304 (449)
T ss_dssp HHHHHHHHHHH--HTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTTCBCTT---
T ss_pred HHHHHHHHHHH--CCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHHHHhhh---
Confidence 6678888999 99999999999863321 111 1 1356899999999995 445689999988764320
Q ss_pred CCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCC
Q 015729 226 KSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFS 305 (401)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 305 (401)
...+........... .++++...+.++.++++......+++.++++.++++++.+.|+++|+++..+. .
T Consensus 305 -----~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~ 373 (449)
T 3qgu_A 305 -----GEPVHADWNRVMTTC--FNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEMGFSVYGGD----D 373 (449)
T ss_dssp -----SCBHHHHHHHHHHHS--CCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEESS----S
T ss_pred -----hhhHHHHHHHHhhcc--cCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeeeCCC----C
Confidence 001111111111111 22455655555555655422234678889999999999999999888776542 3
Q ss_pred ceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCC--CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 306 DTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLN--KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 306 ~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~--~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
+.++++.++ +.+..++++.|.+++||.+.+|.. ...++++||++.. +++++++++++|++++++
T Consensus 374 ~~~~~~~~~-~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~--~~e~i~~~l~~l~~~~~~ 439 (449)
T 3qgu_A 374 APYIWVGFP-GKPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFG--SRENILEAVRRFKEAYGK 439 (449)
T ss_dssp SSEEEEECT-TSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHC-
T ss_pred eeEEEEECC-CCCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 457888887 678889999888777999998843 2335789998654 999999999999998854
No 104
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.97 E-value=1.3e-28 Score=235.83 Aligned_cols=355 Identities=13% Similarity=0.105 Sum_probs=244.1
Q ss_pred cccccCCCcCChHHHHHHHccCcCCCC-----------C-ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHH
Q 015729 10 NHLFVPGPVHIPDQVIRAMNRNNEDYR-----------S-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESAL 77 (401)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~~~-----------~-~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~ 77 (401)
...+.+++.+.++.+++++.+...... + .........+++.+++++|.+.. +++++ +||+|+..++
T Consensus 27 ~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~-~i~~~-sGt~a~~~~~ 104 (417)
T 3n0l_A 27 GLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKFA-NVQPN-SGSQANQGVY 104 (417)
T ss_dssp SEECCTTCCCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEE-ECCCS-SHHHHHHHHH
T ss_pred CeeeecccCCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhCCCCc-ceEec-cHHHHHHHHH
Confidence 345566777779999999988652221 0 11234455677899999998653 35554 5589999999
Q ss_pred hccCCCCCeEEEEcCCcchHHH-HHHHHH--cCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccccc
Q 015729 78 TNTLSPGDRIISFLIGQFSLLW-IDQQQR--LNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN 154 (401)
Q Consensus 78 ~~~~~~gd~vl~~~~~~~~~~~-~~~~~~--~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~ 154 (401)
.+++++||+|+++.++|+++.. ...... .+..++.++.+.++.+|++++++++++ +++++|++++++| |...
T Consensus 105 ~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~---~~~~~v~~~~~~~--G~~~ 179 (417)
T 3n0l_A 105 AALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKK---EKPKLIVCGASAY--ARVI 179 (417)
T ss_dssp HHHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHH---HCCSEEEECCSSC--CSCC
T ss_pred HHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHh---cCCeEEEECCccc--CccC
Confidence 9999999999999998876541 112222 345566677776677899999999974 2468888877664 8999
Q ss_pred chHHHHHHhhhcCCCcEEEEecccccCcc-----eeccCcccceEEEecCCCcccCCCcceEEEec-HHHHHHhccCCCC
Q 015729 155 NLSKVRKLLDEYRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLPTGMGIVCAS-PKALEASKTAKSV 228 (401)
Q Consensus 155 ~l~~i~~l~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~-~~~~~~~~~~~~~ 228 (401)
|+++|.++|++ +|+++|+|++|+.+.. +.... +.|++++|.||++.|+.| |+++++ +++.+.+....
T Consensus 180 ~l~~i~~l~~~--~~~~li~Dea~~~g~~~~~~~~~~~~--~~di~~~s~sK~l~g~~~-G~~~~~~~~~~~~~~~~~-- 252 (417)
T 3n0l_A 180 DFAKFREIADE--IGAYLFADIAHIAGLVVAGEHPSPFP--YAHVVSSTTHKTLRGPRG-GIIMTNDEELAKKINSAI-- 252 (417)
T ss_dssp CHHHHHHHHHH--HTCEEEEECTTTHHHHHTTSSCCCTT--TCSEEEEESSTTTCSCSC-EEEEESCHHHHHHHHHHH--
T ss_pred CHHHHHHHHHH--cCCEEEEECccchhhhhcccCCCccc--cceEEEeeCccccCCCCe-eEEEECCHHHHHHHhhhh--
Confidence 99999999999 9999999999875543 11222 479999999999976664 999998 67766554311
Q ss_pred ccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCcee
Q 015729 229 RVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTV 308 (401)
Q Consensus 229 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~ 308 (401)
..+ ..++++...++++.+++......+++...++..++++++.+.|.+.|+++.... ....+
T Consensus 253 -------------~~~--~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~ 314 (417)
T 3n0l_A 253 -------------FPG--IQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDRKFKLVSDG---TDNHL 314 (417)
T ss_dssp -------------TTT--TCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGS---CSSSE
T ss_pred -------------CCc--ccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCceeccCC---CCceE
Confidence 011 133466767777777777655455778889999999999999998887765521 12346
Q ss_pred EEEEcC-CCCCHHHHHHHHHhhCCeEEccCCCC------CCCcEEEEeeccc----CCHHHHHHHHHHHHHHHHhcCCCC
Q 015729 309 TAVIVP-SHINSSEIVRRAWQRYNLSLGLGLNK------VAGKVFRIGHLGH----LNELQLLGCLAGVEMILKDVGYPV 377 (401)
Q Consensus 309 ~~~~~~-~~~~~~~l~~~L~~~~~i~v~~g~~~------~~~~~~Ri~~~~~----~~~~di~~~~~~i~~~l~~~~~~~ 377 (401)
+++.++ .+.+..++.+.|.++ ||.+.++..+ .....+|+++... .+++|+++++++|++++++... .
T Consensus 315 ~~~~~~~~~~~~~~~~~~l~~~-gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~-~ 392 (417)
T 3n0l_A 315 VLMSFLDREFSGKDADLALGNA-GITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDDVNN-E 392 (417)
T ss_dssp EEEECTTSSSCHHHHHHHHHHT-TEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTTTC-H
T ss_pred EEEEcccCCCCHHHHHHHHHHc-CeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhcccc-h
Confidence 667764 345778888888655 9998865422 2235699987542 5789999999999999986422 1
Q ss_pred CcchHHHHHHHHHHccCCCCC
Q 015729 378 KLGSGVAAASAYLQNNIPMIP 398 (401)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~ 398 (401)
+....+.....-+....|+-|
T Consensus 393 ~~~~~~~~~v~~~~~~~~~~~ 413 (417)
T 3n0l_A 393 KLQENIKQELKKLASNFIIYE 413 (417)
T ss_dssp HHHHHHHHHHHHHHTTCCCCS
T ss_pred hhHHHHHHHHHHHHhcCCCcc
Confidence 122235566667777777744
No 105
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.97 E-value=9.4e-29 Score=242.07 Aligned_cols=351 Identities=9% Similarity=0.038 Sum_probs=241.9
Q ss_pred CCcccccCCCcCChHHHHHHHccCcCC---C---CCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc-
Q 015729 8 GKNHLFVPGPVHIPDQVIRAMNRNNED---Y---RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT- 80 (401)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~~~---~---~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~- 80 (401)
+..|+.....++.++++++++.....+ + .++...++..++++.+++++|.++...+++++|||+|+..++.+.
T Consensus 100 ~~~yl~~~~~~~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ar 179 (497)
T 2qma_A 100 HPDCIAHLHTPPLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLAR 179 (497)
T ss_dssp STTBCSSSCCCCBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHH
T ss_pred CCCeeEeCCCCCcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHHH
Confidence 356787777788899988777543211 1 123345566678888999999875456999999999999887652
Q ss_pred ---C---------CC------CC-eEEEEcCCcchHHHHHHHHHcCC---cEEEEeCCCCCCCChHHHHHHHhccCCC--
Q 015729 81 ---L---------SP------GD-RIISFLIGQFSLLWIDQQQRLNF---NVDVVESDWGEGAKLDVLASKLAADTAH-- 136 (401)
Q Consensus 81 ---~---------~~------gd-~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~le~~~~~~~~~-- 136 (401)
+ .+ |+ .|+++..+|++.. ..++..|. +++.++.+.++.+|+++|+++++++...
T Consensus 180 ~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~--~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~ 257 (497)
T 2qma_A 180 DWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQ--KSASWMGLGEKAVMTVDANADGTMDITKLDEVIAQAKAEGL 257 (497)
T ss_dssp HHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHH--HHHHHTTSCGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTC
T ss_pred HHHHHhhcccchhhcccccccCCeEEEECCCchHHHH--HHHHHcCCCcccEEEEecCCCCcCCHHHHHHHHHHHHHCCC
Confidence 2 12 45 7888888888764 44555655 8999999888899999999999764211
Q ss_pred CceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceec----cCcc-cceEEEecCCCcccCCCcceE
Q 015729 137 TIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFR----MDEW-GIDVALTGSQKALSLPTGMGI 211 (401)
Q Consensus 137 ~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~----~~~~-~~di~~~s~~K~l~g~~g~G~ 211 (401)
++.++++++++|++|.+.|+++|.++|++ +|+++|+|++|+.+..+.+ .... ++|++++|+||+++++.++|+
T Consensus 258 ~~~~vv~~~~~~~tG~~~~l~~I~~l~~~--~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p~~~G~ 335 (497)
T 2qma_A 258 IPFAIVGTAGTTDHGAIDDLDFIADMAVK--HDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQTISCGA 335 (497)
T ss_dssp EEEEEEEEBSCTTTCCBCCHHHHHHHHHH--HTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCCSSCEE
T ss_pred cceEEEEcCCCCCCCCCCCHHHHHHHHHH--cCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCCcceEE
Confidence 24488889999999999999999999999 9999999999988766544 2223 689999999999988889999
Q ss_pred EEecHHH-HHHhccCCCCccccchHH--HHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 015729 212 VCASPKA-LEASKTAKSVRVFFDWKD--YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLA 288 (401)
Q Consensus 212 l~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~ 288 (401)
++++++. ++.+.. ...|..... ........ ...+.. ....+++++++.+..+++++..++..++++++.+.
T Consensus 336 l~~~~~~~~~~~~~---~~~yl~~~~~~~~~~~~~~--~~~~r~-~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~ 409 (497)
T 2qma_A 336 LLVNDKSNFKFLLH---HADYLNREHDELPNLVDKS--IATTKR-FDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADM 409 (497)
T ss_dssp EEESCGGGGGGGCC-------------------------CCSCC-CTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCHHHHHHhcC---CchhcCCccccCCCccccC--CCCCCc-hhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 9987654 332221 111110000 00000000 000011 11235666777766667888999999999999999
Q ss_pred HHHc-CCccccCCCccCCceeEEEEcCCC-CC----HHHHHHHHHhhCCeEEccCCCCCCCcEEEEee-cccCCHHHHHH
Q 015729 289 VEAW-GLKNCTQKEEWFSDTVTAVIVPSH-IN----SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGH-LGHLNELQLLG 361 (401)
Q Consensus 289 L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~-~~~~~~~di~~ 361 (401)
|+++ ++++..+. .. .+++|.++.. .+ ..++.+.|.++ |+.+.++.......++|+++ ...+|++|+++
T Consensus 410 L~~~~~~~~~~~~---~~-~~v~f~~~~~~~~~~~l~~~l~~~l~~~-G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~ 484 (497)
T 2qma_A 410 IRTNDQFELLAEP---SL-STVLFRATHETADLDELNKALRLEALTR-GIAVLGETIVDGKTALKFTILNPCLTTSDFES 484 (497)
T ss_dssp HHTCTTEEECSCC---SS-SEEEEEECCSSSCHHHHHHHHHHHHHHH-TSCBCEEEEETTEEEEEEECCCTTCCHHHHHH
T ss_pred HhhCCCeEEEcCC---Cc-eEEEEEEcCCccCHHHHHHHHHHHHHhC-CCEEEEeeEECCEEEEEEEecCCCCCHHHHHH
Confidence 9987 87775431 23 3666776432 12 23566677766 77765432222235799987 66889999999
Q ss_pred HHHHHHHHHHhc
Q 015729 362 CLAGVEMILKDV 373 (401)
Q Consensus 362 ~~~~i~~~l~~~ 373 (401)
++++|+++++++
T Consensus 485 ~~~~l~~~~~~~ 496 (497)
T 2qma_A 485 LLSKINMLAVEL 496 (497)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhh
Confidence 999999998764
No 106
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.97 E-value=6e-30 Score=247.74 Aligned_cols=329 Identities=12% Similarity=0.087 Sum_probs=236.4
Q ss_pred CCCCcccccCCCcCChHHHHHHHccC-----cC--C----CCCc--------cHHHHHHHHHHHHHHHhcCCCCceEEec
Q 015729 6 APGKNHLFVPGPVHIPDQVIRAMNRN-----NE--D----YRSP--------AVPALTKTLLEDIKKIFKTTSGTPFLIP 66 (401)
Q Consensus 6 ~~~~~~~~~~~p~~~~~~v~~a~~~~-----~~--~----~~~~--------~~~~~~~~l~~~la~~~g~~~~~~i~~~ 66 (401)
..+..|++.++.++.++.|++++... .. . .... ...+..+++++.+++++|.+.. ++++
T Consensus 78 ~~~~~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~--~~~t 155 (456)
T 2z67_A 78 MDTDKDPKSVRIGEREARTYSKIHEELSSGFCHGIGRSGNLVDPQPKASGASIMYALTNKILESFFKQLGLNVH--AIAT 155 (456)
T ss_dssp TBGGGCTTCEECSSCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCTTBHHHHHHHHHHHHHHHHHHHHTTCCCE--EEEE
T ss_pred ccccccccccccccccccccccccCccccccCCCccHHHHHHhhCcccccCcHHHHHHHHHHHHHHHHcCCCCC--EEEe
Confidence 34568999998888888877775541 10 0 0011 1445678899999999999763 8999
Q ss_pred CChh-HHHHHHHhccCC--CCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeC---CCCCCCChHHHHHHH-hccCCCCce
Q 015729 67 TTGT-GAWESALTNTLS--PGDRIISFLIGQFSLLWIDQQQRLNFNVDVVES---DWGEGAKLDVLASKL-AADTAHTIK 139 (401)
Q Consensus 67 ~g~t-~a~~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~~d~~~le~~~-~~~~~~~~~ 139 (401)
+|+| .++..++.++.. +++.|+++.++|++.. ..++..|++++.++. +.++.+|++++++++ +.....++.
T Consensus 156 ~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~--~~~~~~G~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 233 (456)
T 2z67_A 156 PISTGMSISLCLSAARKKYGSNVVIYPYASHKSPI--KAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRP 233 (456)
T ss_dssp SSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHH--HHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHHHTTCCE
T ss_pred CcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHH--HHHHHcCCCceEEEEeccCCCCCcCHHHHHHHHHHHhhCCCeE
Confidence 9999 466545544322 6778888988877743 567778999999887 566789999999999 421002567
Q ss_pred EEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcc---eeccCcc--cceEEEecCCCcccCCCcceEEEe
Q 015729 140 AICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAI---DFRMDEW--GIDVALTGSQKALSLPTGMGIVCA 214 (401)
Q Consensus 140 ~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~---~~~~~~~--~~di~~~s~~K~l~g~~g~G~l~~ 214 (401)
+++++.++|++|.+.|+++|.++|++ +|+++|+|+||+.... +.+.... ++|++++|+||++++|.|+|++++
T Consensus 234 ~vv~~~~nn~tG~i~~l~~I~~la~~--~g~~v~vD~A~~~~~~g~~~~~~~~~~~~~D~~~~s~hK~~~~p~g~G~l~~ 311 (456)
T 2z67_A 234 CVLSTLTFFPPRNSDDIVEIAKICEN--YDIPHIINGAYAIQNNYYLEKLKKAFKYRVDAVVSSSDKNLLTPIGGGLVYS 311 (456)
T ss_dssp EEEEESSCCTTBCCCCHHHHHHHHHH--HTCCEEEECTTTTTCHHHHHHHHHHHTSCCSEEEEEHHHHHCCCSSCEEEEE
T ss_pred EEEEeCCCCCCCCcCCHHHHHHHHHH--cCCcEEEECcchHHHHHhhHHHHHhhCCCCCEEEEcCCCCcCCCCCeEEEEE
Confidence 78888899999999999999999999 9999999998875433 3332222 799999999999888899999999
Q ss_pred -cHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-
Q 015729 215 -SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW- 292 (401)
Q Consensus 215 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~- 292 (401)
++++.+.+.+... |. .+....+++.+++..+...++++..++..++++++.+.|+++
T Consensus 312 ~~~~~~~~l~~~~~----------------g~-----~~~~~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~ 370 (456)
T 2z67_A 312 TDAEFIKEISLSYP----------------GR-----ASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLS 370 (456)
T ss_dssp SCHHHHHHHHTTSC----------------SC-----BCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHhhcCcCCC----------------CC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 5677666643211 11 111224567778877777788999999999999999999987
Q ss_pred ---CCccccCCCccCCceeEEEEc--CCCCCHHHHHHHHHhhCCe---EEc------cCCC--CCCCcEEEEeecccCCH
Q 015729 293 ---GLKNCTQKEEWFSDTVTAVIV--PSHINSSEIVRRAWQRYNL---SLG------LGLN--KVAGKVFRIGHLGHLNE 356 (401)
Q Consensus 293 ---g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~L~~~~~i---~v~------~g~~--~~~~~~~Ri~~~~~~~~ 356 (401)
|+.+..+. .+++|.+ ++ ...++.+.|.++ || .+. .|.. ....+++|+++..++|+
T Consensus 371 ~~~g~~v~~~~------~~v~~~~~~~~--~~~~l~~~L~~~-gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~ 441 (456)
T 2z67_A 371 KKTGGKFLDVE------SPIASCISVNS--DPVEIAAKLYNL-RVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRT 441 (456)
T ss_dssp HHSSCCBCCCC------CSSEEEEECSS--CHHHHHHHHHHT-TEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCH
T ss_pred cccCCEecCCC------CeEEEEEeccc--HHHHHHHHHHHc-CCCcceEEeecCccccccccccCcchhhhhhhcCCCH
Confidence 86665432 2334555 32 146888888876 64 342 1211 22346899998878899
Q ss_pred HHHHHHHHHHHHHH
Q 015729 357 LQLLGCLAGVEMIL 370 (401)
Q Consensus 357 ~di~~~~~~i~~~l 370 (401)
+|+|+++++|++++
T Consensus 442 eeid~~l~~L~~~~ 455 (456)
T 2z67_A 442 EDIVNSVSKLEKIL 455 (456)
T ss_dssp HHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998754
No 107
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.97 E-value=5.1e-30 Score=245.08 Aligned_cols=330 Identities=14% Similarity=0.077 Sum_probs=231.2
Q ss_pred CCCcccccCCCc-CChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHhc------CCCCceEEecCChhHHHHHHH
Q 015729 7 PGKNHLFVPGPV-HIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFK------TTSGTPFLIPTTGTGAWESAL 77 (401)
Q Consensus 7 ~~~~~~~~~~p~-~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g------~~~~~~i~~~~g~t~a~~~~~ 77 (401)
++...+..+-|. +.++.+++++.+.... ...+.......++++.++++++ .++.+++++++|+++|+..++
T Consensus 23 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~ 102 (410)
T 3e2y_A 23 PSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSI 102 (410)
T ss_dssp TTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHH
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHH
Confidence 333444444343 5678888888775432 1112111223456666666655 333245999999999999999
Q ss_pred hccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCC-----------CCCCChHHHHHHHhccCCCCceEEEEEec
Q 015729 78 TNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDW-----------GEGAKLDVLASKLAADTAHTIKAICIVHN 146 (401)
Q Consensus 78 ~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-----------~~~~d~~~le~~~~~~~~~~~~~i~~~~~ 146 (401)
.+++++||+|+++.++|+++. ..++..|++++.++.+. ++.+|+++++++++ +++++++++++
T Consensus 103 ~~~~~~gd~vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~----~~~~~v~~~~p 176 (410)
T 3e2y_A 103 QGLVDPGDEVIIMVPFYDCYE--PMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFS----SKTKAIILNTP 176 (410)
T ss_dssp HHHCCTTCEEEEEESCCTTHH--HHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCC----TTEEEEEEESS
T ss_pred HHhcCCCCEEEEeCCCchhhH--HHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcC----CCceEEEEeCC
Confidence 999999999999999887764 55677899999998762 34579999999886 36799999999
Q ss_pred CCCccccc---chHHHHHHhhhcCCCcEEEEecccccCcc----eecc---C-cccceEEEecCCCccc-CCCcceEEEe
Q 015729 147 ETATGVTN---NLSKVRKLLDEYRHPALFLVDGVSSICAI----DFRM---D-EWGIDVALTGSQKALS-LPTGMGIVCA 214 (401)
Q Consensus 147 ~n~tG~~~---~l~~i~~l~~~~~~~~~li~D~a~~~~~~----~~~~---~-~~~~di~~~s~~K~l~-g~~g~G~l~~ 214 (401)
+||||.++ ++++|.++|++ +|+++|+|++|+.+.. .... . ..+.++++.|.+|+++ ++.++|++++
T Consensus 177 ~nptG~~~~~~~l~~l~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~ 254 (410)
T 3e2y_A 177 HNPLGKVYTRQELQVIADLCVK--HDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIG 254 (410)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHH--HTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEEC
T ss_pred CCCCCcCcCHHHHHHHHHHHHH--cCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEE
Confidence 99999996 57889999999 9999999999975332 1111 1 2356688999999985 3445799999
Q ss_pred cHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHH------HHhcHHHHHHHHHHHHHHHHHH
Q 015729 215 SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLI------FEEGLENVIERHRRLGKATRLA 288 (401)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~------~~~g~~~~~~~~~~~~~~l~~~ 288 (401)
++++++.+... ... ..++.+...+.++.++++.. ....+++.+++++++++++.+.
T Consensus 255 ~~~~~~~~~~~----------------~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 316 (410)
T 3e2y_A 255 PAHLIKHLQTV----------------QQN--SFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRL 316 (410)
T ss_dssp CHHHHHHHHHH----------------HHT--TTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHH----------------HHh--hccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 99987766421 001 12345565555555665531 1223678888899999999999
Q ss_pred HHHcCCccccCCCccCCceeEEEEcCC---CCC--------HHHHHHHHHhhCCeEEccCCCCC-------CCcEEEEee
Q 015729 289 VEAWGLKNCTQKEEWFSDTVTAVIVPS---HIN--------SSEIVRRAWQRYNLSLGLGLNKV-------AGKVFRIGH 350 (401)
Q Consensus 289 L~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~--------~~~l~~~L~~~~~i~v~~g~~~~-------~~~~~Ri~~ 350 (401)
|+++|+.+..+. .+.++++.++. +.+ ..++...|.+++||.+.+|..+. ..+++||++
T Consensus 317 L~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~ 392 (410)
T 3e2y_A 317 LNSVGLKPIVPD----GGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCF 392 (410)
T ss_dssp HHTTTCEEEBCS----BSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEEC
T ss_pred HHHCCCeecCCC----ccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEE
Confidence 998888765542 34567776632 222 23777777655699999885432 247899986
Q ss_pred cccCCHHHHHHHHHHHHH
Q 015729 351 LGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 351 ~~~~~~~di~~~~~~i~~ 368 (401)
.. +++++++++++|++
T Consensus 393 ~~--~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 393 IK--KDSTLDAAEEIFRA 408 (410)
T ss_dssp CC--CHHHHHHHHHHHHT
T ss_pred cC--CHHHHHHHHHHHHh
Confidence 65 99999999999865
No 108
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.97 E-value=2.7e-29 Score=236.29 Aligned_cols=312 Identities=12% Similarity=0.062 Sum_probs=227.1
Q ss_pred CcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcch
Q 015729 17 PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFS 96 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~ 96 (401)
|...++.+++++.+.......+.. ....++++.+++++|.++. .+++++|+++|+..++.++ +||+|++..++|++
T Consensus 35 ~~~~~~~v~~a~~~~~~~~~~y~~-~~~~~l~~~la~~~~~~~~-~v~~~~g~~~al~~~~~~~--~gd~vl~~~p~y~~ 110 (364)
T 1lc5_A 35 PLGMPVSVKRALIDNLDCIERYPD-ADYFHLHQALARHHQVPAS-WILAGNGETESIFTVASGL--KPRRAMIVTPGFAE 110 (364)
T ss_dssp TTCCCHHHHHHHHHTGGGGGSCCC-TTCHHHHHHHHHHHTSCGG-GEEEESSHHHHHHHHHHHH--CCSEEEEEESCCTH
T ss_pred CCCCCHHHHHHHHHHHHHhhcCCC-CCHHHHHHHHHHHHCcCHH-HEEECCCHHHHHHHHHHHc--CCCeEEEeCCCcHH
Confidence 344678888888875432111111 2467999999999988653 4999999999999998877 67999999998887
Q ss_pred HHHHHHHHHcCCcEEEEeCCCCCCCC-hHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCCCcEE
Q 015729 97 LLWIDQQQRLNFNVDVVESDWGEGAK-LDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALF 172 (401)
Q Consensus 97 ~~~~~~~~~~g~~~~~v~~~~~~~~d-~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~l 172 (401)
.. ..++..|++++.++.+.+..++ ++++.+.+. ++++++++++|+||||.++| +++|.++|++ +|+++
T Consensus 111 ~~--~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~----~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~--~~~~l 182 (364)
T 1lc5_A 111 YG--RALAQSGCEIRRWSLREADGWQLTDAILEALT----PDLDCLFLCTPNNPTGLLPERPLLQAIADRCKS--LNINL 182 (364)
T ss_dssp HH--HHHHHTTCEEEEEECCGGGTTCCCTTHHHHCC----TTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHH--HTCEE
T ss_pred HH--HHHHHcCCeEEEEeCCcccccchhHHHHHhcc----CCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhh--cCcEE
Confidence 64 4567789999999987533344 354555443 36789999999999999998 8889999999 99999
Q ss_pred EEecccccCcc----eecc-CcccceEEEecCCCccc-CCCcceEEE-ecHHHHHHhccCCCCccccchHHHHHHhhcCC
Q 015729 173 LVDGVSSICAI----DFRM-DEWGIDVALTGSQKALS-LPTGMGIVC-ASPKALEASKTAKSVRVFFDWKDYIKFYNLGT 245 (401)
Q Consensus 173 i~D~a~~~~~~----~~~~-~~~~~di~~~s~~K~l~-g~~g~G~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 245 (401)
|+|++|+.+.. ..+. ...+.++++.|.||+++ ++.++|+++ .++++.+.+.....
T Consensus 183 i~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~------------------ 244 (364)
T 1lc5_A 183 ILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQM------------------ 244 (364)
T ss_dssp EEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHHSC------------------
T ss_pred EEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHHHHhCC------------------
Confidence 99999985432 1222 33567899999999985 233469999 89988776653210
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCCCHHHHHH
Q 015729 246 FWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVR 324 (401)
Q Consensus 246 ~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 324 (401)
.++.+...++++.++++. ...+++.++++.++++++.+.|+++ |+.+..+ .+.++++.+++ +..++.+
T Consensus 245 --~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-----~g~~~~~~~~~--~~~~l~~ 313 (364)
T 1lc5_A 245 --PWSVNALAALAGEVALQD--SAWQQATWHWLREEGARFYQALCQLPLLTVYPG-----RANYLLLRCER--EDIDLQR 313 (364)
T ss_dssp --TTCSCHHHHHHHHHGGGC--HHHHHHHHHHHHHHHHHHHHHHHTSTTEEECCC-----SSSEEEEEESC--TTCCHHH
T ss_pred --CCCCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHhcCCCCEECCC-----CCeEEEEECCC--cHHHHHH
Confidence 224666655666666654 2346778888899999999999887 7765432 22456778764 3457888
Q ss_pred HHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 325 RAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 325 ~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.|.++ ||.+.++..+ ..++++||++. +++|+++++++|+++++++
T Consensus 314 ~l~~~-gi~v~~g~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~~~~~~ 360 (364)
T 1lc5_A 314 RLLTQ-RILIRSCANYPGLDSRYYRVAIR---SAAQNERLLAALRNVLTGI 360 (364)
T ss_dssp HHHTT-TEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHC---
T ss_pred HHHHC-CcEEeeCcccCCCCCCEEEEEeC---CHHHHHHHHHHHHHHhhcc
Confidence 88876 9999988543 23578999853 6889999999999887654
No 109
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.97 E-value=3.6e-29 Score=233.76 Aligned_cols=325 Identities=13% Similarity=0.087 Sum_probs=222.0
Q ss_pred cccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEc
Q 015729 12 LFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (401)
Q Consensus 12 ~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~ 91 (401)
+.......+++.+++++.+.......+.......++++.+++++|.+. +++++||++|+..++.+++++||+|+++.
T Consensus 8 ~~~~~~~~p~~~~~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~---~~~~~~gt~a~~~~~~~~~~~gd~Vl~~~ 84 (347)
T 1jg8_A 8 LRSDTVTKPTEEMRKAMAQAEVGDDVYGEDPTINELERLAAETFGKEA---ALFVPSGTMGNQVSIMAHTQRGDEVILEA 84 (347)
T ss_dssp CSCGGGCCCCHHHHHHHHTCCCCCGGGTCCHHHHHHHHHHHHHHTCSE---EEEESCHHHHHHHHHHHHCCTTCEEEEET
T ss_pred eccccCCCCCHHHHHHHhcCCCCCcccCCChHHHHHHHHHHHHhCCce---EEEecCcHHHHHHHHHHhcCCCCEEEEcC
Confidence 333333446678999987643222123334567899999999999753 78888999999988888899999999999
Q ss_pred CCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccC--CCCceEEEEEecCCCc-ccccch---HHHHHHhh
Q 015729 92 IGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT--AHTIKAICIVHNETAT-GVTNNL---SKVRKLLD 164 (401)
Q Consensus 92 ~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~--~~~~~~i~~~~~~n~t-G~~~~l---~~i~~l~~ 164 (401)
++|++.. ....++..|++++.+ .+.++.+|++++++++++.. .++++++++++++||| |.+.|. ++|.++|+
T Consensus 85 ~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~ 163 (347)
T 1jg8_A 85 DSHIFWYEVGAMAVLSGVMPHPV-PGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAK 163 (347)
T ss_dssp TCHHHHSSTTHHHHHTCCEEEEE-CEETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHH
T ss_pred cchhhhccccchhhccCeEEEEe-cCCCCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHH
Confidence 9876543 123567789999988 55566689999999986421 0257999999999999 999874 67889999
Q ss_pred hcCCCcEEEEecccccCcc---eeccC--cccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHH
Q 015729 165 EYRHPALFLVDGVSSICAI---DFRMD--EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIK 239 (401)
Q Consensus 165 ~~~~~~~li~D~a~~~~~~---~~~~~--~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (401)
+ +|+++|+|++|.++.. ..+.. ..+.|.+++|.||+++++.| ++++.++++++++...+ .
T Consensus 164 ~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G-~~~~~~~~~~~~~~~~~------------~ 228 (347)
T 1jg8_A 164 E--HGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVG-SVVVGDRDFIERARKAR------------K 228 (347)
T ss_dssp H--HTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSSC-EEEEECHHHHHHHHHHH------------H
T ss_pred H--CCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCCce-EEEEcCHHHHHHHHHHH------------H
Confidence 9 9999999998754321 11111 12578888899999965543 46777887766553210 0
Q ss_pred HhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCC-CCC
Q 015729 240 FYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS-HIN 318 (401)
Q Consensus 240 ~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~ 318 (401)
.+ .+. ...+....++...+++. ..+. .++..++++++.+.|+++|+++.... . .. .++++.++. +.+
T Consensus 229 ~~-~~~---~~~~~~~~~~~~~~l~~----~~~~-~~~~~~~~~~l~~~L~~~~~~~~~~~-~-~~-~~~~~~~~~~~~~ 296 (347)
T 1jg8_A 229 ML-GGG---MRQAGVLAAAGIIALTK----MVDR-LKEDHENARFLALKLKEIGYSVNPED-V-KT-NMVILRTDNLKVN 296 (347)
T ss_dssp HH-TCC---CSSTHHHHHHHHHHHHH----SSTT-HHHHHHHHHHHHHHHHHHTCBCCGGG-C-CS-SEEEEECTTSSSC
T ss_pred Hc-CCc---hhHHHHHHHHHHHHHHH----HHHH-HHHHHHHHHHHHHHHHhcCceeccCC-C-cc-eEEEEEcccccCC
Confidence 11 111 01222222222233332 1122 23344567888888887776643211 1 23 467788864 567
Q ss_pred HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 319 SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 319 ~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
..++.+.|.++ ||.++++. .+++|+++...++++|+++++++|++++++
T Consensus 297 ~~~~~~~l~~~-gi~v~~~~----~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~ 345 (347)
T 1jg8_A 297 AHGFIEALRNS-GVLANAVS----DTEIRLVTHKDVSRNDIEEALNIFEKLFRK 345 (347)
T ss_dssp HHHHHHHHHHH-TEECEEEE----TTEEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC-CCEEecCC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 88999999866 99988652 458999887788999999999999998865
No 110
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.97 E-value=1.4e-29 Score=240.61 Aligned_cols=337 Identities=11% Similarity=0.063 Sum_probs=233.7
Q ss_pred CcccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc-CCCCCeE
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPGDRI 87 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~-~~~gd~v 87 (401)
+...+..++..+++++++++.+...............++++.+++++|.+ .+++++|||+|+..++.++ +++||+|
T Consensus 23 ~~~~l~~~~p~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~---~~i~~~~gt~al~~~l~~~~~~~gd~v 99 (391)
T 3dr4_A 23 DLPRISVAAPRLDGNERDYVLECMDTTWISSVGRFIVEFEKAFADYCGVK---HAIACNNGTTALHLALVAMGIGPGDEV 99 (391)
T ss_dssp -----CCCCCCCCSSHHHHHHHHHHHTCCSSCSHHHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHHHHTCCTTCEE
T ss_pred CCceeccCCCCCCHHHHHHHHHHHHcCCccCCChHHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHcCCCCcCEE
Confidence 34555666667778888888774433222224577889999999999987 3888999999999999888 8999999
Q ss_pred EEEcCCcchHHHHHHHHHcCCcEEEEeCC-CCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhc
Q 015729 88 ISFLIGQFSLLWIDQQQRLNFNVDVVESD-WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEY 166 (401)
Q Consensus 88 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~ 166 (401)
+++.++|++.. ..++..|++++.++.+ .++.+|++++++++++ ++++++ ++||||...|+++|.++|++
T Consensus 100 l~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~v~---~~n~tG~~~~~~~i~~l~~~- 169 (391)
T 3dr4_A 100 IVPSLTYIASA--NSVTYCGATPVLVDNDPRTFNLDAAKLEALITP----RTKAIM---PVHLYGQICDMDPILEVARR- 169 (391)
T ss_dssp EEESSSCTHHH--HHHHHTTCEEEEECBCTTTCSBCGGGSGGGCCT----TEEEEC---CBCGGGCCCCHHHHHHHHHH-
T ss_pred EECCCchHHHH--HHHHHCCCEEEEEecCccccCcCHHHHHHhcCC----CceEEE---EECCCCChhhHHHHHHHHHH-
Confidence 99999988875 4567789999999988 4567899999998863 567776 45799999999999999999
Q ss_pred CCCcEEEEecccccCcceecc--Ccc-cceEEEecCCCcccCCCcceEEEecH-HHHHHhccCCCCccccchHHHHHHhh
Q 015729 167 RHPALFLVDGVSSICAIDFRM--DEW-GIDVALTGSQKALSLPTGMGIVCASP-KALEASKTAKSVRVFFDWKDYIKFYN 242 (401)
Q Consensus 167 ~~~~~li~D~a~~~~~~~~~~--~~~-~~di~~~s~~K~l~g~~g~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (401)
+|+++|+|++|+.|....+. ... .+++..+|.+|+++++. .|+++.++ ++.+.+............ .+ ....
T Consensus 170 -~~~~li~D~a~~~g~~~~~~~~~~~~di~~~S~s~~K~l~~g~-gg~~~~~~~~~~~~~~~~~~~g~~~~~-~~-~~~~ 245 (391)
T 3dr4_A 170 -HNLLVIEDAAEAVGATYRGKKSGSLGDCATFSFFGNAIITTGE-GGMITTNDDDLAAKMRLLRGQGMDPNR-RY-WFPI 245 (391)
T ss_dssp -TTCEEEEECTTCTTCEETTEETTSSSSEEEEECBTTSSSCCBS-CEEEEESCHHHHHHHHHHHBTTCCTTS-TT-CCSS
T ss_pred -cCCEEEEECcccccceECCeeecccCCEEEEECCCCCcCCcCC-eEEEEECCHHHHHHHHHHHhcCCCCCC-cc-cccc
Confidence 99999999999987653321 111 24444555889997644 47777664 454444321110000000 00 0000
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccC---CCccCCceeEEEEcCC--CC
Q 015729 243 LGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQ---KEEWFSDTVTAVIVPS--HI 317 (401)
Q Consensus 243 ~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~---~~~~~~~~~~~~~~~~--~~ 317 (401)
.|. .... ..+.+++......++++..++.+++.+++.+.|.++|+.+... ......+.++++.+++ +.
T Consensus 246 ~g~--~~~~-----~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 318 (391)
T 3dr4_A 246 VGF--NYRM-----TNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARLGNRVTKPHVALTGRHVFWMYTVRLGEGLST 318 (391)
T ss_dssp CCC--BCBC-----CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHGGGTTSEECCCCCTTSCCCCSSEEEEECSSCSS
T ss_pred ccc--ccCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccCcCCCCCCcceeEEEEEEECCccch
Confidence 010 1112 2344455554555678888999999999999998887776543 2222334456777765 67
Q ss_pred CHHHHHHHHHhhCCeEEccCCCCC--------------------CCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 318 NSSEIVRRAWQRYNLSLGLGLNKV--------------------AGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 318 ~~~~l~~~L~~~~~i~v~~g~~~~--------------------~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
+..++.+.|.++ ||.+++++.+. ....+|++++..+|++|+++++++|++++
T Consensus 319 ~~~~l~~~L~~~-GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 319 TRDQVIKDLDAL-GIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp CHHHHHHHHHHT-TCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHC-CCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 788999999876 99998775210 12469999999999999999999998653
No 111
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.97 E-value=1.8e-29 Score=236.56 Aligned_cols=327 Identities=11% Similarity=0.051 Sum_probs=230.2
Q ss_pred CcccccCCCcCChHHHHHHHccCcCCC-CCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeE
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNEDY-RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRI 87 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~-~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~v 87 (401)
-.++....+.+.++.+++++.+....+ ..+...+...++++.+++++| + +..+++++|||+|+..++.+++++||+|
T Consensus 9 ~id~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~g-~-~~~v~~~~~gt~a~~~al~~~~~~gd~v 86 (356)
T 1v72_A 9 ALGFSSDNIAGASPEVAQALVKHSSGQAGPYGTDELTAQVKRKFCEIFE-R-DVEVFLVPTGTAANALCLSAMTPPWGNI 86 (356)
T ss_dssp CCBCSCGGGCCCCHHHHHHHHHTTSSCCCSTTCSHHHHHHHHHHHHHHT-S-CCEEEEESCHHHHHHHHHHTSCCTTEEE
T ss_pred eEeeccCCccCCCHHHHHHHHhhccCcccccccchHHHHHHHHHHHHhC-C-CCcEEEeCCccHHHHHHHHHhcCCCCEE
Confidence 334444456677899999998865332 233345678899999999999 3 3348999999999999999988999999
Q ss_pred EEEcCCcchHHHHHHHHHc--CCcEEEEeCCCCCCCChHHHHH-HHhcc---CCCCceEEEEEecCCCccccc---chHH
Q 015729 88 ISFLIGQFSLLWIDQQQRL--NFNVDVVESDWGEGAKLDVLAS-KLAAD---TAHTIKAICIVHNETATGVTN---NLSK 158 (401)
Q Consensus 88 l~~~~~~~~~~~~~~~~~~--g~~~~~v~~~~~~~~d~~~le~-~~~~~---~~~~~~~i~~~~~~n~tG~~~---~l~~ 158 (401)
+++.++|++......+... |++++.++.+ ++.+|++++++ ++++. ...++++|++++++| ||.++ ++++
T Consensus 87 i~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~l~~ 164 (356)
T 1v72_A 87 YCHPASHINNDECGAPEFFSNGAKLMTVDGP-AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLDEIEA 164 (356)
T ss_dssp EECTTSHHHHSSTTHHHHHTTSCEEEECCCG-GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHHHHH
T ss_pred EEcCccchhhhhchHHHHHhCCcEEEEecCC-CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHHHHHH
Confidence 9998877665311114445 8999988875 46789999999 88641 112579999999876 99955 5788
Q ss_pred HHHHhhhcCCCcEEEEecccccCcc---eeccCc----ccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccc
Q 015729 159 VRKLLDEYRHPALFLVDGVSSICAI---DFRMDE----WGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVF 231 (401)
Q Consensus 159 i~~l~~~~~~~~~li~D~a~~~~~~---~~~~~~----~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~ 231 (401)
|.++|++ +|+++|+|++|..+.. ...... .+.|++++|.||+ +++.|+|+++.++++.+++...
T Consensus 165 i~~~~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g~~~~~~~~~~~~~~~------ 235 (356)
T 1v72_A 165 IGDVCKS--SSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAAEAIVLFNTSLATEMSYR------ 235 (356)
T ss_dssp HHHHHHH--TTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSCEEEEESSGGGHHHHHHH------
T ss_pred HHHHHHH--cCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCccEEEEECHHHHhhHHHH------
Confidence 9999999 9999999999864321 111111 3678999999998 5566767998888887665421
Q ss_pred cchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEE
Q 015729 232 FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTA 310 (401)
Q Consensus 232 ~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~ 310 (401)
.. ..|. ...... .++.++++.+.+..+.+..++..++++++.+.|+++ |+++..+. ...+++
T Consensus 236 -------~~-~~~~--~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~----~~~~~~ 298 (356)
T 1v72_A 236 -------RK-RAGH--LSSKMR---FLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGT----EANILF 298 (356)
T ss_dssp -------HH-HTTC--CCSSTH---HHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESCC----CSSEEE
T ss_pred -------hh-ccCc--hhhhHH---HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEccCC----CccEEE
Confidence 00 0121 111121 233334444444335567788889999999999885 77765432 234666
Q ss_pred EEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 311 VIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 311 ~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+.++ .++.+.|.++ ||.+.+|... ++++|+++...++++|+++++++|++++++.
T Consensus 299 ~~~~-----~~~~~~l~~~-gi~v~~g~~~--~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~ 353 (356)
T 1v72_A 299 CRLD-----SAMIDALLKA-GFGFYHDRWG--PNVVRFVTSFATTAEDVDHLLNQVRLAADRT 353 (356)
T ss_dssp EEEC-----HHHHHHHHHT-TCBCBCSSSS--TTEEEEECCTTCCHHHHHHHHHHHHHTC---
T ss_pred EEcC-----HHHHHHHHhc-CeEEeccccC--CCeEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 7774 3788888766 9999887532 6789999877789999999999999887653
No 112
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.97 E-value=1.8e-28 Score=238.47 Aligned_cols=340 Identities=13% Similarity=0.104 Sum_probs=236.7
Q ss_pred CCCcCChHHHHHHHccCcCCCC-------CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc----CCC
Q 015729 15 PGPVHIPDQVIRAMNRNNEDYR-------SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT----LSP 83 (401)
Q Consensus 15 ~~p~~~~~~v~~a~~~~~~~~~-------~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~----~~~ 83 (401)
.+.....+++++++........ .....+...++++.+++++|.+. .+++++||++|+..++.++ .++
T Consensus 73 ~~~~~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~--~~~~~~ggt~a~~~al~~~~~~~~~~ 150 (474)
T 1wyu_B 73 SCTMKYNPKLHEEAARLFADLHPYQDPRTAQGALRLMWELGEYLKALTGMDA--ITLEPAAGAHGELTGILIIRAYHEDR 150 (474)
T ss_dssp TTCCCCCCHHHHHHHHTTSSCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE--EECCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred cccccCCHHHHHHHHHHHHhcCCCCchhhChHHHHHHHHHHHHHHHHHCCCc--eeecChHHHHHHHHHHHHHHHHHHhc
Confidence 3334455666666665422111 22345678899999999999875 3678899999998755442 357
Q ss_pred CC-----eEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccc-cchH
Q 015729 84 GD-----RIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVT-NNLS 157 (401)
Q Consensus 84 gd-----~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~-~~l~ 157 (401)
|| +|+++.+.|.++. ..++..|++++.++.+.++.+|+++|++++++ ++++|+++++ |++|.+ .+++
T Consensus 151 Gd~~~r~~Vlv~~~~h~~~~--~~~~~~G~~vv~v~~~~~~~~d~~~L~~~i~~----~t~~v~~~~p-n~~G~~~~~l~ 223 (474)
T 1wyu_B 151 GEGRTRRVVLVPDSAHGSNP--ATASMAGYQVREIPSGPEGEVDLEALKRELGP----HVAALMLTNP-NTLGLFERRIL 223 (474)
T ss_dssp TCTTTCCEEEEETTSCTHHH--HHHHHTTCEEEEECBCTTSSBCHHHHHHHCST----TEEEEEECSS-CTTSCCCTTHH
T ss_pred CCccCCCEEEEeCCcChhhH--HHHHHCCCEEEEecCCCCCCcCHHHHHHhhCC----CceEEEEECC-CCCcccCCCHH
Confidence 77 9999998877654 45778899999999988888999999999974 5689999986 689998 6999
Q ss_pred HHHHHhhhcCCCcEEEEecccccCcc-eeccCcccceEEEecCCCcccCCC-----cceEEEecHHHHHHhccCC----C
Q 015729 158 KVRKLLDEYRHPALFLVDGVSSICAI-DFRMDEWGIDVALTGSQKALSLPT-----GMGIVCASPKALEASKTAK----S 227 (401)
Q Consensus 158 ~i~~l~~~~~~~~~li~D~a~~~~~~-~~~~~~~~~di~~~s~~K~l~g~~-----g~G~l~~~~~~~~~~~~~~----~ 227 (401)
+|.++|++ +|+++|+|++|+.+.. ..+...+++|++++|+||+++++. |+|++++++++.+.+.... .
T Consensus 224 ~i~~l~~~--~g~~li~Dea~~~~~~g~~~~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g 301 (474)
T 1wyu_B 224 EISRLCKE--AGVQLYYDGANLNAIMGWARPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGE 301 (474)
T ss_dssp HHHHHHHH--HTCEEEEEGGGGGGTTTTCCHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECS
T ss_pred HHHHHHHH--cCCEEEEeCchhhhhccCCCcccCCCcEEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeeeccC
Confidence 99999999 9999999999975543 223344579999999999997653 6899999998876664210 0
Q ss_pred CccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCce
Q 015729 228 VRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDT 307 (401)
Q Consensus 228 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 307 (401)
..+..++. .... .+....++.+...+.++.+.+..+..+++++..+++.++++++.+.|+++|+++..... ...
T Consensus 302 ~~~~~~~~-~~~~--~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~--~~~- 375 (474)
T 1wyu_B 302 EGFYLDFD-RPKS--IGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKGYRVPYDGP--SMH- 375 (474)
T ss_dssp SCEEEECC-CTTC--CCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCSSCSS--CCS-
T ss_pred CeeEeccc-Cccc--CcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcEecCCCC--cce-
Confidence 01111100 0000 00011122444444444445544445567778999999999999999988777633211 111
Q ss_pred eEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC-CCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 308 VTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK-VAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 308 ~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~-~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.+++.++.+.+..++.++|.++ ||.+.....+ ..++++||++...++++|+++++++|++++++
T Consensus 376 ~~~~~~~~~~~~~~l~~~L~~~-Gi~~~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 376 EFVAQPPEGFRALDLAKGLLEL-GFHPPTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp CEEEBCSTTCCHHHHHHHHHHT-TCCCCEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred EEEEEcCCCCCHHHHHHHHHHC-CccccccccccccCCEEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 1334555566788999999877 8875322221 12578999988888999999999999998865
No 113
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.97 E-value=3.8e-29 Score=243.55 Aligned_cols=353 Identities=10% Similarity=-0.000 Sum_probs=245.2
Q ss_pred CcccccCCCcCChHHHHHHHccCcCC-----CCCccHHHHHHHHHHHHHHHhcCCCCc---------eEEecCChhHHHH
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNED-----YRSPAVPALTKTLLEDIKKIFKTTSGT---------PFLIPTTGTGAWE 74 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~~---------~i~~~~g~t~a~~ 74 (401)
+.+.+.++|...+..+.+.+....+. ..++...++..++.+.+++++|.+... ..++++|||+|+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~ 159 (481)
T 4e1o_A 80 HMHAYYPALTSWPSLLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTL 159 (481)
T ss_dssp TBCSSSCCCCCHHHHHHHHHHHHHCCCCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHH
T ss_pred CeeEeCCCCCCHHHHHHHHHHHHhCcccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHH
Confidence 55667777766665555555442211 124455667778888889999987532 4789999999998
Q ss_pred HHHhccC-------------------CCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCC
Q 015729 75 SALTNTL-------------------SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTA 135 (401)
Q Consensus 75 ~~~~~~~-------------------~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~ 135 (401)
.++.+.. .+++.|+++...|++.. +.++..|++++.++++.++.+|+++|+++++++..
T Consensus 160 ~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~--~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~ 237 (481)
T 4e1o_A 160 IALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVE--KAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQ 237 (481)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHH--HHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHH--HHHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHh
Confidence 8775432 15678899999888764 45667899999999988889999999999976421
Q ss_pred --CCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCccee---ccCccc---ceEEEecCCCcccCCC
Q 015729 136 --HTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDF---RMDEWG---IDVALTGSQKALSLPT 207 (401)
Q Consensus 136 --~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~---~~~~~~---~di~~~s~~K~l~g~~ 207 (401)
..+.++++++++|++|.+.|+++|.++|++ +|+++|+|++|+.+.... .....+ +|++++++||++++|.
T Consensus 238 ~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~--~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~ 315 (481)
T 4e1o_A 238 RGLVPVFVCATLGTTGVCAFDCLSELGPICAR--EGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHF 315 (481)
T ss_dssp TTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHH--HTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCS
T ss_pred CCCCcEEEEEecCCCCCcCcCCHHHHHHHHHH--cCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCC
Confidence 126788999999999999999999999999 999999999998764322 111113 5999999999999999
Q ss_pred cceEEEecHHHH-HHhccCCCCccccchHH-HHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHH
Q 015729 208 GMGIVCASPKAL-EASKTAKSVRVFFDWKD-YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKAT 285 (401)
Q Consensus 208 g~G~l~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l 285 (401)
|+|+++++++.. .+.......+....... ........ ...+.. .....+++++..+..+|+++..++..++++++
T Consensus 316 g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~--~~~~r~-~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l 392 (481)
T 4e1o_A 316 DCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFMHWQ--IPLSRR-FRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYF 392 (481)
T ss_dssp SCEEEEESBHHHHHTTTCCCCGGGCCTTTTTSCCGGGGS--SSSCCC-CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeCHHHHHHHhcCCchhccCcccCCCCCccccc--ccCCCC-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 999998887643 32222111111000000 00000000 011111 23467788888888888999999999999999
Q ss_pred HHHHHHc-CCccccCCCccCCceeEEEEcCC-CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecc-cCCHHHHHHH
Q 015729 286 RLAVEAW-GLKNCTQKEEWFSDTVTAVIVPS-HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG-HLNELQLLGC 362 (401)
Q Consensus 286 ~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~-~~~~~di~~~ 362 (401)
.+.|+++ |+++..+. .. .+++|.++. +....++.+.|.++..+.+.++... ...++|+++.. .+|++||+++
T Consensus 393 ~~~L~~~~g~~~~~~~---~~-~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-g~~~lR~~~~~~~tt~~di~~~ 467 (481)
T 4e1o_A 393 ESLVRNDPSFEIPAKR---HL-GLVVFRLKGPNSLTENVLKEIAKAGRLFLIPATIQ-DKLIIRFTVTSQFTTRDDILRD 467 (481)
T ss_dssp HHHHHTCTTEECCSCC---CS-SEEEEEESSCHHHHHHHHHHHHHHCSSBCEEEEET-TEEEEEEECCCTTCCHHHHHHH
T ss_pred HHHHhcCCCeEEecCC---ce-eEEEEEeCCchHHHHHHHHHHHhCCeEEEEeeEEC-CEEEEEEEeCCCCCCHHHHHHH
Confidence 9999997 88886532 22 466777742 1235678888887733554444321 23569998765 4589999999
Q ss_pred HHHHHHHHHhc
Q 015729 363 LAGVEMILKDV 373 (401)
Q Consensus 363 ~~~i~~~l~~~ 373 (401)
+++|+++++++
T Consensus 468 ~~~i~~~~~~l 478 (481)
T 4e1o_A 468 WNLIRDAATLI 478 (481)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988754
No 114
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.97 E-value=3.1e-28 Score=232.39 Aligned_cols=333 Identities=14% Similarity=0.089 Sum_probs=238.1
Q ss_pred CcccccCCCcCChHHHHHHHccCcCC-C-CC---c----cHH---HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHH
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNED-Y-RS---P----AVP---ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESA 76 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~-~-~~---~----~~~---~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~ 76 (401)
+.+.+..+..++++.+++++.+.... . .. . ... .....+++.+++++|.++. .+++++|++|+..+
T Consensus 24 ~~i~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~~~--~i~~~sGt~a~~~~ 101 (407)
T 2dkj_A 24 EGLELIASENFVSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAWA--NVQPHSGSQANMAV 101 (407)
T ss_dssp TSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEE--ECCCSSHHHHHHHH
T ss_pred cceeeccCCCCCCHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCCcc--eEEecchHHHHHHH
Confidence 34556666566699999999886532 1 10 1 111 2222356799999998742 35556678899999
Q ss_pred HhccCCCCCeEEEEcCCcchHH-HHHHHHHcCC--cEEEEeCCC-CCCCChHHHHHHHhccCCCCceEEEEEecCCCccc
Q 015729 77 LTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNF--NVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGV 152 (401)
Q Consensus 77 ~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~--~~~~v~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~ 152 (401)
+.+++++||+|+++.++|+++. ....++..|. +.+.++.++ ++.+|++++++.+++ .+++++++++++|| .
T Consensus 102 ~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~~v~~~~p~~~--~ 176 (407)
T 2dkj_A 102 YMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALE---HRPKVIVAGASAYP--R 176 (407)
T ss_dssp HHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHH---HCCSEEEECCSSCC--S
T ss_pred HHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhh---cCCeEEEEeccccC--C
Confidence 9888999999999999887662 0122233444 344444343 567899999999974 24688888778876 6
Q ss_pred ccchHHHHHHhhhcCCCcEEEEecccccCcceeccCc---ccceEEEecCCCcccCCCcceEEEec-HHHHHHhccCCCC
Q 015729 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDE---WGIDVALTGSQKALSLPTGMGIVCAS-PKALEASKTAKSV 228 (401)
Q Consensus 153 ~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~---~~~di~~~s~~K~l~g~~g~G~l~~~-~~~~~~~~~~~~~ 228 (401)
..|+++|.++|++ +|+++|+|++|+.|....+... ..+|++++|.||+++|+.+ |+++++ +++.+.+.....
T Consensus 177 ~~~l~~i~~l~~~--~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~-G~~~~~~~~~~~~l~~~~~- 252 (407)
T 2dkj_A 177 FWDFKAFREIADE--VGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRG-GLILSNDPELGKRIDKLIF- 252 (407)
T ss_dssp CCCHHHHHHHHHH--HTCEEEEECTTTHHHHHTTCSCCCTTTCSEEEEESSGGGCCCSC-EEEEESCHHHHHHHHHHHT-
T ss_pred CCCHHHHHHHHHH--cCCEEEEEccccccccccCccCCccccccEEEEeccccCCCCCc-eEEEECCHHHHHHHHhhhc-
Confidence 7899999999999 9999999999987433222110 1379999999999987775 999999 788776643210
Q ss_pred ccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCcee
Q 015729 229 RVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTV 308 (401)
Q Consensus 229 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~ 308 (401)
.+..++++...++++.++++.....++++..++..++++++.+.|+++|+++..+. ..+.+
T Consensus 253 ----------------~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~ 313 (407)
T 2dkj_A 253 ----------------PGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRGYRIVTGG---TDNHL 313 (407)
T ss_dssp ----------------TTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGS---CSSSE
T ss_pred ----------------ccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCceeecCC---CCceE
Confidence 11133466666667788888766556788999999999999999999888776421 23457
Q ss_pred EEEEcCC-CCCHHHHHHHHHhhCCeEEccCCCC------CCCcEEEEeeccc----CCHHHHHHHHHHHHHHHHh
Q 015729 309 TAVIVPS-HINSSEIVRRAWQRYNLSLGLGLNK------VAGKVFRIGHLGH----LNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 309 ~~~~~~~-~~~~~~l~~~L~~~~~i~v~~g~~~------~~~~~~Ri~~~~~----~~~~di~~~~~~i~~~l~~ 372 (401)
+++.++. +.+..++.+.|.++ ||.+.++..+ ..++++|+++... .+++|+++++++|++++++
T Consensus 314 ~~~~~~~~~~~~~~~~~~l~~~-gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 314 FLVDLRPKGLTGKEAEERLDAV-GITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp EEEECGGGTCCHHHHHHHHHHT-TEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred EEEECcccCCCHHHHHHHHHHc-CceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 7888864 45778899988655 9999987531 2356799987653 7999999999999999987
No 115
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.97 E-value=2.5e-28 Score=235.79 Aligned_cols=348 Identities=12% Similarity=0.080 Sum_probs=228.3
Q ss_pred CcccccCCCcCChHHHHHHHccCcCCCCC--cc----------HHHHHHHHHHHHHHHhcCCCCce--EEecCChhHHHH
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNEDYRS--PA----------VPALTKTLLEDIKKIFKTTSGTP--FLIPTTGTGAWE 74 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~~~--~~----------~~~~~~~l~~~la~~~g~~~~~~--i~~~~g~t~a~~ 74 (401)
+..+++|+|..++++|++++.......++ +. ...+...+++++++++|.+..+. .++++|||+|+.
T Consensus 55 ~~i~lias~n~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~An~ 134 (490)
T 2a7v_A 55 RGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANL 134 (490)
T ss_dssp HSEECCTTCCCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHH
T ss_pred cCceEECCCCCCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHHHH
Confidence 45678899999999999999986544331 11 11223345599999999987532 456678999999
Q ss_pred HHHhccCCCCCeEEEEcCCcchHH---H---HHHHHHcCCcEEEEe--CC-CCCCCChHHHHHHHhccCCCCceEEEEEe
Q 015729 75 SALTNTLSPGDRIISFLIGQFSLL---W---IDQQQRLNFNVDVVE--SD-WGEGAKLDVLASKLAADTAHTIKAICIVH 145 (401)
Q Consensus 75 ~~~~~~~~~gd~vl~~~~~~~~~~---~---~~~~~~~g~~~~~v~--~~-~~~~~d~~~le~~~~~~~~~~~~~i~~~~ 145 (401)
.++.++++|||+|++.++.|.++. + .......|..+..++ ++ .++.+|++++++++.+ +++++|+++.
T Consensus 135 ~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~---~~~klIi~~~ 211 (490)
T 2a7v_A 135 AVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARL---FRPRLIIAGT 211 (490)
T ss_dssp HHHHHHCCSCEECCC-------------------------------CCBCTTTCSBCHHHHHHHHHH---HCCSEEEECC
T ss_pred HHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhh---cCCcEEEEcC
Confidence 999999999999999998765432 1 012233454444334 34 3568999999999875 2468888776
Q ss_pred cCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcc-----eeccCcccceEEEecCCCcccCCCcceEEEecHHHHH
Q 015729 146 NETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALE 220 (401)
Q Consensus 146 ~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~ 220 (401)
++|+ ...|+++|.++|++ +|+++++|++|..|.. +..+. ++|++++|.||+|.|+.| |+++++++...
T Consensus 212 s~~~--~~~dl~~i~~ia~~--~g~~livD~Ah~~glv~~g~~~~~~~--~aDiv~~S~hK~l~Gp~G-G~i~~~~~~~~ 284 (490)
T 2a7v_A 212 SAYA--RLIDYARMREVCDE--VKAHLLADMAHISGLVAAKVIPSPFK--HADIVTTTTHKTLRGARS-GLIFYRKGVKA 284 (490)
T ss_dssp SSCC--SCCCHHHHHHHHHH--TTCEEEEECGGGHHHHHTTSSCCGGG--TCSEEEEESSGGGCSCSC-EEEEEECSEEE
T ss_pred CCCC--CcccHHHHHHHHHH--cCCEEEEccccccccccCCcCCCCCC--CCCEEEECCcccCccccc-hheeeccchhc
Confidence 6665 56799999999999 9999999999975532 22222 689999999999987776 99998875210
Q ss_pred HhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCC
Q 015729 221 ASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQK 300 (401)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 300 (401)
.........+.++....+... .+...++++...++++.+|+......+++...++..++++++++.|.+.|+++....
T Consensus 285 -~~~~~~~~~~~~l~~~i~~~~-~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~G~~v~~~~ 362 (490)
T 2a7v_A 285 -VDPKTGREIPYTFEDRINFAV-FPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGG 362 (490)
T ss_dssp -EETTTEEEEECCCHHHHHHHH-TTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGS
T ss_pred -ccccccchhhHHHHHHHHHHh-cccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHcCcEEecCC
Confidence 000000000112222222111 111134577777888888888766545678889999999999999999999886521
Q ss_pred CccCCceeEEEEcC-CCCCHHHHHHHHHhhCCeEEccCC-----CCCCCcEEEEeecc----cCCHHHHHHHHHHHHHHH
Q 015729 301 EEWFSDTVTAVIVP-SHINSSEIVRRAWQRYNLSLGLGL-----NKVAGKVFRIGHLG----HLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 301 ~~~~~~~~~~~~~~-~~~~~~~l~~~L~~~~~i~v~~g~-----~~~~~~~~Ri~~~~----~~~~~di~~~~~~i~~~l 370 (401)
....++++.+. .+.+..++.+.|.+. ||.+..+. .+.....+|++..+ ..+++|++++++.|.+++
T Consensus 363 ---t~t~lv~vdl~~~g~~~~~~~~~L~~~-GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l 438 (490)
T 2a7v_A 363 ---TDNHLVLVDLRPKGLDGARAERVLELV-SITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGV 438 (490)
T ss_dssp ---CSSSEEEEECTTTTCCHHHHHHHHHHT-TEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred ---CCCeEEEEEeCCCCCCHHHHHHHHHhC-CeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHH
Confidence 22356777764 356788888888655 99987542 12234679998744 358999999999999988
Q ss_pred Hh
Q 015729 371 KD 372 (401)
Q Consensus 371 ~~ 372 (401)
+.
T Consensus 439 ~~ 440 (490)
T 2a7v_A 439 NI 440 (490)
T ss_dssp HH
T ss_pred Hh
Confidence 63
No 116
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.97 E-value=1e-28 Score=237.14 Aligned_cols=331 Identities=13% Similarity=0.053 Sum_probs=230.7
Q ss_pred cccccCC-Cc----CChHHHHHHHc--cCcCC---CCCc-cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHH--HH
Q 015729 10 NHLFVPG-PV----HIPDQVIRAMN--RNNED---YRSP-AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWE--SA 76 (401)
Q Consensus 10 ~~~~~~~-p~----~~~~~v~~a~~--~~~~~---~~~~-~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~--~~ 76 (401)
.+.|+.| |. +.++.+.+++. +.... ...+ .......++++.++++++.++. ++++++|+++++. .+
T Consensus 27 ~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~~~~~~-~i~~t~G~~~al~~~~~ 105 (423)
T 3ez1_A 27 NLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYLDVKAE-NVLVWNNSSLELQGLVL 105 (423)
T ss_dssp CEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHTTSCGG-GEEECSSCHHHHHHHHH
T ss_pred eEecCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHhCCChh-hEEEeCCcHHHHHHHHH
Confidence 3455554 33 36667888875 32211 1223 3345567999999999998764 4999999999997 77
Q ss_pred HhccCC--C---------CCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEE-
Q 015729 77 LTNTLS--P---------GDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIV- 144 (401)
Q Consensus 77 ~~~~~~--~---------gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~- 144 (401)
+.+++. + ||+|+++.|+|+++. ..++..|++++.++.+.++ +|++++++++++. +++++|++.
T Consensus 106 ~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~--~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~--~~~~~v~~~~ 180 (423)
T 3ez1_A 106 TFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHF--LLLQTLGFELLTVDMQSDG-PDVDAVERLAGTD--PSVKGILFVP 180 (423)
T ss_dssp HHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHH--HHHHHHTCEEEEEEEETTE-ECHHHHHHHHHSC--TTEEEEEECS
T ss_pred HHHHhccCCCccccccCCCCEEEEcCCCcHHHH--HHHHHcCCEEEeccCCCCC-CCHHHHHHHHhhC--CCceEEEECC
Confidence 777776 7 599999999887654 5577789999999988764 8999999999621 467888755
Q ss_pred ecCCCcccccchH---HHHHHh-hhcCCCcEEEEecccccCccee-------cc-------CcccceEEEecCCCcccCC
Q 015729 145 HNETATGVTNNLS---KVRKLL-DEYRHPALFLVDGVSSICAIDF-------RM-------DEWGIDVALTGSQKALSLP 206 (401)
Q Consensus 145 ~~~n~tG~~~~l~---~i~~l~-~~~~~~~~li~D~a~~~~~~~~-------~~-------~~~~~di~~~s~~K~l~g~ 206 (401)
+++||||.+++.+ +|.++| ++ +|+++|+|++|+...+.. +. +..+.++++.|.+|++.++
T Consensus 181 ~~~NPtG~~~~~~~l~~l~~~a~~~--~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G 258 (423)
T 3ez1_A 181 TYSNPGGETISLEKARRLAGLQAAA--PDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAG 258 (423)
T ss_dssp SSCTTTCCCCCHHHHHHHHTCCCSS--TTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSS
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHhc--cCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCC
Confidence 7899999999877 777787 78 999999999988421111 11 2345789999999976556
Q ss_pred CcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHH-H--HHhcHHHHHHHHHHHHH
Q 015729 207 TGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDL-I--FEEGLENVIERHRRLGK 283 (401)
Q Consensus 207 ~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~-~--~~~g~~~~~~~~~~~~~ 283 (401)
.++|+++.++++.+.+.... . ...++++.....++.++++. . ....+++.++.+.++.+
T Consensus 259 ~r~G~~~~~~~~~~~~~~~~---------------~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 320 (423)
T 3ez1_A 259 AGLGFVASSEDNIRWLSKYL---------------G---AQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFR 320 (423)
T ss_dssp SSCEEEEECHHHHHHHHHHH---------------H---HSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEeCHHHHHHHHHHH---------------h---hhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 77899999999877665321 0 01223555444444444443 0 01224556666666777
Q ss_pred HHHHHHHH----cC--CccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEcc-CCCC-----CCCcEEEEeec
Q 015729 284 ATRLAVEA----WG--LKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGL-GLNK-----VAGKVFRIGHL 351 (401)
Q Consensus 284 ~l~~~L~~----~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~-g~~~-----~~~~~~Ri~~~ 351 (401)
.+.+.|.+ +| +.+..+ ..+.++++.++.+ +..++.+.|.++ ||.+.+ |... ...+++||++.
T Consensus 321 ~l~~~l~~~l~~~~~~~~~~~p----~~g~~~~~~~~~~-~~~~~~~~l~~~-gv~v~~~g~~~~~~~~~~~~~iRis~~ 394 (423)
T 3ez1_A 321 AVDEVLRAELGEGGEYATWTLP----KGGYFISLDTAEP-VADRVVKLAEAA-GVSLTPAGATYPAGQDPHNRNLRLAPT 394 (423)
T ss_dssp HHHHHHHHHHTTTTSSEEECCC----SBSSCEEEEESSS-CHHHHHHHHHHT-TEECCCTTTTSSTTCCSSSCEEEECCS
T ss_pred HHHHHHHHhcCcCCCceEEeCC----CccEEEEEECCCC-cHHHHHHHHHHC-CcEEecCcccccCCCCCCCCeEEEEcC
Confidence 77777665 23 333332 2445788888655 677888888765 999998 4322 13578999885
Q ss_pred ccCCHHHHHHHHHHHHHHHHhc
Q 015729 352 GHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 352 ~~~~~~di~~~~~~i~~~l~~~ 373 (401)
. .+++++++++++|+++++++
T Consensus 395 ~-~~~~~i~~~~~~l~~~l~~~ 415 (423)
T 3ez1_A 395 R-PPVEEVRTAMQVVAACIRLA 415 (423)
T ss_dssp S-SCHHHHHHHHHHHHHHHHHH
T ss_pred C-CCHHHHHHHHHHHHHHHHHH
Confidence 4 49999999999999998764
No 117
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.97 E-value=2.8e-29 Score=241.33 Aligned_cols=299 Identities=9% Similarity=-0.016 Sum_probs=217.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHH--HHHHhccCC--C----------CCeEEEEcCCcchHHHHHHHHHc
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAW--ESALTNTLS--P----------GDRIISFLIGQFSLLWIDQQQRL 106 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~--~~~~~~~~~--~----------gd~vl~~~~~~~~~~~~~~~~~~ 106 (401)
.....++++.++++++.++. ++++++|+++++ +.++.+++. + ||+|+++.|+|+++. ..++..
T Consensus 77 ~~g~~~lr~~ia~~~~~~~~-~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~--~~~~~~ 153 (427)
T 3ppl_A 77 LDGIVDIRQIWADLLGVPVE-QVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHF--SITERF 153 (427)
T ss_dssp SSCCHHHHHHHHHHHTSCGG-GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHH--HHHHHT
T ss_pred CCCcHHHHHHHHHHhCCCcc-eEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHH--HHHHHc
Confidence 34567999999999988764 499999999999 577777665 6 899999999887654 567888
Q ss_pred CCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEE-ecCCCcccccchH---HHHHHh-hhcCCCcEEEEecccccC
Q 015729 107 NFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIV-HNETATGVTNNLS---KVRKLL-DEYRHPALFLVDGVSSIC 181 (401)
Q Consensus 107 g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~-~~~n~tG~~~~l~---~i~~l~-~~~~~~~~li~D~a~~~~ 181 (401)
|++++.++.+.++ +|+++++++++. +++++++++ +++||||.+++.+ +|.++| ++ +|++||+|++|+..
T Consensus 154 g~~~~~v~~~~~g-~d~~~l~~~l~~---~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~--~~~~ii~De~y~~~ 227 (427)
T 3ppl_A 154 GFEMISVPMNEDG-PDMDAVEELVKN---PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAA--PDFRVVWDNAYAVH 227 (427)
T ss_dssp TCEEEEEEEETTE-ECHHHHHHHTTS---TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSS--TTCEEEEECTTTTC
T ss_pred CCEEEEeCCCCCC-CCHHHHHHHHhc---CCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhc--CCCEEEEECCCccc
Confidence 9999999988765 899999999843 467888866 7899999999877 788888 88 99999999998753
Q ss_pred cc------eecc-------CcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCC
Q 015729 182 AI------DFRM-------DEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWP 248 (401)
Q Consensus 182 ~~------~~~~-------~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 248 (401)
.+ +.+. +..+.++++.|.+|++.++.++|+++.++++.+.+.... .. ..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~~l~~~~~~~~-------------~~-----~~ 289 (427)
T 3ppl_A 228 TLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSAENRKWYTGHA-------------GI-----RG 289 (427)
T ss_dssp BSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCHHHHHHHHHHH-------------HH-----HC
T ss_pred ccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCHHHHHHHHHHh-------------hc-----cc
Confidence 21 1111 134678999999998655667899999998877664321 00 01
Q ss_pred CCCcHHHHHHHHHHHHHH--HHhcHHHHHHHHHHHHHHHHHHHHH----c-CCccccCCCccCCceeEEEEcCCCCCHHH
Q 015729 249 YTPSIQLLYGLRAALDLI--FEEGLENVIERHRRLGKATRLAVEA----W-GLKNCTQKEEWFSDTVTAVIVPSHINSSE 321 (401)
Q Consensus 249 ~~~~~~~~~a~~~al~~~--~~~g~~~~~~~~~~~~~~l~~~L~~----~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (401)
.+++.....++.++++.. ....+++.++.+.++.+.+.+.|.+ + ++.+..+ ..+.++++.+++. +..+
T Consensus 290 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p----~~g~~~~~~~~~~-~~~~ 364 (427)
T 3ppl_A 290 IGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVP----AGGYFISLDVVPG-TASR 364 (427)
T ss_dssp SCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCC----SBSSCEEEECSTT-CHHH
T ss_pred CCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCC----CccEEEEEECCcc-hHHH
Confidence 234454444444444421 1223556677777777777777765 2 3444333 2356788898755 6788
Q ss_pred HHHHHHhhCCeEEccCCC-C-----CCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 322 IVRRAWQRYNLSLGLGLN-K-----VAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 322 l~~~L~~~~~i~v~~g~~-~-----~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+.+.|.++ ||.+.++.. . ...+++||++.. .+++++++++++|+++++++
T Consensus 365 ~~~~l~~~-gv~v~~~g~~~~~~~~~~~~~~Ris~~~-~~~~~i~~~~~~l~~~l~~~ 420 (427)
T 3ppl_A 365 VAELAKEA-GIALTGAGSSYPLRQDPENKNLRLAPSL-PPVEELEVAMDGVATCVLLA 420 (427)
T ss_dssp HHHHHHHT-TEECCCTTTTSGGGCCTTSCEEEECCSS-SCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHC-CCEEecCcCcCCCCCCCCCCeEEEECCC-CCHHHHHHHHHHHHHHHHHH
Confidence 88888765 999998422 1 135789998844 58999999999999998764
No 118
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.97 E-value=1.8e-28 Score=241.06 Aligned_cols=324 Identities=14% Similarity=0.093 Sum_probs=223.2
Q ss_pred ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC-------C-CCC------eEEEEcCCcchHHHHHHH
Q 015729 38 PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL-------S-PGD------RIISFLIGQFSLLWIDQQ 103 (401)
Q Consensus 38 ~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~-------~-~gd------~vl~~~~~~~~~~~~~~~ 103 (401)
+...+...++++.+++++|.+. ..+++++|||+|+..++.+.. + +|+ +|+++..+|++.. ..+
T Consensus 144 ~~~~~le~~~~~~la~l~g~~~-~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~--~~~ 220 (515)
T 2jis_A 144 PVFVLMEEEVLRKLRALVGWSS-GDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQ--KGA 220 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSS-CEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHH--HHH
T ss_pred hHHHHHHHHHHHHHHHHhCCCC-CCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHH--HHH
Confidence 4455678889999999999974 459999999999988776542 2 465 7888888888765 455
Q ss_pred HHcCC---cEEEEeCCCCCCCChHHHHHHHhccC--CCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEeccc
Q 015729 104 QRLNF---NVDVVESDWGEGAKLDVLASKLAADT--AHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVS 178 (401)
Q Consensus 104 ~~~g~---~~~~v~~~~~~~~d~~~le~~~~~~~--~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~ 178 (401)
+..|. +++.++.+.++.+|+++|+++++++. +.++++|++++++|++|.+.|+++|.++|++ +|+++|+|+++
T Consensus 221 ~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~--~g~~l~vD~a~ 298 (515)
T 2jis_A 221 AFLGLGTDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQR--HGLWLHVDAAW 298 (515)
T ss_dssp HHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHH--HTCEEEEEETT
T ss_pred HHcCCCCCcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHH--cCCeEEEehhh
Confidence 66677 99999998888999999999997531 1247999999999999999999999999999 99999999999
Q ss_pred ccCcceec-----cCcc-cceEEEecCCCcccCCCcceEEEecHH--HHHHhccCCCCccccchHHHHHHhhcCCC-CCC
Q 015729 179 SICAIDFR-----MDEW-GIDVALTGSQKALSLPTGMGIVCASPK--ALEASKTAKSVRVFFDWKDYIKFYNLGTF-WPY 249 (401)
Q Consensus 179 ~~~~~~~~-----~~~~-~~di~~~s~~K~l~g~~g~G~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~ 249 (401)
+.+....+ .... ++|++++++||++++|.|+|+++++++ ++++...................++.+.. ...
T Consensus 299 ~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 378 (515)
T 2jis_A 299 GGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQC 378 (515)
T ss_dssp GGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCS
T ss_pred hhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCC
Confidence 98776543 3333 789999999999988889999999877 65543221111100000000000111100 000
Q ss_pred CCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEc-CCCC----CHH---
Q 015729 250 TPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIV-PSHI----NSS--- 320 (401)
Q Consensus 250 ~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-~~~~----~~~--- 320 (401)
+.. ....++++++..+...|+++..++..++++++.+.|+++ |+++..+. ... .+.|.. |.+. +..
T Consensus 379 ~rr-~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~---~~~-~v~f~~~p~~~~~~~~~~~~~ 453 (515)
T 2jis_A 379 GRR-VDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVMEP---EFV-NVCFWFVPPSLRGKQESPDYH 453 (515)
T ss_dssp SCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCC---SSS-EEEEEECCGGGTTCTTSTTHH
T ss_pred CCc-ccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC---Cee-EEEEEEeCccccccccchhHH
Confidence 000 012345556666667788899999999999999999997 88876532 122 344543 3211 111
Q ss_pred --------HHHHHHHhhCCeEE-ccCCCCCCCcEEEEee-cccCCHHHHHHHHHHHHHHHHh
Q 015729 321 --------EIVRRAWQRYNLSL-GLGLNKVAGKVFRIGH-LGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 321 --------~l~~~L~~~~~i~v-~~g~~~~~~~~~Ri~~-~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.+.+.|.+. |+.+ .........+++|+++ ..++|++|+++++++|++++++
T Consensus 454 ~~l~~~~~~l~~~l~~~-G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 454 ERLSKVAPVLKERMVKE-GSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp HHHHTHHHHHHHHHHHH-TSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhc-CCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 255666666 6443 2111111235799998 6788999999999999988754
No 119
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.97 E-value=8.2e-29 Score=238.76 Aligned_cols=308 Identities=14% Similarity=0.073 Sum_probs=222.1
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc-cCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeC
Q 015729 39 AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN-TLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVES 115 (401)
Q Consensus 39 ~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~-~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~ 115 (401)
...+...++++++++++|.+.. ++++++|+|.+++.+..+ .+++||+|+++.+.|+++. +...++..|++++.++.
T Consensus 105 g~~~~~~~~~~~la~~~g~~~~-~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~ 183 (438)
T 1wyu_A 105 GVLQATFEYQTMIAELAGLEIA-NASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL 183 (438)
T ss_dssp HHHHHHHHHHHHHHHHHTSSEE-CSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hHHHHHHHHHHHHHHHhCCCcc-ceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC
Confidence 3556788999999999999753 378899999555544333 3578999999999988875 44556778999999987
Q ss_pred CCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecc-cccCcceeccCcccceE
Q 015729 116 DWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGV-SSICAIDFRMDEWGIDV 194 (401)
Q Consensus 116 ~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a-~~~~~~~~~~~~~~~di 194 (401)
.++.+|+++ ++ +++++|+++++ |++|.+.|+++|.++|++ +|+++|+|.. +++|....+ ..+++|+
T Consensus 184 -~~~~~d~~~----i~----~~t~~v~i~~p-n~tG~~~~l~~i~~la~~--~g~~vivd~d~~a~g~~~~~-~~~g~D~ 250 (438)
T 1wyu_A 184 -EGGRTPLPE----VG----EEVGAVVVQNP-NFLGALEDLGPFAEAAHG--AGALFVAVADPLSLGVLKPP-GAYGADI 250 (438)
T ss_dssp -BTTBCCCCC----CC----TTEEEEEEESS-CTTSBCCCHHHHHHHHHH--TTCEEEEECCTTGGGTBCCH-HHHTCSE
T ss_pred -cCCccCHHH----hC----CCeEEEEEECC-CCCeEEecHHHHHHHHHH--cCCEEEEEechhhccCcCCC-ccCCCCE
Confidence 455677766 43 46799999998 999999999999999999 9999997754 555544333 4467999
Q ss_pred EEecCCC-----cccCCCcceEEEecHHHHHHhccCCC---------Cccccch--HHHHHHhhcCCCCCCCCcHHHHHH
Q 015729 195 ALTGSQK-----ALSLPTGMGIVCASPKALEASKTAKS---------VRVFFDW--KDYIKFYNLGTFWPYTPSIQLLYG 258 (401)
Q Consensus 195 ~~~s~~K-----~l~g~~g~G~l~~~~~~~~~~~~~~~---------~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~a 258 (401)
+++|+|| +++|+ |+|++++++++.+.+..... ..+.+++ .....+++.++....+. ..+++
T Consensus 251 ~~~s~kk~~~~~~~~Gp-~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~--~~~~a 327 (438)
T 1wyu_A 251 AVGDGQSLGLPMGFGGP-HFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTN--AQLTA 327 (438)
T ss_dssp EEEECTTTTCCCGGGCS-CCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSC--CHHHH
T ss_pred EEECCcccCCCccCCCC-CeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccch--HHHHH
Confidence 9999777 56556 89999999988776643211 0111111 12333444554211112 23344
Q ss_pred HHHH--HHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEE-
Q 015729 259 LRAA--LDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSL- 334 (401)
Q Consensus 259 ~~~a--l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v- 334 (401)
+.++ +..+.++|++++.++..++++++.+.|+++ |+++..+. . . ...+.+..+ .+..++.++|.++ ||.+
T Consensus 328 ~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~-~-~~~~~~~~~--~~~~~~~~~L~~~-gi~v~ 401 (438)
T 1wyu_A 328 LMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPK-P-F-FNEFALALP--KDPEAVRRALAER-GFHGA 401 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCS-S-B-CSEEEEECS--SCHHHHHHHHHHT-TCCCC
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCC-C-e-EEEEEEeCC--CCHHHHHHHHHHC-Cceec
Confidence 4444 666666678889999999999999999998 98886532 1 1 123445543 4678999999876 9988
Q ss_pred -ccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 335 -GLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 335 -~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
.++... .++++||++..++|++|+++++++|++++
T Consensus 402 ~~~~~~~-~~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 402 TPVPREY-GENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp EECCTTS-CSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred ccccccc-CCCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 555432 26789999998899999999999998764
No 120
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.97 E-value=8.2e-29 Score=240.58 Aligned_cols=352 Identities=13% Similarity=0.022 Sum_probs=241.3
Q ss_pred CcccccCCCcCChHHHHHHHccCcCC-----CCCccHHHHHHHHHHHHHHHhcCCCC--------ceEEecCChhHHHHH
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNED-----YRSPAVPALTKTLLEDIKKIFKTTSG--------TPFLIPTTGTGAWES 75 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~--------~~i~~~~g~t~a~~~ 75 (401)
+.+.+.++|...+..+.+.+....+. ..++...++..++.+.+++++|.+.. ...++++|||+|+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~ 154 (475)
T 3k40_A 75 KFHAYFPTANSYPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLV 154 (475)
T ss_dssp TBCCSSCCCCCHHHHHHHHHHHHHCCCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHH
T ss_pred CceeeCCCCCcHHHHHHHHHHHHhCccccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHH
Confidence 45556666666555555555542211 12345566777788888999998753 258899999999987
Q ss_pred HHhccC-------------------CCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCC-
Q 015729 76 ALTNTL-------------------SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTA- 135 (401)
Q Consensus 76 ~~~~~~-------------------~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~- 135 (401)
++.+.. .+++.|+++...|++.. +.++..|++++.|+++.++ +|+++|++++++++.
T Consensus 155 al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~--~~~~~~g~~~~~v~~d~~~-~d~~~L~~~i~~~~~~ 231 (475)
T 3k40_A 155 ALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVE--RAGLLGGVKLRSVQSENHR-MRGAALEKAIEQDVAE 231 (475)
T ss_dssp HHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHH--HHHHHHTCEEEEECCBTTB-CCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhccCcccccccccCCeEEEECCCchHHHH--HHHHHcCCceEEEECCCCC-cCHHHHHHHHHHHHHC
Confidence 775431 13467899989888764 5567789999999999888 999999999986421
Q ss_pred -CCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceec---c--Cc-ccceEEEecCCCcccCCCc
Q 015729 136 -HTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFR---M--DE-WGIDVALTGSQKALSLPTG 208 (401)
Q Consensus 136 -~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~---~--~~-~~~di~~~s~~K~l~g~~g 208 (401)
..++++++++++|++|.+.|+++|.++|++ +|+++|+|++|+.+....+ . .. ..+|++++++||++++|.|
T Consensus 232 ~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~--~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g 309 (475)
T 3k40_A 232 GLIPFYAVVTLGTTNSCAFDYLDECGPVGNK--HNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFD 309 (475)
T ss_dssp TCEEEEEEEEBSCTTTCCBCCHHHHHHHHHH--TTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSS
T ss_pred CCccEEEEEEecCCCCcCcCCHHHHHHHHHH--hCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCc
Confidence 126788899999999999999999999999 9999999999987643221 1 11 1469999999999999999
Q ss_pred ceEEEecHHHH-HHhccCCCCccccchHHHHHHhhcCCC-CCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 015729 209 MGIVCASPKAL-EASKTAKSVRVFFDWKDYIKFYNLGTF-WPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATR 286 (401)
Q Consensus 209 ~G~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~ 286 (401)
+|+++++++.. .+....... |............+.+ ...+.+ .....++++++.+...|+++..++..++++++.
T Consensus 310 ~g~l~~~~~~~l~~~~~~~~~--yl~~~~~~~~~~~~~~~~~~sr~-~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~ 386 (475)
T 3k40_A 310 CSAMWLKDPSWVVNAFNVDPL--YLKHDMQGSAPDYRHWQIPLGRR-FRALKLWFVLRLYGVENLQAHIRRHCNFAKQFG 386 (475)
T ss_dssp CEEEEESSGGGC-----------------------------CCCGG-GTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCHHHHHHHhcCCcc--ccCCCcCCCCCCcccccccCCCc-ccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 99999887532 211111111 1110000000000000 011111 245678888888888889999999999999999
Q ss_pred HHHHHc-CCccccCCCccCCceeEEEEcCC-CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecc-cCCHHHHHHHH
Q 015729 287 LAVEAW-GLKNCTQKEEWFSDTVTAVIVPS-HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG-HLNELQLLGCL 363 (401)
Q Consensus 287 ~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~-~~~~~di~~~~ 363 (401)
+.|+++ |+++..+. .. .+++|.++. .....++.++|.++.++.+.++... ...++|+++.. .+|++||++++
T Consensus 387 ~~L~~~~g~~l~~~~---~~-~iv~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-g~~~lR~~~~~~~tt~~di~~~~ 461 (475)
T 3k40_A 387 DLCVADSRFELAAEI---NM-GLVCFRLKGSNERNEALLKRINGRGHIHLVPAKIK-DVYFLRMAICSRFTQSEDMEYSW 461 (475)
T ss_dssp HHHHHSTTEEESSCC---BT-TEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEET-TEEEEEEECCCTTCCHHHHHHHH
T ss_pred HHHhcCCCEEEecCC---ce-EEEEEEeCCchHHHHHHHHHHHhCCcEEEEeeEEC-CEEEEEEEeCCCCCCHHHHHHHH
Confidence 999997 88887542 23 466777742 1235688888888744555444322 24579998765 45899999999
Q ss_pred HHHHHHHHhc
Q 015729 364 AGVEMILKDV 373 (401)
Q Consensus 364 ~~i~~~l~~~ 373 (401)
++|+++++++
T Consensus 462 ~~i~~~~~~~ 471 (475)
T 3k40_A 462 KEVSAAADEM 471 (475)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988764
No 121
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.97 E-value=5.8e-28 Score=229.18 Aligned_cols=326 Identities=16% Similarity=0.083 Sum_probs=226.8
Q ss_pred ChHHHHHHHccCcCCC-CCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc-CCCCCeEEEEcCCcchH
Q 015729 20 IPDQVIRAMNRNNEDY-RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPGDRIISFLIGQFSL 97 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~~-~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~ 97 (401)
+.+++++++.+..... ..+.......++++.+++++|.+ +.++++ +||+|++.++.++ +++||+|+++.++|++.
T Consensus 15 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~l~~~la~~~~~~--~~i~~~-sGt~al~~~l~~l~~~~gd~Vi~~~~~~~~~ 91 (388)
T 1b9h_A 15 YDDAERNGLVRALEQGQWWRMGGDEVNSFEREFAAHHGAA--HALAVT-NGTHALELALQVMGVGPGTEVIVPAFTFISS 91 (388)
T ss_dssp CCHHHHHHHHHHHHTSCCBTTTCSHHHHHHHHHHHHTTCS--EEEEES-CHHHHHHHHHHHTTCCTTCEEEEESSSCTHH
T ss_pred CCHHHHHHHHHHHHcCCeeecCCHHHHHHHHHHHHHhCCC--eEEEeC-CHHHHHHHHHHHcCCCCcCEEEECCCccHHH
Confidence 4466777776643221 12233456789999999999986 335555 5699999999888 89999999999998887
Q ss_pred HHHHHHHHcCCcEEEEeCCCC-CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEec
Q 015729 98 LWIDQQQRLNFNVDVVESDWG-EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDG 176 (401)
Q Consensus 98 ~~~~~~~~~g~~~~~v~~~~~-~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~ 176 (401)
. ..++..|++++.++++++ +.+|++++++++++ ++++|+ ++|++|.+.++++|.++|++ +|+++|+|+
T Consensus 92 ~--~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~----~~~~v~---~~n~tG~~~~l~~i~~la~~--~~~~li~D~ 160 (388)
T 1b9h_A 92 S--QAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTP----RTKVIM---PVHMAGLMADMDALAKISAD--TGVPLLQDA 160 (388)
T ss_dssp H--HHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT----TEEEEC---CBCGGGCCCCHHHHHHHHHH--HTCCBCEEC
T ss_pred H--HHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc----CceEEE---EeCCccCcCCHHHHHHHHHH--cCCEEEEec
Confidence 5 456778999999999864 67899999999863 567766 78999999999999999999 999999999
Q ss_pred ccccCcce--eccCccc-ceEEEecCCCcccCCCcceEEEecHH-H--HHHhccCCCCccccchHHHHHHh---hcCCCC
Q 015729 177 VSSICAID--FRMDEWG-IDVALTGSQKALSLPTGMGIVCASPK-A--LEASKTAKSVRVFFDWKDYIKFY---NLGTFW 247 (401)
Q Consensus 177 a~~~~~~~--~~~~~~~-~di~~~s~~K~l~g~~g~G~l~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~ 247 (401)
+|+.|... .+....+ +++..+|.||+++|+. .|+++++++ + .+.+........ .. ....+ ..|+
T Consensus 161 a~~~g~~~~~~~~~~~~~i~~~S~s~~K~l~g~~-~G~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~g~-- 233 (388)
T 1b9h_A 161 AHAHGARWQGKRVGELDSIATFSFQNGKLMTAGE-GGAVVFPDGETEKYETAFLRHSCGR--PR--DDRRYFHKIAGS-- 233 (388)
T ss_dssp TTCTTCEETTEEGGGSSSCEEEECCTTSSSCSSS-CEEEEECTTCHHHHHHHHHHTBTTC--CT--TCSSCCCCSCCC--
T ss_pred chhcCCccCCeecccccceEEEEccCCCcccCCC-eEEEEECCHHHHHHHHHHHHHhCCC--Cc--cCccceeecccc--
Confidence 99977544 3333444 6667777889997654 599998876 4 444422110000 00 00000 0111
Q ss_pred CCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCc--cCCceeEEEEcCCC--CCHHHH
Q 015729 248 PYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEE--WFSDTVTAVIVPSH--INSSEI 322 (401)
Q Consensus 248 ~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~l 322 (401)
....+...++++..+++ .+++..++++++++++.+.|+++ |+.+....+. ...+.++++.++.. .+..++
T Consensus 234 ~~~~~~~~~a~~~~~~~-----~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 308 (388)
T 1b9h_A 234 NMRLNEFSASVLRAQLA-----RLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNAL 308 (388)
T ss_dssp BCBCBHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHH
T ss_pred cCCcCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcCcccHHHH
Confidence 11244443333322222 35667788888999999999987 7776543211 13346788888642 256789
Q ss_pred HHHHHhhCCeEEccCCCCCC-----------------------------CcEEEEeecccC-CHHHHHHHHHHHHHHHHh
Q 015729 323 VRRAWQRYNLSLGLGLNKVA-----------------------------GKVFRIGHLGHL-NELQLLGCLAGVEMILKD 372 (401)
Q Consensus 323 ~~~L~~~~~i~v~~g~~~~~-----------------------------~~~~Ri~~~~~~-~~~di~~~~~~i~~~l~~ 372 (401)
.+.|.++ ||.++.++.+.. ...+||+++..+ |++|+++++++|++++++
T Consensus 309 ~~~L~~~-gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 309 VDRLVEA-GLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVAR 387 (388)
T ss_dssp HHHHHHT-TCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHC-CCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 9999865 999987754310 125999999889 999999999999998764
No 122
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.96 E-value=4.4e-28 Score=226.77 Aligned_cols=307 Identities=13% Similarity=0.087 Sum_probs=222.4
Q ss_pred CCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcc
Q 015729 16 GPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQF 95 (401)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~ 95 (401)
.|.+.++.+++++.+.......+.... ..++++.+++++|.+++ ++++++|+++|+..++.++. ||+|+++.++|+
T Consensus 25 ~~~~~~~~v~~a~~~~~~~~~~y~~~~-~~~lr~~la~~~~~~~~-~i~~t~g~~~al~~~~~~l~--gd~Vi~~~p~~~ 100 (350)
T 3fkd_A 25 WTDGDKDHLEKHLVENLNCIRHYPEPD-AGTLRQMLAKRNSVDNN-AILVTNGPTAAFYQIAQAFR--GSRSLIAIPSFA 100 (350)
T ss_dssp CCCSCCHHHHHHHHHTGGGGGSCCCTT-CHHHHHHHHHHTTCCGG-GEEEESHHHHHHHHHHHHTT--TCEEEEEESCCH
T ss_pred CCCCCCHHHHHHHHHhHhHHhcCCCCc-HHHHHHHHHHHhCcCHH-HEEEcCCHHHHHHHHHHHHC--CCEEEEeCCCcH
Confidence 356678889998887552221221112 26899999999998654 49999999999999988876 999999999877
Q ss_pred hHHHHHHHHHcCCcEEEEeC-CCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEE
Q 015729 96 SLLWIDQQQRLNFNVDVVES-DWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLV 174 (401)
Q Consensus 96 ~~~~~~~~~~~g~~~~~v~~-~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~ 174 (401)
+.. ..++..|++++.++. +....+++ ++++++++++++||||.+.|++++.++++.++ ..+||+
T Consensus 101 ~~~--~~~~~~g~~~~~v~~~~~~~~~~~------------~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~-~~~li~ 165 (350)
T 3fkd_A 101 EYE--DACRMYEHEVCFYPSNEDIGEADF------------SNMDFCWLCNPNNPDGRLLQRTEILRLLNDHP-DTTFVL 165 (350)
T ss_dssp HHH--HHHHHTTCEEEEEETTSCGGGSCC------------TTCSEEEEESSCTTTCCCCCHHHHHHHHHHCT-TSEEEE
T ss_pred HHH--HHHHHcCCeEEEEecCCccccCcc------------CCCCEEEEeCCCCCcCCCCCHHHHHHHHHhCC-CCEEEE
Confidence 654 567888999999998 65444554 25689999999999999999999999999832 159999
Q ss_pred ecccccCcce-----eccCcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCC
Q 015729 175 DGVSSICAID-----FRMDEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWP 248 (401)
Q Consensus 175 D~a~~~~~~~-----~~~~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 248 (401)
|++|+..... ......+.++++.|.+|+++ ++.++|+++.++++.+.+..... .
T Consensus 166 Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~--------------------~ 225 (350)
T 3fkd_A 166 DQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFST--------------------P 225 (350)
T ss_dssp ECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCHHHHHHHHTTCC--------------------T
T ss_pred ECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCHHHHHHHHHhCC--------------------C
Confidence 9998754321 12234456799999999985 34457999999998887765321 2
Q ss_pred CCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCCCHHHHHHHHH
Q 015729 249 YTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAW 327 (401)
Q Consensus 249 ~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 327 (401)
++++...+.++.++++... .+.+..++..++++++.+.|+++ |+.+..+ .+.++++.+|.. +..++.+.|.
T Consensus 226 ~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~l~~~L~ 297 (350)
T 3fkd_A 226 WAVNALAIEAAKFILIHPA--QFTLPIRKWQRNTVDFITALNRLDGVEVHPS-----GTTFFLLRLKKG-TAAELKKYML 297 (350)
T ss_dssp TCSCHHHHHHHHHHHHCTT--TTCCCHHHHHHHHHHHHHHHHHSTTEEECCC-----SSSEEEEEESSS-CHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhCHH--HHHHHHHHHHHHHHHHHHHHhcCCCcEECCC-----CCcEEEEECCCC-CHHHHHHHHH
Confidence 2456655555555554211 12223333448889999999887 7776442 234566888765 7889999998
Q ss_pred hhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 328 QRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 328 ~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
++.||.+.+|..+ ..++++||++. +++|+++++++|++++++
T Consensus 298 ~~~gi~v~~g~~f~~~~~~~iRis~~---~~~~~~~l~~al~~~~~~ 341 (350)
T 3fkd_A 298 EEYNMLIRDASNFRGLDESYVRITTQ---RPAQNQLFIKALETFLEK 341 (350)
T ss_dssp HTTCEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHHTC
T ss_pred HHCCEEEEeCccCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHHH
Confidence 7459999988543 23678999754 789999999999988753
No 123
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.96 E-value=1.1e-28 Score=232.97 Aligned_cols=333 Identities=11% Similarity=0.087 Sum_probs=235.2
Q ss_pred cccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc-CCCCCeEE
Q 015729 10 NHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPGDRII 88 (401)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~-~~~gd~vl 88 (401)
.+.++.+.....+ +.+++.+..... .+.......++++.++++++.+ .+++++|||+|+..++.++ +++||+|+
T Consensus 8 ~~~l~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~l~~~la~~~~~~---~~~~~~~gt~a~~~~~~~~~~~~gd~v~ 82 (374)
T 3uwc_A 8 YSYLERQFADIEP-YLNDLREFIKTA-DFTLGAELEKFEKRFAALHNAP---HAIGVGTGTDALAMSFKMLNIGAGDEVI 82 (374)
T ss_dssp SCCHHHHTSSCHH-HHHHHHHHHHHT-CCSSCHHHHHHHHHHHHHTTCS---EEEEESCHHHHHHHHHHHTTCCTTCEEE
T ss_pred eeccccCCCCchH-HHHHHHHHHHcC-CcccChhHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHcCCCCCCEEE
Confidence 3455556666666 777777643322 1233567889999999999886 3889999999999999988 99999999
Q ss_pred EEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCC
Q 015729 89 SFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRH 168 (401)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~ 168 (401)
++.++|++.. ..++..|++++.++.+.++.+|++++++++++ ++++++ ++||||.+.|+++|.++|++ +
T Consensus 83 ~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~v~---~~n~~G~~~~~~~i~~~~~~--~ 151 (374)
T 3uwc_A 83 TCANTFIASV--GAIVQAGATPVLVDSENGYVIDPEKIEAAITD----KTKAIM---PVHYTGNIADMPALAKIAKK--H 151 (374)
T ss_dssp EESSSCHHHH--HHHHHTTCEEEEECBCTTSSBCGGGTGGGCCT----TEEEEC---CBCGGGCCCCHHHHHHHHHH--T
T ss_pred ECCCccHHHH--HHHHHcCCEEEEEecCCCCCcCHHHHHHhCCC----CceEEE---EeCCcCCcCCHHHHHHHHHH--c
Confidence 9999888765 45678899999999987778899999998874 557766 78899999999999999999 9
Q ss_pred CcEEEEecccccCcceeccCccc--ceEEEecCC--CcccCCCcceEEEecH-HHHHHhccCCCCccccchHHHHHHhhc
Q 015729 169 PALFLVDGVSSICAIDFRMDEWG--IDVALTGSQ--KALSLPTGMGIVCASP-KALEASKTAKSVRVFFDWKDYIKFYNL 243 (401)
Q Consensus 169 ~~~li~D~a~~~~~~~~~~~~~~--~di~~~s~~--K~l~g~~g~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (401)
|+++|+|++|+.|.. ++....+ .|++++|.| |++++....|+++.++ ++.+.+.......... .+..
T Consensus 152 ~~~li~D~~~~~g~~-~~~~~~~~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 223 (374)
T 3uwc_A 152 NLHIVEDACQTILGR-INDKFVGSWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNHGLIN-------RDVC 223 (374)
T ss_dssp TCEEEEECTTCTTCE-ETTEETTSSSSEEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEEE-------TTEE
T ss_pred CCEEEEeCCCccCce-eCCeeccccccEEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHHHHhcCccc-------cCcc
Confidence 999999999998754 3333333 699999966 9996523357777654 5555444322111000 0100
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-C-CccccCCCc-cCCceeEEEEcCCCCCHH
Q 015729 244 GTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-G-LKNCTQKEE-WFSDTVTAVIVPSHINSS 320 (401)
Q Consensus 244 g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g-~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 320 (401)
.. ...+.. +..+.+++......++++..++.+++.+++.+.|.++ + +.+...... ...+..+.+..+ +..
T Consensus 224 ~~-~~~~~~---~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 296 (374)
T 3uwc_A 224 VE-YGINCR---MDTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRVK---YRD 296 (374)
T ss_dssp SS-CCCBCB---CCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEET---THH
T ss_pred cc-ccccCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEcC---CHH
Confidence 00 000111 1234455555555567888888999999999999887 4 555432211 112223334432 578
Q ss_pred HHHHHHHhhCCeEEccCCC-CC----------------------CCcEEEEeecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 321 EIVRRAWQRYNLSLGLGLN-KV----------------------AGKVFRIGHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 321 ~l~~~L~~~~~i~v~~g~~-~~----------------------~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
++.+.|.++ ||.+++++. +. ....+|++++..+|++|+++++++|++++++.+
T Consensus 297 ~l~~~L~~~-gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~~~ 372 (374)
T 3uwc_A 297 QLFQYLKDN-GIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLEKH 372 (374)
T ss_dssp HHHHHHHHT-TBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHC-CCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHhhc
Confidence 899999876 999988761 00 015799999999999999999999999998754
No 124
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.96 E-value=5.9e-28 Score=236.81 Aligned_cols=320 Identities=12% Similarity=0.104 Sum_probs=222.9
Q ss_pred ccHHHHHHHHHHHHHHHhcCCC-CceEEecCChhHHHHHHHhccCC--------CC-----C-eEEEEcCCcchHHHHHH
Q 015729 38 PAVPALTKTLLEDIKKIFKTTS-GTPFLIPTTGTGAWESALTNTLS--------PG-----D-RIISFLIGQFSLLWIDQ 102 (401)
Q Consensus 38 ~~~~~~~~~l~~~la~~~g~~~-~~~i~~~~g~t~a~~~~~~~~~~--------~g-----d-~vl~~~~~~~~~~~~~~ 102 (401)
+....+..++++.+++++|.+. ...+++++|||+|+..++.+... +| + .|+++.++|+++. ..
T Consensus 128 ~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~--~~ 205 (504)
T 2okj_A 128 PVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIK--KA 205 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHH--HH
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHH--HH
Confidence 3344556778899999999873 44599999999999988766431 45 6 6888888888765 44
Q ss_pred HHHcCC---cEEEEeCCCCCCCChHHHHHHHhccC--CCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecc
Q 015729 103 QQRLNF---NVDVVESDWGEGAKLDVLASKLAADT--AHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGV 177 (401)
Q Consensus 103 ~~~~g~---~~~~v~~~~~~~~d~~~le~~~~~~~--~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a 177 (401)
++..|. +++.++.+.++.+|+++|+++++++. +.++++|++++++|++|.+.|+++|.++|++ +|+++|+|++
T Consensus 206 ~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~--~g~~lhvD~a 283 (504)
T 2okj_A 206 GAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEK--YNLWLHVDAA 283 (504)
T ss_dssp HHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHH--HTCEEEEEET
T ss_pred HHHcCCCcccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHH--cCCEEEEehh
Confidence 555565 89999998888999999999997521 1247899999999999999999999999999 9999999999
Q ss_pred cccCcce-----eccCc-ccceEEEecCCCcccCCCcceEEEecHH-HHHHhccCCCCccc---------cchHHHHHHh
Q 015729 178 SSICAID-----FRMDE-WGIDVALTGSQKALSLPTGMGIVCASPK-ALEASKTAKSVRVF---------FDWKDYIKFY 241 (401)
Q Consensus 178 ~~~~~~~-----~~~~~-~~~di~~~s~~K~l~g~~g~G~l~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~~ 241 (401)
++.+... ..... .++|++++++||+++++.|+|+++++++ .............. .++.+ ..+
T Consensus 284 ~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~ 361 (504)
T 2okj_A 284 WGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGD--KAI 361 (504)
T ss_dssp TGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGG--GSS
T ss_pred hhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCccc--CCC
Confidence 9877653 22232 3789999999999988889999999874 55542211111110 00000 000
Q ss_pred hcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEc-CCCC--
Q 015729 242 NLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIV-PSHI-- 317 (401)
Q Consensus 242 ~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-~~~~-- 317 (401)
..+. .... .++.++++.+...|+++..++..++++++.+.|++. |+++..+.+. ..+ ++.|.. |...
T Consensus 362 ~~~r----r~~~---l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p-~~~-~v~f~~~~~~~~~ 432 (504)
T 2okj_A 362 QCGR----HVDI---FKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEP-EHT-NVCFWYIPQSLRG 432 (504)
T ss_dssp CSSC----BCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCC-SSS-CEEEEECCGGGSS
T ss_pred CCCC----CccH---HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCC-CeE-EEEEEEeCccccc
Confidence 1111 0122 344555666666778889999999999999999987 8887652112 233 344443 3211
Q ss_pred -------------CHHHHHHHHHhhCC-eEEccCCCCCCCcEEEEeec-ccCCHHHHHHHHHHHHHHHHhc
Q 015729 318 -------------NSSEIVRRAWQRYN-LSLGLGLNKVAGKVFRIGHL-GHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 318 -------------~~~~l~~~L~~~~~-i~v~~g~~~~~~~~~Ri~~~-~~~~~~di~~~~~~i~~~l~~~ 373 (401)
...++.+.|.++ | +.+..+......+++|+++. ..+|++|+++++++|+++++++
T Consensus 433 ~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 502 (504)
T 2okj_A 433 VPDSPQRREKLHKVAPKIKALMMES-GTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 502 (504)
T ss_dssp CCCCHHHHHHHTTHHHHHHHHHHHH-TSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC-
T ss_pred cccchhhHHHHHHHHHHHHHHHHhC-CcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 034677888877 6 44443221111257999986 6789999999999999987653
No 125
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.96 E-value=2.3e-28 Score=227.37 Aligned_cols=301 Identities=12% Similarity=0.049 Sum_probs=223.2
Q ss_pred cccccCCC-cCChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHhc---CCCCceEEecCChhHHHHHHHhccCCC
Q 015729 10 NHLFVPGP-VHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFK---TTSGTPFLIPTTGTGAWESALTNTLSP 83 (401)
Q Consensus 10 ~~~~~~~p-~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g---~~~~~~i~~~~g~t~a~~~~~~~~~~~ 83 (401)
.++..+.+ .+.++.+++++.+.... ...+.. ....++++.++++++ .++ +++++++|+++|+..++.++
T Consensus 22 i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~lr~~la~~~~~~~~~~-~~v~~~~G~~~al~~~~~~~--- 96 (335)
T 1uu1_A 22 TYLALNENPFPFPEDLVDEVFRRLNSDALRIYYD-SPDEELIEKILSYLDTDFLSK-NNVSVGNGADEIIYVMMLMF--- 96 (335)
T ss_dssp EEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCC-SSCHHHHHHHHHHHTCSSCCG-GGEEEESSHHHHHHHHHHHS---
T ss_pred eECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-CchHHHHHHHHHHcCCCCCCH-HHEEEcCChHHHHHHHHHHh---
Confidence 45555544 56789999998886521 111111 136799999999999 554 45999999999999998877
Q ss_pred CCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHh
Q 015729 84 GDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLL 163 (401)
Q Consensus 84 gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~ 163 (401)
||+|+++ ++|++.. ..++..|++++.++.+.++.+|++++ + +++++++++|+||||.+.|.+++.+++
T Consensus 97 gd~Vl~~-p~y~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l-----~----~~~~v~l~~p~nptG~~~~~~~l~~l~ 164 (335)
T 1uu1_A 97 DRSVFFP-PTYSCYR--IFAKAVGAKFLEVPLTKDLRIPEVNV-----G----EGDVVFIPNPNNPTGHVFEREEIERIL 164 (335)
T ss_dssp SEEEECS-SSCHHHH--HHHHHHTCEEEECCCCTTSCCCCCCC-----C----TTEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred CCcEEEC-CCcHHHH--HHHHHcCCeEEEeccCCCCCCCHHHc-----C----CCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 8999999 9877654 55677899999999877667788776 2 468999999999999999999999999
Q ss_pred hhcCCCcEEEEecccccCcc--eec-cCcccceEEEecCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHHH
Q 015729 164 DEYRHPALFLVDGVSSICAI--DFR-MDEWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (401)
Q Consensus 164 ~~~~~~~~li~D~a~~~~~~--~~~-~~~~~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (401)
+. .| ++|+|++|+.+.. ..+ ....+.++++.|.+|+++ .+| +|++++++++.+.+....
T Consensus 165 ~~--~~-~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~G~r~G~~~~~~~~~~~l~~~~------------ 228 (335)
T 1uu1_A 165 KT--GA-FVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFS-LAAQRVGYVVASEKFIDAYNRVR------------ 228 (335)
T ss_dssp HT--TC-EEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTTT-CGGGCCEEEEECHHHHHHHHHHS------------
T ss_pred Hh--CC-EEEEECcchhhcchhHHHHhhhCCCEEEEecchhhcC-CcccCeEEEEeCHHHHHHHHHhc------------
Confidence 99 68 8999999974221 122 233457899999999984 344 799999999877665321
Q ss_pred HHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCC
Q 015729 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHIN 318 (401)
Q Consensus 239 ~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (401)
. .++++...++++.++++. ..++++.++++.++++++.+.|++.|+++... .+.++++.+++ .+
T Consensus 229 -----~---~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-----~~~~~~~~~~~-~~ 292 (335)
T 1uu1_A 229 -----L---PFNVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREMGYRITDS-----RGNFVFVFMEK-EE 292 (335)
T ss_dssp -----C---TTCSCHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCC-----CSSEEEEECCT-HH
T ss_pred -----C---CCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHCCcEEcCC-----CCeEEEEECCC-CC
Confidence 1 124666666666666654 22467788889999999999998887765321 23467788854 45
Q ss_pred HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 319 SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 319 ~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
..++.+.|.++ ||.+.+ .++++|+++. +++|+++++++|++
T Consensus 293 ~~~~~~~l~~~-gi~v~~-----~~~~iRis~~---~~~~i~~~~~~l~~ 333 (335)
T 1uu1_A 293 KERLLEHLRTK-NVAVRS-----FREGVRITIG---KREENDMILRELEV 333 (335)
T ss_dssp HHHHHHHHHHH-TEEEEE-----ETTEEEEECC---CHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHC-CEEEEE-----CCCeEEEEeC---CHHHHHHHHHHHHh
Confidence 67888988876 999987 2568999863 46889999998875
No 126
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.96 E-value=2.3e-28 Score=233.88 Aligned_cols=331 Identities=15% Similarity=0.026 Sum_probs=223.0
Q ss_pred CCcccccCCCcCChHHHHHHHccCcCC-CCCccHHHHHHHHHHHHHHHh-c---CCCCceEEecCChhHHHHHHHhccCC
Q 015729 8 GKNHLFVPGPVHIPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIF-K---TTSGTPFLIPTTGTGAWESALTNTLS 82 (401)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~-g---~~~~~~i~~~~g~t~a~~~~~~~~~~ 82 (401)
.+.++..+++.++++.+.+++.+.... ...+.......++++.+++++ + .+.++++++++|+++|+..++.++++
T Consensus 44 ~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~~~~ 123 (413)
T 3t18_A 44 LGTLLDDKGKIIALPSVYDRLDEMDRSHIASYAPIEGEKDYRKIVIDTLFGPYKPEGYISAIATPGGTGAIRSAIFSYLD 123 (413)
T ss_dssp SCCCBCTTSCBCCCHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHCC
T ss_pred ccCccCCCCCcCChHHHHHHHHhcCcccccCcCCCCCCHHHHHHHHHHHhcccCccccCcEEEcCccHHHHHHHHHHhcC
Confidence 344555556788889999988774321 111222233456777777755 2 22223699999999999999999999
Q ss_pred CCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeC-CCCCCCChHHHHHHHhccCCCCce-EEEEEec-CCCcccccchHHH
Q 015729 83 PGDRIISFLIGQFSLLWIDQQQRLNFNVDVVES-DWGEGAKLDVLASKLAADTAHTIK-AICIVHN-ETATGVTNNLSKV 159 (401)
Q Consensus 83 ~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~~d~~~le~~~~~~~~~~~~-~i~~~~~-~n~tG~~~~l~~i 159 (401)
+||+|+++.|.|+++. ..++..|++++.++. +.++.+|++++++.+++....+++ ++++++| +||||.+.+.+++
T Consensus 124 ~gd~Vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l 201 (413)
T 3t18_A 124 EGDPLICHDYYWAPYR--KICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEW 201 (413)
T ss_dssp SSCEEEEESSCCTHHH--HHHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHH
T ss_pred CCCEEEECCCCcccHH--HHHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHH
Confidence 9999999999877654 557778999999998 445589999999998751001346 7788888 9999999986665
Q ss_pred H---HHhh------hcCCCcEEEEecccccCcce------e--ccCcccc---eEEEecCCCccc-CCCcceEEEe---c
Q 015729 160 R---KLLD------EYRHPALFLVDGVSSICAID------F--RMDEWGI---DVALTGSQKALS-LPTGMGIVCA---S 215 (401)
Q Consensus 160 ~---~l~~------~~~~~~~li~D~a~~~~~~~------~--~~~~~~~---di~~~s~~K~l~-g~~g~G~l~~---~ 215 (401)
. ++|+ + +|++||+|++|...... + ....... .+++.|.+|.++ .+.++|++++ +
T Consensus 202 ~~l~~~~~~~~~~~~--~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~ 279 (413)
T 3t18_A 202 DEVITFLKEKAEDKD--KKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSS 279 (413)
T ss_dssp HHHHHHHHHHTTSTT--CEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESC
T ss_pred HHHHHHHHHHhhccC--CcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecCC
Confidence 5 5555 7 99999999997533211 0 1111112 377889999985 2334799998 8
Q ss_pred HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHH----HhcHHHHHHHHHHHHHHHHHHHHH
Q 015729 216 PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIF----EEGLENVIERHRRLGKATRLAVEA 291 (401)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~----~~g~~~~~~~~~~~~~~l~~~L~~ 291 (401)
+++.+.+.... .....+. ..+++...+.++.++++... ....++.++++.++.+++.+.|++
T Consensus 280 ~~~~~~~~~~~------------~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 345 (413)
T 3t18_A 280 KEIIEEFEASL------------AHSARCN--WSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKE 345 (413)
T ss_dssp HHHHHHHHHHH------------HHHHHHH--TSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH------------HHhhhcc--ccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877665320 0000010 12355555555555543321 122456778889999999999998
Q ss_pred cCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 292 WGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 292 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
+|+++..+. .+.++++.+ .+..++.+.|.++ ||.+.+| ++++||++.. .+++++ +++|.++++
T Consensus 346 ~g~~~~~~~----~~~~~~~~~---~~~~~~~~~l~~~-gv~v~~g-----~~~iRis~~~-~~~~~~---l~~l~~~l~ 408 (413)
T 3t18_A 346 NKLTMIPYF----GGFFTFIPT---DKAFDIVKDLEKE-NIFTIPS-----AKGIRVAICG-VGEEKI---PKLVQRLAF 408 (413)
T ss_dssp TTCCCBCCC----SSSCEEEEC---SCHHHHHHHHHHT-TEECEEC-----SSEEEECTTT-SCGGGH---HHHHHHHHH
T ss_pred cCCCccCCC----ceEEEEeCC---CCHHHHHHHHHhC-CEEEecC-----CCceEEEEee-CCHHHH---HHHHHHHHH
Confidence 888776542 344566655 3678899888655 9999886 5689997664 566665 777777776
Q ss_pred hc
Q 015729 372 DV 373 (401)
Q Consensus 372 ~~ 373 (401)
++
T Consensus 409 ~~ 410 (413)
T 3t18_A 409 YT 410 (413)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 127
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.96 E-value=1.7e-27 Score=230.02 Aligned_cols=356 Identities=14% Similarity=0.102 Sum_probs=245.2
Q ss_pred cccccCCCcCChHHHHHHHccCcCCCC-----------CccHHHHHHHHH-HHHHHHhcCCCCceEEecCChhHHHHHHH
Q 015729 10 NHLFVPGPVHIPDQVIRAMNRNNEDYR-----------SPAVPALTKTLL-EDIKKIFKTTSGTPFLIPTTGTGAWESAL 77 (401)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~~~-----------~~~~~~~~~~l~-~~la~~~g~~~~~~i~~~~g~t~a~~~~~ 77 (401)
...+.+++.+.+++|++++.+.....+ +....+..+++. +.+++++|.+. ..++++||++|+..++
T Consensus 47 ~i~l~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~~--~~v~~~sGs~a~~~a~ 124 (447)
T 3h7f_A 47 TLEMIASENFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAEF--ANVQPHSGAQANAAVL 124 (447)
T ss_dssp SEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSE--EECCCSSHHHHHHHHH
T ss_pred ceeEecCCCCCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCCCc--eEEEeCCHHHHHHHHH
Confidence 345677788889999999987553211 111222334555 99999999875 2344888999999999
Q ss_pred hccCCCCCeEEEEcCCcchHH-HHH--HHHHcCCcEEEEeCC-CCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccc
Q 015729 78 TNTLSPGDRIISFLIGQFSLL-WID--QQQRLNFNVDVVESD-WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVT 153 (401)
Q Consensus 78 ~~~~~~gd~vl~~~~~~~~~~-~~~--~~~~~g~~~~~v~~~-~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~ 153 (401)
.+++++||+|+++.++|.++. ... .....+..++.++.+ .++.+|++++++++++ .++++++++.++|+++.
T Consensus 125 ~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~---~~~~~i~~~~~~~~~~~- 200 (447)
T 3h7f_A 125 HALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALE---FRPKVIIAGWSAYPRVL- 200 (447)
T ss_dssp HHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHHHHHHHHH---HCCSEEEEECSSCCSCC-
T ss_pred HHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHHHHHHHHh---cCCeEEEEcCCCCCCcc-
Confidence 999999999999999876621 100 112234556666665 3457899999999965 24688888888888776
Q ss_pred cchHHHHHHhhhcCCCcEEEEecccccCcc----eeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCc
Q 015729 154 NNLSKVRKLLDEYRHPALFLVDGVSSICAI----DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVR 229 (401)
Q Consensus 154 ~~l~~i~~l~~~~~~~~~li~D~a~~~~~~----~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~ 229 (401)
++++|.++|++ +|+++|+|++|..|.. ..+.. .++|++++|.||+++|+.| |++++++++.+.+....
T Consensus 201 -~l~~i~~l~~~--~g~lli~Dea~~~g~~~~g~~~~~~-~~~di~~~s~sK~l~G~~g-G~i~~~~~~~~~l~~~~--- 272 (447)
T 3h7f_A 201 -DFAAFRSIADE--VGAKLLVDMAHFAGLVAAGLHPSPV-PHADVVSTTVHKTLGGGRS-GLIVGKQQYAKAINSAV--- 272 (447)
T ss_dssp -CHHHHHHHHHH--HTCEEEEECTTTHHHHHTTSSCCST-TTCSEEEEESSGGGCCCSC-EEEEECGGGHHHHHHHH---
T ss_pred -CHHHHHHHHHH--cCCEEEEECCchhhhhcCCCCCCCC-CCCcEEEecCCcCCCCCCe-EEEEECHHHHHHHhhhc---
Confidence 99999999999 9999999999865421 11111 2579999999999977766 99999988766554210
Q ss_pred cccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-----CCccccCCCccC
Q 015729 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-----GLKNCTQKEEWF 304 (401)
Q Consensus 230 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-----g~~~~~~~~~~~ 304 (401)
. .+..+++....++++.+++......+++...++..++++++.+.|.+. |+++.... .
T Consensus 273 ------------~--~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~---~ 335 (447)
T 3h7f_A 273 ------------F--PGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGG---T 335 (447)
T ss_dssp ------------T--TTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGS---C
T ss_pred ------------C--CcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCC---C
Confidence 0 011334555556777777766555456788899999999999999887 88876521 1
Q ss_pred CceeEEEEcC-CCCCHHHHHHHHHhhCCeEEc----cC--CCCCCCcEEEEeeccc----CCHHHHHHHHHHHHHHHHhc
Q 015729 305 SDTVTAVIVP-SHINSSEIVRRAWQRYNLSLG----LG--LNKVAGKVFRIGHLGH----LNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 305 ~~~~~~~~~~-~~~~~~~l~~~L~~~~~i~v~----~g--~~~~~~~~~Ri~~~~~----~~~~di~~~~~~i~~~l~~~ 373 (401)
...++++.+. .+.+...+.+.|. +.||.+. ++ ..+..+..+|+++... .+++|+++++++|++++++.
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~l~-~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~~~ 414 (447)
T 3h7f_A 336 DVHLVLVDLRDSPLDGQAAEDLLH-EVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALATG 414 (447)
T ss_dssp SSSEEEEECTTSSCCHHHHHHHHH-HTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHHSG
T ss_pred CCCEEEEEcCCCCCCHHHHHHHHH-HCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHhcc
Confidence 2235566663 3456666666665 4599988 55 3344456799987553 67999999999999999865
Q ss_pred CCCCCcchHHHHHHHHHHccCCCCCC
Q 015729 374 GYPVKLGSGVAAASAYLQNNIPMIPS 399 (401)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (401)
... + ...+...-.-|.++-|+.|.
T Consensus 415 ~~~-~-~~~~~~~v~~~~~~~~~~~~ 438 (447)
T 3h7f_A 415 SSV-D-VSALKDRATRLARAFPLYDG 438 (447)
T ss_dssp GGC-C-HHHHHHHHHHHHHHSCSSTT
T ss_pred Cch-h-HHHHHHHHHHHHHhCCCCCC
Confidence 321 2 34566667777888888764
No 128
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.96 E-value=7.4e-29 Score=239.61 Aligned_cols=303 Identities=10% Similarity=0.031 Sum_probs=208.8
Q ss_pred HHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHhccCCCCC--------------eEEEE-cCCcchHHHH--
Q 015729 43 LTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTLSPGD--------------RIISF-LIGQFSLLWI-- 100 (401)
Q Consensus 43 ~~~~l~~~la~~~----g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd--------------~vl~~-~~~~~~~~~~-- 100 (401)
...++++.+++++ |.. .++++++|+|+++|++.++.+++++|| +|+++ .++|+++...
T Consensus 84 g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~ 163 (444)
T 3if2_A 84 GDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHV 163 (444)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCS
T ss_pred CCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhccc
Confidence 3557777777776 322 334599999999999999999998888 78876 6776665410
Q ss_pred --HHHHHcCCcEEEEeCCC-C----CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCCCc
Q 015729 101 --DQQQRLNFNVDVVESDW-G----EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPA 170 (401)
Q Consensus 101 --~~~~~~g~~~~~v~~~~-~----~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~ 170 (401)
......|.+++.++.+. + +.+|++++++++.+.+ ++++++++++++||||.++| +++|.++|++ +|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~--~~~ 240 (444)
T 3if2_A 164 EGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKE-GRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKR--YDI 240 (444)
T ss_dssp SSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHT-TCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH--TTC
T ss_pred ccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcC-CCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHH--CCC
Confidence 02344577788888765 2 3689999998843211 46799999999999999998 7788899999 999
Q ss_pred EEEEecccccCccee-----ccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCC
Q 015729 171 LFLVDGVSSICAIDF-----RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGT 245 (401)
Q Consensus 171 ~li~D~a~~~~~~~~-----~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 245 (401)
++|+|++|+.+.... .....+.+++++|.||++.++.++|+++.++++.+.+.... ...
T Consensus 241 ~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~l~~~~~~~~------------~~~---- 304 (444)
T 3if2_A 241 PLIIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKIGLPGMRTGIIVADAKVIEAVSAMN------------AVV---- 304 (444)
T ss_dssp CEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTTTCGGGCCEEEECCHHHHHHHHHHH------------HHH----
T ss_pred EEEEECCCCCcccccccccccccCCCCEEEEechhhccCCCCceEEEEECHHHHHHHHHHH------------Hhc----
Confidence 999999997432211 11224678999999997544456799999998877664320 000
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHh-cHHH-HHHHHHHHHHHHHHHHHH-c-C--CccccCCCccCCceeEEEEcCC-CCC
Q 015729 246 FWPYTPSIQLLYGLRAALDLIFEE-GLEN-VIERHRRLGKATRLAVEA-W-G--LKNCTQKEEWFSDTVTAVIVPS-HIN 318 (401)
Q Consensus 246 ~~~~~~~~~~~~a~~~al~~~~~~-g~~~-~~~~~~~~~~~l~~~L~~-~-g--~~~~~~~~~~~~~~~~~~~~~~-~~~ 318 (401)
.++++...+.++.+.++..... ...+ .++++.++.+.+.+.|.+ + + +.+..+ ..+.++++.++. +.+
T Consensus 305 --~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~----~~g~~~~~~~~~~~~~ 378 (444)
T 3if2_A 305 --NLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKP----EGAIFLWLWFKDLPIS 378 (444)
T ss_dssp --HSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECC----CBSSEEEEEETTCSSC
T ss_pred --cCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecC----CccEEEEEEcCCCCCC
Confidence 1123333333333333321110 1122 556677788888888876 3 3 333332 234577888876 678
Q ss_pred HHHHHHHHHhhCCeEEccCCCCCC----------CcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 319 SSEIVRRAWQRYNLSLGLGLNKVA----------GKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 319 ~~~l~~~L~~~~~i~v~~g~~~~~----------~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
..++.+.|.++ ||.+.+|..+.. .+++||++.. +++++++++++|+++++++
T Consensus 379 ~~~l~~~l~~~-gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~--~~e~i~~~l~~l~~~~~~~ 440 (444)
T 3if2_A 379 TLDLYERLKAK-GTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA--DEQTLIDGIKVIGEVVREL 440 (444)
T ss_dssp HHHHHHHHHHT-TEECEEGGGSCTTCCCTTCSGGGSEEEEESSS--CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC-CeEEecchhhcCCCCCcccccCCCeEEEEEeC--CHHHHHHHHHHHHHHHHHH
Confidence 88999999765 999998854322 2579998876 9999999999999998754
No 129
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.96 E-value=8e-28 Score=228.55 Aligned_cols=332 Identities=14% Similarity=0.137 Sum_probs=232.1
Q ss_pred CcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc-CCCCCeEEEEcCCcc
Q 015729 17 PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPGDRIISFLIGQF 95 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~ 95 (401)
|. .++++++++.+...... ........++++.+++++|.+ .+++++||++|+..++.++ +++||+|+++.++|+
T Consensus 16 p~-~~~~~~~a~~~~~~~~~-~~~~~~~~~l~~~la~~~~~~---~~~~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~ 90 (393)
T 1mdo_A 16 PA-MGAEELAAVKTVLDSGW-ITTGPKNQELEAAFCRLTGNQ---YAVAVSSATAGMHIALMALGIGEGDEVITPSMTWV 90 (393)
T ss_dssp CC-CCHHHHHHHHHHHHHTC-CSSSHHHHHHHHHHHHHHCCS---EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCH
T ss_pred CC-CCHHHHHHHHHHHhcCC-cCCChHHHHHHHHHHHHhCCC---cEEEecChHHHHHHHHHHcCCCCCCEEEeCCCccH
Confidence 44 55677888777543221 123467889999999999975 3899999999999999988 899999999999988
Q ss_pred hHHHHHHHHHcCCcEEEEeCCCC-CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEE
Q 015729 96 SLLWIDQQQRLNFNVDVVESDWG-EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLV 174 (401)
Q Consensus 96 ~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~ 174 (401)
+.. ..++..|++++.++.+++ +.+|++++++++++ ++++++++ +++|.+.++++|.++|++ +|+++|+
T Consensus 91 ~~~--~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~----~~~~v~~~---~~~G~~~~~~~i~~l~~~--~~~~li~ 159 (393)
T 1mdo_A 91 STL--NMIVLLGANPVMVDVDRDTLMVTPEHIEAAITP----QTKAIIPV---HYAGAPADLDAIYALGER--YGIPVIE 159 (393)
T ss_dssp HHH--HHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT----TEEEECCB---CGGGCCCCHHHHHHHHHH--HTCCBCE
T ss_pred hHH--HHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCC----CceEEEEe---CCCCCcCCHHHHHHHHHH--cCCeEEE
Confidence 764 456778999999998865 57899999999874 56888776 479999999999999999 9999999
Q ss_pred ecccccCcceeccCccc-ceEEEecCC--CcccCCCcceEEEec-HHHHHHhccCCCCccccc-hHHH----HHHhhcCC
Q 015729 175 DGVSSICAIDFRMDEWG-IDVALTGSQ--KALSLPTGMGIVCAS-PKALEASKTAKSVRVFFD-WKDY----IKFYNLGT 245 (401)
Q Consensus 175 D~a~~~~~~~~~~~~~~-~di~~~s~~--K~l~g~~g~G~l~~~-~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~g~ 245 (401)
|++|+.|... +....+ .|++++|+| |+++++ ..|+++.+ +++.+++..........+ +..+ ...+..++
T Consensus 160 D~a~~~g~~~-~~~~~~~~d~~~~S~~k~K~l~~~-~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (393)
T 1mdo_A 160 DAAHATGTSY-KGRHIGARGTAIFSFHAIKNITCA-EGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLA 237 (393)
T ss_dssp ECTTCTTCEE-TTEETTSSSEEEEECCTTSSSCSS-SCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESS
T ss_pred ECccccCCeE-CCeecCCCCeEEEeCCCCCccccc-cceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccc
Confidence 9999976533 222345 899999988 999655 45888886 777776654322111100 0000 00111000
Q ss_pred C-CCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCC--CccCCceeEEEEcCC---CCCH
Q 015729 246 F-WPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQK--EEWFSDTVTAVIVPS---HINS 319 (401)
Q Consensus 246 ~-~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~--~~~~~~~~~~~~~~~---~~~~ 319 (401)
. +....+... +++......++++..++.+++.+++.+.|.++++++.... .....+.++++.+++ +.+.
T Consensus 238 ~g~~~~~~~~~-----~a~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 312 (393)
T 1mdo_A 238 PGYKYNLPDLN-----AAIALAQLQKLDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVDEARCGITR 312 (393)
T ss_dssp CCCBCCCCHHH-----HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECCHHHHSSCH
T ss_pred cCccCCCCHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCCCceeEEEEEEecccccccCH
Confidence 0 001123221 1221112224667788888899999999988776554221 111234567888864 5678
Q ss_pred HHHHHHHHhhCCeEEccCCCCC---------------------CCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 320 SEIVRRAWQRYNLSLGLGLNKV---------------------AGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 320 ~~l~~~L~~~~~i~v~~g~~~~---------------------~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.++.+.|.++ ||.++++..+. ....+|+++...+|++|+++++++|+++++.
T Consensus 313 ~~l~~~l~~~-gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~ 385 (393)
T 1mdo_A 313 DALMASLKTK-GIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAGQ 385 (393)
T ss_dssp HHHHHHHHHT-TBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHhC-CCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHhc
Confidence 8999999876 99998876431 1237999988889999999999999998754
No 130
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.96 E-value=2.8e-28 Score=238.15 Aligned_cols=349 Identities=12% Similarity=0.036 Sum_probs=237.0
Q ss_pred cccccCCCcCChHHHHHHHccCcCC---CC--CccHHHHHHHHHHHHHHHhcCCCC--------ceEEecCChhHHHHHH
Q 015729 10 NHLFVPGPVHIPDQVIRAMNRNNED---YR--SPAVPALTKTLLEDIKKIFKTTSG--------TPFLIPTTGTGAWESA 76 (401)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~l~~~la~~~g~~~~--------~~i~~~~g~t~a~~~~ 76 (401)
.+.+.+++...+..+.+++....+. ++ ++....+..++++.+++++|.+.. ..+++++|||+|+..+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~a 155 (486)
T 1js3_A 76 FFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVA 155 (486)
T ss_dssp BCSSSCCCCCHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHH
T ss_pred ceEeCCCCCCHHHHHHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHH
Confidence 4455555555555566666664322 11 233455666788888999998742 3588999999999888
Q ss_pred HhccCC---C------CC--------e--EEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCC--
Q 015729 77 LTNTLS---P------GD--------R--IISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTA-- 135 (401)
Q Consensus 77 ~~~~~~---~------gd--------~--vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~-- 135 (401)
+.+... + || + |+++.++|++.. ..++..|++++.++++.++.+|+++|++++++++.
T Consensus 156 l~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~--~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g 233 (486)
T 1js3_A 156 LLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVE--RAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAG 233 (486)
T ss_dssp HHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHH--HHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhhhhccCccchhcccCCCEEEEECCCCcHHHH--HHHHhCCCceEEeecCCCCCCCHHHHHHHHHHHHhCC
Confidence 755321 1 32 4 677888887653 66788899999999988889999999999986441
Q ss_pred CCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceec-cC-----cccceEEEecCCCcccCCCcc
Q 015729 136 HTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFR-MD-----EWGIDVALTGSQKALSLPTGM 209 (401)
Q Consensus 136 ~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~-~~-----~~~~di~~~s~~K~l~g~~g~ 209 (401)
.++.++++++++|++|.+.|+++|.++|++ +|+++|+|++|+.+....+ .. -.++|++++++||+++++.|+
T Consensus 234 ~~p~~vv~~~~~n~tG~~~~l~~I~~la~~--~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~ 311 (486)
T 1js3_A 234 LIPFFVVATLGTTSCCSFDNLLEVGPICHE--EDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDC 311 (486)
T ss_dssp CEEEEEEEEBSCTTTCCBCCHHHHHHHHHH--TTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSC
T ss_pred CCceEEEEeCCCCCCCCCCCHHHHHHHHHH--cCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcce
Confidence 123588999999999999999999999999 9999999999987654321 11 136899999999999888899
Q ss_pred eEEEecHHH--HHHhccCCCCccccchHHH-----HHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHH
Q 015729 210 GIVCASPKA--LEASKTAKSVRVFFDWKDY-----IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLG 282 (401)
Q Consensus 210 G~l~~~~~~--~~~~~~~~~~~~~~~~~~~-----~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~ 282 (401)
|+++++++. .+.+.. ... |...... ......+ ...+.. ....++.+++..+...++++..++..+++
T Consensus 312 G~l~~~~~~~l~~~~~~-~~~--yl~~~~~~~~~~~~~~~~~--~~~~rr-~~~~~~~~al~~~g~~g~~~~~~~~~~~a 385 (486)
T 1js3_A 312 SAMWVKRRTDLTGAFKL-DPV--YLKHSHQGSGLITDYRHWQ--LPLGRR-FRSLKMWFVFRMYGVKGLQAYIRKHVQLS 385 (486)
T ss_dssp EEEEESCHHHHHGGGC---------------CCSCCCGGGSS--SCSCCC-CTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCHHHHHHHhcC-Cch--hhCCCcccccCCCCccccC--CCCCCc-hhHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 999997653 233321 110 1000000 0000000 011111 12457777888777778899999999999
Q ss_pred HHHHHHHHHc-CCccccCCCccCCceeEEEEcCCC-CCHHHHHHHHHhhCCeEE-ccCCCCCCCcEEEEeecc-cCCHHH
Q 015729 283 KATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSH-INSSEIVRRAWQRYNLSL-GLGLNKVAGKVFRIGHLG-HLNELQ 358 (401)
Q Consensus 283 ~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~~~i~v-~~g~~~~~~~~~Ri~~~~-~~~~~d 358 (401)
+++.+.|++. |+++..+. .. .++.|.++.. ....++.+.|.++ |+.+ .++.. ....++|+++.. ..+++|
T Consensus 386 ~~l~~~L~~~~~~~~~~~~---~~-~~v~f~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~-~~~~~lRi~~~~~~~t~~d 459 (486)
T 1js3_A 386 HEFEAFVLQDPRFEVCAEV---TL-GLVCFRLKGSDGLNEALLERINSA-RKIHLVPCRL-RGQFVLRFAICSRKVESGH 459 (486)
T ss_dssp HHHHHHHHHCTTEEECSCC---CS-SEEEEEESSCHHHHHHHHHHHHHH-TSCBCEEEEE-TTEEEEEEECCCTTCCHHH
T ss_pred HHHHHHHhcCCCeEEeCCC---ce-eEEEEEecChHHHHHHHHHHHHhc-CCEEEEEEEE-CCEEEEEEEeCCCCCCHHH
Confidence 9999999997 88876531 22 3566776421 0146788888877 5433 33221 124579998644 578999
Q ss_pred HHHHHHHHHHHHHhcC
Q 015729 359 LLGCLAGVEMILKDVG 374 (401)
Q Consensus 359 i~~~~~~i~~~l~~~~ 374 (401)
+++++++|+++++++.
T Consensus 460 i~~~~~~l~~~~~~~~ 475 (486)
T 1js3_A 460 VRLAWEHIRGLAAELL 475 (486)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999987653
No 131
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.96 E-value=1.5e-28 Score=235.85 Aligned_cols=321 Identities=9% Similarity=-0.002 Sum_probs=222.5
Q ss_pred CChHHHHHHHccCc---C--CCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHH--HHHHhccCCC--------
Q 015729 19 HIPDQVIRAMNRNN---E--DYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAW--ESALTNTLSP-------- 83 (401)
Q Consensus 19 ~~~~~v~~a~~~~~---~--~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~--~~~~~~~~~~-------- 83 (401)
+.++.+++++.+.. . ....|.......++++.++++++.+++ ++++|+|+++++ ..++..+..+
T Consensus 48 ~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~ 126 (422)
T 3d6k_A 48 DLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEALGLPAD-LVVAQDGSSLNIMFDLISWSYTWGNNDSSRPW 126 (422)
T ss_dssp HTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHHTCCGG-GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCG
T ss_pred CCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHhCCChh-HEEEecchHHHHHHHHHHHHhcCccccccccc
Confidence 55566777776531 1 112333334467999999999998754 499999999997 5555555544
Q ss_pred ----CCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEE-EEecCCCcccccchH-
Q 015729 84 ----GDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAIC-IVHNETATGVTNNLS- 157 (401)
Q Consensus 84 ----gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~-~~~~~n~tG~~~~l~- 157 (401)
+|+|+++.|+|+++. ..++..|++++.++.+.++ +|++++++.+++ .++++++ +++++||||.+++.+
T Consensus 127 ~~~d~~~Vl~~~p~y~~~~--~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~---~~~~~v~~~~~~~NPtG~~~~~~~ 200 (422)
T 3d6k_A 127 SAEEKVKWLCPVPGYDRHF--TITEHFGFEMINVPMTDEG-PDMGVVRELVKD---PQVKGMWTVPVFGNPTGVTFSEQT 200 (422)
T ss_dssp GGSSCCEEEEEESCCHHHH--HHHHHHTCEEEEEEEETTE-ECHHHHHHHHTS---TTEEEEEECCSSCTTTCCCCCHHH
T ss_pred ccCCCCEEEEeCCccHHHH--HHHHHcCCEEEecCCCCCC-CCHHHHHHHHhc---CCCeEEEEcCCCCCCCCCCCCHHH
Confidence 347999999877664 5577789999999987664 899999999964 3578887 688999999999876
Q ss_pred --HHHHHhh-hcCCCcEEEEecccccCcc-----e-ecc-------CcccceEEEecCCCcccCCCcceEEEecHHHHHH
Q 015729 158 --KVRKLLD-EYRHPALFLVDGVSSICAI-----D-FRM-------DEWGIDVALTGSQKALSLPTGMGIVCASPKALEA 221 (401)
Q Consensus 158 --~i~~l~~-~~~~~~~li~D~a~~~~~~-----~-~~~-------~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~ 221 (401)
+|.++|+ + +|++||+|++|+.+.+ + ... +..+.++++.|.+|++.++.++|++++++++.+.
T Consensus 201 l~~l~~~~~~~--~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~~~l~~~ 278 (422)
T 3d6k_A 201 CRELAEMSTAA--PDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASSKENIEW 278 (422)
T ss_dssp HHHHHHCCCSS--TTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECCHHHHHH
T ss_pred HHHHHHHHhhc--cCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEEEeCHHHHHH
Confidence 6777777 7 9999999999973111 0 111 2345689999999975434458999999988776
Q ss_pred hccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHH--HhcHHHHHHHHHHHHHHHHHHHHH----cC-C
Q 015729 222 SKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIF--EEGLENVIERHRRLGKATRLAVEA----WG-L 294 (401)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~--~~g~~~~~~~~~~~~~~l~~~L~~----~g-~ 294 (401)
+.... .. +.++.+...+.++.++++... ...+++.+++++++.+.+.+.|.+ .| +
T Consensus 279 l~~~~-------------~~-----~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~ 340 (422)
T 3d6k_A 279 YASHA-------------NV-----RGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVA 340 (422)
T ss_dssp HHHHH-------------HH-----HCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred HHHHH-------------Hh-----hcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCce
Confidence 65320 00 012355555455555554211 123556677777788888888865 22 3
Q ss_pred ccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccC-CCC-----CCCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 295 KNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLG-LNK-----VAGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g-~~~-----~~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
.+..+ ..+.++++.++.. +..++.+.|.++ ||.+.++ ... ...+++||++.. .+++++++++++|++
T Consensus 341 ~~~~p----~~g~~~~~~~~~~-~~~~~~~~l~~~-gV~v~~~g~~f~~~~~~~~~~iRis~~~-~~~e~i~~~~~~l~~ 413 (422)
T 3d6k_A 341 KWTSP----TGGYFISVDVVPG-TASRVVELAKEA-GIALTGAGSSFPLHNDPNNENIRLAPSL-PPVAELEVAMDGFAT 413 (422)
T ss_dssp EECCC----SBSSCEEEEESTT-CHHHHHHHHHHT-TEECCCTTTTSGGGCCTTSCEEEECCSS-SCHHHHHHHHHHHHH
T ss_pred EEeCC----CcceEEEEECCCC-CHHHHHHHHHHC-CeEEEcCccccCCCCCCCCCeEEEecCC-CCHHHHHHHHHHHHH
Confidence 43332 2345788888654 567787777655 9999984 322 124789998876 799999999999999
Q ss_pred HHHhc
Q 015729 369 ILKDV 373 (401)
Q Consensus 369 ~l~~~ 373 (401)
+++++
T Consensus 414 ~l~~~ 418 (422)
T 3d6k_A 414 CVLMA 418 (422)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88754
No 132
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.96 E-value=1.7e-29 Score=238.56 Aligned_cols=331 Identities=11% Similarity=0.039 Sum_probs=230.7
Q ss_pred ccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc-CCCCCeEEE
Q 015729 11 HLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPGDRIIS 89 (401)
Q Consensus 11 ~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~-~~~gd~vl~ 89 (401)
..++.++..+++++++++.+...... +.......++++.+++++|.+ .+++++|||+|++.++.++ +++||+|++
T Consensus 6 ~~l~~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~~l~~~la~~~~~~---~~i~~~sgt~al~~~l~~l~~~~gd~Vi~ 81 (373)
T 3frk_A 6 ASFKPMHDEIEYEIKFKFEEIYKRNW-FILGDEDKKFEQEFADYCNVN---YCIGCGNGLDALHLILKGYDIGFGDEVIV 81 (373)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHTC-CSSSHHHHHHHHHHHHHHTSS---EEEEESCHHHHHHHHHHHTTCCTTCEEEE
T ss_pred cCCCcccCCCCHHHHHHHHHHHHCCC-ccCCchHHHHHHHHHHHhCCC---eEEEeCCHHHHHHHHHHHcCCCCcCEEEE
Confidence 34556666778888888877543222 234567889999999999986 3899999999999999888 899999999
Q ss_pred EcCCcchHHHHHHHHHcCCcEEEEeCC-CCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCC
Q 015729 90 FLIGQFSLLWIDQQQRLNFNVDVVESD-WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRH 168 (401)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~ 168 (401)
+.++|++.. ..++..|++++.++.+ .++.+|++++++++++ ++++++ ++||+|...|+++|.++|++ +
T Consensus 82 ~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~v~---~~n~~G~~~~l~~i~~l~~~--~ 150 (373)
T 3frk_A 82 PSNTFIATA--LAVSYTGAKPIFVEPDIRTYNIDPSLIESAITE----KTKAII---AVHLYGQPADMDEIKRIAKK--Y 150 (373)
T ss_dssp ETTSCTHHH--HHHHHHSCEEEEECEETTTTEECGGGTGGGCCT----TEEEEE---EECCTTCCCCHHHHHHHHHH--H
T ss_pred CCCCcHHHH--HHHHHcCCEEEEEeccccccCcCHHHHHHhcCC----CCeEEE---EECCCcCcccHHHHHHHHHH--c
Confidence 999988865 4467789999999987 4567899999998864 567777 56799999999999999999 9
Q ss_pred CcEEEEecccccCcceeccCccc--ceEEEec--CCCcccCCCcceEEEecH-HHHHHhccCCCCccccchHHHHHHhhc
Q 015729 169 PALFLVDGVSSICAIDFRMDEWG--IDVALTG--SQKALSLPTGMGIVCASP-KALEASKTAKSVRVFFDWKDYIKFYNL 243 (401)
Q Consensus 169 ~~~li~D~a~~~~~~~~~~~~~~--~di~~~s--~~K~l~g~~g~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (401)
|+++|+|++|+.|.. ++....+ .|++++| .+|++++....|+++.++ ++.+++...........+ .....
T Consensus 151 ~~~li~D~a~~~g~~-~~~~~~~~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~ 225 (373)
T 3frk_A 151 NLKLIEDAAQAHGSL-YKGMKVGSLGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEKIKALSNYGSEKKY----HHIYK 225 (373)
T ss_dssp TCEEEEECTTCTTCE-ETTEETTSSSSEEEEECCTTSSSCCSSSCEEEEESCHHHHHHHHHHHBTTCSBTT----BCCSC
T ss_pred CCEEEEECCcccCCE-ECCEeccccccEEEEeCcCCCccCccceeEEEEeCCHHHHHHHHHHHhcCcccCC----ccccc
Confidence 999999999998765 4544445 6888888 669996523347877764 455444322110000000 00001
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCC-ccCCceeEEEEcCCCCCHHHH
Q 015729 244 GTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKE-EWFSDTVTAVIVPSHINSSEI 322 (401)
Q Consensus 244 g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l 322 (401)
|. .+..+ .+.+++......++++..++.+++.+++.+.|.++++.+..... ....+..+.+..+ +..++
T Consensus 226 g~--~~~~~-----~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l 295 (373)
T 3frk_A 226 GF--NSRLD-----ELQAGFLRVKLKYLDKWNEERRKIAQKYIAGINNPNVIIPVEADYAKHVWYTFVIRSE---KRDEL 295 (373)
T ss_dssp CC--BCCCC-----HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCCTTEECCCCCTTEECCCSSEEEEES---SHHHH
T ss_pred cc--cCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEeccCCCCCceeeEEEEEEeC---CHHHH
Confidence 11 11122 33444444444567778888889999999888776633322111 1122223334432 67889
Q ss_pred HHHHHhhCCeEEccCCC-CC----------------------CCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 323 VRRAWQRYNLSLGLGLN-KV----------------------AGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 323 ~~~L~~~~~i~v~~g~~-~~----------------------~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.+.|.++ ||.+++++. +. ....+|+++...+|++|+|+++++|+++..+
T Consensus 296 ~~~L~~~-gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~ 367 (373)
T 3frk_A 296 QKYLNNN-GIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLE 367 (373)
T ss_dssp HHHHHHT-TBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC--
T ss_pred HHHHHHC-CCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhh
Confidence 9999877 999987652 10 0156999999999999999999999887543
No 133
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.96 E-value=4.4e-28 Score=232.33 Aligned_cols=339 Identities=14% Similarity=0.103 Sum_probs=230.5
Q ss_pred CCcCChHHHHHHHccCcCC---C-CC--ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc-CCCCCeEE
Q 015729 16 GPVHIPDQVIRAMNRNNED---Y-RS--PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPGDRII 88 (401)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~---~-~~--~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~-~~~gd~vl 88 (401)
...++++++++++.+.... . +. ....+...++++.+++++|.+. .++++|||+|+..++.++ +++||+|+
T Consensus 10 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~---~i~~~~gt~al~~~~~~~~~~~gd~Vl 86 (418)
T 2c81_A 10 EWPQHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGVPY---CVPTTSGSTALMLALEALGIGEGDEVI 86 (418)
T ss_dssp CSSCCCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTCSE---EEEESCHHHHHHHHHHHTTCCTTCEEE
T ss_pred CCCCCCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCCCc---EEEeCCHHHHHHHHHHHcCCCCcCEEE
Confidence 3445567777777663211 1 11 1223457899999999999872 677888999999999888 89999999
Q ss_pred EEcCCcchHHHHHHHHHcCCcEEEEeCCC-CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcC
Q 015729 89 SFLIGQFSLLWIDQQQRLNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYR 167 (401)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~ 167 (401)
++.++|++.. ..++..|++++.++.+. ++.+|++++++++++ ++++|+++ ||+|...++++|.++|++
T Consensus 87 ~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~----~~~~v~~~---~~~G~~~~~~~i~~~~~~-- 155 (418)
T 2c81_A 87 VPSLTWIATA--TAVLNVNALPVFVDVEADTYCIDPQLIKSAITD----KTKAIIPV---HLFGSMANMDEINEIAQE-- 155 (418)
T ss_dssp EESSSCTHHH--HHHHHTTCEEEEECBCTTTCSBCHHHHGGGCCT----TEEEECCB---CCTTCCCCHHHHHHHHHH--
T ss_pred ECCCccHhHH--HHHHHcCCEEEEEecCCCCCCcCHHHHHHhhCC----CCeEEEEe---CCcCCcccHHHHHHHHHH--
Confidence 9999988775 45677899999999886 567899999998863 56887764 589999999999999999
Q ss_pred CCcEEEEecccccCcceeccC---cc-cceEEEecCCCcccCCCcceEEEec-HHHHHHhccCCCCcccc-chHH-HHHH
Q 015729 168 HPALFLVDGVSSICAIDFRMD---EW-GIDVALTGSQKALSLPTGMGIVCAS-PKALEASKTAKSVRVFF-DWKD-YIKF 240 (401)
Q Consensus 168 ~~~~li~D~a~~~~~~~~~~~---~~-~~di~~~s~~K~l~g~~g~G~l~~~-~~~~~~~~~~~~~~~~~-~~~~-~~~~ 240 (401)
+|++||+|++|+.+.. ++.. .. .+++.++|+||+++++ ..|+++.+ +++.+++.......... .+.. ....
T Consensus 156 ~~~~li~D~a~~~~~~-~~~~~~~~~~~~~~~s~s~~K~~~~g-~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 233 (418)
T 2c81_A 156 HNLFVIEDCAQSHGSV-WNNQRAGTIGDIGAFSCQQGKVLTAG-EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHG 233 (418)
T ss_dssp TTCEEEEECTTCTTCE-ETTEETTSSSSEEEEECCTTSSSCSS-SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTT
T ss_pred CCCEEEEECcccccCc-cCCEecccccceEEEeccCCcccCCC-CeEEEEECCHHHHHHHHHHHHhCccccccccccccc
Confidence 9999999999998763 2211 11 1455555669999764 56888884 67666554321110000 0000 0000
Q ss_pred hh--cC--CCCCCC--CcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCC-C-ccCCceeEEE
Q 015729 241 YN--LG--TFWPYT--PSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQK-E-EWFSDTVTAV 311 (401)
Q Consensus 241 ~~--~g--~~~~~~--~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~-~~~~~~~~~~ 311 (401)
+. .+ .....+ .+. +.+++......++++..++.+++.+++.+.|.++ |+++.... . ....+.++.+
T Consensus 234 ~~~~~~~~~~~g~~~~~~~-----~~aa~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~ 308 (418)
T 2c81_A 234 DMQLVKKGDIQGSNYCLSE-----FQSAILLDQLQELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVF 308 (418)
T ss_dssp CBSEEECCSSCCCBCCCCH-----HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEE
T ss_pred hhhccccccccCcCCCcCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEE
Confidence 00 00 000000 111 2233333333456778888888999999999887 77765322 2 1223345657
Q ss_pred EcCC----CCCHHHHHHHHHhhCCeE---EccCCCCC---------------------------C---------CcEEEE
Q 015729 312 IVPS----HINSSEIVRRAWQRYNLS---LGLGLNKV---------------------------A---------GKVFRI 348 (401)
Q Consensus 312 ~~~~----~~~~~~l~~~L~~~~~i~---v~~g~~~~---------------------------~---------~~~~Ri 348 (401)
.+++ +.+..++.+.|.+++||. +++++.+. . .+.+||
T Consensus 309 ~~~~~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl 388 (418)
T 2c81_A 309 RFDPVKFGGLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVI 388 (418)
T ss_dssp EECGGGTTTCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEE
T ss_pred EEccccccccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEe
Confidence 7764 568889999998766999 87765321 0 147999
Q ss_pred eecccC-CHHHHHHHHHHHHHHHHhcCC
Q 015729 349 GHLGHL-NELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 349 ~~~~~~-~~~di~~~~~~i~~~l~~~~~ 375 (401)
++...+ |++|+++++++|+++++++++
T Consensus 389 ~~~~~~gt~edi~~~~~~l~~~~~~~~~ 416 (418)
T 2c81_A 389 HHAILLAEPSHLSLLVDAVAELARKFCV 416 (418)
T ss_dssp EGGGGGSCHHHHHHHHHHHHHHHHTTC-
T ss_pred cCCccCCCHHHHHHHHHHHHHHHHhhcc
Confidence 999999 999999999999999987643
No 134
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.96 E-value=1.7e-28 Score=233.89 Aligned_cols=324 Identities=14% Similarity=0.057 Sum_probs=216.4
Q ss_pred cCChHHHHHHHccCcC------CCCCccHHHHHHHHHHHHHHH--hc-CCCCceEEecCChhHHHHHHHhccCCCCCeEE
Q 015729 18 VHIPDQVIRAMNRNNE------DYRSPAVPALTKTLLEDIKKI--FK-TTSGTPFLIPTTGTGAWESALTNTLSPGDRII 88 (401)
Q Consensus 18 ~~~~~~v~~a~~~~~~------~~~~~~~~~~~~~l~~~la~~--~g-~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl 88 (401)
.+.++.+++++.+... ....+.......++++.++++ .| .++ +++++++|+++++..++ .++++||+|+
T Consensus 45 ~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~g~~~~-~~v~~~~G~~~al~~~~-~~~~~gd~Vl 122 (400)
T 3asa_A 45 QPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFYRGFVDA-KEIFISDGAKVDLFRLL-SFFGPNQTVA 122 (400)
T ss_dssp CCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTSTTSSCG-GGEEEESCHHHHHHHHH-HHHCSSCEEE
T ss_pred CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHcCCCCH-HHEEEccChHHHHHHHH-HHcCCCCEEE
Confidence 3567777777766321 111232234467899999999 46 443 45999999999999864 5568999999
Q ss_pred EEcCCcchHHHHHHHHHcCCc-EEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhh
Q 015729 89 SFLIGQFSLLWIDQQQRLNFN-VDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLD 164 (401)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g~~-~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~ 164 (401)
++.++|++.. ..++..|++ ++.++.+.++.++++ +++ + ++++++++++++||||.++| +++|.++|+
T Consensus 123 ~~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~-l~~-~-----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~ 193 (400)
T 3asa_A 123 IQDPSYPAYL--DIARLTGAKEIIALPCLQENAFFPE-FPE-D-----THIDILCLCSPNNPTGTVLNKDQLRAIVHYAI 193 (400)
T ss_dssp EEESCCHHHH--HHHHHTTCSEEEEEECCGGGTTCCC-CCT-T-----CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred ECCCCcHHHH--HHHHHcCCcceEecccchhcCcccC-hhh-c-----cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHH
Confidence 9999887754 456778998 999998754333322 221 1 35789999999999999997 556888899
Q ss_pred hcCCCcEEEEecccccCc----ceeccCc----ccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchH
Q 015729 165 EYRHPALFLVDGVSSICA----IDFRMDE----WGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWK 235 (401)
Q Consensus 165 ~~~~~~~li~D~a~~~~~----~~~~~~~----~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~ 235 (401)
+ +|+++|+|++|+... .+..... .+.++++.|.+|+++ ++.++|+++++++..+... .+..
T Consensus 194 ~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~--------~~~~ 263 (400)
T 3asa_A 194 E--HEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADG--------HFVI 263 (400)
T ss_dssp H--TTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTS--------CBHH
T ss_pred H--cCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchh--------hhHH
Confidence 9 999999999998321 1122222 235688999999984 3334799999887621100 0011
Q ss_pred HHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEE-cC
Q 015729 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVI-VP 314 (401)
Q Consensus 236 ~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-~~ 314 (401)
.........+ .++.+...+.++.++++. ..+++.++++.++++++.+.|+++|+++..+. .+.++++. +|
T Consensus 264 ~~~~~~~~~~--~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~~~~~~~~~~ 334 (400)
T 3asa_A 264 QDWERFLSTT--FNGASIPAQEAGVAGLSI---LPQLEAIHYYRENSDLLRKALLATGFEVFGGE----HAPYLWVKPTQ 334 (400)
T ss_dssp HHHHHHHHHH--CCCCCHHHHHHHHHHHHH---TTTCHHHHHHHHHHHHHHHHHHHTTCEEEECS----SSSEEEEECCC
T ss_pred HHHHHHhccC--ccCCChHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHCCCeeeCCC----CceEEEEeccC
Confidence 1101000000 123555555555555543 24677888999999999999998887765432 23578888 87
Q ss_pred CCCCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 315 SHINSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 315 ~~~~~~~l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
++.+..++...|.+++||.+.+|..+ ..++++||++ ..+++++++++++|++++++.
T Consensus 335 ~~~~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~--~~~~e~i~~~l~~l~~~~~~~ 393 (400)
T 3asa_A 335 ANISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSS--LGKREDILAACERLQMAPALQ 393 (400)
T ss_dssp TTCCTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEEC--CSCHHHHHHHHHHHHC-----
T ss_pred CCCCHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEe--eCCHHHHHHHHHHHHHHHHhh
Confidence 66666778888876669999988442 2356899984 358999999999999888653
No 135
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.96 E-value=2e-27 Score=227.65 Aligned_cols=330 Identities=16% Similarity=0.136 Sum_probs=225.9
Q ss_pred ccccCCCcCChHHHHHHHccCcCCCC--C----------ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHh
Q 015729 11 HLFVPGPVHIPDQVIRAMNRNNEDYR--S----------PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT 78 (401)
Q Consensus 11 ~~~~~~p~~~~~~v~~a~~~~~~~~~--~----------~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~ 78 (401)
..+.++....++.|++++.+...... + .........+++.+++++|.+.. .+++++|++|+..++.
T Consensus 33 ~~~~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~--~v~~~sGs~a~~~a~~ 110 (420)
T 3gbx_A 33 IELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYA--NVQPHSGSQANFAVYT 110 (420)
T ss_dssp EECCTTCCCCCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTCSEE--ECCCSSHHHHHHHHHH
T ss_pred eeeeccCCCCCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCCCCc--eeEecCcHHHHHHHHH
Confidence 34455555579999999988652211 0 01123345567899999998653 2344566999999999
Q ss_pred ccCCCCCeEEEEcCCcchHH-HHHH--HHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc
Q 015729 79 NTLSPGDRIISFLIGQFSLL-WIDQ--QQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN 155 (401)
Q Consensus 79 ~~~~~gd~vl~~~~~~~~~~-~~~~--~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~ 155 (401)
+++++||+|++..+.|.++. .... ....+...+.++.+.++.+|++++++++++. +++++++++++|+ ...|
T Consensus 111 ~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~---~~~~v~~~~~~~~--~~~~ 185 (420)
T 3gbx_A 111 ALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEH---KPKMIIGGFSAYS--GVVD 185 (420)
T ss_dssp HHCCTTCEEEEEEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHH---CCSEEEECCTTCC--SCCC
T ss_pred HhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHhc---CCeEEEEecCccC--CccC
Confidence 99999999999999877643 1111 1223345556666767779999999999862 4689999887775 4789
Q ss_pred hHHHHHHhhhcCCCcEEEEecccccCcc-----eeccCcccceEEEecCCCcccCCCcceEEEecH---HHHHHhccCCC
Q 015729 156 LSKVRKLLDEYRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLPTGMGIVCASP---KALEASKTAKS 227 (401)
Q Consensus 156 l~~i~~l~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~---~~~~~~~~~~~ 227 (401)
+++|.++|++ +|+++|+|++|+.+.. +.... .+|++++|.||+++|+.| |+++.++ ++.+.+...
T Consensus 186 l~~l~~l~~~--~~~~li~De~~~~~~~~~~~~~~~~~--~~di~~~s~sK~~~g~~g-g~~~~~~~~~~~~~~~~~~-- 258 (420)
T 3gbx_A 186 WAKMREIADS--IGAYLFVDMAHVAGLIAAGVYPNPVP--HAHVVTTTTHKTLAGPRG-GLILAKGGDEELYKKLNSA-- 258 (420)
T ss_dssp HHHHHHHHHH--TTCEEEEECTTTHHHHHTTSSCCSTT--TSSEEEEESSGGGCSCSC-EEEEESSCCHHHHHHHHHH--
T ss_pred HHHHHHHHHH--cCCEEEEECCcchhceecccCCcccc--cCCEEEeecccCCCCCCc-eEEEEcCCcHHHHHHhhhh--
Confidence 9999999999 9999999999875533 22222 489999999999976766 9999987 655544321
Q ss_pred CccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCce
Q 015729 228 VRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDT 307 (401)
Q Consensus 228 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 307 (401)
...+ ..++++...++++..++......++++.+++..++++++.+.|.+.|+++.... ....
T Consensus 259 -------------~~~~--~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~ 320 (420)
T 3gbx_A 259 -------------VFPS--AQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNRGYKVVSGG---TENH 320 (420)
T ss_dssp -------------HC------CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGS---CSSS
T ss_pred -------------cCCC--CCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhcCCeeccCC---CCCe
Confidence 0001 123455666666666665544445678899999999999999998888776521 1234
Q ss_pred eEEEEcCC-CCCHHHHHHHHHhhCCeEEccCC------CCCCCcEEEEeeccc----CCHHHHHHHHHHHHHHHHhc
Q 015729 308 VTAVIVPS-HINSSEIVRRAWQRYNLSLGLGL------NKVAGKVFRIGHLGH----LNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 308 ~~~~~~~~-~~~~~~l~~~L~~~~~i~v~~g~------~~~~~~~~Ri~~~~~----~~~~di~~~~~~i~~~l~~~ 373 (401)
++++.++. +.+...+.+.|.++ ||.+.+.. .+..+..+||++... .+++++++++++|++++++.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 396 (420)
T 3gbx_A 321 LFLLDLVDKNLTGKEADAALGRA-NITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNI 396 (420)
T ss_dssp EEEEECGGGTCCHHHHHHHHHHT-TEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEcCCCCCCHHHHHHHHHHC-CcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHHHHhCc
Confidence 66677643 45677788888654 99988721 122345699987653 46899999999999999875
No 136
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.96 E-value=1e-27 Score=228.37 Aligned_cols=331 Identities=15% Similarity=0.050 Sum_probs=230.4
Q ss_pred cccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc-CCCCCeEEEE
Q 015729 12 LFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPGDRIISF 90 (401)
Q Consensus 12 ~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~-~~~gd~vl~~ 90 (401)
.+..+....++.+++++.+..... .+.......++++.+++++|.+ .+++++||++|+..++.++ +++||+|+++
T Consensus 34 d~~~~~~~~~~~v~~a~~~~~~~~-~y~~~~~~~~l~~~la~~~~~~---~~v~~~~Gt~a~~~~l~~~~~~~gd~vl~~ 109 (399)
T 2oga_A 34 DLKAAYEELRAETDAAIARVLDSG-RYLLGPELEGFEAEFAAYCETD---HAVGVNSGMDALQLALRGLGIGPGDEVIVP 109 (399)
T ss_dssp CHHHHHHHTHHHHHHHHHHHHHHT-CCSSSHHHHHHHHHHHHHTTSS---EEEEESCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred ccCcCCCCCCHHHHHHHHHHHhcC-CCCCchhHHHHHHHHHHHHCCC---eEEEecCHHHHHHHHHHHhCCCCcCEEEEC
Confidence 444555555688888888754321 1222366789999999999886 3778888999999999888 8999999999
Q ss_pred cCCcchHHHHHHHHHcCCcEEEEeCCC-CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCC
Q 015729 91 LIGQFSLLWIDQQQRLNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHP 169 (401)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~ 169 (401)
.++|++.. ..++..|++++.++.++ ++.+|++++++++++ ++++|+ ++||||.+.|+++|.++|++ +|
T Consensus 110 ~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~----~~~~v~---~~n~tG~~~~l~~i~~l~~~--~~ 178 (399)
T 2oga_A 110 SHTYIASW--LAVSATGATPVPVEPHEDHPTLDPLLVEKAITP----RTRALL---PVHLYGHPADMDALRELADR--HG 178 (399)
T ss_dssp SSSCTHHH--HHHHHTTCEEEEECBCSSSSSBCHHHHHHHCCT----TEEEEC---CBCGGGCCCCHHHHHHHHHH--HT
T ss_pred CCccHHHH--HHHHHCCCEEEEEecCCCCCCcCHHHHHHhcCC----CCeEEE---EeCCcCCccCHHHHHHHHHH--cC
Confidence 99888754 45677899999999876 467899999999874 567766 46799999999999999999 99
Q ss_pred cEEEEecccccCcceeccCccc--ceEEEecC--CCcccCCCcceEEEec-HHHHHHhccCCCCccccchHHHHHHhhcC
Q 015729 170 ALFLVDGVSSICAIDFRMDEWG--IDVALTGS--QKALSLPTGMGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLG 244 (401)
Q Consensus 170 ~~li~D~a~~~~~~~~~~~~~~--~di~~~s~--~K~l~g~~g~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 244 (401)
+++|+|++|+.+... +....+ .|++++|. +|+++++...|+++.+ +++.+++........... +...
T Consensus 179 ~~li~Dea~~~g~~~-~~~~~~~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l~~~~~~g~~~~-------~~~~ 250 (399)
T 2oga_A 179 LHIVEDAAQAHGARY-RGRRIGAGSSVAAFSFYPGKNLGCFGDGGAVVTGDPELAERLRMLRNYGSRQK-------YSHE 250 (399)
T ss_dssp CEECEECTTCTTCEE-TTEETTCTTCEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHHBTTCSST-------TCCC
T ss_pred CEEEEECcccccCcc-CCeecccccCEEEEeCCCCccCCcCCceEEEEeCCHHHHHHHHHHHhcCcccc-------cccc
Confidence 999999999877532 322233 68999998 5998642245888876 777665543211110000 1100
Q ss_pred -CCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCCCHHHH
Q 015729 245 -TFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEI 322 (401)
Q Consensus 245 -~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 322 (401)
..+.++.+...++++.++++.+ +...++..++.+++.+.|+++ |+++...... ....++.+.++ ..+..++
T Consensus 251 ~~g~~~~~~~~~~a~~~~~l~~~-----~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~-~~~~~~~~~~~-~~~~~~l 323 (399)
T 2oga_A 251 TKGTNSRLDEMQAAVLRIRLAHL-----DSWNGRRSALAAEYLSGLAGLPGIGLPVTAPD-TDPVWHLFTVR-TERRDEL 323 (399)
T ss_dssp SCCCBCCCCHHHHHHHHHHHHTH-----HHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTT-EECCCSSEEEE-CSSHHHH
T ss_pred ccccCCCcCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHhccCCCccccCCCCC-CcceeEEEEEE-CCCHHHH
Confidence 0012245565555555555533 446667778888899999886 7766432111 11111112331 2367889
Q ss_pred HHHHHhhCCeEEccCCCCC-----------------------CCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 323 VRRAWQRYNLSLGLGLNKV-----------------------AGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 323 ~~~L~~~~~i~v~~g~~~~-----------------------~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.+.|.++ ||.+++++... ..+.+||++...++++|+++++++|+++++++
T Consensus 324 ~~~L~~~-gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~l 396 (399)
T 2oga_A 324 RSHLDAR-GIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWAERV 396 (399)
T ss_dssp HHHHHHT-TBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHC-CCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 9999876 99988764210 02579999988899999999999999998764
No 137
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.96 E-value=6.7e-28 Score=232.08 Aligned_cols=316 Identities=13% Similarity=0.099 Sum_probs=217.9
Q ss_pred cCChHHHHHHHccCcC------CCCCccHHHHHHHHHHHHHHHh----cCCCCceEEecCChhHHHHHHHhccCCCCCeE
Q 015729 18 VHIPDQVIRAMNRNNE------DYRSPAVPALTKTLLEDIKKIF----KTTSGTPFLIPTTGTGAWESALTNTLSPGDRI 87 (401)
Q Consensus 18 ~~~~~~v~~a~~~~~~------~~~~~~~~~~~~~l~~~la~~~----g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~v 87 (401)
.+.++.|++++.+... ....+.......++++.+++++ +.++ +++++++|+++++.. +.+++++||+|
T Consensus 68 ~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~~~~~-~~i~~t~G~~~al~~-l~~l~~~gd~V 145 (432)
T 3ei9_A 68 EPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGD-DDVFVSDGAKCDISR-LQVMFGSNVTI 145 (432)
T ss_dssp SCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTTTTCCG-GGEEEESCHHHHHHH-HHHHHCTTCCE
T ss_pred CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHccCCCCc-ceEEECCChHHHHHH-HHHHcCCCCEE
Confidence 3566777777665322 1112322334567888888886 5554 459999999999987 46778999999
Q ss_pred EEEcCCcchHHHHHHHHHcC------------CcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc
Q 015729 88 ISFLIGQFSLLWIDQQQRLN------------FNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN 155 (401)
Q Consensus 88 l~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~ 155 (401)
++..++|+++. ..++..| .+++.++++.++.++++ +++ . ++++++++++|+||||.+.+
T Consensus 146 l~~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~--~----~~~~~v~l~~p~NPtG~~~~ 216 (432)
T 3ei9_A 146 AVQDPSYPAYV--DSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPD-LST--V----GRTDIIFFCSPNNPTGAAAT 216 (432)
T ss_dssp EEEESCCTHHH--HHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCC-GGG--C----CCCSEEEEESSCTTTCCCCC
T ss_pred EEeCCCCHHHH--HHHHHcCCcccccccccccCceEEeccCcccCCcCC-hhh--C----CCCCEEEEeCCCCCCCCCCC
Confidence 99999988875 3334444 36788888754333222 221 1 46799999999999999986
Q ss_pred ---hHHHHHHhhhcCCCcEEEEecccccCcce---ecc---C-cccceEEEecCCCccc-CCCcceEEEecHHH------
Q 015729 156 ---LSKVRKLLDEYRHPALFLVDGVSSICAID---FRM---D-EWGIDVALTGSQKALS-LPTGMGIVCASPKA------ 218 (401)
Q Consensus 156 ---l~~i~~l~~~~~~~~~li~D~a~~~~~~~---~~~---~-~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~------ 218 (401)
+++|.++|++ +|++||+|++|+.+... ..+ . ..+.++++.|.+|+++ ++.++|+++++++.
T Consensus 217 ~~~l~~l~~la~~--~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~ 294 (432)
T 3ei9_A 217 REQLTQLVEFAKK--NGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGF 294 (432)
T ss_dssp HHHHHHHHHHHHH--HTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSC
T ss_pred HHHHHHHHHHHHH--cCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchH
Confidence 5567777999 99999999999854221 111 1 1356799999999995 34457999998875
Q ss_pred --HHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCcc
Q 015729 219 --LEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKN 296 (401)
Q Consensus 219 --~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~ 296 (401)
.+.+.. ..... .++++...+.++.+++.......+++.++++.++++++.+.|+++|+++
T Consensus 295 ~~~~~~~~----------------~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 356 (432)
T 3ei9_A 295 PVAKDFNR----------------IICTC--FNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYDV 356 (432)
T ss_dssp BHHHHHHH----------------HHHHS--CCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHH----------------Hhccc--cCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 222211 11111 2235555555555555322223467788999999999999999988877
Q ss_pred ccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 297 CTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
..+. ...++++.++ +.+..++...|.+++||.+.+|..+ ...+++||++.. +++++++++++|++.-+
T Consensus 357 ~~~~----~~~~~~~~~~-~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~--~~e~l~~~l~rl~~~~~ 426 (432)
T 3ei9_A 357 YGGK----NAPYVWVHFP-NQSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFG--HRENILEACRRFKQLYK 426 (432)
T ss_dssp EECS----SSSEEEEECT-TSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHT
T ss_pred cCCC----cceEEEEECC-CCCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHhh
Confidence 6532 2357888886 5677888888887679999988543 235789998744 99999999999987654
No 138
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.96 E-value=7.3e-28 Score=226.79 Aligned_cols=325 Identities=13% Similarity=0.054 Sum_probs=229.0
Q ss_pred ccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc-CCCCCeEEEEc
Q 015729 13 FVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPGDRIISFL 91 (401)
Q Consensus 13 ~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~-~~~gd~vl~~~ 91 (401)
++.++.++++++.+++.+...... +.......++++.+++++|.+ .+++++|||+|++.++.++ +++||+|+++.
T Consensus 7 ~~~~~~~~~~~v~~a~~~~~~~~~-~~~~~~~~~l~~~la~~~~~~---~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~ 82 (367)
T 3nyt_A 7 LKNQQARIKDKIDAGIQRVLRHGQ-YILGPEVTELEDRLADFVGAK---YCISCANGTDALQIVQMALGVGPGDEVITPG 82 (367)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCC-CSSCHHHHHHHHHHHHHHTCS---EEEEESCHHHHHHHHHHHTTCCTTCEEEEES
T ss_pred ccccccccCHHHHHHHHHHHhcCC-ccCChHHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHhCCCCcCEEEECC
Confidence 444566778888888877543222 223466889999999999986 3899999999999999888 89999999999
Q ss_pred CCcchHHHHHHHHHcCCcEEEEeCCCC-CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCc
Q 015729 92 IGQFSLLWIDQQQRLNFNVDVVESDWG-EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPA 170 (401)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~ 170 (401)
++|++.. ..++..|++++.++.+++ +.+|+++++++++ +++++|+ ++|++|...++++|.++|++ +|+
T Consensus 83 ~~~~~~~--~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~----~~~~~v~---~~~~~G~~~~~~~i~~la~~--~~~ 151 (367)
T 3nyt_A 83 FTYVATA--ETVALLGAKPVYVDIDPRTYNLDPQLLEAAIT----PRTKAII---PVSLYGQCADFDAINAIASK--YGI 151 (367)
T ss_dssp SSCTHHH--HHHHHTTCEEEEECBCTTTCSBCGGGTGGGCC----TTEEEEC---CBCGGGCCCCHHHHHHHHHH--TTC
T ss_pred CccHHHH--HHHHHcCCEEEEEecCCccCCcCHHHHHHhcC----cCCcEEE---eeCCccChhhHHHHHHHHHH--cCC
Confidence 9888765 446778999999999876 6889999999886 3567777 67899999999999999999 999
Q ss_pred EEEEecccccCcceeccCcccc--eEEEec--CCCcccCCCcceEEEec-HHHHHHhccCCCCccccchHHHHHHhhc-C
Q 015729 171 LFLVDGVSSICAIDFRMDEWGI--DVALTG--SQKALSLPTGMGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNL-G 244 (401)
Q Consensus 171 ~li~D~a~~~~~~~~~~~~~~~--di~~~s--~~K~l~g~~g~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g 244 (401)
++|+|++|+.|.. ++....+. |++++| ++|++++....|+++.+ +++.+++.......... .+.. .
T Consensus 152 ~li~D~a~~~g~~-~~~~~~~~~~di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~~~g~~~-------~~~~~~ 223 (367)
T 3nyt_A 152 PVIEDAAQSFGAS-YKGKRSCNLSTVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIARHGQDR-------RYHHIR 223 (367)
T ss_dssp CBEEECTTTTTCE-ETTEETTSSSSEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEEE-------TTEECS
T ss_pred EEEEECccccCCe-ECCeeccCCCCEEEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHHhcCCCc-------Cceeec
Confidence 9999999997754 23222233 888888 58999652225777774 66666554322111000 0000 0
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCc-cCCceeEEEEcCCCCCHHHHH
Q 015729 245 TFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEE-WFSDTVTAVIVPSHINSSEIV 323 (401)
Q Consensus 245 ~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~ 323 (401)
..+....+....+.....++ .+++..++.+++.+++.+.|.++++.+...... ...+..+.+.++ +.+++.
T Consensus 224 ~g~~~~~~~~~aa~~~~~l~-----~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~ 295 (367)
T 3nyt_A 224 VGVNSRLDTLQAAILLPKLE-----IFEEEIALRQKVAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVRMD---NRESVQ 295 (367)
T ss_dssp CCCBCCCCHHHHHHHHHHHH-----THHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTEECCCSSEEEECS---SHHHHH
T ss_pred cCcCCCccHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhccCCeeccCCCCCCceeeEEEEEEeC---CHHHHH
Confidence 00123344433333333332 356677888889999999999887655432211 223344555553 578899
Q ss_pred HHHHhhCCeEEccCCC-CC------C-------------CcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 324 RRAWQRYNLSLGLGLN-KV------A-------------GKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 324 ~~L~~~~~i~v~~g~~-~~------~-------------~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
+.|.++ ||.++.++. +. . ...+|++++..+|++|++++++.|+++
T Consensus 296 ~~L~~~-GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 296 ASLKAA-GVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp HHHHHH-TCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred HHHHHC-CCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 999877 998887653 10 0 235999999999999999999999765
No 139
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.96 E-value=1.4e-27 Score=225.44 Aligned_cols=298 Identities=16% Similarity=0.179 Sum_probs=212.9
Q ss_pred ChHHHHHHHccCcC----CCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc---cC---CCC-CeEE
Q 015729 20 IPDQVIRAMNRNNE----DYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN---TL---SPG-DRII 88 (401)
Q Consensus 20 ~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~---~~---~~g-d~vl 88 (401)
.++.+.+++.+... ....+ ......++++.+++++|.+ +++++++|+++|+..++.. +. ++| |+|+
T Consensus 45 ~~~~v~~a~~~~~~~~~~~~~~y-~~~~~~~l~~~la~~~g~~--~~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~vl 121 (375)
T 2eh6_A 45 AYPKLTEALKEQVEKLLHVSNLY-ENPWQEELAHKLVKHFWTE--GKVFFANSGTESVEAAIKLARKYWRDKGKNKWKFI 121 (375)
T ss_dssp SCHHHHHHHHHHHHHCSCCCTTB-CCHHHHHHHHHHHHTSSSC--EEEEEESSHHHHHHHHHHHHHHHHHHTTCCCCEEE
T ss_pred CCHHHHHHHHHHHHhccccCccc-CCHHHHHHHHHHHhhcCCC--CeEEEeCchHHHHHHHHHHHHHHhccCCCCCCEEE
Confidence 56777777766431 11122 2345779999999999983 5699999999999998854 34 778 9999
Q ss_pred EEcCCcchHHHHHHHHHcC-------Cc-----EEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc-
Q 015729 89 SFLIGQFSLLWIDQQQRLN-------FN-----VDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN- 155 (401)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g-------~~-----~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~- 155 (401)
+++++|++..... ....+ .. +..++. .|+++++++++ ++++++++++++||||.+.+
T Consensus 122 ~~~~~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~----~~~~~v~~~~~~~~tG~~~~~ 191 (375)
T 2eh6_A 122 SFENSFHGRTYGS-LSATGQPKFHKGFEPLVPGFSYAKL-----NDIDSVYKLLD----EETAGIIIEVIQGEGGVNEAS 191 (375)
T ss_dssp EEBTCCCCSSHHH-HHHCBCGGGTTTTCSCCSSEEEECT-----TCHHHHHTTCC----TTEEEEEECSEETTTTSEECC
T ss_pred EECCCcCCCchhh-hhhcCCccccCCCCCCCCCceeCCC-----chHHHHHHHhc----CCeEEEEEeCccCCCCCcCCC
Confidence 9999877754211 12111 11 333332 38999998886 36799999999999999987
Q ss_pred ---hHHHHHHhhhcCCCcEEEEecccc-cCcce--eccCccc--ceEEEecCCCcccCCCcceEEEecHHHHHHhccCCC
Q 015729 156 ---LSKVRKLLDEYRHPALFLVDGVSS-ICAID--FRMDEWG--IDVALTGSQKALSLPTGMGIVCASPKALEASKTAKS 227 (401)
Q Consensus 156 ---l~~i~~l~~~~~~~~~li~D~a~~-~~~~~--~~~~~~~--~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~ 227 (401)
+++|.++|++ +|+++|+|++|+ ++... ++....+ +|++++| |+++++.++|++++++++.+.+.....
T Consensus 192 ~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~s~S--K~~~~g~~~G~~~~~~~~~~~~~~~~~ 267 (375)
T 2eh6_A 192 EDFLSKLQEICKE--KDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVIALA--KGLGGGVPIGAILAREEVAQSFTPGSH 267 (375)
T ss_dssp HHHHHHHHHHHHH--HTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTSCCEEEEEEHHHHTTCCTTSC
T ss_pred HHHHHHHHHHHHH--hCCEEEEeccccCCCCCCcchhhhhcCCCCCEEEEc--ccccCCCCeEEEEEcHHHHhhhcCCCC
Confidence 9999999999 999999999998 44322 2333444 7888666 999877789999999987776654211
Q ss_pred CccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCce
Q 015729 228 VRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDT 307 (401)
Q Consensus 228 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 307 (401)
+. .++.+...++++.++++... +..++.+++++++.+.|++++..... ..+.
T Consensus 268 ----------------~~--~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~l~~~L~~~~~~~~~-----~~g~ 319 (375)
T 2eh6_A 268 ----------------GS--TFGGNPLACRAGTVVVDEVE-----KLLPHVREVGNYFKEKLKELGKGKVK-----GRGL 319 (375)
T ss_dssp ----------------CC--SSTTCHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHTTSSEEE-----EETT
T ss_pred ----------------CC--CCCCCHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCce-----EEEE
Confidence 11 11234544455556665443 57788888999999999887543222 1235
Q ss_pred eEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 308 VTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 308 ~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
++++.+++ +..++.+.|.++ ||.+.++ .++++||++....+++|+++++++|+++
T Consensus 320 ~~~~~~~~--~~~~~~~~l~~~-gi~~~~~----~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 320 MLGLELER--ECKDYVLKALEK-GLLINCT----AGKVLRFLPPLIIQKEHIDRAISVLREI 374 (375)
T ss_dssp EEEEECSS--CCHHHHHHHHHT-TEECEEE----TTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEEcC--cHHHHHHHHHHC-CCEEecC----CCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 77788854 467888999865 9998865 2568999987778999999999999875
No 140
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.96 E-value=1.9e-28 Score=234.68 Aligned_cols=296 Identities=10% Similarity=0.022 Sum_probs=200.0
Q ss_pred HHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHhccCCCCC-----eEEEE-cCCcchHHHHH-HH-H--Hc
Q 015729 42 ALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTLSPGD-----RIISF-LIGQFSLLWID-QQ-Q--RL 106 (401)
Q Consensus 42 ~~~~~l~~~la~~~----g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd-----~vl~~-~~~~~~~~~~~-~~-~--~~ 106 (401)
....++++.+++++ |.. .++++++|+|+++|++.++.+++++|| +|+++ .++|+++.... .. . ..
T Consensus 75 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~ 154 (417)
T 3g7q_A 75 QGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSA 154 (417)
T ss_dssp TSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEEC
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccc
Confidence 34567777777776 322 335599999999999999999999987 88887 78776654111 01 1 12
Q ss_pred CCcEEEEeCCC-CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCCCcEEEEecccccCc
Q 015729 107 NFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDGVSSICA 182 (401)
Q Consensus 107 g~~~~~v~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~li~D~a~~~~~ 182 (401)
+..+..++.+. ++.+|+++++ ++ ++++++++++++||||.+++ +++|.++|++ +|+++|+|++|+.+.
T Consensus 155 ~~~~~~~~~~~~~~~~d~~~l~--~~----~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~--~~~~li~De~~~~~~ 226 (417)
T 3g7q_A 155 RPNIELLPEGQFKYHVDFEHLH--IG----EETGMICVSRPTNPTGNVITDEELMKLDRLANQ--HNIPLVIDNAYGVPF 226 (417)
T ss_dssp CCEEEEEGGGEEEEECCGGGCC--CC----TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH--TTCCEEEECTTCTTT
T ss_pred cCcccccCCcccccccCHHHhc--cc----cCceEEEECCCCCCCCCccCHHHHHHHHHHHHH--cCCEEEEeCCCcccc
Confidence 23344443321 2357898887 43 46799999999999999998 7888999999 999999999987432
Q ss_pred cee-----ccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHH
Q 015729 183 IDF-----RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLY 257 (401)
Q Consensus 183 ~~~-----~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 257 (401)
... .....+.++++.|.+|+..++.++|+++.++++.+.+.... ... ..+++.....
T Consensus 227 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~~~~~~-------------~~~-----~~~~~~~~~~ 288 (417)
T 3g7q_A 227 PGIIFSEARPLWNPNIILCMSLSKLGLPGSRCGIIIANDKTITAIANMN-------------GII-----SLAPGGMGPA 288 (417)
T ss_dssp TCCBCSCCCCCCCTTEEEEEESGGGTCTTSCCEEEECCHHHHHHHHHHH-------------HHH-----CCCCCSHHHH
T ss_pred ccccccccccCCCCCEEEEEechhccCCCcceEEEEeCHHHHHHHHHhh-------------cce-----eeCCCcHHHH
Confidence 111 11224678999999995443445899999999877665321 000 1123343333
Q ss_pred HHHHHHHHHHHhcH----HH-HHHHHHHHHHHHHHHHHH-c---CCccccCCCccCCceeEEEEcCC-CCCHHHHHHHHH
Q 015729 258 GLRAALDLIFEEGL----EN-VIERHRRLGKATRLAVEA-W---GLKNCTQKEEWFSDTVTAVIVPS-HINSSEIVRRAW 327 (401)
Q Consensus 258 a~~~al~~~~~~g~----~~-~~~~~~~~~~~l~~~L~~-~---g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~ 327 (401)
++.+.++ ...+ .+ .++++.++.+.+.+.|.+ + ++.+..+ ..+.++++.++. +.+..++.+.|.
T Consensus 289 ~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~l~~~l~ 361 (417)
T 3g7q_A 289 MMCEMIK---RNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKP----EGAIFLWLWFKDLPITTELLYQRLK 361 (417)
T ss_dssp HHHHHHH---TTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECC----CBSSEEEEECTTCSSCHHHHHHHHH
T ss_pred HHHHHHc---CcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCC----CcceEEEEEcCCCCCCHHHHHHHHH
Confidence 3333333 2222 22 556677888888888877 3 3554433 244678888876 578889999996
Q ss_pred hhCCeEEccCCCCCC---------CcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 328 QRYNLSLGLGLNKVA---------GKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 328 ~~~~i~v~~g~~~~~---------~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
++ ||.+.+|..+.. .+++||++.. +++++++++++|+++++++
T Consensus 362 ~~-gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~--~~~~i~~~~~~l~~~l~~~ 413 (417)
T 3g7q_A 362 AR-GVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP--EPDKIEAGVKILAEEIERA 413 (417)
T ss_dssp HT-TEECEEGGGGCTTBSSCCGGGGGEEEEESCS--CHHHHHHHHHHHHHHHHHH
T ss_pred HC-CEEEECchhhCCCCccccccCCCeEEEEecC--CHHHHHHHHHHHHHHHHHH
Confidence 55 999998854321 4689998764 9999999999999998753
No 141
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.96 E-value=1.3e-26 Score=222.44 Aligned_cols=333 Identities=13% Similarity=0.093 Sum_probs=222.7
Q ss_pred cccccCCCcCChHHHHHHHccCcCCCC--Cc------cHH----HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHH
Q 015729 10 NHLFVPGPVHIPDQVIRAMNRNNEDYR--SP------AVP----ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESAL 77 (401)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~~~--~~------~~~----~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~ 77 (401)
.+.+.+++.+.++++++++.+...... ++ ... ......++.+++++|.+.. .++++||++|+..++
T Consensus 34 ~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~--~v~~~~Gs~a~~~al 111 (425)
T 3ecd_A 34 QVELIASENIVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFNAGHA--NVQPHSGAQANGAVM 111 (425)
T ss_dssp SEECCTTCCCCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHTCSEE--ECCCSSHHHHHHHHH
T ss_pred ceeeecccCCCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhCCCCc--eeecCchHHHHHHHH
Confidence 456677777779999999998653211 10 000 1233345778899988652 356889999999999
Q ss_pred hccCCCCCeEEEEcCCcchHH-HHHHHHHcCC--cEEEEeCCC-CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccc
Q 015729 78 TNTLSPGDRIISFLIGQFSLL-WIDQQQRLNF--NVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVT 153 (401)
Q Consensus 78 ~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~--~~~~v~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~ 153 (401)
.+++++||+|++..++|++.. ........|. +++.++.+. ++.+|++++++++++ +++++|++++++| |..
T Consensus 112 ~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~---~~~~~v~~~~~~~--~~~ 186 (425)
T 3ecd_A 112 LALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQ---HKPSLIIAGFSAY--PRK 186 (425)
T ss_dssp HHHCCTTCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHH---HCCSEEEEECSCC--CSC
T ss_pred HHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhh---cCCcEEEEccccC--CCc
Confidence 888999999999999887732 2222223344 555666553 367899999999974 2568999987777 567
Q ss_pred cchHHHHHHhhhcCCCcEEEEecccccCcceec--cC-cccceEEEecCCCcccCCCcceEEEec-HHHHHHhccCCCCc
Q 015729 154 NNLSKVRKLLDEYRHPALFLVDGVSSICAIDFR--MD-EWGIDVALTGSQKALSLPTGMGIVCAS-PKALEASKTAKSVR 229 (401)
Q Consensus 154 ~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~--~~-~~~~di~~~s~~K~l~g~~g~G~l~~~-~~~~~~~~~~~~~~ 229 (401)
.++++|.++|++ +|++||+|++|+.+....+ .. ...+|++++|.||+++|+. .|+++.+ +.+.+.+....
T Consensus 187 ~~l~~i~~l~~~--~~~~li~De~~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~-~g~~~~~~~~~~~~~~~~~--- 260 (425)
T 3ecd_A 187 LDFARFRAIADS--VGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPR-GGFVLTNDEEIAKKINSAV--- 260 (425)
T ss_dssp CCHHHHHHHHHH--HTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCCCS-CEEEEESCHHHHHHHHHHH---
T ss_pred CCHHHHHHHHHH--cCCEEEEECcChHhhhhcccccCchhcCcEEEecCCcccCCCC-cEEEEeCCHHHHHHHHhhh---
Confidence 899999999999 9999999999865533111 00 1137899999999996665 5999988 45544443210
Q ss_pred cccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeE
Q 015729 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVT 309 (401)
Q Consensus 230 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~ 309 (401)
..+ +.++++...++++..++......+++...++..++.+++.+.|.+.|+++..+. ....++
T Consensus 261 ------------~~~--~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~ 323 (425)
T 3ecd_A 261 ------------FPG--LQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGVDLVTGG---TDNHLL 323 (425)
T ss_dssp ------------C-------CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGS---CSSSEE
T ss_pred ------------Ccc--ccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCCCeeccCC---CCceEE
Confidence 001 122455656666666666554445778899999999999999999888776532 123467
Q ss_pred EEEcCC-CCCHHHHHHHHHhhCCeEEccCCC------CCCCcEEEEeecc----cCCHHHHHHHHHHHHHHHHhc
Q 015729 310 AVIVPS-HINSSEIVRRAWQRYNLSLGLGLN------KVAGKVFRIGHLG----HLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 310 ~~~~~~-~~~~~~l~~~L~~~~~i~v~~g~~------~~~~~~~Ri~~~~----~~~~~di~~~~~~i~~~l~~~ 373 (401)
++.++. +.+...+.+.|.++ ||.+.++.. ......+|+++.. .++++++++++++|++++++.
T Consensus 324 ~~~~~~~~~~~~~~~~~l~~~-gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 324 LVDLRPKGLKGAQVEQALERA-GITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp EEECGGGTCCHHHHHHHHHHT-TEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCCHHHHHHHHHHc-CCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHhcc
Confidence 777743 45677888888655 999984321 2234579998543 345999999999999999765
No 142
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.96 E-value=7.7e-28 Score=228.95 Aligned_cols=323 Identities=11% Similarity=0.003 Sum_probs=219.6
Q ss_pred CcccccCCCcCChHHHHHHHcc-CcCC--CCCccHHHHHHHHHHHHHHHhcCC-----CCc--eEEecCChhHHHHHHH-
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNR-NNED--YRSPAVPALTKTLLEDIKKIFKTT-----SGT--PFLIPTTGTGAWESAL- 77 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~-~~~~--~~~~~~~~~~~~l~~~la~~~g~~-----~~~--~i~~~~g~t~a~~~~~- 77 (401)
+.|++..++.++++.+++++.+ .... ...+.......++++.++++++.. .++ ++++++|+++|+..++
T Consensus 34 g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~ 113 (397)
T 3fsl_A 34 GLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGAD 113 (397)
T ss_dssp CCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHH
T ss_pred eEEECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCcccccccceEEEEcCCcHHHHHHHHH
Confidence 3344455677777999998887 4332 112222334568888888888652 234 6999999999999984
Q ss_pred -hccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeC--CCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccccc
Q 015729 78 -TNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVES--DWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN 154 (401)
Q Consensus 78 -~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~ 154 (401)
.+++++||+|+++.++|+++. ..++..|++++.++. +.++.+|++++++.+++.. .+++++++++++||||.++
T Consensus 114 ~~~~~~~gd~vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~v~~~~p~nptG~~~ 190 (397)
T 3fsl_A 114 FLKRYFPESGVWVSDPTWENHV--AIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQ-AGSIVLLHPCCHNPTGADL 190 (397)
T ss_dssp HHHHHCTTCCEEEESSCCHHHH--HHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCC-TTCEEEECSSSCTTTCCCC
T ss_pred HHHhcCCCCeEEEeCCCchhHH--HHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCC-CCCEEEEeCCCCCCCCcCC
Confidence 456799999999999887754 567788999999998 4466789999999998532 3568889999999999997
Q ss_pred c---hHHHHHHhhhcCCCcEEEEecccccCcce-----e---cc-CcccceEEEecCCCcccCCCc--ceEEEe---cHH
Q 015729 155 N---LSKVRKLLDEYRHPALFLVDGVSSICAID-----F---RM-DEWGIDVALTGSQKALSLPTG--MGIVCA---SPK 217 (401)
Q Consensus 155 ~---l~~i~~l~~~~~~~~~li~D~a~~~~~~~-----~---~~-~~~~~di~~~s~~K~l~g~~g--~G~l~~---~~~ 217 (401)
+ +++|.++|++ +|+++|+|++|+.+... . .. ...+.++++.|.+|.++ ++| +|++++ +++
T Consensus 191 ~~~~l~~l~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~riG~~~~~~~~~~ 267 (397)
T 3fsl_A 191 TNDQWDAVIEILKA--RELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFS-LYGERVGGLSVMCEDAE 267 (397)
T ss_dssp CHHHHHHHHHHHHH--TTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTT-CGGGCCEEEEEECSSHH
T ss_pred CHHHHHHHHHHHHh--CCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEeccccccc-CcCCCeeEEEEecCCHH
Confidence 6 4588899999 99999999998755432 0 11 12346788999999984 444 688864 455
Q ss_pred HHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHH-----HHhcHHHHHHHHHHHHHHHHHHHHHc
Q 015729 218 ALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLI-----FEEGLENVIERHRRLGKATRLAVEAW 292 (401)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~-----~~~g~~~~~~~~~~~~~~l~~~L~~~ 292 (401)
.++++... .......+ ..+++.....++.+++... ....+++.+++++++++++.+.|++.
T Consensus 268 ~~~~~~~~------------~~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 333 (397)
T 3fsl_A 268 AAGRVLGQ------------LKATVRRN--YSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTE 333 (397)
T ss_dssp HHHHHHHH------------HHHHHHTT--TSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH------------HHHHHHhc--cCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 54433210 01110011 1223433333333333311 12346778889999999999999986
Q ss_pred ----CCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 293 ----GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 293 ----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
|+.+..+ ..+.++++.+ +...+.+.|. ++||.+.+|. ||++. ..+++++++++++|++
T Consensus 334 ~~~~~~~~~~~----~~~~~~~~~~----~~~~~~~~l~-~~gi~v~~g~--------Ris~~-~~~~~~i~~~~~~l~~ 395 (397)
T 3fsl_A 334 MPERNFDYLLN----QRGMFSYTGL----SAAQVDRLRE-EFGVYLIASG--------RMCVA-GLNTANVQRVAKAFAA 395 (397)
T ss_dssp CTTSCCTHHHH----CCSSEEECCC----CHHHHHHHHH-TTCEECCTTC--------EEEGG-GCCTTTHHHHHHHHHH
T ss_pred CCCCCceeecC----CceEEEecCC----CHHHHHHHHH-hCCEEECCCC--------eEEEE-ecCHhhHHHHHHHHHh
Confidence 5665543 2334555444 4555655565 4599998652 88764 4677889999999987
Q ss_pred H
Q 015729 369 I 369 (401)
Q Consensus 369 ~ 369 (401)
+
T Consensus 396 ~ 396 (397)
T 3fsl_A 396 V 396 (397)
T ss_dssp H
T ss_pred h
Confidence 5
No 143
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.96 E-value=2.7e-28 Score=230.13 Aligned_cols=316 Identities=14% Similarity=0.034 Sum_probs=211.4
Q ss_pred cccccC--CCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeE
Q 015729 10 NHLFVP--GPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRI 87 (401)
Q Consensus 10 ~~~~~~--~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~v 87 (401)
.|.+.. ++.++++++++++.. +.. +.....++++.+++++|.++++++++++||++|+..++.++ +||+|
T Consensus 30 v~~~~~~~~~~~~~~~v~~a~~~----~~~--~~~~~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~~--~gd~V 101 (374)
T 2aeu_A 30 LYDLSGLSGGFLIDEKDKALLNT----YIG--SSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL--KPKKV 101 (374)
T ss_dssp CEECSSCCCCCCCCHHHHHHHTS----TTH--HHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH--CCSEE
T ss_pred eeeecccCCCCCCCHHHHHHHHH----hcC--chHHHHHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHhC--CCCEE
Confidence 444443 589999999999972 211 23344677777888899854355899999999999998876 99999
Q ss_pred EEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceE-EEEEecCCCcc-cccchHHHHHHhh
Q 015729 88 ISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKA-ICIVHNETATG-VTNNLSKVRKLLD 164 (401)
Q Consensus 88 l~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~-i~~~~~~n~tG-~~~~l~~i~~l~~ 164 (401)
+++.++|+++. +...++..|++++.+ .|+++++++ + +++++ +++++++|||| ...++++|.++|+
T Consensus 102 l~~~~~y~~~~~~~~~~~~~g~~~~~v-------~d~~~l~~~-~----~~~~~~v~~~~p~nptG~~~~~l~~i~~l~~ 169 (374)
T 2aeu_A 102 IHYLPELPGHPSIERSCKIVNAKYFES-------DKVGEILNK-I----DKDTLVIITGSTMDLKVIELENFKKVINTAK 169 (374)
T ss_dssp EEECSSSSCCTHHHHHHHHTTCEEEEE-------SCHHHHHTT-C----CTTEEEEEECBCTTSCBCCHHHHHHHHHHHH
T ss_pred EEecCCCCccHHHHHHHHHcCcEEEEe-------CCHHHHHhc-C----CCccEEEEEccCCCCCCCCcccHHHHHHHHH
Confidence 99999766543 223677789998888 278998887 3 46799 99999999999 8889999999999
Q ss_pred hcCCCcEEEEecccccCcc-ee-c--cCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHH
Q 015729 165 EYRHPALFLVDGVSSICAI-DF-R--MDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKF 240 (401)
Q Consensus 165 ~~~~~~~li~D~a~~~~~~-~~-~--~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
+ +|+++|+|++|+.+.. +. . ....++|++++|.||+++| .++|++++++++++.+.... .
T Consensus 170 ~--~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g-~~~G~~~~~~~~~~~l~~~~-------------~ 233 (374)
T 2aeu_A 170 N--KEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEG-PRGGLLAGKKELVDKIYIEG-------------T 233 (374)
T ss_dssp H--HTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSS-CSCEEEEEEHHHHHHHHHHH-------------H
T ss_pred H--cCCEEEEECCcccccccccccCCccccCCcEEEecCcccccC-cceEEEEECHHHHHHHHHhh-------------c
Confidence 9 9999999999876531 11 1 1234689999999999865 57899999999877665320 0
Q ss_pred hhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHH----HHHHHH----c----CCccccCCCccCCcee
Q 015729 241 YNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKAT----RLAVEA----W----GLKNCTQKEEWFSDTV 308 (401)
Q Consensus 241 ~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l----~~~L~~----~----g~~~~~~~~~~~~~~~ 308 (401)
.+..+++...++++.++++.+.. +..++..++.+.+ ++.|.+ + |+.+... ..+.+
T Consensus 234 -----~~~~~~~~~~~~a~~~al~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~----~~g~~ 300 (374)
T 2aeu_A 234 -----KFGLEAQPPLLAGIYRALKNFNL----ERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERT----PTGFV 300 (374)
T ss_dssp -----TTTCBCCHHHHHHHHHHHHHCCH----HHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEEC----SSEEE
T ss_pred -----cccCCCCHHHHHHHHHHHHHHhH----HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeC----CceEE
Confidence 11224666666666677665321 1233334444444 344443 1 2333221 12223
Q ss_pred EE-EEcCCCCC---HHHHHHHHHhhCCeEEccCCC-CCCCcEEEEeecc-cCCHHHHHHHHHHHHHHHHhcC
Q 015729 309 TA-VIVPSHIN---SSEIVRRAWQRYNLSLGLGLN-KVAGKVFRIGHLG-HLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 309 ~~-~~~~~~~~---~~~l~~~L~~~~~i~v~~g~~-~~~~~~~Ri~~~~-~~~~~di~~~~~~i~~~l~~~~ 374 (401)
++ ...+...+ ..+++..+.+++||.+.+|.. +..++++||++.. ..+++++++++++++++++++.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~~ 372 (374)
T 2aeu_A 301 IKRVYKDDTINIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAF 372 (374)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHT
T ss_pred EEeecccccccccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 32 22321101 112555555555999998854 2335689998754 3344569999999999988753
No 144
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.96 E-value=3.9e-27 Score=223.80 Aligned_cols=304 Identities=15% Similarity=0.094 Sum_probs=220.1
Q ss_pred ChHHHHHHHccCcCC--CC-CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCC----------CCCe
Q 015729 20 IPDQVIRAMNRNNED--YR-SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLS----------PGDR 86 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~--~~-~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~----------~gd~ 86 (401)
.+|.+.+++.+.... +. .....+...++++.+++++|. +.+++++||++|++.++..+.. .+|+
T Consensus 53 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~---~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~ 129 (392)
T 3ruy_A 53 RHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLTNK---EMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAE 129 (392)
T ss_dssp TCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHHTC---SEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCE
T ss_pred CCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcCC---CEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcE
Confidence 467777777764322 11 112345678999999999983 3499999999999998876443 3679
Q ss_pred EEEEcCCcchHHHHHHHHHcC------------CcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccccc
Q 015729 87 IISFLIGQFSLLWIDQQQRLN------------FNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN 154 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~ 154 (401)
|++..++|++........ .+ .++..++.+ |+++++++++ +++++|++++++||||.+.
T Consensus 130 vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~----~~~~~v~~~~~~nptG~~~ 199 (392)
T 3ruy_A 130 IIVCEDNFHGRTMGAVSM-SSNEEYKRGFGPMLPGIIVIPYG-----DLEALKAAIT----PNTAAFILEPIQGEAGINI 199 (392)
T ss_dssp EEEETTCCCCSSHHHHHT-CSCTTTTTTCCSCCSSEEEECTT-----CHHHHHHHCC----TTEEEEEECSSBSTTTSBC
T ss_pred EEEEcCCcCCCCHhhhhc-cCChhhccccCCCCCCCeeeCcc-----cHHHHHHHhc----cCeEEEEEeCccCCCCCcc
Confidence 999999888765322111 11 124444432 7999999987 4679999999999999999
Q ss_pred c----hHHHHHHhhhcCCCcEEEEecccc-cCc----ceeccCcccceEEEecCCCcccCC-CcceEEEecHHHHHHhcc
Q 015729 155 N----LSKVRKLLDEYRHPALFLVDGVSS-ICA----IDFRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKT 224 (401)
Q Consensus 155 ~----l~~i~~l~~~~~~~~~li~D~a~~-~~~----~~~~~~~~~~di~~~s~~K~l~g~-~g~G~l~~~~~~~~~~~~ 224 (401)
| +++|.++|++ +|+++|+|++|+ ++. ...+.....+|++++| |+++|+ .++|++++++++.+.+..
T Consensus 200 ~~~~~l~~i~~l~~~--~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~S--K~l~gG~~~~G~~~~~~~~~~~~~~ 275 (392)
T 3ruy_A 200 PPAGFLKEALEVCKK--ENVLFVADEIQTGLGRTGKVFACDWDNVTPDMYILG--KALGGGVFPISCAAANRDILGVFEP 275 (392)
T ss_dssp CCTTHHHHHHHHHHT--TTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTTSCCEEEEECHHHHTTCCT
T ss_pred CCHHHHHHHHHHHHH--cCCEEEEeechhCCCccccchhhhccCCCCCEEEEc--hhhhCChhhhEEEEECHHHHhhhcc
Confidence 8 9999999999 999999999996 221 1122223346888775 988764 558999999998776654
Q ss_pred CCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccC
Q 015729 225 AKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWF 304 (401)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 304 (401)
... ...++.+...++++.++++.+.. ++..++++++++++.+.|++++........ .
T Consensus 276 ~~~------------------~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~ 332 (392)
T 3ruy_A 276 GSH------------------GSTFGGNPLACAVSIAALEVLEE---EKLTERSLQLGEKLVGQLKEIDNPMITEVR--G 332 (392)
T ss_dssp TSS------------------CCSSTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHTTCCCTTEEEEE--E
T ss_pred CCc------------------CCCCCCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHhcCCCceEEE--e
Confidence 311 11345777777888888887654 457888899999999999887543322111 1
Q ss_pred CceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 305 SDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 305 ~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
.+.++++.++. +..++.+.|.++ ||.+.++. ++++|+++....+++|+++++++|++++
T Consensus 333 ~g~~~~~~~~~--~~~~l~~~l~~~-gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 333 KGLFIGIELNE--PARPYCEQLKAA-GLLCKETH----ENVIRIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp ETTEEEEEESS--CSHHHHHHHHTT-TEECCCBT----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred eeeEEEEEEcc--hHHHHHHHHHHC-CcEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 23466677754 678899999865 99998663 5789999887889999999999999876
No 145
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.96 E-value=1.3e-27 Score=229.30 Aligned_cols=324 Identities=14% Similarity=0.011 Sum_probs=219.8
Q ss_pred CcccccCCCcCChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHhcCC-----CCc--eEEecCChhHHHHHH--H
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKTT-----SGT--PFLIPTTGTGAWESA--L 77 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g~~-----~~~--~i~~~~g~t~a~~~~--~ 77 (401)
+.|+.-.++++.++.+.+++.+.... ...+.......++++.++++++.. .++ ++++|+|+++|+..+ +
T Consensus 57 G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~ 136 (420)
T 4f4e_A 57 GVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADF 136 (420)
T ss_dssp CSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHH
T ss_pred eeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHH
Confidence 33444445677778899888774322 112333344568888888887552 233 599999999999998 4
Q ss_pred hccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeC--CCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc
Q 015729 78 TNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVES--DWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN 155 (401)
Q Consensus 78 ~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~ 155 (401)
.+++++||+|+++.|+|+++. ..++..|++++.++. +.++.+|++++++.+++.+ ++++++++++++||||.+++
T Consensus 137 ~~~~~~gd~Vlv~~p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~v~i~~p~NPtG~~~~ 213 (420)
T 4f4e_A 137 LRTLNPKAKVAISDPSWENHR--ALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYE-PGTIVVLHACCHNPTGVDLN 213 (420)
T ss_dssp HHHHCTTCCEEEEESCCHHHH--HHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTCC-TTCEEEEECSSCTTTCCCCC
T ss_pred HHHhCCCCEEEEeCCCcHhHH--HHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhCC-CCCEEEEeCCCCCCCCCCCC
Confidence 567899999999999887754 567788999999998 3456789999999997543 36789999999999999986
Q ss_pred ---hHHHHHHhhhcCCCcEEEEecccccCccee-----c---c-CcccceEEEecCCCcccCCCc--ceEEEe---cHHH
Q 015729 156 ---LSKVRKLLDEYRHPALFLVDGVSSICAIDF-----R---M-DEWGIDVALTGSQKALSLPTG--MGIVCA---SPKA 218 (401)
Q Consensus 156 ---l~~i~~l~~~~~~~~~li~D~a~~~~~~~~-----~---~-~~~~~di~~~s~~K~l~g~~g--~G~l~~---~~~~ 218 (401)
+++|.++|++ +|+++|+|++|+...... . . ...+.++++.|.+|.++ ++| +|++++ +++.
T Consensus 214 ~~~l~~i~~~~~~--~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~~~~~~~~~~ 290 (420)
T 4f4e_A 214 DAQWAQVVEVVKA--RRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFS-LYGERVGALSIITDSKDE 290 (420)
T ss_dssp HHHHHHHHHHHHH--HTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTT-CGGGCEEEEEEECSSHHH
T ss_pred HHHHHHHHHHHHH--CCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCc-CcCCCcEEEEEEcCCHHH
Confidence 5578888999 999999999987544211 0 1 12356789999999985 444 788764 4554
Q ss_pred HHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHH--H---HhcHHHHHHHHHHHHHHHHHHHHHc-
Q 015729 219 LEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLI--F---EEGLENVIERHRRLGKATRLAVEAW- 292 (401)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~--~---~~g~~~~~~~~~~~~~~l~~~L~~~- 292 (401)
.+.+... ........ ..+++.....++.+++... . ...+++.+++++++++.+.+.|+++
T Consensus 291 ~~~~~~~------------~~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 356 (420)
T 4f4e_A 291 AARVLSQ------------LKRVIRTN--YSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAG 356 (420)
T ss_dssp HHHHHHH------------HHHHHHTT--TSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHH------------HHHHHhcc--cCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4432210 01111011 1223343333333333321 1 2236778889999999999999986
Q ss_pred ---CCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 293 ---GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 293 ---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
|+.+..+ ..+.++++.+ +.+.+.+.|.++ ||.+.++ .|+++. ..+++++++++++|+++
T Consensus 357 ~~~~~~~~~~----~~g~~~~~~~----~~~~~~~~l~~~-gI~v~~~--------~Ris~~-~~~~~~i~~~~~~l~~~ 418 (420)
T 4f4e_A 357 IERDFSFINA----QRGMFSYSGL----TSAQVDRLREEF-GIYAVST--------GRICVA-ALNTRNLDVVANAIAAV 418 (420)
T ss_dssp CSSCCTHHHH----SCSSEEECCC----CHHHHHHHHHHH-CEECCTT--------SEEEGG-GCCTTTHHHHHHHHHHH
T ss_pred CCCCceeECC----CccEEEEeCC----CHHHHHHHHHhC-CEEecCC--------CeEEEe-cCCHHHHHHHHHHHHHH
Confidence 5555543 2334555444 455666666554 9998764 188764 46888899999999987
Q ss_pred H
Q 015729 370 L 370 (401)
Q Consensus 370 l 370 (401)
+
T Consensus 419 l 419 (420)
T 4f4e_A 419 L 419 (420)
T ss_dssp H
T ss_pred h
Confidence 6
No 146
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.96 E-value=5.8e-27 Score=222.74 Aligned_cols=329 Identities=10% Similarity=0.093 Sum_probs=223.5
Q ss_pred ChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc-CCCCCeEEEEcCCcchHH
Q 015729 20 IPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPGDRIISFLIGQFSLL 98 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~ 98 (401)
+++++++++.+.....+.+.......++++.+++++|.+ .+++++|+++|+..++.++ +++||+|+++.++|+++.
T Consensus 10 ~~~~v~~a~~~~~~~~~~~~~g~~~~~l~~~la~~~~~~---~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~~~~~ 86 (394)
T 1o69_A 10 MGGNELKYIEEVFKSNYIAPLGEFVNRFEQSVKDYSKSE---NALALNSATAALHLALRVAGVKQDDIVLASSFTFIASV 86 (394)
T ss_dssp --CCHHHHHHHHHHHTTTSCTTHHHHHHHHHHHHHHCCS---EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGT
T ss_pred CCHHHHHHHHHHHHcCCccCCChHHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHH
Confidence 444555555553322222222356889999999999873 4999999999999999988 899999999999988875
Q ss_pred HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEeccc
Q 015729 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVS 178 (401)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~ 178 (401)
..++..|++++.++.+.++.+|++++++++++.. .++++|++++ ++|...++++|.++|++ +|+++|+|++|
T Consensus 87 --~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~-~~~~~v~~~~---~~G~~~~l~~i~~l~~~--~~~~li~Dea~ 158 (394)
T 1o69_A 87 --APICYLKAKPVFIDCDETYNIDVDLLKLAIKECE-KKPKALILTH---LYGNAAKMDEIVEICKE--NDIVLIEDAAE 158 (394)
T ss_dssp --HHHHHTTCEEEEECBCTTSSBCHHHHHHHHHHCS-SCCCEEEEEC---GGGCCCCHHHHHHHHHH--TTCEEEEECTT
T ss_pred --HHHHHcCCEEEEEEeCCCCCcCHHHHHHHHhccc-CCceEEEEEC---CCCChhhHHHHHHHHHH--cCCEEEEECcC
Confidence 3456689999999998777899999999997522 2578898885 79999999999999999 99999999999
Q ss_pred ccCcceeccC--c-ccceEEEecCCCcccCCCcceEEEec-HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHH
Q 015729 179 SICAIDFRMD--E-WGIDVALTGSQKALSLPTGMGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQ 254 (401)
Q Consensus 179 ~~~~~~~~~~--~-~~~di~~~s~~K~l~g~~g~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 254 (401)
+.|....+.. . .++|+.++|.+|.++ +.++|+++++ +++.+.+........... ..+ .....| +...+++..
T Consensus 159 ~~g~~~~~~~~~~~~~~~~~s~s~~K~l~-~~~~G~~~~~~~~l~~~l~~~~~~~~~~~-~~~-~~~~~g-~~~~~~~~~ 234 (394)
T 1o69_A 159 ALGSFYKNKALGTFGEFGVYSYNGNKIIT-TSGGGMLIGKNKEKIEKARFYSTQARENC-LHY-EHLDYG-YNYRLSNVL 234 (394)
T ss_dssp CTTCEETTEETTSSSSEEEEECCTTSSSC-CSSCEEEEESCHHHHHHHHHHTBTCCCSS-SSC-CCSSCC-CBCBCCHHH
T ss_pred cccceeCCcccccccCcEEEEEeCCccCC-CCCceEEEECCHHHHHHHHHHHHhccccC-ccc-cccccC-cccCcCHHH
Confidence 9765432211 1 358899999999885 5678999995 787766643211100000 000 000011 011133343
Q ss_pred HHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCc-eeEEEEcCCC-----------------
Q 015729 255 LLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSD-TVTAVIVPSH----------------- 316 (401)
Q Consensus 255 ~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~-~~~~~~~~~~----------------- 316 (401)
.++++. +++ .+++..++.+++++++.+.|.++ +++.........+ .++++.++.+
T Consensus 235 aa~~l~-~l~-----~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 307 (394)
T 1o69_A 235 GAIGVA-QME-----VLEQRVLKKREIYEWYKEFLGEY-FSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKN 307 (394)
T ss_dssp HHHHHH-HHT-----THHHHHHHHHHHHHHHHHHHTTT-EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCC
T ss_pred HHHHHH-HHH-----HHHHHHHHHHHHHHHHHHHhccc-ccccCCCCCCcceeEEEEEEecchhhccccccccccccccc
Confidence 222221 122 35667888899999999999886 5544332111112 1456777532
Q ss_pred ----CCHHHHHHHHHhhCCeEEccCCCC------CC-----C---------cEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 317 ----INSSEIVRRAWQRYNLSLGLGLNK------VA-----G---------KVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 317 ----~~~~~l~~~L~~~~~i~v~~g~~~------~~-----~---------~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
.+..++.+.|.++ ||.++++..+ .. + ..+++.++.++|++|+++++++|+++++
T Consensus 308 ~~~~~~~~~l~~~L~~~-gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~~~ 385 (394)
T 1o69_A 308 ITLHPKISKLIEDLKNK-QIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIK 385 (394)
T ss_dssp CCCCHHHHHHHHHHHHT-TCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred cccccCHHHHHHHHHHc-CCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHHHHHh
Confidence 2567899999765 9999888432 11 1 3466666778999999999999998864
No 147
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.96 E-value=1.5e-27 Score=226.90 Aligned_cols=306 Identities=14% Similarity=0.102 Sum_probs=219.7
Q ss_pred ChHHHHHHHccCcCC--CCC-ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC--CCCCeEEEEcCCc
Q 015729 20 IPDQVIRAMNRNNED--YRS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL--SPGDRIISFLIGQ 94 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~--~~gd~vl~~~~~~ 94 (401)
.++.+.+++.+.... +.. ....+...++++.++++++.+. +++++++|+++|+..++.++. .++|+|++++++|
T Consensus 62 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~v~~~~gg~~a~~~al~~~~~~~~~~~vi~~~~~y 140 (395)
T 1vef_A 62 GNPEVVEAVKRQAETLMAMPQTLPTPMRGEFYRTLTAILPPEL-NRVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGF 140 (395)
T ss_dssp TCHHHHHHHHHHHHHCCCCCTTSCCHHHHHHHHHHHHTSCTTE-EEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCC
T ss_pred CCHHHHHHHHHHHHhCCCCccccCCHHHHHHHHHHHHhcCCCc-CEEEEcCcHHHHHHHHHHHHHHHhCCCeEEEEcCCc
Confidence 667777777664321 111 1135678899999999998643 459999999999999887653 6789999999877
Q ss_pred chHHHHHHHHHcCCc------------EEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc----hHH
Q 015729 95 FSLLWIDQQQRLNFN------------VDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSK 158 (401)
Q Consensus 95 ~~~~~~~~~~~~g~~------------~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~ 158 (401)
++... ......|.+ +..++. .|++++++++++ ++++|++++++|+||.+.+ +++
T Consensus 141 ~~~~~-~~~~~~g~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~i~~----~~~~v~~~~~~~~tG~~~~~~~~l~~ 210 (395)
T 1vef_A 141 SGRTM-GSLSVTWEPKYREPFLPLVEPVEFIPY-----NDVEALKRAVDE----ETAAVILEPVQGEGGVRPATPEFLRA 210 (395)
T ss_dssp CCSSH-HHHHTCCCHHHHGGGCSCSSCEEEECT-----TCHHHHHHHCCT----TEEEEEECSEETTTTSEECCHHHHHH
T ss_pred CCCch-hhhhhcCCcccccccCCCCCCeeEeCC-----CcHHHHHHHhcc----CEEEEEEeCccCCCCccCCCHHHHHH
Confidence 65432 223344554 333332 389999999873 5789998888899999887 999
Q ss_pred HHHHhhhcCCCcEEEEecccc-cCcc----eeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccc
Q 015729 159 VRKLLDEYRHPALFLVDGVSS-ICAI----DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFD 233 (401)
Q Consensus 159 i~~l~~~~~~~~~li~D~a~~-~~~~----~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~ 233 (401)
|.++|++ +|+++|+|++|+ ++.. .++.....+|++ |.+|+++++.++|++++++++.+.+....
T Consensus 211 i~~l~~~--~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~g~~~G~~~~~~~~~~~l~~~~------- 279 (395)
T 1vef_A 211 AREITQE--KGALLILDEIQTGMGRTGKRFAFEHFGIVPDIL--TLAKALGGGVPLGVAVMREEVARSMPKGG------- 279 (395)
T ss_dssp HHHHHHH--HTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGTTSSCEEEEEEHHHHHTSCTTS-------
T ss_pred HHHHHHH--cCCEEEEEecccCCccCCchhHhhhcCCCCCEE--EEcccccCCCceEEEEehHHHHhhhccCC-------
Confidence 9999999 999999999998 3211 112223356877 45899987777899999998777664310
Q ss_pred hHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEc
Q 015729 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIV 313 (401)
Q Consensus 234 ~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 313 (401)
....++.+...++++.++++.+.. +...++..++++++.+.|++++.++....+ ..+.++++.+
T Consensus 280 -----------~~~~~~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~--~~g~~~~~~~ 343 (395)
T 1vef_A 280 -----------HGTTFGGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPSPKIREVR--GMGLMVGLEL 343 (395)
T ss_dssp -----------SCCSSTTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCCTTEEEEE--EETTEEEEEE
T ss_pred -----------cCCCcCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhcCceEEEE--EEEEEEEEEE
Confidence 011334677777778888887654 346778888999999999887543321111 1335778888
Q ss_pred CCCCCHHHHHHHHH-hhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 314 PSHINSSEIVRRAW-QRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 314 ~~~~~~~~l~~~L~-~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
+. +..++.+.|. ++ ||.+.++ .++++||++....+++|+++++++|++++
T Consensus 344 ~~--~~~~l~~~l~~~~-gi~v~~~----~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 344 KE--KAAPYIARLEKEH-RVLALQA----GPTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp SS--CSHHHHHHHHHHH-CEECEES----STTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred cC--hHHHHHHHHHHHC-CeEEecC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 64 3678999998 65 9999875 25789998877789999999999998875
No 148
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.96 E-value=7.4e-27 Score=222.35 Aligned_cols=320 Identities=14% Similarity=0.066 Sum_probs=221.2
Q ss_pred CcccccCCCcCChHHHHHHHccCcC--CC--CCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCC
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNE--DY--RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPG 84 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~--~~--~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~g 84 (401)
..+.+.+.|..+.+++.+++..... .. .+....+...++++.+++++|.+ + .+++++|++|+..++.+++++|
T Consensus 27 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~--~-~i~~~sG~~a~~~~l~~~~~~g 103 (398)
T 2rfv_A 27 LSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERGE--A-GLATASGISAITTTLLTLCQQG 103 (398)
T ss_dssp SSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHTCS--E-EEEESSHHHHHHHHHHHHCCTT
T ss_pred cCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhCCC--c-EEEECCHHHHHHHHHHHHhCCC
Confidence 4455667788888888888762211 11 12224577889999999999986 3 6667778899999998889999
Q ss_pred CeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHH
Q 015729 85 DRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKL 162 (401)
Q Consensus 85 d~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l 162 (401)
|+|+++.+.|++.. +...++..|++++.++.+ |++++++.+++ +++++++++++||||.+.|+++|.++
T Consensus 104 d~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~----~~~~v~~~~~~nptG~~~~l~~i~~l 174 (398)
T 2rfv_A 104 DHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-----KPEEIRAAMRP----ETKVVYIETPANPTLSLVDIETVAGI 174 (398)
T ss_dssp CEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-----SHHHHHHHCCT----TEEEEEEESSBTTTTBCCCHHHHHHH
T ss_pred CEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHhcCC----CCeEEEEECCCCCCCcccCHHHHHHH
Confidence 99999999988765 223347789999999865 89999999873 57999999999999999999999999
Q ss_pred hhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCc--ceEEEecHHHHH-HhccCCCCccccchHHHHH
Q 015729 163 LDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTG--MGIVCASPKALE-ASKTAKSVRVFFDWKDYIK 239 (401)
Q Consensus 163 ~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 239 (401)
|++ +|+++|+|++|+.+..... ...++|+++.|.||+++++.+ .|+++++++.++ .+... ..
T Consensus 175 ~~~--~~~~li~De~~~~~~~~~~-~~~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~------------~~ 239 (398)
T 2rfv_A 175 AHQ--QGALLVVDNTFMSPYCQQP-LQLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVG------------LK 239 (398)
T ss_dssp HHH--TTCEEEEECTTTCTTTCCG-GGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTH------------HH
T ss_pred HHH--cCCEEEEECCCcccccCCc-hhhCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHH------------HH
Confidence 999 9999999999987754322 245789999999999976543 499999998766 33321 01
Q ss_pred HhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcC---------------CccccCCCccC
Q 015729 240 FYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWG---------------LKNCTQKEEWF 304 (401)
Q Consensus 240 ~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g---------------~~~~~~~~~~~ 304 (401)
.+. .++.+...++++.++++. +....++..++.+.+.+.|++.+ +.+..++. ..
T Consensus 240 ~~~-----~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~-~~ 308 (398)
T 2rfv_A 240 DIT-----GGCMSPFNAWLTLRGVKT-----LGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQM-SL 308 (398)
T ss_dssp HTT-----CCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHC-SS
T ss_pred hCC-----CCCCCHHHHHHHHhhhhh-----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhC-CC
Confidence 110 123556555555555543 23345556677777788887642 11111110 12
Q ss_pred CceeEEEEcCCCCCHHHHHHHHHhhC---CeEEccCCCC-----------------------CCCcEEEEeecccCCHHH
Q 015729 305 SDTVTAVIVPSHINSSEIVRRAWQRY---NLSLGLGLNK-----------------------VAGKVFRIGHLGHLNELQ 358 (401)
Q Consensus 305 ~~~~~~~~~~~~~~~~~l~~~L~~~~---~i~v~~g~~~-----------------------~~~~~~Ri~~~~~~~~~d 358 (401)
.+.++++.+++. ..+. ..+.++. ++.+..|... ...+.+||++....++++
T Consensus 309 ~g~~~~~~~~~~--~~~~-~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~ 385 (398)
T 2rfv_A 309 PGGIISFEIAGG--LEAG-RRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDI 385 (398)
T ss_dssp CCSEEEEEETTH--HHHH-HHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHH
T ss_pred CceEEEEEEcCC--HHHH-HHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHH
Confidence 345777888531 1222 2333332 6666666220 115789999988888899
Q ss_pred HHHHHHHHHHH
Q 015729 359 LLGCLAGVEMI 369 (401)
Q Consensus 359 i~~~~~~i~~~ 369 (401)
++.++++|+++
T Consensus 386 i~~l~~al~~~ 396 (398)
T 2rfv_A 386 INDLEHAIRKA 396 (398)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 98888888653
No 149
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.96 E-value=6e-28 Score=232.76 Aligned_cols=287 Identities=11% Similarity=0.032 Sum_probs=218.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeC--CCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVES--DWG 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~ 118 (401)
.....++++.+++ +|.+ +.+++++|+|+|+..++.+++++||+|+++.++|++.. ..+...|++++.++. +.+
T Consensus 56 ~~~~~~~~~~la~-~g~~--~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~--~~~~~~G~~~~~v~~~~~~~ 130 (446)
T 2x3l_A 56 EEVILKSMKQVEK-HSDY--DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVL--HALDISQQEGHFIETHQSPL 130 (446)
T ss_dssp SSHHHHHHHHHCS-CTTE--EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHH--HHHHHHTCCEEECEEEECTT
T ss_pred chHHHHHHHHHHh-cCCC--ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHH--HHHHHcCCeEEEEeCeeccc
Confidence 3567899999999 9986 45899999999999999999999999999999988875 345567999999887 544
Q ss_pred ----CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcc-----eeccCc
Q 015729 119 ----EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAI-----DFRMDE 189 (401)
Q Consensus 119 ----~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~-----~~~~~~ 189 (401)
+.+|++++ +. ++++++++++ +|++|.+.|+++|.++|++ +|+++|+|++|+. .. +.+...
T Consensus 131 ~~~~~~~d~~~l---~~----~~~~~v~~~~-~n~~G~~~~l~~I~~l~~~--~~~~livDea~~~-~~~f~~~~~~~~~ 199 (446)
T 2x3l_A 131 TNHYNKVNLSRL---NN----DGHKLVVLTY-PNYYGETFNVEEVIKSLHQ--LNIPVLIDEAHGA-HFGLQGFPDSTLN 199 (446)
T ss_dssp TSSEEEEEC--------------CCEEEEES-SCTTSCCCCHHHHHHHHHH--TTCCEEEECTTCT-TTTSTTSCCCGGG
T ss_pred cCcCCCCCHHHH---cC----CCceEEEEEC-CCCCeEecCHHHHHHHHHh--cCCeEEEcchhhh-hhccCCCCCChHH
Confidence 45678877 23 3679999998 6679999999999999999 9999999999986 22 344445
Q ss_pred ccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHh
Q 015729 190 WGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE 269 (401)
Q Consensus 190 ~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~ 269 (401)
.++|++++|.||+++++.|+|+++++++.++ ... +......+. .++++...++++.++++.+...
T Consensus 200 ~g~Di~~~S~~K~l~~~~g~g~l~~~~~~i~-~~~---------~~~~~~~~~-----~~s~~~~~~aal~~a~~~l~~~ 264 (446)
T 2x3l_A 200 YQADYVVQSFHKTLPALTMGSVLYIHKNAPY-REN---------IIEYLSYFQ-----TSSPSYLIMASLESAAQFYKTY 264 (446)
T ss_dssp GTCSEEEECHHHHSSSCTTCEEEEEETTCTT-HHH---------HHHHHHHHS-----CSSCCHHHHHHHHHHHHHHHHC
T ss_pred cCCCEEEECCccccccccccEEEEEcCCcCC-HHH---------HHHHHHHHc-----CCCchHHHHHHHHHHHHHHHHh
Confidence 6789999999999888888999999887533 110 011111222 3357787888888888888877
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEc-cCCCCCCCcEEEE
Q 015729 270 GLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLG-LGLNKVAGKVFRI 348 (401)
Q Consensus 270 g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~-~g~~~~~~~~~Ri 348 (401)
+.++..++..++.+++++. |+++..+. .+..+++.++ +.+..++.+.|.++ ||.+. ++ .+++|+
T Consensus 265 g~~~~~~~~~~l~~~l~~~----g~~~~~~~----~~~~l~i~~~-~~~~~~l~~~L~~~-GI~v~~~g-----~~~iRi 329 (446)
T 2x3l_A 265 DSTLFFAKRAQLIECLENK----GFEMLQVD----DPLKLLIKYE-GFTGHDIQNWFMNA-HIYLELAD-----DYQALA 329 (446)
T ss_dssp CCHHHHHHHHHHHHHHHHH----TCEEEECS----STTEEEEECT-TSCHHHHHHHHHHT-TEEESEEC-----SSCEEE
T ss_pred CHHHHHHHHHHHHHHHHHc----CCEECcCC----CCeEEEEEeC-CcCHHHHHHHHHHC-CCEEEecC-----CCEEEE
Confidence 6665777777777777766 77766532 2235777775 67888999999887 99986 33 357999
Q ss_pred eecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 349 GHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 349 ~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
++...+|++|+ +++++|+++++++.
T Consensus 330 ~~~~~~t~e~i-~l~~aL~~~~~~~~ 354 (446)
T 2x3l_A 330 ILPLWHHDDTY-LFDSLLRKIEDMIL 354 (446)
T ss_dssp ECCCCCTTCCC-CHHHHHHHHHTCCC
T ss_pred EeecCCCHHHH-HHHHHHHHHHHhhc
Confidence 98877899999 99999999987653
No 150
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.96 E-value=1.7e-27 Score=227.89 Aligned_cols=323 Identities=11% Similarity=-0.001 Sum_probs=221.1
Q ss_pred CcccccCCCcCChHHHHHHHcc-CcCC--CCCccHHHHHHHHHHHHHHHhcCC-----CCceEEe--cCChhHHHHHHH-
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNR-NNED--YRSPAVPALTKTLLEDIKKIFKTT-----SGTPFLI--PTTGTGAWESAL- 77 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~-~~~~--~~~~~~~~~~~~l~~~la~~~g~~-----~~~~i~~--~~g~t~a~~~~~- 77 (401)
+.|++..++.++++.+.+++.+ .... ...+.......++++.++++++.. .++++++ ++|+++|++.++
T Consensus 37 g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~ 116 (412)
T 1yaa_A 37 GAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAK 116 (412)
T ss_dssp CCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHH
T ss_pred eeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHH
Confidence 3444445555778889998877 4321 112323344678999999888431 2345999 999999999873
Q ss_pred -hccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeC-CC-CCCCChHHHHHHHhccCCCCceEEEEEecCCCccccc
Q 015729 78 -TNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVES-DW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN 154 (401)
Q Consensus 78 -~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~ 154 (401)
.+.+.+||+|+++.++|+++. ..++..|++++.++. ++ ++.+|++++++.+++.+ ...+++++++++||||.++
T Consensus 117 ~~~~~~~gd~Vl~~~p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~~~~p~nPtG~~~ 193 (412)
T 1yaa_A 117 FFSKFFPDKLVYLSKPTWANHM--AIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAP-EGSIFVLHSCAHNPTGLDP 193 (412)
T ss_dssp HHHHHCTTCCEEEEESCCTTHH--HHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSC-TTCEEEEECSSCTTTCCCC
T ss_pred HHHHhCCCCEEEEeCCCCccHH--HHHHHcCceEEEEeeecCCCCccCHHHHHHHHHhCC-CCCEEEEeCCCCCCCCCCC
Confidence 445679999999999888764 556778999999998 43 56789999999997532 1234556699999999998
Q ss_pred c---hHHHHHHhhhcCCCcEEEEecccccCcc--------ee-ccCccc----ceEEEecCCCcccCCCc--ceEEE--e
Q 015729 155 N---LSKVRKLLDEYRHPALFLVDGVSSICAI--------DF-RMDEWG----IDVALTGSQKALSLPTG--MGIVC--A 214 (401)
Q Consensus 155 ~---l~~i~~l~~~~~~~~~li~D~a~~~~~~--------~~-~~~~~~----~di~~~s~~K~l~g~~g--~G~l~--~ 214 (401)
+ +++|.++|++ +|+++|+|++|+.... ++ +....+ .++++.|.+|.++ ++| +|+++ +
T Consensus 194 ~~~~l~~l~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~GlriG~~~~~~ 270 (412)
T 1yaa_A 194 TSEQWVQIVDAIAS--KNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAG-MYGERVGCFHLAL 270 (412)
T ss_dssp CHHHHHHHHHHHHH--TTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSC-CGGGCEEEEEEEC
T ss_pred CHHHHHHHHHHHHH--CCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCC-CcCCcceEEEEEe
Confidence 6 5568888999 9999999999864321 11 222222 4688999999884 555 69988 6
Q ss_pred -----cHH----HHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHH-----HhcHHHHHHHHHH
Q 015729 215 -----SPK----ALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIF-----EEGLENVIERHRR 280 (401)
Q Consensus 215 -----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~-----~~g~~~~~~~~~~ 280 (401)
+++ +.+.+... .. .. ..+++...+.++.++++... ..++++.++++++
T Consensus 271 ~~~~~~~~~~~~l~~~l~~~---------------~~-~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~ 332 (412)
T 1yaa_A 271 TKQAQNKTIKPAVTSQLAKI---------------IR-SE--VSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITK 332 (412)
T ss_dssp CSCTTHHHHHHHHHHHHHHH---------------HH-TT--TSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHH---------------Hh-hc--cCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 555 43333210 00 11 22345655566666665432 2346788899999
Q ss_pred HHHHHHHHHHHcC----CccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCH
Q 015729 281 LGKATRLAVEAWG----LKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNE 356 (401)
Q Consensus 281 ~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~ 356 (401)
+++++.+.|++++ +++..+ ..+.++++.+ +...+ ..+++++||.+.+ ++||++.. .++
T Consensus 333 ~~~~l~~~L~~~~~~~~~~~~~~----~~~~~~~~~~----~~~~~-~~~l~~~gi~v~~--------~~Ris~~~-~~~ 394 (412)
T 1yaa_A 333 MRHALRDHLVKLGTPGNWDHIVN----QCGMFSFTGL----TPQMV-KRLEETHAVYLVA--------SGRASIAG-LNQ 394 (412)
T ss_dssp HHHHHHHHHHHHTCSSCCTHHHH----CCSSEEECCC----CHHHH-HHHHHHHCEECCT--------TSEEEGGG-CCT
T ss_pred HHHHHHHHHHhhCCCCCeeeecc----CceEEEeeCC----CHHHH-HHHHHhCCEEecc--------CcEEEEcc-CCH
Confidence 9999999999875 666543 2334444333 45566 4444445999874 46998764 699
Q ss_pred HHHHHHHHHHHHHHHhc
Q 015729 357 LQLLGCLAGVEMILKDV 373 (401)
Q Consensus 357 ~di~~~~~~i~~~l~~~ 373 (401)
+++++++++|+++++.+
T Consensus 395 ~~i~~~~~~l~~~~~~~ 411 (412)
T 1yaa_A 395 GNVEYVAKAIDEVVRFY 411 (412)
T ss_dssp TTHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHhh
Confidence 99999999999988753
No 151
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.96 E-value=1.5e-26 Score=224.15 Aligned_cols=336 Identities=14% Similarity=0.081 Sum_probs=224.8
Q ss_pred CCCcccccC---CCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCC
Q 015729 7 PGKNHLFVP---GPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSP 83 (401)
Q Consensus 7 ~~~~~~~~~---~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~ 83 (401)
.+..|++.. +|.++++++++++..... .+.......++++.++++++.+ .+++++||++|+..++.+++++
T Consensus 40 ~~~~ylD~~~~~~~~~~~~~~~~a~~~~~~---~y~~~~~~~~l~~~la~~~~~~---~~~~~~~gt~a~~~al~~l~~~ 113 (456)
T 2ez2_A 40 SKDIYIDLLTDSGTNAMSDKQWAGMMMGDE---AYAGSENFYHLERTVQELFGFK---HIVPTHQGRGAENLLSQLAIKP 113 (456)
T ss_dssp GGGCSEECSCSSSCCCCCHHHHHHHTTCCC---CSSSCHHHHHHHHHHHHHHCCS---EEEEESSHHHHHHHHHHHHCCT
T ss_pred cccceeeeccccCCccCCHHHHHHhhcchh---hcccChhHHHHHHHHHHHhCCC---cEEEeCCcHHHHHHHHHHhCCC
Confidence 345566653 455778999999985321 2333566789999999999875 3899999999999999888999
Q ss_pred CCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCC----------CCCCChHHHHHHHhccCCCCceEEEEEecCC-Cccc
Q 015729 84 GDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDW----------GEGAKLDVLASKLAADTAHTIKAICIVHNET-ATGV 152 (401)
Q Consensus 84 gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~----------~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n-~tG~ 152 (401)
|| +++.++|++.. ...++..|++++.++++. ++.+|++++++++++.+..+++++++++++| |||.
T Consensus 114 gd--i~~~~~~~~~~-~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~ 190 (456)
T 2ez2_A 114 GQ--YVAGNMYFTTT-RYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQ 190 (456)
T ss_dssp TC--EEEESSCCHHH-HHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSB
T ss_pred CC--Eeccccccchh-HHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCc
Confidence 99 77788775543 245677899999998763 2568999999999764322358899998988 9999
Q ss_pred ccc---hHHHHHHhhhcCCCcEEEEecccccCc--------ceeccC---------cccceEEEecCCCcccCCCcceEE
Q 015729 153 TNN---LSKVRKLLDEYRHPALFLVDGVSSICA--------IDFRMD---------EWGIDVALTGSQKALSLPTGMGIV 212 (401)
Q Consensus 153 ~~~---l~~i~~l~~~~~~~~~li~D~a~~~~~--------~~~~~~---------~~~~di~~~s~~K~l~g~~g~G~l 212 (401)
+.+ +++|.++|++ +|+++|+|++|+.|. ..++.. ....|++++|++|+++ .+..|++
T Consensus 191 ~~~~~~l~~i~~la~~--~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~-~~~gG~~ 267 (456)
T 2ez2_A 191 PVSMANMRAVRELTEA--HGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCL-VNIGGFL 267 (456)
T ss_dssp CCCHHHHHHHHHHHHH--TTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTC-CSSCEEE
T ss_pred cCCHHHHHHHHHHHHH--cCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEEeCcccCC-CCceeEE
Confidence 887 8999999999 999999999998641 111101 1235888888889764 3335899
Q ss_pred Ee-cHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q 015729 213 CA-SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEA 291 (401)
Q Consensus 213 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~ 291 (401)
+. ++++.+.+.... .... +.....+.+...+.++ ++....... +...++..++.+++.+.|++
T Consensus 268 ~~~~~~~~~~~~~~~------------~~~~-~~~~~~~~~~~~~~a~--a~~~~~~~~-~~~~~~~~~~~~~l~~~L~~ 331 (456)
T 2ez2_A 268 CMNDDEMFSSAKELV------------VVYE-GMPSYGGLAGRDMEAM--AIGLREAMQ-YEYIEHRVKQVRYLGDKLKA 331 (456)
T ss_dssp EESCHHHHHHHHHHH------------HHHT-CCTTTTTCCHHHHHHH--HHHHHHHTC-HHHHHHHHHHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHH------------hhcc-CcccccCcchhHHHHH--HHHHHHHhH-HHHHHHHHHHHHHHHHHHhc
Confidence 88 577766554210 0000 1000111222222221 222222111 45667777888889999988
Q ss_pred cCCccccCCCccCCceeEEEEcC---CCCCHHHH-----HHHHHhhCCeEEcc-CCC------------CCCCcEEEEee
Q 015729 292 WGLKNCTQKEEWFSDTVTAVIVP---SHINSSEI-----VRRAWQRYNLSLGL-GLN------------KVAGKVFRIGH 350 (401)
Q Consensus 292 ~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l-----~~~L~~~~~i~v~~-g~~------------~~~~~~~Ri~~ 350 (401)
.|+++..+. .+.++++.++ .+.+..++ ++.|.++.||.+.+ +.. ....+++||++
T Consensus 332 ~g~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~ 407 (456)
T 2ez2_A 332 AGVPIVEPV----GGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTI 407 (456)
T ss_dssp TTCCBCSSC----CSSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEEC
T ss_pred CCCccccCC----CceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEe
Confidence 777765432 2345666652 23444455 77774444987543 321 11136799988
Q ss_pred ccc-CCHHHHHHHHHHHHHHHHhcC
Q 015729 351 LGH-LNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 351 ~~~-~~~~di~~~~~~i~~~l~~~~ 374 (401)
... ++++|+++++++|++++++..
T Consensus 408 ~~~~~t~e~i~~~~~~l~~~l~~~~ 432 (456)
T 2ez2_A 408 PRRVYTYAHMDVVADGIIKLYQHKE 432 (456)
T ss_dssp CTTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred CCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 765 799999999999999987643
No 152
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.96 E-value=2.6e-27 Score=226.54 Aligned_cols=318 Identities=12% Similarity=-0.013 Sum_probs=219.0
Q ss_pred cCChHHHHHHHccCc--C-CCCCccHHHHHHHHHHHHHHHhcCC-----CCceEEe--cCChhHHHHHHH--hccCCCC-
Q 015729 18 VHIPDQVIRAMNRNN--E-DYRSPAVPALTKTLLEDIKKIFKTT-----SGTPFLI--PTTGTGAWESAL--TNTLSPG- 84 (401)
Q Consensus 18 ~~~~~~v~~a~~~~~--~-~~~~~~~~~~~~~l~~~la~~~g~~-----~~~~i~~--~~g~t~a~~~~~--~~~~~~g- 84 (401)
.++++.+.+++.+.. . ....+.......++++.++++++.. .++++++ ++|+++|++.++ .+++.+|
T Consensus 47 ~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~ 126 (412)
T 1ajs_A 47 PWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGT 126 (412)
T ss_dssp CCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSS
T ss_pred ccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCc
Confidence 456688888887643 1 1122323344678999999999432 2345999 999999999885 3456789
Q ss_pred ----CeEEEEcCCcchHHHHHHHHHcCCc-EEEEeCC--CCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc--
Q 015729 85 ----DRIISFLIGQFSLLWIDQQQRLNFN-VDVVESD--WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN-- 155 (401)
Q Consensus 85 ----d~vl~~~~~~~~~~~~~~~~~~g~~-~~~v~~~--~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~-- 155 (401)
|+|+++.++|+++. ..++..|++ ++.++.+ .++.+|++++++.+++.. .+++++++++++||||.+++
T Consensus 127 ~~~~d~Vl~~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~v~~~~p~nptG~~~~~~ 203 (412)
T 1ajs_A 127 NNKDTPVYVSSPTWENHN--GVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAP-EFSIFVLHACAHNPTGTDPTPE 203 (412)
T ss_dssp SCCCSCEEEEESCCTHHH--HHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSC-TTCEEEEESSSCTTTCCCCCHH
T ss_pred CCCCCeEEEcCCCcHHHH--HHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhCC-CCcEEEEECCCCCCCCCCCCHH
Confidence 99999999988754 557778999 9999984 456789999999997532 25678888999999999976
Q ss_pred -hHHHHHHhhhcCCCcEEEEecccccCcc--------eec-cC-cccceEEEecCCCcccCCCc--ceEEEe---cHHHH
Q 015729 156 -LSKVRKLLDEYRHPALFLVDGVSSICAI--------DFR-MD-EWGIDVALTGSQKALSLPTG--MGIVCA---SPKAL 219 (401)
Q Consensus 156 -l~~i~~l~~~~~~~~~li~D~a~~~~~~--------~~~-~~-~~~~di~~~s~~K~l~g~~g--~G~l~~---~~~~~ 219 (401)
+++|.++|++ +|+++|+|++|..... ++. .. ....++++.|.+|.++ ++| +|++++ +++..
T Consensus 204 ~l~~l~~~~~~--~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~riG~~~~~~~~~~~~ 280 (412)
T 1ajs_A 204 QWKQIASVMKR--RFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFG-LYNERVGNLTVVAKEPDSI 280 (412)
T ss_dssp HHHHHHHHHHH--HTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSC-CGGGCEEEEEEECSSHHHH
T ss_pred HHHHHHHHHHH--CCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccC-CCCcceEEEEEecCCHHHH
Confidence 5578999999 9999999999764322 111 11 1234588999999885 555 699998 88754
Q ss_pred HHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHH-----HhcHHHHHHHHHHHHHHHHHHHHHcC-
Q 015729 220 EASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIF-----EEGLENVIERHRRLGKATRLAVEAWG- 293 (401)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~-----~~g~~~~~~~~~~~~~~l~~~L~~~g- 293 (401)
+.+... .......+ ..+++...++++.++++... ..++++.+++++++++++.+.|++++
T Consensus 281 ~~~~~~------------~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 346 (412)
T 1ajs_A 281 LRVLSQ------------MQKIVRVT--WSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKT 346 (412)
T ss_dssp HHHHHH------------HHHHHHTT--TSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHH------------HHHHHhcc--cCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 433210 01111111 22245555566666666432 23467888899999999999999876
Q ss_pred ---CccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 294 ---LKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 294 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
+.+..+ ..+.++++.+ +...+ ..+.+++||.+.++ +||++.. .+++++++++++|++++
T Consensus 347 ~~~~~~~~~----~~~~~~~~~~----~~~~~-~~~l~~~gv~v~~~--------~Ris~~~-~~~~~i~~~~~~l~~~l 408 (412)
T 1ajs_A 347 PGTWNHITD----QIGMFSFTGL----NPKQV-EYLINQKHIYLLPS--------GRINMCG-LTTKNLDYVATSIHEAV 408 (412)
T ss_dssp SSCCHHHHH----CCSSEEECCC----CHHHH-HHHHHTTCEECCTT--------SEEEGGG-CCTTTHHHHHHHHHHHH
T ss_pred CCCeeEEcC----CCceEEEeCC----CHHHH-HHHHHhCCEEecCC--------cEEEeee-CCHHHHHHHHHHHHHHH
Confidence 555432 2334554443 34344 44444559998753 5997663 58999999999999998
Q ss_pred Hhc
Q 015729 371 KDV 373 (401)
Q Consensus 371 ~~~ 373 (401)
+++
T Consensus 409 ~~~ 411 (412)
T 1ajs_A 409 TKI 411 (412)
T ss_dssp HHC
T ss_pred Hhc
Confidence 764
No 153
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.96 E-value=2.4e-26 Score=219.77 Aligned_cols=323 Identities=13% Similarity=0.040 Sum_probs=214.3
Q ss_pred CChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH
Q 015729 19 HIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL 98 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~ 98 (401)
+.++.+.+++.......++....+...++++.+++++|.+ .+++++||++|+..++.+++++||+|+++.++|++..
T Consensus 33 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~---~~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~ 109 (412)
T 2cb1_A 33 KTLEEGQERFATGEGYVYARQKDPTAKALEERLKALEGAL---EAVVLASGQAATFAALLALLRPGDEVVAAKGLFGQTI 109 (412)
T ss_dssp SSHHHHHHHHHHCCSCSBTTTCCHHHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHHTTCCTTCEEEEETTCCHHHH
T ss_pred CChHHHHHHhccccCcCcCCCCChHHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchhHH
Confidence 3445555555422111122223366889999999999976 3899999999999999998999999999999887754
Q ss_pred --HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEec
Q 015729 99 --WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDG 176 (401)
Q Consensus 99 --~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~ 176 (401)
+...++..|++++.++.+ ++++++++++ ++++|++++++||+|.+.|+++|.++|++ +|+++|+|+
T Consensus 110 ~~~~~~~~~~g~~~~~~~~~------~~~l~~~i~~----~~~~v~~~~~~n~~G~~~~l~~i~~l~~~--~~~~li~D~ 177 (412)
T 2cb1_A 110 GLFGQVLSLMGVTVRYVDPE------PEAVREALSA----KTRAVFVETVANPALLVPDLEALATLAEE--AGVALVVDN 177 (412)
T ss_dssp HHHHHTTTTTTCEEEEECSS------HHHHHHHCCT----TEEEEEEESSCTTTCCCCCHHHHHHHHHH--HTCEEEEEC
T ss_pred HHHHHHHHHcCCEEEEECCC------HHHHHHHhcc----CCeEEEEeCCCCCCcccccHHHHHHHHHH--cCCEEEEEC
Confidence 222356679999988753 8999998874 67999999999999999999999999999 999999999
Q ss_pred ccccCcceeccCcccceEEEecCCCcccCCCc-ceEEEecH-HHH----HHhccCCCCcc-----c--cchHHHHHHhh-
Q 015729 177 VSSICAIDFRMDEWGIDVALTGSQKALSLPTG-MGIVCASP-KAL----EASKTAKSVRV-----F--FDWKDYIKFYN- 242 (401)
Q Consensus 177 a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g-~G~l~~~~-~~~----~~~~~~~~~~~-----~--~~~~~~~~~~~- 242 (401)
+|+.+.........++|++++|.||+++++.+ +|++++.+ +.. ..+........ + .++....+...
T Consensus 178 ~~~~~~~~~~~~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~ 257 (412)
T 2cb1_A 178 TFGAAGALCRPLAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGL 257 (412)
T ss_dssp GGGTTTTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHT
T ss_pred CCccccccCCccccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHH
Confidence 99877322333345799999999999976654 66666544 320 00100000000 0 01111111111
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccc-cCCCc------------cCCcee
Q 015729 243 LGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNC-TQKEE------------WFSDTV 308 (401)
Q Consensus 243 ~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~------------~~~~~~ 308 (401)
... ....+....+.....++ .++...++..++.+++.+.|.+. ++... .+... ...+.+
T Consensus 258 ~~~--g~~~~~~~a~~~~~~l~-----~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~i 330 (412)
T 2cb1_A 258 SLC--GMALSPFNAYLLFQGLE-----TVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPI 330 (412)
T ss_dssp TTT--CCCCCHHHHHHHHHHGG-----GHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSE
T ss_pred Hhc--CCCCChHHhHHHHcCCc-----hHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceE
Confidence 111 11233332222222322 24556666778999999999886 77643 22110 124557
Q ss_pred EEEEcCCCCCHHHHHHHHHhhCCeEEccCC---------CCC-----------------CCcEEEEeecccCCHHHHHHH
Q 015729 309 TAVIVPSHINSSEIVRRAWQRYNLSLGLGL---------NKV-----------------AGKVFRIGHLGHLNELQLLGC 362 (401)
Q Consensus 309 ~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~---------~~~-----------------~~~~~Ri~~~~~~~~~di~~~ 362 (401)
+.|.+ . +.+++.+.|. +.||.+ .+. .+. ..+.+|+|+..++++++++.+
T Consensus 331 v~~~~-~--~~~~~~~~l~-~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l 405 (412)
T 2cb1_A 331 LTLDL-G--DLERASRFLG-AIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALF 405 (412)
T ss_dssp EEEEC-S--SHHHHHHHHH-HCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHH
T ss_pred EEEEe-C--CHHHHHHHHH-hCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHH
Confidence 88888 3 6667777675 458888 552 220 146899999988899999999
Q ss_pred HHHHHH
Q 015729 363 LAGVEM 368 (401)
Q Consensus 363 ~~~i~~ 368 (401)
+++|++
T Consensus 406 ~~al~~ 411 (412)
T 2cb1_A 406 EEALEA 411 (412)
T ss_dssp HHHHHC
T ss_pred HHHHhh
Confidence 988864
No 154
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.96 E-value=4.5e-27 Score=225.70 Aligned_cols=327 Identities=12% Similarity=0.039 Sum_probs=223.3
Q ss_pred CcCChHHHHHHHccCcCCCCCccH-HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcc
Q 015729 17 PVHIPDQVIRAMNRNNEDYRSPAV-PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQF 95 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~~~~~-~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~ 95 (401)
+.+.++.+++++.+...... +.. .....++++.+++++|.+ .+++++|+++|+..++.++. +||+|+++.++|+
T Consensus 27 ~~~~p~~~~~a~~~~~~~~~-y~~~~~~~~~l~~~la~~~~~~---~v~~~~ggt~al~~~l~~l~-~gd~Vlv~~~~~~ 101 (424)
T 2po3_A 27 NRIDRARLYERLDRALDSQW-LSNGGPLVREFEERVAGLAGVR---HAVATCNATAGLQLLAHAAG-LTGEVIMPSMTFA 101 (424)
T ss_dssp CCCCHHHHHHHHHHHHHHTC-CSSSCHHHHHHHHHHHHHHTSS---EEEEESCHHHHHHHHHHHHT-CCSEEEEESSSCT
T ss_pred CCCChHHHHHHHHHHHhcCC-cccCCHHHHHHHHHHHHHhCCC---eEEEeCCHHHHHHHHHHHcC-CCCEEEECCCccH
Confidence 34456778887776442211 222 467889999999999874 49999999999999988764 7899999999988
Q ss_pred hHHHHHHHHHcCCcEEEEeCCC-CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEE
Q 015729 96 SLLWIDQQQRLNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLV 174 (401)
Q Consensus 96 ~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~ 174 (401)
++. ..++..|++++.++.++ ++.+|++++++.+++ ++++|++++ |+|...++++|.++|++ +|+++|+
T Consensus 102 ~~~--~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~----~~~~v~~~~---~tG~~~~l~~i~~la~~--~~~~li~ 170 (424)
T 2po3_A 102 ATP--HALRWIGLTPVFADIDPDTGNLDPDQVAAAVTP----RTSAVVGVH---LWGRPCAADQLRKVADE--HGLRLYF 170 (424)
T ss_dssp HHH--HHHHHTTCEEEEECBCTTTSSBCHHHHGGGCCT----TEEEEEEEC---GGGCCCCHHHHHHHHHH--TTCEEEE
T ss_pred HHH--HHHHHcCCEEEEEecCCCcCCcCHHHHHHhhCc----CCcEEEEEC---CCCCcCCHHHHHHHHHH--cCCEEEE
Confidence 765 45677899999999886 567899999988863 568888764 79999999999999999 9999999
Q ss_pred ecccccCcceeccCcc--cceEEEecCC--CcccCCCcceEEEec-HHHHHHhccCCCCccccchHHHHHHhhcCCCCCC
Q 015729 175 DGVSSICAIDFRMDEW--GIDVALTGSQ--KALSLPTGMGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPY 249 (401)
Q Consensus 175 D~a~~~~~~~~~~~~~--~~di~~~s~~--K~l~g~~g~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 249 (401)
|++|+.|.. ++.... ..|++++|.+ |++++ .++|+++.+ +++.+++...........+ .....|. ..
T Consensus 171 Dea~~~g~~-~~~~~~~~~~di~~~S~sk~K~l~~-~~~G~~v~~~~~l~~~l~~~~~~~~~~~~----~~~~~g~--~~ 242 (424)
T 2po3_A 171 DAAHALGCA-VDGRPAGSLGDAEVFSFHATKAVNA-FEGGAVVTDDADLAARIRALHNFGFDLPG----GSPAGGT--NA 242 (424)
T ss_dssp ECTTCTTCE-ETTEETTSSSSEEEEECCTTSSSCC-SSCEEEEESCHHHHHHHHHHHBTTTTCTT----CCTTCCC--BC
T ss_pred ECccccCCe-ECCeecccccCEEEEeCCCCCCccC-CCCeEEEeCCHHHHHHHHHHHhcCccccc----cccccCc--CC
Confidence 999996543 221111 1477777766 98865 456999998 7776665432110000000 0000010 11
Q ss_pred CCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCcccc-CCCccCCceeEEEEcCC---CCCHHHHHH
Q 015729 250 TPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCT-QKEEWFSDTVTAVIVPS---HINSSEIVR 324 (401)
Q Consensus 250 ~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~l~~ 324 (401)
..+.. ++..++. ...+++...++..++.+++.+.|.++ |+.+.. +......+.++.+.+++ +.+..++.+
T Consensus 243 ~~~~~---~aa~~l~--~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 317 (424)
T 2po3_A 243 KMSEA---AAAMGLT--SLDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEATTGIHRDLVME 317 (424)
T ss_dssp CCCHH---HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHHHHSSCHHHHHH
T ss_pred CcCHH---HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEECCccchhhHHHHHH
Confidence 12222 1122222 12235667788888888888888876 776654 22111223456577754 567888999
Q ss_pred HHHhhCCeEEccCCCCC-------C--------------CcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 325 RAWQRYNLSLGLGLNKV-------A--------------GKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 325 ~L~~~~~i~v~~g~~~~-------~--------------~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.|.++ ||.+.+.+.+. . ...+|++++..++++|+++++++|+++++..
T Consensus 318 ~L~~~-gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~~~ 386 (424)
T 2po3_A 318 VLKAE-GVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLCATRG 386 (424)
T ss_dssp HHHHT-TEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHC-CCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHHHhhh
Confidence 88765 99998743310 0 1128888788899999999999999988654
No 155
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.96 E-value=4.8e-27 Score=229.82 Aligned_cols=302 Identities=11% Similarity=0.005 Sum_probs=210.9
Q ss_pred HHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHhccC-CCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeC
Q 015729 42 ALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTL-SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVES 115 (401)
Q Consensus 42 ~~~~~l~~~la~~~----g~~-~~~~i~~~~g~t~a~~~~~~~~~-~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 115 (401)
....++++.+++++ |.+ .++++++++|+++|+..++.+++ ++||+|+++.|.|+++. ..++..|++++.+++
T Consensus 134 ~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~--~~~~~~g~~~~~~~~ 211 (500)
T 3tcm_A 134 QGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYS--ASIALHGGALVPYYL 211 (500)
T ss_dssp TCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHH--HHHHHTTCEEEEEEC
T ss_pred cChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHH--HHHHHcCCEEEEEec
Confidence 33445666666665 432 33559999999999999998887 79999999999887654 567778999999998
Q ss_pred CCC--CCCChHHHHHHHhccC--CCCceEEEEEecCCCcccccc---hHHHHHHhhhcCCCcEEEEecccccCcce----
Q 015729 116 DWG--EGAKLDVLASKLAADT--AHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDGVSSICAID---- 184 (401)
Q Consensus 116 ~~~--~~~d~~~le~~~~~~~--~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~li~D~a~~~~~~~---- 184 (401)
+++ +.+|+++|++++++.. +.+++++++++++||||.+++ +++|.++|++ +|+++|+|++|..+...
T Consensus 212 ~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~--~~~~li~Deay~~~~~~~~~~ 289 (500)
T 3tcm_A 212 NESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKN--EGLVLLADEVYQENIYVDNKK 289 (500)
T ss_dssp BTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH--HTCEEEEECTTTTCBCCTTCC
T ss_pred ccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHH--cCCEEEEecCccccccCCCCC
Confidence 765 4789999999997521 015789999999999999987 4567777999 99999999998754321
Q ss_pred -ec-------cC--ccc-ceEEEecCCCcccCCC--cceEEEe---cHHHHHHhccCCCCccccchHHHHHHhhcCCCCC
Q 015729 185 -FR-------MD--EWG-IDVALTGSQKALSLPT--GMGIVCA---SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWP 248 (401)
Q Consensus 185 -~~-------~~--~~~-~di~~~s~~K~l~g~~--g~G~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 248 (401)
.+ .. ..+ ..+++.|.||++.|.+ ++|++++ ++++.+.+... .. ..
T Consensus 290 ~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~-------------~~------~~ 350 (500)
T 3tcm_A 290 FHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKI-------------AS------VN 350 (500)
T ss_dssp CCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHH-------------HH------TT
T ss_pred CCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHH-------------Hh------cc
Confidence 11 10 111 2467789999984443 3599987 78877666431 00 02
Q ss_pred CCCcHHHHHHHHHHHH----------HHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEc--CC
Q 015729 249 YTPSIQLLYGLRAALD----------LIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIV--PS 315 (401)
Q Consensus 249 ~~~~~~~~~a~~~al~----------~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~--~~ 315 (401)
.+++....+++..+++ .+.+ ..+..+++++++++.+.+.|+++ |+.+..+. .+.++++.+ |.
T Consensus 351 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~----g~~~~~~~~~lp~ 425 (500)
T 3tcm_A 351 LCSNITGQILASLVMNPPKASDESYASYKA-EKDGILASLARRAKALEHAFNKLEGITCNEAE----GAMYVFPQICLPQ 425 (500)
T ss_dssp CCCCHHHHHHHHHHHSCCCSSSTHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTSTTEECCCCC----BTTEECCEECCCH
T ss_pred cCCCHHHHHHHHHHhcCccccchhHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCcEEecCC----eEEEEeeeecCch
Confidence 2356655566655553 1222 24677888999999999999987 88776543 334555333 21
Q ss_pred ---------CCC-HHHHHHHHHhhCCeEEccCCCCC---CCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 316 ---------HIN-SSEIVRRAWQRYNLSLGLGLNKV---AGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 316 ---------~~~-~~~l~~~L~~~~~i~v~~g~~~~---~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+.. ...++..++++.||.+.+|..+. ...++|+++. .+++++++++++|+++++++
T Consensus 426 ~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~i~~l~~~~~~~ 494 (500)
T 3tcm_A 426 KAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL--PQEDKIPAVISRFTVFHEAF 494 (500)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC--SCTTTHHHHHHHHHHHHHHH
T ss_pred hhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHH
Confidence 111 12234455555599999985532 2357999877 69999999999999988754
No 156
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.95 E-value=2.3e-26 Score=219.12 Aligned_cols=287 Identities=14% Similarity=0.105 Sum_probs=202.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (401)
.....++++.+++++|.+ .+++++||++|+..++.+++++||+|+++.+.|+++. +...++..|++++.++.+
T Consensus 61 ~~~~~~l~~~ia~~~g~~---~~i~~~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-- 135 (404)
T 1e5e_A 61 NPTVSNLEGKIAFLEKTE---ACVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-- 135 (404)
T ss_dssp CHHHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT--
T ss_pred ChHHHHHHHHHHHHhCCC---cEEEeCChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC--
Confidence 456779999999999985 3777888899999999888999999999999888765 222577889999999876
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEec
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s 198 (401)
|++++++++++ +++++++++++||||.+.|+++|.++|++. +|+++|+|++|+.+...... ..+.|+++.|
T Consensus 136 ---d~~~l~~~i~~----~t~~v~l~~p~NptG~v~~l~~i~~la~~~-~~~~li~De~~~~~~~~~~~-~~~~di~~~S 206 (404)
T 1e5e_A 136 ---IPGEVKKHMKP----NTKIVYFETPANPTLKIIDMERVCKDAHSQ-EGVLVIADNTFCSPMITNPV-DFGVDVVVHS 206 (404)
T ss_dssp ---STTHHHHHCCT----TEEEEEEESSCTTTCCCCCHHHHHHHHHTS-TTCEEEEECTTTCTTTCCGG-GGTCSEEEEE
T ss_pred ---CHHHHHHhcCC----CCcEEEEECCCCCCCcccCHHHHHHHHHhh-cCCEEEEECCCchhhhCCcc-ccCCEEEEEc
Confidence 78999998873 679999999999999999999999999973 58999999999977632222 3579999999
Q ss_pred CCCcccCCCc--ceEEEecHHHHH-HhccCCCCccccchHHHHHHhhcCCCC-CCCCcHHHHHHHHHHHHHHHHhcHHHH
Q 015729 199 SQKALSLPTG--MGIVCASPKALE-ASKTAKSVRVFFDWKDYIKFYNLGTFW-PYTPSIQLLYGLRAALDLIFEEGLENV 274 (401)
Q Consensus 199 ~~K~l~g~~g--~G~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~a~~~al~~~~~~g~~~~ 274 (401)
.||+++++.+ .|+++++++.++ .+..... .+ ..+.+....++..++++. ++..
T Consensus 207 ~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~------------------~~~g~~~~~~~~~~~~~~l~~-----~~~~ 263 (404)
T 1e5e_A 207 ATKYINGHTDVVAGLICGKADLLQQIRMVGIK------------------DITGSVISPHDAWLITRGLST-----LNIR 263 (404)
T ss_dssp TTTTTTCSSCCCCEEEEECHHHHHHHHHTCCC------------------CCCCCCCCHHHHHHHHHHHTT-----HHHH
T ss_pred CccccCCCCCCeEEEEEECHHHHHHHHHHHHH------------------hCCCCCCCHHHHHHHHHhHhH-----HHHH
Confidence 9999976544 499999999877 6654321 11 223455444444444432 3445
Q ss_pred HHHHHHHHHHHHHHHHHcC-C--------------ccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccC-C
Q 015729 275 IERHRRLGKATRLAVEAWG-L--------------KNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLG-L 338 (401)
Q Consensus 275 ~~~~~~~~~~l~~~L~~~g-~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g-~ 338 (401)
.++..++.+.+.+.|++.. + ++..++.. ..+.++.+.+++. ..++.+.| ++.+|.+... +
T Consensus 264 ~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~-~~g~~~~~~~~~~--~~~~~~~l-~~~~i~~~~~s~ 339 (404)
T 1e5e_A 264 MKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMR-MYGSMITFILKSG--FEGAKKLL-DNLKLITLAVSL 339 (404)
T ss_dssp HHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCS-SCCSEEEEEETTH--HHHHHHHH-HTCSSSEESSCC
T ss_pred HHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCC-CCceEEEEEeCCC--HHHHHHHH-HhCCCceeccCC
Confidence 6666777777777777642 1 11111001 1244666787431 23444444 4558743321 1
Q ss_pred C-------------------------CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 339 N-------------------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 339 ~-------------------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
. ....+++||++.. ||++.++++|+++++.
T Consensus 340 G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~----e~~~~li~~l~~al~~ 394 (404)
T 1e5e_A 340 GGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI----EDADELIADFKQGLDA 394 (404)
T ss_dssp CSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHHHHH
T ss_pred CCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHHH
Confidence 1 0114789998655 8899999999888764
No 157
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.95 E-value=8.5e-27 Score=224.15 Aligned_cols=322 Identities=15% Similarity=0.097 Sum_probs=221.9
Q ss_pred ChHHHHHHHccCcCC--C--CCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC---C----CCCeEE
Q 015729 20 IPDQVIRAMNRNNED--Y--RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL---S----PGDRII 88 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~--~--~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~---~----~gd~vl 88 (401)
.++++++++.+.... + ......+...++++.++++++.+. +++++++||++|++.++..+. + |||+|+
T Consensus 60 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~v~~~~ggtea~~~ai~~~~~~~~~~g~~~~~vi 138 (429)
T 1s0a_A 60 NHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPL-ECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFL 138 (429)
T ss_dssp SCHHHHHHHHHHHHHCSCCCCSSEECHHHHHHHHHHHHHSCTTC-CEEEEESSHHHHHHHHHHHHHHHHHHHTCCCCEEE
T ss_pred CCHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHhCCCCC-CEEEEeCCHHHHHHHHHHHHHHHhcccCCCCCeEE
Confidence 467788777764321 1 111223456788999999998654 459999999999999886532 2 689999
Q ss_pred EEcCCcchHHHHHHHHHcC-------------CcEEEEeCCC-----C-CCCChHHHHHHHhccCCCCceEEEEEec-CC
Q 015729 89 SFLIGQFSLLWIDQQQRLN-------------FNVDVVESDW-----G-EGAKLDVLASKLAADTAHTIKAICIVHN-ET 148 (401)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g-------------~~~~~v~~~~-----~-~~~d~~~le~~~~~~~~~~~~~i~~~~~-~n 148 (401)
+.+++|++..... ....+ ..++.++.+. . +.+|++++++++++.. +++++++++++ +|
T Consensus 139 ~~~~~yh~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~vi~~p~~~n 216 (429)
T 1s0a_A 139 TFRNGYHGDTFGA-MSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHR-HEIAAVIIEPIVQG 216 (429)
T ss_dssp EETTCCCCSSHHH-HTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHT-TTEEEEEECSSEEC
T ss_pred EECCCCCCCchhh-hhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCC-CCEEEEEEeecccC
Confidence 9999887654211 11111 1355566542 1 2478999999987422 25677777766 79
Q ss_pred Ccccccc----hHHHHHHhhhcCCCcEEEEecccc-cCcc----eeccCcccceEEEecCCCcccCC-CcceEEEecHHH
Q 015729 149 ATGVTNN----LSKVRKLLDEYRHPALFLVDGVSS-ICAI----DFRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKA 218 (401)
Q Consensus 149 ~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~-~~~~----~~~~~~~~~di~~~s~~K~l~g~-~g~G~l~~~~~~ 218 (401)
|+|.+.+ +++|.++|++ +|+++|+|++|+ ++.. .++.....+|++++| |+++++ .++|++++++++
T Consensus 217 ~tG~~~~~~~~l~~i~~l~~~--~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~t~s--K~l~~G~~~iG~~~~~~~~ 292 (429)
T 1s0a_A 217 AGGMRMYHPEWLKRIRKICDR--EGILLIADEIATGFGRTGKLFACEHAEIAPDILCLG--KALTGGTMTLSATLTTREV 292 (429)
T ss_dssp TTTCEEBCTHHHHHHHHHHHH--HTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTSSSCCEEEEECHHH
T ss_pred CCCcccCCHHHHHHHHHHHHH--cCCEEEEeehhhCCcccchHHHhhhcCCCCCEEEec--ccccCCCccceEEEeCHHH
Confidence 9998776 8999999999 999999999997 3321 122223356877655 989876 678999999998
Q ss_pred HHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccc
Q 015729 219 LEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNC 297 (401)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 297 (401)
.+.+....... +. ...+++.+...++++.++++.+.+. ...++..++++++.+.|+++ +++..
T Consensus 293 ~~~l~~~~~~~-----------~~--~~~t~~~n~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~ 356 (429)
T 1s0a_A 293 AETISNGEAGC-----------FM--HGPTFMGNPLACAAANASLAILESG---DWQQQVADIEVQLREQLAPARDAEMV 356 (429)
T ss_dssp HHHHHTSTTSS-----------CS--CCCTTTTCHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHGGGGGCTTE
T ss_pred HHHhhcCCCcc-----------cc--cCCCCCCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 77765421000 00 0113446777778888888876653 46677888899999999875 22221
Q ss_pred cCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 298 TQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.... ..+.++++.+++..+..++.+.|.++ ||.+.+. ++++||++....+++|+++++++|++++++
T Consensus 357 ~~~~--~~g~~~~~~~~~~~~~~~l~~~l~~~-Gi~v~~~-----~~~iRis~~~~~t~e~i~~~~~~l~~~~~~ 423 (429)
T 1s0a_A 357 ADVR--VLGAIGVVETTHPVNMAALQKFFVEQ-GVWIRPF-----GKLIYLMPPYIILPQQLQRLTAAVNRAVQD 423 (429)
T ss_dssp EEEE--EETTEEEEEESSCBCHHHHHHHHHHT-TEECCCB-----TTEEEECCCTTCCHHHHHHHHHHHHHHTSS
T ss_pred EEEE--EeeEEEEEEECCcccHHHHHHHHHHC-CCEEecc-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 1111 12346778886556778899999865 9998763 468999987778999999999999998754
No 158
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.95 E-value=2e-26 Score=221.98 Aligned_cols=309 Identities=18% Similarity=0.137 Sum_probs=221.5
Q ss_pred ChHHHHHHHccCcCC--CCCc-cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC---------CCC-Ce
Q 015729 20 IPDQVIRAMNRNNED--YRSP-AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL---------SPG-DR 86 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~--~~~~-~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~---------~~g-d~ 86 (401)
.+|++++++.+.... +.+. ...+...++++.+++++|. +.+++++||++|++.++.... .+| |+
T Consensus 93 ~~p~v~~Ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~---~~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~ 169 (439)
T 2oat_A 93 CHPKIVNALKSQVDKLTLTSRAFYNNVLGEYEEYITKLFNY---HKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAK 169 (439)
T ss_dssp TCHHHHHHHHHHHTTCSCCCTTSEESSHHHHHHHHHHHHTC---SEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCE
T ss_pred CCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHHhcCC---CEEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCe
Confidence 667888887774432 1111 1234567899999999874 349999999999999886643 356 89
Q ss_pred EEEEcCCcchHHHHHHHHHcC------------CcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccccc
Q 015729 87 IISFLIGQFSLLWIDQQQRLN------------FNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN 154 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~ 154 (401)
|++.+++||+.... .....| .+++.++.+ |+++++++++. +++++|+++++++++|.+.
T Consensus 170 vi~~~~~yhg~~~~-~~~~~g~~~~~~~~~p~~~~v~~~~~~-----d~~~le~~l~~---~~~~~vi~ep~~~~~G~~~ 240 (439)
T 2oat_A 170 IVFAAGNFWGRTLS-AISSSTDPTSYDGFGPFMPGFDIIPYN-----DLPALERALQD---PNVAAFMVEPIQGEAGVVV 240 (439)
T ss_dssp EEEETTCCCCSSHH-HHTTCCCHHHHTTSCSCCTTEEEECSS-----CHHHHHHHTTS---TTEEEEEECSSBTTTTSBC
T ss_pred EEEEcCCCCCCCHh-HhhcCCChhcccCCCCCCCCeEEeCCC-----CHHHHHHHhCC---CCEEEEEEECCCCCCCCcC
Confidence 99999988775422 122223 456666643 89999999952 3578888887778899876
Q ss_pred ----chHHHHHHhhhcCCCcEEEEecccccCcc---e--eccCcccceEEEecCCCcccCC-CcceEEEecHHHHHHhcc
Q 015729 155 ----NLSKVRKLLDEYRHPALFLVDGVSSICAI---D--FRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKT 224 (401)
Q Consensus 155 ----~l~~i~~l~~~~~~~~~li~D~a~~~~~~---~--~~~~~~~~di~~~s~~K~l~g~-~g~G~l~~~~~~~~~~~~ 224 (401)
++++|.++|++ +|+++|+|++|..... . ++.....+|++ |.+|+++++ .++|++++++++.+.+..
T Consensus 241 ~~~~~l~~l~~l~~~--~gillI~DEv~~g~g~~g~~~~~~~~~~~~Di~--t~sK~l~~G~~~~G~v~~~~~~~~~l~~ 316 (439)
T 2oat_A 241 PDPGYLMGVRELCTR--HQVLFIADEIQTGLARTGRWLAVDYENVRPDIV--LLGKALSGGLYPVSAVLCDDDIMLTIKP 316 (439)
T ss_dssp CCTTHHHHHHHHHHH--TTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGTTSSCCEEEEECHHHHTTSCT
T ss_pred CCHHHHHHHHHHHHH--cCCEEEEeccccCCccCCcchhHHHhCCCCcEE--EecccccCCCCCeEEEEECHHHHhccCC
Confidence 69999999999 9999999999962211 1 12223346877 445999765 458999999998776653
Q ss_pred CCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccC
Q 015729 225 AKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWF 304 (401)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 304 (401)
... + ..++.++..+++..++++.+.++ ...++..++.+++++.|+++++++..... .
T Consensus 317 ~~~----------------~--~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~--~ 373 (439)
T 2oat_A 317 GEH----------------G--STYGGNPLGCRVAIAALEVLEEE---NLAENADKLGIILRNELMKLPSDVVTAVR--G 373 (439)
T ss_dssp TSS----------------C--CSSTTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHTTSCTTTEEEEE--E
T ss_pred CCc----------------c--cCCCcCHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHhcCCCcEEEE--e
Confidence 210 1 13345667777888888877654 46778888999999999887655432111 2
Q ss_pred CceeEEEEcCCC--CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 305 SDTVTAVIVPSH--INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 305 ~~~~~~~~~~~~--~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.+.++++.+++. .+..++.+.|.++ ||.+.++ .++++|+++...++++|+++++++|++++++
T Consensus 374 ~g~~~~v~l~~~~~~~~~~l~~~l~~~-Gv~v~~~----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 374 KGLLNAIVIKETKDWDAWKVCLRLRDN-GLLAKPT----HGDIIRFAPPLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp ETTEEEEEECCCSSCCHHHHHHHHHHT-TEECCBS----SSSEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred eeeEEEEEEecCccHHHHHHHHHHHHC-CeEEecC----CCCEEEEECccCCCHHHHHHHHHHHHHHHHh
Confidence 345777888653 4578899999876 9998864 2578999887788999999999999998865
No 159
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.95 E-value=2.7e-27 Score=228.89 Aligned_cols=324 Identities=12% Similarity=0.083 Sum_probs=223.2
Q ss_pred hHHHHHHHccCcC--CCC--CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCC-------CC-CeEE
Q 015729 21 PDQVIRAMNRNNE--DYR--SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLS-------PG-DRII 88 (401)
Q Consensus 21 ~~~v~~a~~~~~~--~~~--~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~-------~g-d~vl 88 (401)
+|++.+++.+... .+. .....+...+++++++++++...+ .+++++||++|++.++..... +| ++|+
T Consensus 93 ~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~L~e~la~~~~~~~~-~v~~~~sGseA~~~Alk~a~~~~~~~g~~g~~~ii 171 (457)
T 3tfu_A 93 HPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDITPAGLD-TVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLM 171 (457)
T ss_dssp CHHHHHHHHHHHHHCSCCCSSSEECHHHHHHHHHHHHHSSTTEE-EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEE
T ss_pred CHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCcC-EEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCceEE
Confidence 4556665555321 121 223456677999999999976543 599999999999998876543 44 5888
Q ss_pred EEcCCcchHHHHHHHH------------HcCCcEEEEeCCCCC--CCChHHHHHHHhccCCCCceEEEEEe-cCCCcccc
Q 015729 89 SFLIGQFSLLWIDQQQ------------RLNFNVDVVESDWGE--GAKLDVLASKLAADTAHTIKAICIVH-NETATGVT 153 (401)
Q Consensus 89 ~~~~~~~~~~~~~~~~------------~~g~~~~~v~~~~~~--~~d~~~le~~~~~~~~~~~~~i~~~~-~~n~tG~~ 153 (401)
+.+++|++........ .....+..++.+... ..|++++++++++.. +++++|+++. ++|++|.+
T Consensus 172 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~-~~~aavi~ep~~~~~~G~~ 250 (457)
T 3tfu_A 172 TWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHA-GELAAVVVEPVVQGAGGMR 250 (457)
T ss_dssp EETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHG-GGEEEEEECSSEECTTTCE
T ss_pred EEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCC-CCEEEEEEeCCCcCCCCcc
Confidence 8888888765322111 111234444443221 137899999997533 3578899998 89999998
Q ss_pred cc----hHHHHHHhhhcCCCcEEEEecccccCcc---e--eccCcccceEEEecCCCcccCC-CcceEEEecHHHHHHhc
Q 015729 154 NN----LSKVRKLLDEYRHPALFLVDGVSSICAI---D--FRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASK 223 (401)
Q Consensus 154 ~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~---~--~~~~~~~~di~~~s~~K~l~g~-~g~G~l~~~~~~~~~~~ 223 (401)
.+ +++|.++|++ +|+++|+|+++..... . ++.....+|++++| |.++|+ .++|++++++++.+.+.
T Consensus 251 ~~~~~~l~~l~~l~~~--~gillI~DEv~~g~gr~G~~~a~~~~~~~pdiit~s--K~l~gG~~~lG~v~~~~~i~~~~~ 326 (457)
T 3tfu_A 251 FHDPRYLHDLRDICRR--YEVLLIFDEIATGFGRTGALFAADHAGVSPDIMCVG--KALTGGYLSLAATLCTADVAHTIS 326 (457)
T ss_dssp ECCTHHHHHHHHHHHH--HTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEEC--GGGGTTSSCCEEEEEEHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHH--cCCEEEEEcCccCCccccchhHhHhcCCCceEEEEC--hhhhCCCcceEEEEEcHHHHHHhh
Confidence 86 8999999999 9999999999873211 1 12223347877554 999776 47899999999988774
Q ss_pred cCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCc
Q 015729 224 TAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEE 302 (401)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 302 (401)
......+ ..+. +++.++..+++..++++.+.++ ...++..++.+++++.|+++ ..+.... .
T Consensus 327 ~~~~~~~-----------~~~~--t~~~n~~a~aaa~aaL~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~v~~--v 388 (457)
T 3tfu_A 327 AGAAGAL-----------MHGP--TFMANPLACAVSVASVELLLGQ---DWRTRITELAAGLTAGLDTARALPAVTD--V 388 (457)
T ss_dssp HSSSCSC-----------CCCC--TTTTCHHHHHHHHHHHHHHHTS---CHHHHHHHHHHHHHHHHGGGGGSTTEEE--E
T ss_pred ccCCCce-----------eEec--CCCcCHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHhcCCCeee--e
Confidence 2111100 0111 3456777778888888877654 36777788888899988876 2322211 1
Q ss_pred cCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 303 WFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
...+.++++.+++..+..++.+.|+++ ||.+++. ++++||++....|++|+++++++|++++++++
T Consensus 389 r~~G~~~~i~l~~~~~~~~~~~~l~~~-Gv~v~~~-----~~~lRi~p~~~~t~eei~~~l~~L~~~l~~~~ 454 (457)
T 3tfu_A 389 RVCGAIGVIECDRPVDLAVATPAALDR-GVWLRPF-----RNLVYAMPPYICTPAEITQITSAMVEVARLVG 454 (457)
T ss_dssp EECSSCEEEEESSCCCHHHHHHHHHHT-TEECCCB-----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC-
T ss_pred ecCCeEEEEEECCcccHHHHHHHHHHC-CeEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 123457778886666788999999887 9998753 46899987777899999999999999998765
No 160
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.95 E-value=9.8e-27 Score=224.81 Aligned_cols=327 Identities=10% Similarity=0.001 Sum_probs=222.9
Q ss_pred CCcccccCCCcCChHHHHHHHccCc----CCCCCccHHHHHHHHHHHHHHHh-cCCC----CceEEe--cCChhHHHHH-
Q 015729 8 GKNHLFVPGPVHIPDQVIRAMNRNN----EDYRSPAVPALTKTLLEDIKKIF-KTTS----GTPFLI--PTTGTGAWES- 75 (401)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~----~~~~~~~~~~~~~~l~~~la~~~-g~~~----~~~i~~--~~g~t~a~~~- 75 (401)
.+.|++.++|.++.+++.+++.+.. .....+.......++++.+++++ |.+. ++++++ |+|+++|+..
T Consensus 56 ~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~g~~~~~~~~~~i~~~~t~ggt~al~l~ 135 (448)
T 3meb_A 56 VGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIG 135 (448)
T ss_dssp SCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHH
T ss_pred cccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHHHHHHHhcCCCccccCcCcEEEEECCcHHHHHHHH
Confidence 3567788888999999999943321 11112323344668999999987 7652 345999 9999999987
Q ss_pred -HHhccCCCCCeEEEEcCCcchHHHHHHHH----HcCCcEEEEeC-CCC--CCCChHHHHHHHhccCCCCceEEEEEecC
Q 015729 76 -ALTNTLSPGDRIISFLIGQFSLLWIDQQQ----RLNFNVDVVES-DWG--EGAKLDVLASKLAADTAHTIKAICIVHNE 147 (401)
Q Consensus 76 -~~~~~~~~gd~vl~~~~~~~~~~~~~~~~----~~g~~~~~v~~-~~~--~~~d~~~le~~~~~~~~~~~~~i~~~~~~ 147 (401)
.+.+++.+||+|++++|+|.++. ..++ ..|++++.++. +.+ +.+|++++++.+++.+ .+++++++++++
T Consensus 136 ~~~~~~~~~gd~Vlv~~p~~~~~~--~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~-~~~~~v~~~~p~ 212 (448)
T 3meb_A 136 FEFLHLWMPKAEFYMPSTTWPNHY--GIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAP-EKSIFLFHACAH 212 (448)
T ss_dssp HHHHHHHCTTCCEEEESSCCTHHH--HHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSC-TTCEEEEESSSC
T ss_pred HHHHHHhCCCCEEEECCCCCHhHH--HHHHhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhCC-CCcEEEEeCCCC
Confidence 44567889999999999887764 4566 78999999998 554 6889999999998532 246788889999
Q ss_pred CCcccccch---HHHHHHhhhcCCCcEEEEecccccCcce-e--c---c----CcccceEEEecCCCcccCCCc--ceEE
Q 015729 148 TATGVTNNL---SKVRKLLDEYRHPALFLVDGVSSICAID-F--R---M----DEWGIDVALTGSQKALSLPTG--MGIV 212 (401)
Q Consensus 148 n~tG~~~~l---~~i~~l~~~~~~~~~li~D~a~~~~~~~-~--~---~----~~~~~di~~~s~~K~l~g~~g--~G~l 212 (401)
||||.+.+. ++|.++|++ +|+++|+|++|...... . + . ......+++.|.||.++ ++| +|++
T Consensus 213 NPtG~~~~~~~l~~i~~l~~~--~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g-~~G~RiG~l 289 (448)
T 3meb_A 213 NPSGIDFTEAQWKELLPIMKE--KKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFG-LYGERIGCL 289 (448)
T ss_dssp TTTCCCCCHHHHHHHHHHHHH--HTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSC-CGGGCCEEE
T ss_pred CCCCcCCCHHHHHHHHHHHHH--CCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccCC-Cccccceee
Confidence 999999875 458999999 99999999998743321 1 0 0 11234577899999884 444 6887
Q ss_pred --Ee--------c-H----HHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHH-----HhcHH
Q 015729 213 --CA--------S-P----KALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIF-----EEGLE 272 (401)
Q Consensus 213 --~~--------~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~-----~~g~~ 272 (401)
++ . + ++.+.+.. ....+ ..+++.....++.+++.... ...++
T Consensus 290 ~~v~~~~~~~~~~~~~~~~~l~~~l~~---------------~~~~~---~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~ 351 (448)
T 3meb_A 290 HVVHAGVEGSVEKNKALSAAMVSGMTL---------------QIRKT---WSMSAIHGAYIVQVIVHDKRLLQMFYDNVK 351 (448)
T ss_dssp EEECCCCSSSHHHHHHHHHHHHHHHHH---------------HHHTT---TSSCCHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred eeeeccccccccCCHHHHHHHHHHHHH---------------HHhcc---cCCccHHHHHHHHHHhcChHHHHHHHHHHH
Confidence 55 3 4 33322221 01111 22355544444444443211 12357
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC---------ccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCC
Q 015729 273 NVIERHRRLGKATRLAVEAWGL---------KNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAG 343 (401)
Q Consensus 273 ~~~~~~~~~~~~l~~~L~~~g~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~ 343 (401)
+.++++.++++++.+.|+++|. ....+ ..+.+.+..+ + .++...|++++||.+.+|.
T Consensus 352 ~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~----~~g~~~~~~~----~-~~~~~~ll~~~gV~v~~G~----- 417 (448)
T 3meb_A 352 EMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILT----AIGMFTFTGL----T-PEHVDYLKEKWSIYLVKAG----- 417 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHH----CCSSEEECCC----C-HHHHHHHHHHHCEEECSGG-----
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCC----CceEEEecCC----C-HHHHHHHHHhCCEEEeCCC-----
Confidence 7888899999999999998743 22222 2333444333 3 3556666556699998764
Q ss_pred cEEEEeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 344 KVFRIGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 344 ~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
.||++. ..+++++++++++|+++++++++
T Consensus 418 --gRis~a-~~~~~~i~~~~~~l~~~l~~~~~ 446 (448)
T 3meb_A 418 --GRMSMC-GLTESNCDYVAEAIHDAVTKLPF 446 (448)
T ss_dssp --GEEEGG-GCCTTTHHHHHHHHHHHHHHSCC
T ss_pred --cEEEEe-cCCHHHHHHHHHHHHHHHHhccc
Confidence 199764 46778899999999999987765
No 161
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.95 E-value=1.6e-27 Score=226.49 Aligned_cols=314 Identities=15% Similarity=0.060 Sum_probs=213.4
Q ss_pred cCChHHHHHHHccCcC--CCCCccHHHHHHHHHHHHHHHh-cCC-CCceEEe--cCChhHHHHHHHhccC--CCCCeEEE
Q 015729 18 VHIPDQVIRAMNRNNE--DYRSPAVPALTKTLLEDIKKIF-KTT-SGTPFLI--PTTGTGAWESALTNTL--SPGDRIIS 89 (401)
Q Consensus 18 ~~~~~~v~~a~~~~~~--~~~~~~~~~~~~~l~~~la~~~-g~~-~~~~i~~--~~g~t~a~~~~~~~~~--~~gd~vl~ 89 (401)
.+.++.+.+++.+... ....+.......++++.+++++ +.. .++++++ ++|+++|++.++..+. .+||+|++
T Consensus 43 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~ 122 (394)
T 2ay1_A 43 TPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFV 122 (394)
T ss_dssp CCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGGGCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEE
T ss_pred ccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCCCCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEE
Confidence 4567888888876421 1112222234568899999887 441 2345888 9999999999886643 49999999
Q ss_pred EcCCcchHHHHHHHHHcCCcEEEEeCC--CCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhh
Q 015729 90 FLIGQFSLLWIDQQQRLNFNVDVVESD--WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLD 164 (401)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~ 164 (401)
+.++|+++. ..++..|++++.++.+ .++.+|++++++.+++.+ .+++++++++++||||.+++ +++|.++|+
T Consensus 123 ~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~ 199 (394)
T 2ay1_A 123 SDPTWPNHV--SIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAK-KGDMVLLHGCCHNPTGANLTLDQWAEIASILE 199 (394)
T ss_dssp EESCCHHHH--HHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTCC-TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHH
T ss_pred cCCCChhHH--HHHHHcCCceEEEecccccCCccCHHHHHHHHHhCC-CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 999888754 4567789999999985 456789999999997532 24577788999999999986 557888999
Q ss_pred hcCCCcEEEEecccccCcc-------eec-cCccc-ceEEEecCCCcccCCCc--ceEEEe---cHHHHHHhccCCCCcc
Q 015729 165 EYRHPALFLVDGVSSICAI-------DFR-MDEWG-IDVALTGSQKALSLPTG--MGIVCA---SPKALEASKTAKSVRV 230 (401)
Q Consensus 165 ~~~~~~~li~D~a~~~~~~-------~~~-~~~~~-~di~~~s~~K~l~g~~g--~G~l~~---~~~~~~~~~~~~~~~~ 230 (401)
+ +|+++|+|++|+.+.. ++. ....+ .++++.|.+|+++ ++| +|++++ +++..+.+...
T Consensus 200 ~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~riG~~~~~~~~~~~~~~l~~~----- 271 (394)
T 2ay1_A 200 K--TGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFG-IYRERTGCLLALCADAATRELAQGA----- 271 (394)
T ss_dssp H--HTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTT-CGGGCEEEEEEECSSHHHHHHHHHH-----
T ss_pred H--CCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCc-CcCCccceEEEEeCCHHHHHHHHHH-----
Confidence 9 9999999999986432 111 22223 3577889999984 444 599998 67654443210
Q ss_pred ccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHH-----HHhcHHHHHHHHHHHHHHHHHHHHHcC----CccccCCC
Q 015729 231 FFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLI-----FEEGLENVIERHRRLGKATRLAVEAWG----LKNCTQKE 301 (401)
Q Consensus 231 ~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~-----~~~g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~ 301 (401)
........ ..+++...++++.++++.. ...++++.+++++++++++.+.|++++ +.+..+
T Consensus 272 -------~~~~~~~~--~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-- 340 (394)
T 2ay1_A 272 -------MAFLNRQT--YSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAE-- 340 (394)
T ss_dssp -------HHHHHHTT--TSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHH--
T ss_pred -------HHHHHhhh--cCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcC--
Confidence 01000011 1223444455555555532 123467788889999999999998864 555432
Q ss_pred ccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 302 EWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
..+.++++.+ +...+.+.|.++ ||.+.++ +||++. .++++|+++++++|+++
T Consensus 341 --~~g~~~~~~~----~~~~~~~~l~~~-gi~v~~~--------~Ris~~-~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 341 --HRGMFSRLGA----TPEQVKRIKEEF-GIYMVGD--------SRINIA-GLNDNTIPILARAIIEV 392 (394)
T ss_dssp --CCSSEEECCC----CHHHHHHHHHHH-CEECCTT--------CEEEGG-GCCTTTHHHHHHHHHHH
T ss_pred --CceEEEeeCC----CHHHHHHHHHhC-CEEecCC--------CeEEee-cCCHhhHHHHHHHHHHc
Confidence 2334555544 345565556555 9998753 599866 47999999999999875
No 162
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.95 E-value=3e-27 Score=224.98 Aligned_cols=308 Identities=15% Similarity=0.112 Sum_probs=218.5
Q ss_pred ChHHHHHHHccCcCC--CCC-ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCC------C-CCeEEE
Q 015729 20 IPDQVIRAMNRNNED--YRS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLS------P-GDRIIS 89 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~------~-gd~vl~ 89 (401)
.++++++++.+.... +.. ....+...++++.+++++|. +++++++||++|+..++.++.. + +++|++
T Consensus 57 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~---~~v~~~~gg~~a~~~al~~~~~~~~~~~~~~~~vi~ 133 (397)
T 2ord_A 57 SHPRLVEAIKDQAEKLIHCSNLFWNRPQMELAELLSKNTFG---GKVFFANTGTEANEAAIKIARKYGKKKSEKKYRILS 133 (397)
T ss_dssp TCHHHHHHHHHHHHHCSCCCTTSEEHHHHHHHHHHHHTTTS---CEEEEESSHHHHHHHHHHHHHHHHHHHCTTCCEEEE
T ss_pred CCHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHhcCC---CeEEEeCCHHHHHHHHHHHHHHHhhcCCCCCceEEE
Confidence 467777777663321 111 12346778999999999974 3499999999999998877542 4 478999
Q ss_pred EcCCcchHHHHHHHHHcCCc------------EEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccc-cc--
Q 015729 90 FLIGQFSLLWIDQQQRLNFN------------VDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGV-TN-- 154 (401)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~~------------~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~-~~-- 154 (401)
+++.|++... ..++..|.+ ++.++.+ |+++++++++ +++++|++++++||||. ++
T Consensus 134 ~~~~yh~~~~-~~~~~~g~~~~~~~~~p~~~~~~~~~~~-----d~~~l~~~l~----~~~~~v~~~~~~nptG~~~~~~ 203 (397)
T 2ord_A 134 AHNSFHGRTL-GSLTATGQPKYQKPFEPLVPGFEYFEFN-----NVEDLRRKMS----EDVCAVFLEPIQGESGIVPATK 203 (397)
T ss_dssp EBTCCCCSSH-HHHHHSBCHHHHGGGCSCCTTEEEECTT-----CHHHHHHHCC----TTEEEEEECSEECTTTCEECCH
T ss_pred EcCCcCCCch-hhhhccCChhhccccCCCCCCeeEecCC-----CHHHHHHHhh----cCeEEEEEecccCCCCcccCCH
Confidence 9888776543 234445654 6666643 8999999987 36799999999999999 44
Q ss_pred -chHHHHHHhhhcCCCcEEEEecccccCcc---eeccCcc--cceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCC
Q 015729 155 -NLSKVRKLLDEYRHPALFLVDGVSSICAI---DFRMDEW--GIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSV 228 (401)
Q Consensus 155 -~l~~i~~l~~~~~~~~~li~D~a~~~~~~---~~~~~~~--~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~ 228 (401)
++++|.++|++ +|+++|+|++|+.... +...... .+|++++ +|+++++.++|++++++++. .+....
T Consensus 204 ~~l~~l~~l~~~--~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~s~--sK~~~~G~r~G~~~~~~~~~-~l~~~~-- 276 (397)
T 2ord_A 204 EFLEEARKLCDE--YDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVLTT--AKGLGGGVPIGAVIVNERAN-VLEPGD-- 276 (397)
T ss_dssp HHHHHHHHHHHH--HTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEE--CGGGGTTSCCEEEEECSTTC-CCCTTS--
T ss_pred HHHHHHHHHHHH--cCCEEEEEecccCCccCccchhhhhhCCCCCeeee--ccccCCCcCeEEEEEchHhc-ccCCCC--
Confidence 58889999999 9999999999972211 1211222 3677755 69998666789999988764 332110
Q ss_pred ccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCc
Q 015729 229 RVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSD 306 (401)
Q Consensus 229 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~ 306 (401)
.+ ..++.+...++++.++++.+.+ ++..++++++++++.+.|+++ +++...... ..+
T Consensus 277 --------------~~--~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--~~g 335 (397)
T 2ord_A 277 --------------HG--TTFGGNPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVR--GMG 335 (397)
T ss_dssp --------------SC--CSSTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEE--EET
T ss_pred --------------cC--CCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEE--EEe
Confidence 01 1334666677777778876544 357788889999999999876 455322111 123
Q ss_pred eeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 307 TVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 307 ~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.++++.+++..+..++.+.|.++ ||.+.++. ++++||++....+++|+++++++|+++++++
T Consensus 336 ~~~~~~~~~~~~~~~l~~~l~~~-gi~v~~~~----~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~ 397 (397)
T 2ord_A 336 LMIGIQFREEVSNREVATKCFEN-KLLVVPAG----NNTIRFLPPLTVEYGEIDLAVETLKKVLQGI 397 (397)
T ss_dssp TEEEEEECTTSCHHHHHHHHHHT-TEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEECChHHHHHHHHHHHHC-CCEEccCC----CCEEEEECCcCCCHHHHHHHHHHHHHHHhhC
Confidence 56778886555688899999875 99998762 5689999776789999999999999988753
No 163
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.95 E-value=8.1e-27 Score=222.25 Aligned_cols=325 Identities=9% Similarity=-0.020 Sum_probs=214.7
Q ss_pred CCcccccCCCcCChHHHHHHHccCcC--CCCCccHHHHHHHHHHHHHHHhcCCC-----CceEEe--cCChhHHHHHHHh
Q 015729 8 GKNHLFVPGPVHIPDQVIRAMNRNNE--DYRSPAVPALTKTLLEDIKKIFKTTS-----GTPFLI--PTTGTGAWESALT 78 (401)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~~--~~~~~~~~~~~~~l~~~la~~~g~~~-----~~~i~~--~~g~t~a~~~~~~ 78 (401)
.+.|++..+|.++.+++.+++.+... ...++.......++++.++++++... ++++++ |+|+++|+..++.
T Consensus 35 ~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~ 114 (401)
T 7aat_A 35 VGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGAN 114 (401)
T ss_dssp CCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHH
T ss_pred eeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCccccccCceEEEecCcchHHHHHHHH
Confidence 35566677778887888887765322 11223223345688888888887541 345766 9999999998775
Q ss_pred cc---CCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCC--CCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccc
Q 015729 79 NT---LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESD--WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVT 153 (401)
Q Consensus 79 ~~---~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~ 153 (401)
.+ +++||+|+++.|+|.++. ..++..|++++.++.+ .++.+|++.+++.+++.+ ++++++++++++||||.+
T Consensus 115 ~l~~~~~~gd~Vlv~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~v~i~~p~NPtG~~ 191 (401)
T 7aat_A 115 FLQRFFKFSRDVYLPKPSWGNHT--PIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIP-EKSIILLHACAHNPTGVD 191 (401)
T ss_dssp HHHHHCTTCCEEEEEESCCTTHH--HHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTSC-TTCEEEEESSSCTTTCCC
T ss_pred HHHHhccCCCEEEEcCCCchhHH--HHHHHcCCeeEeeeeeccccCccCHHHHHHHHHhCC-CCcEEEEeCCCCCCCCCC
Confidence 54 489999999999888764 5677889999999975 356789999988887632 567899999999999988
Q ss_pred cc---hHHHHHHhhhcCCCcEEEEecccccCcce-e-------c--cCcccceEEEecCCCcccCCCc--ceEEEe---c
Q 015729 154 NN---LSKVRKLLDEYRHPALFLVDGVSSICAID-F-------R--MDEWGIDVALTGSQKALSLPTG--MGIVCA---S 215 (401)
Q Consensus 154 ~~---l~~i~~l~~~~~~~~~li~D~a~~~~~~~-~-------~--~~~~~~di~~~s~~K~l~g~~g--~G~l~~---~ 215 (401)
++ +++|.++|++ +|+++|+|++|...... . . .......+++.|.||.++ .+| +|++++ +
T Consensus 192 ~~~~~l~~i~~~~~~--~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~RiG~l~~~~~~ 268 (401)
T 7aat_A 192 PRQEQWKELASVVKK--RNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMG-LYGERAGAFTVICRD 268 (401)
T ss_dssp CCHHHHHHHHHHHHH--TTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSC-CGGGCEEEEEEECSS
T ss_pred CCHHHHHHHHHHHHh--CCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccc-cccCceEEEEEEeCC
Confidence 76 6778889999 99999999998754321 1 0 122345788999999984 555 698876 5
Q ss_pred HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHH--HH---HhcHHHHHHHHHHHHHHHHHHHH
Q 015729 216 PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDL--IF---EEGLENVIERHRRLGKATRLAVE 290 (401)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~--~~---~~g~~~~~~~~~~~~~~l~~~L~ 290 (401)
++..+.+... +....... ..+++......+..++.. +. ...+++.+++++++++++.+.|+
T Consensus 269 ~~~~~~~~~~--------~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~ 334 (401)
T 7aat_A 269 AEEAKRVESQ--------LKILIRPM------YSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLK 334 (401)
T ss_dssp HHHHHHHHHH--------HHHHHHHH------HSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH--------HHHHHHhc------cCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5533222110 00000000 112333322222222211 10 22356778889999999999999
Q ss_pred HcC----CccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHH
Q 015729 291 AWG----LKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGV 366 (401)
Q Consensus 291 ~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i 366 (401)
+++ +.+..+ ..+.++++.+ +.+.+ ..|.+++||.+.++ +||++.. .+++++++++++|
T Consensus 335 ~~~~~~~~~~~~~----~~~~~~~~~~----~~~~~-~~ll~~~gi~v~~~--------~Ris~~~-~~~~~i~~~~~~l 396 (401)
T 7aat_A 335 KEGSSHNWQHITD----QIGMFCFTGL----KPEQV-ERLTKEFSIYMTKD--------GRISVAG-VASSNVGYLAHAI 396 (401)
T ss_dssp HTTCCSCCHHHHH----CCSSEEECCC----CHHHH-HHHHHHHCEECCTT--------CEEEGGG-CCTTTHHHHHHHH
T ss_pred hcCCCCCCceecC----CcceEEecCC----CHHHH-HHHHHhCCEeccCC--------CeEEecc-CChhhHHHHHHHH
Confidence 875 443332 2344554433 44444 55555559998633 5897765 5666699999999
Q ss_pred HHHH
Q 015729 367 EMIL 370 (401)
Q Consensus 367 ~~~l 370 (401)
++++
T Consensus 397 ~~~~ 400 (401)
T 7aat_A 397 HQVT 400 (401)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8875
No 164
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.95 E-value=7.1e-27 Score=222.95 Aligned_cols=307 Identities=12% Similarity=0.066 Sum_probs=218.1
Q ss_pred hHHHHHHHccCcCC--CC-CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCC-------CC-CeEEE
Q 015729 21 PDQVIRAMNRNNED--YR-SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLS-------PG-DRIIS 89 (401)
Q Consensus 21 ~~~v~~a~~~~~~~--~~-~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~-------~g-d~vl~ 89 (401)
++.+.+++.+.... +. .....+...++++.+++++|.+ ++++++||++|++.++..+.. +| |+|++
T Consensus 57 ~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~---~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~ 133 (406)
T 4adb_A 57 HPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFAD---RVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVA 133 (406)
T ss_dssp CHHHHHHHHHHHTTCSCCCTTSCCHHHHHHHHHHHHHSSCS---EEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEE
T ss_pred CHHHHHHHHHHHHhcccccCCcCCHHHHHHHHHHHhhCCCC---eEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEE
Confidence 56677666654322 11 1123456789999999999765 499999999999999877653 55 99999
Q ss_pred EcCCcchHHHHHHHHHcC------------CcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccccc---
Q 015729 90 FLIGQFSLLWIDQQQRLN------------FNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN--- 154 (401)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~--- 154 (401)
.+++|++.... .....+ .++..++.+ |+++++++++ +++++++++ |+||+|.+.
T Consensus 134 ~~~~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~----~~~~~v~~~-p~np~g~~~~~~ 202 (406)
T 4adb_A 134 FKNAFHGRTLF-TVSAGGQPAYSQDFAPLPADIRHAAYN-----DINSASALID----DSTCAVIVE-PIQGEGGVVPAS 202 (406)
T ss_dssp ETTCCCCSSHH-HHHHSSCGGGTGGGCSCCSSEEEECTT-----CHHHHHTTCS----TTEEEEEEC-SEETTTTSEECC
T ss_pred ECCCcCCCcHH-HhhccCCccccccCCCCCCCceEeCCC-----cHHHHHHHhc----CCeEEEEEe-CCcCCCCCccCC
Confidence 99988876522 122222 244444433 7999999886 467899998 889998765
Q ss_pred --chHHHHHHhhhcCCCcEEEEecccccCcc---e--eccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCC
Q 015729 155 --NLSKVRKLLDEYRHPALFLVDGVSSICAI---D--FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKS 227 (401)
Q Consensus 155 --~l~~i~~l~~~~~~~~~li~D~a~~~~~~---~--~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~ 227 (401)
++++|.++|++ +|+++|+|++|+.... + .+.....+|++++ +|+++++.++|++++++++.+.+.....
T Consensus 203 ~~~l~~l~~l~~~--~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~t~--sK~~~~G~r~G~~~~~~~~~~~~~~~~~ 278 (406)
T 4adb_A 203 NAFLQGLRELCNR--HNALLIFDEVQTGVGRTGELYAYMHYGVTPDLLTT--AKALGGGFPVGALLATEECARVMTVGTH 278 (406)
T ss_dssp HHHHHHHHHHHHH--TTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEE--CGGGGTTSCCEEEEECHHHHHTCCTTSS
T ss_pred HHHHHHHHHHHHH--cCCEEEEeccccCCCccchhHHHHhcCCCCCEEEe--chhhcCCCCeEEEEEcHHHHhhhccCCc
Confidence 58899999999 9999999999962211 1 1222334677765 7999755568999999998887764321
Q ss_pred CccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcC--CccccCCCccCC
Q 015729 228 VRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWG--LKNCTQKEEWFS 305 (401)
Q Consensus 228 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g--~~~~~~~~~~~~ 305 (401)
...++.+...++++.++++.+.. ++..++++++++++.+.|++++ +..... ....
T Consensus 279 ------------------~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~--~~~~ 335 (406)
T 4adb_A 279 ------------------GTTYGGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINHRYGLFSE--VRGL 335 (406)
T ss_dssp ------------------CCSSTTCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEE--EEEE
T ss_pred ------------------CCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCceE--EEEE
Confidence 11334666666777777775533 5678888899999999998752 222111 1123
Q ss_pred ceeEEEEcCCCC--CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 306 DTVTAVIVPSHI--NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 306 ~~~~~~~~~~~~--~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+.++++.+++.. +..++.+.|.++ ||.+.++. ++++|+++....+++|+++++++|+++++++
T Consensus 336 g~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~~~----~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~ 400 (406)
T 4adb_A 336 GLLIGCVLNADYAGQAKQISQEAAKA-GVMVLIAG----GNVVRFAPALNVSEEEVTTGLDRFAAACEHF 400 (406)
T ss_dssp TTEEEEEECTTTTTCHHHHHHHHHHT-TEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEeCCcHHHHHHHHHHHHHC-CcEEeecC----CCeEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 457778886532 578999999877 99988753 5789998777889999999999999998765
No 165
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.95 E-value=5.5e-27 Score=226.14 Aligned_cols=323 Identities=16% Similarity=0.086 Sum_probs=215.9
Q ss_pred ChHHHHHHHccCcCC--CC--CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc--CCCCCeEEEEcCC
Q 015729 20 IPDQVIRAMNRNNED--YR--SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIG 93 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~--~~--~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--~~~gd~vl~~~~~ 93 (401)
.++.+++++.+.... +. .....+...++++.++++++...++++++++||++|++.++... +.++++|++.+++
T Consensus 60 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~~vi~~~~~ 139 (439)
T 3dxv_A 60 GHPAIVAAVSAAAANPAGATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVKATGRSGVIAFAGA 139 (439)
T ss_dssp SCHHHHHHHHHHHHSCSCSCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTC
T ss_pred CCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHHHHHHHhCCCEEEEECCC
Confidence 456666666553321 11 22345778899999999986544345999999999999998764 3467889999998
Q ss_pred cchHHHHHHHHHcCCc--------------EEEEeCCCCCCC-----ChHHHHHHHhccCCCCceEEEEEecCCCccccc
Q 015729 94 QFSLLWIDQQQRLNFN--------------VDVVESDWGEGA-----KLDVLASKLAADTAHTIKAICIVHNETATGVTN 154 (401)
Q Consensus 94 ~~~~~~~~~~~~~g~~--------------~~~v~~~~~~~~-----d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~ 154 (401)
||+..... ....+.. +..++.+..... |+++|++++++...+++++++++++++++|.+.
T Consensus 140 yhg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~ 218 (439)
T 3dxv_A 140 YHGCTVGS-MAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIV 218 (439)
T ss_dssp CCCSSHHH-HCC-------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCTTCEEEEEECSSBSTTTSBC
T ss_pred CCCCcHHH-HhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCcc
Confidence 87765321 1111211 122333221111 689999999422115678999999999999998
Q ss_pred c----hHHHHHHhhhcCCCcEEEEecccccCc-----ceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccC
Q 015729 155 N----LSKVRKLLDEYRHPALFLVDGVSSICA-----IDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTA 225 (401)
Q Consensus 155 ~----l~~i~~l~~~~~~~~~li~D~a~~~~~-----~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~ 225 (401)
+ +++|.++|++ +|+++|+|++|+... ...+.....+|+++ .+|+++++.++|++++++++.+.+...
T Consensus 219 ~~~~~l~~l~~l~~~--~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~s--~sK~~~~G~riG~~~~~~~~~~~~~~~ 294 (439)
T 3dxv_A 219 PPDGFLRKFADICRA--HGILVVCDEVKVGLARSGRLHCFEHEGFVPDILV--LGKGLGGGLPLSAVIAPAEILDCASAF 294 (439)
T ss_dssp CCTTHHHHHHHHHHH--TTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEEE--ECGGGGTTSCCEEEEEEHHHHTSCSSS
T ss_pred CCHHHHHHHHHHHHH--cCCEEEEeccccCCCcCchhhHHHhcCCCCCEEE--EcchhcCCcceEEEEECHHHHhhhcCC
Confidence 8 9999999999 999999999997221 11222233467774 459997655689999999987766542
Q ss_pred CCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCcc
Q 015729 226 KSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEW 303 (401)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~ 303 (401)
.. + .++ .++..+++..++++.+.+. ...++.+++.+++++.|.++ .+.......
T Consensus 295 ~~----------------~--~t~-~~~~~~~aa~aal~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-- 350 (439)
T 3dxv_A 295 AM----------------Q--TLH-GNPISAAAGLAVLETIDRD---DLPAMAERKGRLLRDGLSELAKRHPLIGDIR-- 350 (439)
T ss_dssp SC----------------C--TTT-TCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCTTEEEEE--
T ss_pred Cc----------------C--CCc-ccHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE--
Confidence 10 1 133 5666667777778776553 35666677777777777664 122211111
Q ss_pred CCceeEEEEc--------CCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 304 FSDTVTAVIV--------PSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 304 ~~~~~~~~~~--------~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
..+.++++.+ |++.+..++.+.|.++ ||.+.++.. .++++||++....+++|+++++++|+++++++.
T Consensus 351 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~--~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 426 (439)
T 3dxv_A 351 GRGLACGMELVCDRQSREPARAETAKLIYRAYQL-GLVVYYVGM--NGNVLEFTPPLTITETDIHKALDLLDRAFSELS 426 (439)
T ss_dssp EETTEEEEEEEEETTTTEECHHHHHHHHHHHHHH-TEECEEEST--TSCEEEECCCTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred EEEEEEEEEEecCccccCCCHHHHHHHHHHHHHC-CcEEeecCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 1234566665 3323356788888877 999988743 257899988878899999999999999998763
No 166
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.95 E-value=7.9e-26 Score=217.42 Aligned_cols=310 Identities=17% Similarity=0.086 Sum_probs=215.5
Q ss_pred ChHHHHHHHccCcCC--CCC-ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC---------CCC-Ce
Q 015729 20 IPDQVIRAMNRNNED--YRS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL---------SPG-DR 86 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~---------~~g-d~ 86 (401)
.+|.+++++.+.... +.. ....+...++++.+++++|. +.+++++||++|++.++.... .+| |+
T Consensus 82 ~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~---~~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~ 158 (433)
T 1z7d_A 82 CHPNILNAMINQAKNLTICSRAFFSVPLGICERYLTNLLGY---DKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAK 158 (433)
T ss_dssp TCHHHHHHHHHHHTTCSCCCTTSEEHHHHHHHHHHHHHHTC---SEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCE
T ss_pred CCHHHHHHHHHHHHhCCCccCCcCCHHHHHHHHHHHhhcCC---CeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCe
Confidence 667777777764432 111 12345678899999999974 349999999999999886532 467 99
Q ss_pred EEEEcCCcchHHHHHHHHHcC------------CcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccccc
Q 015729 87 IISFLIGQFSLLWIDQQQRLN------------FNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN 154 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~ 154 (401)
|++.+++|++..... ....| .++..++.+ |+++++++++. +++++|+++++++++|.+.
T Consensus 159 vi~~~~~yhg~~~~~-~~~~g~~~~~~~~~p~~~~v~~~~~~-----d~~~le~~l~~---~~~~~vi~ep~~~~~G~~~ 229 (433)
T 1z7d_A 159 IVVCKNNFSGRTLGC-ISASTTKKCTSNFGPFAPQFSKVPYD-----DLEALEEELKD---PNVCAFIVEPIQGEAGVIV 229 (433)
T ss_dssp EEEETTC---------------------------CEEEECTT-----CHHHHHHHHTS---TTEEEEEECSSBSTTTSBC
T ss_pred EEEEeCCcCCcchhh-hcccCCccccccCCCCCCCeEEeCCC-----CHHHHHHHhCC---CCEEEEEEECCCCCCCccC
Confidence 999999887754211 11112 344555542 89999999952 4678888887778899876
Q ss_pred ----chHHHHHHhhhcCCCcEEEEecccccCcc---e--eccCcccceEEEecCCCcccCC-CcceEEEecHHHHHHhcc
Q 015729 155 ----NLSKVRKLLDEYRHPALFLVDGVSSICAI---D--FRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKT 224 (401)
Q Consensus 155 ----~l~~i~~l~~~~~~~~~li~D~a~~~~~~---~--~~~~~~~~di~~~s~~K~l~g~-~g~G~l~~~~~~~~~~~~ 224 (401)
++++|.++|++ +|+++|+|++|+.... . ++.....+|++++ +|+++++ .++|++++++++.+.+..
T Consensus 230 ~~~~~l~~l~~l~~~--~g~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t~--sK~l~~G~~~~G~v~~~~~~~~~l~~ 305 (433)
T 1z7d_A 230 PSDNYLQGVYDICKK--YNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVILL--GKALSGGHYPISAVLANDDIMLVIKP 305 (433)
T ss_dssp CCTTHHHHHHHHHHH--TTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEE--CGGGGTTSSCCEEEEECHHHHTTCCT
T ss_pred CCHHHHHHHHHHHHH--cCCEEEEecCccCCCcCCcchhhHhcCCCCCEEEE--CccccCCCCCeEEEEECHHHHhhhcc
Confidence 68999999999 9999999999973211 1 1222235787754 5999765 468999999998776653
Q ss_pred CCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCc
Q 015729 225 AKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEE 302 (401)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~ 302 (401)
... + ..++.++..+++..++++.+.++ ...++..++.+++++.|+++ +++......
T Consensus 306 ~~~----------------~--~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~- 363 (433)
T 1z7d_A 306 GEH----------------G--STYGGNPLAASICVEALNVLINE---KLCENAEKLGGPFLENLKRELKDSKIVRDVR- 363 (433)
T ss_dssp TCC----------------C--CTTTTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHTTCTTEEEEE-
T ss_pred ccc----------------c--ccCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE-
Confidence 210 1 13346667777888888877654 36777888899999999886 665432111
Q ss_pred cCCceeEEEEcCCC-CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 303 WFSDTVTAVIVPSH-INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 303 ~~~~~~~~~~~~~~-~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
..+.++++.+++. .+..++.+.|.++ ||.+.++ .++++|+++...++++|+++++++|+++++++
T Consensus 364 -~~g~~~~i~~~~~~~~~~~~~~~l~~~-Gv~v~~~----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 429 (433)
T 1z7d_A 364 -GKGLLCAIEFKNELVNVLDICLKLKEN-GLITRDV----HDKTIRLTPPLCITKEQLDECTEIIVKTVKFF 429 (433)
T ss_dssp -EETTEEEEEECTTTCCHHHHHHHHHHT-TEECCEE----TTTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred -eeeeEEEEEEccChhHHHHHHHHHHHC-CeEEecC----CCCEEEEECCcCCCHHHHHHHHHHHHHHHHHH
Confidence 2345777888643 4577899999876 9998865 25789998877789999999999999998765
No 167
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.95 E-value=4.2e-27 Score=223.76 Aligned_cols=314 Identities=11% Similarity=0.001 Sum_probs=212.8
Q ss_pred cCChHHHHHHHccCcC--CCCCccHHHHHHHHHHHHHHHhcCC-----CCceEEe--cCChhHHHHHHHhcc--CCCCCe
Q 015729 18 VHIPDQVIRAMNRNNE--DYRSPAVPALTKTLLEDIKKIFKTT-----SGTPFLI--PTTGTGAWESALTNT--LSPGDR 86 (401)
Q Consensus 18 ~~~~~~v~~a~~~~~~--~~~~~~~~~~~~~l~~~la~~~g~~-----~~~~i~~--~~g~t~a~~~~~~~~--~~~gd~ 86 (401)
.+.++.+.+++.+... ....+.......++++.++++++.. .++++++ ++|+++|++.++..+ +.+||+
T Consensus 43 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~ 122 (396)
T 2q7w_A 43 TPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKR 122 (396)
T ss_dssp CCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCE
T ss_pred ccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCE
Confidence 4567888888876421 1112323344678999999988432 1345887 999999999987553 469999
Q ss_pred EEEEcCCcchHHHHHHHHHcCCcEEEEeCC--CCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHH
Q 015729 87 IISFLIGQFSLLWIDQQQRLNFNVDVVESD--WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRK 161 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~ 161 (401)
|+++.++|+++. ..++..|++++.++.+ .++.+|++++++.+++.+ .+++++++++++||||.+++ +++|.+
T Consensus 123 Vl~~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~v~~~~p~nptG~~~~~~~l~~l~~ 199 (396)
T 2q7w_A 123 VWVSNPSWPNHK--SVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQ-AGDVVLFHGCCHNPTGIDPTLEQWQTLAQ 199 (396)
T ss_dssp EEEEESCCTHHH--HHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCC-TTCEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred EEEcCCCchhHH--HHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCC-CCCEEEEeCCCCCCCCCCCCHHHHHHHHH
Confidence 999999888764 5567789999999985 456789999999997532 24678888999999999986 457889
Q ss_pred HhhhcCCCcEEEEecccccCcce-------ec-cCc-ccceEEEecCCCcccCCCc--ceEEEe---cHHHHHHhccCCC
Q 015729 162 LLDEYRHPALFLVDGVSSICAID-------FR-MDE-WGIDVALTGSQKALSLPTG--MGIVCA---SPKALEASKTAKS 227 (401)
Q Consensus 162 l~~~~~~~~~li~D~a~~~~~~~-------~~-~~~-~~~di~~~s~~K~l~g~~g--~G~l~~---~~~~~~~~~~~~~ 227 (401)
+|++ +|+++|+|++|+.+... +. ... ...++++.|.+|+++ ++| +|++++ +++..+.+...
T Consensus 200 ~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~riG~~~~~~~~~~~~~~~~~~-- 274 (396)
T 2q7w_A 200 LSVE--KGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFG-LYNERVGACTLVAADSETVDRAFSQ-- 274 (396)
T ss_dssp HHHH--HTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTT-CGGGCCEEEEEECSSHHHHHHHHHH--
T ss_pred HHHH--CCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEecccccc-ccccccceEEEEcCCHHHHHHHHHH--
Confidence 9999 99999999998754321 11 111 135688999999884 445 699987 56443332210
Q ss_pred CccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHH-----HHhcHHHHHHHHHHHHHHHHHHHHHcC----Ccccc
Q 015729 228 VRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLI-----FEEGLENVIERHRRLGKATRLAVEAWG----LKNCT 298 (401)
Q Consensus 228 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~-----~~~g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~ 298 (401)
........ ..+++...+.++.++++.. ...++++.+++++++++++.+.|++++ +++..
T Consensus 275 ----------~~~~~~~~--~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 342 (396)
T 2q7w_A 275 ----------MKAAIRAN--YSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFII 342 (396)
T ss_dssp ----------HHHHHHTT--TSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHH
T ss_pred ----------HHHHHhhc--cCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceec
Confidence 00000011 2234555555555655432 123466778888999999999999876 55544
Q ss_pred CCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 299 QKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
+ ..+.++++.+ +...+...|.++ ||.+.++ +||++.. .+++++++++++|+++
T Consensus 343 ~----~~~~~~~~~~----~~~~~~~~l~~~-gv~v~~~--------~Ris~~~-~~~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 343 K----QNGMFSFSGL----TKEQVLRLREEF-GVYAVAS--------GRVNVAG-MTPDNMAPLCEAIVAV 395 (396)
T ss_dssp H----CCSSEEECCC----CHHHHHHHHHHH-CEECCTT--------CEEEGGG-CCTTTHHHHHHHHHHH
T ss_pred C----CCceEEEecC----CHHHHHHHHHhc-CeeecCC--------ceEEEee-cCHHHHHHHHHHHHhc
Confidence 3 2344555544 344555555444 9998753 5998764 5999999999999875
No 168
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.95 E-value=7.5e-27 Score=220.28 Aligned_cols=305 Identities=9% Similarity=0.080 Sum_probs=206.1
Q ss_pred HHHHHHHHHH-HHHhcCCCCceEEecCChhHHHHHHHhcc-CCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCC-C
Q 015729 42 ALTKTLLEDI-KKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDW-G 118 (401)
Q Consensus 42 ~~~~~l~~~l-a~~~g~~~~~~i~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~ 118 (401)
....++++.+ ++++|. . ..+++++|||+|+..++.++ +++||+|+++.++|+++. ..++..|++++.+++++ +
T Consensus 36 ~~~~~l~~~~~a~~~g~-~-~~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~~~~~~~~--~~~~~~G~~~~~v~~~~~~ 111 (377)
T 3ju7_A 36 PINQRFEQTIMSGFFQN-R-GAVTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPATP--LAAIWCGLEPYFIDISIDD 111 (377)
T ss_dssp HHHHHHHHHHHHHTSTT-C-SEEEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTHHH--HHHHHTTCEEEEECBCTTT
T ss_pred HHHHHHHHHHHHHHhCC-C-CeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHH--HHHHHcCCEEEEEecCCcc
Confidence 5578999999 999992 2 23889999999999999886 899999999999888764 45677899999999874 5
Q ss_pred CCCChHHHHHHH-hccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcc-----cc
Q 015729 119 EGAKLDVLASKL-AADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEW-----GI 192 (401)
Q Consensus 119 ~~~d~~~le~~~-~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~-----~~ 192 (401)
+.+|++++++++ +.+ .++++|+ ++|++|...|+++|.++|+ +|++||+|++|+.|... +.... .+
T Consensus 112 ~~~d~~~l~~~i~~~~--~~tk~v~---~~~~~G~~~~~~~i~~la~---~~~~vi~D~a~a~g~~~-~~~~~g~~~~d~ 182 (377)
T 3ju7_A 112 WYMDKTVLWDKIEELK--EEVAIVV---PYATFGSWMNLEEYEELEK---KGVPVVVDAAPGFGLMN-GGMHYGQDFSGM 182 (377)
T ss_dssp CSBCHHHHHHHHHHHG--GGEEEEC---CBCGGGBCCCCHHHHHHHH---TTCCBEEECTTCTTCEE-TTEETTTTCSSE
T ss_pred CCcCHHHHHHHHhcCC--CCceEEE---EECCCCCccCHHHHHHHHh---cCCEEEEECCCccCCeE-CCEeccCCCCcE
Confidence 689999999988 432 1267776 4578999999999999998 68999999999988642 21122 24
Q ss_pred eEEEecCCCcccCCCcceEEEec-HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcH
Q 015729 193 DVALTGSQKALSLPTGMGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGL 271 (401)
Q Consensus 193 di~~~s~~K~l~g~~g~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~ 271 (401)
++++++.+|+++++. .|+++.+ +++.+++...........+ .....|. ....+. +.+++.......+
T Consensus 183 ~~~S~~~~K~l~~g~-gG~~~~~~~~l~~~~~~~~~~g~~~~~----~~~~~g~--~~~~~~-----~~aa~~~~~l~~l 250 (377)
T 3ju7_A 183 IIYSFHATKPFGIGE-GGLIYSKNEEDIQRIKRMGNFGFDTNR----ECTMMGF--NCKMSE-----YAAAIGIATMKKW 250 (377)
T ss_dssp EEEECBTTSSSCCBS-CEEEEESCHHHHHHHHHHTBTTBCTTS----CBCSSCC--BCCCCH-----HHHHHHHHHHHTH
T ss_pred EEEECCCCCcCCCCC-cEEEEECCHHHHHHHHHHHhcCCCCCC----ceeeccc--cCCCCH-----HHHHHHHHHHHHH
Confidence 555666889997644 3666654 5555555432211100000 0000111 112222 2333333233356
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC-Ccc-ccCCCccCCc-eeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC-C------
Q 015729 272 ENVIERHRRLGKATRLAVEAWG-LKN-CTQKEEWFSD-TVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK-V------ 341 (401)
Q Consensus 272 ~~~~~~~~~~~~~l~~~L~~~g-~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~-~------ 341 (401)
+...++.+++++++.+.|.+++ +.+ ..+......+ .++.+.++++.+.+++.+.|.++ ||.++.++.. .
T Consensus 251 ~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-gI~~~~~~~~~~~~~~~~ 329 (377)
T 3ju7_A 251 DDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEEVRNKQVIEDLKKQ-KIEARLYFSPSCHQQVLF 329 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTTSCHHHHHHHHHTT-TBCCBCTTSSCGGGSGGG
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCChhhHHHHHHHHHHC-CCceecccCCccccchhh
Confidence 7788889999999999999873 322 1221111222 23456666555688999999876 9998776521 0
Q ss_pred C--------------CcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 342 A--------------GKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 342 ~--------------~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
. ...+|+.++..+|++|++++++.|++.+..
T Consensus 330 ~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~ 374 (377)
T 3ju7_A 330 RNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVVS 374 (377)
T ss_dssp TTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC----
T ss_pred hcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 0 134999999899999999999999877643
No 169
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.95 E-value=2e-27 Score=233.95 Aligned_cols=342 Identities=11% Similarity=0.032 Sum_probs=218.8
Q ss_pred CcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHh----c--CC--CCceEEecCChhHHHHHHHhc-----cCCC
Q 015729 17 PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIF----K--TT--SGTPFLIPTTGTGAWESALTN-----TLSP 83 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~~--~~~~i~~~~g~t~a~~~~~~~-----~~~~ 83 (401)
|...++.+++++.+.......+.......++++.+++++ + .+ +++++++|+|+++|+..++.+ ++++
T Consensus 113 ~~~~~~~~v~a~~~~~~~~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~l~~~~l~~~ 192 (533)
T 3f6t_A 113 LGLNRDKVVAEWVNGAVANNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKK 192 (533)
T ss_dssp TCCCHHHHHHHHHHHHHTCSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCT
T ss_pred CCcCCcHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhccCC
Confidence 333456666655543321111111122345555555555 2 22 235699999999999999887 7899
Q ss_pred CCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCC----CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchH--
Q 015729 84 GDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDW----GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLS-- 157 (401)
Q Consensus 84 gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~----~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~-- 157 (401)
||+|+++.++|.++. ..++..|++++.++++. ++.+|+++++++++ ++++++++++|+||||.+++.+
T Consensus 193 gd~Viv~~p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~----~~~k~v~l~~p~NPtG~~~~~~~l 266 (533)
T 3f6t_A 193 GDKIAINEPIFTPYL--RIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKD----PSIKALIVVNPTNPTSKEFDTNAL 266 (533)
T ss_dssp TCEEEEESSCCHHHH--TSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSC----TTEEEEEEESSCTTTCBCCCHHHH
T ss_pred cCEEEEcCCCcHHHH--HHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhC----CCCeEEEEeCCCCCCccccCHHHH
Confidence 999999999887764 45667888999998853 46789999999886 4679999999999999999876
Q ss_pred -HHHHHhh-hcCCCcEEEEecccccCcce---eccCcccceEEEecCCCcccCCCc--ceEEEecHH-----HHHHhccC
Q 015729 158 -KVRKLLD-EYRHPALFLVDGVSSICAID---FRMDEWGIDVALTGSQKALSLPTG--MGIVCASPK-----ALEASKTA 225 (401)
Q Consensus 158 -~i~~l~~-~~~~~~~li~D~a~~~~~~~---~~~~~~~~di~~~s~~K~l~g~~g--~G~l~~~~~-----~~~~~~~~ 225 (401)
+|.++|+ + +|+++|+|++|+..... +.....+.++++.|.+|.++ .+| +|+++++++ +++.+.+.
T Consensus 267 ~~l~~la~~~--~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~g-~~G~RiG~l~~~~~~~~~~li~~l~~~ 343 (533)
T 3f6t_A 267 NAIKQAVEKN--PKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSYSKLFG-CTGWRLGVIALNEKNVFDDNIAHLDKV 343 (533)
T ss_dssp HHHHHHHHHC--TTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEESHHHHT-CGGGCEEEEEEESSCHHHHHHHTSCHH
T ss_pred HHHHHHHHhC--CCCEEEEcCCccccccCccCHhhcCCCCEEEEecCcccCC-CcccceEEEEECcHHHHHHHHHhcchh
Confidence 6777777 6 89999999998743321 11112356799999999884 555 799998876 43333110
Q ss_pred C------------CCccccchHH-HHHHhh-cCCCCCCCCcHHHHHH-HHHHHHHHH--------HhcHHHHHHHHHHHH
Q 015729 226 K------------SVRVFFDWKD-YIKFYN-LGTFWPYTPSIQLLYG-LRAALDLIF--------EEGLENVIERHRRLG 282 (401)
Q Consensus 226 ~------------~~~~~~~~~~-~~~~~~-~g~~~~~~~~~~~~~a-~~~al~~~~--------~~g~~~~~~~~~~~~ 282 (401)
. ....-..+.+ ....+. ...+...+++....++ ...++..+. ...+++.++++++++
T Consensus 344 ~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~ 423 (533)
T 3f6t_A 344 ELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVSERY 423 (533)
T ss_dssp HHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHHHHH
T ss_pred hHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHH
Confidence 0 0000000000 000001 1111122344433332 211334332 112567788888888
Q ss_pred HHHHHHHHHcCCccccCCCccCCceeEEEEcCC------C----------CCHHHHHHHHHhhCCeEEccCCCCC-CCcE
Q 015729 283 KATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS------H----------INSSEIVRRAWQRYNLSLGLGLNKV-AGKV 345 (401)
Q Consensus 283 ~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~------~----------~~~~~l~~~L~~~~~i~v~~g~~~~-~~~~ 345 (401)
+.+.+.|. +++.+..+ ..+.++++.++. + .+..+++..+.+++||.+.+|..+. ..++
T Consensus 424 ~~l~~~L~-~~~~~~~~----~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~ 498 (533)
T 3f6t_A 424 DQLHDAMQ-APKDETDT----NTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGE 498 (533)
T ss_dssp HHHHHHHT-CCCCCSTT----BCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTEEECSSTTE
T ss_pred HHHHHhcC-CCccccCC----CceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEeCCcccCCCCCE
Confidence 99988886 66554433 344567777642 1 3556777777767799999985432 3568
Q ss_pred EEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 346 FRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 346 ~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+||++ +.++++++++++++|+++++++
T Consensus 499 iRls~-a~~~~e~i~~~i~~L~~~l~~~ 525 (533)
T 3f6t_A 499 LRVSQ-ANLPTEDYALIGKQVLELLKEY 525 (533)
T ss_dssp EEEES-SSSCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEE-eeCCHHHHHHHHHHHHHHHHHH
Confidence 99987 4478999999999999998764
No 170
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.95 E-value=2.8e-26 Score=212.84 Aligned_cols=283 Identities=12% Similarity=0.078 Sum_probs=200.4
Q ss_pred HHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCCh
Q 015729 46 TLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKL 123 (401)
Q Consensus 46 ~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~ 123 (401)
++++.+++++|.+ + .+++++|++|+..++.+++++||+|+++.+.|+++. +...++..|++++.++. .|+
T Consensus 2 ~l~~~la~~~g~~--~-~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~ 73 (331)
T 1pff_A 2 ALEGKIAKLEHAE--A-CAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM-----AVP 73 (331)
T ss_dssp HHHHHHHHHHTCS--E-EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-----TST
T ss_pred hHHHHHHHHhCCC--e-EEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC-----CCH
Confidence 6899999999986 3 455566699999999888999999999999988764 22235668999998875 378
Q ss_pred HHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcc
Q 015729 124 DVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKAL 203 (401)
Q Consensus 124 ~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l 203 (401)
+++++.++ ++++++++++++||||.+.|+++|.++|++. +|+++|+|++|+.+....+. ..++|++++|.||++
T Consensus 74 ~~l~~~i~----~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~-~~~~li~D~a~~~~~~~~~~-~~~~d~~~~s~~K~~ 147 (331)
T 1pff_A 74 GNIEKHLK----PNTRIVYFETPANPTLKVIDIEDAVKQARKQ-KDILVIVDNTFASPILTNPL-DLGVDIVVHSATKYI 147 (331)
T ss_dssp THHHHTCC----TTEEEEEEESSCTTTCCCCCHHHHHHHHTTS-SSCEEEEECTTTHHHHCCGG-GGTCSEEEEETTTTT
T ss_pred HHHHHhhc----CCCeEEEEECCCCCcCcccCHHHHHHHHhhh-cCCEEEEECCCcccccCChh-hcCCcEEEEECcccc
Confidence 89999886 3679999999999999999999999999973 58999999999877643333 467999999999999
Q ss_pred cCCCc--ceEEEecH-HHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHH
Q 015729 204 SLPTG--MGIVCASP-KALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRR 280 (401)
Q Consensus 204 ~g~~g--~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~ 280 (401)
+++.+ .|++++++ ++.+.+...... ++..+.+....+++..+++.+ ....++..+
T Consensus 148 ~~~~~r~~G~~~~~~~~~~~~l~~~~~~-----------------~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~ 205 (331)
T 1pff_A 148 NGHTDVVAGLVCSRADIIAKVKSQGIKD-----------------ITGAIISPHDAWLITRGTLTL-----DMRVKRAAE 205 (331)
T ss_dssp SSSSSCCCEEEEECHHHHHHHHHTCCCC-----------------CCCCCCCHHHHHHHHHHHHHH-----HHHHHHHHH
T ss_pred CCCCCceEEEEEeCcHHHHHHHHHHHHh-----------------hcCCCCCHHHHHHHHcCcchH-----HHHHHHHHH
Confidence 76654 69999998 887777653211 012245554444444444432 233444555
Q ss_pred HHHHHHHHHHHc-C--------------CccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCC-------
Q 015729 281 LGKATRLAVEAW-G--------------LKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGL------- 338 (401)
Q Consensus 281 ~~~~l~~~L~~~-g--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~------- 338 (401)
+.+.+.+.|++. . +++..+.. ...+.++.+.++ +..++.+.|.+ .||.++...
T Consensus 206 ~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~l~~-~gI~~~~~s~g~~~sl 280 (331)
T 1pff_A 206 NAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQM-KMFGSMIAFDVD---GLEKAKKVLDN-CHVVSLAVSLGGPESL 280 (331)
T ss_dssp HHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHC-SSCCSEEEEECS---SHHHHHHHHHT-CSSSEECSSCCSSSCE
T ss_pred HHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhC-CCCceEEEEEEC---CHHHHHHHHHh-CCCceeccCCCCccee
Confidence 666666666543 1 11111111 123457778874 56677777765 488765431
Q ss_pred --C-----------------CCCCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 339 --N-----------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 339 --~-----------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
. ....+.+||++...+++++++.++++|+++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 281 IQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp EECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred eecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 1 012478999999888999999999988753
No 171
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.95 E-value=2.9e-26 Score=218.02 Aligned_cols=309 Identities=13% Similarity=0.146 Sum_probs=216.8
Q ss_pred ChHHHHHHHccCcCC--C-CCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC-------CCCCeEEE
Q 015729 20 IPDQVIRAMNRNNED--Y-RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL-------SPGDRIIS 89 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~--~-~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~-------~~gd~vl~ 89 (401)
.+|++++++.+.... + ......+...++++.+++++|. +++++++||++|++.++..+. .++|+|++
T Consensus 53 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~---~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~vi~ 129 (395)
T 3nx3_A 53 NHAKFNAKIKAQVDKLLHTSNLYYNENIAAAAKNLAKASAL---ERVFFTNSGTESIEGAMKTARKYAFNKGVKGGQFIA 129 (395)
T ss_dssp SCHHHHHHHHHHHTTCSCCCTTSBCHHHHHHHHHHHHHHTC---SEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCEEEE
T ss_pred CCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcCC---CeEEEeCCHHHHHHHHHHHHHHHhhccCCCCCEEEE
Confidence 357777777664322 1 1123356788999999999973 359999999999999886643 45799999
Q ss_pred EcCCcchHHHHHHH-----------HHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---
Q 015729 90 FLIGQFSLLWIDQQ-----------QRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN--- 155 (401)
Q Consensus 90 ~~~~~~~~~~~~~~-----------~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~--- 155 (401)
.+++|++....... ...+.++..++.+ |+++++++++ ++++++++.+++|++|.+.+
T Consensus 130 ~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~----~~~~~v~~~~~~~~~G~~~~~~~ 200 (395)
T 3nx3_A 130 FKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYN-----DISSVEKLVN----EKTCAIILESVQGEGGINPANKD 200 (395)
T ss_dssp ETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTT-----CHHHHHTTCC----TTEEEEEEESEECTTSCEECCHH
T ss_pred EcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCC-----CHHHHHHhcc----CCeEEEEEeCccCCCCcccCCHH
Confidence 99988876421111 1112355555543 7999999886 35789999998999999877
Q ss_pred -hHHHHHHhhhcCCCcEEEEecccc-cCcc--e--eccCcccceEEEecCCCcccCCCcceEEEecHHH-HHHhccCCCC
Q 015729 156 -LSKVRKLLDEYRHPALFLVDGVSS-ICAI--D--FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKA-LEASKTAKSV 228 (401)
Q Consensus 156 -l~~i~~l~~~~~~~~~li~D~a~~-~~~~--~--~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~-~~~~~~~~~~ 228 (401)
+++|.++|++ +|+++|+|++|+ ++.. . .+.....+|++++| |+++++.++|++++++++ .+.+.....
T Consensus 201 ~l~~l~~l~~~--~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~t~s--K~~~~G~~~G~~~~~~~~~~~~~~~~~~- 275 (395)
T 3nx3_A 201 FYKALRKLCDE--KDILLIADEIQCGMGRSGKFFAYEHAQILPDIMTSA--KALGCGLSVGAFVINQKVASNSLEAGDH- 275 (395)
T ss_dssp HHHHHHHHHHH--HTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGTTTSCCEEEEECHHHHHHHSCTTCC-
T ss_pred HHHHHHHHHHH--cCCEEEEEecccCCCcCCcchhHHhcCCCCCEEEec--ccccCCCceEEEEEchhhhhhhcCCccc-
Confidence 8999999999 999999999987 3211 1 12223346777665 888776778999999998 777754311
Q ss_pred ccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCc
Q 015729 229 RVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSD 306 (401)
Q Consensus 229 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~ 306 (401)
+ .+++.+...+++..++++.+..+. ..++.+++.+++++.|.++ .+....... ..+
T Consensus 276 ---------------~--~~~~~~~~~~~aa~aal~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~g 333 (395)
T 3nx3_A 276 ---------------G--STYGGNPLVCAGVNAVFEIFKEEK---ILENVNKLTPYLEQSLDELINEFDFCKKRK--GLG 333 (395)
T ss_dssp ---------------S--SCBSCCHHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHHCTTEEEEE--EET
T ss_pred ---------------C--CCCCCCHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHHhCCCeEEEE--eEE
Confidence 1 133466777777788888765543 4555666666666666553 122211111 234
Q ss_pred eeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 307 TVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 307 ~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.++++.+++..+..++.+.|.++ ||.+.++. ++++||++....|++|+++++++|++++++
T Consensus 334 ~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 334 FMQGLSLDKSVKVAKVIQKCQEN-ALLLISCG----ENDLRFLPPLILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp TEEEEEECTTSCHHHHHHHHHHT-TEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEeCCcchHHHHHHHHHHC-CCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 57778886655678899999876 99988763 578999888888999999999999999874
No 172
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.95 E-value=2.1e-26 Score=221.17 Aligned_cols=322 Identities=16% Similarity=0.096 Sum_probs=220.7
Q ss_pred ChHHHHHHHccCcCCC----CCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHh---ccCCCCCeEEEEcC
Q 015729 20 IPDQVIRAMNRNNEDY----RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT---NTLSPGDRIISFLI 92 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~~----~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~---~~~~~gd~vl~~~~ 92 (401)
.++.+++++.+..... ..+...+...++++.|+++++.+.++++++++|+++|++.++. ++.+++ +|++.++
T Consensus 58 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~a~~~~~~~-~vi~~~p 136 (426)
T 1sff_A 58 LHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRS-GTIAFSG 136 (426)
T ss_dssp TCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHTCC-EEEEETT
T ss_pred CCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCcccccEEEEeCchHHHHHHHHHHHHHhhCCC-eEEEECC
Confidence 4677777777754321 1234457788999999999943333569999999999999887 566776 8999999
Q ss_pred CcchHHHHHHHHHcCCc-------------EEEEeCCCC-----CCCChHHHHHHHhcc-CCCCceEEEEEecCCCcccc
Q 015729 93 GQFSLLWIDQQQRLNFN-------------VDVVESDWG-----EGAKLDVLASKLAAD-TAHTIKAICIVHNETATGVT 153 (401)
Q Consensus 93 ~~~~~~~~~~~~~~g~~-------------~~~v~~~~~-----~~~d~~~le~~~~~~-~~~~~~~i~~~~~~n~tG~~ 153 (401)
+|++... ......|.+ ++.++.+.+ +.+|++++++++++. ..+++++|++++.++.||..
T Consensus 137 ~y~~~~~-~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~p~~~ntG~~ 215 (426)
T 1sff_A 137 AYHGRTH-YTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFY 215 (426)
T ss_dssp CCCCSSH-HHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECSBCTTTTSC
T ss_pred CcCCCch-HhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEEecccCCCCcc
Confidence 8876542 123333432 667776531 236899999998731 00246777776543339977
Q ss_pred cc----hHHHHHHhhhcCCCcEEEEecccccCcc-----eeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhcc
Q 015729 154 NN----LSKVRKLLDEYRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKT 224 (401)
Q Consensus 154 ~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~ 224 (401)
.+ +++|.++|++ +|++||+|++|+.... .++.....+|++ |.+|+++++.++|++++++++.+.+..
T Consensus 216 ~~~~~~l~~l~~l~~~--~~~~li~De~~~~~~~~g~~~~~~~~~~~~di~--s~sK~~~~GlriG~~~~~~~~~~~l~~ 291 (426)
T 1sff_A 216 ASSPAFMQRLRALCDE--HGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLT--TFAKSIAGGFPLAGVTGRAEVMDAVAP 291 (426)
T ss_dssp BCCHHHHHHHHHHHHH--HTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEE--EECGGGGTSSCCEEEEEEHHHHTTSCT
T ss_pred cCCHHHHHHHHHHHHH--cCCEEEEechhhccCcccchhhhhhcCCCCCEE--EEcccccCCCceEEEEEcHHHHhhhcc
Confidence 66 8999999999 9999999999983211 112222346766 555999754447999999988776643
Q ss_pred CCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcC--CccccCCCc
Q 015729 225 AKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWG--LKNCTQKEE 302 (401)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g--~~~~~~~~~ 302 (401)
.. ....++.+...++++.++++.+.+. ...++..++++++++.|++++ ++......+
T Consensus 292 ~~------------------~~~~~~~~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 350 (426)
T 1sff_A 292 GG------------------LGGTYAGNPIACVAALEVLKVFEQE---NLLQKANDLGQKLKDGLLAIAEKHPEIGDVRG 350 (426)
T ss_dssp TS------------------BCCSSSSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHTCTTEEEEEE
T ss_pred CC------------------cCcCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEE
Confidence 11 0113346677777888888877654 356777888888888887752 433211111
Q ss_pred cCCceeEEEEcC--------CCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 303 WFSDTVTAVIVP--------SHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 303 ~~~~~~~~~~~~--------~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.+.++++.++ ++.+..++.+.|.++ ||.+.++... ++++||++....+++|+++++++|+++++++
T Consensus 351 --~g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-gi~v~~~~~~--~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 351 --LGAMIAIELFEDGDHNKPDAKLTAEIVARARDK-GLILLSCGPY--YNVLRILVPLTIEDAQIRQGLEIISQCFDEA 424 (426)
T ss_dssp --ETTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHT-TEECEEESTT--SCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred --EEEEEEEEEecCccccCCChHHHHHHHHHHHHC-CcEEecCCCC--CCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 2457778873 223456788888876 9999988542 5789998876789999999999999998754
No 173
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.95 E-value=2.6e-25 Score=211.04 Aligned_cols=328 Identities=13% Similarity=0.075 Sum_probs=224.1
Q ss_pred ccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc-------CCCCC
Q 015729 13 FVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-------LSPGD 85 (401)
Q Consensus 13 ~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~-------~~~gd 85 (401)
+-.++..+++++++++.+...... +.......++++.+++++|.+. .++++|||+|+..++.++ +++||
T Consensus 6 ~~~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~~l~~~la~~~~~~~---~i~~~sGt~a~~~al~~~~~~~~~~~~~g~ 81 (390)
T 3b8x_A 6 YPLASSTWDDLEYKAIQSVLDSKM-FTMGEYVKQYETQFAKTFGSKY---AVMVSSGSTANLLMIAALFFTKKPRLKKGD 81 (390)
T ss_dssp BCSCCCCCCHHHHHHHHHHHHHTC-CSSCHHHHHHHHHHHHHHTCSE---EEEESCHHHHHHHHHHHTTSSSSCSCCTTC
T ss_pred ccCCCCCCCHHHHHHHHHHHHcCC-CCCChHHHHHHHHHHHHHCCCc---EEEECCHHHHHHHHHHHHHhhhhcCCCCcC
Confidence 445788889999998877543211 2234678899999999999862 788899999999999887 78999
Q ss_pred eEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCC-CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhh
Q 015729 86 RIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG-EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLD 164 (401)
Q Consensus 86 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~ 164 (401)
+|+++.++|++.. ..++..|++++.++.+++ +.+|++++++++++ +++++++++ ++|...++++|.++|+
T Consensus 82 ~Vi~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~----~~~~v~~~~---~~g~~~~~~~i~~l~~ 152 (390)
T 3b8x_A 82 EIIVPAVSWSTTY--YPLQQYGLRVKFVDIDINTLNIDIESLKEAVTD----STKAILTVN---LLGNPNNFDEINKIIG 152 (390)
T ss_dssp EEEEESSSCHHHH--HHHHHTTCEEEEECBCTTTCSBCHHHHHHHCCT----TEEEEEEEC---GGGCCCCHHHHHHHHT
T ss_pred EEEECCCCcHHHH--HHHHHcCCEEEEEecCccccCcCHHHHHHHhCc----CCeEEEEEC---CccChhhHHHHHHHHH
Confidence 9999999988775 345678999999999875 78899999999874 568888874 6788899999999999
Q ss_pred hcCCCcEEEEecccccCcceeccCcccc--eEEEec--CCCcccCCCcceEEEecH-HHHHHhccCCCCccccch-----
Q 015729 165 EYRHPALFLVDGVSSICAIDFRMDEWGI--DVALTG--SQKALSLPTGMGIVCASP-KALEASKTAKSVRVFFDW----- 234 (401)
Q Consensus 165 ~~~~~~~li~D~a~~~~~~~~~~~~~~~--di~~~s--~~K~l~g~~g~G~l~~~~-~~~~~~~~~~~~~~~~~~----- 234 (401)
+ +|+++|+|++|+.|... +....+. |+.++| ++|.+.++.| |++++++ ++.+++......+...+.
T Consensus 153 ~--~~~~li~D~a~~~g~~~-~~~~~g~~~~~~~~s~~~~k~~~~g~g-G~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~ 228 (390)
T 3b8x_A 153 G--RDIILLEDNCESMGATF-NNKCAGTFGLMGTFSSFYSNHIATMEG-GCIVTDDEEIYHILLCIRAHGWTRNLPKKNK 228 (390)
T ss_dssp T--SCCEEEEECTTCTTCEE-TTEETTSSSSEEEEECCTTSSSCSSSC-EEEEESCHHHHHHHHHHTBTTBSTTSCSEET
T ss_pred H--cCCEEEEECcCcccCEE-CCcccccccceEEEEccCCCCCccCCc-eEEEeCCHHHHHHHHHHHhcCCCcccccccc
Confidence 9 99999999999987654 4444444 555544 3455655566 8999886 555444322111100000
Q ss_pred -------HHHHH--Hhh-cCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCcc
Q 015729 235 -------KDYIK--FYN-LGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEW 303 (401)
Q Consensus 235 -------~~~~~--~~~-~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 303 (401)
..+.. .+. .| +...+++...++++ ++++ .+++..++.+++++++.+.|+++ |+++.... ..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~aa~~l-~~l~-----~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~ 300 (390)
T 3b8x_A 229 VTGVKSDDQFEESFKFVLPG-YNVRPLEMSGAIGI-EQLK-----KLPRFISVRRKNAEYFLDKFKDHPYLDVQQET-GE 300 (390)
T ss_dssp TTEECCSCTTTSSSCBCSCC-CBCCCCHHHHHHHH-HHHH-----HHHHHHHHHHHHHHHHHHHHTTCSSEEECCCC-SB
T ss_pred ccccccccccccccceeccc-cccCcCHHHHHHHH-HHHH-----HHHHHHHHHHHHHHHHHHHhcCCCCcccCCCC-CC
Confidence 00000 000 11 11113334322222 2233 35678888899999999999886 77665422 11
Q ss_pred CCceeEEEEcCC--CCCHHHHHHHHHhhCCeEEccCCCC---CC----------------------CcEEEEeecccCCH
Q 015729 304 FSDTVTAVIVPS--HINSSEIVRRAWQRYNLSLGLGLNK---VA----------------------GKVFRIGHLGHLNE 356 (401)
Q Consensus 304 ~~~~~~~~~~~~--~~~~~~l~~~L~~~~~i~v~~g~~~---~~----------------------~~~~Ri~~~~~~~~ 356 (401)
..+..+.+.++. +.+..++.+.|.++ ||.++..+.. .. ...+||+++..+|+
T Consensus 301 ~~~~~~~i~~~~~~~~~~~~l~~~L~~~-gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~ 379 (390)
T 3b8x_A 301 SSWFGFSFIIKKDSGVIRKQLVENLNSA-GIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELF 379 (390)
T ss_dssp CCCCEEEEEECTTSCCCHHHHHHHHHHT-TBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCH
T ss_pred cccEEEEEEecCcCcccHHHHHHHHHHC-CCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCH
Confidence 233345566642 56788999999765 9998864321 01 02599999999999
Q ss_pred HHHHHHHHHH
Q 015729 357 LQLLGCLAGV 366 (401)
Q Consensus 357 ~di~~~~~~i 366 (401)
+|+++++++|
T Consensus 380 ~di~~i~~~l 389 (390)
T 3b8x_A 380 DEIDYLREVL 389 (390)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhh
Confidence 9999999876
No 174
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.95 E-value=7.5e-26 Score=221.04 Aligned_cols=300 Identities=12% Similarity=0.085 Sum_probs=210.4
Q ss_pred HHHHHHHHHHHh-----cCC-CCceEEecCChhHHHHHHHhccCCCCC----eEEEEcCCcchHHHHHHHHHcCCcEEEE
Q 015729 44 TKTLLEDIKKIF-----KTT-SGTPFLIPTTGTGAWESALTNTLSPGD----RIISFLIGQFSLLWIDQQQRLNFNVDVV 113 (401)
Q Consensus 44 ~~~l~~~la~~~-----g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd----~vl~~~~~~~~~~~~~~~~~~g~~~~~v 113 (401)
..++++.+++++ |.+ .++++++++|+++|+..++.+++.+|| +|+++.|.|+++. ..++..|++++.+
T Consensus 131 ~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~--~~~~~~g~~~v~~ 208 (498)
T 3ihj_A 131 VNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYS--AVISELDAIQVNY 208 (498)
T ss_dssp CHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHH--HHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHH--HHHHHcCCEEEEe
Confidence 445666666655 343 345699999999999999999888875 9999999888654 5567789999999
Q ss_pred eCCCC--CCCChHHHHHHHhccCCC-CceEEEEEecCCCcccccc---hHHHHHHhhhcCCCcEEEEecccccCcce---
Q 015729 114 ESDWG--EGAKLDVLASKLAADTAH-TIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDGVSSICAID--- 184 (401)
Q Consensus 114 ~~~~~--~~~d~~~le~~~~~~~~~-~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~li~D~a~~~~~~~--- 184 (401)
+++++ +.+|+++|++++++.... +++++++++|+||||.+++ +++|.++|++ +|++||+|++|+.+...
T Consensus 209 ~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~--~~~~li~De~y~~~~~~~~~ 286 (498)
T 3ihj_A 209 YLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWE--EKLFLLADEVYQDNVYSPDC 286 (498)
T ss_dssp ECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH--HTCEEEEECTTTTCBCCTTC
T ss_pred eccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHH--cCcEEEEEcCccccccCCCC
Confidence 98764 578999999999763211 4799999999999999987 5668889999 99999999999754321
Q ss_pred --eccCc----------ccc-eEEEecCCCcccC--CCcceEEE---ecHHHHHHhccCCCCccccchHHHHHHhhcCCC
Q 015729 185 --FRMDE----------WGI-DVALTGSQKALSL--PTGMGIVC---ASPKALEASKTAKSVRVFFDWKDYIKFYNLGTF 246 (401)
Q Consensus 185 --~~~~~----------~~~-di~~~s~~K~l~g--~~g~G~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 246 (401)
..+.. ... .+++.|.||++.| +.++|+++ .++++.+.+... . ..
T Consensus 287 ~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~-------------~--~~--- 348 (498)
T 3ihj_A 287 RFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKL-------------L--SV--- 348 (498)
T ss_dssp CCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHH-------------H--HH---
T ss_pred CcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHH-------------H--hc---
Confidence 11111 011 3678899999953 44469988 477777665431 0 00
Q ss_pred CCCCCcHHHHHHHHHHHH----------HHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEc--
Q 015729 247 WPYTPSIQLLYGLRAALD----------LIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIV-- 313 (401)
Q Consensus 247 ~~~~~~~~~~~a~~~al~----------~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-- 313 (401)
..+++....+++.++++ .+.+ ..+..++++.++++.+.+.|+++ |+++..+. .+.++++.+
T Consensus 349 -~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~-~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~----gg~~~~~~l~~ 422 (498)
T 3ihj_A 349 -RLCPPVSGQAAMDIVVNPPVAGEESFEQFSR-EKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQ----GAMYAFPRIFI 422 (498)
T ss_dssp -SCCCCHHHHHHHHHHTCCCCTTSTTHHHHHH-HHHHHHHHHHHHHHHHHHHHHTSTTEECCCCC----BSSEECCEECC
T ss_pred -cCCCCHHHHHHHHHHhcCCccCcccHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCcEecCCC----eEEEEEEeccC
Confidence 11355555555555542 1111 13567788899999999999987 87776543 344555444
Q ss_pred CC---------CCCHHHH-HHHHHhhCCeEEccCCCCC---CCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 314 PS---------HINSSEI-VRRAWQRYNLSLGLGLNKV---AGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 314 ~~---------~~~~~~l-~~~L~~~~~i~v~~g~~~~---~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
|. +.+.+++ +..++++.||.+.+|..+. ...++|+++. .+++++++++++|+++++++
T Consensus 423 p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~--~~~e~l~~~i~~L~~~~~~~ 493 (498)
T 3ihj_A 423 PAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTIL--PPVEKLKTVLQKVKDFHINF 493 (498)
T ss_dssp CHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred chhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeC--CCHHHHHHHHHHHHHHHHHH
Confidence 21 3344553 4555555599999985432 2357999884 68999999999999988754
No 175
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.95 E-value=1.4e-25 Score=212.72 Aligned_cols=288 Identities=16% Similarity=0.079 Sum_probs=204.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (401)
.....++++.++++++.+ +.+++ ++|++|+..++.+++++||+|+++.++|++.. +...++..|++++.++.+
T Consensus 51 ~~~~~~l~~~la~~~~~~--~~i~~-~sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-- 125 (386)
T 1cs1_A 51 NPTRDVVQRALAELEGGA--GAVLT-NTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQG-- 125 (386)
T ss_dssp CHHHHHHHHHHHHHHTCS--EEEEE-SSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTT--
T ss_pred CccHHHHHHHHHHHhCCC--cEEEe-CCHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCC--
Confidence 456789999999999986 33555 55699999999888999999999999988754 334457789999988864
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEec
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s 198 (401)
|++++++.+++ +++++++++++||+|.+.|+++|.++|++ +|+++|+|++|+.+...... ..++|++++|
T Consensus 126 ---d~~~l~~~i~~----~~~~v~~~~~~nptG~~~~l~~i~~l~~~--~~~~li~De~~~~~~~~~~~-~~~~di~~~s 195 (386)
T 1cs1_A 126 ---DEQALRAALAE----KPKLVLVESPSNPLLRVVDIAKICHLARE--VGAVSVVDNTFLSPALQNPL-ALGADLVLHS 195 (386)
T ss_dssp ---CHHHHHHHHHT----CCSEEEEECSCTTTCCCCCHHHHHHHHHH--TTCEEEEECTTTCTTTCCGG-GGTCSEEEEE
T ss_pred ---CHHHHHHhhcc----CCcEEEEeCCCCCCCcccCHHHHHHHHHH--cCCEEEEECCCcccccCCcc-ccCceEEEEc
Confidence 89999999974 56999999999999999999999999999 99999999999877654333 4678999999
Q ss_pred CCCcccCCCcc--eEEEecH-HHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHH
Q 015729 199 SQKALSLPTGM--GIVCASP-KALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVI 275 (401)
Q Consensus 199 ~~K~l~g~~g~--G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~ 275 (401)
.||+++++.+. |++++++ ++.+.+.... . + +.++.+...++++..+++ .+....
T Consensus 196 ~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~------------~----~--~~~~~~~~~~~~~~~~l~-----~~~~~~ 252 (386)
T 1cs1_A 196 CTKYLNGHSDVVAGVVIAKDPDVVTELAWWA------------N----N--IGVTGGAFDSYLLLRGLR-----TLVPRM 252 (386)
T ss_dssp TTTTTTCSSCCCCEEEEESSHHHHHHHHHHH------------H----H--HTCBCCHHHHHHHHHHHT-----THHHHH
T ss_pred CcccccCCCCceeEEEEeCcHHHHHHHHHHH------------H----h--cCCCCCHHHHHHHHhccc-----HHHHHH
Confidence 99999766553 9999986 6666554310 0 0 012345543333333333 234556
Q ss_pred HHHHHHHHHHHHHHHHc-CCccc-cCC------------CccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccC-CC-
Q 015729 276 ERHRRLGKATRLAVEAW-GLKNC-TQK------------EEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLG-LN- 339 (401)
Q Consensus 276 ~~~~~~~~~l~~~L~~~-g~~~~-~~~------------~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g-~~- 339 (401)
++..++.+.+.+.|+++ .+... .+. .....+.++.+.+++ ...++.+.|.+ .||.++.. +.
T Consensus 253 ~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~-~gi~~~~~~~g~ 329 (386)
T 1cs1_A 253 ELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG--DEQTLRRFLGG-LSLFTLAESLGG 329 (386)
T ss_dssp HHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS--CHHHHHHHHHT-CSSSEEBSCCCS
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC--CHHHHHHHHHh-CCcceEcccCCC
Confidence 66777788888887764 21110 000 001234577788753 25677777765 48887632 11
Q ss_pred ------------------------CCCCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 340 ------------------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 340 ------------------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
...++++||++....++++++.+.++|+++
T Consensus 330 ~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 330 VESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_dssp SSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred cceeeecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 012478999988777777777777777654
No 176
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.95 E-value=9e-27 Score=218.53 Aligned_cols=320 Identities=12% Similarity=0.074 Sum_probs=214.8
Q ss_pred ccccCCCcCC--hHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCe-E
Q 015729 11 HLFVPGPVHI--PDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDR-I 87 (401)
Q Consensus 11 ~~~~~~p~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~-v 87 (401)
.+.++++.+. ++++++++.+.... ..+.......++++.+++++|.+. .++++||++|+..++.+++.+||+ +
T Consensus 16 ~~~~~~~~~~g~~p~v~~ai~~~~~~-~~~~~~~~~~~l~~~la~~~~~~~---~i~~~~g~~a~~~a~~~~~~~g~~~v 91 (359)
T 3pj0_A 16 KLGGNGPRNVGVLTEALQNIDDNLES-DIYGNGAVIEDFETKIAKILGKQS---AVFFPSGTMAQQIALRIWADRKENRR 91 (359)
T ss_dssp ESSSSSCCBHHHHHHHTTTSCTTCBC-CBTTBSHHHHHHHHHHHHHHTCSE---EEEESCHHHHHHHHHHHHHHHHTCCE
T ss_pred hhcCCCccccCCCHHHHHHHHhhccc-CcccCCHHHHHHHHHHHHHhCCCc---EEEeCCHHHHHHHHHHHHHhcCCCcE
Confidence 4555655555 89999999884432 223345678899999999999865 356688999999998888888887 4
Q ss_pred EEEc-CCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCc-ccccchHHH---HH
Q 015729 88 ISFL-IGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETAT-GVTNNLSKV---RK 161 (401)
Q Consensus 88 l~~~-~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~t-G~~~~l~~i---~~ 161 (401)
++.. +.|++.. ........|++++.++. .++.+|+++++++ . +++++|++++++||+ |.+++.+++ .+
T Consensus 92 vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~d~~~l~~~-~----~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~ 165 (359)
T 3pj0_A 92 VAYHPLSHLEIHEQDGLKELQQITPLLLGT-ANQLLTIDDIKSL-R----EPVSSVLIELPQREIGGQLPAFEELEKISE 165 (359)
T ss_dssp EEECTTCHHHHSSTTHHHHHHCCEEEECSC-TTSCCCHHHHHTC-S----SCCSEEEEESSBGGGTSBCCCHHHHHHHHH
T ss_pred EEEeccceeeehhcchHHHhcCceEEecCC-cCCCcCHHHHHhc-c----CCceEEEEEecccCCCcccCCHHHHHHHHH
Confidence 4444 4433332 12233556999998887 4567899999987 3 478999999999888 788876555 99
Q ss_pred HhhhcCCCcEEEEecccccCccee------ccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchH
Q 015729 162 LLDEYRHPALFLVDGVSSICAIDF------RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWK 235 (401)
Q Consensus 162 l~~~~~~~~~li~D~a~~~~~~~~------~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~ 235 (401)
+|++ +|++||+|+++..+.... +.. .+.|+++.|.||+++++.| |+++.++++.+.+...
T Consensus 166 ~~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~d~~~~s~sK~~~~~~g-g~~~~~~~l~~~~~~~---------- 231 (359)
T 3pj0_A 166 YCHE--QGISLHLDGARLWEITPFYQKSAEEIC-ALFDSVYVSFYKGIGGIAG-AILAGNDDFVQEAKIW---------- 231 (359)
T ss_dssp HHHH--HTCEEEEEETTCGGGHHHHTCCHHHHH-TTCSEEEEESSSTTCCSSC-EEEEECHHHHHHHHHH----------
T ss_pred HHHH--cCCEEEEECcchhcchhhhCCCHHHhh-ccCCEEEEeccccCCCcce-EEEECCHHHHHHHHHH----------
Confidence 9999 999999999986543211 111 3578999999999977766 8999999987766431
Q ss_pred HHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcC
Q 015729 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVP 314 (401)
Q Consensus 236 ~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~ 314 (401)
.....+. .++.+... ++...+++.. . +..+++.++++++.+.|+++ |+++.... . .. .++++.++
T Consensus 232 ---~~~~~~~--~~~~~~~~-~a~~~~l~~~----~-~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~-~~-~~~~~~~~ 297 (359)
T 3pj0_A 232 ---KRRYGGD--LISLYPYI-LSADYYFEKR----I-GKMAEYFEAAKGLAERFNSCSGVKTVPEV-P-VS-NMFHVYFE 297 (359)
T ss_dssp ---HHHTTCC--CSCCHHHH-HHHHHHHHHH----G-GGHHHHHHHHHHHHHHHHTSTTEEEESSS-C-SS-SEEEEEES
T ss_pred ---HHHhCCC--cchhHHHH-HHHHHHHHHH----H-HHhHHHHHHHHHHHHHHhhCCCceeeccC-C-cc-eEEEEEec
Confidence 0001111 11122222 2222333321 2 34455678888999999987 87764211 1 22 35666664
Q ss_pred CC--CCHHHHHHHHHhhCCeEEccCCCCC--CCcEEEEeec---ccCCHHHHHHHHHHHHHH
Q 015729 315 SH--INSSEIVRRAWQRYNLSLGLGLNKV--AGKVFRIGHL---GHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 315 ~~--~~~~~l~~~L~~~~~i~v~~g~~~~--~~~~~Ri~~~---~~~~~~di~~~~~~i~~~ 369 (401)
.. .+..++.+.|.++ ||.+.+|..+. ...++|+++. ...+.+++++++++|.+.
T Consensus 298 ~~~~~~~~~l~~~l~~~-GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 298 NSADEIGAILTKIQDET-GVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp SCHHHHHHHHHHHHHHH-CEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred CccchhHHHHHHHHHhc-CcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 32 2356788888776 99999985322 2356899663 245788999999988765
No 177
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.95 E-value=1.2e-26 Score=224.11 Aligned_cols=285 Identities=14% Similarity=0.139 Sum_probs=195.9
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCC
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGE 119 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 119 (401)
....++++.+++++|.+ .+++++||++|+..++. ++++||+|+++.+.|+++. +...++..|++++.++.+
T Consensus 133 ~~~~~l~~~la~~~g~~---~~i~~~sGt~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~--- 205 (464)
T 1ibj_A 133 PTRDALESLLAKLDKAD---RAFCFTSGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT--- 205 (464)
T ss_dssp HHHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT---
T ss_pred HHHHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC---
Confidence 46889999999999875 37778888999988775 7899999999999887764 223457789999999865
Q ss_pred CCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecC
Q 015729 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (401)
Q Consensus 120 ~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~ 199 (401)
|+++++++++ +++++|++++++||+|.+.|+++|.++|++ +|+++|+|++|+.+...... ..++|++++|.
T Consensus 206 --d~~~l~~~i~----~~tk~v~l~~p~NptG~v~~l~~i~~la~~--~gi~livDea~~~g~~~~~~-~~~~div~~S~ 276 (464)
T 1ibj_A 206 --KLDEVAAAIG----PQTKLVWLESPTNPRQQISDIRKISEMAHA--QGALVLVDNSIMSPVLSRPL-ELGADIVMHSA 276 (464)
T ss_dssp --SHHHHHHHCC----SSEEEEEECSSCTTTCCCCCHHHHHHHHHT--TTCEEEEECTTTCTTTCCGG-GTTCSEEEEET
T ss_pred --CHHHHHHHhc----cCceEEEEeCCCCCCCEeecHHHHHHHHHH--cCCEEEEECCCcccccCChh-hcCCEEEEECC
Confidence 8999999987 367999999999999999999999999999 99999999999876542122 25799999999
Q ss_pred CCcccCCCcc--eEEEecH-HHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHH
Q 015729 200 QKALSLPTGM--GIVCASP-KALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (401)
Q Consensus 200 ~K~l~g~~g~--G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~ 276 (401)
||+++++.|+ |++++++ ++.+.+.... .. .| ++.+....+++.++++. +....+
T Consensus 277 sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~------------~~--~g----~~~~~~~~~a~~~al~~-----~~~r~~ 333 (464)
T 1ibj_A 277 TKFIAGHSDVMAGVLAVKGEKLAKEVYFLQ------------NS--EG----SGLAPFDCWLCLRGIKT-----MALRIE 333 (464)
T ss_dssp TTTTTCSSCCCCEEEEECSHHHHHHHHHHH------------HH--TT----CBCCHHHHHHHHHHHTT-----HHHHHH
T ss_pred cccccCCCCCcEEEEEEChHHHHHHHHHHH------------Hh--cC----CCCCHHHHHHHHhchhh-----HHHHHH
Confidence 9999877665 9999985 6655553210 00 11 22444433333344331 122233
Q ss_pred HHHHHHHHHHHHHHHc---------------CCccccCCCccCCceeEEEEcCCCCC-HHHHHHHHHhhCCeEEccCCC-
Q 015729 277 RHRRLGKATRLAVEAW---------------GLKNCTQKEEWFSDTVTAVIVPSHIN-SSEIVRRAWQRYNLSLGLGLN- 339 (401)
Q Consensus 277 ~~~~~~~~l~~~L~~~---------------g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~L~~~~~i~v~~g~~- 339 (401)
+..++.+.+.+.|++. ++++..++.. ..+.+++|.++ +.+ ...+.+.|.. .+|.++.|..
T Consensus 334 ~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~-g~g~~~~~~l~-~~~~~~~~~~~L~~-~gi~v~~G~~~ 410 (464)
T 1ibj_A 334 KQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAK-GAGSVFSFITG-SVALSKHLVETTKY-FSIAVSFGSVK 410 (464)
T ss_dssp HHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCS-CCCSEEEEECS-CHHHHHHHHHHCSS-SEECSCCCSSS
T ss_pred HHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCC-CCceEEEEEEC-CHHHHHHHHHhcCc-ceEeecCCCCc
Confidence 3334444444445432 2222222211 13457888883 321 2346666643 4777776641
Q ss_pred -----------C-----------CCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 340 -----------K-----------VAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 340 -----------~-----------~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
. ..++++|+++.. ||+++++++|++++++
T Consensus 411 sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~----edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 411 SLISMPCFMSHASIPAEVREARGLTEDLVRISAGI----EDVDDLISDLDIAFKT 461 (464)
T ss_dssp CEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS----SCHHHHHHHHHHHHHS
T ss_pred eeeecccccccccCCHHHHHhcCCCcCeEEEEeCC----CCHHHHHHHHHHHHhh
Confidence 0 124679997654 8999999999999875
No 178
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.95 E-value=1e-25 Score=214.47 Aligned_cols=317 Identities=14% Similarity=0.039 Sum_probs=209.3
Q ss_pred cccCCCcCChHHHHHHHccCcC---CC-CCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeE
Q 015729 12 LFVPGPVHIPDQVIRAMNRNNE---DY-RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRI 87 (401)
Q Consensus 12 ~~~~~p~~~~~~v~~a~~~~~~---~~-~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~v 87 (401)
.+...++...+.+.+++..... .+ .+....+...++++.+++++|.+ + .+++++|++|+..++.+++++||+|
T Consensus 31 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~la~~~g~~--~-~i~~~sG~~a~~~~l~~~~~~gd~v 107 (398)
T 1gc0_A 31 PVYQTATFTFPTVEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLEGGE--A-GLALASGMGAITSTLWTLLRPGDEV 107 (398)
T ss_dssp CBCCCSCBCCC---------------------CCHHHHHHHHHHHHHHTCS--E-EEEESSHHHHHHHHHHHHCCTTCEE
T ss_pred CccCCCccccCCHHHHHHhhcCCcCCCcccCCCChHHHHHHHHHHHHhCCC--c-EEEECCHHHHHHHHHHHHhcCCCEE
Confidence 3444556666777666642111 11 12223467889999999999986 2 5667777999999998889999999
Q ss_pred EEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhh
Q 015729 88 ISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDE 165 (401)
Q Consensus 88 l~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~ 165 (401)
+++.+.|++.. +...++..|++++.++.+ |++++++.+++ ++++|++++++||+|.+.|+++|.++|++
T Consensus 108 l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~i~~----~~~~v~~~~~~nptG~~~~l~~i~~l~~~ 178 (398)
T 1gc0_A 108 LLGNTLYGCTFAFLHHGIGEFGVKLRHVDMA-----DLQALEAAMTP----ATRVIYFESPANPNMHMADIAGVAKIARK 178 (398)
T ss_dssp EEESSCCSHHHHHHHHTGGGGTCEEEEECTT-----CHHHHHHHCCT----TEEEEEEESSCTTTCCCCCHHHHHHHHGG
T ss_pred EEeCCCchhHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCC----CCeEEEEECCCCCCcccccHHHHHHHHHH
Confidence 99999988865 222346789999988764 89999999874 67999999999999999999999999999
Q ss_pred cCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCc--ceEEEecHHHHH-HhccCCCCccccchHHHHHHhh
Q 015729 166 YRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTG--MGIVCASPKALE-ASKTAKSVRVFFDWKDYIKFYN 242 (401)
Q Consensus 166 ~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 242 (401)
+|+++|+|++|+.+...... ..++|+++.|.||+++++.+ .|+++++++.++ .+... ..
T Consensus 179 --~~~~li~D~~~~~~~~~~~~-~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~-------------~~-- 240 (398)
T 1gc0_A 179 --HGATVVVDNTYCTPYLQRPL-ELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQG-------------LK-- 240 (398)
T ss_dssp --GTCEEEEECTTTHHHHCCGG-GGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTH-------------HH--
T ss_pred --cCCEEEEECCCcccccCCch-hhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHH-------------hh--
Confidence 99999999999876543332 45799999999999976543 499999988655 33221 00
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CC--------------ccccCCCccCCce
Q 015729 243 LGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GL--------------KNCTQKEEWFSDT 307 (401)
Q Consensus 243 ~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~--------------~~~~~~~~~~~~~ 307 (401)
+ .+.++.+...++++.++++. +....++..++.+.+.+.|++. ++ .+..+... ..+.
T Consensus 241 -~-~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~-~~~~ 312 (398)
T 1gc0_A 241 -D-MTGAVLSPHDAALLMRGIKT-----LNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMS-QPGG 312 (398)
T ss_dssp -H-HTCCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC-----------------CCTT
T ss_pred -c-cCCCCCCHHHHHHHHhccch-----HHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCC-CCce
Confidence 0 01234566544544444442 3456667777888888888764 11 11111101 2345
Q ss_pred eEEEEcCCCCCHHHHHHHHHhhCCeEEcc---CCC------C-----------------CCCcEEEEeecccCCHHHHHH
Q 015729 308 VTAVIVPSHINSSEIVRRAWQRYNLSLGL---GLN------K-----------------VAGKVFRIGHLGHLNELQLLG 361 (401)
Q Consensus 308 ~~~~~~~~~~~~~~l~~~L~~~~~i~v~~---g~~------~-----------------~~~~~~Ri~~~~~~~~~di~~ 361 (401)
++.|.++. +..++.+.+. +.++.++. |.. + ..++.+||++....++++++.
T Consensus 313 ~~~~~l~~--~~~~~~~~l~-~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~ 389 (398)
T 1gc0_A 313 MIAFELKG--GIGAGRRFMN-ALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLAD 389 (398)
T ss_dssp EEEEEETT--HHHHHHHHHH-HCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHH
T ss_pred EEEEEECC--CHHHHHHHHH-hCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHH
Confidence 77788842 2234444454 44666543 211 0 124789999888888889999
Q ss_pred HHHHHHHH
Q 015729 362 CLAGVEMI 369 (401)
Q Consensus 362 ~~~~i~~~ 369 (401)
+.++|+++
T Consensus 390 l~~al~~~ 397 (398)
T 1gc0_A 390 VQQALKAS 397 (398)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 88888754
No 179
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.95 E-value=8.7e-26 Score=215.72 Aligned_cols=325 Identities=13% Similarity=0.043 Sum_probs=212.0
Q ss_pred CCCCcccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHh-cCCC----CceE--EecCChhHHHHHH--
Q 015729 6 APGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIF-KTTS----GTPF--LIPTTGTGAWESA-- 76 (401)
Q Consensus 6 ~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~-g~~~----~~~i--~~~~g~t~a~~~~-- 76 (401)
+..+.|++.++|..+.+++.++... ....+.......++++.+++++ |... ++.+ ..+.++++|+..+
T Consensus 46 l~~g~~~d~~~~~~v~~a~~~a~~~---~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~ 122 (409)
T 4eu1_A 46 LSIGVYRDDADQPFVLECVKQATLG---TNMDYAPVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGD 122 (409)
T ss_dssp CCCSSCCCTTSCCCCCHHHHTCCCC---SCCCCCCTTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHH
T ss_pred eeeeEEECCCCCEeecHHHHhcCcc---ccccCCCCCCcHHHHHHHHHHHcCCCchhhccCceeeeecccchHHHHHHHH
Confidence 3445555666677777777666211 1122322344568899999876 5441 3346 3488999998865
Q ss_pred -HhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeC--CCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccc
Q 015729 77 -LTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVES--DWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVT 153 (401)
Q Consensus 77 -~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~ 153 (401)
+.++.++||+|+++.|+|.++. ..++..|++++.++. +.++.+|++++++.+++.+ .+++++++++|+||||.+
T Consensus 123 ~~~~~~~~gd~Vlv~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~i~~~~p~NPtG~~ 199 (409)
T 4eu1_A 123 LLNRFVANCNRIYGPDVGYPNHE--SIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAP-EGSVILVHACAHNPTGVD 199 (409)
T ss_dssp HGGGTSSSCCEEEEESSCCTHHH--HHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSC-TTCEEEEESSSCTTTCCC
T ss_pred HHHHhcCCCCEEEEeCCCcHhHH--HHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCC-CCcEEEEECCCCCCCCCC
Confidence 3557789999999999887764 567789999999997 3456789999999997532 245677779999999999
Q ss_pred cchH---HHHHHhhhcCCCcEEEEecccccCcce--------e-cc-CcccceEEEecCCCccc-CCCcceEE---EecH
Q 015729 154 NNLS---KVRKLLDEYRHPALFLVDGVSSICAID--------F-RM-DEWGIDVALTGSQKALS-LPTGMGIV---CASP 216 (401)
Q Consensus 154 ~~l~---~i~~l~~~~~~~~~li~D~a~~~~~~~--------~-~~-~~~~~di~~~s~~K~l~-g~~g~G~l---~~~~ 216 (401)
++.+ +|.++|++ +|+++|+|++|+.+... . .. ......+++.|.+|.++ .+.++|++ +.++
T Consensus 200 ~~~~~l~~i~~~~~~--~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~ 277 (409)
T 4eu1_A 200 PTHDDWRQVCDVIKR--RNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASA 277 (409)
T ss_dssp CCHHHHHHHHHHHHH--TTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSH
T ss_pred CCHHHHHHHHHHHHh--CCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCH
Confidence 9854 58899999 99999999998754321 0 11 12234578889999984 22346885 4566
Q ss_pred HHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHH-----HhcHHHHHHHHHHHHHHHHHHHHH
Q 015729 217 KALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIF-----EEGLENVIERHRRLGKATRLAVEA 291 (401)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~-----~~g~~~~~~~~~~~~~~l~~~L~~ 291 (401)
+..+.+... + ...... ...+++.....++.++++... ...+++.++++.++++++.+.|++
T Consensus 278 ~~~~~l~~~--------~----~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 343 (409)
T 4eu1_A 278 EEAKRLVSQ--------L----ALLIRP--MYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKA 343 (409)
T ss_dssp HHHHHHHHH--------H----HHHHHH--HHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH--------H----HHHHhh--hcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 633322110 0 000000 011244544455555554211 123567888999999999999998
Q ss_pred cC----CccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHH
Q 015729 292 WG----LKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVE 367 (401)
Q Consensus 292 ~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~ 367 (401)
+| +++..+ ..+.++++.+ +. ++...|++++||.+.++ .||++. ..+++|+++++++|+
T Consensus 344 ~g~~~~~~~~~~----~~~~~~~~~~----~~-~~~~~ll~~~gv~v~p~--------~Ri~~~-~~~~~~i~~~~~~l~ 405 (409)
T 4eu1_A 344 CGSVHDWSHIER----QVGMMAYTGL----TR-EQVELLRSEYHIYMTLN--------GRAAVS-GLNSTNVEYVSQAIH 405 (409)
T ss_dssp TTCCSCCHHHHH----SCSSEEECCC----CH-HHHHHHHHHHCEECCTT--------CEEEGG-GCCTTTHHHHHHHHH
T ss_pred cCCCCCcceecC----CceEEEEeCC----CH-HHHHHHHHcCCEEEcCC--------CEEEEE-ecCHhhHHHHHHHHH
Confidence 86 555443 2334554333 33 45666665569998764 278664 467888999999998
Q ss_pred HHH
Q 015729 368 MIL 370 (401)
Q Consensus 368 ~~l 370 (401)
+++
T Consensus 406 ~~l 408 (409)
T 4eu1_A 406 NVT 408 (409)
T ss_dssp HHH
T ss_pred HHh
Confidence 875
No 180
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.91 E-value=1.4e-29 Score=240.80 Aligned_cols=321 Identities=9% Similarity=-0.013 Sum_probs=224.5
Q ss_pred cCChHHHHHHHccCcCCC-CCccHHHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHhccCCCCCeEEEEc
Q 015729 18 VHIPDQVIRAMNRNNEDY-RSPAVPALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (401)
Q Consensus 18 ~~~~~~v~~a~~~~~~~~-~~~~~~~~~~~l~~~la~~~----g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~ 91 (401)
.+.++.+.+++.+..... ..+. ....++++.+++++ |.+ .++++++++|+++|+..++.+++++||+|++..
T Consensus 43 ~~~~~~v~~a~~~~~~~~~~~y~--~~~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~ 120 (392)
T 3b1d_A 43 FEVMPEVKQAIHDYAEQLVYGYT--YASDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINS 120 (392)
Confidence 345677777777754321 1122 11567777777765 321 234599999999999999999899999999999
Q ss_pred CCcchHHHHHHHHHcCCcEEEEeCCCC---CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhh
Q 015729 92 IGQFSLLWIDQQQRLNFNVDVVESDWG---EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDE 165 (401)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~~---~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~ 165 (401)
++|++.. ..++..|++++.++.+.. +.+|++++++.+++ .+++++++++++||||.+++ +++|.++|++
T Consensus 121 p~~~~~~--~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~---~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~ 195 (392)
T 3b1d_A 121 PVYPPFA--RSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVE---NDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQK 195 (392)
Confidence 9887764 456677888888887532 34799999998863 25688999999999999986 7889999999
Q ss_pred cCCCcEEEEecccccCcce-------eccCc--ccceEEEecCCCccc-CCCcceEEEecHH-HHHHhccCCCCccccch
Q 015729 166 YRHPALFLVDGVSSICAID-------FRMDE--WGIDVALTGSQKALS-LPTGMGIVCASPK-ALEASKTAKSVRVFFDW 234 (401)
Q Consensus 166 ~~~~~~li~D~a~~~~~~~-------~~~~~--~~~di~~~s~~K~l~-g~~g~G~l~~~~~-~~~~~~~~~~~~~~~~~ 234 (401)
+|+++|+|++|+.+... ..... .+.++++.|.+|+++ ++.++|+++++++ +.+.+......
T Consensus 196 --~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~------ 267 (392)
T 3b1d_A 196 --HHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLV------ 267 (392)
Confidence 99999999999864321 11111 346788999999995 3445799998654 66655432110
Q ss_pred HHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH-c-CCccccCCCccCCceeEEEE
Q 015729 235 KDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEA-W-GLKNCTQKEEWFSDTVTAVI 312 (401)
Q Consensus 235 ~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~ 312 (401)
+...+++...++++.++++.. ...+++.++++.++++.+.+.|++ + ++.+..+ ..+.++++.
T Consensus 268 -----------~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~~~~~~i~ 331 (392)
T 3b1d_A 268 -----------NNHHEVSSLGYIATETAYRYG-KPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKP----QGTYLIWLD 331 (392)
Confidence 001123444445555555532 234677888888999999999987 5 7766543 234455677
Q ss_pred cCC-CCCHHHHHHHHHhhCCeEEccCCCCC--CCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 313 VPS-HINSSEIVRRAWQRYNLSLGLGLNKV--AGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 313 ~~~-~~~~~~l~~~L~~~~~i~v~~g~~~~--~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
++. +.+..++.+.|.++.||.+.+|.... .++++||++.. +++++++++++|+++++
T Consensus 332 ~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~--~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 332 FSDYGLTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAA--PKSLVEEICKRIVCCLP 391 (392)
Confidence 754 34667888888744599999884432 34679998665 68899999999988764
No 181
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.95 E-value=1.6e-25 Score=216.41 Aligned_cols=325 Identities=15% Similarity=0.072 Sum_probs=209.5
Q ss_pred hHHHHHHHccCcCC--C--CCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCC----C----CCeEE
Q 015729 21 PDQVIRAMNRNNED--Y--RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLS----P----GDRII 88 (401)
Q Consensus 21 ~~~v~~a~~~~~~~--~--~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~----~----gd~vl 88 (401)
++.+++++.+.... + ......+...++.+.++++++... +++++++||++|++.++..... + +|+|+
T Consensus 62 ~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~-~~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi 140 (448)
T 3dod_A 62 KKELDDAIKKQLGKIAHSTLLGMTNVPATQLAETLIDISPKKL-TRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFI 140 (448)
T ss_dssp CHHHHHHHHHHHTTCSCCCCSSSEEHHHHHHHHHHHHHSCTTE-EEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEE
T ss_pred CHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCC-CEEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEE
Confidence 56666666653322 1 122334667789999999986543 4599999999999999876543 3 49999
Q ss_pred EEcCCcchHHHHHHHHHc-----------CCcEEEEeCCCCCCC-----------ChHHHHHHHhccCCCCceEEEEEec
Q 015729 89 SFLIGQFSLLWIDQQQRL-----------NFNVDVVESDWGEGA-----------KLDVLASKLAADTAHTIKAICIVHN 146 (401)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~-----------g~~~~~v~~~~~~~~-----------d~~~le~~~~~~~~~~~~~i~~~~~ 146 (401)
+.+++||+.......... ...+..++.+...+. |+++||+++++.. +++++|+++.+
T Consensus 141 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~a~vi~ep~ 219 (448)
T 3dod_A 141 AMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHH-EEIAALSIESM 219 (448)
T ss_dssp EEC-----------------------------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHHG-GGEEEEEEESS
T ss_pred EECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhCC-CCEEEEEEeCc
Confidence 999988876522111100 113344554432222 4789999987322 35678888888
Q ss_pred C-CCcccccc----hHHHHHHhhhcCCCcEEEEeccccc-Cc--ce--eccCcccceEEEecCCCcccCC-CcceEEEec
Q 015729 147 E-TATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSI-CA--ID--FRMDEWGIDVALTGSQKALSLP-TGMGIVCAS 215 (401)
Q Consensus 147 ~-n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~-~~--~~--~~~~~~~~di~~~s~~K~l~g~-~g~G~l~~~ 215 (401)
+ +++|.+.+ +++|.++|++ +|++||+|++|+. +. .. .+.....+|++++| |+++++ .++|+++++
T Consensus 220 ~~~~~G~~~~~~~~l~~l~~l~~~--~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~t~s--K~l~~G~~~ig~v~~~ 295 (448)
T 3dod_A 220 VQGASGMIVMPEGYLAGVRELCTT--YDVLMIVDEVATGFGRTGKMFACEHENVQPDLMAAG--KGITGGYLPIAVTFAT 295 (448)
T ss_dssp EESTTTCEECCTTHHHHHHHHHHH--TTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTSSCCEEEEEE
T ss_pred ccCCCCeecCCHHHHHHHHHHHHH--hCCEEEEeccccCCCcccchhhhhhcCCCCCEEEec--ccccCCcCceEEEEEC
Confidence 7 89998776 8999999999 9999999999873 21 11 12223346777665 999776 478999999
Q ss_pred HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CC
Q 015729 216 PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GL 294 (401)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~ 294 (401)
+++.+.+....... ..+..+ ..++.++..+++..++++.+.+++ ..++.+++.+++++.|.++ .+
T Consensus 296 ~~~~~~~~~~~~~~---------~~~~~~--~t~~~~~~~~aaa~aal~~~~~~~---~~~~~~~~~~~~~~~l~~l~~~ 361 (448)
T 3dod_A 296 EDIYKAFYDDYENL---------KTFFHG--HSYTGNQLGCAVALENLALFESEN---IVEQVAEKSKKLHFLLQDLHAL 361 (448)
T ss_dssp HHHHHTTCSCGGGC---------CCCCCC--CTTTTCHHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHhhhccccC---------Cccccc--CCCCcCHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHhcC
Confidence 99988776410000 000001 134566777788888888776543 5666777777777777664 33
Q ss_pred ccccCCCccCCceeEEEEcCCCCC-----------HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHH
Q 015729 295 KNCTQKEEWFSDTVTAVIVPSHIN-----------SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCL 363 (401)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~ 363 (401)
...... ...+.++++.+++..+ ..++++.|+++ ||.+.++ ++++||++...+|++|+++++
T Consensus 362 ~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~-----~~~iRi~~~~~~t~e~i~~~l 433 (448)
T 3dod_A 362 PHVGDI--RQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMREL-GMLTRPL-----GDVIAFLPPLASTAEELSEMV 433 (448)
T ss_dssp TTEEEE--EEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHT-TEECCEE-----TTEEEECCCTTCCHHHHHHHH
T ss_pred CCeEEE--EeeeEEEEEEEccCcccccccchhhHHHHHHHHHHHHC-CcEEecc-----CCEEEEECCCCCCHHHHHHHH
Confidence 322211 1234577777754322 36788889877 9998876 478999888788999999999
Q ss_pred HHHHHHHHhc
Q 015729 364 AGVEMILKDV 373 (401)
Q Consensus 364 ~~i~~~l~~~ 373 (401)
++|+++++++
T Consensus 434 ~~l~~~l~~~ 443 (448)
T 3dod_A 434 AIMKQAIHEV 443 (448)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 182
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.95 E-value=8.2e-26 Score=217.33 Aligned_cols=327 Identities=16% Similarity=0.127 Sum_probs=204.6
Q ss_pred hHHHHHHHccCcCC--C--CCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC--------CCCCeEE
Q 015729 21 PDQVIRAMNRNNED--Y--RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL--------SPGDRII 88 (401)
Q Consensus 21 ~~~v~~a~~~~~~~--~--~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~--------~~gd~vl 88 (401)
++.+++++.+.... + ......+...++++.++++++.+.+ ++++++||++|++.++..+. .++++|+
T Consensus 47 ~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi 125 (430)
T 3i4j_A 47 RAEVGERMAAQAARLPFVHGSQFSSDVLEEYAGRLARFVGLPTF-RFWAVSGGSEATESAVKLARQYHVERGEPGRFKVI 125 (430)
T ss_dssp CHHHHHHHHHHHHHCCCCCTTTCEEHHHHHHHHHHHHHTTCTTC-EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEE
T ss_pred CHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHhCCCCCC-EEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEE
Confidence 56666666653211 1 1123456778999999999987654 59999999999999987755 4578999
Q ss_pred EEcCCcchHHHHHHHHHcCC--------------cEEEEeCCCC---CCCChHHHHHHHhccCCCCceEEEEEecCC-Cc
Q 015729 89 SFLIGQFSLLWIDQQQRLNF--------------NVDVVESDWG---EGAKLDVLASKLAADTAHTIKAICIVHNET-AT 150 (401)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g~--------------~~~~v~~~~~---~~~d~~~le~~~~~~~~~~~~~i~~~~~~n-~t 150 (401)
+.+++|++...... ...+. .+..++.+.. +..|++++++++++...+++++|+++.+++ ++
T Consensus 126 ~~~~~yhg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~~~ 204 (430)
T 3i4j_A 126 TRVPSYHGASLGSL-AASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFMAEPVVGASD 204 (430)
T ss_dssp EETTC--------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEEECSSCCGGG
T ss_pred EEeCCcCCCCcccc-cccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEEEcCcccCcC
Confidence 99998887652111 11111 3334443322 123568999988742112457777777778 89
Q ss_pred ccccc----hHHHHHHhhhcCCCcEEEEecccccC-cc--eeccC---cccceEEEecCCCcccCC-CcceEEEecHHHH
Q 015729 151 GVTNN----LSKVRKLLDEYRHPALFLVDGVSSIC-AI--DFRMD---EWGIDVALTGSQKALSLP-TGMGIVCASPKAL 219 (401)
Q Consensus 151 G~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~-~~--~~~~~---~~~~di~~~s~~K~l~g~-~g~G~l~~~~~~~ 219 (401)
|.+.+ +++|.++|++ +|+++|+|++|+.. .. .+... ...+|++++| |+++++ .++|++++++++.
T Consensus 205 G~~~~~~~~l~~l~~l~~~--~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t~s--K~l~~G~~r~G~~~~~~~i~ 280 (430)
T 3i4j_A 205 AALAPAPGYYERVRDICDE--AGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAVLG--KGLAAGYAPLAGLLAAPQVY 280 (430)
T ss_dssp TTCCCCTTHHHHHHHHHHH--HTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEEEC--GGGTTTSSCCEEEEECHHHH
T ss_pred CcccCCHHHHHHHHHHHHH--cCCEEEEechhhCCCcccchhhhhhhcCCCCcEEEEc--ccccCCccccEEEEECHHHH
Confidence 98776 8999999999 99999999998732 11 11122 2346777665 999765 5689999999998
Q ss_pred HHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccc
Q 015729 220 EASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNC 297 (401)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~ 297 (401)
+.+..... . +..+ .+++.++..+++..++++.+.+++ ..++.+++.+++++.|.++ .++..
T Consensus 281 ~~~~~~~~-~-----------~~~~--~t~~~~~~~~aaa~aal~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~ 343 (430)
T 3i4j_A 281 ETVMGGSG-A-----------FMHG--FTYAGHPVSVAAGLSVLDIVERED---LTGAAKERGAQLLAGLQALQARFPQM 343 (430)
T ss_dssp HHHHHTTC-B-----------CCCC--CTTTTCHHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHHCTTE
T ss_pred HHHhccCC-c-----------cccc--CCCCCCHHHHHHHHHHHHHHHccc---HHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 87764210 0 0011 134566777777888888766543 4555666666666666553 22221
Q ss_pred cCCCccCCceeEEEEcCCC---------CCHHHHHHHHHhhCCeEEccCCC---CCCCcEEEEeecccCCHHHHHHHHHH
Q 015729 298 TQKEEWFSDTVTAVIVPSH---------INSSEIVRRAWQRYNLSLGLGLN---KVAGKVFRIGHLGHLNELQLLGCLAG 365 (401)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~---------~~~~~l~~~L~~~~~i~v~~g~~---~~~~~~~Ri~~~~~~~~~di~~~~~~ 365 (401)
.... ..+.++++.+++. ....++.+.|.++ ||.++++.. ...++++||++....+++++++++++
T Consensus 344 ~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~ 420 (430)
T 3i4j_A 344 MQVR--GTGLLLGVVLGDLATGQAFETPGIASRIGAAALKR-GLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLAL 420 (430)
T ss_dssp EEEE--EETTEEEEEEC------------CHHHHHHHHHHT-TEECC-----------CEEEECCCTTCCHHHHHHHHHH
T ss_pred EEEE--EEEEEEEEEeccccccCCCccHHHHHHHHHHHHhC-CCEEEecccccCCCCCCEEEEECCCCCCHHHHHHHHHH
Confidence 1111 1234666766421 1236788888866 999988732 11356799988877899999999999
Q ss_pred HHHHHHhc
Q 015729 366 VEMILKDV 373 (401)
Q Consensus 366 i~~~l~~~ 373 (401)
|+++++++
T Consensus 421 l~~~l~~~ 428 (430)
T 3i4j_A 421 LAGALEDV 428 (430)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998753
No 183
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.95 E-value=2.6e-26 Score=220.05 Aligned_cols=309 Identities=15% Similarity=0.089 Sum_probs=216.3
Q ss_pred ChHHHHHHHccCcCCC--CC-ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCC-------CC-CeEE
Q 015729 20 IPDQVIRAMNRNNEDY--RS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLS-------PG-DRII 88 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~~--~~-~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~-------~g-d~vl 88 (401)
.++.+++++.+..... .. ....+...++++.+++++|. +++++++||++|++.++..+.. +| ++|+
T Consensus 74 ~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~---~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi 150 (420)
T 2pb2_A 74 CHPALVEALKSQGETLWHTSNVFTNEPALRLGRKLIDATFA---ERVLFMNSGTEANETAFKLARHYACVRHSPFKTKII 150 (420)
T ss_dssp TCHHHHHHHHHHHTTCCCCCTTSCCHHHHHHHHHHHHHSSC---SEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEE
T ss_pred CCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhCCC---CeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEE
Confidence 4677777777643221 11 12346778999999999874 3499999999999999877654 66 5899
Q ss_pred EEcCCcchHHHHHHHHHcCCc------------EEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccc---
Q 015729 89 SFLIGQFSLLWIDQQQRLNFN------------VDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVT--- 153 (401)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g~~------------~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~--- 153 (401)
+.+++|++.... .....|.+ +..++.+ |++++++++++ ++++|++++++|++|.+
T Consensus 151 ~~~~~yh~~~~~-~~~~~g~~~~~~~~~p~~~~~~~~~~~-----d~~~le~~i~~----~~~~vi~~p~~~~gG~~~~~ 220 (420)
T 2pb2_A 151 AFHNAFHGRSLF-TVSVGGQPKYSDGFGPKPADIIHVPFN-----DLHAVKAVMDD----HTCAVVVEPIQGEGGVQAAT 220 (420)
T ss_dssp EETTCCCCSSHH-HHHHSSCHHHHTTSSSCCSCEEEECTT-----CHHHHHHHCCT----TEEEEEECSEETTTTSEECC
T ss_pred EEeCCcCCcCHH-HHHhcCCccccccCCCCCCCeEEecCC-----CHHHHHHHhcc----CceEEEEeCCcCCCCeecCC
Confidence 999888765421 22223332 4555532 89999999873 67999999888888862
Q ss_pred -cchHHHHHHhhhcCCCcEEEEecccccCcc---ee--ccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCC
Q 015729 154 -NNLSKVRKLLDEYRHPALFLVDGVSSICAI---DF--RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKS 227 (401)
Q Consensus 154 -~~l~~i~~l~~~~~~~~~li~D~a~~~~~~---~~--~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~ 227 (401)
.++++|.++|++ +|+++|+|++|..... .+ +.....+|++++ +|+++++.++|++++++++.+.+.....
T Consensus 221 ~~~l~~l~~l~~~--~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~diit~--sK~l~~G~~iG~~~~~~~l~~~l~~~~~ 296 (420)
T 2pb2_A 221 PEFLKGLRDLCDE--HQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTS--AKALGGGFPVSAMLTTQEIASAFHVGSH 296 (420)
T ss_dssp HHHHHHHHHHHHH--TTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEE--CGGGGTTSCCEEEEECHHHHTTCC----
T ss_pred HHHHHHHHHHHHH--cCCEEEEEcCCcCcccCCcHHHHHhcCCCCCeEEe--cccccCCCceEEEEEhHHHHHhhcCCCc
Confidence 358899999999 9999999999963211 11 222234788755 6999866678999999987665543100
Q ss_pred CccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCC
Q 015729 228 VRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFS 305 (401)
Q Consensus 228 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~ 305 (401)
+. .++.+...++++.++++.+.+ ++..++.+++.+++.+.|+++ +++...... ..
T Consensus 297 ----------------~~--t~~~~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--~~ 353 (420)
T 2pb2_A 297 ----------------GS--TYGGNPLACAVAGAAFDIINT---PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIR--GM 353 (420)
T ss_dssp ----------------CC--EECCCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE--EE
T ss_pred ----------------Cc--ccCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE--ec
Confidence 11 234666667777777876543 457788888999999998875 333321111 12
Q ss_pred ceeEEEEcCCCC--CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 306 DTVTAVIVPSHI--NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 306 ~~~~~~~~~~~~--~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+.++++.+++.. +..++.+.|.++ ||.+.++. ++++||++....+++|+++++++|+++++++
T Consensus 354 g~~~~v~~~~~~~~~~~~l~~~l~~~-Gi~v~~~~----~~~iRl~~~~~~t~eei~~~~~~l~~~l~~~ 418 (420)
T 2pb2_A 354 GLLIGAELKPKYKGRARDFLYAGAEA-GVMVLNAG----ADVMRFAPSLVVEEADIHEGMQRFAQAVGKV 418 (420)
T ss_dssp TTEEEEEECGGGTTCHHHHHHHHHHT-TEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEECCCchHHHHHHHHHHHHC-CCEEEeCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 456778875432 577899999875 99988763 5689999877789999999999999998753
No 184
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.95 E-value=1.2e-25 Score=217.30 Aligned_cols=327 Identities=16% Similarity=0.149 Sum_probs=222.6
Q ss_pred hHHHHHHHccCcCCC---CC-ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCC--------CCCeEE
Q 015729 21 PDQVIRAMNRNNEDY---RS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLS--------PGDRII 88 (401)
Q Consensus 21 ~~~v~~a~~~~~~~~---~~-~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~--------~gd~vl 88 (401)
++++++++.+..... .. ....+...++++.++++++.+. +++++++||++|++.++..+.. ++|+|+
T Consensus 68 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi 146 (449)
T 3a8u_X 68 RKEIQEAVAKQLSTLDYSPGFQYGHPLSFQLAEKITDLTPGNL-NHVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMI 146 (449)
T ss_dssp CHHHHHHHHHHTTTCSCCCSSSCCCHHHHHHHHHHHTTSSTTE-EEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEE
T ss_pred CHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCC-CEEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEE
Confidence 677888877754322 11 2334567789999999987644 4599999999999999876543 679999
Q ss_pred EEcCCcchHHHHHHHHHcC------------CcEEEEeCCCCC-----CCC--------hHHHHHHHhccCCCCceEEEE
Q 015729 89 SFLIGQFSLLWIDQQQRLN------------FNVDVVESDWGE-----GAK--------LDVLASKLAADTAHTIKAICI 143 (401)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~-----~~d--------~~~le~~~~~~~~~~~~~i~~ 143 (401)
+.+++|++..... ....| ..+..++.+... .+| ++++++++++...+++++|++
T Consensus 147 ~~~~~yhg~~~~~-~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~~~~~vi~ 225 (449)
T 3a8u_X 147 GRARGYHGVNIAG-TSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDASNIAAVFV 225 (449)
T ss_dssp EETTCCCCSSHHH-HHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCGGGEEEEEE
T ss_pred EECCCcCCCChhh-hhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9999888764322 22222 134556544311 146 899999987421125677777
Q ss_pred EecCCCcccccc----hHHHHHHhhhcCCCcEEEEecccc-cCcc--ee--ccCcccceEEEecCCCcccCC-CcceEEE
Q 015729 144 VHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSS-ICAI--DF--RMDEWGIDVALTGSQKALSLP-TGMGIVC 213 (401)
Q Consensus 144 ~~~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~-~~~~--~~--~~~~~~~di~~~s~~K~l~g~-~g~G~l~ 213 (401)
++.++++|.+.+ +++|.++|++ +|+++|+|++|+ ++.. .+ +.....+|++++ +|+++++ .++|+++
T Consensus 226 ~p~~~~tG~~~~~~~~l~~l~~l~~~--~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~s~--sK~l~~G~~~~G~~~ 301 (449)
T 3a8u_X 226 EPLAGSAGVLVPPEGYLKRNREICNQ--HNILLVFDEVITGFGRTGSMFGADSFGVTPDLMCI--AKQVTNGAIPMGAVI 301 (449)
T ss_dssp CSSBTTTTCBCCCTTHHHHHHHHHHH--HTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEE--CGGGGTTSSCCEEEE
T ss_pred cCccCCCCCccCCHHHHHHHHHHHHH--hCCEEEEeccccCccccCcchhhhhcCCCCCEEEE--cccccCCCCceEEEE
Confidence 777788999888 9999999999 999999999995 5421 11 222234687754 5999754 4489999
Q ss_pred ecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-
Q 015729 214 ASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW- 292 (401)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~- 292 (401)
+++++.+.+......... ..+..+ ..++.++..++++.++++.+.++ ...++.+++.+++++.|+++
T Consensus 302 ~~~~~~~~l~~~~~~~~~-------~~~~~~--~t~~~~~~~~aa~~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~ 369 (449)
T 3a8u_X 302 ASTEIYQTFMNQPTPEYA-------VEFPHG--YTYSAHPVACAAGLAALCLLQKE---NLVQSVAEVAPHFEKALHGIK 369 (449)
T ss_dssp EEHHHHHHHHTCSSCTTS-------CSSCCC--CTTTTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHTTT
T ss_pred ECHHHHHHhhccCccccc-------cccccc--CCCcccHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHh
Confidence 999888777542110000 000001 13345677778888888877664 36778888889999999875
Q ss_pred CCccccCCCccCCceeEEEEcCCCCC-----HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHH
Q 015729 293 GLKNCTQKEEWFSDTVTAVIVPSHIN-----SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVE 367 (401)
Q Consensus 293 g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~ 367 (401)
+++...... ..+.++++.++.... ..++.+.|.++ ||.+.++ ++++||++....+++|+++++++|+
T Consensus 370 ~~~~~~~~~--~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~-----g~~iRis~~~~~t~~~i~~~l~~l~ 441 (449)
T 3a8u_X 370 GAKNVIDIR--NFGLAGAIQIAPRDGDAIVRPFEAGMALWKA-GFYVRFG-----GDTLQFGPTFNSKPQDLDRLFDAVG 441 (449)
T ss_dssp TSTTEEEEE--EETTEEEEEECCBTTBSSHHHHHHHHHHHHH-TEECEEE-----TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred cCCCeEEEe--eeEEEEEEEEecCcccccccHHHHHHHHHHC-CcEEecC-----CCEEEEECCCcCCHHHHHHHHHHHH
Confidence 344322111 234578888864322 22688888877 9999876 3789999877789999999999999
Q ss_pred HHHHhc
Q 015729 368 MILKDV 373 (401)
Q Consensus 368 ~~l~~~ 373 (401)
++++++
T Consensus 442 ~~l~~~ 447 (449)
T 3a8u_X 442 EVLNKL 447 (449)
T ss_dssp HHHHHC
T ss_pred HHHHHH
Confidence 998764
No 185
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.95 E-value=1.8e-25 Score=214.24 Aligned_cols=289 Identities=14% Similarity=0.094 Sum_probs=204.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH-H-HHHHHHcCCcEEEEeCCC
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL-W-IDQQQRLNFNVDVVESDW 117 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~-~-~~~~~~~g~~~~~v~~~~ 117 (401)
..+...++++.+++++|.+ + .+++++|++|++.++.+++++||+|+++.+.|++.. + ...++..|++++.++.+
T Consensus 112 ~~~~~~~l~~~lA~l~g~~--~-~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~- 187 (445)
T 1qgn_A 112 GNPTTVVLEEKISALEGAE--S-TLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPA- 187 (445)
T ss_dssp CCHHHHHHHHHHHHHHTCS--E-EEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSS-
T ss_pred CChHHHHHHHHHHHHhCCC--c-EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC-
Confidence 3467889999999999986 3 455566679999999988999999999999877654 2 22456789999999865
Q ss_pred CCCCChHHHHHHHhccCCCCc-eEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEE
Q 015729 118 GEGAKLDVLASKLAADTAHTI-KAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVAL 196 (401)
Q Consensus 118 ~~~~d~~~le~~~~~~~~~~~-~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~ 196 (401)
|++++++++++ ++ ++|++++++||+|.+.|+++|.++|++ +|+++|+|++|+.+... .....++|+++
T Consensus 188 ----d~~~l~~ai~~----~tv~lV~le~p~NptG~v~dl~~I~~la~~--~g~~livD~a~~~~~~~-~~~~~g~Div~ 256 (445)
T 1qgn_A 188 ----DVGALELALNQ----KKVNLFFTESPTNPFLRCVDIELVSKLCHE--KGALVCIDGTFATPLNQ-KALALGADLVL 256 (445)
T ss_dssp ----CHHHHHHHHHH----SCEEEEEEESSCTTTCCCCCHHHHHHHHHH--TTCEEEEECTTTCTTTC-CTTTTTCSEEE
T ss_pred ----CHHHHHHHhcc----CCCCEEEEeCCCCCCCcccCHHHHHHHHHH--cCCEEEEECCCcccccC-CccccCCEEEE
Confidence 89999999985 45 999999999999999999999999999 99999999999866432 33456899999
Q ss_pred ecCCCcccCCCc---ceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHH
Q 015729 197 TGSQKALSLPTG---MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLEN 273 (401)
Q Consensus 197 ~s~~K~l~g~~g---~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~ 273 (401)
+|.||+++ +.| +|++++++++++++... .. ..| .+++...++.+..+++. +..
T Consensus 257 ~S~sK~~g-g~gd~~~G~l~~~~~l~~~l~~~-------------~~-~~g----~~~~~~~a~~~~~~l~~-----l~~ 312 (445)
T 1qgn_A 257 HSATKFLG-GHNDVLAGCISGPLKLVSEIRNL-------------HH-ILG----GALNPNAAYLIIRGMKT-----LHL 312 (445)
T ss_dssp ECTTTTTT-CSSSCCCEEEEECHHHHHHHHHH-------------HH-HHC----CCCCHHHHHHHHHHGGG-----HHH
T ss_pred ECCccccc-ccccceEEEEEECHHHHHHHHHH-------------HH-HhC----CCCCHHHHHHHHHhHHH-----HHH
Confidence 99999986 444 79999999887765421 01 112 13444433333333332 344
Q ss_pred HHHHHHHHHHHHHHHHHHc-CC-ccccCC----Cc--------cCCceeEEEEcCCCC-CHHHHHHHHHhhCCeEEccCC
Q 015729 274 VIERHRRLGKATRLAVEAW-GL-KNCTQK----EE--------WFSDTVTAVIVPSHI-NSSEIVRRAWQRYNLSLGLGL 338 (401)
Q Consensus 274 ~~~~~~~~~~~l~~~L~~~-g~-~~~~~~----~~--------~~~~~~~~~~~~~~~-~~~~l~~~L~~~~~i~v~~g~ 338 (401)
..++..++++++.+.|++. ++ .+..+. +. ...+.+++|.++.+. +...+...|. .+++.+..|.
T Consensus 313 r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~~~~~l~~l~-~~~i~~s~G~ 391 (445)
T 1qgn_A 313 RVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDALK-IPYIAPSFGG 391 (445)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCS-SSEECSCCCS
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHHHHHHHHhCC-CceEeccCCC
Confidence 5666777888899999886 44 232221 00 124568889985321 1333444432 2356555553
Q ss_pred CC-----------------------CCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 339 NK-----------------------VAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 339 ~~-----------------------~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.+ ..++.+|||+. .||+|.+++.|+++++.
T Consensus 392 ~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG----~Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 392 CESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG----VEDFDDLKADILQALDS 444 (445)
T ss_dssp SSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC----SSCHHHHHHHHHHHHHH
T ss_pred CceeeecccccccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHhh
Confidence 21 12468999865 57899999999998864
No 186
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.95 E-value=1.9e-26 Score=216.17 Aligned_cols=321 Identities=12% Similarity=0.033 Sum_probs=210.8
Q ss_pred ccccCCCcCChHHHHHHHccCcC---CCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCC--
Q 015729 11 HLFVPGPVHIPDQVIRAMNRNNE---DYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGD-- 85 (401)
Q Consensus 11 ~~~~~~p~~~~~~v~~a~~~~~~---~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd-- 85 (401)
..++.|+.+..+++++++.+... ....+.......++++.+++++|.+. .++++||++|+..++.+++.+||
T Consensus 13 ~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~---~i~~~~G~~a~~~al~~~~~~gd~~ 89 (357)
T 3lws_A 13 TGQISGHGKRNVGVLKTAFAAVADEMASDQYGTGAIIEPFEQKFADVLGMDD---AVFFPSGTMAQQVALRIWSDETDNR 89 (357)
T ss_dssp SEESSBSSCCBHHHHHHHHTTSCTTCBCEETTEETTHHHHHHHHHHHHTCSE---EEEESCHHHHHHHHHHHHHHHHTCC
T ss_pred cccccCCCCCCHHHHHHHHHHhhcccCcccccCChHHHHHHHHHHHHhCCCc---EEEecCcHHHHHHHHHHHhhcCCCc
Confidence 33466666666666665554321 11112223567799999999999854 45568889999998888888888
Q ss_pred eEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCc-ccccc---hHHHH
Q 015729 86 RIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETAT-GVTNN---LSKVR 160 (401)
Q Consensus 86 ~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~t-G~~~~---l~~i~ 160 (401)
.|++..+.|++.. ........|++++.++. .++.+|+++++++. +++++++++|+||+ |.+.+ +++|.
T Consensus 90 ~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~d~~~l~~~~------~~~~v~~~~p~np~~G~~~~~~~l~~i~ 162 (357)
T 3lws_A 90 TVAYHPLCHLEIHEQDGLKELHPIETILVGA-ADRLMTLDEIKALP------DIACLLLELPQREIGGVAPAFSELETIS 162 (357)
T ss_dssp EEEECTTCHHHHSSTTHHHHHSSCEEEECSC-TTSCCCHHHHHTCC------SCSEEEEESSBGGGTSBCCCHHHHHHHH
T ss_pred EEEecccceeeeeccchhhhccCcEEEEecC-CCCCcCHHHHhcCc------CcceEEEEcccccCCceeCCHHHHHHHH
Confidence 5555555444432 12244556888888874 44578999998762 26899999999998 98885 78899
Q ss_pred HHhhhcCCCcEEEEecccccCcc-----e-eccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccch
Q 015729 161 KLLDEYRHPALFLVDGVSSICAI-----D-FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDW 234 (401)
Q Consensus 161 ~l~~~~~~~~~li~D~a~~~~~~-----~-~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~ 234 (401)
++|++ +|++||+|++|..+.. . .++. .+.|+++.|.||+++++.| |+++.++++++.+....
T Consensus 163 ~~~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~d~~~~s~sK~~~~~~g-g~~~~~~~~~~~~~~~~-------- 230 (357)
T 3lws_A 163 RYCRE--RGIRLHLDGARLFEMLPYYEKTAAEIA-GLFDSIYISFYKGLGGIAG-AILAGPAAFCQTARIWK-------- 230 (357)
T ss_dssp HHHHH--TTCEEEEEETTHHHHHHHHTCCHHHHH-TTSSEEEEESSSTTCCSSC-EEEEECHHHHHHHHHHH--------
T ss_pred HHHHH--cCCEEEEECchhhhhhhhcCCChHHHH-hcCCEEEEeccccCCCCce-EEEEcCHHHHHHHHHHH--------
Confidence 99999 9999999999762211 1 1111 3478889999999977777 99999998877664210
Q ss_pred HHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEc
Q 015729 235 KDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIV 313 (401)
Q Consensus 235 ~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~ 313 (401)
..+ .+. ..+.+... ++..++++.. .+..+++.++++++.+.|+++ |+++.... ....++++.+
T Consensus 231 ----~~~-~~~--~~~~~~~~-~~~~~~l~~~-----~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~---~~~~~~~~~~ 294 (357)
T 3lws_A 231 ----RRY-GGD--LISLYPYI-VSADYYYELR-----KDRMGQYYEQAKQLAEQFNALPGVHTTPEV---PVSNMFHLHF 294 (357)
T ss_dssp ----HHT-TCC--CSCCHHHH-HHHHHHHHHH-----TTCHHHHHHHHHHHHHHHHTSTTEEEESSS---CSSSEEEEEE
T ss_pred ----HHh-cCC--cccchHHH-HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhCCCCeeccCC---CcceEEEEEe
Confidence 001 111 11122222 2222344321 123344677788899999987 87763211 1224677777
Q ss_pred CCC--CCHHHHHHHHHhhCCeEEccCCCCCC-CcEEEEeecc---cCCHHHHHHHHHHHHHHH
Q 015729 314 PSH--INSSEIVRRAWQRYNLSLGLGLNKVA-GKVFRIGHLG---HLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 314 ~~~--~~~~~l~~~L~~~~~i~v~~g~~~~~-~~~~Ri~~~~---~~~~~di~~~~~~i~~~l 370 (401)
+.. .+..++.+.|.++ ||.++++..... ..++|++... ..+++++++++++|.+++
T Consensus 295 ~~~~~~~~~~~~~~l~~~-Gi~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 295 DGQAADISPKLEQVQEET-GLGFVGYLVDKDGYCSTEISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp ESCHHHHHHHHHHHHHHH-CEESCSCCEECSSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred cCChHHHHHHHHHHHHhc-CeEEecccccCCCceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 543 2256788888776 999998844322 2368997643 357899999999988764
No 187
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.94 E-value=3.5e-26 Score=222.31 Aligned_cols=304 Identities=13% Similarity=0.073 Sum_probs=204.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCC----CCCe---EEEEcCCcchHHHHHHHHHcCCcEEEE
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLS----PGDR---IISFLIGQFSLLWIDQQQRLNFNVDVV 113 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~----~gd~---vl~~~~~~~~~~~~~~~~~~g~~~~~v 113 (401)
.....++++.++++++.+ .+++++|||+|++.++.++++ +||+ |++. ..|++.. .......|.+++.+
T Consensus 75 ~~~~~~l~~~la~~~~~~---~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~-~~~~~~~-~~~~~~~g~~~~~~ 149 (467)
T 1ax4_A 75 SRNYYDLKDKAKELFNYD---YIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFIS-NFHFDTT-AAHVELNGCKAINI 149 (467)
T ss_dssp CHHHHHHHHHHHHHHCCC---EEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEE-SSCCHHH-HHHHHHTTCEEEEC
T ss_pred CccHHHHHHHHHHHcCCC---cEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEe-ccccchh-hHHHhccCCceecc
Confidence 356779999999999874 499999999999999988887 9998 8888 5565543 34456678888776
Q ss_pred eCC----------CCCCCChHHHHHHHhccCCCCceEEEEEecCCCc-ccccc---hHHHHHHhhhcCCCcEEEEecccc
Q 015729 114 ESD----------WGEGAKLDVLASKLAADTAHTIKAICIVHNETAT-GVTNN---LSKVRKLLDEYRHPALFLVDGVSS 179 (401)
Q Consensus 114 ~~~----------~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~t-G~~~~---l~~i~~l~~~~~~~~~li~D~a~~ 179 (401)
+.+ .++.+|+++|++++++....++++|++++++||+ |.+++ +++|.++|++ +|+++|+|+++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~--~gi~li~De~~~ 227 (467)
T 1ax4_A 150 VTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQ--HGIFVVMDSARF 227 (467)
T ss_dssp BCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHH--HTCCEEEECTTH
T ss_pred cccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHH--cCCEEEEEchhh
Confidence 542 1346899999999975211257999999999999 78765 6789999999 999999999876
Q ss_pred c-----------CcceeccCc------ccceEEEecCCCcccCCCcceEEEec-H-HHHHHhccCCCCccccchHHHHHH
Q 015729 180 I-----------CAIDFRMDE------WGIDVALTGSQKALSLPTGMGIVCAS-P-KALEASKTAKSVRVFFDWKDYIKF 240 (401)
Q Consensus 180 ~-----------~~~~~~~~~------~~~di~~~s~~K~l~g~~g~G~l~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
+ +....+... ..+|++++|.||+++.+.| |+++.+ + ++.+.+.... ..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~d~~~l~~~~~~~~------------~~ 294 (467)
T 1ax4_A 228 CENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIG-GLVAIRDNEEIFTLARQRC------------VP 294 (467)
T ss_dssp HHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSSC-EEEEESSCHHHHHHHHHHH------------HH
T ss_pred hhcchhccccccccCCCchhhhhhhhccccceEEEeccccCCCCcc-eEEEeCCHHHHHHHHHhhc------------cc
Confidence 5 111111111 2368889999999854435 777777 6 6666543210 00
Q ss_pred hhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEE-------c
Q 015729 241 YNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVI-------V 313 (401)
Q Consensus 241 ~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-------~ 313 (401)
+ .+....++.+...+.++..+++...+ +...++..++.+++.+.|++.|+++..+. .+.++++. +
T Consensus 295 ~-~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 366 (467)
T 1ax4_A 295 M-EGFVTYGGLAGRDMAAMVQGLEEGTE---EEYLHYRIGQVKYLGDRLREAGIPIQYPT----GGHAVFVDCKKLVPQI 366 (467)
T ss_dssp H-TCSTTTTTCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHHTTCCBCSSC----CSSEEEEESTTTCTTS
T ss_pred c-ccccccCCccchHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHhCCCCcccCC----CceEEEEehhhhcccc
Confidence 1 11111223444333334334443221 22344445777889999988777765432 23466677 3
Q ss_pred CC-CCCHHHHHHHH-HhhCCeEEcc-CCC---C---------CCCcEEEEeecc-cCCHHHHHHHHHHHHHHHHhc
Q 015729 314 PS-HINSSEIVRRA-WQRYNLSLGL-GLN---K---------VAGKVFRIGHLG-HLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 314 ~~-~~~~~~l~~~L-~~~~~i~v~~-g~~---~---------~~~~~~Ri~~~~-~~~~~di~~~~~~i~~~l~~~ 373 (401)
+. +.+..++++.| .++ ||.+.+ |.. . ...+++||++.. .+|++|+++++++|++++++.
T Consensus 367 ~~~~~~~~~l~~~L~~~~-gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~ 441 (467)
T 1ax4_A 367 PGDQFPAQAVINALYLES-GVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKF 441 (467)
T ss_dssp CGGGCHHHHHHHHHHHHH-CEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHH
T ss_pred ccCCCCHHHHHHHHHHhc-CceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHhh
Confidence 21 23567899998 555 999987 421 0 013689998874 489999999999999988764
No 188
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.94 E-value=1.6e-25 Score=216.68 Aligned_cols=326 Identities=11% Similarity=0.067 Sum_probs=216.7
Q ss_pred hHHHHHHHccCcCC---CCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC-----C---CCCeEEE
Q 015729 21 PDQVIRAMNRNNED---YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL-----S---PGDRIIS 89 (401)
Q Consensus 21 ~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~-----~---~gd~vl~ 89 (401)
+|++++++.+.... .......+...++++.++++++.+.. +++++||++|++.++.... . ++++|++
T Consensus 67 ~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~--v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~ 144 (452)
T 3n5m_A 67 RKELAEAAYKQLQTLSYFPMSQSHEPAIKLAEKLNEWLGGEYV--IFFSNSGSEANETAFKIARQYYAQKGEPHRYKFMS 144 (452)
T ss_dssp CHHHHHHHHHHHTTCCCCCTTSEEHHHHHHHHHHHHHHTSCEE--EEEESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEE
T ss_pred CHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHHhCCCCce--EEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 56666666654322 11223456778999999999886543 9999999999999987755 4 7899999
Q ss_pred EcCCcchHHHHHHHHHcCC------------cEEEEeCCCCCCC---C---------hHHHHHHHhccCCCCceEEEEEe
Q 015729 90 FLIGQFSLLWIDQQQRLNF------------NVDVVESDWGEGA---K---------LDVLASKLAADTAHTIKAICIVH 145 (401)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~~~---d---------~~~le~~~~~~~~~~~~~i~~~~ 145 (401)
.+++|++........ .+. ....++....... | +++||+++++...+++++|+++.
T Consensus 145 ~~~~yhg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~ep 223 (452)
T 3n5m_A 145 RYRGYHGNTMATMAA-TGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWELSETIAAFIMEP 223 (452)
T ss_dssp ETTCCCCSSHHHHHS-CCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHCGGGEEEEEECS
T ss_pred ECCCcCCCCHHHHhc-CCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcCCCCEEEEEEcc
Confidence 999988765322211 111 2344443221111 2 78999998721113578888888
Q ss_pred c-CCCcccccc----hHHHHHHhhhcCCCcEEEEecccccC-cc--e--eccCcccceEEEecCCCcccCC-CcceEEEe
Q 015729 146 N-ETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSIC-AI--D--FRMDEWGIDVALTGSQKALSLP-TGMGIVCA 214 (401)
Q Consensus 146 ~-~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~-~~--~--~~~~~~~~di~~~s~~K~l~g~-~g~G~l~~ 214 (401)
+ +| +|.+.+ +++|.++|++ +|+++|+|++|+.. .. . .+.....+|++++| |+++++ .++|++++
T Consensus 224 ~~~n-~G~~~~~~~~l~~l~~l~~~--~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t~s--K~l~~G~~~ig~~~~ 298 (452)
T 3n5m_A 224 IITG-GGILMAPQDYMKAVHETCQK--HGALLISDEVICGFGRTGKAFGFMNYDVKPDIITMA--KGITSAYLPLSATAV 298 (452)
T ss_dssp SBTT-TTCBCCCTTHHHHHHHHHHH--HTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEEC--GGGGTTSSCCEEEEE
T ss_pred ccCC-CCeeeCCHHHHHHHHHHHHH--cCCEEEEecchhCCCcccccchhhhcCCCCCEEeec--ccccCCCcceEEEEE
Confidence 8 89 998886 8999999999 99999999998732 11 1 22223346777665 888766 67899999
Q ss_pred cHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--
Q 015729 215 SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-- 292 (401)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-- 292 (401)
++++.+.+........ +..+ .+++.++..+++..++++.+.++ ...++.+++.+++++.|+++
T Consensus 299 ~~~i~~~~~~~~~~~~----------~~~~--~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~~~~ 363 (452)
T 3n5m_A 299 KREIYEAFKGKGEYEF----------FRHI--NTFGGNPAACALALKNLEIIENE---NLIERSAQMGSLLLEQLKEEIG 363 (452)
T ss_dssp EHHHHGGGCSSSTTCS----------CCCC--CSSTTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHhhccCCCC----------cccc--CCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHh
Confidence 9999887753100000 0001 13456677777888888877654 35667777778888888764
Q ss_pred CCccccCCCccCCceeEEEEcCCCCC---------HHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHH
Q 015729 293 GLKNCTQKEEWFSDTVTAVIVPSHIN---------SSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLG 361 (401)
Q Consensus 293 g~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~ 361 (401)
.+....... ..+.++++.+.+... ..++++.|.++ ||.+.++..+ ..++++||++....|++|+++
T Consensus 364 ~~~~~~~~~--~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~ 440 (452)
T 3n5m_A 364 EHPLVGDIR--GKGLLVGIELVNDKETKEPIDNDKIASVVNACKEK-GLIIGRNGMTTAGYNNILTLAPPLVISSEEIAF 440 (452)
T ss_dssp TCTTEEEEE--ESSSCEEEEEEEETTTTEECCHHHHHHHHHHHHHT-TEECEECTTSSTTCCCEEEECCCTTCCHHHHHH
T ss_pred cCCCeEEEE--EEEEEEEEEEecCCcccCCCCHHHHHHHHHHHHHC-CcEEeecCcccCCCCCEEEEECCCCCCHHHHHH
Confidence 333222111 233455565521110 24688888876 9999887532 235789998888889999999
Q ss_pred HHHHHHHHHHh
Q 015729 362 CLAGVEMILKD 372 (401)
Q Consensus 362 ~~~~i~~~l~~ 372 (401)
++++|++++++
T Consensus 441 ~l~~l~~~l~~ 451 (452)
T 3n5m_A 441 VIGTLKTAMER 451 (452)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHh
Confidence 99999998864
No 189
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.94 E-value=1.1e-25 Score=226.74 Aligned_cols=310 Identities=8% Similarity=0.010 Sum_probs=226.4
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCC---
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG--- 118 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--- 118 (401)
....++++.+++++|.+. .+++++|+++|+..++.+++++||+|++..++|.+... ..++..|++++.++.+.+
T Consensus 173 ~~i~e~e~~lA~~~gae~--~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~-~~~~l~Ga~~v~v~~~~~~~~ 249 (730)
T 1c4k_A 173 GPAVAAEKHAARVYNADK--TYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYN-SALAMAGGRPVYLQTNRNPYG 249 (730)
T ss_dssp THHHHHHHHHHHHTTCSE--EEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHH-HHTTTTCCEEEEECEEECTTC
T ss_pred HHHHHHHHHHHHHHCCCc--EEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHH-HHHHHCCCEEEEEeCCccccC
Confidence 457899999999999875 36778888899999999999999999999999888763 226678999988876432
Q ss_pred --CCCChHHH-----HHHHhcc-C----CCCc-eEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcc--
Q 015729 119 --EGAKLDVL-----ASKLAAD-T----AHTI-KAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAI-- 183 (401)
Q Consensus 119 --~~~d~~~l-----e~~~~~~-~----~~~~-~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~-- 183 (401)
+.+|++++ +++++++ + ..++ ++++++++ |++|.+.|+++|.++|++ +|+++|+|++|+.+..
T Consensus 250 i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~--~g~~livDeAh~~~~~f~ 326 (730)
T 1c4k_A 250 FIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGH--LCDYIEFDSAWVGYEQFI 326 (730)
T ss_dssp CEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGG--GBSEEEEECTTCCGGGSS
T ss_pred ccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHH--cCCeEEEEcccccccccC
Confidence 33688888 8888753 1 0123 88999987 689999999999999999 9999999999974311
Q ss_pred -------eeccCcccce----EEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHH---HHHHhhcCCCCCC
Q 015729 184 -------DFRMDEWGID----VALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKD---YIKFYNLGTFWPY 249 (401)
Q Consensus 184 -------~~~~~~~~~d----i~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~ 249 (401)
+++.+..++| ++++|.||+++|+.+.|+++++++.+. . ...+.+... ....+. ..
T Consensus 327 ~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~---g---~~~~i~~~~~~~~~~~~~-----st 395 (730)
T 1c4k_A 327 PMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIK---G---QLRYCDHKHFNNSFNLFM-----ST 395 (730)
T ss_dssp GGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGT---T---STTCCCHHHHHHHHHHHS-----CS
T ss_pred cccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhhc---C---cccccCHHHHHHHHHHhC-----CC
Confidence 1222233677 999999999987777788888776431 1 011122111 112222 33
Q ss_pred CCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH-c-CCccccCCC--------------------------
Q 015729 250 TPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEA-W-GLKNCTQKE-------------------------- 301 (401)
Q Consensus 250 ~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~-------------------------- 301 (401)
+++...++++.+|++.+..++.+...++..++.+++++.|++ + |+++..+..
T Consensus 396 sp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (730)
T 1c4k_A 396 SPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKG 475 (730)
T ss_dssp SCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTT
T ss_pred CCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCcc
Confidence 588888889999998877633356778899999999999998 4 887755321
Q ss_pred ------c-c-C-----CceeEEEEcCC-----------CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHH
Q 015729 302 ------E-W-F-----SDTVTAVIVPS-----------HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEL 357 (401)
Q Consensus 302 ------~-~-~-----~~~~~~~~~~~-----------~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~ 357 (401)
. . . .++.+.+..|. ++++.++.+.|.++ ||.+... ....+|+++...+|++
T Consensus 476 ~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~-GI~v~~~----~~~~ir~~~s~g~t~e 550 (730)
T 1c4k_A 476 AKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDH-GIIPEKS----DLNSILFLMTPAETPA 550 (730)
T ss_dssp CTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHT-TCCCSEE----CSSEEEEECCTTCCHH
T ss_pred chhccccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHC-CcEEEEC----CCCeEEEEeCCCCCHH
Confidence 0 0 0 11224566642 46788999999877 9887543 2457899888889999
Q ss_pred HHHHHHHHHHHHHHhc
Q 015729 358 QLLGCLAGVEMILKDV 373 (401)
Q Consensus 358 di~~~~~~i~~~l~~~ 373 (401)
|+++++++|+++.++.
T Consensus 551 ~i~~Ll~aL~~i~~~~ 566 (730)
T 1c4k_A 551 KMNNLITQLLQLQRLI 566 (730)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999987755
No 190
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.94 E-value=3.3e-25 Score=214.90 Aligned_cols=328 Identities=16% Similarity=0.091 Sum_probs=214.7
Q ss_pred hHHHHHHHccCcC----CCC-CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC--------CCCCeE
Q 015729 21 PDQVIRAMNRNNE----DYR-SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL--------SPGDRI 87 (401)
Q Consensus 21 ~~~v~~a~~~~~~----~~~-~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~--------~~gd~v 87 (401)
++.+++++.+... .+. .....+...++.++++++++... +++++++||++|++.++.... .++++|
T Consensus 69 ~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~-~~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~v 147 (460)
T 3gju_A 69 RQKIADAIATQAKNLAYYHAYVGHGTEASITLAKMIIDRAPKGM-SRVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKI 147 (460)
T ss_dssp CHHHHHHHHHHHHHHSCCCCCTTCCCHHHHHHHHHHHHHSCTTE-EEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEE
T ss_pred CHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHhhCCCCc-CEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEE
Confidence 4666666655321 111 12234567789999999876544 459999999999999987755 356899
Q ss_pred EEEcCCcchHHHHHHHHH-----------cCCcEEEEeCCCCC-----CCC--------hHHHHHHHhccCCCCceEEEE
Q 015729 88 ISFLIGQFSLLWIDQQQR-----------LNFNVDVVESDWGE-----GAK--------LDVLASKLAADTAHTIKAICI 143 (401)
Q Consensus 88 l~~~~~~~~~~~~~~~~~-----------~g~~~~~v~~~~~~-----~~d--------~~~le~~~~~~~~~~~~~i~~ 143 (401)
++.+++||+......... ....+..++.+... ..+ +++|++++++...+++++|++
T Consensus 148 i~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~aaii~ 227 (460)
T 3gju_A 148 ISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGPETIAAFIG 227 (460)
T ss_dssp EEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEE
T ss_pred EEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999999887663222110 11245566643311 123 588999887422135788888
Q ss_pred EecCCCcccccc----hHHHHHHhhhcCCCcEEEEecccc-cCcc--ee--ccCcccceEEEecCCCcccCC-CcceEEE
Q 015729 144 VHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSS-ICAI--DF--RMDEWGIDVALTGSQKALSLP-TGMGIVC 213 (401)
Q Consensus 144 ~~~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~-~~~~--~~--~~~~~~~di~~~s~~K~l~g~-~g~G~l~ 213 (401)
+.+++++|.+.+ +++|.++|++ +|+++|+|++|+ +|.. .+ +.....+|++++| |+++++ .++|+++
T Consensus 228 ep~~~~~G~~~~~~~~l~~l~~l~~~--~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s--K~l~gG~~~lg~v~ 303 (460)
T 3gju_A 228 EPILGTGGIVPPPAGYWEKIQAVLKK--YDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLITIA--KGLTSAYAPLSGVI 303 (460)
T ss_dssp CSSBSTTTSBCCCTTHHHHHHHHHHH--TTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEEC--GGGTTTSSCCEEEE
T ss_pred CCccCCCCCccCCHHHHHHHHHHHHH--cCCEEEEeccccCCCcccccchHhhcCCCCCeeeee--hhhcCCCCCeEEEE
Confidence 888888998765 8999999999 999999999988 3211 11 2122346777765 999765 5789999
Q ss_pred ecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-
Q 015729 214 ASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW- 292 (401)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~- 292 (401)
+++++.+.+.... .....+..+ .+++.++..+++..++++.+..++ ..++.+++.+++++.|.+.
T Consensus 304 ~~~~i~~~~~~~~---------~~~~~~~~~--~t~~~~~~~~aaa~aal~~~~~~~---~~~~~~~~~~~~~~~l~~~l 369 (460)
T 3gju_A 304 VADRVWQVLVQGS---------DKLGSLGHG--WTYSAHPICVAAGVANLELIDEMD---LVTNAGETGAYFRAELAKAV 369 (460)
T ss_dssp EEHHHHHHHHHHH---------HHHCSCSCC--CTTTTCHHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHH
T ss_pred ECHHHHHHHhccc---------ccccccccC--CCCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHH
Confidence 9999888774210 000000111 234566777788888888776643 4556666666666666442
Q ss_pred -CCccccCCCccCCceeEEEEcCCCCC-----------HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHH
Q 015729 293 -GLKNCTQKEEWFSDTVTAVIVPSHIN-----------SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLL 360 (401)
Q Consensus 293 -g~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~ 360 (401)
......... ..+.++++.+++... ..++.+.|.++ ||.++++. .++++||++....|++|++
T Consensus 370 ~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~---~~~~iRi~~~~~~t~e~i~ 443 (460)
T 3gju_A 370 GGHKNVGEVR--GDGMLAAVEFVADKDDRVFFDASQKIGPQVATALAAS-GVIGRAMP---QGDILGFAPPLCLTREQAD 443 (460)
T ss_dssp TTSTTEEEEE--EETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHT-TEECEECS---SSCEEEECCCTTCCHHHHH
T ss_pred hcCCCeEEEe--eeeEEEEEEEccCccccccccchHHHHHHHHHHHHHC-CeEEecCC---CCCEEEEECCCCCCHHHHH
Confidence 232221111 223466677643211 45788888877 99988764 2578999887788999999
Q ss_pred HHHHHHHHHHHhc
Q 015729 361 GCLAGVEMILKDV 373 (401)
Q Consensus 361 ~~~~~i~~~l~~~ 373 (401)
+++++|+++++++
T Consensus 444 ~~l~~l~~~l~~~ 456 (460)
T 3gju_A 444 IVVSKTADAVKSV 456 (460)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998764
No 191
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.94 E-value=1.6e-25 Score=214.45 Aligned_cols=312 Identities=13% Similarity=0.037 Sum_probs=211.1
Q ss_pred hHHHHHHHccCcCC--CCC--ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCC-CCCeEEEEcCCcc
Q 015729 21 PDQVIRAMNRNNED--YRS--PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLS-PGDRIISFLIGQF 95 (401)
Q Consensus 21 ~~~v~~a~~~~~~~--~~~--~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~-~gd~vl~~~~~~~ 95 (401)
++.+++++.+.... +.+ ....+...++++.+++++|.+.++++++++|+++|++.++..... +||+|+++++.|+
T Consensus 61 ~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~~~ai~~~~~~~~~~vi~~~p~yh 140 (419)
T 2eo5_A 61 HPEVIKIGIEQMQKLAHAAANDFYNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIEASIKVVKNTGRKYIIAFLGGFH 140 (419)
T ss_dssp CHHHHHHHHHHHTTSCCCSCSCSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHTTSCCEEEEETTCCC
T ss_pred CHHHHHHHHHHHhhCccccccccCCHHHHHHHHHHHHhCCCCcCCEEEEeCchHHHHHHHHHHHHHhhCCcEEEECCCcC
Confidence 67788877764322 111 123355678999999999986334699999999999998865332 3899999999887
Q ss_pred hHHHHHHHH-------Hc-----CCcEEEEeCCCCCC----------------CChHHHH-HHHhccCC-CCceEEEEEe
Q 015729 96 SLLWIDQQQ-------RL-----NFNVDVVESDWGEG----------------AKLDVLA-SKLAADTA-HTIKAICIVH 145 (401)
Q Consensus 96 ~~~~~~~~~-------~~-----g~~~~~v~~~~~~~----------------~d~~~le-~~~~~~~~-~~~~~i~~~~ 145 (401)
+........ .. ..+++.++.+.+.. +|+++++ +++++... ++++++++++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p 220 (419)
T 2eo5_A 141 GRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLVPPEEVAGIFFEP 220 (419)
T ss_dssp CSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTCCGGGEEEEEECS
T ss_pred CCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhccCCCCEEEEEEeC
Confidence 654221110 11 13677777754422 3578999 88874210 1456677666
Q ss_pred cCCCcccccc----hHHHHHHhhhcCCCcEEEEecccc-cCcc--e--eccCcccceEEEecCCCcccCC-CcceEEEec
Q 015729 146 NETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSS-ICAI--D--FRMDEWGIDVALTGSQKALSLP-TGMGIVCAS 215 (401)
Q Consensus 146 ~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~-~~~~--~--~~~~~~~~di~~~s~~K~l~g~-~g~G~l~~~ 215 (401)
++|++|.+.+ +++|.++|++ +|+++|+|++|+ ++.. . ++.....+|++++ +|+++++ .++|+++++
T Consensus 221 ~~~~tG~~~~~~~~l~~l~~l~~~--~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~t~--sK~~~~G~~riG~~~~~ 296 (419)
T 2eo5_A 221 IQGEGGYVIPPKNFFAELQKLAKK--YGILLVDDEVQMGLGRTGKLFAIENFNTVPDVITL--AKALGGGIMPIGATIFR 296 (419)
T ss_dssp SBTTTTSBCCCTTHHHHHHHHHHH--HTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEE--CGGGGTTTSCCEEEEEE
T ss_pred ccCCCCCccCCHHHHHHHHHHHHH--cCCEEEEeccccCCccCcchhhHHhcCCCCCEEEe--cccccCCccceEEEEEc
Confidence 6678998765 8999999999 999999999997 3321 1 1222335677654 5999876 778999999
Q ss_pred HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCc
Q 015729 216 PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLK 295 (401)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~ 295 (401)
+++. .+ ... . + .+++.+...++++.++++...+ ..++++++++++.+.|+++ +.
T Consensus 297 ~~~~-~~-~~~---------------~-~--~t~~~n~~~~~aa~aal~~~~~-----~~~~~~~~~~~l~~~L~~~-~~ 350 (419)
T 2eo5_A 297 KDLD-FK-PGM---------------H-S--NTFGGNALACAIGSKVIDIVKD-----LLPHVNEIGKIFAEELQGL-AD 350 (419)
T ss_dssp GGGC-CC-------------------------CCCCCHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHTTS-SS
T ss_pred hHhh-cC-Ccc---------------c-C--CCCCCCHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHh-hh
Confidence 8865 43 100 0 1 1334567777777888876432 6778888899999998775 22
Q ss_pred cccCCCccCCceeEEEEc-CCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 296 NCTQKEEWFSDTVTAVIV-PSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
... ..+.++++.+ ++..... +.+.|.++ ||.+.++. ++++||++....+++|+++++++|+++++++
T Consensus 351 ~~~-----~~g~~~~i~~~~~~~~~~-~~~~l~~~-Gv~v~~~~----~~~lRis~~~~~t~e~i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 351 DVR-----GIGLAWGLEYNEKKVRDR-IIGESFKR-GLLLLPAG----RSAIRVIPPLVISEEEAKQGLDILKKVIKVV 418 (419)
T ss_dssp EEE-----EETTEEEEECSCHHHHHH-HHHHHHHT-TEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred heE-----eeeEEEEEEEecCccHHH-HHHHHHHC-CCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 221 1234666777 3211245 88888765 99998763 5689998776789999999999999998764
No 192
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.94 E-value=4.4e-26 Score=219.40 Aligned_cols=326 Identities=12% Similarity=0.081 Sum_probs=217.6
Q ss_pred hHHHHHHHccCcCC--CCC-ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC--CCCCeEEEEcCCcc
Q 015729 21 PDQVIRAMNRNNED--YRS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL--SPGDRIISFLIGQF 95 (401)
Q Consensus 21 ~~~v~~a~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~--~~gd~vl~~~~~~~ 95 (401)
++++++++.+.... +.. ....+...++++.++++++.+. +++++++||++|++.++.... ..+++|++.+++||
T Consensus 61 ~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~v~~~~gg~ea~~~a~~~~~~~~~~~~vi~~~~~yh 139 (433)
T 1zod_A 61 HPEIVSVIGEYAGKLDHLFSEMLSRPVVDLATRLANITPPGL-DRALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWH 139 (433)
T ss_dssp CHHHHHHHHHHHHHCCCCCTTCCCHHHHHHHHHHHHHSCTTC-CEEEEESCHHHHHHHHHHHHHHHHTCCEEEEETTCCC
T ss_pred CHHHHHHHHHHHHhCcccccccCCHHHHHHHHHHHHhCCCCc-CEEEEeCchHHHHHHHHHHHHHhhCCCeEEEECCCcC
Confidence 67777777664321 111 1123566789999999998754 459999999999999986532 34679999999888
Q ss_pred hHHHHHHHHH----------cCCcEEEEeCCCCC------------CCChHHHHHHHhccCCCCceEEEEEecCCCcccc
Q 015729 96 SLLWIDQQQR----------LNFNVDVVESDWGE------------GAKLDVLASKLAADTAHTIKAICIVHNETATGVT 153 (401)
Q Consensus 96 ~~~~~~~~~~----------~g~~~~~v~~~~~~------------~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~ 153 (401)
+......... ....+..++.+... .+|++++++++++...+++++++++.++|++|.+
T Consensus 140 g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~ 219 (433)
T 1zod_A 140 GMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGII 219 (433)
T ss_dssp CSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEEECSEETTTTCE
T ss_pred CCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEEEEEccccCCCCcc
Confidence 7653222110 01244555543211 1358999999874211256777777667889987
Q ss_pred cc----hHHHHHHhhhcCCCcEEEEecccc-cCcc--e--eccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhcc
Q 015729 154 NN----LSKVRKLLDEYRHPALFLVDGVSS-ICAI--D--FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKT 224 (401)
Q Consensus 154 ~~----l~~i~~l~~~~~~~~~li~D~a~~-~~~~--~--~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~ 224 (401)
.+ +++|.++|++ +|+++|+|++|+ ++.. . ++.....+|++++ +|+++++.++|++++++++.+.+..
T Consensus 220 ~~~~~~l~~l~~l~~~--~~~~li~DEv~~~~g~~g~~~~~~~~~~~~di~s~--sK~~~~G~~ig~~~~~~~~~~~~~~ 295 (433)
T 1zod_A 220 ELPDGYMAALKRKCEA--RGMLLILDEAQTGVGRTGTMFACQRDGVTPDILTL--SKTLGAGLPLAAIVTSAAIEERAHE 295 (433)
T ss_dssp ECCTTHHHHHHHHHHH--HTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEE--CHHHHTTSSCEEEEECHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHH--hCCEEEEeccccCCCcCchHhHHhhcCCCCCEEEe--cccccCCCCeeEEEEhHHHHHhhcc
Confidence 65 8999999999 999999999998 4311 1 1212234676654 5999876678999999998777654
Q ss_pred CCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCc
Q 015729 225 AKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEE 302 (401)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~ 302 (401)
... .....++.++..++++.++++.+.+.+ ..++..++.+++++.|+++ .+.......
T Consensus 296 ~~~----------------~~~~t~~~~~~~~~a~~aal~~~~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~- 355 (433)
T 1zod_A 296 LGY----------------LFYTTHVSDPLPAAVGLRVLDVVQRDG---LVARANVMGDRLRRGLLDLMERFDCIGDVR- 355 (433)
T ss_dssp TTC----------------CCCCTTTTCHHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHHCTTEEEEE-
T ss_pred CCC----------------CCCCCCCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHhCCCeEEEE-
Confidence 210 000133456777778888888776643 5667777888888888774 233221111
Q ss_pred cCCceeEEEEcCCC--------CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 303 WFSDTVTAVIVPSH--------INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 303 ~~~~~~~~~~~~~~--------~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
..+.++++.+++. .+..++.+.|.++ ||.+.++.....++++||++....+++|+++++++|+++++++
T Consensus 356 -~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~~~ 432 (433)
T 1zod_A 356 -GRGLLLGVEIVKDRRTKEPADGLGAKITRECMNL-GLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIERA 432 (433)
T ss_dssp -EETTEEEEEEEEETTTTEECTTHHHHHHHHHHHT-TEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred -EEEEEEEEEEecCccccCCChHHHHHHHHHHHHC-CCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHHHHHHHh
Confidence 1234667776431 2356788888865 9999887542223789998777789999999999999988753
No 193
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.94 E-value=4.1e-25 Score=210.58 Aligned_cols=288 Identities=15% Similarity=0.113 Sum_probs=201.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCC
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDW 117 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~ 117 (401)
..+...++++.+++++|.+. +++++||++|+..++.+++++||+|+++.+.|++.. +...+...|++++.++.+
T Consensus 79 ~~p~~~~l~~~la~~~g~~~---~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~- 154 (414)
T 3ndn_A 79 GNPTVSVFEERLRLIEGAPA---AFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD- 154 (414)
T ss_dssp CCHHHHHHHHHHHHHHTCSE---EEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-
T ss_pred CChHHHHHHHHHHHHHCCCc---EEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC-
Confidence 34678899999999998743 788999999999999999999999999999888765 333456689999999876
Q ss_pred CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEe
Q 015729 118 GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALT 197 (401)
Q Consensus 118 ~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~ 197 (401)
|++++++++++ ++++|++++++||+|.+.|+++|.++|++ +|+++|+|++++.+... .....++|+++.
T Consensus 155 ----d~~~l~~ai~~----~t~~v~le~p~NptG~~~~l~~i~~la~~--~g~~livDe~~~~~~~~-~~~~~g~div~~ 223 (414)
T 3ndn_A 155 ----DLSQWERALSV----PTQAVFFETPSNPMQSLVDIAAVTELAHA--AGAKVVLDNVFATPLLQ-QGFPLGVDVVVY 223 (414)
T ss_dssp ----CHHHHHHHTSS----CCSEEEEESSCTTTCCCCCHHHHHHHHHH--TTCEEEEECTTTHHHHC-CCGGGTCSEEEE
T ss_pred ----CHHHHHHhcCC----CCeEEEEECCCCCCCccccHHHHHHHHHH--cCCEEEEECCCcccccC-CchhcCCCeEec
Confidence 89999999974 56999999999999999999999999999 99999999999865432 223567899999
Q ss_pred cCCCcccCCC--cceEEEecHHHHH-HhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHH
Q 015729 198 GSQKALSLPT--GMGIVCASPKALE-ASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENV 274 (401)
Q Consensus 198 s~~K~l~g~~--g~G~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~ 274 (401)
|.+|++++.. .+|+++++++.+. .+... ...+ | .+.+....+.+...+ ..+...
T Consensus 224 S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~------------~~~~--g----~~~~~~~a~~~~~~l-----~~l~~r 280 (414)
T 3ndn_A 224 SGTKHIDGQGRVLGGAILGDREYIDGPVQKL------------MRHT--G----PAMSAFNAWVLLKGL-----ETLAIR 280 (414)
T ss_dssp ETTTTTTCSSCCCCEEEEECHHHHTTHHHHH------------HHHH--C----CCCCHHHHHHHHHHG-----GGHHHH
T ss_pred cCCccccCCCCceEEEEEECHHHHHHHHHHH------------HHHc--C----CCCCHHHHHHHHHHH-----HHHHHH
Confidence 9999995422 2699999988654 33211 0111 2 124443222222222 234567
Q ss_pred HHHHHHHHHHHHHHHHHc-CCccc-cCC-Cc-----------cCCceeEEEEcCCC-----CCHHHHHHHHHhhCCeEEc
Q 015729 275 IERHRRLGKATRLAVEAW-GLKNC-TQK-EE-----------WFSDTVTAVIVPSH-----INSSEIVRRAWQRYNLSLG 335 (401)
Q Consensus 275 ~~~~~~~~~~l~~~L~~~-g~~~~-~~~-~~-----------~~~~~~~~~~~~~~-----~~~~~l~~~L~~~~~i~v~ 335 (401)
.++..++++.+.+.|++. ++... .+. +. ...+.+++|.++.+ .+..++.+.|. .+++.+.
T Consensus 281 ~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l~-~~~~~~s 359 (414)
T 3ndn_A 281 VQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKMR-LIDISNN 359 (414)
T ss_dssp HHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHCS-SSEECSC
T ss_pred HHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhCc-cceEcCC
Confidence 778888899999999875 33211 111 00 12356889999532 12344555553 3355555
Q ss_pred cCCC-----------------------CCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 336 LGLN-----------------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 336 ~g~~-----------------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
.|.. ...++.+|+|+. .|+++.+++.|+.+|
T Consensus 360 ~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG----~e~~~dli~dl~~al 413 (414)
T 3ndn_A 360 LGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVG----LEDTDDLIADIDRAL 413 (414)
T ss_dssp CSCSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECC----SSCHHHHHHHHHHHH
T ss_pred CCCCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeC----cCCHHHHHHHHHHhh
Confidence 4421 123567999864 466777777777665
No 194
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.94 E-value=7.6e-25 Score=208.58 Aligned_cols=293 Identities=11% Similarity=0.091 Sum_probs=200.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCC
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDW 117 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~ 117 (401)
......++++.+++++|.+. .++++||++|++.++.+++++||+|+++.+.|++.. +...++..|++++.++.+
T Consensus 80 ~~p~~~~le~~lA~l~g~~~---~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~- 155 (415)
T 2fq6_A 80 GTLTHFSLQQAMCELEGGAG---CVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPL- 155 (415)
T ss_dssp CCHHHHHHHHHHHHHHTCSE---EEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTT-
T ss_pred CCchHHHHHHHHHHHhCCCe---EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCC-
Confidence 34667899999999999753 566789999999999999999999999999888765 323456679999998754
Q ss_pred CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEe
Q 015729 118 GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALT 197 (401)
Q Consensus 118 ~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~ 197 (401)
|++++++++++ ++++|++++++||+|.+.|+++|.++|++.++|+++|+|++|+.+..... ...++|++++
T Consensus 156 ----d~~~le~ai~~----~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~p-~~~g~Div~~ 226 (415)
T 2fq6_A 156 ----IGADIVKHLQP----NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKA-LDFGIDVSIQ 226 (415)
T ss_dssp ----CGGGGGGGCCT----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSCG-GGGTCSEEEE
T ss_pred ----CHHHHHHhhcc----CCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccCCc-cccCCeEEEE
Confidence 79999998874 57999999999999999999999999998557899999999986532111 2467999999
Q ss_pred cCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHH
Q 015729 198 GSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVI 275 (401)
Q Consensus 198 s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~ 275 (401)
|.||+++++.+ .|+++.+++.++++... ... .|. +.+....+.+..+++. +....
T Consensus 227 S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~------------~~~--~G~----~~~~~~a~~~~~~l~~-----l~~r~ 283 (415)
T 2fq6_A 227 AATKYLVGHSDAMIGTAVCNARCWEQLREN------------AYL--MGQ----MVDADTAYITSRGLRT-----LGVRL 283 (415)
T ss_dssp ETTTTTTCSSSCCCEEEEECTTTHHHHHHH------------HHH--TTC----CCCHHHHHHHHHHHHH-----HHHHH
T ss_pred eCccccCCCCCceEEEEEeCHHHHHHHHHH------------HHh--cCC----CCCHHHHHHHHhhhhH-----HHHHH
Confidence 99999965432 59999988766655421 011 121 2344323323333332 34566
Q ss_pred HHHHHHHHHHHHHHHHc-CCc-cccC----CCc--------cCCceeEEEEcCCCCCHHHHHHHHHh--hCCeEEccCCC
Q 015729 276 ERHRRLGKATRLAVEAW-GLK-NCTQ----KEE--------WFSDTVTAVIVPSHINSSEIVRRAWQ--RYNLSLGLGLN 339 (401)
Q Consensus 276 ~~~~~~~~~l~~~L~~~-g~~-~~~~----~~~--------~~~~~~~~~~~~~~~~~~~l~~~L~~--~~~i~v~~g~~ 339 (401)
++..++.+.+.+.|++. .+. +..+ .+. ...+.+++|.++.+.+..+....+.. .+++.++.|..
T Consensus 284 ~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~~~~~~l~~l~~~~~a~s~G~~ 363 (415)
T 2fq6_A 284 RQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMAYSWGGY 363 (415)
T ss_dssp HHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHHHHHHTTCSSCEECSCCCSS
T ss_pred HHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHHHHHHHHHhCCcCeEeccCCCC
Confidence 67778888888888875 221 1111 000 12456888999643223333333321 22344443311
Q ss_pred ---------------------CCCCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 340 ---------------------KVAGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 340 ---------------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
...++.+|+|+....++++++.+.++|++
T Consensus 364 ~s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 364 ESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp SCEEEEECHHHHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred ceeEEecCCCccccccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence 01246799998887778888888887753
No 195
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.94 E-value=5.9e-25 Score=223.30 Aligned_cols=306 Identities=9% Similarity=0.006 Sum_probs=225.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCC--
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG-- 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-- 118 (401)
...+.++++.+++++|.+. .+++++|+++|+..++.+++++||+|+++.++|++... .+...|++++.++.+.+
T Consensus 204 ~g~v~~~ee~la~l~G~d~--~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~--~~~~~G~~~v~v~~~~~~~ 279 (755)
T 2vyc_A 204 TGAFGESEKYAARVFGADR--SWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQ--GLMLTGAKPVYMVPSRNRY 279 (755)
T ss_dssp CHHHHHHHHHHHHHHTCSE--EEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--HHHHHCCEEEEECCCBCTT
T ss_pred ccHHHHHHHHHHHHhCCCc--eEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHH--HHHHcCCEEEEEeCCCCcc
Confidence 3557789999999999864 36778888899999999999999999999999988763 35668999999987643
Q ss_pred ---CCC-----ChHHHHHHHhccC------CCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcce
Q 015729 119 ---EGA-----KLDVLASKLAADT------AHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAID 184 (401)
Q Consensus 119 ---~~~-----d~~~le~~~~~~~------~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~ 184 (401)
+.+ |++++++++++++ ..++++++++++ |++|.+.|+++|.++|++ +|+++|+|++|+.+...
T Consensus 280 g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~--~~~~livDeA~~~~~~~ 356 (755)
T 2vyc_A 280 GIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEK--TSDRLHFDEAWYGYARF 356 (755)
T ss_dssp SCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTT--TCSEEEEECTTCTTGGG
T ss_pred ccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHH--cCCEEEEECcCchhccc
Confidence 235 9999999997632 013458899986 799999999999999999 99999999999753211
Q ss_pred ec----cCc-cc--ceE------EEecCCCcccCCCcceEEEecHH--HHHHhccCCCCccccchHHHHHHhhcCCCCCC
Q 015729 185 FR----MDE-WG--IDV------ALTGSQKALSLPTGMGIVCASPK--ALEASKTAKSVRVFFDWKDYIKFYNLGTFWPY 249 (401)
Q Consensus 185 ~~----~~~-~~--~di------~~~s~~K~l~g~~g~G~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 249 (401)
.. ... .+ +|+ +++|+||+++|+.+.|+++++++ ..+ ...+......+. .+
T Consensus 357 ~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~----------~~~~~~~~~~~~-----s~ 421 (755)
T 2vyc_A 357 NPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAIN----------FSRFNQAYMMHA-----TT 421 (755)
T ss_dssp CGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCC----------HHHHHHHHHHTS-----CS
T ss_pred CcccCCcchhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccC----------HHHHHHHHHHhC-----CC
Confidence 00 111 24 455 99999999988777788888765 110 000111112222 34
Q ss_pred CCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-C---------CccccCCCc-----------------
Q 015729 250 TPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-G---------LKNCTQKEE----------------- 302 (401)
Q Consensus 250 ~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g---------~~~~~~~~~----------------- 302 (401)
+++...++++.+|++.+...|.+...++..++.+++++.|+++ | ++++.+...
T Consensus 422 sp~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (755)
T 2vyc_A 422 SPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTK 501 (755)
T ss_dssp SCCHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHH
T ss_pred CHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccch
Confidence 5888899999999998876644778889999999999999886 5 554443210
Q ss_pred ------------------------c----CCceeEEEEcCC----------CCCHHHHHHHHHhhCCeEEccCCCCCCCc
Q 015729 303 ------------------------W----FSDTVTAVIVPS----------HINSSEIVRRAWQRYNLSLGLGLNKVAGK 344 (401)
Q Consensus 303 ------------------------~----~~~~~~~~~~~~----------~~~~~~l~~~L~~~~~i~v~~g~~~~~~~ 344 (401)
. ..+..+.+.++. |+++..+.+.|.+ +||.+... ..+
T Consensus 502 ~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~-~gI~~e~~----~~~ 576 (755)
T 2vyc_A 502 LLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGR-HGIVPTRT----TDF 576 (755)
T ss_dssp HHHHCGGGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHT-TTCCCSEE----CSS
T ss_pred hccchhhhhccCcccccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHH-CCCEEeec----CCC
Confidence 0 023466676753 5677899999976 69876432 345
Q ss_pred EEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 345 VFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 345 ~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.+|+.+....|++++++++++|+++.+..
T Consensus 577 ~v~~~~~~g~t~~~~~~l~~al~~~~~~~ 605 (755)
T 2vyc_A 577 QIMFLFSMGVTRGKWGTLVNTLCSFKRHY 605 (755)
T ss_dssp EEEEECCTTCCTTTTHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 78888887889999999999999887644
No 196
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.94 E-value=1e-24 Score=206.73 Aligned_cols=284 Identities=14% Similarity=0.090 Sum_probs=198.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (401)
.+...++++.+++++|.+ + .++++||++|+..++.+++++||+|+++.+.|++.. +...++..|++++.++..
T Consensus 58 ~~~~~~l~~~la~~~g~~--~-~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-- 132 (389)
T 3acz_A 58 NPTVEQFEEMVCSIEGAA--G-SAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDTS-- 132 (389)
T ss_dssp CHHHHHHHHHHHHHHTCS--E-EEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTT--
T ss_pred ChHHHHHHHHHHHHhCCC--e-EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCC--
Confidence 466889999999999986 2 667778899999999888999999999999888764 334467789999999863
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEec
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s 198 (401)
|++++++++++ ++++|++++++||+|.+.|+++|.++|++ +|+++|+|++++.+...... ..++|+++.|
T Consensus 133 ---d~~~l~~~i~~----~~~~v~~~~~~nptG~~~~l~~i~~~~~~--~~~~livD~~~~~~~~~~~~-~~~~di~~~S 202 (389)
T 3acz_A 133 ---DVEKVKAAWKP----NTKMVYLESPANPTCKVSDIKGIAVVCHE--RGARLVVDATFTSPCFLKPL-ELGADIALHS 202 (389)
T ss_dssp ---CHHHHHHTCCT----TEEEEEEESSCTTTCCCCCHHHHHHHHHH--HTCEEEEECTTTCTTTCCGG-GTTCSEEEEE
T ss_pred ---CHHHHHHhcCC----CCeEEEEECCCCCCCeecCHHHHHHHHHH--cCCEEEEECCCccccccCcc-ccCCeEEEEC
Confidence 89999998874 56999999999999999999999999999 99999999999866531112 2579999999
Q ss_pred CCCcccCCCc--ceEEEecH-HHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHH
Q 015729 199 SQKALSLPTG--MGIVCASP-KALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVI 275 (401)
Q Consensus 199 ~~K~l~g~~g--~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~ 275 (401)
.+|+++++.+ .|++++++ ++.+++.... .. .| .+.+....+....+++ .+....
T Consensus 203 ~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~------------~~--~g----~~~~~~~~~~~~~~l~-----~l~~r~ 259 (389)
T 3acz_A 203 VSKYINGHGDVIGGVSSAKTAEDIATIKFYR------------KD--AG----SLMAPMDAFLCARGMK-----TLPIRM 259 (389)
T ss_dssp TTTTTTCSSCCCCEEEEESSHHHHHHHHHHH------------HH--HC----CCCCHHHHHHHHHHHT-----THHHHH
T ss_pred ChhhccCCCCceeEEEEECcHHHHHHHHHHH------------Hh--cC----CCCCHHHHHHHHcCcc-----HHHHHH
Confidence 9999976655 49999998 8776654310 00 12 2344433333333333 234456
Q ss_pred HHHHHHHHHHHHHHHHcC-C--------------ccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEcc---C
Q 015729 276 ERHRRLGKATRLAVEAWG-L--------------KNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGL---G 337 (401)
Q Consensus 276 ~~~~~~~~~l~~~L~~~g-~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~---g 337 (401)
++..++.+.+.+.|++.+ + .+..+... ..+.++.|.++ + ..++.+.|. +.++.++. |
T Consensus 260 ~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~-g~g~~~~~~l~-~--~~~~~~~l~-~~~i~~~~~s~G 334 (389)
T 3acz_A 260 QIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMT-GYGSTFLFEMK-S--FEAAKKLME-HLKVCTLAVSLG 334 (389)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCS-SCCSEEEEEES-S--HHHHHHHHT-TCSSSEEBSCCC
T ss_pred HHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCC-CCCeEEEEEEC-C--HHHHHHHHH-hCCCcEECcCCC
Confidence 667778888888887742 1 11100001 12457778884 3 455555554 44776655 3
Q ss_pred ------CCC-----------------CCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 338 ------LNK-----------------VAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 338 ------~~~-----------------~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
..+ ...+.+|+++... +.+.+++.+.++++
T Consensus 335 ~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~----~~~~li~~l~~al~ 387 (389)
T 3acz_A 335 CVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIE----NVDDIIADLKQALE 387 (389)
T ss_dssp CSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSS----CHHHHHHHHHHHHT
T ss_pred CcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccC----CHHHHHHHHHHHHh
Confidence 111 1246899987653 55666666666654
No 197
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.94 E-value=5e-25 Score=212.99 Aligned_cols=322 Identities=12% Similarity=0.074 Sum_probs=210.8
Q ss_pred hHHHHHHHccCcCC--CCC--ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC--CCCCeEEEEcCCc
Q 015729 21 PDQVIRAMNRNNED--YRS--PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL--SPGDRIISFLIGQ 94 (401)
Q Consensus 21 ~~~v~~a~~~~~~~--~~~--~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~--~~gd~vl~~~~~~ 94 (401)
++++++++.+.... +.. ....+...++.++++++++.+..+++++++||++|++.++.... ..+++|++..++|
T Consensus 79 ~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~g~~~ii~~~~~y 158 (451)
T 3oks_A 79 APKVVEAVRSQVGDFTHTCFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVENAVKIARSHTHKPAVVAFDHAY 158 (451)
T ss_dssp CHHHHHHHHHHHTTCSCCTTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCC
T ss_pred CHHHHHHHHHHHHhcccccCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEEcCCc
Confidence 56666666654322 221 23446677899999999876544569999999999999986544 3458899999988
Q ss_pred chHHHHHHHHHc------------CCcEEEEeCCCCC-----CC--------ChHHHHHHHhcc-CCCCceEEEEEecCC
Q 015729 95 FSLLWIDQQQRL------------NFNVDVVESDWGE-----GA--------KLDVLASKLAAD-TAHTIKAICIVHNET 148 (401)
Q Consensus 95 ~~~~~~~~~~~~------------g~~~~~v~~~~~~-----~~--------d~~~le~~~~~~-~~~~~~~i~~~~~~n 148 (401)
|+.......... ...+..++.+... .. +++.+++.+++. ..+++++|++..+++
T Consensus 159 hG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~aavi~ep~~~ 238 (451)
T 3oks_A 159 HGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADNLAAVVIEPIQG 238 (451)
T ss_dssp CCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBT
T ss_pred CCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCCEEEEEEcCCcC
Confidence 877633222111 1145666654211 01 244444555421 113467777777677
Q ss_pred Ccccccc----hHHHHHHhhhcCCCcEEEEecccccCcc-----eeccCcccceEEEecCCCcccCCCcceEEEecHHHH
Q 015729 149 ATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKAL 219 (401)
Q Consensus 149 ~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~ 219 (401)
+.|.+.+ +++|.++|++ +|+++|+|++|..... ..+.....+|++++| |+++++.++|+++++++++
T Consensus 239 ~gG~~~~~~~~l~~l~~l~~~--~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~s--K~l~~G~~iG~v~~~~~~~ 314 (451)
T 3oks_A 239 EGGFIVPADGFLPTLLDWCRK--NDVVFIADEVQTGFARTGAMFACEHEGIDPDLIVTA--KGIAGGLPLSAVTGRAEIM 314 (451)
T ss_dssp TTTCBCCCTTHHHHHHHHHHH--TTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTSSCEEEEEEHHHH
T ss_pred CCCccCCCHHHHHHHHHHHHH--cCCEEEEEecccCCCccccchhhhhcCCCCCeeeeh--hhhhCCcceEEEEECHHHH
Confidence 7777766 8999999999 9999999999873211 112222346777554 9997767789999999988
Q ss_pred HHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccc
Q 015729 220 EASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNC 297 (401)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~ 297 (401)
+.+..... + ..++.++..+++..++++.+.++ ...++.+++.+++++.|+++ .+...
T Consensus 315 ~~~~~~~~----------------~--~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~ 373 (451)
T 3oks_A 315 DSPHVSGL----------------G--GTYGGNPIACAAALATIETIESE---GLVARAQQIEKIMKDRLGRLQAEDDRI 373 (451)
T ss_dssp TCSCTTSB----------------C--CSSSSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCTTE
T ss_pred hhhcCCCc----------------C--CCCCCCHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 77654211 1 13456677777788888877654 35666666777777777654 22222
Q ss_pred cCCCccCCceeEEEEcC-------CCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 298 TQKEEWFSDTVTAVIVP-------SHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 298 ~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
.... ..+.++++.+. +..+..++.+.|.++ ||.+.++.. .++++||++...++++++++++++|++++
T Consensus 374 ~~~~--~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~--~~~~iRi~~~~~~t~e~i~~~l~~l~~~l 448 (451)
T 3oks_A 374 GDVR--GRGAMIAMELVKAGTTEPDADLTKALCAGAHAA-GVIVLSCGT--YGNVVRFLPPLSIGDDLLNEGLDVLEEVL 448 (451)
T ss_dssp EEEE--EETTEEEEEEBSTTSCCBCHHHHHHHHHHHHHT-TEECEEECT--TSCEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEE--EeeEEEEEEEecCccCCCCHHHHHHHHHHHHhC-CcEEecCCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 1111 22446777662 212355788888876 999887643 25789998888889999999999999988
Q ss_pred Hh
Q 015729 371 KD 372 (401)
Q Consensus 371 ~~ 372 (401)
++
T Consensus 449 ~~ 450 (451)
T 3oks_A 449 RG 450 (451)
T ss_dssp HC
T ss_pred hh
Confidence 64
No 198
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.94 E-value=6.2e-25 Score=212.35 Aligned_cols=320 Identities=13% Similarity=0.074 Sum_probs=208.7
Q ss_pred hHHHHHHHccCcC--CCC--CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC--CCCCeEEEEcCCc
Q 015729 21 PDQVIRAMNRNNE--DYR--SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL--SPGDRIISFLIGQ 94 (401)
Q Consensus 21 ~~~v~~a~~~~~~--~~~--~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~--~~gd~vl~~~~~~ 94 (401)
++.|++++.+... .+. .....+...++.++++++++.+..+++++++||++|++.++.... ..+++|++.+++|
T Consensus 82 ~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~alk~a~~~~g~~~ii~~~~~y 161 (453)
T 4ffc_A 82 HPAVAAAIADQATHFTHTCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVENAIKVARLATGRPAVVAFDNAY 161 (453)
T ss_dssp CHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCC
T ss_pred CHHHHHHHHHHHHhccccccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHHHHHHHHHHhcCCCEEEEEcCcc
Confidence 5666666655321 122 123456677999999999876544569999999999999986543 3568999999998
Q ss_pred chHHHHHHHHHc------------CCcEEEEeCCCCC----CCC--------hHHHHHHHhccCCCCceEEEEEecCCCc
Q 015729 95 FSLLWIDQQQRL------------NFNVDVVESDWGE----GAK--------LDVLASKLAADTAHTIKAICIVHNETAT 150 (401)
Q Consensus 95 ~~~~~~~~~~~~------------g~~~~~v~~~~~~----~~d--------~~~le~~~~~~~~~~~~~i~~~~~~n~t 150 (401)
|+.......... ...+..++.+... ..+ .+++++.+.. +.+++|+++..++..
T Consensus 162 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~---~~~aavi~ep~~~~g 238 (453)
T 4ffc_A 162 HGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGA---QSLAAIIIEPIQGEG 238 (453)
T ss_dssp CCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCG---GGEEEEEECSSBTTT
T ss_pred CCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCC---CCEEEEEEcCCCCCC
Confidence 877632222111 1145666654211 122 2445554432 245666666655666
Q ss_pred ccccc----hHHHHHHhhhcCCCcEEEEecccccCcc---e--eccCcccceEEEecCCCcccCCCcceEEEecHHHHHH
Q 015729 151 GVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI---D--FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEA 221 (401)
Q Consensus 151 G~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~---~--~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~ 221 (401)
|.+.+ +++|.++|++ +|+++|+|++|..... . .+.....+|++++| |+++++.++|++++++++++.
T Consensus 239 G~~~~~~~~l~~l~~l~~~--~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~t~s--K~~~~G~~~G~~~~~~~i~~~ 314 (453)
T 4ffc_A 239 GFIVPAPGFLATLTAWASE--NGVVFIADEVQTGFARTGAWFASEHEGIVPDIVTMA--KGIAGGMPLSAVTGRAELMDA 314 (453)
T ss_dssp TSBCCCTTHHHHHHHHHHH--HTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEEC--GGGGTTSSCEEEEEEHHHHTT
T ss_pred CcccCCHHHHHHHHHHHHH--cCCEEEEecCccCCCcccccchhhhcCCCcchHhhh--hhhcCCcCeEEEEECHHHHhh
Confidence 67765 8999999999 9999999999873211 1 12122346777665 999776778999999998877
Q ss_pred hccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccC
Q 015729 222 SKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQ 299 (401)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~ 299 (401)
+..... + .+++.++..+++..++++.+.+++ ..++.+++.+++++.|+++ .+.....
T Consensus 315 ~~~~~~----------------~--~t~~~~~~~~aaa~aal~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 373 (453)
T 4ffc_A 315 VYAGGL----------------G--GTYGGNPVTCAAAVAALGVMRELD---LPARARAIEASVTSRLSALAEEVDIIGE 373 (453)
T ss_dssp SCTTSS----------------C--CSSSSCHHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHHCSSEEE
T ss_pred hcccCc----------------C--CCCCcCHHHHHHHHHHHHHhhhhh---HHHHHHHHHHHHHHHHHHHHhhCCCeEE
Confidence 654311 1 134466777777888888776543 5556666666677666653 2222211
Q ss_pred CCccCCceeEEEEcCC-------CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 300 KEEWFSDTVTAVIVPS-------HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 300 ~~~~~~~~~~~~~~~~-------~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.. ..+.++++.+.+ .....++.+.|+++ ||.+.++.. .++.+||++...++++|+++++++|++++++
T Consensus 374 ~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~--~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 448 (453)
T 4ffc_A 374 VR--GRGAMLAIEIVKPGTLEPDAALTKSIAAEALSQ-GVLILTCGT--FGNVIRLLPPLVIGDDLLDEGITALSDIIRA 448 (453)
T ss_dssp EE--EETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHT-TEECCEECT--TSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EE--eeceEEEEEEecCcccCCCHHHHHHHHHHHHhC-CCEEecCCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 11 224467776622 11255788888876 999987643 2578999888888999999999999999986
Q ss_pred c
Q 015729 373 V 373 (401)
Q Consensus 373 ~ 373 (401)
+
T Consensus 449 ~ 449 (453)
T 4ffc_A 449 K 449 (453)
T ss_dssp H
T ss_pred H
Confidence 5
No 199
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.94 E-value=3.7e-25 Score=209.92 Aligned_cols=288 Identities=14% Similarity=0.052 Sum_probs=199.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCC
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDW 117 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~ 117 (401)
......++++.+++++|.+. +++++||++|++.++.+++++||+|+++.++|++.. +....+..|++++.++.+
T Consensus 64 ~~~~~~~l~~~la~~~g~~~---~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~- 139 (392)
T 3qhx_A 64 GNPTRTALEAALAAVEDAAF---GRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALA- 139 (392)
T ss_dssp CCHHHHHHHHHHHHHTTCSE---EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECTT-
T ss_pred CChHHHHHHHHHHHHhCCCc---EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCC-
Confidence 34568899999999998863 888999999999999888999999999999988765 334447789999999865
Q ss_pred CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEe
Q 015729 118 GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALT 197 (401)
Q Consensus 118 ~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~ 197 (401)
|++++++++++ ++++|++++++||+|.+.|+++|.++|++ +|+++|+|++++.+.. .+....++|+++.
T Consensus 140 ----d~~~l~~~i~~----~~~~v~~~~~~nptG~~~~l~~i~~la~~--~g~~li~D~~~~~~~~-~~~~~~~~di~~~ 208 (392)
T 3qhx_A 140 ----DLDAVRAAIRP----TTRLIWVETPTNPLLSIADIAGIAQLGAD--SSAKVLVDNTFASPAL-QQPLSLGADVVLH 208 (392)
T ss_dssp ----CHHHHHHHCCT----TEEEEEEESSCTTTCCCCCHHHHHHHHHH--HTCEEEEECTTTCTTT-CCGGGGTCSEEEE
T ss_pred ----CHHHHHHhhCC----CCeEEEEECCCCCCcEEecHHHHHHHHHH--cCCEEEEECCCccccc-CChHHhCCcEEEE
Confidence 89999999974 67999999999999999999999999999 9999999999986532 2334568999999
Q ss_pred cCCCcccCCC--cceEEEec-HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHH
Q 015729 198 GSQKALSLPT--GMGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENV 274 (401)
Q Consensus 198 s~~K~l~g~~--g~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~ 274 (401)
|.||+++++. ..|+++.+ +++.+.+... .. .. ..+.+...++.+...++. +...
T Consensus 209 S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~-------------~~-~~----g~~~~~~~~~~~~~~l~~-----l~~~ 265 (392)
T 3qhx_A 209 STTKYIGGHSDVVGGALVTNDEELDQSFAFL-------------QN-GA----GAVPGPFDAYLTMRGLKT-----LVLR 265 (392)
T ss_dssp ETTTTTTCSSCCCCEEEEESCHHHHHHHHHH-------------HH-HH----CCCCCHHHHHHHHHHHTT-----HHHH
T ss_pred cCccccCCCCCceEEEEEECcHHHHHHHHHH-------------HH-hc----CCCCCHHHHHHHHhhhhH-----HHHH
Confidence 9999996543 26999987 4665554321 00 01 123455433333333332 4456
Q ss_pred HHHHHHHHHHHHHHHHHc-CCccc-cCC----Cc--------cCCceeEEEEcCCC-CCHHHHHHHHHhhCCeEEccCCC
Q 015729 275 IERHRRLGKATRLAVEAW-GLKNC-TQK----EE--------WFSDTVTAVIVPSH-INSSEIVRRAWQRYNLSLGLGLN 339 (401)
Q Consensus 275 ~~~~~~~~~~l~~~L~~~-g~~~~-~~~----~~--------~~~~~~~~~~~~~~-~~~~~l~~~L~~~~~i~v~~g~~ 339 (401)
.++..++++.+.+.|++. ++... .+. +. ...+.+++|.++.+ .....+...|. ..++.+..|..
T Consensus 266 ~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~-~~~~~~s~G~~ 344 (392)
T 3qhx_A 266 MQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTN-IFILAESLGSV 344 (392)
T ss_dssp HHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCS-SSEECSCCCCS
T ss_pred HHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCC-CceECCCCCCC
Confidence 677788888888888875 33211 110 00 12356888998542 23445555553 33555554432
Q ss_pred ------C--------------CCCcEEEEeecccCCHHHHHHHHHHH
Q 015729 340 ------K--------------VAGKVFRIGHLGHLNELQLLGCLAGV 366 (401)
Q Consensus 340 ------~--------------~~~~~~Ri~~~~~~~~~di~~~~~~i 366 (401)
+ ..++.+|||+....++++++.+.++|
T Consensus 345 ~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~~~i~~l~~al 391 (392)
T 3qhx_A 345 ESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIEDVADLLDDLKQAL 391 (392)
T ss_dssp SCEEECGGGTSCGGGBTTBCCCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred CceeeCcccccccccCHHHcCCCCCeEEEEeccCCHHHHHHHHHHHh
Confidence 0 23567999876644455555554443
No 200
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.94 E-value=8.3e-26 Score=222.56 Aligned_cols=316 Identities=15% Similarity=0.051 Sum_probs=190.9
Q ss_pred CceEEecCChhHHHHHHHhc-----cCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCC--CCCChHHHHHHHhc
Q 015729 60 GTPFLIPTTGTGAWESALTN-----TLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAA 132 (401)
Q Consensus 60 ~~~i~~~~g~t~a~~~~~~~-----~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~le~~~~~ 132 (401)
++++++++|+++|+..++.+ ++++||+|++++|+|+++.........|++++.++.+++ +.+|++++++.++
T Consensus 165 ~~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~- 243 (546)
T 2zy4_A 165 SVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKD- 243 (546)
T ss_dssp GEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGS-
T ss_pred cceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhC-
Confidence 46699999999999998866 578999999999988776532223345788999988654 3589999988764
Q ss_pred cCCCCceEEEEEecCCCcccccch---HHHHHHh--hhcCCCcEEEEecccccCcce-eccC--cccceEEEecCCCccc
Q 015729 133 DTAHTIKAICIVHNETATGVTNNL---SKVRKLL--DEYRHPALFLVDGVSSICAID-FRMD--EWGIDVALTGSQKALS 204 (401)
Q Consensus 133 ~~~~~~~~i~~~~~~n~tG~~~~l---~~i~~l~--~~~~~~~~li~D~a~~~~~~~-~~~~--~~~~di~~~s~~K~l~ 204 (401)
.+++++++++|+||||.+++. ++|.++| ++ +|++||+|++|+..... ..+. ..+.++++.|.+|+++
T Consensus 244 ---~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~--~~~~ii~De~y~~~~~~~~s~~~~~~~~~i~~~S~SK~~g 318 (546)
T 2zy4_A 244 ---PAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHR--PDLMILTDDVYGTFADDFQSLFAICPENTLLVYSFSKYFG 318 (546)
T ss_dssp ---TTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTC--TTCEEEEECTTGGGSTTCCCHHHHCGGGEEEEEESTTTTT
T ss_pred ---CCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhcc--CCcEEEEeCcchhhcccCcCHHHhCCCCEEEEEeCccccC
Confidence 467999999999999999974 5577888 56 99999999999854321 1111 1246899999999884
Q ss_pred CCCc--ceEEEecHH-HHHHhccCCC----------------CccccchHHHH-HHhh-cCCCCCCCCcHHHHHH-HHHH
Q 015729 205 LPTG--MGIVCASPK-ALEASKTAKS----------------VRVFFDWKDYI-KFYN-LGTFWPYTPSIQLLYG-LRAA 262 (401)
Q Consensus 205 g~~g--~G~l~~~~~-~~~~~~~~~~----------------~~~~~~~~~~~-~~~~-~g~~~~~~~~~~~~~a-~~~a 262 (401)
.+| +|+++++++ +.+.+..... ......+.+.+ .... ...+...+.+.....+ ...+
T Consensus 319 -~~GlRiG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a 397 (546)
T 2zy4_A 319 -ATGWRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFS 397 (546)
T ss_dssp -CGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHH
T ss_pred -CCCcceEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHH
Confidence 444 699998875 6665532110 00000000000 0000 0000011233322222 1112
Q ss_pred H-HHHHH--hcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCC----------------CCCHHH-H
Q 015729 263 L-DLIFE--EGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS----------------HINSSE-I 322 (401)
Q Consensus 263 l-~~~~~--~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~-l 322 (401)
+ .++.+ ...+..++.++++.+.+.+.|. .++.+..+ ..+.++++.++. +.+..+ +
T Consensus 398 ~~all~~~~~~~~~~r~~~~~r~~~l~~~L~-~~~~~~~~----~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l 472 (546)
T 2zy4_A 398 LFALMDEADEYKHTLKQLIRRRETTLYRELG-MPPLRDEN----AVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDML 472 (546)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHHHHHGGGT-SSCCCCTT----BCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHhcC-CCcccCCC----CeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHH
Confidence 2 22221 1145566667777776666664 33332221 345677887642 112333 4
Q ss_pred HHHHHhhCCeEEccCCCCC-CCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCCCCCcch---HHHHHHHH
Q 015729 323 VRRAWQRYNLSLGLGLNKV-AGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGYPVKLGS---GVAAASAY 389 (401)
Q Consensus 323 ~~~L~~~~~i~v~~g~~~~-~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~~~~~~~---~~~~~~~~ 389 (401)
.+.|.+ .||.+.+|.... .++++||++. ..+++++++++++|+++++++..+++..+ ++.++++|
T Consensus 473 ~~ll~~-~gV~v~pG~~F~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 541 (546)
T 2zy4_A 473 FRIADE-TGIVLLPGRGFGSNRPSGRASLA-NLNEYEYAAIGRALRKMADELYAEYSGQAQNLKLAAALEH 541 (546)
T ss_dssp HHHHHH-HSCCCEESSCTTCSSCEEEEESS-SSCHHHHHHHHHHHHHHHHHHHHHTC--------------
T ss_pred HHHHHH-CCEEEeCccccCCCCCeEEEEec-cCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhh
Confidence 444544 499999985432 3467999875 46899999999999999887653333222 35555544
No 201
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.94 E-value=1.5e-24 Score=206.41 Aligned_cols=286 Identities=14% Similarity=0.093 Sum_probs=195.6
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCC
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGE 119 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 119 (401)
....++++.+++++|.+ + .+++++|++|+..++. ++++||+|+++.+.|++.. +...++..|++++.++.+
T Consensus 67 p~~~~l~~~la~~~g~~--~-~i~~~sG~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~--- 139 (403)
T 3cog_A 67 PTRNCLEKAVAALDGAK--Y-CLAFASGLAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCS--- 139 (403)
T ss_dssp HHHHHHHHHHHHHHTCS--E-EEEESCHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTT---
T ss_pred chHHHHHHHHHHHhCCC--c-EEEECCHHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCC---
Confidence 55779999999999986 3 3445556799999988 8999999999999888754 333456789999999875
Q ss_pred CCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCC-cEEEEecccccCcceeccCcccceEEEec
Q 015729 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHP-ALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 120 ~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~-~~li~D~a~~~~~~~~~~~~~~~di~~~s 198 (401)
|++++++++++ ++++|++++++||+|.+.|+++|.++|++ +| +++|+|++|+.+...... ..++|+++.|
T Consensus 140 --d~~~l~~~i~~----~t~~v~~~~p~nptG~~~~l~~i~~la~~--~g~~~livD~~~~~~~~~~~~-~~~~div~~S 210 (403)
T 3cog_A 140 --KIKLLEAAITP----ETKLVWIETPTNPTQKVIDIEGCAHIVHK--HGDIILVVDNTFMSPYFQRPL-ALGADISMYS 210 (403)
T ss_dssp --SHHHHHHHCCT----TEEEEEEESSCTTTCCCCCHHHHHHHHTS--SSCCEEEEECTTTCTTTCCTT-TTTCSEEEEE
T ss_pred --CHHHHHHhcCc----CCeEEEEECCCCCCCeeeCHHHHHHHHHH--cCCCEEEEECCCcccccCCcc-ccCCeEEEEc
Confidence 79999998873 67999999999999999999999999999 99 999999999877532222 2579999999
Q ss_pred CCCcccCCCc--ceEEEec-HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHH
Q 015729 199 SQKALSLPTG--MGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVI 275 (401)
Q Consensus 199 ~~K~l~g~~g--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~ 275 (401)
.+|+++++.+ +|+++++ +++.+++.... .. +..+.+...++++..+++. +....
T Consensus 211 ~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~------------~~------~g~~~~~~~~~~~~~~l~~-----l~~r~ 267 (403)
T 3cog_A 211 ATKYMNGHSDVVMGLVSVNCESLHNRLRFLQ------------NS------LGAVPSPIDCYLCNRGLKT-----LHVRM 267 (403)
T ss_dssp TTTTTTCSSCCCCEEEEECCHHHHHHHHHHH------------HH------HCCCCCHHHHHHHHHHHTT-----HHHHH
T ss_pred ChhhccCCCCCeEEEEEECcHHHHHHHHHHH------------Hh------cCCCCCHHHHHHHHhhhhH-----HHHHH
Confidence 9999987665 4999985 67766554210 00 1123455444444444432 33455
Q ss_pred HHHHHHHHHHHHHHHHc---------------CCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEcc---C
Q 015729 276 ERHRRLGKATRLAVEAW---------------GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGL---G 337 (401)
Q Consensus 276 ~~~~~~~~~l~~~L~~~---------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~---g 337 (401)
++..++.+.+.+.|++. ++++..++.. ..+.++.|.++.+ ..++.+.|. +.+|.+.. |
T Consensus 268 ~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~-~~g~~~~~~l~~~--~~~~~~~l~-~~~i~~~~~s~G 343 (403)
T 3cog_A 268 EKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCT-GCTGMVTFYIKGT--LQHAEIFLK-NLKLFTLAESLG 343 (403)
T ss_dssp HHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCS-CCCSEEEEEESSC--HHHHHHHHH-HCSSSEECSCCS
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCC-CCceEEEEEecCC--HHHHHHHHH-hCCcceEccCCC
Confidence 55666666677766553 1222111111 2345777777432 345555554 44764332 2
Q ss_pred C------------C-----------CCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 338 L------------N-----------KVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 338 ~------------~-----------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
. + ...++.+||++....++++++.+.++|++++
T Consensus 344 ~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~~~ 399 (403)
T 3cog_A 344 GFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKAAH 399 (403)
T ss_dssp SSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHHC
T ss_pred CcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHHhh
Confidence 1 0 0125689999887666777777777766543
No 202
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.94 E-value=8e-25 Score=212.35 Aligned_cols=320 Identities=12% Similarity=0.074 Sum_probs=217.1
Q ss_pred hHHHHHHHccCcC----CCC-CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCC--------CCCeE
Q 015729 21 PDQVIRAMNRNNE----DYR-SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLS--------PGDRI 87 (401)
Q Consensus 21 ~~~v~~a~~~~~~----~~~-~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~--------~gd~v 87 (401)
+|+|++++.+... .+. .....+...++.++++++++.+. +.+++++||++|++.++..... ++++|
T Consensus 73 ~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~-~~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~i 151 (472)
T 3hmu_A 73 RDELAEVAARQMRELPYYNTFFKTTHVPAIALAQKLAELAPGDL-NHVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVI 151 (472)
T ss_dssp CHHHHHHHHHHHHHCSCCCSSSSEECHHHHHHHHHHHHHSCTTE-EEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEE
T ss_pred CHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCC-CEEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEE
Confidence 4556666555321 111 12234667789999999986543 3599999999999999876543 46889
Q ss_pred EEEcCCcchHHHHHHHHHcCC-----------cEEEEeCCCCCC----CC--------hHHHHHHHhccCCCCceEEEEE
Q 015729 88 ISFLIGQFSLLWIDQQQRLNF-----------NVDVVESDWGEG----AK--------LDVLASKLAADTAHTIKAICIV 144 (401)
Q Consensus 88 l~~~~~~~~~~~~~~~~~~g~-----------~~~~v~~~~~~~----~d--------~~~le~~~~~~~~~~~~~i~~~ 144 (401)
++.+++|++........ .+. .+..++.+...+ .| +++|++.+++...+++++|+++
T Consensus 152 i~~~~~yHg~t~~~~~~-~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~e 230 (472)
T 3hmu_A 152 ISRKNAYHGSTVASSAL-GGMAGMHAQSGLIPDVHHINQPNWWAEGGDMDPEEFGLARARELEEAILELGENRVAAFIAE 230 (472)
T ss_dssp EEETTCCCCSSHHHHHH-SCCHHHHHTTCCCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEEC
T ss_pred EEEcCcCCCccHHhhhc-cCChhhccccCCCCCcEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHhcCCCCEEEEEEc
Confidence 99999888765322211 111 345555433100 23 7888888864221357888888
Q ss_pred ecCCCcccccc----hHHHHHHhhhcCCCcEEEEecccccC-cc--ee--ccCcccceEEEecCCCcccCC-CcceEEEe
Q 015729 145 HNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSIC-AI--DF--RMDEWGIDVALTGSQKALSLP-TGMGIVCA 214 (401)
Q Consensus 145 ~~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~-~~--~~--~~~~~~~di~~~s~~K~l~g~-~g~G~l~~ 214 (401)
.+++++|.+.+ +++|.++|++ +|+++|+|++|... .. .+ +.....+|++++| |+++++ .++|++++
T Consensus 231 pv~~~gG~~~~~~~~l~~l~~l~~~--~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~t~s--K~l~gg~~plG~v~~ 306 (472)
T 3hmu_A 231 PVQGAGGVIVAPDSYWPEIQRICDK--YDILLIADEVICGFGRTGNWFGTQTMGIRPHIMTIA--KGLSSGYAPIGGSIV 306 (472)
T ss_dssp SSBSTTTCBCCCTTHHHHHHHHHHH--TTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEEC--GGGTTTSSCCEEEEE
T ss_pred CccCCCCcccCCHHHHHHHHHHHHH--cCCEEEEEccccCCcccCccchhHHhCCCCceeeec--hhhhcCCcceEEEEE
Confidence 88899999887 8999999999 99999999999732 11 11 1122347888776 998765 57899999
Q ss_pred cHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHH-HHHHHHHHHHHHc-
Q 015729 215 SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHR-RLGKATRLAVEAW- 292 (401)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~-~~~~~l~~~L~~~- 292 (401)
++++++.+.... +..+ .+++.++..+++..++++.+.++ ...++.. ++.+++++.|+++
T Consensus 307 ~~~i~~~~~~~~--------------~~~~--~t~~~np~a~aAa~aaL~~~~~~---~~~~~~~~~~~~~l~~~L~~l~ 367 (472)
T 3hmu_A 307 CDEVAHVIGKDE--------------FNHG--YTYSGHPVAAAVALENLRILEEE---NILDHVRNVAAPYLKEKWEALT 367 (472)
T ss_dssp EHHHHHHHTTSC--------------BCCC--CTTTTCHHHHHHHHHHHHHHHHT---THHHHHHHTHHHHHHHHHHGGG
T ss_pred CHHHHHhcccCC--------------cccc--CCCCCCHHHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHh
Confidence 999988773210 0011 13456677778888888877654 3667777 8888888888775
Q ss_pred CCccccCCCccCCceeEEEEcCCCC------------CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHH
Q 015729 293 GLKNCTQKEEWFSDTVTAVIVPSHI------------NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLL 360 (401)
Q Consensus 293 g~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~ 360 (401)
.++...... ..+.++.+.+.... ...++++.|+++ ||.++++ ++++||++....|++|++
T Consensus 368 ~~~~v~~vr--~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~-----g~~iRi~p~~~~t~e~i~ 439 (472)
T 3hmu_A 368 DHPLVGEAK--IVGMMASIALTPNKASRAKFASEPGTIGYICRERCFAN-NLIMRHV-----GDRMIISPPLVITPAEID 439 (472)
T ss_dssp GSTTEEEEE--EETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHT-TBCCEEE-----TTEEEECCCTTCCHHHHH
T ss_pred cCCCeEEEE--ecCceEEEEEecCccccccccchhHHHHHHHHHHHHHC-CcEEEec-----CCEEEEECCCCCCHHHHH
Confidence 333222111 23446667764211 045788888876 9988765 379999988788999999
Q ss_pred HHHHHHHHHHHhc
Q 015729 361 GCLAGVEMILKDV 373 (401)
Q Consensus 361 ~~~~~i~~~l~~~ 373 (401)
+++++|+++++++
T Consensus 440 ~~l~~l~~~l~~~ 452 (472)
T 3hmu_A 440 EMFVRIRKSLDEA 452 (472)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998754
No 203
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.94 E-value=8.7e-25 Score=212.41 Aligned_cols=324 Identities=15% Similarity=0.139 Sum_probs=218.6
Q ss_pred hHHHHHHHccCcCC--C-CC-ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC--------CCCCeEE
Q 015729 21 PDQVIRAMNRNNED--Y-RS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL--------SPGDRII 88 (401)
Q Consensus 21 ~~~v~~a~~~~~~~--~-~~-~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~--------~~gd~vl 88 (401)
+|.|++++.+.... + .. ....+...++.+.++++++...+ .+++++||++|++.++.... ..+++|+
T Consensus 72 ~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~-~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi 150 (476)
T 3i5t_A 72 RREIVDAMAHQAMVLPYASPWYMATSPAARLAEKIATLTPGDLN-RIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRII 150 (476)
T ss_dssp CHHHHHHHHHHHHHCCCCCTTTCBCHHHHHHHHHHHTTSSTTCC-EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEE
T ss_pred CHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHhcCCCCcC-EEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEE
Confidence 56666666653321 1 11 23456777899999998865443 59999999999999987654 3467899
Q ss_pred EEcCCcchHHHHHHHHHcC------------CcEEEEeCCCC--C-CCC--------hHHHHHHHhccCCCCceEEEEEe
Q 015729 89 SFLIGQFSLLWIDQQQRLN------------FNVDVVESDWG--E-GAK--------LDVLASKLAADTAHTIKAICIVH 145 (401)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~--~-~~d--------~~~le~~~~~~~~~~~~~i~~~~ 145 (401)
+.+++|++....... ..+ ..+..++.+.. . ..| +++||+++++...+++++|+++.
T Consensus 151 ~~~~~yHg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~ep 229 (476)
T 3i5t_A 151 VRYDGYHGSTALTAA-CTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGPDTIAAFLAEP 229 (476)
T ss_dssp EETTCCCCSSHHHHH-TCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECS
T ss_pred EEcCCcCcCChhhcc-ccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 999998887632221 111 12344443321 1 112 78899988742213578999999
Q ss_pred cCCCcccccc----hHHHHHHhhhcCCCcEEEEecccccC-cc--ee--c-cCcccceEEEecCCCcccCC-CcceEEEe
Q 015729 146 NETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSIC-AI--DF--R-MDEWGIDVALTGSQKALSLP-TGMGIVCA 214 (401)
Q Consensus 146 ~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~-~~--~~--~-~~~~~~di~~~s~~K~l~g~-~g~G~l~~ 214 (401)
+++++|.+.+ +++|.++|++ +|+++|+|++|+.. .. .+ . .....+|++++| |+++++ .++|++++
T Consensus 230 ~~~~~G~~~~~~~~L~~l~~lc~~--~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~t~s--K~l~~G~~plg~v~~ 305 (476)
T 3i5t_A 230 ILASGGVIIPPAGYHARFKAICEK--HDILYISDEVVTGFGRCGEWFASEKVFGVVPDIITFA--KGVTSGYVPLGGLAI 305 (476)
T ss_dssp SBTTTTSBCCCTTHHHHHHHHHHH--TTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEEEEC--GGGGTTSSCCEEEEE
T ss_pred ccCCCCcccCCHHHHHHHHHHHHH--cCCEEEEEecccCCccccCceeeecccCCCcchhhhh--hhhcCCCcCeEEEEE
Confidence 8999998665 8999999999 99999999998732 11 11 2 223357888766 999876 67899999
Q ss_pred cHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-C
Q 015729 215 SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-G 293 (401)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g 293 (401)
++++.+.+........ .+..+ .+++.++..+++..++++.+.++ ...++.+++.+++++.|+++ .
T Consensus 306 ~~~i~~~~~~~~~~~~---------~~~~~--~t~~~np~a~aAa~aaL~~~~~~---~~~~~~~~~~~~l~~~L~~l~~ 371 (476)
T 3i5t_A 306 SEAVLARISGENAKGS---------WFTNG--YTYSNQPVACAAALANIELMERE---GIVDQAREMADYFAAALASLRD 371 (476)
T ss_dssp CHHHHHTTSGGGCTTC---------EECCC--CTTTTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHTTTT
T ss_pred CHHHHHHHhcCCcccc---------ccccc--CCCCcCHHHHHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHhc
Confidence 9999887764210000 00111 13456777788888888887664 46778888889999999875 3
Q ss_pred CccccCCCccCCceeEEEEcCCCC-----------CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHH
Q 015729 294 LKNCTQKEEWFSDTVTAVIVPSHI-----------NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGC 362 (401)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~ 362 (401)
.+...... ..+.++.+.+.+.. ...++++.|+++ ||.+.+. ++++||++...++++|++++
T Consensus 372 ~~~v~~v~--~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~-----g~~iRi~p~l~~t~e~i~~~ 443 (476)
T 3i5t_A 372 LPGVAETR--SVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFEL-GLIVRPL-----GDLCVISPPLIISRAQIDEM 443 (476)
T ss_dssp STTEEEEE--EETTEEEEEECCC-----CCHHHHHHHHHHHHHHHHT-TEECEEE-----TTEEEECCCTTCCHHHHHHH
T ss_pred CCCeEEEE--ecCceeEEEEecCccccccccchhHHHHHHHHHHHHC-CCEEEec-----CCEEEEECCCCCCHHHHHHH
Confidence 33222111 23446667764321 145788888877 9998763 37999988778899999999
Q ss_pred HHHHHHHHHh
Q 015729 363 LAGVEMILKD 372 (401)
Q Consensus 363 ~~~i~~~l~~ 372 (401)
+++|++++++
T Consensus 444 l~~l~~~l~~ 453 (476)
T 3i5t_A 444 VAIMRQAITE 453 (476)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988754
No 204
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.94 E-value=7.4e-25 Score=212.35 Aligned_cols=322 Identities=14% Similarity=0.104 Sum_probs=213.0
Q ss_pred hHHHHHHHccCcC----CCC-CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCC--------CCCeE
Q 015729 21 PDQVIRAMNRNNE----DYR-SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLS--------PGDRI 87 (401)
Q Consensus 21 ~~~v~~a~~~~~~----~~~-~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~--------~gd~v 87 (401)
+|.+++++.+... .+. .....+...++.+.++++++.+.+ .+++++||++|++.++..+.+ ++++|
T Consensus 68 ~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~-~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~v 146 (459)
T 4a6r_A 68 RKDFAEAARRQMEELPFYNTFFKTTHPAVVELSSLLAEVTPAGFD-RVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTL 146 (459)
T ss_dssp CHHHHHHHHHHHHHCSCCCTTSSSCCHHHHHHHHHHHHHSCTTCC-EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEE
T ss_pred CHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCCC-EEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEE
Confidence 4556665555321 111 123346678899999999876544 599999999999999877653 57899
Q ss_pred EEEcCCcchHHHHHHHHH-----------cCCcEEEEeCCC----CCCCC--------hHHHHHHHhccCCCCceEEEEE
Q 015729 88 ISFLIGQFSLLWIDQQQR-----------LNFNVDVVESDW----GEGAK--------LDVLASKLAADTAHTIKAICIV 144 (401)
Q Consensus 88 l~~~~~~~~~~~~~~~~~-----------~g~~~~~v~~~~----~~~~d--------~~~le~~~~~~~~~~~~~i~~~ 144 (401)
++.+++||+......... ....+..++.+. +..+| +++|++++++...+++++|+++
T Consensus 147 i~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~~~~vi~e 226 (459)
T 4a6r_A 147 IGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKDMTPDEFGVVAARWLEEKILEIGADKVAAFVGE 226 (459)
T ss_dssp EEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEEC
T ss_pred EEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 999999887663222211 011344555332 10034 7889998874221356788888
Q ss_pred ecCCCcccccc----hHHHHHHhhhcCCCcEEEEecccccC-cc--e--eccCcccceEEEecCCCcccCC-CcceEEEe
Q 015729 145 HNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSIC-AI--D--FRMDEWGIDVALTGSQKALSLP-TGMGIVCA 214 (401)
Q Consensus 145 ~~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~-~~--~--~~~~~~~~di~~~s~~K~l~g~-~g~G~l~~ 214 (401)
.+++++|.+.+ +++|.++|++ +|+++|+|++|... .. . .+.....+|++++| |+++++ .++|++++
T Consensus 227 p~~~~~G~~~~~~~~l~~l~~l~~~--~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~t~s--K~l~gg~~~lg~v~~ 302 (459)
T 4a6r_A 227 PIQGAGGVIVPPATYWPEIERICRK--YDVLLVADEVICGFGRTGEWFGHQHFGFQPDLFTAA--KGLSSGYLPIGAVFV 302 (459)
T ss_dssp SSBTTTTCBCCCTTHHHHHHHHHHH--TTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEEC--GGGGTTSSCCEEEEE
T ss_pred CccCCCCcccCCHHHHHHHHHHHHH--cCCEEEEeccccCCCcccccchHhhcCCCCCeeehh--hhhcCCCCCccceee
Confidence 87888888876 8999999999 99999999998732 11 1 12222346788765 988765 57899999
Q ss_pred cHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHH-HHHHHHHHHH-HHc
Q 015729 215 SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHR-RLGKATRLAV-EAW 292 (401)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~-~~~~~l~~~L-~~~ 292 (401)
++++.+.+..... +..+. +++.++..+++..++++.+.+++ ..++.+ ++.+++++.| +.+
T Consensus 303 ~~~i~~~~~~~~~-------------~~~~~--t~~~~~~~~aaa~aal~~~~~~~---~~~~~~~~~~~~~~~~l~~~l 364 (459)
T 4a6r_A 303 GKRVAEGLIAGGD-------------FNHGF--TYSGHPVCAAVAHANVAALRDEG---IVQRVKDDIGPYMQKRWRETF 364 (459)
T ss_dssp CHHHHHHHHHHCT-------------THHHH--HHCSCHHHHHHHHHHHHHHHHTC---HHHHHHHTHHHHHHHHHHHHH
T ss_pred CHHHHHHhhcCCC-------------cccCC--CCCCCHHHHHHHHHHHHHHhcch---HHHHHHHHHHHHHHHHHHHHH
Confidence 9998887652100 00010 22356667777788888776544 455566 6677777777 444
Q ss_pred -CCccccCCCccCCceeEEEEcCCCCC-----------HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHH
Q 015729 293 -GLKNCTQKEEWFSDTVTAVIVPSHIN-----------SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLL 360 (401)
Q Consensus 293 -g~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~ 360 (401)
......... ..+.++.+.+.+... ..++++.|+++ ||.++++ ++++||++....+++|++
T Consensus 365 ~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~-----g~~iRi~~~~~~t~e~i~ 436 (459)
T 4a6r_A 365 SRFEHVDDVR--GVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRN-NLIMRAC-----GDHIVSAPPLVMTRAEVD 436 (459)
T ss_dssp TTCTTEEEEE--EETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHT-TEECEEE-----TTEEEECCCTTCCHHHHH
T ss_pred hcCCCeEEEE--EEEEEEEEEEecCccccccccchHHHHHHHHHHHHHC-CeEEecC-----CCEEEEECCCCCCHHHHH
Confidence 333222111 233466676643211 56788888877 9998875 379999988788999999
Q ss_pred HHHHHHHHHHHhc
Q 015729 361 GCLAGVEMILKDV 373 (401)
Q Consensus 361 ~~~~~i~~~l~~~ 373 (401)
+++++|+++++++
T Consensus 437 ~~l~~l~~~l~~~ 449 (459)
T 4a6r_A 437 EMLAVAERCLEEF 449 (459)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998764
No 205
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.94 E-value=1.6e-24 Score=205.75 Aligned_cols=314 Identities=11% Similarity=0.027 Sum_probs=209.5
Q ss_pred cCChHHHHHHHccCc---CCCCCccHHHHHHHHHHHHHHHhcCC-----CCc--eEEecCChhHHHHHHHhccCC--CCC
Q 015729 18 VHIPDQVIRAMNRNN---EDYRSPAVPALTKTLLEDIKKIFKTT-----SGT--PFLIPTTGTGAWESALTNTLS--PGD 85 (401)
Q Consensus 18 ~~~~~~v~~a~~~~~---~~~~~~~~~~~~~~l~~~la~~~g~~-----~~~--~i~~~~g~t~a~~~~~~~~~~--~gd 85 (401)
.++++.+.++.. .. .....|.......++|+.+++++... .++ .+++|.|+++|+..++..+.. + |
T Consensus 46 ~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d 123 (405)
T 3k7y_A 46 LHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-E 123 (405)
T ss_dssp BCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-C
T ss_pred CcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-C
Confidence 456788888854 21 11223444455668888888877321 122 368899999999998877766 8 9
Q ss_pred eEEEEcCCcchHHHHHHHHHcCCcEEEEeC-CC-CCCCChHHHHHHHhccCCCCceEEEEEec-CCCcccccc---hHHH
Q 015729 86 RIISFLIGQFSLLWIDQQQRLNFNVDVVES-DW-GEGAKLDVLASKLAADTAHTIKAICIVHN-ETATGVTNN---LSKV 159 (401)
Q Consensus 86 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~-~n~tG~~~~---l~~i 159 (401)
+|++++|+|+++. ..++..|++++.+++ ++ ++.+|++++++.+++.+ ++++++++.+ |||||.+++ +++|
T Consensus 124 ~Vlv~~P~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~--~~~~i~l~~~~~NPTG~~~s~~~~~~l 199 (405)
T 3k7y_A 124 TLYVTNPPYINHV--NMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIP--NGSSVILQISCYNPCSVNIEEKYFDEI 199 (405)
T ss_dssp EEEEESSCCHHHH--HHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHSC--SSCEEEECCSSCTTTCCCCCHHHHHHH
T ss_pred EEEEeCCCCHhHH--HHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhCC--CCeEEEEeCCCCCCCCCCCCHHHHHHH
Confidence 9999999877654 567889999999997 33 46789999999997521 3578888765 899999997 4567
Q ss_pred HHHhhhcCCCcEEEEecccccCcce--------e-cc-CcccceEEEecCCCccc-CCCcceEEEe---cHHHHHHhccC
Q 015729 160 RKLLDEYRHPALFLVDGVSSICAID--------F-RM-DEWGIDVALTGSQKALS-LPTGMGIVCA---SPKALEASKTA 225 (401)
Q Consensus 160 ~~l~~~~~~~~~li~D~a~~~~~~~--------~-~~-~~~~~di~~~s~~K~l~-g~~g~G~l~~---~~~~~~~~~~~ 225 (401)
.++|++ +|++||+|++|...... . .+ ......+++.|.+|+++ .+.++|++++ +++..+++...
T Consensus 200 ~~~~~~--~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~ 277 (405)
T 3k7y_A 200 IEIVLH--KKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNN 277 (405)
T ss_dssp HHHHHH--HCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHH
T ss_pred HHHHHH--CCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHH
Confidence 888888 99999999998743211 0 01 11234688899999995 3455799753 56654443210
Q ss_pred CCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHH--HH---HhcHHHHHHHHHHHHHHHHHHHH----HcC---
Q 015729 226 KSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDL--IF---EEGLENVIERHRRLGKATRLAVE----AWG--- 293 (401)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~--~~---~~g~~~~~~~~~~~~~~l~~~L~----~~g--- 293 (401)
........ ..+++.....++..++.. +. ...++..+++++++++.+.+.|+ ++|
T Consensus 278 ------------l~~~~~~~--~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~ 343 (405)
T 3k7y_A 278 ------------LCFIVRKF--YSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYNLNY 343 (405)
T ss_dssp ------------HHHHHHTT--TSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCC
T ss_pred ------------HHHHHhcc--cCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCC
Confidence 01110011 123444443344444432 11 11245667778999999999999 776
Q ss_pred -CccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 294 -LKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 294 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
+.+..+ ..+.++|+.++. +++..| +++||.+.++ + ||++.+ .+++++++++++|+++++.
T Consensus 344 ~~~~~~p----~gg~f~~~~l~~-----~~~~~L-~~~gV~v~p~------~--Ris~a~-~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 344 DWNVYKK----QRGLFSFVPLLA-----KIAEHL-KTHHIYIINN------G--RINVSG-ITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp CGGGGSS----CCSSEEECGGGG-----GGTTTT-TTTTEECCTT------S--EEEGGG-CCTTHHHHHHHHHHHHHHC
T ss_pred CCccccC----CceEEEecCCCH-----HHHHHH-HHCCEeecCC------C--eEEEec-cCHHHHHHHHHHHHHHHhh
Confidence 344443 345677766642 334667 6679998864 2 997654 7899999999999999864
No 206
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.93 E-value=1.1e-25 Score=213.61 Aligned_cols=282 Identities=12% Similarity=0.004 Sum_probs=197.8
Q ss_pred HHHHHHHHHHhcC-----CCCceEEecCChhHHHHHHHhccCCCCC----eEEEEcCCcchHHHHHHHHHcCCcEEEEeC
Q 015729 45 KTLLEDIKKIFKT-----TSGTPFLIPTTGTGAWESALTNTLSPGD----RIISFLIGQFSLLWIDQQQRLNFNVDVVES 115 (401)
Q Consensus 45 ~~l~~~la~~~g~-----~~~~~i~~~~g~t~a~~~~~~~~~~~gd----~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 115 (401)
.++|+.++++++. ++++++++|+|+++|+..++.+++++|| +|++++|+|.++. ..++..|++++.++.
T Consensus 71 ~~lr~aia~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~--~~~~~~g~~~~~~~~ 148 (391)
T 3bwn_A 71 PELEDAIKDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYV--EETTYVRSGMYKWEG 148 (391)
T ss_dssp HHHHHHHHHHHHHHCSBCCSSSEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHH--HHHHTTCBTTEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHH--HHHHHcCCeEEEecC
Confidence 7899999998873 2334699999999999999999899999 9999999887654 567788999988887
Q ss_pred CCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhh-cCCCcEEEEecccccCc-ceeccCcccce
Q 015729 116 DWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDE-YRHPALFLVDGVSSICA-IDFRMDEWGID 193 (401)
Q Consensus 116 ~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~-~~~~~~li~D~a~~~~~-~~~~~~~~~~d 193 (401)
+.++ ++ . ++++++++++|+||||.+++ +| |++ ++++++||+|++|..+. .++.. ..+.+
T Consensus 149 d~~~-l~--------~----~~~k~v~l~~p~NPtG~~~~--~l---~~~~~~~~~~ii~De~y~~~~~~~l~~-~~~~~ 209 (391)
T 3bwn_A 149 DAWG-FD--------K----KGPYIELVTSPNNPDGTIRE--TV---VNRPDDDEAKVIHDFAYYWPHYTPITR-RQDHD 209 (391)
T ss_dssp ESTT-CC--------C----CSCEEEEEESSCTTTCCCCC--CC---C-----CCCEEEEECTTCSTTTSCCCC-CBCCS
T ss_pred CHHH-cC--------C----CCCEEEEECCCCCCCchhHH--HH---HHHhhcCCCEEEEeCCCCCCCCCcccc-CCCCe
Confidence 6432 22 1 36799999999999999996 44 443 33559999999997532 12221 34578
Q ss_pred EEEecCCCcccCCCc--ceEEEe-cHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHH---
Q 015729 194 VALTGSQKALSLPTG--MGIVCA-SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIF--- 267 (401)
Q Consensus 194 i~~~s~~K~l~g~~g--~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~--- 267 (401)
+++.|.||++ +.+| +|++++ ++++.+.+... .... .++++.....++.++++...
T Consensus 210 i~~~S~SK~~-g~~GlRiG~~~~~~~~l~~~l~~~-------------~~~~-----~~~~~~~~q~a~~~~l~~~~~~~ 270 (391)
T 3bwn_A 210 IMLFTFSKIT-GHAGSRIGWALVKDKEVAKKMVEY-------------IIVN-----SIGVSKESQVRTAKILNVLKETC 270 (391)
T ss_dssp EEEEEHHHHH-SCGGGCEEEEEECCHHHHHHHHHH-------------HHHH-----HSSCCHHHHHHHHHHHHHHHHHT
T ss_pred EEEEechhhc-CCCccceEEEEecCHHHHHHHHHH-------------hccc-----ccCCCHHHHHHHHHHHhCcchhc
Confidence 9999999988 4555 599997 78877666432 1110 11355555555666665432
Q ss_pred ------HhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCcc---------CCceeEEEEcCCCCCHHHHHHHHHhhCC
Q 015729 268 ------EEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEW---------FSDTVTAVIVPSHINSSEIVRRAWQRYN 331 (401)
Q Consensus 268 ------~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 331 (401)
+..+++.+++++++++.+.+.|+++ ++.+..+.+.. ..+.++++.+++. ..+...|. +.|
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~---~~~~~~l~-~~g 346 (391)
T 3bwn_A 271 KSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEE---TDLVSELR-RHK 346 (391)
T ss_dssp TCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESSS---CCHHHHHH-HTT
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccCCCcceEEEecCCcH---HHHHHHHH-HCC
Confidence 2347788899999999999999987 55554332211 1234678888642 34555554 459
Q ss_pred eEEccCCCCC-CCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 332 LSLGLGLNKV-AGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 332 i~v~~g~~~~-~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
|.+.+|..+. ..+++||++.. +++++++++++|++++++
T Consensus 347 V~v~pg~~fg~~~~~iRis~~~--~~e~i~~~~~~L~~~~~~ 386 (391)
T 3bwn_A 347 VMSRAGERCGSDKKHVRVSMLS--REDVFNVFLERLANMKLI 386 (391)
T ss_dssp EECEEGGGGTCCTTEEEEESCS--CHHHHHHHHHHHHSCC--
T ss_pred EEEccCCCCCCCCCEEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 9999985543 25789998774 899999999999887653
No 207
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.93 E-value=2.2e-24 Score=207.81 Aligned_cols=330 Identities=17% Similarity=0.135 Sum_probs=215.6
Q ss_pred CChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc---------CCCCCeEEE
Q 015729 19 HIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT---------LSPGDRIIS 89 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~---------~~~gd~vl~ 89 (401)
.+++++++++.+...... +.......++++.+++++|.+ .+++++|||+|+..++.++ +++||+|++
T Consensus 40 ~~~~~~~~a~~~~~~~~~-~~~~~~~~~l~~~la~~~g~~---~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~ 115 (437)
T 3bb8_A 40 VIGTKELQLMVEASLDGW-LTTGRFNDAFEKKLGEYLGVP---YVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVIT 115 (437)
T ss_dssp CCCHHHHHHHHHHHHHCC-CBSCHHHHHHHHHHHHHHTCS---EEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEE
T ss_pred CCCHHHHHHHHHHHHcCC-cCCChHHHHHHHHHHHHHCCC---cEEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEE
Confidence 445667777766432211 223457889999999999986 2788899999999998887 789999999
Q ss_pred EcCCcchHHHHHHHHHcCCcEEEEeCCC-CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCC
Q 015729 90 FLIGQFSLLWIDQQQRLNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRH 168 (401)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~ 168 (401)
+.++|+++. ..++..|++++.++.++ ++.+|++++++++++ ++++|++++ ++|...++++|.++|++ +
T Consensus 116 ~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~----~~~~v~~~~---~~g~~~~~~~i~~l~~~--~ 184 (437)
T 3bb8_A 116 VAAGFPTTV--NPTIQNGLIPVFVDVDIPTYNVNASLIEAAVSD----KTKAIMIAH---TLGNLFDLAEVRRVADK--Y 184 (437)
T ss_dssp CSSSCHHHH--HHHHHTTCEEEECCEETTTTEECGGGHHHHCCT----TEEEEEEEC---GGGCCCCHHHHHHHHHH--H
T ss_pred CCCCcHHHH--HHHHHcCCEEEEEeccCccCCcCHHHHHHhcCC----CCeEEEEeC---CCCChhcHHHHHHHHHH--c
Confidence 999888765 34566899999998875 567899999999863 578888885 46777999999999999 9
Q ss_pred CcEEEEecccccCcceeccCccc--ceEEEec--CCCcccCCCcceEEEecHHHHHHh----ccCCCC---c-cc--cch
Q 015729 169 PALFLVDGVSSICAIDFRMDEWG--IDVALTG--SQKALSLPTGMGIVCASPKALEAS----KTAKSV---R-VF--FDW 234 (401)
Q Consensus 169 ~~~li~D~a~~~~~~~~~~~~~~--~di~~~s--~~K~l~g~~g~G~l~~~~~~~~~~----~~~~~~---~-~~--~~~ 234 (401)
|+++|+|++|+.|... +....+ .|++++| ..|.+.++. .|+++.+++.+... ...... . .. ..+
T Consensus 185 ~~~li~D~a~~~g~~~-~~~~~~~~~d~~~~s~~~~k~l~~g~-gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (437)
T 3bb8_A 185 NLWLIEDCCDALGSTY-DGKMAGTFGDIGTVSFYPAKHITMGE-GGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCK 262 (437)
T ss_dssp TCEEEEECTTCTTCEE-TTEETTSSSSEEEEECSTTSSSCCSS-CEEEEESCHHHHHHHHHHHBTTBCC-----------
T ss_pred CCEEEEECccccCceE-CCeecccccCEEEEECcCCcCCCCCC-eEEEEeCCHHHHHHHHHHHHhCcccccccccccccc
Confidence 9999999999987654 444444 6776665 345565444 48888886654432 111100 0 00 000
Q ss_pred HHHHH-------Hh-hcCCC--CCCC--CcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCC
Q 015729 235 KDYIK-------FY-NLGTF--WPYT--PSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKE 301 (401)
Q Consensus 235 ~~~~~-------~~-~~g~~--~~~~--~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 301 (401)
..+.. .+ ..++. .+++ .+....+...++++. ++...++.+++.+++.+.|+++ |+.+.....
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 337 (437)
T 3bb8_A 263 KRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLER-----IEEFVEKRKANFKYLKDALQSCADFIELPEAT 337 (437)
T ss_dssp -----CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHGGGGTTTEECCCCC
T ss_pred cccccccccccccccccccccccCcccCCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhhccCCccccCCCC
Confidence 00000 00 11100 0111 223222222333332 2445566688888999999887 765543211
Q ss_pred -ccC-C--ceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC-------C-----------------CcEEEEeeccc
Q 015729 302 -EWF-S--DTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV-------A-----------------GKVFRIGHLGH 353 (401)
Q Consensus 302 -~~~-~--~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~-------~-----------------~~~~Ri~~~~~ 353 (401)
... + ...+.+..+.+.+..++.+.|.++ ||.++.++.+. . .+.+|++++..
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~ 416 (437)
T 3bb8_A 338 ENSDPSWFGFPITLKEDSGVSRIDLVKFLDEA-KVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGIYPG 416 (437)
T ss_dssp TTEECCCSSEEEEECGGGSSCHHHHHHHHHHT-TBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECCSTT
T ss_pred CCCceeeEEEEEEECCcCcCcHHHHHHHHHHC-CCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEEEecCCCC
Confidence 111 1 223334443356788999999876 99988775410 0 12499999999
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 015729 354 LNELQLLGCLAGVEMILK 371 (401)
Q Consensus 354 ~~~~di~~~~~~i~~~l~ 371 (401)
+|++|+++++++|+++++
T Consensus 417 ~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 417 LTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp CCHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHc
Confidence 999999999999988764
No 208
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.93 E-value=1.3e-24 Score=206.13 Aligned_cols=283 Identities=13% Similarity=0.086 Sum_probs=200.3
Q ss_pred HHHHHHHccCcCC------CCCccH-HHHHHHHHHHHHHHhcCCCCceEEe--cCChhHHHHHHHhccCCCCCeEEEEc-
Q 015729 22 DQVIRAMNRNNED------YRSPAV-PALTKTLLEDIKKIFKTTSGTPFLI--PTTGTGAWESALTNTLSPGDRIISFL- 91 (401)
Q Consensus 22 ~~v~~a~~~~~~~------~~~~~~-~~~~~~l~~~la~~~g~~~~~~i~~--~~g~t~a~~~~~~~~~~~gd~vl~~~- 91 (401)
.+|++++.+.... ..++.+ .....++++.+++++|.+.. +++ ++||++|+..++.+++++||+|+++.
T Consensus 32 ~~vl~a~~~~~~~~~~~~~~~~~~y~~~~~~~Le~~lA~l~g~e~a--lv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~ 109 (409)
T 3jzl_A 32 AKVLDAFQENKVSDFHFHPSTGYGYDDEGRDTLERVYATVFKTEAA--LVRPQIISGTHAISTVLFGILRPDDELLYITG 109 (409)
T ss_dssp HHHHHHHHHTTCCGGGGCCCCTTCTTCHHHHHHHHHHHHHHTCSEE--EEETTSCSHHHHHHHHHHHHCCTTCEEEECSS
T ss_pred HHHHHHHHHhhhhhhccCCCcCCCCChhHHHHHHHHHHHHhCCCcE--EEECCCccHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 4577777764311 111111 23477899999999998652 333 88999999999999999999999998
Q ss_pred CCcchHH-HH-------HHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEe----cCCCcccccchHHH
Q 015729 92 IGQFSLL-WI-------DQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVH----NETATGVTNNLSKV 159 (401)
Q Consensus 92 ~~~~~~~-~~-------~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~----~~n~tG~~~~l~~i 159 (401)
+.|.+.. .. ..++..|++++.++.++++.+|++++++++++ ++++|++++ ++||+|.+.|+++|
T Consensus 110 ~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~----~tklV~i~~s~g~p~nptg~v~~l~~I 185 (409)
T 3jzl_A 110 QPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMTP----KTKMIGIQRSRGYADRPSFTIEKIKEM 185 (409)
T ss_dssp SCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCCT----TEEEEEEECSCTTSSSCCCCHHHHHHH
T ss_pred CCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHHhccC----CCeEEEEECCCCCCCCCcCccccHHHH
Confidence 7665543 11 23466799999999988888999999999873 679999999 99999999999999
Q ss_pred HHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCC--CcceEEEecHHHHHHhccCCCCccccchHHH
Q 015729 160 RKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLP--TGMGIVCASPKALEASKTAKSVRVFFDWKDY 237 (401)
Q Consensus 160 ~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~--~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (401)
.++|+++++|+++++|++|+.+....+....++|++++|.||+++++ ...|++++++++++++.........
T Consensus 186 ~~la~~~~~~~~livD~a~~~~~~~~~p~~~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~------ 259 (409)
T 3jzl_A 186 IVFVKNINPEVIVFVDNCYGEFVEYQEPPEVGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGI------ 259 (409)
T ss_dssp HHHHHHHCTTCEEEEECTTCTTTSSCCSGGGTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTT------
T ss_pred HHHHHhhCCCCEEEEeCCcccccccCCccccCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhccccc------
Confidence 99999977899999999998765333445568999999999999754 2239999999998877542110000
Q ss_pred HHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCC
Q 015729 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHI 317 (401)
Q Consensus 238 ~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 317 (401)
....+. +... +.++++.+.. ....+++..++++++++.|+++|+++.+.....+...++.|.+++..
T Consensus 260 --g~~~g~----~~~~-----~~~~l~gl~~--~~~r~~~~~~~a~~la~~L~~~g~~v~p~~~~~~~~~i~~i~l~~~~ 326 (409)
T 3jzl_A 260 --GREAGA----SLYS-----LLEMYQGFFL--APHVTAQAIKGARFTAAMLAEFGVEADPVWDAPRTDLIQSVSFHNKE 326 (409)
T ss_dssp --GGGCCC----CTTC-----HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTCEEESCTTSCCSSSCCEEECSCHH
T ss_pred --cccccc----cHHH-----HHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCccEEEEEEeCCHH
Confidence 001111 1111 1223333322 34578888999999999999998877443222234457778885433
Q ss_pred CHHHHHHHHHhh
Q 015729 318 NSSEIVRRAWQR 329 (401)
Q Consensus 318 ~~~~l~~~L~~~ 329 (401)
...++++.|...
T Consensus 327 ~~~~~~~~L~~~ 338 (409)
T 3jzl_A 327 KMVAFAQAIQAA 338 (409)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhc
Confidence 455677888654
No 209
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.93 E-value=1.4e-24 Score=206.00 Aligned_cols=287 Identities=13% Similarity=0.079 Sum_probs=197.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (401)
.....++++.+++++|.+ + .+++++|++|++.++. ++++||+|+++.+.|++.. +...++..|++++.++.+
T Consensus 54 ~~~~~~lr~~la~~~g~~--~-~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-- 127 (393)
T 1n8p_A 54 NPNRENLERAVAALENAQ--Y-GLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDL-- 127 (393)
T ss_dssp CHHHHHHHHHHHHHTTCS--E-EEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSH--
T ss_pred ChhHHHHHHHHHHHhCCC--c-EEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCC--
Confidence 456889999999999986 2 5666667999999999 8999999999999877654 222456679999999865
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCC----CcEEEEecccccCcceeccCcccceE
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRH----PALFLVDGVSSICAIDFRMDEWGIDV 194 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~----~~~li~D~a~~~~~~~~~~~~~~~di 194 (401)
| +++++++++ ++++|++++++||+|.+.|+++|.++|++ + |+++|+|++|+.+... +....++|+
T Consensus 128 ---d-~~l~~~i~~----~t~lv~~~~~~nptG~~~~l~~i~~la~~--~~~~~~~~livD~a~~~~~~~-~~~~~~~di 196 (393)
T 1n8p_A 128 ---L-NDLPQLIKE----NTKLVWIETPTNPTLKVTDIQKVADLIKK--HAAGQDVILVVDNTFLSPYIS-NPLNFGADI 196 (393)
T ss_dssp ---H-HHHHHHSCS----SEEEEEECSSCTTTCCCCCHHHHHHHHHH--HTTTTTCEEEEECTTTHHHHC-CGGGGTCSE
T ss_pred ---h-HHHHHhccc----CceEEEEECCCCCcceecCHHHHHHHHHH--hCCCCCCEEEEeCCccccccC-CHHHcCCeE
Confidence 7 889988863 57999999999999999999999999999 8 9999999999876543 444567999
Q ss_pred EEecCCCcccCCCc--c-eEEEec-HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhc
Q 015729 195 ALTGSQKALSLPTG--M-GIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG 270 (401)
Q Consensus 195 ~~~s~~K~l~g~~g--~-G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g 270 (401)
+++|.||+++ +.| + |+++++ +++++.+... .. ..| .+.+....+.+..+++ .
T Consensus 197 ~~~S~sK~~g-~~G~rigG~~~~~~~~~~~~l~~~-------------~~-~~g----~~~~~~~~~~~~~~l~-----~ 252 (393)
T 1n8p_A 197 VVHSATKYIN-GHSDVVLGVLATNNKPLYERLQFL-------------QN-AIG----AIPSPFDAWLTHRGLK-----T 252 (393)
T ss_dssp EEEETTTTTT-CSSCCCCEEEEESCHHHHHHHHHH-------------HH-HHC----CCCCHHHHHHHHHHHT-----T
T ss_pred EEEECccccc-CCCCceeEEEEeCCHHHHHHHHHH-------------HH-hcC----CCCCHHHHHHHHhccc-----h
Confidence 9999999884 655 5 899985 6776665421 00 012 1244433333333333 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcC--Cc-cccC----CCc--------cC-C-ceeEEEEcCCC-CCHHHHHHHHHhhCCe
Q 015729 271 LENVIERHRRLGKATRLAVEAWG--LK-NCTQ----KEE--------WF-S-DTVTAVIVPSH-INSSEIVRRAWQRYNL 332 (401)
Q Consensus 271 ~~~~~~~~~~~~~~l~~~L~~~g--~~-~~~~----~~~--------~~-~-~~~~~~~~~~~-~~~~~l~~~L~~~~~i 332 (401)
+....++..++.+.+.+.|++.. +. +..+ .+. .. . +.+++|.++.. .+...+...|. ..++
T Consensus 253 ~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~l~~l~-~~~~ 331 (393)
T 1n8p_A 253 LHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTR-LFTL 331 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHHHHHCS-SSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHHHhhCC-cceE
Confidence 34556666777778888887642 21 1111 000 01 3 56888998532 12333444332 2234
Q ss_pred EEccCC------------C-----------CCCCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 333 SLGLGL------------N-----------KVAGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 333 ~v~~g~------------~-----------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
.+..|. + ....+.+|+|+....++++++.+.++|+++
T Consensus 332 ~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 332 AESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp CSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 333331 0 011367999998888899999999888765
No 210
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.93 E-value=2.7e-24 Score=205.51 Aligned_cols=299 Identities=13% Similarity=0.074 Sum_probs=197.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (401)
.....++++.+++++|.+. .+++++|++|+..++.+++++||+|+++.+.|++.. +...++..|++++.++.+
T Consensus 81 ~p~~~~le~~lA~l~g~~~---~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~-- 155 (430)
T 3ri6_A 81 NPTVEDLEQRLKNLTGALG---VLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVM-- 155 (430)
T ss_dssp CHHHHHHHHHHHHHHTCSE---EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTT--
T ss_pred CHHHHHHHHHHHHHHCCCc---EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC--
Confidence 4567899999999999865 566778899999999999999999999999888765 223677889999999876
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEec
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s 198 (401)
|++++++++++ ++++|++++++||+|.+.|+++|.++|++ +|+++|+|++++.+.. .+....++|+++.|
T Consensus 156 ---d~~~l~~ai~~----~t~~v~~e~p~NptG~~~dl~~i~~la~~--~g~~livD~a~~~~~~-~~~~~~g~div~~S 225 (430)
T 3ri6_A 156 ---DSLAVEHACDE----TTKLLFLETISNPQLQVADLEALSKVVHA--KGIPLVVDTTMTPPYL-LEAKRLGVDIEVLS 225 (430)
T ss_dssp ---CHHHHHHHCCT----TEEEEEEESSCTTTCCCCCHHHHHHHHHT--TTCCEEEECTTSCTTT-CCGGGGTCSEEEEE
T ss_pred ---CHHHHHHhhCC----CCeEEEEECCCCCCCeecCHHHHHHHHHH--cCCEEEEECCCccccc-CChHHcCCEEEEEC
Confidence 89999999874 67999999999999999999999999999 9999999999987765 44556789999999
Q ss_pred CCCcccCCC-c-ceEEEecHHH-HHHhccCCCCcc---c--cchHHHHH---HhhcCCCCCCCCcHHHHHHHHHHHHHHH
Q 015729 199 SQKALSLPT-G-MGIVCASPKA-LEASKTAKSVRV---F--FDWKDYIK---FYNLGTFWPYTPSIQLLYGLRAALDLIF 267 (401)
Q Consensus 199 ~~K~l~g~~-g-~G~l~~~~~~-~~~~~~~~~~~~---~--~~~~~~~~---~~~~g~~~~~~~~~~~~~a~~~al~~~~ 267 (401)
.+|+++|+. + .|+++.+.+. +.. ..+.... + ..+..... ....| .+.+...++.+...++
T Consensus 226 ~sK~l~g~g~~~gG~vv~~~~~~~~~--~~~~~~l~~~~g~~~~i~~~~~~~~~~~g----~~~~~~~a~l~l~~l~--- 296 (430)
T 3ri6_A 226 STKFISGGGTSVGGVLIDHGLFEWKS--LPSLAPYYAKAGPMAFLYKARKEVFQNLG----PSLSPHNAYLQSLGLE--- 296 (430)
T ss_dssp CCCEEETTEEECCEEEEECSCSCGGG--STTTHHHHHHHGGGHHHHHHHHTHHHHHC----CCCCHHHHHHHHHHHH---
T ss_pred CcccccCCCCceEEEEEECChHHhhh--ccchhhhhhhhchhhHHHHHHHHHHHhcC----CCCCHHHHHHHHhhhh---
Confidence 999997641 1 2666643321 100 0000000 0 00000000 01112 2344433322222222
Q ss_pred HhcHHHHHHHHHHHHHHHHHHHHHc-CCcc-ccCC-Ccc----------CCce-eEEEEcCCCCCHHHHHHHHHhhCCeE
Q 015729 268 EEGLENVIERHRRLGKATRLAVEAW-GLKN-CTQK-EEW----------FSDT-VTAVIVPSHINSSEIVRRAWQRYNLS 333 (401)
Q Consensus 268 ~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~-~~~----------~~~~-~~~~~~~~~~~~~~l~~~L~~~~~i~ 333 (401)
.+....++..++++.+.+.|++. ++.. ..+. ++. ..+. +++|++++..++.++.+.|. .+++.
T Consensus 297 --~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~~~~~~~~~~l~-~~~~~ 373 (430)
T 3ri6_A 297 --TMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESKEASYRFMDALK-LIRRA 373 (430)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSHHHHHHHHHHCS-SSEEC
T ss_pred --hHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCHHHHHHHHHhCC-cceec
Confidence 24556777889999999999875 5442 2221 000 1134 89999962222334444442 23444
Q ss_pred EccCCC-----------------------CCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 334 LGLGLN-----------------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 334 v~~g~~-----------------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
+..|.. ...++.+|+|+. .|+.+.+++.|+.+|
T Consensus 374 ~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG----~E~~~dl~~dl~~al 429 (430)
T 3ri6_A 374 TNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVG----IEEIEDLKEDILQAL 429 (430)
T ss_dssp SCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECC----SSCHHHHHHHHHHHH
T ss_pred CCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHhh
Confidence 444421 123567999864 467777777777665
No 211
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.93 E-value=7.3e-24 Score=201.53 Aligned_cols=282 Identities=15% Similarity=0.146 Sum_probs=197.5
Q ss_pred HHHHHHHccCcCC------CCCccH-HHHHHHHHHHHHHHhcCCCCceEEe---cCChhHHHHHHHhccCCCCCeEEEEc
Q 015729 22 DQVIRAMNRNNED------YRSPAV-PALTKTLLEDIKKIFKTTSGTPFLI---PTTGTGAWESALTNTLSPGDRIISFL 91 (401)
Q Consensus 22 ~~v~~a~~~~~~~------~~~~~~-~~~~~~l~~~la~~~g~~~~~~i~~---~~g~t~a~~~~~~~~~~~gd~vl~~~ 91 (401)
++|++++.+.... ..++.+ .....++++.+++++|.+. .++ ++||++|+..++.++++|||+|++.+
T Consensus 47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~g~~~Le~~lA~l~g~e~---alv~p~~~sGt~A~~~al~all~pGD~Vl~~~ 123 (427)
T 3hvy_A 47 LKVLKAFQEERISESHFTNSSGYGYNDIGRDSLDRVYANIFNTES---AFVRPHFVNGTHAIGAALFGNLRPNDTMMSIC 123 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHHTCSE---EEEETTCCSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred HHHHHHHHHHHHHHHhcccCcCCCCCchhHHHHHHHHHHHhCCCc---eEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeC
Confidence 5677887774211 111211 2247889999999999876 344 78999999999999999999999998
Q ss_pred -CCcchHH-HH--------HHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEe----cCCCcccccchH
Q 015729 92 -IGQFSLL-WI--------DQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVH----NETATGVTNNLS 157 (401)
Q Consensus 92 -~~~~~~~-~~--------~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~----~~n~tG~~~~l~ 157 (401)
+.|.+.. +. ..++..|++++.++. .++.+|++++++++++. +++|+|++++ ++||+|.+.|++
T Consensus 124 ~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~-~~~~~d~e~l~~~i~~~--~~tklV~i~~s~gyp~nptg~v~dl~ 200 (427)
T 3hvy_A 124 GMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL-KDGKVDINTVKEELKKD--DSIKLIHIQRSTGYGWRKSLRIAEIA 200 (427)
T ss_dssp SSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC-BTTBCCHHHHHHHHHHC--TTEEEEEEESSCCSSSSCCCCHHHHH
T ss_pred CCCchhHHHHhccccchhhhHHHHcCCEEEEecC-CCCCcCHHHHHHHhhCC--CCCEEEEEECCCCCCCCccccHHHHH
Confidence 7666543 11 234567999999998 56779999999999841 2579999999 999999999999
Q ss_pred HHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCC--CcceEEEecHHHHHHhccCCCCccccchH
Q 015729 158 KVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLP--TGMGIVCASPKALEASKTAKSVRVFFDWK 235 (401)
Q Consensus 158 ~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~--~g~G~l~~~~~~~~~~~~~~~~~~~~~~~ 235 (401)
+|.++|+++++|+++++|++|+.+.........++|++++|.||++++. +..|++++++++++++........
T Consensus 201 ~i~~ia~~~~~g~~livD~a~~~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~~~~----- 275 (427)
T 3hvy_A 201 EIIKSIREVNENVIVFVDNCYGEFVEEKEPTDVGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRVTVPG----- 275 (427)
T ss_dssp HHHHHHHHHCSSSEEEEECTTCTTTSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTT-----
T ss_pred HHHHHHHHhCCCCEEEEECCccccccCCCCcccCCeEEEECCcccccccccceEEEEEECHHHHHHHHHHhhcCC-----
Confidence 9999999966799999999998776333444567999999999999762 223999999999887764210000
Q ss_pred HHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCC
Q 015729 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS 315 (401)
Q Consensus 236 ~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 315 (401)
.|. ...++.. .+..+++.+.. ....+++..+++..+++.|+++|+++.+.....+...++.|.+.+
T Consensus 276 -------~g~--~~~~~~~---~a~~~~~gl~~--~~~r~~~~~~~a~~la~~L~~~g~~V~p~~~~~~~~li~~~~l~~ 341 (427)
T 3hvy_A 276 -------IGG--ECGSTFG---VMRSLYEGLFM--APHVTIEAVKGAVFCARIMELAGFDVLPKYNDKRTDIIQAIKFND 341 (427)
T ss_dssp -------TGG--GCCCCTT---CHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTCEEESCTTSCCSSSEEEEECSS
T ss_pred -------ccc--ccCCCHH---HHHHHHHhHhH--HHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCCceEEEEEeCCC
Confidence 010 0112111 11223332222 245788889999999999999988774432222334477788843
Q ss_pred CCCHHHHHHHHHh
Q 015729 316 HINSSEIVRRAWQ 328 (401)
Q Consensus 316 ~~~~~~l~~~L~~ 328 (401)
.....++++.|..
T Consensus 342 ~~~~~~f~~~l~~ 354 (427)
T 3hvy_A 342 EKKLIDFIKGIQT 354 (427)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc
Confidence 2234467777754
No 212
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.93 E-value=6.6e-24 Score=201.80 Aligned_cols=285 Identities=15% Similarity=0.127 Sum_probs=200.9
Q ss_pred HHHHHHHccCcC------CCCCcc-HHHHHHHHHHHHHHHhcCCCCceEEe--cCChhHHHHHHHhccCCCCCeEEEEc-
Q 015729 22 DQVIRAMNRNNE------DYRSPA-VPALTKTLLEDIKKIFKTTSGTPFLI--PTTGTGAWESALTNTLSPGDRIISFL- 91 (401)
Q Consensus 22 ~~v~~a~~~~~~------~~~~~~-~~~~~~~l~~~la~~~g~~~~~~i~~--~~g~t~a~~~~~~~~~~~gd~vl~~~- 91 (401)
++|++++.+... ...++. ......++++.+++++|.+.. +++ ++||++|+..++.++++|||+|++.+
T Consensus 46 ~~Vl~A~~~~~~~~~~~~~~~gy~y~~~~~~~Le~~lA~l~g~e~a--lv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~ 123 (427)
T 3i16_A 46 LKVLNAFQEERISEAHFTNSSGYGYGDIGRDSLDAVYARVFNTESA--LVRPHFVNGTHALGAALFGNLRPGNTMLSVCG 123 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHHTCSEE--EEETTCCSHHHHHHHHHHHHCCTTCEEEESSS
T ss_pred HHHHHHHHHhchhHHhcCCCCCCCCCHHHHHHHHHHHHHHhCCcce--EEeCCCccHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 568888865321 111121 123478899999999998752 443 78999999999999999999999998
Q ss_pred CCcchHH-HH--------HHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEe----cCCCcccccchHH
Q 015729 92 IGQFSLL-WI--------DQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVH----NETATGVTNNLSK 158 (401)
Q Consensus 92 ~~~~~~~-~~--------~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~----~~n~tG~~~~l~~ 158 (401)
+.|.+.. .. ..++..|++++.++.++++.+|++++++++++. +++++|++++ ++||+|.+.|+++
T Consensus 124 ~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~--~~tklV~i~~s~~~p~nptg~i~dl~~ 201 (427)
T 3i16_A 124 EPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKED--ESITLVHIQRSTGYGWRRALLIEDIKS 201 (427)
T ss_dssp SCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTC--TTEEEEEEECSCCSSSSCCCCHHHHHH
T ss_pred CccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCC--CCCEEEEEEcCCCCCCCCcccHHHHHH
Confidence 7666554 21 334667999999999888889999999999731 2579999999 9999999999999
Q ss_pred HHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCC--CcceEEEecHHHHHHhccCCCCccccchHH
Q 015729 159 VRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLP--TGMGIVCASPKALEASKTAKSVRVFFDWKD 236 (401)
Q Consensus 159 i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~--~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 236 (401)
|.++|+++++|+++++|++|+.+.........++|++++|.||+++++ +..|++++++++++++........
T Consensus 202 i~~la~~~~~g~~livD~a~~~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~------ 275 (427)
T 3i16_A 202 IVDCVKNIRKDIICFVDNCYGEFMDTKEPTDVGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPG------ 275 (427)
T ss_dssp HHHHHHHHCTTSEEEEECTTTTTSSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTT------
T ss_pred HHHHHHHhCCCCEEEEECCCccccccCCccccCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccCc------
Confidence 999999977899999999998776333444568999999999999752 334999999999887764210000
Q ss_pred HHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCC
Q 015729 237 YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSH 316 (401)
Q Consensus 237 ~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~ 316 (401)
+ |. ...++.. +...+++.+.. ....+++..+++..+.+.|+++|+++.+.....+...++.|.+.+.
T Consensus 276 ----~--g~--~~~~~~~---~a~~~l~gl~~--~~~r~~~~~~~a~~la~~L~~~g~~V~p~~~~~~~~~i~~i~l~~~ 342 (427)
T 3i16_A 276 ----I--GG--ECGSTFG---VVRSMYQGLFL--APHISMEALKGAILCSRIMELAGFEVMPKYDEKRSDIIQSIKFNDK 342 (427)
T ss_dssp ----T--GG--GCCCCTT---CHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTCEEESCTTSCCSSSCEEEECSSH
T ss_pred ----c--Cc--cCCccHH---HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCCccEEEEEEECCH
Confidence 0 10 0011110 12333333322 2567888999999999999999887744322223344778888533
Q ss_pred CCHHHHHHHHHhh
Q 015729 317 INSSEIVRRAWQR 329 (401)
Q Consensus 317 ~~~~~l~~~L~~~ 329 (401)
....++++.|...
T Consensus 343 ~~~~~f~~~l~~~ 355 (427)
T 3i16_A 343 DKLIEFCKGIQTG 355 (427)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhc
Confidence 3345677777643
No 213
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.93 E-value=9.6e-25 Score=210.85 Aligned_cols=322 Identities=16% Similarity=0.164 Sum_probs=214.3
Q ss_pred ChHHHH-H-HHcc---CcCC--CCC-ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC---C------
Q 015729 20 IPDQVI-R-AMNR---NNED--YRS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL---S------ 82 (401)
Q Consensus 20 ~~~~v~-~-a~~~---~~~~--~~~-~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~---~------ 82 (401)
.+|.++ + ++.+ .... +.+ ....+...++.+.++++++....+++++++||++|++.++.... +
T Consensus 71 ~~p~v~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~la~~la~~~~~~~~~~v~~~~~gseA~~~aik~a~~~~~~~~~~~ 150 (449)
T 2cjg_A 71 NPPALVDDREFHAELMQAALNKPSNSDVYSVAMARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAH 150 (449)
T ss_dssp SCHHHHTCHHHHHHHHHHHTCCCCTTTCCCHHHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCcccCCHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhccccccc
Confidence 367777 6 6665 3221 211 12345577899999999973333469999999999999885422 2
Q ss_pred -----CCCeEEEEcCCcchHHHH--HH-----HHHcCC-----cEEEEeCCC--CC--------CCChHHHHHHHhccCC
Q 015729 83 -----PGDRIISFLIGQFSLLWI--DQ-----QQRLNF-----NVDVVESDW--GE--------GAKLDVLASKLAADTA 135 (401)
Q Consensus 83 -----~gd~vl~~~~~~~~~~~~--~~-----~~~~g~-----~~~~v~~~~--~~--------~~d~~~le~~~~~~~~ 135 (401)
++|+|++.+++||+.... .. ....+. ++..++.+. .. ..+++++++.+++.+
T Consensus 151 ~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~- 229 (449)
T 2cjg_A 151 GIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRP- 229 (449)
T ss_dssp TSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHST-
T ss_pred ccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhcC-
Confidence 289999999988875421 10 011222 455555543 11 135566999886432
Q ss_pred CCceEEEEEecCCCcccccc----hHHHHHHhhhcCCCcEEEEecccc-cCcc--e--eccCcccceEEEecCCCcccCC
Q 015729 136 HTIKAICIVHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSS-ICAI--D--FRMDEWGIDVALTGSQKALSLP 206 (401)
Q Consensus 136 ~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~-~~~~--~--~~~~~~~~di~~~s~~K~l~g~ 206 (401)
+++++|++++++|++|...+ +++|.++|++ +|+++|+|++|+ ++.. . ++.....+|++++| |++
T Consensus 230 ~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~--~g~lli~DEv~~g~g~~g~~~~~~~~~~~~di~t~s--K~l--- 302 (449)
T 2cjg_A 230 HDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDE--FDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIVAFG--KKT--- 302 (449)
T ss_dssp TTEEEEEECSEETTTTCEECCHHHHHHHHHHHHH--TTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEEC--GGG---
T ss_pred CceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHH--CCcEEEEeccccCCCccCcceeecccCCCceEEEec--Ccc---
Confidence 46788888888899997666 8999999999 999999999998 3211 1 12122356877655 988
Q ss_pred CcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 015729 207 TGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATR 286 (401)
Q Consensus 207 ~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~ 286 (401)
++|++++++++.+.+.+..... ...+ ..++.++..+++..++++.+.++ ...++..++.++++
T Consensus 303 -~iG~~~~~~~~~~~l~~~~~~~-----------~~~~--~t~~~n~~~~~aa~aal~~~~~~---~~~~~~~~~~~~l~ 365 (449)
T 2cjg_A 303 -QVCGVMAGRRVDEVADNVFAVP-----------SRLN--STWGGNLTDMVRARRILEVIEAE---GLFERAVQHGKYLR 365 (449)
T ss_dssp -SSEEEEECGGGGGSTTCTTTST-----------TSSC--CSSSSCHHHHHHHHHHHHHHHHH---THHHHHHHHHHHHH
T ss_pred -cEEEEEECHHHhhhhhhcccCC-----------cccc--cCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHH
Confidence 4799999988766533210000 0001 13446677778888888877664 36677888889999
Q ss_pred HHHHHc--CCcc-ccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHH
Q 015729 287 LAVEAW--GLKN-CTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCL 363 (401)
Q Consensus 287 ~~L~~~--g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~ 363 (401)
+.|+++ +++. ..... ..+.++++.+++..+..++.+.|.++ ||.+.++. .+++|+++...++++|+++++
T Consensus 366 ~~L~~l~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~g----~~~iRi~~~~~~t~e~i~~~l 438 (449)
T 2cjg_A 366 ARLDELAADFPAVVLDPR--GRGLMCAFSLPTTADRDELIRQLWQR-AVIVLPAG----ADTVRFRPPLTVSTAEIDAAI 438 (449)
T ss_dssp HHHHHHHHHSTTTSEEEE--EETTEEEEECSSHHHHHHHHHHHHHT-TEECEEET----TTEEEECCCTTCCHHHHHHHH
T ss_pred HHHHHHHhhCCCceeeEe--eccEEEEEEECChHHHHHHHHHHHHC-CeEEecCC----CCEEEEECCCCCCHHHHHHHH
Confidence 998875 3332 21111 12446677875422456788999865 99988762 478999887788999999999
Q ss_pred HHHHHHHHhc
Q 015729 364 AGVEMILKDV 373 (401)
Q Consensus 364 ~~i~~~l~~~ 373 (401)
++|+++++++
T Consensus 439 ~~l~~~l~~~ 448 (449)
T 2cjg_A 439 AAVRSALPVV 448 (449)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998753
No 214
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.93 E-value=1.5e-24 Score=208.75 Aligned_cols=312 Identities=14% Similarity=0.096 Sum_probs=207.8
Q ss_pred ChHHHHHHHccCcCCCC-CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCC--CCCeEEEEcCCcch
Q 015729 20 IPDQVIRAMNRNNEDYR-SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLS--PGDRIISFLIGQFS 96 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~~~-~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~--~gd~vl~~~~~~~~ 96 (401)
.+|++++++.+...... .....+...+++++++++++ . .+++++++|||+|++.++..... ++++|++.+++|++
T Consensus 72 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~-~~~v~~~~sGsea~~~ai~~a~~~~~~~~vi~~~~~yhg 149 (434)
T 3l44_A 72 AHPHITKAITTAAENGVLYGTPTALEVKFAKMLKEAMP-A-LDKVRFVNSGTEAVMTTIRVARAYTGRTKIMKFAGCYHG 149 (434)
T ss_dssp TCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHHCT-T-CSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCC
T ss_pred CCHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHHHHhCC-C-CCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCC
Confidence 46777777766432211 11234566789999999987 3 34599999999999999876543 67899999998887
Q ss_pred HHHHHHHHHcCC-------------------cEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc--
Q 015729 97 LLWIDQQQRLNF-------------------NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN-- 155 (401)
Q Consensus 97 ~~~~~~~~~~g~-------------------~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~-- 155 (401)
...... ...|. ++..++.+ |++++++++++.. +++++|+++++++++|.+.+
T Consensus 150 ~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~-~~~~~vi~ep~~~~~G~~~~~~ 222 (434)
T 3l44_A 150 HSDLVL-VAAGSGPSTLGTPDSAGVPQSIAQEVITVPFN-----NVETLKEALDKWG-HEVAAILVEPIVGNFGIVEPKP 222 (434)
T ss_dssp SSGGGG-BC-------CCCBSSTTCCHHHHTTEEEECTT-----CHHHHHHHHHHHG-GGEEEEEECSSBCTTSCBCCCT
T ss_pred CcHHHH-hhcCCcccccCCCCcCCCCCcCCCceEecCcc-----cHHHHHHHHHhCC-CCEEEEEEcCCCCCCCCccCCH
Confidence 542110 00111 23333322 8999999997532 35678888888888888887
Q ss_pred --hHHHHHHhhhcCCCcEEEEecccccC---cc-eeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCc
Q 015729 156 --LSKVRKLLDEYRHPALFLVDGVSSIC---AI-DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVR 229 (401)
Q Consensus 156 --l~~i~~l~~~~~~~~~li~D~a~~~~---~~-~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~ 229 (401)
+++|.++|++ +|+++|+|++|... .. ..+.....+|++++| |.++++.++|++++++++++.+.....
T Consensus 223 ~~l~~l~~l~~~--~~illI~DEv~~g~~~g~~~~~~~~~~~~di~t~s--K~~~~G~~iG~~~~~~~i~~~~~~~~~-- 296 (434)
T 3l44_A 223 GFLEKVNELVHE--AGALVIYDEVITAFRFMYGGAQDLLGVTPDLTALG--KVIGGGLPIGAYGGKKEIMEQVAPLGP-- 296 (434)
T ss_dssp THHHHHHHHHHT--TTCEEEEECTTTTTTSSSSCHHHHHTCCCSEEEEE--GGGGTTSSCEEEEECHHHHTTBTTTSS--
T ss_pred HHHHHHHHHHHH--cCCEEEEeccccceeccccHHHHHcCCCCCeeehh--hhhcCCcCeeeEEEcHHHHHhhccCCC--
Confidence 9999999999 99999999999732 11 011122346776665 988777788999999999877654210
Q ss_pred cccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc----CCccccCCCccCC
Q 015729 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW----GLKNCTQKEEWFS 305 (401)
Q Consensus 230 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~ 305 (401)
.. .+ .+++.++..+++..++++.+.++ ...++.+++.+++++.|+++ ++..... ..
T Consensus 297 ~~-----------~~--~t~~~~~~a~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~----~~ 356 (434)
T 3l44_A 297 AY-----------QA--GTMAGNPASMASGIACLEVLQQE---GLYEKLDELGATLEKGILEQAAKHNIDITLN----RL 356 (434)
T ss_dssp BC-----------CC--CTTTTCHHHHHHHHHHHHHHTST---THHHHHHHHHHHHHHHHHHHHHHTTCCEEEE----EE
T ss_pred cc-----------cC--CCCCcCHHHHHHHHHHHHHHHcc---cHHHHHHHHHHHHHHHHHHHHHhCCCCEEEE----ee
Confidence 00 01 13456777777788888876543 45666777777777777663 3221111 23
Q ss_pred ceeEEEEcCCC-C------------CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 306 DTVTAVIVPSH-I------------NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 306 ~~~~~~~~~~~-~------------~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
+.++++.+.+. . ...++.+.|.++ ||.++++.. ..+|+++ ..|++|+++++++|++++++
T Consensus 357 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~----~~~rl~~--~~t~e~i~~~l~~l~~~l~~ 429 (434)
T 3l44_A 357 KGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQE-GVNLAPSKY----EAWFLTT--EHTKEDIEYTIEAVGRAFAA 429 (434)
T ss_dssp TTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHT-TEECCSSTT----CCEECCT--TCCHHHHHHHHHHHHHHHHH
T ss_pred ccEEEEEEecCcccchhhccccCHHHHHHHHHHHHHC-CeEEeecCC----CcEEEec--ccCHHHHHHHHHHHHHHHHH
Confidence 34666666221 1 125688888876 999987632 4678853 46999999999999999876
Q ss_pred c
Q 015729 373 V 373 (401)
Q Consensus 373 ~ 373 (401)
+
T Consensus 430 ~ 430 (434)
T 3l44_A 430 L 430 (434)
T ss_dssp H
T ss_pred H
Confidence 4
No 215
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.93 E-value=4.9e-25 Score=214.18 Aligned_cols=306 Identities=12% Similarity=0.081 Sum_probs=194.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCC-----C----CeEEEEcCCcchHHHHHHHHHcCCcEE
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSP-----G----DRIISFLIGQFSLLWIDQQQRLNFNVD 111 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~-----g----d~vl~~~~~~~~~~~~~~~~~~g~~~~ 111 (401)
.....++++.++++++.+ .+++++|||+|++.++.++.++ | |+|++. ..|+... .......|+.+.
T Consensus 73 ~~~~~~l~~~la~~~~~~---~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~Ii~~-~~h~~t~-~~~~~~~~~~~~ 147 (467)
T 2oqx_A 73 SRSYYALAESVKNIFGYQ---YTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFS-NYFFDTT-QGHSQINGCTVR 147 (467)
T ss_dssp CHHHHHHHHHHHHHHCCS---EEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEE-SSCCHHH-HHHHHHTTCEEE
T ss_pred CchhHHHHHHHHHHhCcC---cEEEcCCcHHHHHHHHHHHhccccccCCCCccceEEec-ccccccc-hhhhhccCccee
Confidence 456779999999999874 4999999999999999887777 8 887766 5454432 233444566554
Q ss_pred EEe------CC----CCCCCChHHHHHHHhccCCCCceEEEEEecCCCc-ccccc---hHHHHHHhhhcCCCcEEEEecc
Q 015729 112 VVE------SD----WGEGAKLDVLASKLAADTAHTIKAICIVHNETAT-GVTNN---LSKVRKLLDEYRHPALFLVDGV 177 (401)
Q Consensus 112 ~v~------~~----~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~t-G~~~~---l~~i~~l~~~~~~~~~li~D~a 177 (401)
... .+ .++.+|+++|++++++...+++++|++++++||+ |.+++ +++|.++|++ +|++||+|++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~--~gi~li~D~a 225 (467)
T 2oqx_A 148 NVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKK--YDIPVVMDSA 225 (467)
T ss_dssp ECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHH--TTCCEEEECT
T ss_pred eccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHH--cCCEEEEEch
Confidence 431 12 3456799999999974211257999999999998 77764 7789999999 9999999987
Q ss_pred ccc-Cc----------ceeccCc------ccceEEEecCCCcccCCCcceEEEecHH-HHHHhccCCCCccccchHHHHH
Q 015729 178 SSI-CA----------IDFRMDE------WGIDVALTGSQKALSLPTGMGIVCASPK-ALEASKTAKSVRVFFDWKDYIK 239 (401)
Q Consensus 178 ~~~-~~----------~~~~~~~------~~~di~~~s~~K~l~g~~g~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 239 (401)
|+. +. ...+... ..+|++++|.||+++.+.| |+++.+++ +++.+... ... .
T Consensus 226 ~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~~~~~~~~~~~~---------~~~-~ 294 (467)
T 2oqx_A 226 RFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCMKDDSFFDVYTEC---------RTL-C 294 (467)
T ss_dssp THHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSSC-EEEEECSGGGHHHHHHH---------HHH-H
T ss_pred hhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEecccccCCCCc-eEEEecChhHHHHHHHH---------HHh-h
Confidence 755 21 1111111 2478889999999964445 77887766 33322110 000 0
Q ss_pred HhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCC---
Q 015729 240 FYNLGTFWPYTPSIQLLYGLRAALDLIFEEGL-ENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS--- 315 (401)
Q Consensus 240 ~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~-~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~--- 315 (401)
.+..+....++.+...++++..+++ ..+ +...++..++.+++.+.|+++|+++. +. .+.++++.+++
T Consensus 295 ~~~~~~~~~~~~~~~~~~al~~~l~----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~----~~~~~~~~~~~~~~ 365 (467)
T 2oqx_A 295 VVQEGFPTYGGLEGGAMERLAVGLY----DGMNLDWLAYRIAQVQYLVDGLEEIGVVCQ-QA----GGHAAFVDAGKLLP 365 (467)
T ss_dssp HHTTSSCCCCCCCHHHHHHHHHHHH----HTTCHHHHHHHHHHHHHHHHHHHHTTCCEE-EE----CSSCEEEEHHHHST
T ss_pred hccCCcccccchhhhHHHHHHHhhH----hhhhHHHHHHHHHHHHHHHHHHHHCCCeee-cC----CceEEEEechhhcc
Confidence 0011111112233322222222222 112 23455567888899999988877765 32 23466677631
Q ss_pred CCC-----HHHHHHHH-HhhCCeEEccCCC------C-------CCCcEEEEeeccc-CCHHHHHHHHHHHHHHHHhcC
Q 015729 316 HIN-----SSEIVRRA-WQRYNLSLGLGLN------K-------VAGKVFRIGHLGH-LNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 316 ~~~-----~~~l~~~L-~~~~~i~v~~g~~------~-------~~~~~~Ri~~~~~-~~~~di~~~~~~i~~~l~~~~ 374 (401)
+.+ ..++++.| .++ ||.+.++.. + ...+++|+++... ++++|+++++++|++++++..
T Consensus 366 ~~~~~~~~~~~l~~~L~~~~-gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 366 HIPADQFPAQALACELYKVA-GIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAA 443 (467)
T ss_dssp TSCGGGCHHHHHHHHHHHHH-CEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHSGG
T ss_pred cCCcccccHHHHHHHHHHhc-CceecccccccccccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 233 34458888 555 999887431 1 0126899998877 899999999999999997653
No 216
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.93 E-value=4.2e-24 Score=205.22 Aligned_cols=311 Identities=15% Similarity=0.073 Sum_probs=209.4
Q ss_pred ChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcCCcc
Q 015729 20 IPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIGQF 95 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~~ 95 (401)
.+|.+++++.+.... +..+ ..+...++.+.++++++ + .+++++++||++|++.++.. ....+++|++.+++|+
T Consensus 69 ~~p~v~~a~~~~~~~~~~~~~-~~~~~~~la~~l~~~~~-~-~~~v~~~~ggsea~~~al~~a~~~~~~~~vi~~~~~yh 145 (427)
T 3fq8_A 69 AHPEVIEALKVAMEKGTSFGA-PCALENVLAEMVNDAVP-S-IEMVRFVNSGTEACMAVLRIMRAYTGRDKIIKFEGCYH 145 (427)
T ss_dssp TCHHHHHHHHHHHTTCSCCSS-CCHHHHHHHHHHHHHST-T-CSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCC
T ss_pred CCHHHHHHHHHHHHhCCCcCC-CCHHHHHHHHHHHHhCC-C-CCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcC
Confidence 367777777764432 2222 45677899999999987 3 34699999999999998833 1234578999988887
Q ss_pred hHHHHHH------HHH------cC------CcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc--
Q 015729 96 SLLWIDQ------QQR------LN------FNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN-- 155 (401)
Q Consensus 96 ~~~~~~~------~~~------~g------~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~-- 155 (401)
+...... ... .| ..+..++.+ |++++++++++.+ +++++|+++++++++|.+.+
T Consensus 146 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~-~~~~~vi~~p~~~~~G~~~~~~ 219 (427)
T 3fq8_A 146 GHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYN-----DLEAVKALFAENP-GEIAGVILEPIVGNSGFIVPDA 219 (427)
T ss_dssp CSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETT-----CHHHHHHHHHHST-TTEEEEEECSSBCTTSCBCCCT
T ss_pred CCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCC-----CHHHHHHHHHhCC-CCEEEEEEcCCcCCCCCcCCCH
Confidence 6431100 000 01 123444433 8999999998644 46789999988899999998
Q ss_pred --hHHHHHHhhhcCCCcEEEEecccccC---c-ceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCc
Q 015729 156 --LSKVRKLLDEYRHPALFLVDGVSSIC---A-IDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVR 229 (401)
Q Consensus 156 --l~~i~~l~~~~~~~~~li~D~a~~~~---~-~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~ 229 (401)
+++|.++|++ +|++||+|++|+.. . ...+.....+|+.++| |+++++.++|++++++++++.+.....
T Consensus 220 ~~l~~l~~l~~~--~~~~li~DEv~~g~~~g~~~~~~~~~~~~di~t~s--K~~~~G~~~G~~~~~~~~~~~~~~~~~-- 293 (427)
T 3fq8_A 220 GFLEGLREITLE--HDALLVFDEVITGFRIAYGGVQEKFGVTPDLTTLG--KIIGGGLPVGAYGGKREIMQLVAPAGP-- 293 (427)
T ss_dssp THHHHHHHHHHH--TTCEEEEECTTTBTTTBTTHHHHHTTCCCSEEEEC--GGGGTTSSCEEEEECHHHHTTBTTTSS--
T ss_pred HHHHHHHHHHHH--cCCEEEEeccccccccCcchhhHhcCCCCChhhhh--hhhhCCcceEEEEEcHHHHHhhccCCC--
Confidence 9999999999 99999999999832 1 1112223346776665 999766668999999999887764210
Q ss_pred cccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc----CCccccCCCccCC
Q 015729 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW----GLKNCTQKEEWFS 305 (401)
Q Consensus 230 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~ 305 (401)
.. .+ .+++.++..+++..++++.+.++ ...++.+++.+++++.|+++ ++..... ..
T Consensus 294 ~~-----------~~--~t~~~~~~~~aa~~aal~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~ 353 (427)
T 3fq8_A 294 MY-----------QA--GTLSGNPLAMTAGIKTLELLRQP---GTYEYLDQITKRLSDGLLAIAQETGHAACGG----QV 353 (427)
T ss_dssp BC-----------CC--CTTTTCHHHHHHHHHHHHHHTST---THHHHHHHHHHHHHHHHHHHHHHTTCCCEEE----EE
T ss_pred cc-----------cc--CCCCcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE----Ee
Confidence 00 01 13345777777888888866543 35666777777777777664 2222111 23
Q ss_pred ceeEEEEcCCC-CC------------HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 306 DTVTAVIVPSH-IN------------SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 306 ~~~~~~~~~~~-~~------------~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
+.++++.+++. .. ..++.+.|.++ ||.+.++.. . |+.+....+++|+++++++|++++++
T Consensus 354 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-Gi~v~~~~~----~--r~~~~~~~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 354 SGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQ-GIYLAPSQF----E--AGFTSLAHTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp TTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHT-TEECCSSTT----S--CEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEEecCccccccccccccHHHHHHHHHHHHHC-CcEEecCCC----C--CEEeeCcCCHHHHHHHHHHHHHHHHh
Confidence 45777777532 11 34788888876 999887643 2 44444567999999999999999875
No 217
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.92 E-value=1.4e-24 Score=208.67 Aligned_cols=313 Identities=12% Similarity=0.050 Sum_probs=207.6
Q ss_pred ChHHHHHHHccCcCCCC-CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC--CCCCeEEEEcCCcch
Q 015729 20 IPDQVIRAMNRNNEDYR-SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL--SPGDRIISFLIGQFS 96 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~~~-~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~--~~gd~vl~~~~~~~~ 96 (401)
.+|++++++.+...... .....+...+++++++++++ . .+++++++||++|++.++.... .++++|++.+++||+
T Consensus 70 ~~p~v~~A~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~-~~~v~~~~~Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg 147 (429)
T 3k28_A 70 ANDRVVEALKAVAERGTSFGAPTEIENKLAKLVIERVP-S-IEIVRMVNSGTEATMSALRLARGYTGRNKILKFIGCYHG 147 (429)
T ss_dssp SCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHHST-T-CSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEEETCCCC
T ss_pred CCHHHHHHHHHHHhhCcCcCCCCHHHHHHHHHHHHhCC-C-CCEEEEeCChHHHHHHHHHHHHHhhCCCEEEEECCCcCC
Confidence 46777777766432211 11234567789999999986 2 3459999999999999886644 367889999888876
Q ss_pred HHHHHHHHHcCC-------------------cEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc--
Q 015729 97 LLWIDQQQRLNF-------------------NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN-- 155 (401)
Q Consensus 97 ~~~~~~~~~~g~-------------------~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~-- 155 (401)
..... ....|. +++.++.+ |++++++++++.+ +++++++++.+++++|.+.+
T Consensus 148 ~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~-~~~~~vi~ep~~~~~G~~~~~~ 220 (429)
T 3k28_A 148 HGDSL-LIKAGSGVATLGLPDSPGVPEGVAKNTITVAYN-----DLESVKYAFEQFG-DDIACVIVEPVAGNMGVVPPQP 220 (429)
T ss_dssp SCGGG-CSSCCTTC-----CCCTTCCHHHHTTEEEEETT-----CHHHHHHHHHHHG-GGEEEEEECSSBCTTSCBCCCT
T ss_pred CcHHH-HHhcCCcccccCCCCcCCCCCcccCceeecCCC-----CHHHHHHHHHhCC-CCEEEEEEcCCCCCCCcccCCH
Confidence 54211 111111 23333322 7999999987533 35678888888888898887
Q ss_pred --hHHHHHHhhhcCCCcEEEEecccccCc----ceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCc
Q 015729 156 --LSKVRKLLDEYRHPALFLVDGVSSICA----IDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVR 229 (401)
Q Consensus 156 --l~~i~~l~~~~~~~~~li~D~a~~~~~----~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~ 229 (401)
+++|.++|++ +|+++|+|++|.... ...+.....+|++++| |+++++.++|++++++++++.+.....
T Consensus 221 ~~l~~l~~l~~~--~~~~li~DEv~~g~~~g~~~~~~~~~~~~di~t~s--K~~~~G~~iG~~~~~~~~~~~~~~~~~-- 294 (429)
T 3k28_A 221 GFLEGLREVTEQ--NGALLIFDEVMTGFRVAYNCGQGYYGVTPDLTCLG--KVIGGGLPVGAYGGKAEIMRQVAPSGP-- 294 (429)
T ss_dssp THHHHHHHHHHH--HTCEEEEECTTTTTTSSTTHHHHHHTCCCSEEEEC--GGGGTTSCCEEEEECHHHHTTBTTTSS--
T ss_pred HHHHHHHHHHHH--cCCEEEEeccccccccCcchHHHHhCCCCceehhh--hhhcCCCCeEEEEEcHHHHhhhccCCC--
Confidence 9999999999 999999999997320 0011112346776655 999776778999999998877654211
Q ss_pred cccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCce
Q 015729 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDT 307 (401)
Q Consensus 230 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~ 307 (401)
.. .+ .+++.++..+++..++++... ++..++.+++.+++++.|+++ .+....... ..+.
T Consensus 295 ~~-----------~~--~t~~~~~~a~aaa~aal~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--~~g~ 355 (429)
T 3k28_A 295 IY-----------QA--GTLSGNPLAMAAGYETLVQLT----PESYVEFERKAEMLEAGLRKAAEKHGIPHHIN--RAGS 355 (429)
T ss_dssp BC-----------CC--CTTTTCHHHHHHHHHHHHTCC----HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEE--EETT
T ss_pred cc-----------cc--CCCCCChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEE--eecc
Confidence 00 01 134566666666666666432 567788888888888888774 222211111 2344
Q ss_pred eEEEEcCCCC-------------CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 308 VTAVIVPSHI-------------NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 308 ~~~~~~~~~~-------------~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
++++.+.+.. ...++.+.|+++ ||.+.++. .+.+|+++ ..+++|+++++++|+++++++
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~----~~~~r~~~--~~t~e~i~~~l~~l~~~l~~~ 427 (429)
T 3k28_A 356 MIGIFFTDEPVINYDAAKSSNLQFFAAYYREMVEQ-GVFLPPSQ----FEGLFLST--VHSDADIEATIAAAEIAMSKL 427 (429)
T ss_dssp EEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHHT-TEECCSST----TSCBCCCT--TCCHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEecCCcccccccccccHHHHHHHHHHHHHC-CeEEecCC----CCCEEEEC--CCCHHHHHHHHHHHHHHHHHH
Confidence 6667663211 135788888876 99988762 34578754 569999999999999999865
No 218
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.92 E-value=4.1e-23 Score=198.42 Aligned_cols=312 Identities=12% Similarity=0.018 Sum_probs=204.8
Q ss_pred ChHHHHHHHccCcCCCC-CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc--CCCCCeEEEEcCCcch
Q 015729 20 IPDQVIRAMNRNNEDYR-SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQFS 96 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~~~-~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--~~~gd~vl~~~~~~~~ 96 (401)
.+|++++++.+...... ...+.+...++.++++++++ . .+.+++++||++|++.++... ..++++|++.+++||+
T Consensus 70 ~~p~v~~A~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~-~~~v~~~~sGsea~~~al~~a~~~~~~~~ii~~~~~yhg 147 (429)
T 4e77_A 70 NHPAIRQAVIEAVERGLSFGAPTEMEVKMAQLVTDLVP-T-MDMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHG 147 (429)
T ss_dssp TCHHHHHHHHHHHTTCSCCSSCCHHHHHHHHHHHHHST-T-CSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCC
T ss_pred CCHHHHHHHHHHHHhCcccCCCCHHHHHHHHHHHhhCC-C-CCEEEEeCcHHHHHHHHHHHHHHhhCCCEEEEEcCccCC
Confidence 36778887777543211 11234667789999999987 3 345999999999999988642 2456789999998887
Q ss_pred HHHHHHH-HHcCC-----------------cEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---
Q 015729 97 LLWIDQQ-QRLNF-----------------NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN--- 155 (401)
Q Consensus 97 ~~~~~~~-~~~g~-----------------~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~--- 155 (401)
.....+. ...+. .+..++.+ |++++++++++.. +++++|+++++++++|.+.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~-~~~~~vi~ep~~~~~g~~~~~~~ 221 (429)
T 4e77_A 148 HADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYN-----DLASVRQAFEQYP-QEVACIIVEPVAGNMNCIPPLPE 221 (429)
T ss_dssp ------------------CCCTTSCGGGGTTEEEECTT-----CHHHHHHHHHHST-TTEEEEEECSSBCTTSCBCCCTT
T ss_pred CChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCC-----CHHHHHHHHHhcC-CCEEEEEECCccCCCCCcCCCHH
Confidence 6531111 10111 12222221 8999999998643 35677777766677788877
Q ss_pred -hHHHHHHhhhcCCCcEEEEecccccC---cc-eeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCcc
Q 015729 156 -LSKVRKLLDEYRHPALFLVDGVSSIC---AI-DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRV 230 (401)
Q Consensus 156 -l~~i~~l~~~~~~~~~li~D~a~~~~---~~-~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~ 230 (401)
+++|.++|++ +|+++|+|++|+.. .. ..+.....+|++++| |+++++.++|++++++++++.+..... .
T Consensus 222 ~l~~l~~l~~~--~~~lli~DEv~~g~r~g~~~~~~~~~~~pdi~t~s--K~~~~G~~~G~~~~~~~~~~~l~~~~~--~ 295 (429)
T 4e77_A 222 FLPGLRALCDE--FGALLIIDEVMTGFRVALAGAQDYYHVIPDLTCLG--KIIGGGMPVGAFGGRREVMNALAPTGP--V 295 (429)
T ss_dssp HHHHHHHHHHH--HTCEEEEEETTTBTTTBTTCHHHHTTCCCSEEEEE--GGGGTTSCCEEEEECHHHHTTBTTTSS--B
T ss_pred HHHHHHHHHHH--cCCEEEEeccccCcccCcchHHHhcCCCCCeeeec--ccccCCCCeEEEEECHHHHHHhccCCC--c
Confidence 8999999999 99999999999822 11 112222345776554 999876778999999998877654210 0
Q ss_pred ccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc----CCccccCCCccCCc
Q 015729 231 FFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW----GLKNCTQKEEWFSD 306 (401)
Q Consensus 231 ~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~ 306 (401)
+ ...+++.++..+++..++++.+.++ ...++.+++.+++++.|+++ ++..... ..+
T Consensus 296 ~-------------~~~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~----~~g 355 (429)
T 4e77_A 296 Y-------------QAGTLSGNPIAMAAGFACLTEISQV---GVYETLTELTDSLATGLRHAAKEENIPLVVN----HVG 355 (429)
T ss_dssp C-------------C--CCCCCHHHHHHHHHHHHHHTST---THHHHHHHHHHHHHHHHHHHHHHTTCCCEEE----EET
T ss_pred c-------------ccCCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCceEEE----Eee
Confidence 0 0113457777778888888876443 45666677777777777653 3322211 234
Q ss_pred eeEEEEcCCCC--------------CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 307 TVTAVIVPSHI--------------NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 307 ~~~~~~~~~~~--------------~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.++++.+++.. ...++.+.|.++ ||.+.++.. ..+|++ ...+++|+++++++|++++++
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~----~~~~~~--~~~t~e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 356 GMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEE-GVYLAPSAF----EAGFMS--LAHSNEDIQKTVNAARRCFAK 428 (429)
T ss_dssp TEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHT-TEECCSSTT----SCEECC--TTCCHHHHHHHHHHHHHHHTT
T ss_pred eEEEEEEccCcccccccccccccHHHHHHHHHHHHHC-CeEEeecCC----CCEEEe--ccCCHHHHHHHHHHHHHHHHh
Confidence 57778875431 126788888877 999987642 245654 457999999999999998864
No 219
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.92 E-value=1.8e-23 Score=201.21 Aligned_cols=312 Identities=17% Similarity=0.096 Sum_probs=211.3
Q ss_pred ChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcCCcc
Q 015729 20 IPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIGQF 95 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~~ 95 (401)
.++.+.+++.+.... +.. ...+...++++.++++++ . .+.+++++||++|++.++.. .+.++++|++.+++|+
T Consensus 73 ~~~~v~~a~~~~~~~~~~~~-~~~~~~~~l~~~la~~~~-~-~~~v~~~~sgseA~~~al~~ar~~~~~~~vi~~~~~yh 149 (434)
T 2epj_A 73 KHPRVLEAVEEALARGWLYG-APGEAEVLLAEKILGYVK-R-GGMIRFVNSGTEATMTAIRLARGYTGRDLILKFDGCYH 149 (434)
T ss_dssp TCHHHHHHHHHHHHTCSCCS-SCCHHHHHHHHHHHHHHC-T-TCEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCC
T ss_pred CCHHHHHHHHHHHHhCCCCC-CCCHHHHHHHHHHHHhCC-C-CCEEEEeCCHHHHHHHHHHHHHHhhCCCeEEEEcCCcC
Confidence 567777777764432 122 234667789999999985 2 34599999999999998865 2445678999988887
Q ss_pred hHHHHHH--H----------HHcCC------cEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc--
Q 015729 96 SLLWIDQ--Q----------QRLNF------NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN-- 155 (401)
Q Consensus 96 ~~~~~~~--~----------~~~g~------~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~-- 155 (401)
+.....+ . ...|+ ++..++.+ |++++++++++.. +++++|+++++++++|.+.+
T Consensus 150 g~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~-----d~~~le~~l~~~~-~~~~~vi~ep~~~~~G~~~~~~ 223 (434)
T 2epj_A 150 GSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPYN-----DVEALERVFAEYG-DRIAGVIVEPVIANAGVIPPRR 223 (434)
T ss_dssp CSSGGGSEECC------CEESSTTCCHHHHTTEEEEETT-----CHHHHHHHHHHHG-GGEEEEEECSSBCSSSCBCCCH
T ss_pred CCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCCC-----CHHHHHHHHHhCC-CCEEEEEEeCCcCCCCccCCCH
Confidence 6432110 0 01232 35555542 8999999997532 25688888877788999887
Q ss_pred --hHHHHHHhhhcCCCcEEEEecccccCcc--ee--ccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCc
Q 015729 156 --LSKVRKLLDEYRHPALFLVDGVSSICAI--DF--RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVR 229 (401)
Q Consensus 156 --l~~i~~l~~~~~~~~~li~D~a~~~~~~--~~--~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~ 229 (401)
+++|.++|++ +|+++|+|++|+.... .+ +.....+|++++ +|+++++.++|++++++++++.+.....
T Consensus 224 ~~l~~l~~l~~~--~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di~s~--sK~l~~G~~~G~v~~~~~~~~~l~~~~~-- 297 (434)
T 2epj_A 224 EFLAALQRLSRE--SGALLILDEVVTGFRLGLEGAQGYFNIEGDIIVL--GKIIGGGFPVGAVAGSREVMSLLTPQGK-- 297 (434)
T ss_dssp HHHHHHHHHHHH--HTCEEEEEETTTTTTSSTTHHHHHHTCCCSEEEE--EGGGGTTSSCEEEEECHHHHTTBTTTSS--
T ss_pred HHHHHHHHHHHH--cCCEEEEEcchhceeCCcchhhHHhCCCCCeeee--cchhcCCcceeeeeecHHHHHhhccCCC--
Confidence 9999999999 9999999999983211 11 111234677655 5999775568999999998776653110
Q ss_pred cccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc----CCccccCCCccCC
Q 015729 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW----GLKNCTQKEEWFS 305 (401)
Q Consensus 230 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~ 305 (401)
.+ .+ ..++.++..+++..++++.+.++ +..++..++.+++++.|+++ ++..... ..
T Consensus 298 ~~-----------~~--~t~~~~~~~~aa~~a~l~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~----~~ 357 (434)
T 2epj_A 298 VF-----------NA--GTFNAHPITMAAGLATLKALEEE---PVYSVSREAAKALEEAASEVLDRTGLPYTIN----RV 357 (434)
T ss_dssp BC-----------CC--CTTTTCHHHHHHHHHHHHHHHHS---CHHHHHHHHHHHHHHHHHHHHHHHTCCEEEE----EE
T ss_pred cc-----------cC--CCCCcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHhhCCCcEEEE----Ee
Confidence 00 01 13346677778888888877653 35677778888888888764 4432111 13
Q ss_pred ceeEEEEcCCC-------------CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 306 DTVTAVIVPSH-------------INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 306 ~~~~~~~~~~~-------------~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
+.++++.+++. .+..++.+.|.++ ||.+.++.. ..+|++ ..++++|+++++++|++++++
T Consensus 358 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~----~~~~~~--~~~t~e~i~~~l~~l~~~l~~ 430 (434)
T 2epj_A 358 ESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRR-GVFIAPSNL----EAVFTG--LPHQGEALEIAVEGLRSSLKT 430 (434)
T ss_dssp TTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHT-TEECCSSTT----SCEECC--TTCSHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHC-CeEEeccCC----CcEEEe--ccCCHHHHHHHHHHHHHHHHH
Confidence 45777887541 1245788888866 999987642 246664 457999999999999999876
Q ss_pred c
Q 015729 373 V 373 (401)
Q Consensus 373 ~ 373 (401)
+
T Consensus 431 ~ 431 (434)
T 2epj_A 431 V 431 (434)
T ss_dssp H
T ss_pred H
Confidence 4
No 220
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.91 E-value=1.7e-23 Score=199.91 Aligned_cols=284 Identities=15% Similarity=0.099 Sum_probs=193.6
Q ss_pred HHHHHHHccCcCC------CCCcc-HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEc-CC
Q 015729 22 DQVIRAMNRNNED------YRSPA-VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFL-IG 93 (401)
Q Consensus 22 ~~v~~a~~~~~~~------~~~~~-~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~-~~ 93 (401)
++|++++.+.... ..++. ......++++.+++++|.+....-++.+||++|+..++.+++++||+|+++. +.
T Consensus 38 ~~vl~A~~~~~~~~~~~~~~~g~~y~~~~~~~l~~~la~~~g~~~~~~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~ 117 (431)
T 3ht4_A 38 FRVLESFGKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILRPGDELLYITGKP 117 (431)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCCSCHHHHHHHHHHHHHTTCSEECCBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSC
T ss_pred HHHHHHHHHhchhhhhcCCCCCCCCChhhHHHHHHHHHHHhCCCcccccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCC
Confidence 5677777663211 11111 2245778999999999987532111245889999999999999999999998 66
Q ss_pred cchHHH-H-------HHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEe-cCCCccc---ccchHHHHH
Q 015729 94 QFSLLW-I-------DQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVH-NETATGV---TNNLSKVRK 161 (401)
Q Consensus 94 ~~~~~~-~-------~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~-~~n~tG~---~~~l~~i~~ 161 (401)
|.+... . ..++..|++++.++.++++.+|++++++++++ ++++|++++ ++||+|. ..++++|.+
T Consensus 118 y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~~~~~~d~e~l~~~l~~----~tk~V~i~~sp~np~~~~~~~~~l~~i~~ 193 (431)
T 3ht4_A 118 YDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIHS----NTKMIGIQRSKGYATRPSFTISQIKEMIA 193 (431)
T ss_dssp CTTHHHHTTSSSCSSSCSGGGTCEEEECCBCTTSSBCHHHHHHHCCT----TEEEEEEECSCTTSSSCCCCHHHHHHHHH
T ss_pred chhHHHHHhhcccccchHHHcCCEEEEeCCCCCCCcCHHHHHhhcCC----CCeEEEEECCCCCCCCCcCCHHHHHHHHH
Confidence 655431 1 22345799999999988888999999999973 679999996 5555554 557888999
Q ss_pred HhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccC---CCcceEEEecHHHHHHhccCCCCccccchHHHH
Q 015729 162 LLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSL---PTGMGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (401)
Q Consensus 162 l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g---~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (401)
+|+++++|+++|+|++|+.+....+....++|++++|.+|+++| ++| |++++++++++.+........
T Consensus 194 la~~~~~~~~livDea~~~~~~~~~~~~~g~Di~~~S~sK~lgg~~~~~G-G~v~~~~~li~~l~~~~~~~~-------- 264 (431)
T 3ht4_A 194 FVKEIKPDVVVFVDNCYGEFIEEQEPCHVGADLMAGSLIKNPGGGIVKTG-GYIVGKEQYVEACAYRLTSPG-------- 264 (431)
T ss_dssp HHHHHCTTCEEEEECTTCTTSSSCCGGGTTCSEEEEETTSGGGTTTCSSC-EEEEECHHHHHHHHHHHSCTT--------
T ss_pred HHHhhCCCCEEEEeCCChhhccCCCccccCCeEEEcCccccCCCCCCCce-EEEEecHHHHHHHHHHhccCC--------
Confidence 99886689999999999987654444556799999999999876 456 999999998877753211000
Q ss_pred HHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCC
Q 015729 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHIN 318 (401)
Q Consensus 239 ~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (401)
.|.....+... ...+...++. .....++..++++++.+.|+++|+++.+.....++..++.+.+++...
T Consensus 265 ----~g~~~~~~~~~--~~~~~~~l~~-----~~~~~~~~~~~a~~l~~~L~~~g~~v~p~~~~~~~~li~~i~l~~~~~ 333 (431)
T 3ht4_A 265 ----IGAEAGASLYS--LQEMYQGFFL-----APHVAGQALKGAIFTAAFLEKLGMNTSPAWNAPRTDLIQSVQFDDKDR 333 (431)
T ss_dssp ----TTTSCSCCCSC--SHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHTCCEESCTTSCCSSSCCEEECCCHHH
T ss_pred ----cccccCccHHH--HHHHHhHhhh-----HHHHHHHHHHHHHHHHHHHHhCcCEecCCCCCCCccEEEEEEeCCHHH
Confidence 01100111111 1122223322 245778888999999999999988774433333455577788854334
Q ss_pred HHHHHHHHHhh
Q 015729 319 SSEIVRRAWQR 329 (401)
Q Consensus 319 ~~~l~~~L~~~ 329 (401)
..++++.|.+.
T Consensus 334 ~~~~~~~l~~~ 344 (431)
T 3ht4_A 334 MIAFCQAIQYA 344 (431)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhc
Confidence 55777887754
No 221
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.91 E-value=6.1e-23 Score=198.64 Aligned_cols=311 Identities=15% Similarity=0.062 Sum_probs=198.2
Q ss_pred ChHHHHHHHccCcCCCC-CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc---cCCCCCeEEEEcCCcc
Q 015729 20 IPDQVIRAMNRNNEDYR-SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN---TLSPGDRIISFLIGQF 95 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~~~-~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~---~~~~gd~vl~~~~~~~ 95 (401)
.++.+++++.+...... .....+...++.+.+++.++ . .+++++++||++|++.++.. +.+ +++|++.+++|+
T Consensus 74 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~-~~~v~~~~gg~eA~~~al~~ar~~~~-~~~vi~~~~~yh 150 (453)
T 2cy8_A 74 GHPRVNAAIAEALSHGVQYAASHPLEVRWAERIVAAFP-S-IRKLRFTGSGTETTLLALRVARAFTG-RRMILRFEGHYH 150 (453)
T ss_dssp TCHHHHHHHHHHHTTTCSSCSSCHHHHHHHHHHHHHCT-T-CSEEEEESCHHHHHHHHHHHHHHHHC-CCEEEEECC---
T ss_pred CCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHhhCC-C-CCEEEEeCCHHHHHHHHHHHHHHhhC-CCEEEEEcCCcC
Confidence 56777777776443211 11234566778888887775 3 34699999999999998876 444 478999988887
Q ss_pred hHHHHHHH---------HHcCC------cEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc----h
Q 015729 96 SLLWIDQQ---------QRLNF------NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----L 156 (401)
Q Consensus 96 ~~~~~~~~---------~~~g~------~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l 156 (401)
+....... ...|+ .+..++. .|++++++++++.. +++++|+++++++++|.+.+ +
T Consensus 151 g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~-~~~~~vi~ep~~~~tG~~~~~~~~l 224 (453)
T 2cy8_A 151 GWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-----DDIEGMREVFANHG-SDIAAFIAEPVGSHFGVTPVSDSFL 224 (453)
T ss_dssp -------------------------CGGGEEEECT-----TCHHHHHHHHHHHG-GGEEEEEECSSEHHHHTEECCHHHH
T ss_pred CCchhhHhhcCCccCCCcCCCCCccccCceeecCC-----CCHHHHHHHHHhcC-CCEEEEEECCCCCCCCCcCCCHHHH
Confidence 65421111 01233 2333432 28999999997532 25678887777788999887 9
Q ss_pred HHHHHHhhhcCCCcEEEEecccccCcc--e--eccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCcccc
Q 015729 157 SKVRKLLDEYRHPALFLVDGVSSICAI--D--FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFF 232 (401)
Q Consensus 157 ~~i~~l~~~~~~~~~li~D~a~~~~~~--~--~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~ 232 (401)
++|.++|++ +|+++|+|++|+.... . .+.....+|+++ .+|+++++.++|++++++++++.+.......
T Consensus 225 ~~l~~l~~~--~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di~s--~sK~l~~G~~~G~v~~~~~~~~~l~~~~~~~--- 297 (453)
T 2cy8_A 225 REGAELARQ--YGALFILDEVISGFRVGNHGMQALLDVQPDLTC--LAKASAGGLPGGILGGREDVMGVLSRGSDRK--- 297 (453)
T ss_dssp HHHHHHHHH--TTCEEEEECTTTTTTTCTTHHHHHHTCCCSEEE--EEGGGGTTSSCEEEEECHHHHTTSSSCC------
T ss_pred HHHHHHHHH--cCCEEEEecCccccccCchhhhHHhCCCCcEEE--EChhhhCCcceEEEechHHHHHHhccccCCC---
Confidence 999999999 9999999999983211 0 111123467764 4599986667899999999877665410000
Q ss_pred chHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHH-HHHhcHHHHHHHHHHHHHHHHHHHHHc----CCccccCCCccCCce
Q 015729 233 DWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDL-IFEEGLENVIERHRRLGKATRLAVEAW----GLKNCTQKEEWFSDT 307 (401)
Q Consensus 233 ~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~-~~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~ 307 (401)
.+ .+ ..++.++..+++..++++. + .+ ...++..++.+++++.|+++ ++..... ..+.
T Consensus 298 -------~~-~~--~t~~~n~~~~aa~~aal~~~~-~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~----~~g~ 359 (453)
T 2cy8_A 298 -------VL-HQ--GTFTGNPITAAAAIAAIDTIL-ED---DVCAKINDLGQFAREAMNHLFARKGLNWLAY----GRFS 359 (453)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHH-HT---THHHHHHHHHHHHHHHHHHHHHHTTCCEEEE----CCTT
T ss_pred -------ce-eC--CCCCCCHHHHHHHHHHHHHHh-hh---hHHHHHHHHHHHHHHHHHHHHhhCCCcEEEE----Eeee
Confidence 00 01 1334667777788888887 6 43 35677778888888888764 3322111 2345
Q ss_pred eEEEEcCC-----C--------------CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 308 VTAVIVPS-----H--------------INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 308 ~~~~~~~~-----~--------------~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
++++.+++ . .+..++.+.|.++ ||.+.++ +.+|++ ..++++|+++++++|++
T Consensus 360 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-Gv~v~~~------~~~~l~--~~~t~~~i~~~l~~l~~ 430 (453)
T 2cy8_A 360 GFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILE-GVDIGGR------GSVFLS--AQHEREHVEHLVTTFDR 430 (453)
T ss_dssp EEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHT-TEECBTT------TEEECC--TTCCHHHHHHHHHHHHH
T ss_pred EEEEEEeccccccccccccccccccccHHHHHHHHHHHHHC-CeEEeCC------CCEEee--ccCCHHHHHHHHHHHHH
Confidence 77888853 1 1145788888876 9998532 236664 45799999999999999
Q ss_pred HHHhc
Q 015729 369 ILKDV 373 (401)
Q Consensus 369 ~l~~~ 373 (401)
+++++
T Consensus 431 ~l~~~ 435 (453)
T 2cy8_A 431 VLDRL 435 (453)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88754
No 222
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.91 E-value=8.6e-24 Score=202.65 Aligned_cols=283 Identities=8% Similarity=-0.021 Sum_probs=196.6
Q ss_pred HHHHHHHHHHHhcC-----CCCceEEecCChhHHHHHHHhcc--------CCCCCeEEEEcCCcchHHHHHHHHHcCCcE
Q 015729 44 TKTLLEDIKKIFKT-----TSGTPFLIPTTGTGAWESALTNT--------LSPGDRIISFLIGQFSLLWIDQQQRLNFNV 110 (401)
Q Consensus 44 ~~~l~~~la~~~g~-----~~~~~i~~~~g~t~a~~~~~~~~--------~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~ 110 (401)
..++++.++++++. -.++++++++|+++|+..++.++ +++||+|+++.|.|.++. ..++..|+++
T Consensus 102 ~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~--~~~~~~g~~~ 179 (427)
T 2hox_A 102 SFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFR--EQTKYFDKKG 179 (427)
T ss_dssp CHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHH--HHHHHSCBTT
T ss_pred hHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHH--HHHHHcCCee
Confidence 56888888888862 13356999999999999999998 899999999999876543 5567788887
Q ss_pred EEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcce-eccCc
Q 015729 111 DVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAID-FRMDE 189 (401)
Q Consensus 111 ~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~-~~~~~ 189 (401)
+.. .+|++++++++++ +++++++++|+||||.+++ + ++++ +..+.|+++...... ....
T Consensus 180 ~~~------~~d~~~l~~~~~~----~~k~v~l~~p~NPtG~~~~-~----~l~~----~~~i~d~~~~~~~~s~~~~~- 239 (427)
T 2hox_A 180 YVW------AGNAANYVNVSNP----EQYIEMVTSPNNPEGLLRH-A----VIKG----CKSIYDMVYYWPHYTPIKYK- 239 (427)
T ss_dssp EEE------EEEGGGGTTCSCG----GGEEEEEESSCTTTCCCCC-C----SSTT----CEEEEECTTCSTTTSCCCSC-
T ss_pred eee------cCCHHHHHHhhcC----CceEEEEcCCCCCcccccH-H----HHcC----CCEEEeecccCCCCCccccC-
Confidence 643 3578888877753 5699999999999999999 4 3333 467888775421111 1222
Q ss_pred ccceEEEecCCCcccCCCc--ceEEEe-cHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 015729 190 WGIDVALTGSQKALSLPTG--MGIVCA-SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLI 266 (401)
Q Consensus 190 ~~~di~~~s~~K~l~g~~g--~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~ 266 (401)
.+.+++++|.||.+ +.+| +|++++ ++++.+.+.... ... ..+.+.....++..+++..
T Consensus 240 ~~~~i~~~S~SK~~-g~~G~RiG~~~~~~~~l~~~l~~~~------------~~~------~~~~~~~~q~a~~~~L~~~ 300 (427)
T 2hox_A 240 ADEDILLFTMSKFT-GHSGSRFGWALIKDESVYNNLLNYM------------TKN------TEGTPRETQLRSLKVLKEV 300 (427)
T ss_dssp BCCSEEEEEHHHHT-SCGGGCCEEEEECCHHHHHHHHHHH------------HHH------TSSCCHHHHHHHHHHHHHH
T ss_pred CCceEEEEeChhcC-CCCCceEEEEEECCHHHHHHHHHHH------------Hhc------CCCCCHHHHHHHHHHhhcc
Confidence 46789999999988 4555 799999 588877665321 000 1124444334444455432
Q ss_pred HH----------hcHHHHHHHHHHHHHHHHHHHHHc-CCcc--cc-CCC-------ccCCceeEEEEcCCCCCHHHHHHH
Q 015729 267 FE----------EGLENVIERHRRLGKATRLAVEAW-GLKN--CT-QKE-------EWFSDTVTAVIVPSHINSSEIVRR 325 (401)
Q Consensus 267 ~~----------~g~~~~~~~~~~~~~~l~~~L~~~-g~~~--~~-~~~-------~~~~~~~~~~~~~~~~~~~~l~~~ 325 (401)
.+ ..+++.+++++++.+++.+.|++. |+.+ .. +.. ....+.++++.++. +..+++..
T Consensus 301 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~--~~~~~~~~ 378 (427)
T 2hox_A 301 VAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW--EEDKDCYQ 378 (427)
T ss_dssp HHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECS--GGGCSHHH
T ss_pred hhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECCC--cHHHHHHH
Confidence 11 124567788888999999999886 7654 11 110 01235678888854 45567777
Q ss_pred HHhhCCeEEccCCCCC-CCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 326 AWQRYNLSLGLGLNKV-AGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 326 L~~~~~i~v~~g~~~~-~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
|.++.||.+++|.... ..+++||++.. +++++++++++|+++++
T Consensus 379 ll~~~gI~v~pg~~f~~~~~~~Ris~~~--~~e~l~~~l~~l~~~~~ 423 (427)
T 2hox_A 379 TFQNGRINTQNGVGFEASSRYVRLSLIK--TQDDFDQLMYYLKDMVK 423 (427)
T ss_dssp HHHHTTEECEEGGGGTSCTTEEEEECSS--CHHHHHHHHHHHHHHHT
T ss_pred HHHHCCEEEcCCCccCCCCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 7655699999985432 36789998875 89999999999998874
No 223
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.91 E-value=4e-23 Score=197.77 Aligned_cols=304 Identities=11% Similarity=-0.022 Sum_probs=194.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEE-eCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVV-ESDW 117 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v-~~~~ 117 (401)
.+...++++.+++++|.+. .+++++|++|+..++.+++++||+|+++.++|++.. +...++..|++++.+ +.+
T Consensus 57 ~~~~~~l~~~la~~~g~~~---~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~- 132 (421)
T 2ctz_A 57 NPTVDVLEKRLAALEGGKA---ALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREE- 132 (421)
T ss_dssp CHHHHHHHHHHHHHHTCSE---EEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTC-
T ss_pred ChHHHHHHHHHHHHhCCCc---eEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCC-
Confidence 3567899999999999863 456666799999999888999999999999988875 323357789999888 654
Q ss_pred CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEeccc-ccCcceeccCcccceEEE
Q 015729 118 GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVS-SICAIDFRMDEWGIDVAL 196 (401)
Q Consensus 118 ~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~-~~~~~~~~~~~~~~di~~ 196 (401)
|++++++++++ ++++|++++++||+|.+.|+++|.++|++ +|+++|+|++| +.+.. .+....++|+++
T Consensus 133 ----d~~~l~~~i~~----~~~~v~~~~~~n~~G~~~~l~~i~~~a~~--~g~~livD~~~~~~g~~-~~~~~~~~Di~~ 201 (421)
T 2ctz_A 133 ----RPEEFLALTDE----KTRAWWVESIGNPALNIPDLEALAQAARE--KGVALIVDNTFGMGGYL-LRPLAWGAALVT 201 (421)
T ss_dssp ----CHHHHHHHCCT----TEEEEEEESSCTTTCCCCCHHHHHHHHHH--HTCEEEEECGGGGGGTS-CCGGGGTCSEEE
T ss_pred ----CHHHHHHhhcc----CCeEEEEECCCCCCCcccCHHHHHHHHHH--cCCEEEEECCccccccc-CCccccCCeEEE
Confidence 79999999874 67999999999999999999999999999 99999999999 76632 222345799999
Q ss_pred ecCCCcccCCC-cceEEEec-H--HH----HHHhccCCCCccccc---------hHHHHHHhhcCCCCCCCCcHHHHHHH
Q 015729 197 TGSQKALSLPT-GMGIVCAS-P--KA----LEASKTAKSVRVFFD---------WKDYIKFYNLGTFWPYTPSIQLLYGL 259 (401)
Q Consensus 197 ~s~~K~l~g~~-g~G~l~~~-~--~~----~~~~~~~~~~~~~~~---------~~~~~~~~~~g~~~~~~~~~~~~~a~ 259 (401)
+|.||+++++. ++|.+++. + ++ .+.+.+......... +.. ..+++.-..+....+...++..
T Consensus 202 ~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~-~~r~~~~~~~g~~~~~~~a~~~ 280 (421)
T 2ctz_A 202 HSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIV-KARVDGLRDQGQALGPFEAWVV 280 (421)
T ss_dssp EETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHH-HHHHTHHHHHCCCCCHHHHHHH
T ss_pred ECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHH-HHHHHHHHhcCCCCCHHHHHHH
Confidence 99999997644 35655553 1 11 222322110000000 000 0111100001113444433333
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCcccc-CC-Cc------------cCCceeEEEEcCCC-CCHHHHH
Q 015729 260 RAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCT-QK-EE------------WFSDTVTAVIVPSH-INSSEIV 323 (401)
Q Consensus 260 ~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~-~~------------~~~~~~~~~~~~~~-~~~~~l~ 323 (401)
...++. +....++..++++++.+.|.+. ++.... +. .. ...+.++.|.++.. .+...+.
T Consensus 281 ~~~l~~-----l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~~~~~~~~~~ 355 (421)
T 2ctz_A 281 LLGMET-----LSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGGYEAAKRFI 355 (421)
T ss_dssp HHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTHHHHHHHHH
T ss_pred HcCcch-----HHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCCCHHHHHHHH
Confidence 333332 3445666678999999999886 665431 11 00 13456888888431 1122233
Q ss_pred HHHHhhCCeEEccCCC------C-----------------CCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 324 RRAWQRYNLSLGLGLN------K-----------------VAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 324 ~~L~~~~~i~v~~g~~------~-----------------~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
..|. .+++.++.|.. + ...+.+|+|+. .+|+|.+++.+++++
T Consensus 356 ~~l~-~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g----~e~~~~li~~l~~al 420 (421)
T 2ctz_A 356 SRLK-LISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVG----LEHVEDLKAELKEAL 420 (421)
T ss_dssp HTCS-SSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECC----SSCHHHHHHHHHHHT
T ss_pred HhCC-cceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeC----CCCHHHHHHHHHHHh
Confidence 3221 12334443311 0 12468999864 468888888887765
No 224
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.90 E-value=1.5e-22 Score=192.03 Aligned_cols=213 Identities=13% Similarity=0.064 Sum_probs=156.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHH-HHHcCCcEEEEeCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQ-QQRLNFNVDVVESDW 117 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~-~~~~g~~~~~v~~~~ 117 (401)
.+...++++++++++|.+. .++++||++|+.. +.+++++||+|++..+.|++.. +... ....|++++.++.+
T Consensus 66 ~p~~~~l~~~la~l~g~~~---~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~- 140 (400)
T 3nmy_A 66 NPTRFAYERCVAALEGGTR---AFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLT- 140 (400)
T ss_dssp CHHHHHHHHHHHHHHTCSE---EEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECTT-
T ss_pred CHHHHHHHHHHHHHhCCCC---EEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECCC-
Confidence 4567899999999998763 6777888999998 5678999999999999887654 3333 56679999999865
Q ss_pred CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEe
Q 015729 118 GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALT 197 (401)
Q Consensus 118 ~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~ 197 (401)
|++++++++++ ++++|++++++||+|.+.|+++|.++|++ +|+++|+|++++.+... .....++|+++.
T Consensus 141 ----d~~~l~~~i~~----~~~~v~~e~~~np~G~~~~l~~i~~la~~--~g~~livDe~~~~~~~~-~~~~~g~div~~ 209 (400)
T 3nmy_A 141 ----DPAAFKAAIRA----DTKMVWIETPTNPMLKLVDIAAIAVIARK--HGLLTVVDNTFASPMLQ-RPLSLGADLVVH 209 (400)
T ss_dssp ----SHHHHHHHCCT----TEEEEEEESSCTTTCCCCCHHHHHHHHHH--TTCEEEEECTTTHHHHC-CGGGGTCSEEEE
T ss_pred ----CHHHHHHHhcc----CCCEEEEECCCCCCCeeecHHHHHHHHHH--cCCEEEEECCCcccccC-ChhhcCCcEEEe
Confidence 89999999874 57999999999999999999999999999 99999999998754322 223457999999
Q ss_pred cCCCcccCCC-cc-e-EEE-ecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHH
Q 015729 198 GSQKALSLPT-GM-G-IVC-ASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLEN 273 (401)
Q Consensus 198 s~~K~l~g~~-g~-G-~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~ 273 (401)
|.+|+++|+. .+ | +++ .++++.+++... ...+ | .+.++...+.+...++ .++.
T Consensus 210 S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~------------~~~~--g----~~~~~~~a~~~l~~l~-----~l~~ 266 (400)
T 3nmy_A 210 SATKYLNGHSDMVGGIAVVGDNAELAEQMAFL------------QNSI--G----GVQGPFDSFLALRGLK-----TLPL 266 (400)
T ss_dssp ETTTTTTCSSSCCCEEEEECSCHHHHHHHHHH------------HHHH--C----CBCCHHHHHHHHHHHT-----THHH
T ss_pred cCccccCCCCCcceeEEEEeCCHHHHHHHHHH------------HHhc--C----CCCCHHHHHHHHHhHh-----HHHH
Confidence 9999997652 23 5 344 456665555321 0111 1 2344433333222322 2456
Q ss_pred HHHHHHHHHHHHHHHHHHc
Q 015729 274 VIERHRRLGKATRLAVEAW 292 (401)
Q Consensus 274 ~~~~~~~~~~~l~~~L~~~ 292 (401)
..++..++++.+.+.|++.
T Consensus 267 r~~~~~~~a~~l~~~L~~~ 285 (400)
T 3nmy_A 267 RMRAHCENALALAQWLETH 285 (400)
T ss_dssp HHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 7778888999999999874
No 225
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.90 E-value=7.2e-22 Score=197.33 Aligned_cols=300 Identities=11% Similarity=0.056 Sum_probs=211.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCC-C
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG-E 119 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~ 119 (401)
...+.++++.+++++|.+. .+++++|++.|+..++.+++++||+|++..++|.|.. ..+...|++++.++.+.+ .
T Consensus 194 ~g~i~eaE~~lA~~fGa~~--a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~--~~l~lsGa~pv~v~~~~~~~ 269 (715)
T 3n75_A 194 SGPHKEAEQYIARVFNADR--SYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLT--HLMMMSDVTPIYFRPTRNAY 269 (715)
T ss_dssp BTHHHHHHHHHHHHHTCSE--EEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHH--HHHHHSCCEEEEECCCBCTT
T ss_pred cHHHHHHHHHHHHHhCCCC--ceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHH--HHHHHcCCEEEEEecccccc
Confidence 3457899999999999976 2556666679999999999999999999999999876 346778999999986533 1
Q ss_pred ----CC-----ChHHHHHHHhccCC-CCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcc--e---
Q 015729 120 ----GA-----KLDVLASKLAADTA-HTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAI--D--- 184 (401)
Q Consensus 120 ----~~-----d~~~le~~~~~~~~-~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~--~--- 184 (401)
.+ |++++++++++++. +++++++++++ |++|.+.|+++|.++|++ ++ +++|+||+.+.. +
T Consensus 270 gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~--~~--livDEAH~~~~~f~~~~~ 344 (715)
T 3n75_A 270 GILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDV--KS--IHFDSAWVPYTNFSPIYE 344 (715)
T ss_dssp CCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCC--SE--EEEECTTCTTGGGSGGGT
T ss_pred ccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCc--Cc--EEEccccccccccCCccc
Confidence 23 89999999986531 23458999988 999999999999999987 64 799999986531 1
Q ss_pred -eccCccc--ceEE---EecCCCcccCCCcceEEEecHHHH-HHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHH
Q 015729 185 -FRMDEWG--IDVA---LTGSQKALSLPTGMGIVCASPKAL-EASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLY 257 (401)
Q Consensus 185 -~~~~~~~--~di~---~~s~~K~l~g~~g~G~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 257 (401)
......+ +|++ +.|.||+++++.+.|++.++++.. .++ ......+ +..+++...++
T Consensus 345 ~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~~~~~------------~~~~~~~-----~STSpsy~~~A 407 (715)
T 3n75_A 345 GKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETF------------NEAYMMH-----TTTSPHYGIVA 407 (715)
T ss_dssp TSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCCHHHH------------HHHHHHT-----SCSSCCHHHHH
T ss_pred cccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchhhHHHH------------HHHHHhh-----cCCCchHHHHH
Confidence 1111122 5654 899999998777779998876421 011 0111111 23468899999
Q ss_pred HHHHHHHHHHH-hcHHHHHHHHHHHHHHHHHHHHHc-C------CccccCCC-------------c------------cC
Q 015729 258 GLRAALDLIFE-EGLENVIERHRRLGKATRLAVEAW-G------LKNCTQKE-------------E------------WF 304 (401)
Q Consensus 258 a~~~al~~~~~-~g~~~~~~~~~~~~~~l~~~L~~~-g------~~~~~~~~-------------~------------~~ 304 (401)
++.+|++.+.. .| +..+++..++.+++++.|+++ + ++++.++. . ..
T Consensus 408 sldaA~~~~~~~~g-~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~ 486 (715)
T 3n75_A 408 STETAAAMMKGNAG-KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYL 486 (715)
T ss_dssp HHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEE
T ss_pred HHHHHHHHHHhhcc-HHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccC
Confidence 99999998864 44 567899999999999999875 2 33333210 0 01
Q ss_pred CceeEEEEcCC----------CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 305 SDTVTAVIVPS----------HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 305 ~~~~~~~~~~~----------~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.+.-+.+..+. |+++..+.+.|.++ ||.+.... ...+-+-+....++++++++++++.+.-+.
T Consensus 487 Dp~Kl~i~~~~~~~~G~~~~~Gi~g~~~~~~L~~~-~I~~E~~d----~~~vl~l~s~g~~~~~~~~L~~aL~~~~~~ 559 (715)
T 3n75_A 487 DPIKVTLLTPGMEKDGTMSDFGIPASIVAKYLDEH-GIVVEKTG----PYNLLFLFSIGIDKTKALSLLRALTDFKRA 559 (715)
T ss_dssp CTTEEEEECSCBCTTSCBCSSCCCHHHHHHHHHHT-TCCCSEEE----TTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCCCCCccccCCCcHHHHHHHHHHC-CCEEEecC----CCcEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 23344555542 56778999999654 88865332 223333244456899999999999876543
No 226
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.90 E-value=8.3e-23 Score=196.00 Aligned_cols=308 Identities=14% Similarity=0.034 Sum_probs=205.2
Q ss_pred ChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcCCcc
Q 015729 20 IPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIGQF 95 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~~ 95 (401)
.++++++++.+.... +.+ ...+...++.+.++++++ . .+++++++||++|++.++.. .+.++++|++.+++|+
T Consensus 69 ~~p~v~~a~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~-~-~~~v~~~~~g~ea~~~al~~ar~~~~~~~vi~~~~~yh 145 (424)
T 2e7u_A 69 AHPKVLARVRETLERGLTFG-APSPLEVALAKKVKRAYP-F-VDLVRFVNSGTEATMSALRLARGYTGRPYIVKFRGNYH 145 (424)
T ss_dssp TCHHHHHHHHHHHHTCSCCS-SCCHHHHHHHHHHHHHCT-T-CCEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCC
T ss_pred CCHHHHHHHHHHHHhCCCCC-CCCHHHHHHHHHHHHhCC-C-CCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcC
Confidence 567777777764432 222 234567789999999986 3 34599999999999998864 2444588999999888
Q ss_pred hHHHHHHH------------HHcCC------cEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc--
Q 015729 96 SLLWIDQQ------------QRLNF------NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN-- 155 (401)
Q Consensus 96 ~~~~~~~~------------~~~g~------~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~-- 155 (401)
+....... ...|+ ++..++. .|++++++++++.. +++++|++++.++++|.+.+
T Consensus 146 g~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~-~~~~~vi~ep~~~~~G~~~~~~ 219 (424)
T 2e7u_A 146 GHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-----NDPEGLREVLKRRG-EEIAAIIFEPVVGNAGVLVPTE 219 (424)
T ss_dssp CCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-----TCHHHHHHHHHHHG-GGEEEEEECSSBCTTSCBCCCH
T ss_pred CCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-----CCHHHHHHHHHhCC-CCEEEEEEeCCCCCCCCcCCCH
Confidence 64321110 01122 3444543 28999999987421 24567777665666998887
Q ss_pred --hHHHHHHhhhcCCCcEEEEecccccCcc--ee--ccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCc
Q 015729 156 --LSKVRKLLDEYRHPALFLVDGVSSICAI--DF--RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVR 229 (401)
Q Consensus 156 --l~~i~~l~~~~~~~~~li~D~a~~~~~~--~~--~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~ 229 (401)
+++|.++ ++ +|+++|+|++|+.... .+ +.....+|++ |.+|+++++.++|++++++++.+.+.....
T Consensus 220 ~~l~~l~~l-~~--~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di~--s~sK~l~~G~~~G~~~~~~~~~~~~~~~~~-- 292 (424)
T 2e7u_A 220 DFLKALHEA-KA--YGVLLIADEVMTGFRLAFGGATELLGLKPDLV--TLGKILGGGLPAAAYAGRREIMEKVAPLGP-- 292 (424)
T ss_dssp HHHHHHHHG-GG--GTCEEEEECTTTTTTSSTTHHHHHHTCCCSEE--EECGGGGTTSSCEEEEECHHHHTTBTTTSS--
T ss_pred HHHHHHHHH-HH--cCCEEEEecCccccccchhHHHHHhCCCcchh--hhhhhhhCCcceEEEEEcHHHHhhhcccCC--
Confidence 8999999 99 9999999999983211 11 1112246766 556999866678999999998877654110
Q ss_pred cccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc----CCccccCCCccCC
Q 015729 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW----GLKNCTQKEEWFS 305 (401)
Q Consensus 230 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~ 305 (401)
.+ .+ .+++.++..+++..++++.+.+ .++..++..++.+++++.|+++ ++..... ..
T Consensus 293 ~~-----------~~--~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~----~~ 353 (424)
T 2e7u_A 293 VY-----------QA--GTLSGNPLAMAAGLATLELLEE--NPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVN----RV 353 (424)
T ss_dssp BC-----------CC--CTTCSCHHHHHHHHHHHHHHHH--CTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEE----EE
T ss_pred cc-----------cC--CCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEE----ee
Confidence 00 01 1334666777788888887765 1457788888888888888774 4422111 12
Q ss_pred ceeEEEEcCCC-------------CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 306 DTVTAVIVPSH-------------INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 306 ~~~~~~~~~~~-------------~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
+.++++.+++. .+..++.+.|.++ ||.+.++.. ..+|++ ..++++|+++++++|+++
T Consensus 354 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~----~~~~~~--~~~t~~~i~~~l~~l~~~ 423 (424)
T 2e7u_A 354 GSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDR-GIYWPPSNF----EAAFLS--VAHREEDVEKTLEALRKA 423 (424)
T ss_dssp TTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTT-TEECCSSSS----SCEECC--TTCCHHHHHHHHHHHHHH
T ss_pred ceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHC-CeEEeccCC----CceEee--ccCCHHHHHHHHHHHHHh
Confidence 35778888541 1245788888865 999987642 236664 457999999999999875
No 227
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.89 E-value=3.4e-21 Score=178.41 Aligned_cols=345 Identities=12% Similarity=0.066 Sum_probs=225.6
Q ss_pred cccccCCCcCChHHHHHHHccCcCCCCC--------cc----HHHHHHHHHHHHHHHhcCCCCceE--EecCChhHHHHH
Q 015729 10 NHLFVPGPVHIPDQVIRAMNRNNEDYRS--------PA----VPALTKTLLEDIKKIFKTTSGTPF--LIPTTGTGAWES 75 (401)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~~~~--------~~----~~~~~~~l~~~la~~~g~~~~~~i--~~~~g~t~a~~~ 75 (401)
...+++.=-.++++|++++.....+.+. +. .+.+..-+.++..++||.+..++- +-..||+.|+.+
T Consensus 56 ~ieLIASEN~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs~AN~a 135 (490)
T 3ou5_A 56 GLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLA 135 (490)
T ss_dssp SEECCTTCCCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHH
T ss_pred CceEecCCCcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHHHHHHH
Confidence 3456666677889999999885543221 11 223344567788899999876531 456789999999
Q ss_pred HHhccCCCCCeEEEEcCCcch---HHHHH---HHHHcCC--cEEEEeCCC-CCCCChHHHHHHHhccCCCCceEEEEEec
Q 015729 76 ALTNTLSPGDRIISFLIGQFS---LLWID---QQQRLNF--NVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHN 146 (401)
Q Consensus 76 ~~~~~~~~gd~vl~~~~~~~~---~~~~~---~~~~~g~--~~~~v~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~ 146 (401)
+..++++|||+|+..+..+-+ +.+.. .....|. +.+...+++ ++.+|.|++++...+ .+||+|++-..
T Consensus 136 vy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~---~kPklIi~G~S 212 (490)
T 3ou5_A 136 VYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARL---FRPRLIIAGTS 212 (490)
T ss_dssp HHHHHCC-CCCEECBC----------------------------CBCEETTTTEECHHHHHHHHHH---HCCSEEEECCS
T ss_pred HHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCCcccHHHHHHHHhh---cCCCeEEECCc
Confidence 999999999999988874333 32111 1111222 233333343 457999999999887 57899988765
Q ss_pred CCCcccccchHHHHHHhhhcCCCcEEEEecccccCc-----ceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHH
Q 015729 147 ETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICA-----IDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEA 221 (401)
Q Consensus 147 ~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~-----~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~ 221 (401)
.+| ...|.+++.++|++ .|.++++|.+|..|. .+-.+. .+|++++|.||+|.||.| |++.++++...
T Consensus 213 aY~--r~id~~~~reIAd~--vGA~Lm~DmAHiaGLVA~g~~psP~~--~ADvVTtTTHKTLrGPrG-G~Il~~~~~~~- 284 (490)
T 3ou5_A 213 AYA--RLIDYARMREVCDE--VKAHLLADMAHISGLVAAKVIPSPFK--HADIVTTTTHKTLRGARS-GLIFYRKGVKA- 284 (490)
T ss_dssp SCC--SCCCHHHHHHHHHH--HTCEEEEECGGGHHHHHTTSSCCGGG--TCSEEEEESSSTTCSCSC-EEEEEECSEEE-
T ss_pred cCc--cccCHHHHHHHHhh--cccEEEechhhhhhhhcccccCCccc--cceEEeccccccccCCCc-eEEEecccccc-
Confidence 444 57799999999999 999999999997553 333333 489999999999998887 99988874211
Q ss_pred hccCCCCccccchHHHHH-HhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCC
Q 015729 222 SKTAKSVRVFFDWKDYIK-FYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQK 300 (401)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 300 (401)
...........++....+ ..-.|. -++|....+++...++.......++...++..+|++.|.+.|.+.|+++....
T Consensus 285 ~~~k~~~~~~~~~~kkin~aVFPg~--qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~G~~vvsGg 362 (490)
T 3ou5_A 285 VDPKTGREIPYTFEDRINFAVFPSL--QGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGG 362 (490)
T ss_dssp ECC--CCEEECCCHHHHHHHHTTTT--CSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGS
T ss_pred ccccccchhHHHHHHHHHhhcCccc--cccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhCCCeeecCC
Confidence 000000011111221111 111121 33477777777777777655555788999999999999999999999998632
Q ss_pred CccCCceeEEEEc-CCCCCHHHHHHHHHhhCCeEEccCCC-----CCCCcEEEEeeccc----CCHHHHHHHHHHHHHHH
Q 015729 301 EEWFSDTVTAVIV-PSHINSSEIVRRAWQRYNLSLGLGLN-----KVAGKVFRIGHLGH----LNELQLLGCLAGVEMIL 370 (401)
Q Consensus 301 ~~~~~~~~~~~~~-~~~~~~~~l~~~L~~~~~i~v~~g~~-----~~~~~~~Ri~~~~~----~~~~di~~~~~~i~~~l 370 (401)
..+.++.+.+ +.+++..+..+.|. +.||.+....- +.....+||++..- ..++|++++.+.|.+++
T Consensus 363 ---TdnHlvLvDl~~~g~tG~~ae~~Le-~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l 438 (490)
T 3ou5_A 363 ---TDNHLVLVDLRPKGLDGARAERVLE-LVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGV 438 (490)
T ss_dssp ---CSSSEEEEECGGGTCCHHHHHHHHH-HTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred ---CCceEEEEeccccCCCHHHHHHHHH-HcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 3445666776 45677778777775 55998763321 22234599998652 35899999999998877
Q ss_pred H
Q 015729 371 K 371 (401)
Q Consensus 371 ~ 371 (401)
+
T Consensus 439 ~ 439 (490)
T 3ou5_A 439 N 439 (490)
T ss_dssp H
T ss_pred H
Confidence 4
No 228
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.89 E-value=3.8e-21 Score=182.61 Aligned_cols=329 Identities=11% Similarity=-0.033 Sum_probs=204.4
Q ss_pred cccccCCCcCChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHh-cCC--CC-ceEEecCChhHHHHHHH----hc
Q 015729 10 NHLFVPGPVHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIF-KTT--SG-TPFLIPTTGTGAWESAL----TN 79 (401)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~-g~~--~~-~~i~~~~g~t~a~~~~~----~~ 79 (401)
+|.+--|.+++.+.|.+|....... ...|.+.....++++.+++++ |.. .. ...+.+.|+|.|+..++ ..
T Consensus 53 ~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~~~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~ 132 (420)
T 4h51_A 53 AYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDEAVKIIYGNTVELENLVAVQTLSGTGAVSLGAKLLTRV 132 (420)
T ss_dssp CCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHC---CGGGEEEEEEEHHHHHHHHHHHHHTTT
T ss_pred cccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHHHHHHHhcCCCccccccceeeecCchHHHHHHHHHHHHh
Confidence 3444445667778888876553211 123444566778888888875 322 11 22344788888876554 34
Q ss_pred cCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEE-EeC--CCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc-
Q 015729 80 TLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDV-VES--DWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN- 155 (401)
Q Consensus 80 ~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~-v~~--~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~- 155 (401)
+..|||+|++++|.|.++. ...+..|.+.+. .+. +....+|.+.+.+.+...+ +++++++++.++||||..++
T Consensus 133 ~~~pgd~V~ip~P~w~~y~--~i~~~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~-~~~~vll~~~p~NPtG~~~~~ 209 (420)
T 4h51_A 133 FDAETTPIYLSDPTWPNHY--GVVKAAGWKNICTYAYYDPKTVSLNFEGMKKDILAAP-DGSVFILHQCAHNPTGVDPSQ 209 (420)
T ss_dssp SCTTTSCEEEEESCCTHHH--HHHHHTTCCCEEEEECEEGGGTEECHHHHHHHHHHSC-SSCEEEEESSSCTTTCCCCCH
T ss_pred cCCCCCEEEEecCCchhHH--HHHHHcCCeEEEeeccccccccCCCHHHHHHHHhccC-CCcEEEEeCCCCCCCCCCCCH
Confidence 5689999999999877664 567778887543 333 2234578888888887654 56778888899999999996
Q ss_pred --hHHHHHHhhhcCCCcEEEEecccccCcce---ec-------cCcccceEEEecCCCcccCCCc--ceEEEecHHHHHH
Q 015729 156 --LSKVRKLLDEYRHPALFLVDGVSSICAID---FR-------MDEWGIDVALTGSQKALSLPTG--MGIVCASPKALEA 221 (401)
Q Consensus 156 --l~~i~~l~~~~~~~~~li~D~a~~~~~~~---~~-------~~~~~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~~ 221 (401)
+++|.++|++ +++++++|++|...... .+ .+.....+++.|.+|.++ .+| +|++++..+..+.
T Consensus 210 ~~~~~i~~~~~~--~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~-~~G~RvG~~~~~~~~~~~ 286 (420)
T 4h51_A 210 EQWNEIASLMLA--KHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMG-LYSERAGTLSLLLKDKTK 286 (420)
T ss_dssp HHHHHHHHHHHH--HTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSC-CGGGCEEEEEEECSCHHH
T ss_pred HHHHHHHHHHHh--cCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEeccccccc-cccCceEEEEecccCHHH
Confidence 5678889999 99999999998643211 11 112234578889999884 544 6988876543332
Q ss_pred hccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHH--HH---HhcHHHHHHHHHHHHHHHHHHHHHcCCc-
Q 015729 222 SKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDL--IF---EEGLENVIERHRRLGKATRLAVEAWGLK- 295 (401)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~--~~---~~g~~~~~~~~~~~~~~l~~~L~~~g~~- 295 (401)
.... ........... ..+++......+...+.. +. +..++..++++.++++.+.+.|+++|..
T Consensus 287 ~~~~---------~~~l~~~~r~~--~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~ 355 (420)
T 4h51_A 287 RADV---------KSVMDSLIREE--YTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRLQTPG 355 (420)
T ss_dssp HHHH---------HHHHHHHHHTT--TSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred HHHH---------HHHHHHhhhcc--cCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 2110 01111111111 223555443333333321 11 1225677888889999999999987533
Q ss_pred ---cccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 296 ---NCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 296 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
...+ ..+.+.+. +++.++ ++.|. +++|++.++ + ||++.+ ++++.|++++++|.+++++
T Consensus 356 ~~~~i~~----q~GmF~~~----gls~e~-v~~L~-e~~Vy~~~~------g--Ris~Ag-l~~~ni~~~a~aI~~vvr~ 416 (420)
T 4h51_A 356 SWEHVIN----QIGMFSFL----GLSKAQ-CEYCQ-NHNIFITVS------G--RANMAG-LTHETALMLAQTINDAVRN 416 (420)
T ss_dssp CCTHHHH----CCSSEEEC----CCCHHH-HHHHH-HTTEECCTT------C--EEEGGG-CCHHHHHHHHHHHHHHHC-
T ss_pred CCCeecC----CCceEEec----CcCHHH-HHHHH-hCCEEEcCC------C--EEEecc-CCHHHHHHHHHHHHHHHHH
Confidence 2222 24444433 334444 46675 459987643 2 997665 8999999999999999987
Q ss_pred cC
Q 015729 373 VG 374 (401)
Q Consensus 373 ~~ 374 (401)
+.
T Consensus 417 i~ 418 (420)
T 4h51_A 417 VN 418 (420)
T ss_dssp --
T ss_pred hh
Confidence 53
No 229
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.89 E-value=1.3e-21 Score=189.94 Aligned_cols=329 Identities=15% Similarity=0.155 Sum_probs=207.4
Q ss_pred CCCCcccccCCC------cCChHHHHHHHccCcC----CCC---C-ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhH
Q 015729 6 APGKNHLFVPGP------VHIPDQVIRAMNRNNE----DYR---S-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTG 71 (401)
Q Consensus 6 ~~~~~~~~~~~p------~~~~~~v~~a~~~~~~----~~~---~-~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~ 71 (401)
.-|+.|++..+. ...+|++++++.+... .+. + ....++..++.+.++++++.. .+.++|++||++
T Consensus 60 ~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~l~~~~~~~-~~~v~f~~sGse 138 (472)
T 1ohv_A 60 VDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGILPPENFVEKLRESLLSVAPKG-MSQLITMACGSC 138 (472)
T ss_dssp TTSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTTSCBTTHHHHHHHTGGGGCCTT-CCEEEEESSHHH
T ss_pred CCCCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHhCCCC-cCEEEEeCCchh
Confidence 345556655321 2357888888877532 111 1 111233334444444454333 345999999999
Q ss_pred HHHHHHhccC-------------------------CCC---CeEEEEcCCcchHHHHHHHH-------HcCCcE---EEE
Q 015729 72 AWESALTNTL-------------------------SPG---DRIISFLIGQFSLLWIDQQQ-------RLNFNV---DVV 113 (401)
Q Consensus 72 a~~~~~~~~~-------------------------~~g---d~vl~~~~~~~~~~~~~~~~-------~~g~~~---~~v 113 (401)
|++.++.... ++| ++|++.+++||+.....+.. ..+... ..+
T Consensus 139 A~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~ 218 (472)
T 1ohv_A 139 SNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIA 218 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEE
T ss_pred HHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCccc
Confidence 9999986542 145 89999999888865322111 112211 122
Q ss_pred eCCC-CC-------------CCChHHHHHHHhccCC--CCceEEEEEecCCCcccccc----hHHHHHHhhhcCCCcEEE
Q 015729 114 ESDW-GE-------------GAKLDVLASKLAADTA--HTIKAICIVHNETATGVTNN----LSKVRKLLDEYRHPALFL 173 (401)
Q Consensus 114 ~~~~-~~-------------~~d~~~le~~~~~~~~--~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~li 173 (401)
+.+. .. ..|+++|++++++... .++++|++.+++|++|.+.+ +++|.++|++ +|+++|
T Consensus 219 ~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~--~g~lli 296 (472)
T 1ohv_A 219 PFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRK--HGCAFL 296 (472)
T ss_dssp CCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHH--TTCEEE
T ss_pred CCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHH--hCCEEE
Confidence 3221 00 1257899998875210 15789999888899998877 9999999999 999999
Q ss_pred Eecccc-cCcc--eeccCccc----ceEEEecCCCc-ccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCC
Q 015729 174 VDGVSS-ICAI--DFRMDEWG----IDVALTGSQKA-LSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGT 245 (401)
Q Consensus 174 ~D~a~~-~~~~--~~~~~~~~----~di~~~s~~K~-l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 245 (401)
+|++|+ +|.. .+..+..+ +|++++| |+ ++ | |+++ ++++ ..+... ..+
T Consensus 297 ~DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~s--K~~l~---G-G~~~-~~~~-~~~~~~----------------~~~- 351 (472)
T 1ohv_A 297 VDEVQTGGGSTGKFWAHEHWGLDDPADVMTFS--KKMMT---G-GFFH-KEEF-RPNAPY----------------RIF- 351 (472)
T ss_dssp EECTTTTTTTTSSSSGGGGGCCSSCCSEEEEC--GGGSS---E-EEEE-CGGG-SCSSSS----------------SSC-
T ss_pred EeCcccCCCCCCCchhccccCCCCCCCEEEEc--ccccc---C-CccC-chhh-cccccc----------------ccc-
Confidence 999998 3322 12333334 7887665 98 43 2 6665 5443 111110 001
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCcc-ccCCCccCCceeEEEEcCCCCCHHHH
Q 015729 246 FWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKN-CTQKEEWFSDTVTAVIVPSHINSSEI 322 (401)
Q Consensus 246 ~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l 322 (401)
..++.++..++++.++++.+.+++ ..++..++.+++++.|+++ +++. +.... ..+.++++.+++..+..++
T Consensus 352 -~T~~~~~~~~aaa~aal~~~~~~~---~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~--~~g~~~~~~~~~~~~~~~~ 425 (472)
T 1ohv_A 352 -NTWLGDPSKNLLLAEVINIIKRED---LLSNAAHAGKVLLTGLLDLQARYPQFISRVR--GRGTFCSFDTPDESIRNKL 425 (472)
T ss_dssp -CSSSSCHHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHHCTTTCEEEE--EETTEEEEECSSHHHHHHH
T ss_pred -CccCccHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHhhCCCcEEeec--CCceEEEEEeCChhHHHHH
Confidence 123456667778888888876643 5678888888999888875 3431 11111 1245667777432235678
Q ss_pred HHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 323 VRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 323 ~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
++.|.++ ||.+.++ ..+++||++...+|++|+++++++|+++++++
T Consensus 426 ~~~l~~~-Gv~~~~~----g~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 471 (472)
T 1ohv_A 426 ISIARNK-GVMLGGC----GDKSIRFRPTLVFRDHHAHLFLNIFSDILADF 471 (472)
T ss_dssp HHHHHHT-TEECEEE----TTTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHC-CeEEecC----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 8888876 9998764 24689998888899999999999999998754
No 230
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.88 E-value=2.9e-20 Score=178.09 Aligned_cols=324 Identities=13% Similarity=0.056 Sum_probs=214.8
Q ss_pred ChHHHHHHHccCcCC--CC--CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcCC
Q 015729 20 IPDQVIRAMNRNNED--YR--SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIG 93 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~--~~--~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~~ 93 (401)
-+|++.+++.++... |. .....+...++.++|.++...+..+.+.|+++|++|++.++.- .....++|+....+
T Consensus 81 ~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~ 160 (456)
T 4atq_A 81 SDPAVVAAVQEAAAHFTHTCFMVTPYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHA 160 (456)
T ss_dssp TCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTC
T ss_pred CCHHHHHHHHHHHhhccCcccCccCcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecc
Confidence 456676666653321 11 1112344557888888888765555689999999999998843 33455789999999
Q ss_pred cchHHHHHHHHHc------------CCcEEEEeCCCCC------CCChHHHHHHHhc----cCCCCceEEEEEecCCCcc
Q 015729 94 QFSLLWIDQQQRL------------NFNVDVVESDWGE------GAKLDVLASKLAA----DTAHTIKAICIVHNETATG 151 (401)
Q Consensus 94 ~~~~~~~~~~~~~------------g~~~~~v~~~~~~------~~d~~~le~~~~~----~~~~~~~~i~~~~~~n~tG 151 (401)
||+.....+.... .-.+..+|..... ..+.+.+++.++. ...+++.+|++...+...|
T Consensus 161 yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG 240 (456)
T 4atq_A 161 YHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGG 240 (456)
T ss_dssp CCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTT
T ss_pred cCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCC
Confidence 9987633222110 1134555543211 1123333333321 1114688999999888889
Q ss_pred cccc----hHHHHHHhhhcCCCcEEEEecccccCcc---eeccC--cccceEEEecCCCcccCCCcceEEEecHHHHHHh
Q 015729 152 VTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI---DFRMD--EWGIDVALTGSQKALSLPTGMGIVCASPKALEAS 222 (401)
Q Consensus 152 ~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~---~~~~~--~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~ 222 (401)
.+.+ ++++.++|++ +|+++|+||++..... .+..+ ...+|+++++ |.++|+.++|.+.+++++.+.+
T Consensus 241 ~~~p~~~fl~~lr~lc~~--~gillI~DEV~tG~GRtG~~~a~e~~gv~PDivt~g--K~lggg~P~~av~~~~~i~~~~ 316 (456)
T 4atq_A 241 FIVPAEGFLPALSEWAKE--KGIVFIADEVQSGFCRTGEWFAVDHEGVVPDIITMA--KGIAGGLPLSAITGRADLLDAV 316 (456)
T ss_dssp CBCCCTTHHHHHHHHHHH--HTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEEC--GGGGTTSSCEEEEEEHHHHTTS
T ss_pred ccccchhhhHHHHHHHhh--cCCceEecccccccCCccccccccccCCCCchhhhh--hcccCcCCceeeEecHHHHhcc
Confidence 8875 7899999999 9999999999875221 12222 2347999887 8888888899999999988776
Q ss_pred ccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CC-----c
Q 015729 223 KTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GL-----K 295 (401)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~-----~ 295 (401)
.+.. +..+++.++..+++..++++.+.+++ +.++..+..+++.+.|+++ .+ +
T Consensus 317 ~~~~------------------~~~Tf~gnpla~aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~~~~ 375 (456)
T 4atq_A 317 HPGG------------------LGGTYGGNPVACAAALAAIDTMEQHD---LNGRARHIEELALGKLRELAAELSAGGGS 375 (456)
T ss_dssp CTTS------------------SCCSSSSCHHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred cccC------------------CCCCCCCChHHHHhhHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHHhcccccCC
Confidence 5431 11244567788889999999988865 5566677777777777664 11 2
Q ss_pred cccCCCccCCceeEEEEcCCCC----C---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 296 NCTQKEEWFSDTVTAVIVPSHI----N---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~----~---~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
++. +....+.++.+++.+.. + ...+.+.|+++ |+.+.+... .++.+||.+...+|++|+|+++++|++
T Consensus 376 ~v~--~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~-Gvl~~~~g~--~~~~irl~PpL~it~~~id~~l~~l~~ 450 (456)
T 4atq_A 376 VVG--DIRGRGAMLAIELVQPGSKEPNAELTKAVAAACLKE-GVIILTCGT--YGNVIRLLPPLVISDELLIDGLEVLAA 450 (456)
T ss_dssp CEE--EEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHT-TEECEEECT--TSCEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred ceE--EeeecceEEEEEEecCCCCCcCHHHHHHHHHHHHHC-CCEEEecCC--CCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 221 11234567777763211 1 34677788877 988765422 267899998888999999999999999
Q ss_pred HHHhc
Q 015729 369 ILKDV 373 (401)
Q Consensus 369 ~l~~~ 373 (401)
+++..
T Consensus 451 al~a~ 455 (456)
T 4atq_A 451 AIKAH 455 (456)
T ss_dssp HHHHC
T ss_pred HHHhh
Confidence 99753
No 231
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.79 E-value=6e-24 Score=204.10 Aligned_cols=314 Identities=14% Similarity=0.059 Sum_probs=207.9
Q ss_pred ChHHHHHHHccCcCCCCC-ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc--CCCCCeEEEEcCCcch
Q 015729 20 IPDQVIRAMNRNNEDYRS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQFS 96 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~~~~-~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--~~~gd~vl~~~~~~~~ 96 (401)
.+|+|++++.+....... ..+.+...++.++|+++++ . .+.+++++||++|++.++... +..+++|++.+.+||+
T Consensus 117 ~~p~V~~Av~~q~~~~~~~~~~~~~~~~Lae~L~~~~p-~-~~~v~~~nSGseA~~~Aik~ar~~tgr~~ii~~~~~yHG 194 (465)
T 2yky_A 117 SHPVIRAAVERALAVGLNLSTQTENEALFAEAVCDRFP-S-IDLVRFTNSGTEANLMALATATAITGRKTVLAFDGGYHG 194 (465)
Confidence 356777777775443211 1234667789999999985 2 234899999999999998653 3456899999998888
Q ss_pred HHHHHHH--HHcCC--cEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc----hHHHHHHhhhcCC
Q 015729 97 LLWIDQQ--QRLNF--NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLDEYRH 168 (401)
Q Consensus 97 ~~~~~~~--~~~g~--~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~~~~ 168 (401)
.....+. ...|+ .+..++ .+ |++++++++++.. +++++|++..+++++|.+.+ +++|.++|++ +
T Consensus 195 ~~~~~~sg~~~~g~~~~~~~~~--~~---d~~~l~~~l~~~~-~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~--~ 266 (465)
T 2yky_A 195 GLLNFASGHAPTNAPYHVVLGV--YN---DVEGTADLLKRHG-HDCAAILVEPMLGAGGCVPAERAFLDLLRAEASR--C 266 (465)
Confidence 6642221 12233 223333 22 7899999887532 46789988877777998876 8999999999 9
Q ss_pred CcEEEEecccccCcc--eeccCcc--cceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcC
Q 015729 169 PALFLVDGVSSICAI--DFRMDEW--GIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLG 244 (401)
Q Consensus 169 ~~~li~D~a~~~~~~--~~~~~~~--~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 244 (401)
|+++|+|++++ +.. .+..+.. .+|++ +.+|+++++.++|++++++++++.+........ +..+
T Consensus 267 g~llI~DEv~~-~r~g~~~a~~~~gv~pDi~--t~sK~lg~G~piG~v~~~~~i~~~l~~~~~g~~----------~~~~ 333 (465)
T 2yky_A 267 GALLIFDEVMT-SRLSGGGAQEMLGISADLT--TLGKYIGGGMSFGAFGGRRDLMERFDPARDGAF----------AHAG 333 (465)
Confidence 99999999998 521 1112222 35655 566999876668999999998877654100000 0001
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEEEcCC-CC----
Q 015729 245 TFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPS-HI---- 317 (401)
Q Consensus 245 ~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~-~~---- 317 (401)
+++.++..+++..++++.+.++ ...++..++.+++++.|+++ ...+... ....+.++++.+++ .+
T Consensus 334 ---T~~~npla~aAa~aaL~~l~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--v~g~G~~~~i~~~~~~~~~~~ 405 (465)
T 2yky_A 334 ---TFNNNILTMSAGHAALTQIYTR---QAASDLSASGDRFRANLNRIAVENQAPLQ--FTGLGSLGTIHFSRAPIRSAG 405 (465)
Confidence 2335555667777888877654 46777888888888888775 2322111 11244567776643 11
Q ss_pred --------CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 318 --------NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 318 --------~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
...++.+.|+++ ||.+.++... . ++ ..+|++|+|+++++++++++++
T Consensus 406 ~~~~~d~~~~~~~~~~ll~~-GV~v~p~~~~---~---~s--~~~t~edid~~l~~l~~~l~~~ 460 (465)
T 2yky_A 406 DVRAADQQLKELFFFHMLRK-GIYLAPRGMY---A---LS--LEIADAGRDAFAEALADFIGEQ 460 (465)
Confidence 134678888876 9998876421 1 33 3579999999999999998765
No 232
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.87 E-value=6.2e-20 Score=170.79 Aligned_cols=291 Identities=13% Similarity=0.081 Sum_probs=201.9
Q ss_pred HhcCCCCceEEecCChhHHHHHHHhccCCC----CCeEEEEcCCcchHHHHHHHHHcCCcEEEEeC---CCCCCCChHHH
Q 015729 54 IFKTTSGTPFLIPTTGTGAWESALTNTLSP----GDRIISFLIGQFSLLWIDQQQRLNFNVDVVES---DWGEGAKLDVL 126 (401)
Q Consensus 54 ~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~----gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~~d~~~l 126 (401)
.+|.+.....++++|+|.++.+++.+.+++ +|+|+++.+.|.|.. ......|+++++++. +....+|++.+
T Consensus 128 ~~G~~~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~--kAliL~Gl~Pv~V~p~~d~~~~~id~e~l 205 (501)
T 3hl2_A 128 LAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCF--KSMITAGFEPVVIENVLEGDELRTDLKAV 205 (501)
T ss_dssp HTTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHH--HHHHHTTCEEEEECEEEETTEEEECHHHH
T ss_pred HcCCCCCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHH--HHHHHcCCeEEEEeeeecccccCCCHHHH
Confidence 348887666888999998888777665553 499999999999875 556778999999986 33457899999
Q ss_pred HHHHhccCCCCceEEEEEecC-CCcccccchHHHHHHhhhcCCCcEEEEecccccCccee-----ccCccc-ceEEEecC
Q 015729 127 ASKLAADTAHTIKAICIVHNE-TATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDF-----RMDEWG-IDVALTGS 199 (401)
Q Consensus 127 e~~~~~~~~~~~~~i~~~~~~-n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~-----~~~~~~-~di~~~s~ 199 (401)
|+++++... +..+++++.++ +..+.+.|+++|.++|++ +|+++++|+||+...... .....| +|+++.|.
T Consensus 206 e~aI~e~ga-~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~--~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~ 282 (501)
T 3hl2_A 206 EAKVQELGP-DCILCIHSTTSCFAPRVPDRLEELAVICAN--YDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSL 282 (501)
T ss_dssp HHHHHHHCG-GGEEEEEEECSCCTTBCCCCHHHHHHHHHH--HTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEEEEH
T ss_pred HHHHHhcCC-CcEEEEEecCCCCCCcccccHHHHHHHHHH--cCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEEecc
Confidence 999987531 22333434333 324466899999999999 999999999998654211 122345 99999999
Q ss_pred CCcccCCCcceEEEec-HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHH
Q 015729 200 QKALSLPTGMGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERH 278 (401)
Q Consensus 200 ~K~l~g~~g~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~ 278 (401)
||++..+.|.|+++++ +++++++.... .|+ .+....+.+..++..+-..|+++..++.
T Consensus 283 HK~llvpIGG~ii~~~d~e~l~~~~~~y----------------PGr-----~S~Spsldl~~tLL~lGr~Gy~~ll~e~ 341 (501)
T 3hl2_A 283 DKNFMVPVGGAIIAGFNDSFIQEISKMY----------------PGR-----ASASPSLDVLITLLSLGSNGYKKLLKER 341 (501)
T ss_dssp HHHHCCCSSCEEEEESCHHHHHHHHHTS----------------CSC-----BCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccceeecCceEEEeCCHHHHHHHHHhC----------------CCC-----CCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999878776666554 45556553321 122 2333445678888888888999999999
Q ss_pred HHHHHHHHHHHHHc----CCccccCCCccCCceeEEEEcCC-----CCCHHHHHHHHHhhCCeE----EccCC-------
Q 015729 279 RRLGKATRLAVEAW----GLKNCTQKEEWFSDTVTAVIVPS-----HINSSEIVRRAWQRYNLS----LGLGL------- 338 (401)
Q Consensus 279 ~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~L~~~~~i~----v~~g~------- 338 (401)
.++++++++.|+++ |-+++... .-+.-+++.+.. +.+..++...|..+ +|. |.++.
T Consensus 342 ~ela~~L~~~L~~la~~~ge~ll~~~---~n~is~a~tl~~~~~~~~~~~t~~gs~Lf~r-~vsG~Rvv~~~~~~~i~g~ 417 (501)
T 3hl2_A 342 KEMFSYLSNQIKKLSEAYNERLLHTP---HNPISLAMTLKTLDEHRDKAVTQLGSMLFTR-QVSGARVVPLGSMQTVSGY 417 (501)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCBCCCT---TCSSEEEEECTTSCTTTSCHHHHHHHHHHHT-TCCSCEEECTTCCEEETTE
T ss_pred HHHHHHHHHHHHHHHHhcChhhcCCC---CCceeEEEecccccccccccHHHHHHHHHhc-CCCcceeecCCCceEECCe
Confidence 99999999999985 44554332 123345566521 11234566667655 432 22222
Q ss_pred -----C----CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 339 -----N----KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 339 -----~----~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
. .+.-.|+-+.+..-.+++|+|.++++++++++++.
T Consensus 418 ~f~~~g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~ 462 (501)
T 3hl2_A 418 TFRGFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVR 462 (501)
T ss_dssp EESSTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred eecCcccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 1 12235688877777899999999999999997663
No 233
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.86 E-value=1.3e-20 Score=179.60 Aligned_cols=315 Identities=12% Similarity=0.079 Sum_probs=204.4
Q ss_pred ChHHHHHHHccCcCC---CCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc--CCCCCeEEEEcCCc
Q 015729 20 IPDQVIRAMNRNNED---YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQ 94 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--~~~gd~vl~~~~~~ 94 (401)
-+|+|++|+.++... ...+ .....++.+.|++.+.. .+.+.|+++||+|++.++... ....++|+....+|
T Consensus 104 ~hp~v~~Av~~q~~~~~~~~~~--~~~~~~lae~l~~~~p~--~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~y 179 (454)
T 4ao9_A 104 SAPEIRDAVIEAMQGGINLTGH--NLLEGRLARLICERFPQ--IEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGY 179 (454)
T ss_dssp CCHHHHHHHHHHHHTCSCCCSE--ESSHHHHHHHHHHHSTT--CSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCB
T ss_pred CCHHHHHHHHHHHhcCCCccCC--cHHHHHHHHHHHHhCCC--CCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCc
Confidence 356666666553322 1112 22344778888888753 245999999999999988542 33457899998888
Q ss_pred chHHHHHHH--HHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc----hHHHHHHhhhcCC
Q 015729 95 FSLLWIDQQ--QRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLDEYRH 168 (401)
Q Consensus 95 ~~~~~~~~~--~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~~~~ 168 (401)
|+....... ............+.+ |.+.+++.+++.. +++.+|++....+..|.+.| +++|.++|++ +
T Consensus 180 HG~t~~~~~~~~~~~~~~~~~~~p~n---d~~~l~~~l~~~~-~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~--~ 253 (454)
T 4ao9_A 180 HGGVLGFGARPSPTTVPFDFLVLPYN---DAQTARAQIERHG-PEIAVVLVEPMQGASGCIPGQPDFLQALRESATQ--V 253 (454)
T ss_dssp CSTTCBBSSSBCTTSCCSEEEEECTT---CHHHHHHHHHHTG-GGEEEEEECSEESTTTCEECCHHHHHHHHHHHHH--H
T ss_pred CCccccccccccCccCCCCcccCCCc---hHHHHHHHHhhcC-CceEEEEeccccCCCCccCCchhhHHHHHHHHhh--c
Confidence 876421100 001111122222222 7999999998755 46889999988888999887 8899999999 9
Q ss_pred CcEEEEecccccCcce--e--ccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcC
Q 015729 169 PALFLVDGVSSICAID--F--RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLG 244 (401)
Q Consensus 169 ~~~li~D~a~~~~~~~--~--~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 244 (401)
|+++|+||++. |-.- + ......+|+++++ |.++++.++|.+.+++++++.+.+.... .++ +
T Consensus 254 g~lLI~DEV~t-GR~G~~~a~e~~gv~PDi~t~g--K~lggG~Piga~~~~~ei~~~~~~~~~~-~~h-----------~ 318 (454)
T 4ao9_A 254 GALLVFDEVMT-SRLAPHGLANKLGIRSDLTTLG--KYIGGGMSFGAFGGRADVMALFDPRTGP-LAH-----------S 318 (454)
T ss_dssp TCEEEEECTTG-GGGSTTCHHHHHTCCCSEEEEE--GGGGTTSSCEEEEECHHHHGGGCTTTCS-CCC-----------C
T ss_pred CCEEEEECCCc-CCCccccchhccCCCCcEEEec--cccCCCCcceeeeeHHHHHHHHhhccCC-ccc-----------c
Confidence 99999999987 3111 1 1112347888877 9898888899999999998877643211 111 1
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEEEcCCC-C----
Q 015729 245 TFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSH-I---- 317 (401)
Q Consensus 245 ~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~-~---- 317 (401)
. +++.++..+++..++|+.+.++ +..++..++.++|++.|+++ ...+... -...+.++.+.+-++ .
T Consensus 319 ~--T~~gnPla~AAala~L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~--vrg~G~m~gi~f~~~~~~~~~ 391 (454)
T 4ao9_A 319 G--TFNNNVMTMAAGYAGLTKLFTP---EAAGALAERGEALRARLNALCANEGVAMQ--FTGIGSLMNAHFVQGDVRSSE 391 (454)
T ss_dssp C--TTTTCHHHHHHHHHHHHHTSCH---HHHHHHHHHHHHHHHHHHHHHHHHTBSCE--EEEETTEEEEESCCSCCCSGG
T ss_pred C--CCCCCHHHHHHHHHHHHHHhcc---ChhHHHHHHHHHHHHHHHHHHhhCCCCEE--EeeeceEEEEEEecCCCCCHH
Confidence 1 3345677777888888877653 46777778888888888764 1222111 112345666665221 1
Q ss_pred -----CH---HHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 318 -----NS---SEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 318 -----~~---~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
+. ..+...|+++ ||.+.|. +.+.+ ...+|++|||++++++++++.+.+.
T Consensus 392 ~~~~~d~~~~~~~~~~ll~~-Gv~~~p~------~~~~~--s~~~T~~dId~~l~al~~~l~~~~a 448 (454)
T 4ao9_A 392 DLAAVDGRLRQLLFFHLLNE-DIYSSPR------GFVVL--SLPLTDADIDRYVAAIGSFIGGHGA 448 (454)
T ss_dssp GGTTCCHHHHHHHHHHHHHT-TEECCTT------CEEEC--CTTCCHHHHHHHHHHHHHHHHHSGG
T ss_pred HHHhhhHHHHHHHHHHHHHC-CEEEcCC------CCEEE--eCCCCHHHHHHHHHHHHHHHHhccc
Confidence 11 2455667777 9987642 23333 3457999999999999999988653
No 234
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.86 E-value=2.2e-19 Score=169.50 Aligned_cols=304 Identities=12% Similarity=0.077 Sum_probs=196.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCC----CCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeC
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLS----PGDRIISFLIGQFSLLWIDQQQRLNFNVDVVES 115 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~----~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 115 (401)
.....+.+...+.+.+|.+.....++++|+|.++.+++.+..+ +++.|+++...|.|.. +.+...|++++.++.
T Consensus 96 ~~~~e~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~--kAl~l~Gl~p~~v~~ 173 (450)
T 3bc8_A 96 LNKITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCF--KSMVTAGFEPVVIEN 173 (450)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHH--HHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHH--HHHHHcCCeeEEEEe
Confidence 3456668888888999998776668888888555554433333 3789999999888765 667889999888876
Q ss_pred ---CCCCCCChHHHHHHHhccCCCCceEEEEEecC-CCcccccchHHHHHHhhhcCCCcEEEEecccccCcceec-c--C
Q 015729 116 ---DWGEGAKLDVLASKLAADTAHTIKAICIVHNE-TATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFR-M--D 188 (401)
Q Consensus 116 ---~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~-n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~-~--~ 188 (401)
+...++|++.+++++++++.+. +++++..++ +.+|.+.|+++|.++|++ +|+++|+|+||+....... + .
T Consensus 174 ~~~~~~~~id~~~le~aI~~~~~~~-~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~--~gi~l~VD~A~G~~~~~~~~l~~~ 250 (450)
T 3bc8_A 174 VLEGDELRTDLKAVEAKIQELGPEH-ILCLHSTTACFAPRVPDRLEELAVICAN--YDIPHVVNNAYGLQSSKCMHLIQQ 250 (450)
T ss_dssp EEETTEEECCHHHHHHHHHHHCGGG-EEEEEEESSCCTTBCCCCHHHHHHHHHH--HTCCEEEECTTTTTCHHHHHHHHH
T ss_pred eecCccCCcCHHHHHHHHHhcCCCC-EEEEEEECCcCCCceecCHHHHHHHHHH--CCCeEEEECCCchhhhhhHhHHHH
Confidence 4456899999999998754122 344444443 445688999999999999 9999999999986432211 0 1
Q ss_pred --c-ccceEEEecCCCcccCCCcceEEEec-HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHH
Q 015729 189 --E-WGIDVALTGSQKALSLPTGMGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALD 264 (401)
Q Consensus 189 --~-~~~di~~~s~~K~l~g~~g~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~ 264 (401)
+ .++|+++.|.||++..+.|++++.++ ++.++.+... +. +. .+.++. ..++..+.
T Consensus 251 a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~~~~---------------~~-g~---~s~Sps--L~l~~~l~ 309 (450)
T 3bc8_A 251 GARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISKM---------------YP-GR---ASASPS--LDVLITLL 309 (450)
T ss_dssp HHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHHHH---------------SC-SC---BCSHHH--HHHHHHHH
T ss_pred HhcccCCCEEEECCccCCCchhccEEEEecCHHHHHHHHHH---------------hh-cC---CcccHH--HHHHHHHH
Confidence 1 27999999999999999998999874 4444433221 10 11 011221 34444544
Q ss_pred HHHHhcHHHHHHHHHHHHHHHHHHHHHc----CCccccCCCccCCceeEEEEcC-----CCCCHHHHHHHHHhh--CCeE
Q 015729 265 LIFEEGLENVIERHRRLGKATRLAVEAW----GLKNCTQKEEWFSDTVTAVIVP-----SHINSSEIVRRAWQR--YNLS 333 (401)
Q Consensus 265 ~~~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~L~~~--~~i~ 333 (401)
.+..+++.+..++..++++++++.|+++ |..++..... . .-..+.++ ...|...+.-.+... .|..
T Consensus 310 ~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~--~-~~~~~~l~~~~~~~~~D~tkl~i~~~~~g~sG~~ 386 (450)
T 3bc8_A 310 SLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHN--P-ISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGAR 386 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTC--S-SEEEEECTTTSSSSSCHHHHHHHHHHHTTCCSCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCCccC--C-CcceeecccccccccCCCceeEEEecCCCCccce
Confidence 4455567888888899999999999764 6666543211 1 11223231 122334444444433 1222
Q ss_pred Ec-------------cCCC----CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 334 LG-------------LGLN----KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 334 v~-------------~g~~----~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
+. ..+. -....++-+.+....+++|+++++++|++++++
T Consensus 387 v~~~~~~~~~~~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~ 442 (450)
T 3bc8_A 387 AVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNI 442 (450)
T ss_dssp EECSCCEEEETTEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred eeecccccchhHHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 22 1111 112345666555568999999999999998754
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.84 E-value=8.1e-19 Score=168.70 Aligned_cols=327 Identities=16% Similarity=0.085 Sum_probs=214.0
Q ss_pred ChHHHHHHHccCcCC----CCCc-cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC-------CC-CCe
Q 015729 20 IPDQVIRAMNRNNED----YRSP-AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL-------SP-GDR 86 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~----~~~~-~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~-------~~-gd~ 86 (401)
-+|++.+++.++... +... ...+...++.++|.++...+- +.+.|++||++|++.++.... ++ ..+
T Consensus 84 ~~p~v~~Ai~~q~~~l~~~~~~~~~~~~~~~~lAe~L~~~~p~~~-~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ 162 (473)
T 4e3q_A 84 DHKGLIDAAKAQYERFPGYHAFFGRMSDQTVMLSEKLVEVSPFDS-GRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRK 162 (473)
T ss_dssp CCHHHHHHHHHHHHHCCCCCCCTTEEEHHHHHHHHHHHHHSSCSS-CEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCE
T ss_pred CCHHHHHHHHHHHHhcccccccccccCHHHHHHHHHHHhhCCCCc-cEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcce
Confidence 346666666553321 1111 123445578888888876543 349999999999999884311 22 357
Q ss_pred EEEEcCCcchHHHHHHHHH-------cC---CcEEEEeCCC------CCCC-------ChHHHHHHHhccCCCCceEEEE
Q 015729 87 IISFLIGQFSLLWIDQQQR-------LN---FNVDVVESDW------GEGA-------KLDVLASKLAADTAHTIKAICI 143 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~-------~g---~~~~~v~~~~------~~~~-------d~~~le~~~~~~~~~~~~~i~~ 143 (401)
|+....+||+.....+... .+ .....++.+. .+.. ..+++++.+.+...+++.+|++
T Consensus 163 ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~ 242 (473)
T 4e3q_A 163 ILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREGADTIAGFFA 242 (473)
T ss_dssp EEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEE
T ss_pred EEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhCCCceEEEEe
Confidence 8888889988664332211 11 1234444322 1111 1245666665443356889999
Q ss_pred EecCCCcccccc----hHHHHHHhhhcCCCcEEEEecccccCcc---ee--ccCcccceEEEecCCCcccCC-CcceEEE
Q 015729 144 VHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI---DF--RMDEWGIDVALTGSQKALSLP-TGMGIVC 213 (401)
Q Consensus 144 ~~~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~---~~--~~~~~~~di~~~s~~K~l~g~-~g~G~l~ 213 (401)
..+....|.+.+ +++|.++|++ +|+++|.||++..+.. .+ +.....+|+++++ |.++++ .++|.+.
T Consensus 243 EPiqg~gG~~~p~~~fl~~lr~lc~~--~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~t~~--K~l~gG~~Pl~av~ 318 (473)
T 4e3q_A 243 EPVMGAGGVIPPAKGYFQAILPILRK--YDIPVISDEVICGFGRTGNTWGCVTYDFTPDAIISS--KNLTAGFFPMGAVI 318 (473)
T ss_dssp CSSBSTTTSBCCCTTHHHHHHHHHHH--TTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEEEEC--GGGGTTSSCCEEEE
T ss_pred CCccCCCCceeCCHHHHHHHHHHhcc--cceEEeccCccccCCcccchhHHHhcCCCCChHHhc--ccccCCCCCccccc
Confidence 998888898875 7899999999 9999999999875321 12 2223348998887 988776 6899999
Q ss_pred ecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-
Q 015729 214 ASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW- 292 (401)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~- 292 (401)
+++++.+.+..... ....+.-|. +++-++..+++..++++.+.+++ ..++..+..++|++.|+++
T Consensus 319 ~~~~i~~~~~~~~~---------~~~~~~hg~--T~~Gnpla~Aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~ 384 (473)
T 4e3q_A 319 LGPELSKRLETAIE---------AIEEFPHGF--TASGHPVGCAIALKAIDVVMNEG---LAENVRRLAPRFEERLKHIA 384 (473)
T ss_dssp ECHHHHHHHHHHHH---------HHSCCCCCC--TTTTCHHHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHhccccc---------cccccccCC--CCCCCcchhhhhhhhhhhhcccc---HHHHHHHHHHHHHHHHHHHh
Confidence 99999876643100 000011122 44566778888899999988865 6667778888999999886
Q ss_pred CCccccCCCccCCceeEEEEcCCC------CC-----HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHH
Q 015729 293 GLKNCTQKEEWFSDTVTAVIVPSH------IN-----SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLG 361 (401)
Q Consensus 293 g~~~~~~~~~~~~~~~~~~~~~~~------~~-----~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~ 361 (401)
....+. +....+.++.+++-.. .+ ...+.+.++++ |+.+++. ++.+|+.+...+|++|+|+
T Consensus 385 ~~~~v~--~vRG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~-----g~~i~l~PPL~it~~eid~ 456 (473)
T 4e3q_A 385 ERPNIG--EYRGIGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDL-GLICRPL-----GQSVVLCPPFILTEAQMDE 456 (473)
T ss_dssp TSTTEE--EEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHT-TEECEEE-----TTEEEECCCTTCCHHHHHH
T ss_pred cCCCee--EEeecceEEEEEEecCccccccccccHHHHHHHHHHHHHC-CcEEEec-----CCEEEEeCCCCCCHHHHHH
Confidence 322221 1223455677775211 11 34678888876 9987643 5689998887899999999
Q ss_pred HHHHHHHHHHhc
Q 015729 362 CLAGVEMILKDV 373 (401)
Q Consensus 362 ~~~~i~~~l~~~ 373 (401)
++++++++++++
T Consensus 457 ~~~~l~~al~~v 468 (473)
T 4e3q_A 457 MFDKLEKALDKV 468 (473)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.73 E-value=2e-17 Score=169.29 Aligned_cols=327 Identities=10% Similarity=0.003 Sum_probs=200.2
Q ss_pred hHHHHHHHccCcCC--CCC--ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC-----CC--------
Q 015729 21 PDQVIRAMNRNNED--YRS--PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL-----SP-------- 83 (401)
Q Consensus 21 ~~~v~~a~~~~~~~--~~~--~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~-----~~-------- 83 (401)
+|++.+|+.++... |.. ....+...+|.++|+++.+...-+.++|++||++|++.++...+ ..
T Consensus 399 ~p~i~~Ai~~Q~~~l~h~~~~~~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~AlK~A~r~~~~~~g~~~~~~~ 478 (831)
T 4a0g_A 399 QAELAREMGYTAARFGHVMFPENVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIALKMAFRKFCVDHNFCEATEE 478 (831)
T ss_dssp HHHHHHHHHHHHHHHSSCCCTTEECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTTC------
T ss_pred CHHHHHHHHHHHhhcccccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHHHHHHHHHHHHhhcCCCccccc
Confidence 56666666664321 211 11234455888999998864423459999999999998874321 11
Q ss_pred ----CCeEEEEcCCcchHHHHHHHHHcCCc----------------------------EEEEeCCCCCC--------C-C
Q 015729 84 ----GDRIISFLIGQFSLLWIDQQQRLNFN----------------------------VDVVESDWGEG--------A-K 122 (401)
Q Consensus 84 ----gd~vl~~~~~~~~~~~~~~~~~~g~~----------------------------~~~v~~~~~~~--------~-d 122 (401)
..+|+....+||+..+..+.- .|.. +..++.+.... . +
T Consensus 479 ~~~~r~~iI~~~~syHG~T~gals~-tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 557 (831)
T 4a0g_A 479 EKHIVVKVIALRGSYHGDTLGAMEA-QAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTS 557 (831)
T ss_dssp ---CCEEEEEETTCCCCSSHHHHHT-SCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESC
T ss_pred cccCccEEEEecCCcccCceeeeec-cCccccccccccccccCCccccCCccccccCCceEecCCccccccccccccccc
Confidence 237888899998876543322 2210 01222221100 0 1
Q ss_pred ------------------hHHHHHHHhc----cCCCCceEEEEEec-CCCcccccc----hHHHHHHhhhcCCCcEEEEe
Q 015729 123 ------------------LDVLASKLAA----DTAHTIKAICIVHN-ETATGVTNN----LSKVRKLLDEYRHPALFLVD 175 (401)
Q Consensus 123 ------------------~~~le~~~~~----~~~~~~~~i~~~~~-~n~tG~~~~----l~~i~~l~~~~~~~~~li~D 175 (401)
.+.+++.+++ ...+++++|++... ++..|...+ +++|.++|++ ||+++|+|
T Consensus 558 ~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~--~gilLI~D 635 (831)
T 4a0g_A 558 RDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRN--RKIPVIFD 635 (831)
T ss_dssp HHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHH--TTCCEEEE
T ss_pred hhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHH--cCCeEEEE
Confidence 2567777652 11246889999886 888898875 8899999999 99999999
Q ss_pred cccccC-c--ceeccC--cccceEEEecCCCcccCC-CcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCC
Q 015729 176 GVSSIC-A--IDFRMD--EWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPY 249 (401)
Q Consensus 176 ~a~~~~-~--~~~~~~--~~~~di~~~s~~K~l~g~-~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 249 (401)
|++... . ..+..+ ...+|+++++ |.++++ .++|++++++++.+.+....... .+.-| +++
T Consensus 636 EV~tGfGRtG~~fa~e~~gv~PDiitls--K~L~gG~~Plgav~~~~~i~~~~~~~~~~~----------~~~hg--~T~ 701 (831)
T 4a0g_A 636 EVFTGFWRLGVETTTELLGCKPDIACFA--KLLTGGMVPLAVTLATDAVFDSFSGDSKLK----------ALLHG--HSY 701 (831)
T ss_dssp CTTTTTTTTSBSSTHHHHSSCCSEEEEC--GGGGTTSSCCEEEEECHHHHHTTCSSCGGG----------SCCCC--CTT
T ss_pred cCccccccCCCchhhHhcCCCCcEEEEe--cccccCccCcEEEEECHHHHHHHhcccccc----------cceee--cCC
Confidence 988732 1 112112 2347888765 999776 47899999999988775421000 01112 244
Q ss_pred CCcHHHHHHHHHHHHHHHHhcHHHHH-HHHHHH----HHHHHHHHHHcCCccccCCCccCCceeEEEEcCCC--------
Q 015729 250 TPSIQLLYGLRAALDLIFEEGLENVI-ERHRRL----GKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSH-------- 316 (401)
Q Consensus 250 ~~~~~~~~a~~~al~~~~~~g~~~~~-~~~~~~----~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~-------- 316 (401)
+.++..+++..++++.+.++++.... +..... .+.+.+.+.+.. .... ....+.+..+++...
T Consensus 702 ~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~--~v~~--vrg~Gl~~~iel~~~~~~~~~~~ 777 (831)
T 4a0g_A 702 SAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHS--AVQR--VVVIGTLFALELKADASNSGYAS 777 (831)
T ss_dssp TTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHST--TEEE--EEEETTEEEEEEC---------C
T ss_pred cccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCC--Ccee--EeecccEEEEEEecCccccccch
Confidence 56778888899999988765421111 111111 112334444431 1111 112345666776321
Q ss_pred CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 317 INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 317 ~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
..+.++.+.|+++ ||.+++. ++.+||++...+|++|||+++++|++++++++
T Consensus 778 ~~a~~~~~~l~e~-Gv~v~p~-----g~~lrl~pp~~~t~e~id~~~~~l~~~l~~l~ 829 (831)
T 4a0g_A 778 LYAKSLLIMLRED-GIFTRPL-----GNVIYLMCGPCTSPEICRRLLTKLYKRLGEFN 829 (831)
T ss_dssp HHHHHHHHHHHHT-TEECCCB-----TTEEEEECCTTCCHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHC-CcEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 1244688888876 9998754 57999988888899999999999999998764
No 237
>2z8u_A Tata-box-binding protein; transcription, DNA-binding protein, transcription factor, transcription regulation; 1.90A {Methanococcus jannaschii}
Probab=75.86 E-value=30 Score=28.01 Aligned_cols=88 Identities=16% Similarity=0.058 Sum_probs=51.9
Q ss_pred HHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEE---------------
Q 015729 283 KATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFR--------------- 347 (401)
Q Consensus 283 ~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~R--------------- 347 (401)
+.+.+.|+++|+++.....-.-.+.+..+.++..++-+.++..+. +....|..++ +-.+|
T Consensus 85 ~~~~~~L~~lg~~~~~~~~~~I~NIVas~~l~~~i~L~~la~~~~---~~eYePe~fP--gliyR~~~Pk~t~lIF~SGK 159 (188)
T 2z8u_A 85 KKIIKELKDAGIDVIENPEIKIQNMVATADLGIEPNLDDIALMVE---GTEYEPEQFP--GLVYRLDDPKVVVLIFGSGK 159 (188)
T ss_dssp HHHHHHHHHTTCCCCSSCCCEEEEEEEEEECSSCCCHHHHHHHST---TEEECTTTSS--SEEEEEETTEEEEEECTTSE
T ss_pred HHHHHHHHhcCCCccccCceEEEEEEEEEecCCccCHHHHHhhCc---CcEECCccCc--eEEEEeCCCcEEEEEeCCCE
Confidence 334555556677642211111235566677777788878876642 4555544332 21222
Q ss_pred EeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 348 IGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 348 i~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
+.+.+.-+++|+..+++.|-..|++++.
T Consensus 160 iviTGaks~~~~~~A~~~i~~~L~~~~~ 187 (188)
T 2z8u_A 160 VVITGLKSEEDAKRALKKILDTIKEVQE 187 (188)
T ss_dssp EEEESCSCHHHHHHHHHHHHHHHHHHC-
T ss_pred EEEEecCCHHHHHHHHHHHHHHHHHhcc
Confidence 2345556899999999999999987753
No 238
>1mp9_A Tata-binding protein; transcription regulation, DNA-binding protein, transcription factor, DNA binding protein; 2.00A {Sulfolobus acidocaldarius} SCOP: d.129.1.1 d.129.1.1
Probab=67.13 E-value=48 Score=27.04 Aligned_cols=90 Identities=11% Similarity=0.036 Sum_probs=52.4
Q ss_pred HHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEE--------------
Q 015729 282 GKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFR-------------- 347 (401)
Q Consensus 282 ~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~R-------------- 347 (401)
.+.+.+.|+++|+++.....-.-.+.+..+.++..++-+.++..+. +....|..++ +-.+|
T Consensus 84 ~~~i~~~L~~lG~~~~~~~~~~I~NIVas~~l~~~i~L~~la~~~~---~~~YePe~fP--gliyR~~~Pk~t~lIF~SG 158 (198)
T 1mp9_A 84 VKRIIKTLKKYGMQLTGKPKIQIQNIVASANLHVIVNLDKAAFLLE---NNMYEPEQFP--GLIYRMDEPRVVLLIFSSG 158 (198)
T ss_dssp HHHHHHHHHHTTCCCSSCCEEEEEEEEEEEECSSEECHHHHHHHSS---SEECCTTTCS--SEEEEETTTTEEEEECTTS
T ss_pred HHHHHHHHHHcCCcccCcCceEEEEEEEEeeCCCccCHHHHHhhcC---CcEECCccCC--eEEEEeCCCcEEEEEeCCC
Confidence 3345556666777642211111235566667766677777776532 4444433221 11122
Q ss_pred -EeecccCCHHHHHHHHHHHHHHHHhcCCC
Q 015729 348 -IGHLGHLNELQLLGCLAGVEMILKDVGYP 376 (401)
Q Consensus 348 -i~~~~~~~~~di~~~~~~i~~~l~~~~~~ 376 (401)
+.+.+.-+++|+..+++.+-..|++++..
T Consensus 159 KiviTGaks~~~~~~A~~~i~~~L~~~~~~ 188 (198)
T 1mp9_A 159 KMVITGAKREDEVHKAVKKIFDKLVELDCV 188 (198)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHHTTCE
T ss_pred EEEEEecCCHHHHHHHHHHHHHHHHHhCCC
Confidence 23445568999999999999999998864
No 239
>3o2i_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Leptospirillum rubarum}
Probab=64.88 E-value=16 Score=25.51 Aligned_cols=25 Identities=24% Similarity=0.384 Sum_probs=21.2
Q ss_pred CCcEEEEeecccCCHHHHHHHHHHH
Q 015729 342 AGKVFRIGHLGHLNELQLLGCLAGV 366 (401)
Q Consensus 342 ~~~~~Ri~~~~~~~~~di~~~~~~i 366 (401)
.|+..||++.+..++.++...++.+
T Consensus 92 AGGL~~I~~P~E~SK~~V~~~i~~~ 116 (125)
T 3o2i_A 92 AGGLQEIGFPGELSKTEVRRRINAF 116 (125)
T ss_dssp ECCEEEEEEETTCCHHHHHHHHHHH
T ss_pred cCCeEEecCchhhhHHHHHHHHHHH
Confidence 4778999999999999988887765
No 240
>1ais_A TBP, protein (tata-binding protein); hyperthermophIle, ribosome binding, complex (ribosome binding/ DNA); HET: DNA 5IU; 2.10A {Pyrococcus woesei} SCOP: d.129.1.1 d.129.1.1 PDB: 1d3u_A* 1pcz_A
Probab=62.42 E-value=59 Score=26.10 Aligned_cols=87 Identities=11% Similarity=-0.004 Sum_probs=49.3
Q ss_pred HHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEE---------------
Q 015729 282 GKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVF--------------- 346 (401)
Q Consensus 282 ~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~--------------- 346 (401)
.+.+.+.|+++|+++.....-.-.+.+..+.++..++-+.++..+. +....|..++ +-.+
T Consensus 80 ~~~i~~~L~~lG~~~~~~~~~~I~NIVas~~l~~~i~L~~la~~~~---~~~YePe~fp--gli~R~~~pk~~~lIF~SG 154 (182)
T 1ais_A 80 VAKLAQKLKSIGVKFKRAPQIDVQNMVFSGDIGREFNLDVVALTLP---NCEYEPEQFP--GVIYRVKEPKSVILLFSSG 154 (182)
T ss_dssp HHHHHHHHHHTTCCCSSSCEEEEEEEEEEEECSSCCCHHHHHHHST---TEECCTTTCS--SEEEEETTTTEEEEECTTS
T ss_pred HHHHHHHHHHcCCCcccccceEEEEEEEEEEcCCccCHHHHHhhCC---CCEECCccCc--eEEEEeCCCcEEEEEecCC
Confidence 3445556666787642211111234566677777788888876542 3444333221 1111
Q ss_pred EEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 347 RIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 347 Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
++.+.+.-+++|+..+++.+...|+++
T Consensus 155 KiviTGaks~~~~~~a~~~i~~~L~~~ 181 (182)
T 1ais_A 155 KIVCSGAKSEADAWEAVRKLLRELDKY 181 (182)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHTTC
T ss_pred EEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 223445568999999999988887653
No 241
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=58.50 E-value=1.2e+02 Score=28.28 Aligned_cols=28 Identities=14% Similarity=0.088 Sum_probs=21.7
Q ss_pred cEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 344 KVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 344 ~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
+.-||.-.+-.+.+|+.++++.++..-+
T Consensus 397 r~~ria~gsg~~~~~v~~ll~~~~~~~~ 424 (443)
T 3dm5_A 397 RIKRIARGSGTSTKDVKELLDQYRQMKK 424 (443)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCCCCHHHHHHHHHHHHHHHH
Confidence 3468877777899999999988876543
No 242
>2jr2_A UPF0352 protein CPS_2611; dimer, all alpha helix, homodimer, structural genomics, PSI, structure initiative; NMR {Colwellia psychrerythraea} SCOP: a.284.1.1 PDB: 2ota_A
Probab=56.19 E-value=15 Score=24.35 Aligned_cols=43 Identities=9% Similarity=0.099 Sum_probs=36.4
Q ss_pred cCCHHHHHHHHHHHHHHHHhcCCCCCcch-HHHHHHHHHHccCC
Q 015729 353 HLNELQLLGCLAGVEMILKDVGYPVKLGS-GVAAASAYLQNNIP 395 (401)
Q Consensus 353 ~~~~~di~~~~~~i~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~ 395 (401)
-.+.+++|+++..+-.+|++...+.++.- .++|.--.+.+++|
T Consensus 6 KYsd~qvE~ll~eli~VLEKH~Ap~DLSLMvLGN~vTnlln~V~ 49 (76)
T 2jr2_A 6 KYSNERVEKIIQDLLDVLVKEEVTPDLALMCLGNAVTNIIAQVP 49 (76)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTTSC
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHhCC
Confidence 34789999999999999999999999888 58887777766775
No 243
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=54.50 E-value=89 Score=25.66 Aligned_cols=123 Identities=10% Similarity=-0.002 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH-HHHHHHHcCCc---EEEEeCCC
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFN---VDVVESDW 117 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~---~~~v~~~~ 117 (401)
....++.+.+.+..+..+...++=.+.|+......+...+.++.+|+..+....... .....+..|.. +..+..
T Consensus 39 ~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~g-- 116 (221)
T 3dr5_A 39 EMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLS-- 116 (221)
T ss_dssp HHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECS--
T ss_pred HHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEc--
Confidence 344455666666665542224666666776666555555666778888877422222 22334445543 444432
Q ss_pred CCCCChHHHHHHHhccCCCCceEEEEEecCCCccccc-chHHHHHHhhhcCCCcEEEEecccc
Q 015729 118 GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN-NLSKVRKLLDEYRHPALFLVDGVSS 179 (401)
Q Consensus 118 ~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~-~l~~i~~l~~~~~~~~~li~D~a~~ 179 (401)
|..++ +......+..+|++.... .... -++++.++.+ .|.++++|++..
T Consensus 117 ----da~~~---l~~~~~~~fD~V~~d~~~---~~~~~~l~~~~~~Lk---pGG~lv~dn~~~ 166 (221)
T 3dr5_A 117 ----RPLDV---MSRLANDSYQLVFGQVSP---MDLKALVDAAWPLLR---RGGALVLADALL 166 (221)
T ss_dssp ----CHHHH---GGGSCTTCEEEEEECCCT---TTHHHHHHHHHHHEE---EEEEEEETTTTG
T ss_pred ----CHHHH---HHHhcCCCcCeEEEcCcH---HHHHHHHHHHHHHcC---CCcEEEEeCCCC
Confidence 22222 211111345677665321 1111 1333333333 567777787644
No 244
>1wzu_A Quinolinate synthetase A; NAD, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: c.145.1.1 PDB: 2qs0_A
Probab=52.97 E-value=64 Score=28.23 Aligned_cols=85 Identities=13% Similarity=-0.001 Sum_probs=52.4
Q ss_pred CCCeEEEEcCCcchHHHHHHHHHcCCcEEEEe----CCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccccc----
Q 015729 83 PGDRIISFLIGQFSLLWIDQQQRLNFNVDVVE----SDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN---- 154 (401)
Q Consensus 83 ~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~----~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~---- 154 (401)
++++|++....+-+... .+..|.++..++ +.--..++++.+++...+.+ .+.++.||.-+.-++.
T Consensus 137 ~~~~iif~pD~~Lg~~l---~~~~~k~~i~~~~~g~C~vh~~~t~e~i~~~~~~~P----~a~v~~HPEc~~~v~~~aD~ 209 (300)
T 1wzu_A 137 DSDVVIFGPDKNLAHYV---AKMTGKKIIPVPSKGHCYVHQKFTLDDVERAKKLHP----NAKLMIHPECIPEVQEKADI 209 (300)
T ss_dssp SCSEEEEESCHHHHHHH---HHHHCCEEEEC-----------CCHHHHHHHHHHCT----TCEEEECTTSCHHHHHTCSE
T ss_pred CCCeEEEECChhHHHHH---HHHcCCeEEECCCCCcCCCcccCCHHHHHHHHHHCC----CCEEEECCCCCHHHHhhccc
Confidence 67888887764444433 233477766655 22223679999999998754 7889999987644332
Q ss_pred --chHHHHHHhhhcCCCcEEEEec
Q 015729 155 --NLSKVRKLLDEYRHPALFLVDG 176 (401)
Q Consensus 155 --~l~~i~~l~~~~~~~~~li~D~ 176 (401)
+=..|.+.+++ ..-++|.=+
T Consensus 210 vgST~~ii~~~~~--~~~~iv~TE 231 (300)
T 1wzu_A 210 IASTGGMIKRACE--WDEWVVFTE 231 (300)
T ss_dssp ECCHHHHHHHGGG--CSEEEEESC
T ss_pred cCCHHHHHHHHHh--CCCEEEEec
Confidence 34568888887 435555433
No 245
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=49.28 E-value=40 Score=20.16 Aligned_cols=30 Identities=17% Similarity=0.173 Sum_probs=25.0
Q ss_pred EEEEeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 345 VFRIGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 345 ~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
.+|++..+ .++.+-+++...+-+++.++|+
T Consensus 3 rvrisita-rtkkeaekfaailikvfaelgy 32 (62)
T 2gjh_A 3 RVRISITA-RTKKEAEKFAAILIKVFAELGY 32 (62)
T ss_dssp EEEEEEEC-SSHHHHHHHHHHHHHHHHHTTC
T ss_pred eEEEEEEe-cchhHHHHHHHHHHHHHHHhCc
Confidence 47887655 6888899999999999999887
No 246
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=48.82 E-value=15 Score=29.96 Aligned_cols=51 Identities=12% Similarity=0.105 Sum_probs=37.5
Q ss_pred ChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccC
Q 015729 122 KLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSIC 181 (401)
Q Consensus 122 d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~ 181 (401)
+.+.|+++++. ....+++- +|.+..++++.+.++++..-++|+.|-..+++
T Consensus 18 ~~~~l~~al~s----~~~~ifll-----~g~i~~l~~~v~~lk~~~K~v~Vh~Dli~Gls 68 (192)
T 3kts_A 18 NQKDMEKILEL----DLTYMVML-----ETHVAQLKALVKYAQAGGKKVLLHADLVNGLK 68 (192)
T ss_dssp SSHHHHHHTTS----SCCEEEEC-----SEETTTHHHHHHHHHHTTCEEEEEGGGEETCC
T ss_pred CHHHHHHHHcC----CCCEEEEe-----cCcHHHHHHHHHHHHHcCCeEEEecCchhccC
Confidence 78899998874 33566665 46778999999999996555667777766553
No 247
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=45.73 E-value=1.2e+02 Score=24.88 Aligned_cols=86 Identities=13% Similarity=0.097 Sum_probs=52.0
Q ss_pred CeEEEEcC--CcchHH---HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHH
Q 015729 85 DRIISFLI--GQFSLL---WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKV 159 (401)
Q Consensus 85 d~vl~~~~--~~~~~~---~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i 159 (401)
.+|++... ..|... .....+..|.+++..-.+ ..++++.+.+.+ .++.+|.++.....+.....++++
T Consensus 93 ~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~----vp~e~iv~~~~~---~~~d~v~l~~S~l~~~~~~~~~~~ 165 (215)
T 3ezx_A 93 GLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVD----VLNENVVEEAAK---HKGEKVLLVGSALMTTSMLGQKDL 165 (215)
T ss_dssp CEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSS----CCHHHHHHHHHH---TTTSCEEEEEECSSHHHHTHHHHH
T ss_pred CeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCC----CCHHHHHHHHHH---cCCCEEEEEchhcccCcHHHHHHH
Confidence 45665543 333332 456778889887765543 468888777766 467888882222334445567888
Q ss_pred HHHhhhcCC--CcEEEEecc
Q 015729 160 RKLLDEYRH--PALFLVDGV 177 (401)
Q Consensus 160 ~~l~~~~~~--~~~li~D~a 177 (401)
.+.+++... ++.|++=++
T Consensus 166 i~~l~~~~~~~~v~v~vGG~ 185 (215)
T 3ezx_A 166 MDRLNEEKLRDSVKCMFGGA 185 (215)
T ss_dssp HHHHHHTTCGGGSEEEEESS
T ss_pred HHHHHHcCCCCCCEEEEECC
Confidence 887777322 566665543
No 248
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=43.96 E-value=86 Score=26.63 Aligned_cols=98 Identities=14% Similarity=0.083 Sum_probs=51.5
Q ss_pred EEecCChhHHHHHHH-hccCCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhc---cCCCC
Q 015729 63 FLIPTTGTGAWESAL-TNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAA---DTAHT 137 (401)
Q Consensus 63 i~~~~g~t~a~~~~~-~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~---~~~~~ 137 (401)
+++..|++.++=.++ ..+.+.|-+|++.+...-... .....+..|.++..+.+|-. |.+++++.+++ .- .+
T Consensus 11 valVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~---~~~~v~~~~~~~~~~~-G~ 86 (255)
T 4g81_D 11 TALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVT---DELAIEAAFSKLDAEG-IH 86 (255)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTT---CHHHHHHHHHHHHHTT-CC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCC---CHHHHHHHHHHHHHHC-CC
Confidence 444445555555444 567788999888765211111 22233445777777776643 56666665543 21 25
Q ss_pred ceEEEEEecCCCccccc--chHHHHHHhh
Q 015729 138 IKAICIVHNETATGVTN--NLSKVRKLLD 164 (401)
Q Consensus 138 ~~~i~~~~~~n~tG~~~--~l~~i~~l~~ 164 (401)
+.+++-+...+..+.+. +.+++.+..+
T Consensus 87 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~ 115 (255)
T 4g81_D 87 VDILINNAGIQYRKPMVELELENWQKVID 115 (255)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 55555544444444333 3444544444
No 249
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=42.25 E-value=2.2e+02 Score=26.62 Aligned_cols=96 Identities=10% Similarity=0.126 Sum_probs=56.9
Q ss_pred HHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHH
Q 015729 48 LEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVL 126 (401)
Q Consensus 48 ~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l 126 (401)
...++..++..+...|+=.+.|+.+....+...+.....|+..+....-.. ...-+++.|+. +.+-. -|...+
T Consensus 90 s~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~-----~Da~~l 163 (464)
T 3m6w_A 90 AQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQ-----APPRAL 163 (464)
T ss_dssp THHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEEC-----SCHHHH
T ss_pred HHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEE-----CCHHHh
Confidence 344556666665555655666677666666666665557887776322222 33445667877 33322 256555
Q ss_pred HHHHhccCCCCceEEEEEecCCCcccc
Q 015729 127 ASKLAADTAHTIKAICIVHNETATGVT 153 (401)
Q Consensus 127 e~~~~~~~~~~~~~i~~~~~~n~tG~~ 153 (401)
..... .+...|++..|.+.+|.+
T Consensus 164 ~~~~~----~~FD~Il~D~PcSg~G~~ 186 (464)
T 3m6w_A 164 AEAFG----TYFHRVLLDAPCSGEGMF 186 (464)
T ss_dssp HHHHC----SCEEEEEEECCCCCGGGT
T ss_pred hhhcc----ccCCEEEECCCcCCcccc
Confidence 54333 356788888888888865
No 250
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=41.55 E-value=1.4e+02 Score=24.27 Aligned_cols=76 Identities=8% Similarity=-0.066 Sum_probs=42.4
Q ss_pred EEecCChhHHHHH-HHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEE
Q 015729 63 FLIPTTGTGAWES-ALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAI 141 (401)
Q Consensus 63 i~~~~g~t~a~~~-~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i 141 (401)
+++|++ +.++-. +...++..|.+|++.... ........+..+.++..+..|-. |.+.+++.+++.. .....+
T Consensus 4 vlVTGa-s~gIG~~~a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~D~~---~~~~v~~~~~~~~-~~~d~l 76 (230)
T 3guy_A 4 IVITGA-SSGLGAELAKLYDAEGKATYLTGRS--ESKLSTVTNCLSNNVGYRARDLA---SHQEVEQLFEQLD-SIPSTV 76 (230)
T ss_dssp EEEEST-TSHHHHHHHHHHHHTTCCEEEEESC--HHHHHHHHHTCSSCCCEEECCTT---CHHHHHHHHHSCS-SCCSEE
T ss_pred EEEecC-CchHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHhhccCeEeecCC---CHHHHHHHHHHHh-hcCCEE
Confidence 455554 444433 335567788888887652 22233444545556666666543 7888888887532 223444
Q ss_pred EEEe
Q 015729 142 CIVH 145 (401)
Q Consensus 142 ~~~~ 145 (401)
+-+.
T Consensus 77 v~~A 80 (230)
T 3guy_A 77 VHSA 80 (230)
T ss_dssp EECC
T ss_pred EEeC
Confidence 4443
No 251
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=40.31 E-value=2.3e+02 Score=26.37 Aligned_cols=96 Identities=10% Similarity=0.063 Sum_probs=54.8
Q ss_pred HHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHH
Q 015729 49 EDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLA 127 (401)
Q Consensus 49 ~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le 127 (401)
..++..++..+...|+=.+.|+.+....+...+..+..|+..+....-.. ...-+++.|+.-+.+-. -|...+.
T Consensus 95 ~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~-----~Da~~l~ 169 (456)
T 3m4x_A 95 MIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTN-----HAPAELV 169 (456)
T ss_dssp HHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEEC-----CCHHHHH
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEe-----CCHHHhh
Confidence 44556666665554555666666666555555555557887776322222 33445566764222221 2565555
Q ss_pred HHHhccCCCCceEEEEEecCCCcccc
Q 015729 128 SKLAADTAHTIKAICIVHNETATGVT 153 (401)
Q Consensus 128 ~~~~~~~~~~~~~i~~~~~~n~tG~~ 153 (401)
.... .....|++..|.+.+|.+
T Consensus 170 ~~~~----~~FD~Il~DaPCSg~G~~ 191 (456)
T 3m4x_A 170 PHFS----GFFDRIVVDAPCSGEGMF 191 (456)
T ss_dssp HHHT----TCEEEEEEECCCCCGGGT
T ss_pred hhcc----ccCCEEEECCCCCCcccc
Confidence 4443 356788888887888865
No 252
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=40.03 E-value=88 Score=26.90 Aligned_cols=95 Identities=11% Similarity=0.023 Sum_probs=52.6
Q ss_pred EEecCChhHHHHHHH-hccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhc---cCCCCc
Q 015729 63 FLIPTTGTGAWESAL-TNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAA---DTAHTI 138 (401)
Q Consensus 63 i~~~~g~t~a~~~~~-~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~---~~~~~~ 138 (401)
+++|+ ++.+|=.++ ..+.+.|-+|++.+.. .......++..|.+...+.+|-. |.+++++.+++ .- .++
T Consensus 32 alVTG-as~GIG~aiA~~la~~Ga~V~i~~r~--~~~l~~~~~~~g~~~~~~~~Dv~---~~~~v~~~~~~~~~~~-G~i 104 (273)
T 4fgs_A 32 AVITG-ATSGIGLAAAKRFVAEGARVFITGRR--KDVLDAAIAEIGGGAVGIQADSA---NLAELDRLYEKVKAEA-GRI 104 (273)
T ss_dssp EEEES-CSSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHCTTCEEEECCTT---CHHHHHHHHHHHHHHH-SCE
T ss_pred EEEeC-cCCHHHHHHHHHHHHCCCEEEEEECC--HHHHHHHHHHcCCCeEEEEecCC---CHHHHHHHHHHHHHHc-CCC
Confidence 44454 555554444 5678889998887652 22234555666778888877643 56666665543 11 245
Q ss_pred eEEEEEecCCCccccc--chHHHHHHhh
Q 015729 139 KAICIVHNETATGVTN--NLSKVRKLLD 164 (401)
Q Consensus 139 ~~i~~~~~~n~tG~~~--~l~~i~~l~~ 164 (401)
.+++-+...++.+.+. +.+++.+..+
T Consensus 105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~ 132 (273)
T 4fgs_A 105 DVLFVNAGGGSMLPLGEVTEEQYDDTFD 132 (273)
T ss_dssp EEEEECCCCCCCCCTTSCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhccHHHHHHHHH
Confidence 5555444444444333 3444544444
No 253
>2juz_A UPF0352 protein HI0840; homodimer, helix, structural genomics, PSI-2, protein structure initiative; NMR {Haemophilus influenzae} SCOP: a.284.1.1
Probab=39.02 E-value=57 Score=21.91 Aligned_cols=43 Identities=19% Similarity=0.321 Sum_probs=34.8
Q ss_pred cCCHHHHHHHHHHHHHHHHhcCCCCCcch-HHHHHHHHHH-ccCC
Q 015729 353 HLNELQLLGCLAGVEMILKDVGYPVKLGS-GVAAASAYLQ-NNIP 395 (401)
Q Consensus 353 ~~~~~di~~~~~~i~~~l~~~~~~~~~~~-~~~~~~~~~~-~~~~ 395 (401)
-.+.+++|+++..+-.+|++...+.++.- .++|.--.+. .++|
T Consensus 6 KYsd~qvE~ll~eli~VLEKH~Ap~DLSLMvLGN~vTnlln~~V~ 50 (80)
T 2juz_A 6 KYSDAQLSAIVNDMIAVLEKHKAPVDLSLIALGNMASNLLTTSVP 50 (80)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHTTSSC
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHhhcCC
Confidence 34789999999999999999999999988 5777666664 4664
No 254
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=37.93 E-value=1.4e+02 Score=23.14 Aligned_cols=69 Identities=10% Similarity=0.068 Sum_probs=44.3
Q ss_pred HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcC-CCcEEEEec
Q 015729 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYR-HPALFLVDG 176 (401)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~-~~~~li~D~ 176 (401)
.....+..|.+++....+ ..++++.+.+.+ .++.+|.++...+ .....++++.+.+++.. .++.|++=+
T Consensus 38 va~~l~~~G~eVi~lG~~----~p~e~lv~aa~~---~~~diV~lS~~~~--~~~~~~~~~i~~L~~~g~~~i~v~vGG 107 (161)
T 2yxb_A 38 VARALRDAGFEVVYTGLR----QTPEQVAMAAVQ---EDVDVIGVSILNG--AHLHLMKRLMAKLRELGADDIPVVLGG 107 (161)
T ss_dssp HHHHHHHTTCEEECCCSB----CCHHHHHHHHHH---TTCSEEEEEESSS--CHHHHHHHHHHHHHHTTCTTSCEEEEE
T ss_pred HHHHHHHCCCEEEECCCC----CCHHHHHHHHHh---cCCCEEEEEeech--hhHHHHHHHHHHHHhcCCCCCEEEEeC
Confidence 445667788877755433 468888887776 4578888886433 34456777777777732 245555543
No 255
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=37.39 E-value=1.7e+02 Score=24.02 Aligned_cols=82 Identities=11% Similarity=0.065 Sum_probs=44.2
Q ss_pred EEecCChhHHHHH-HHhccCCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhcc--CCCCc
Q 015729 63 FLIPTTGTGAWES-ALTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAAD--TAHTI 138 (401)
Q Consensus 63 i~~~~g~t~a~~~-~~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~--~~~~~ 138 (401)
+++|+ ++.++-. +...+++.|-+|++......... .....+..+.++..+.+|-. |.+.+++.+++- ...++
T Consensus 8 vlITG-as~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~---~~~~~~~~~~~~~~~~~~i 83 (247)
T 3lyl_A 8 ALVTG-ASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNIS---DIESIQNFFAEIKAENLAI 83 (247)
T ss_dssp EEESS-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTT---CHHHHHHHHHHHHHTTCCC
T ss_pred EEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCC---CHHHHHHHHHHHHHHcCCC
Confidence 44554 4555443 33556778888887765322211 22333445677777777643 667666665431 11245
Q ss_pred eEEEEEecCC
Q 015729 139 KAICIVHNET 148 (401)
Q Consensus 139 ~~i~~~~~~n 148 (401)
..++-+....
T Consensus 84 d~li~~Ag~~ 93 (247)
T 3lyl_A 84 DILVNNAGIT 93 (247)
T ss_dssp SEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 6666554433
No 256
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=36.64 E-value=1.8e+02 Score=24.08 Aligned_cols=108 Identities=19% Similarity=0.039 Sum_probs=48.3
Q ss_pred EEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH-HHHHHHHcCC--cEEEEeCCCCCCCChHH-HHHHHhccCCCCc
Q 015729 63 FLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNF--NVDVVESDWGEGAKLDV-LASKLAADTAHTI 138 (401)
Q Consensus 63 i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~--~~~~v~~~~~~~~d~~~-le~~~~~~~~~~~ 138 (401)
++=.+.|+......+...+.++.+|+.++....... .....+..|. ++..+.. |..+ +.....+....+.
T Consensus 64 VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g------da~~~l~~~~~~~~~~~f 137 (242)
T 3r3h_A 64 VLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLG------PALDTLHSLLNEGGEHQF 137 (242)
T ss_dssp EEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEES------CHHHHHHHHHHHHCSSCE
T ss_pred EEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc------CHHHHHHHHhhccCCCCE
Confidence 544444444444444444555678887776322111 2233444554 3555542 2322 2332221001346
Q ss_pred eEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccC
Q 015729 139 KAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSIC 181 (401)
Q Consensus 139 ~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~ 181 (401)
.+|++... ......-++++.++.+ .|.++++|.+...|
T Consensus 138 D~V~~d~~--~~~~~~~l~~~~~~Lk---pGG~lv~d~~~~~g 175 (242)
T 3r3h_A 138 DFIFIDAD--KTNYLNYYELALKLVT---PKGLIAIDNIFWDG 175 (242)
T ss_dssp EEEEEESC--GGGHHHHHHHHHHHEE---EEEEEEEECSSSSS
T ss_pred eEEEEcCC--hHHhHHHHHHHHHhcC---CCeEEEEECCccCC
Confidence 67776643 1111111344444443 56667777665433
No 257
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=36.55 E-value=1.5e+02 Score=25.17 Aligned_cols=79 Identities=13% Similarity=0.049 Sum_probs=40.9
Q ss_pred EEecCChhHHHHHH-HhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHH---HhccCCCCc
Q 015729 63 FLIPTTGTGAWESA-LTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASK---LAADTAHTI 138 (401)
Q Consensus 63 i~~~~g~t~a~~~~-~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~---~~~~~~~~~ 138 (401)
+++|+ ++.++=.. ...++..|.+|++.................+.++..+.+|-. |.+.+++. +.+. .++
T Consensus 34 ~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~---d~~~v~~~~~~~~~~--g~i 107 (273)
T 3uf0_A 34 AVVTG-AGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLA---DLEGAANVAEELAAT--RRV 107 (273)
T ss_dssp EEEET-TTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTT---CHHHHHHHHHHHHHH--SCC
T ss_pred EEEeC-CCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCC---CHHHHHHHHHHHHhc--CCC
Confidence 55554 45555433 355777888888876431111122223334667777777654 55555444 2222 245
Q ss_pred eEEEEEecC
Q 015729 139 KAICIVHNE 147 (401)
Q Consensus 139 ~~i~~~~~~ 147 (401)
.+++-+...
T Consensus 108 D~lv~nAg~ 116 (273)
T 3uf0_A 108 DVLVNNAGI 116 (273)
T ss_dssp CEEEECCCC
T ss_pred cEEEECCCC
Confidence 665555433
No 258
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=36.27 E-value=1.8e+02 Score=23.94 Aligned_cols=75 Identities=11% Similarity=0.025 Sum_probs=42.7
Q ss_pred EEecCChhHHHHHH-HhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEE
Q 015729 63 FLIPTTGTGAWESA-LTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAI 141 (401)
Q Consensus 63 i~~~~g~t~a~~~~-~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i 141 (401)
+++|+ ++.++-.. ...+++.|.+|++..... .......+....++..+.+|-. |.+.+++.+++. .++.++
T Consensus 17 vlVTG-as~gIG~~~a~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~---~~~~~~~~~~~~--~~id~l 88 (249)
T 3f9i_A 17 SLITG-ASSGIGSAIARLLHKLGSKVIISGSNE--EKLKSLGNALKDNYTIEVCNLA---NKEECSNLISKT--SNLDIL 88 (249)
T ss_dssp EEETT-TTSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHCSSEEEEECCTT---SHHHHHHHHHTC--SCCSEE
T ss_pred EEEEC-CCChHHHHHHHHHHHCCCEEEEEcCCH--HHHHHHHHHhccCccEEEcCCC---CHHHHHHHHHhc--CCCCEE
Confidence 55554 45555433 355677888888876532 2223344444555666665543 688888888753 245555
Q ss_pred EEEe
Q 015729 142 CIVH 145 (401)
Q Consensus 142 ~~~~ 145 (401)
+-+.
T Consensus 89 i~~A 92 (249)
T 3f9i_A 89 VCNA 92 (249)
T ss_dssp EECC
T ss_pred EECC
Confidence 5443
No 259
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=36.24 E-value=88 Score=20.75 Aligned_cols=32 Identities=19% Similarity=0.201 Sum_probs=26.9
Q ss_pred CcEEEEeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 343 GKVFRIGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 343 ~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
.+.+|++..+ .++.+-+++...+-+++.++|+
T Consensus 45 akrvrisita-rtkkeaekfaailikvfaelgy 76 (106)
T 1qys_A 45 AKRVRISITA-RTKKEAEKFAAILIKVFAELGY 76 (106)
T ss_dssp CSEEEEEEEC-SSHHHHHHHHHHHHHHHHHTTC
T ss_pred CcEEEEEEEe-cchhHHHHHHHHHHHHHHHhCC
Confidence 4678997665 7888899999999999999887
No 260
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=34.79 E-value=1.9e+02 Score=23.78 Aligned_cols=107 Identities=9% Similarity=0.030 Sum_probs=48.3
Q ss_pred eEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH-HHHHHHHcCC--cEEEEeCCCCCCCChHH-HHHHHhcc-CCC
Q 015729 62 PFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNF--NVDVVESDWGEGAKLDV-LASKLAAD-TAH 136 (401)
Q Consensus 62 ~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~--~~~~v~~~~~~~~d~~~-le~~~~~~-~~~ 136 (401)
.++-.+.|+......+...+.++.+|+..+....... .....+..|. ++..+.. |..+ +.....+. ...
T Consensus 73 ~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g------da~~~l~~l~~~~~~~~ 146 (237)
T 3c3y_A 73 KTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIES------DAMLALDNLLQGQESEG 146 (237)
T ss_dssp EEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES------CHHHHHHHHHHSTTCTT
T ss_pred EEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc------CHHHHHHHHHhccCCCC
Confidence 3655555555554444444555678888876322221 2233344555 3444442 2322 33322110 013
Q ss_pred CceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccc
Q 015729 137 TIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSS 179 (401)
Q Consensus 137 ~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~ 179 (401)
+..+|++.... .....-++.+.++.+ .|.++++|.+..
T Consensus 147 ~fD~I~~d~~~--~~~~~~l~~~~~~L~---pGG~lv~d~~~~ 184 (237)
T 3c3y_A 147 SYDFGFVDADK--PNYIKYHERLMKLVK---VGGIVAYDNTLW 184 (237)
T ss_dssp CEEEEEECSCG--GGHHHHHHHHHHHEE---EEEEEEEECTTG
T ss_pred CcCEEEECCch--HHHHHHHHHHHHhcC---CCeEEEEecCCc
Confidence 45667665321 111111333333333 566777776543
No 261
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=34.37 E-value=1.8e+02 Score=25.64 Aligned_cols=74 Identities=15% Similarity=0.078 Sum_probs=45.8
Q ss_pred cCCCCCeEEEEcCCcch-----HH---HHHHHHHcCCcEEEEeCCCC--CCC------ChHHHHHHHhccCCCCceEEEE
Q 015729 80 TLSPGDRIISFLIGQFS-----LL---WIDQQQRLNFNVDVVESDWG--EGA------KLDVLASKLAADTAHTIKAICI 143 (401)
Q Consensus 80 ~~~~gd~vl~~~~~~~~-----~~---~~~~~~~~g~~~~~v~~~~~--~~~------d~~~le~~~~~~~~~~~~~i~~ 143 (401)
.+++||+|-++.|...- .. .....+..|.+++.-+.-.. +.+ -.++|.+++.. +.+++|+.
T Consensus 8 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~D---p~i~aI~~ 84 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFND---SSVKAILT 84 (327)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHC---TTEEEEEE
T ss_pred CCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhC---CCCCEEEE
Confidence 47899999999885321 11 23455678988887664221 111 23466666654 57899988
Q ss_pred EecCCCcccccch
Q 015729 144 VHNETATGVTNNL 156 (401)
Q Consensus 144 ~~~~n~tG~~~~l 156 (401)
...-.-+-.+.|.
T Consensus 85 ~rGG~g~~rlL~~ 97 (327)
T 4h1h_A 85 VIGGFNSNQLLPY 97 (327)
T ss_dssp SCCCSCGGGGGGG
T ss_pred cCCchhHHHHhhh
Confidence 8666656666653
No 262
>2bmm_A Thermostable hemoglobin from thermobifida fusca; bacterial hemoglobin, thermostable protein, oxygen storage/transport; HET: HEM; 2.48A {Thermobifida fusca}
Probab=34.31 E-value=32 Score=25.36 Aligned_cols=41 Identities=12% Similarity=0.139 Sum_probs=32.6
Q ss_pred cCCHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHcc
Q 015729 353 HLNELQLLGCLAGVEMILKDVGYPVKLGSGVAAASAYLQNN 393 (401)
Q Consensus 353 ~~~~~di~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~ 393 (401)
.+++++.+..++.+.+++++++++.+....+.+....+...
T Consensus 77 ~I~~~~f~~wl~~~~~al~e~~~~~~~~~~~~~~~~~~a~~ 117 (123)
T 2bmm_A 77 RIGAEERDRWLTHMRAAVDDLALPAHLEQQLWEYLVYAAYA 117 (123)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 47999999999999999999998777666666666555443
No 263
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=34.16 E-value=1.9e+02 Score=26.17 Aligned_cols=73 Identities=15% Similarity=0.037 Sum_probs=45.8
Q ss_pred cCCCCCeEEEEcCCcchH-----H---HHHHHHHcCCcEEEEeCCCCC-----CCC---hHHHHHHHhccCCCCceEEEE
Q 015729 80 TLSPGDRIISFLIGQFSL-----L---WIDQQQRLNFNVDVVESDWGE-----GAK---LDVLASKLAADTAHTIKAICI 143 (401)
Q Consensus 80 ~~~~gd~vl~~~~~~~~~-----~---~~~~~~~~g~~~~~v~~~~~~-----~~d---~~~le~~~~~~~~~~~~~i~~ 143 (401)
.+++||+|-++.|+.... . ..+..+..|.+++.-+.-... .-| .++|.+++.. +.+++|+.
T Consensus 39 ~Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~D---p~i~aI~~ 115 (371)
T 3tla_A 39 PLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYN---PDITCIMS 115 (371)
T ss_dssp CCCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTC---TTEEEEEE
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhC---CCCCEEEE
Confidence 478999999999864421 1 233556689988876643221 112 3456666653 57899888
Q ss_pred EecCCCcccccc
Q 015729 144 VHNETATGVTNN 155 (401)
Q Consensus 144 ~~~~n~tG~~~~ 155 (401)
.-.-.-+-.+.|
T Consensus 116 ~rGGyga~rlLp 127 (371)
T 3tla_A 116 TIGGDNSNSLLP 127 (371)
T ss_dssp SCCCSCGGGGGG
T ss_pred ccccccHHHHHh
Confidence 876665666665
No 264
>3lzd_A DPH2; diphthamide biosynthesis, radical SAM enzyme, gene triplicat iron-sulfur cluster, biosynthetic protein; 2.10A {Pyrococcus horikoshii} PDB: 3lzc_A
Probab=33.91 E-value=1e+02 Score=27.94 Aligned_cols=82 Identities=11% Similarity=0.076 Sum_probs=56.5
Q ss_pred CCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcce-eccCcccceEE
Q 015729 117 WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAID-FRMDEWGIDVA 195 (401)
Q Consensus 117 ~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~-~~~~~~~~di~ 195 (401)
.++.++.+...+.+++. +.+-|.+- .|-|.+.+-..|++..++....++|.-|-+++..+.. ......++|++
T Consensus 37 ~~y~fEi~kti~~I~~~---~~krVaLQ---fPdgLl~~a~~Ia~~L~~~~~e~~IlgDttYGACCVDe~aA~~v~aD~l 110 (378)
T 3lzd_A 37 MLHEIPKSEILKELKRI---GAKRVLIQ---SPEGLRREAEELAGFLEENNIEVFLHGEINYGACDPADREAKLVGCDAL 110 (378)
T ss_dssp -CCSCCHHHHHHHHHHT---TCCEEEEE---CCGGGHHHHHHHHHHHHTTTCEEEEECSCCCCTTSCCHHHHHHTTCSEE
T ss_pred ccccccHHHHHHHHHhc---CCCEEEEE---CCHHHHHHHHHHHHHHhhcCceEEEEcCCcccCcccCHHHHhhcCCCEE
Confidence 34557888888878763 34556665 5678888878888877763355777888888877654 22334578999
Q ss_pred EecCCCccc
Q 015729 196 LTGSQKALS 204 (401)
Q Consensus 196 ~~s~~K~l~ 204 (401)
+.-+|-.+.
T Consensus 111 VHyGHsCL~ 119 (378)
T 3lzd_A 111 IHLGHSYMK 119 (378)
T ss_dssp EEEECCCCS
T ss_pred EEcCCCcCC
Confidence 988888775
No 265
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=33.49 E-value=1.9e+02 Score=25.65 Aligned_cols=74 Identities=15% Similarity=0.066 Sum_probs=46.3
Q ss_pred cCCCCCeEEEEcCCcchH-----H---HHHHHHHcCCcEEEEeCCCC--C---CCC---hHHHHHHHhccCCCCceEEEE
Q 015729 80 TLSPGDRIISFLIGQFSL-----L---WIDQQQRLNFNVDVVESDWG--E---GAK---LDVLASKLAADTAHTIKAICI 143 (401)
Q Consensus 80 ~~~~gd~vl~~~~~~~~~-----~---~~~~~~~~g~~~~~v~~~~~--~---~~d---~~~le~~~~~~~~~~~~~i~~ 143 (401)
.+++||+|-++.|+.... . ..+..+..|.+++.-+.-.. + .-| .++|.+++.. +.+++|+.
T Consensus 8 ~L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~D---p~i~aI~~ 84 (331)
T 4e5s_A 8 KLKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRD---PNVKAILT 84 (331)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHC---TTEEEEEE
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhC---CCCCEEEE
Confidence 588999999998854432 1 23455668998887664221 1 112 3466666654 46889888
Q ss_pred EecCCCcccccch
Q 015729 144 VHNETATGVTNNL 156 (401)
Q Consensus 144 ~~~~n~tG~~~~l 156 (401)
.-.-.-+-.+.|.
T Consensus 85 ~rGG~g~~rlL~~ 97 (331)
T 4e5s_A 85 TLGGYNSNGLLKY 97 (331)
T ss_dssp SCCCSCGGGGGGG
T ss_pred ccccccHHHHHhh
Confidence 8766555566653
No 266
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=32.99 E-value=1.8e+02 Score=24.51 Aligned_cols=81 Identities=7% Similarity=0.013 Sum_probs=43.3
Q ss_pred EEecCChhHHHHH-HHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccC--CCC
Q 015729 63 FLIPTTGTGAWES-ALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT--AHT 137 (401)
Q Consensus 63 i~~~~g~t~a~~~-~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~--~~~ 137 (401)
+++|+ ++.++-. +...+++.|-+|++......... .....+..+.++..+.+|-. |.+.+++.+++.. ..+
T Consensus 32 vlITG-as~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~---~~~~v~~~~~~~~~~~g~ 107 (271)
T 4iin_A 32 VLITG-ASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAA---SESDFIEAIQTIVQSDGG 107 (271)
T ss_dssp EEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT---CHHHHHHHHHHHHHHHSS
T ss_pred EEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCC---CHHHHHHHHHHHHHhcCC
Confidence 55554 4545433 33556778888887765222221 22334455777888877644 5666666554310 024
Q ss_pred ceEEEEEecC
Q 015729 138 IKAICIVHNE 147 (401)
Q Consensus 138 ~~~i~~~~~~ 147 (401)
+..++-+...
T Consensus 108 id~li~nAg~ 117 (271)
T 4iin_A 108 LSYLVNNAGV 117 (271)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCc
Confidence 5566555443
No 267
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=32.91 E-value=2.1e+02 Score=23.73 Aligned_cols=80 Identities=9% Similarity=-0.048 Sum_probs=42.4
Q ss_pred EEecCChhHHHHH-HHhccCCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCC-CCce
Q 015729 63 FLIPTTGTGAWES-ALTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTA-HTIK 139 (401)
Q Consensus 63 i~~~~g~t~a~~~-~~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~-~~~~ 139 (401)
+++|++ +.++-. +...+++.|-+|++......... .....+..+.++..+.+|-. |.+.+++.+++-.. .++.
T Consensus 10 vlVTGa-s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~---~~~~v~~~~~~~~~~g~id 85 (252)
T 3h7a_A 10 VAVIGA-GDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDAR---NEDEVTAFLNAADAHAPLE 85 (252)
T ss_dssp EEEECC-SSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTT---CHHHHHHHHHHHHHHSCEE
T ss_pred EEEECC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCC---CHHHHHHHHHHHHhhCCce
Confidence 555554 444443 33556778888888765322221 22233344667888877643 66666665543100 2455
Q ss_pred EEEEEec
Q 015729 140 AICIVHN 146 (401)
Q Consensus 140 ~i~~~~~ 146 (401)
+++-+..
T Consensus 86 ~lv~nAg 92 (252)
T 3h7a_A 86 VTIFNVG 92 (252)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 5554443
No 268
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=32.04 E-value=2e+02 Score=23.29 Aligned_cols=70 Identities=11% Similarity=-0.001 Sum_probs=45.4
Q ss_pred HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcC--CCcEEEEec
Q 015729 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYR--HPALFLVDG 176 (401)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~--~~~~li~D~ 176 (401)
.....+..|.+++....+ ..++++.+.+.+ .++.+|.++... +.....+.++.+.+++.. .++.|++=+
T Consensus 108 va~~l~~~G~~v~~LG~~----vp~~~l~~~~~~---~~~d~v~lS~~~--~~~~~~~~~~i~~l~~~~~~~~~~v~vGG 178 (210)
T 1y80_A 108 VAMMLESGGFTVYNLGVD----IEPGKFVEAVKK---YQPDIVGMSALL--TTTMMNMKSTIDALIAAGLRDRVKVIVGG 178 (210)
T ss_dssp HHHHHHHTTCEEEECCSS----BCHHHHHHHHHH---HCCSEEEEECCS--GGGTHHHHHHHHHHHHTTCGGGCEEEEES
T ss_pred HHHHHHHCCCEEEECCCC----CCHHHHHHHHHH---cCCCEEEEeccc--cccHHHHHHHHHHHHhcCCCCCCeEEEEC
Confidence 455677888888766543 468888887765 356888888643 233456777777777621 236777654
Q ss_pred c
Q 015729 177 V 177 (401)
Q Consensus 177 a 177 (401)
+
T Consensus 179 ~ 179 (210)
T 1y80_A 179 A 179 (210)
T ss_dssp T
T ss_pred C
Confidence 4
No 269
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=31.67 E-value=2.2e+02 Score=23.99 Aligned_cols=85 Identities=11% Similarity=0.040 Sum_probs=52.0
Q ss_pred CCeEEEEcC--CcchHH---HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHH
Q 015729 84 GDRIISFLI--GQFSLL---WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSK 158 (401)
Q Consensus 84 gd~vl~~~~--~~~~~~---~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~ 158 (401)
+.+|++... ..|... .....+..|.+++.+..+ ..++++.+.+.+ .++.+|.++...+ .....+.+
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~----vp~e~l~~~~~~---~~~d~V~lS~l~~--~~~~~~~~ 193 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD----VPAEEVLAAVQK---EKPIMLTGTALMT--TTMYAFKE 193 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE----CCSHHHHHHHHH---HCCSEEEEECCCT--TTTTHHHH
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC----CCHHHHHHHHHH---cCCCEEEEEeecc--CCHHHHHH
Confidence 446666654 222222 456678889988877654 357777776665 3568888886433 33456777
Q ss_pred HHHHhhhcCCCcEEEEecc
Q 015729 159 VRKLLDEYRHPALFLVDGV 177 (401)
Q Consensus 159 i~~l~~~~~~~~~li~D~a 177 (401)
+.+..++...++.|++=++
T Consensus 194 ~i~~l~~~~~~~~v~vGG~ 212 (258)
T 2i2x_B 194 VNDMLLENGIKIPFACGGG 212 (258)
T ss_dssp HHHHHHTTTCCCCEEEEST
T ss_pred HHHHHHhcCCCCcEEEECc
Confidence 7777777334466665443
No 270
>2bkm_A Truncated hemoglobin from geobacillus stearothermophilus; hypothetical protein, oxygen transport, transport, oxygen storage; HET: HEM; 1.5A {Geobacillus stearothermophilus}
Probab=31.63 E-value=54 Score=24.32 Aligned_cols=40 Identities=8% Similarity=0.056 Sum_probs=32.6
Q ss_pred cCCHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHc
Q 015729 353 HLNELQLLGCLAGVEMILKDVGYPVKLGSGVAAASAYLQN 392 (401)
Q Consensus 353 ~~~~~di~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ 392 (401)
.+++++.+..++.+.+++++++++......+.+....+..
T Consensus 79 ~I~~~~fd~wl~~~~~al~e~~~~~~~~~~~~~~~~~~a~ 118 (128)
T 2bkm_A 79 EITPKRAEAWLACMRAAMDEIGLSGPAREQFYHRLVLTAH 118 (128)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 3799999999999999999999887777766666665543
No 271
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=31.20 E-value=42 Score=27.46 Aligned_cols=36 Identities=8% Similarity=0.051 Sum_probs=28.9
Q ss_pred CceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEE
Q 015729 137 TIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLV 174 (401)
Q Consensus 137 ~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~ 174 (401)
+|..+++....|..|.....+++.+++++ ||+.++.
T Consensus 159 ~Pa~vicEi~~~~dG~mar~~~l~~fA~~--h~l~iit 194 (204)
T 1tks_A 159 QPAGVICELVRDEDGLMMRLDDCIQFGKK--HGIKIIN 194 (204)
T ss_dssp CSBEEEEEBBCTTTCCBCBHHHHHHHHHH--HTCCEEE
T ss_pred CceEEEEEEeECCCCCcCCHHHHHHHHHH--cCCcEEE
Confidence 46677776655888999999999999999 7776653
No 272
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=30.85 E-value=90 Score=29.17 Aligned_cols=92 Identities=16% Similarity=0.077 Sum_probs=50.6
Q ss_pred eEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEE
Q 015729 62 PFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAI 141 (401)
Q Consensus 62 ~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i 141 (401)
.+++.++|..|...+ ..+++.|-+|.+.++.... ....+....++ ..+.-. ++.++++ ...++
T Consensus 14 ~vlVvGgG~va~~k~-~~L~~~ga~V~vi~~~~~~-~~~~l~~~~~i--~~~~~~----~~~~~l~---------~~~lV 76 (457)
T 1pjq_A 14 DCLIVGGGDVAERKA-RLLLEAGARLTVNALTFIP-QFTVWANEGML--TLVEGP----FDETLLD---------SCWLA 76 (457)
T ss_dssp EEEEECCSHHHHHHH-HHHHHTTBEEEEEESSCCH-HHHHHHTTTSC--EEEESS----CCGGGGT---------TCSEE
T ss_pred EEEEECCCHHHHHHH-HHHHhCcCEEEEEcCCCCH-HHHHHHhcCCE--EEEECC----CCccccC---------CccEE
Confidence 377778888777654 4566678888888775333 22233332333 333321 2333322 11233
Q ss_pred EEEecCCCcccccchHHHHHHhhhcCCCcEE-EEecc
Q 015729 142 CIVHNETATGVTNNLSKVRKLLDEYRHPALF-LVDGV 177 (401)
Q Consensus 142 ~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~l-i~D~a 177 (401)
+.+ ||.-..-..+.+.|++ .++++ ++|+.
T Consensus 77 i~a-----t~~~~~n~~i~~~a~~--~~i~vn~~d~~ 106 (457)
T 1pjq_A 77 IAA-----TDDDTVNQRVSDAAES--RRIFCNVVDAP 106 (457)
T ss_dssp EEC-----CSCHHHHHHHHHHHHH--TTCEEEETTCT
T ss_pred EEc-----CCCHHHHHHHHHHHHH--cCCEEEECCCc
Confidence 333 2333335679999999 99986 45654
No 273
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=30.78 E-value=2e+02 Score=24.25 Aligned_cols=86 Identities=10% Similarity=-0.030 Sum_probs=44.4
Q ss_pred EEecCChhHHHHHHH-hccCCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccC--CCCc
Q 015729 63 FLIPTTGTGAWESAL-TNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT--AHTI 138 (401)
Q Consensus 63 i~~~~g~t~a~~~~~-~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~--~~~~ 138 (401)
.++..|++.++-.++ ..+...|-+|++......... .....+..+.++..+.+|-. |.+.+++.+++-. -.++
T Consensus 6 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~---d~~~v~~~~~~~~~~~g~i 82 (264)
T 3tfo_A 6 VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVT---DRHSVAAFAQAAVDTWGRI 82 (264)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTT---CHHHHHHHHHHHHHHHSCC
T ss_pred EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCC---CHHHHHHHHHHHHHHcCCC
Confidence 344444555554443 556778888888765322111 22223334667777776643 6666666554310 0245
Q ss_pred eEEEEEecCCCcc
Q 015729 139 KAICIVHNETATG 151 (401)
Q Consensus 139 ~~i~~~~~~n~tG 151 (401)
.+++-+......+
T Consensus 83 D~lVnnAG~~~~~ 95 (264)
T 3tfo_A 83 DVLVNNAGVMPLS 95 (264)
T ss_dssp CEEEECCCCCCCC
T ss_pred CEEEECCCCCCCC
Confidence 6665554433333
No 274
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=30.76 E-value=1.5e+02 Score=24.54 Aligned_cols=94 Identities=12% Similarity=0.047 Sum_probs=49.6
Q ss_pred EEecCChhHHHHH-HHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhc---cCCCCc
Q 015729 63 FLIPTTGTGAWES-ALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAA---DTAHTI 138 (401)
Q Consensus 63 i~~~~g~t~a~~~-~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~---~~~~~~ 138 (401)
+++|+ ++.++=. +...++..|-+|++.... ...........+.++..+.+|-. |.+.+++.+++ .. .++
T Consensus 9 vlVTG-as~gIG~a~a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~Dv~---~~~~v~~~~~~~~~~~-g~i 81 (247)
T 3rwb_A 9 ALVTG-AAQGIGKAIAARLAADGATVIVSDIN--AEGAKAAAASIGKKARAIAADIS---DPGSVKALFAEIQALT-GGI 81 (247)
T ss_dssp EEEET-TTSHHHHHHHHHHHHTTCEEEEECSC--HHHHHHHHHHHCTTEEECCCCTT---CHHHHHHHHHHHHHHH-SCC
T ss_pred EEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHhCCceEEEEcCCC---CHHHHHHHHHHHHHHC-CCC
Confidence 45555 4445443 335567788888887653 22223444445777777776643 66666666543 11 145
Q ss_pred eEEEEEecCCCccccc--chHHHHHHh
Q 015729 139 KAICIVHNETATGVTN--NLSKVRKLL 163 (401)
Q Consensus 139 ~~i~~~~~~n~tG~~~--~l~~i~~l~ 163 (401)
.+++-+....+.+... +.+++.+..
T Consensus 82 d~lv~nAg~~~~~~~~~~~~~~~~~~~ 108 (247)
T 3rwb_A 82 DILVNNASIVPFVAWDDVDLDHWRKII 108 (247)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHH
Confidence 6665554443333322 344444443
No 275
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=30.15 E-value=2.4e+02 Score=24.24 Aligned_cols=77 Identities=10% Similarity=0.020 Sum_probs=43.7
Q ss_pred CCCeEEEEcCCcchHHHHHHHHHcCCcEEEEe-CCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHH
Q 015729 83 PGDRIISFLIGQFSLLWIDQQQRLNFNVDVVE-SDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRK 161 (401)
Q Consensus 83 ~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~-~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~ 161 (401)
++..+++..+ -|++ +++.+|++.+.+. ..++..+.+..+.+.++.-..++++.|+.....++ +-+..
T Consensus 178 ~~~~~v~~H~-af~Y----f~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~~~ 245 (286)
T 3gi1_A 178 RSKTFVTQHT-AFSY----LAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNP-------KIAHA 245 (286)
T ss_dssp SCCEEEEEES-CCHH----HHHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHTTCCEEEECTTSCT-------HHHHH
T ss_pred CCCEEEEECC-chHH----HHHHCCCeEeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHHHH
Confidence 4566666544 3443 3678999887665 33344556666665544322256778777743322 33456
Q ss_pred HhhhcCCCcEEE
Q 015729 162 LLDEYRHPALFL 173 (401)
Q Consensus 162 l~~~~~~~~~li 173 (401)
++++ .|+.++
T Consensus 246 la~~--~g~~v~ 255 (286)
T 3gi1_A 246 IAKS--TGAKVK 255 (286)
T ss_dssp HHHT--TTCEEE
T ss_pred HHHH--hCCeEE
Confidence 7788 787765
No 276
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=30.05 E-value=2.5e+02 Score=24.89 Aligned_cols=73 Identities=11% Similarity=-0.041 Sum_probs=45.7
Q ss_pred cCCCCCeEEEEcCCcchH-----H---HHHHHHHcCCcEEEEeCCCCC-----CCC---hHHHHHHHhccCCCCceEEEE
Q 015729 80 TLSPGDRIISFLIGQFSL-----L---WIDQQQRLNFNVDVVESDWGE-----GAK---LDVLASKLAADTAHTIKAICI 143 (401)
Q Consensus 80 ~~~~gd~vl~~~~~~~~~-----~---~~~~~~~~g~~~~~v~~~~~~-----~~d---~~~le~~~~~~~~~~~~~i~~ 143 (401)
.+++||+|-++.|..... . ..+..+..|.+++.-+.-... .-| .++|.+++.. +.+++|+.
T Consensus 9 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~D---p~i~aI~~ 85 (336)
T 3sr3_A 9 SLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRN---PNVSCIMS 85 (336)
T ss_dssp CCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHC---TTEEEEEE
T ss_pred CCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhC---CCCCEEEE
Confidence 578999999998865321 1 223456689988875542211 112 3466666654 46889888
Q ss_pred EecCCCcccccc
Q 015729 144 VHNETATGVTNN 155 (401)
Q Consensus 144 ~~~~n~tG~~~~ 155 (401)
.-.-.-+-.+.|
T Consensus 86 ~rGG~g~~rlL~ 97 (336)
T 3sr3_A 86 TIGGMNSNSLLP 97 (336)
T ss_dssp SCCCSCGGGGGG
T ss_pred ccccccHHHHhh
Confidence 876665656665
No 277
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=29.94 E-value=1.9e+02 Score=24.18 Aligned_cols=79 Identities=10% Similarity=0.001 Sum_probs=42.8
Q ss_pred EEecCChhHHHHHHH-hccCCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhc---cCCCC
Q 015729 63 FLIPTTGTGAWESAL-TNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAA---DTAHT 137 (401)
Q Consensus 63 i~~~~g~t~a~~~~~-~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~---~~~~~ 137 (401)
+++| |++.++-..+ ..+++.|.+|++......... ........+.++..+.+|-. |.+.+++.+++ .- .+
T Consensus 32 vlIT-Gas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~---~~~~v~~~~~~~~~~~-g~ 106 (262)
T 3rkr_A 32 AVVT-GASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLS---HSDAIAAFATGVLAAH-GR 106 (262)
T ss_dssp EEES-STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTT---CHHHHHHHHHHHHHHH-SC
T ss_pred EEEE-CCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCC---CHHHHHHHHHHHHHhc-CC
Confidence 4444 4555554433 556778888888765322211 22223345667777777644 66666665543 11 24
Q ss_pred ceEEEEEec
Q 015729 138 IKAICIVHN 146 (401)
Q Consensus 138 ~~~i~~~~~ 146 (401)
+.+++-+..
T Consensus 107 id~lv~~Ag 115 (262)
T 3rkr_A 107 CDVLVNNAG 115 (262)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 566665543
No 278
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=29.80 E-value=1.2e+02 Score=25.52 Aligned_cols=78 Identities=12% Similarity=-0.001 Sum_probs=44.0
Q ss_pred EEecCChhHHHHHH-HhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhc---cCCCCc
Q 015729 63 FLIPTTGTGAWESA-LTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAA---DTAHTI 138 (401)
Q Consensus 63 i~~~~g~t~a~~~~-~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~---~~~~~~ 138 (401)
+++| |++.++=.. ...+++.|-+|++.... ........+..+.++..+.+|-. |.+.+++.+++ .. .++
T Consensus 30 vlVT-Gas~gIG~aia~~la~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~Dv~---d~~~v~~~~~~~~~~~-g~i 102 (266)
T 3grp_A 30 ALVT-GATGGIGEAIARCFHAQGAIVGLHGTR--EDKLKEIAADLGKDVFVFSANLS---DRKSIKQLAEVAEREM-EGI 102 (266)
T ss_dssp EEES-STTSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHCSSEEEEECCTT---SHHHHHHHHHHHHHHH-TSC
T ss_pred EEEe-CCCcHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHhCCceEEEEeecC---CHHHHHHHHHHHHHHc-CCC
Confidence 4444 455555443 35567788888887652 22233445556777888877643 66666665543 11 245
Q ss_pred eEEEEEecC
Q 015729 139 KAICIVHNE 147 (401)
Q Consensus 139 ~~i~~~~~~ 147 (401)
.+++-+...
T Consensus 103 D~lvnnAg~ 111 (266)
T 3grp_A 103 DILVNNAGI 111 (266)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 555555433
No 279
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=29.58 E-value=1.8e+02 Score=21.77 Aligned_cols=71 Identities=15% Similarity=0.067 Sum_probs=45.6
Q ss_pred HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcC-CCcEEEEecc
Q 015729 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYR-HPALFLVDGV 177 (401)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~-~~~~li~D~a 177 (401)
.....+..|.+++..-.+ ..++++.+++.+ .++.++.++...++ ....++++.+..++.. .++.|++=++
T Consensus 23 v~~~l~~~G~~Vi~lG~~----~p~e~~v~~a~~---~~~d~v~lS~~~~~--~~~~~~~~i~~l~~~g~~~i~v~vGG~ 93 (137)
T 1ccw_A 23 LDHAFTNAGFNVVNIGVL----SPQELFIKAAIE---TKADAILVSSLYGQ--GEIDCKGLRQKCDEAGLEGILLYVGGN 93 (137)
T ss_dssp HHHHHHHTTCEEEEEEEE----ECHHHHHHHHHH---HTCSEEEEEECSST--HHHHHTTHHHHHHHTTCTTCEEEEEES
T ss_pred HHHHHHHCCCEEEECCCC----CCHHHHHHHHHh---cCCCEEEEEecCcC--cHHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 446778889988876543 468888777765 35688888865432 2334666777666622 3677776654
Q ss_pred c
Q 015729 178 S 178 (401)
Q Consensus 178 ~ 178 (401)
.
T Consensus 94 ~ 94 (137)
T 1ccw_A 94 I 94 (137)
T ss_dssp C
T ss_pred C
Confidence 3
No 280
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=29.45 E-value=1.7e+02 Score=25.66 Aligned_cols=62 Identities=5% Similarity=-0.002 Sum_probs=39.7
Q ss_pred HHHHcCCcEEEEe-CCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEE
Q 015729 102 QQQRLNFNVDVVE-SDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALF 172 (401)
Q Consensus 102 ~~~~~g~~~~~v~-~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~l 172 (401)
+++.+|++...+. +..+..+.+..+.+.++.-..++++.|+.....++ +-+..++++ .|+.+
T Consensus 203 fa~~yGl~~~~~~~i~~~~ePs~~~l~~l~~~ik~~~v~~If~e~~~~~-------k~~~~ia~e--~g~~v 265 (307)
T 3ujp_A 203 LARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSD-------KGQKQVAQA--TGARF 265 (307)
T ss_dssp HHHHTTCEEEEEESSCCSSCCCHHHHHHHHHHHHTTTCSEEEEETTSCS-------HHHHHTTTT--TCCEE
T ss_pred HHHHCCCcEEEeeccCCCCCCCHHHHHHHHHHHHhcCCcEEEEeCCCCh-------HHHHHHHHH--hCCce
Confidence 4688999877654 45555566776666555322257788888753332 456677888 77765
No 281
>2jpq_A UPF0352 protein VP2129; dimer, all alpha, homodimer, structural genomics, PSI-2, protein structure initiative; NMR {Vibrio parahaemolyticus} SCOP: a.284.1.1
Probab=28.73 E-value=81 Score=21.32 Aligned_cols=43 Identities=14% Similarity=0.159 Sum_probs=33.5
Q ss_pred cCCHHHHHHHHHHHHHHHHhcCCCCCcch-HHHHHHHHH-HccCC
Q 015729 353 HLNELQLLGCLAGVEMILKDVGYPVKLGS-GVAAASAYL-QNNIP 395 (401)
Q Consensus 353 ~~~~~di~~~~~~i~~~l~~~~~~~~~~~-~~~~~~~~~-~~~~~ 395 (401)
-.+.+++|.++..+-.+|++...+.++.- .++|.--.+ ..++|
T Consensus 6 KYsd~qvE~ll~eli~VLEKH~Ap~DLSLMvLGNmvTNlln~~V~ 50 (83)
T 2jpq_A 6 KYTDEQVEKILAEVALVLEKHAASPELTLMIAGNIATNVLNQRVA 50 (83)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTSC
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHhhcCC
Confidence 34789999999999999999999988887 466655555 44554
No 282
>2juw_A UPF0352 protein SO_2176; homodimer, helix, dimer, all alpha, northeast structural GEN consortium, NESG, structural genomics; NMR {Shewanella oneidensis} SCOP: a.284.1.1 PDB: 2qti_A
Probab=28.60 E-value=82 Score=21.15 Aligned_cols=43 Identities=16% Similarity=0.310 Sum_probs=33.8
Q ss_pred cCCHHHHHHHHHHHHHHHHhcCCCCCcch-HHHHHHHHH-HccCC
Q 015729 353 HLNELQLLGCLAGVEMILKDVGYPVKLGS-GVAAASAYL-QNNIP 395 (401)
Q Consensus 353 ~~~~~di~~~~~~i~~~l~~~~~~~~~~~-~~~~~~~~~-~~~~~ 395 (401)
-.+.+++|+++..+-.+|++...+.++.- .+++.--.+ ..++|
T Consensus 6 KYsd~qvE~ll~eli~VLEKH~Ap~DLSLMvLGN~vTnlln~~V~ 50 (80)
T 2juw_A 6 KYSNTQVESLIAEILVVLEKHKAPTDLSLMALGNCVTHLLERKVP 50 (80)
T ss_dssp SSCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTSC
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHhhcCC
Confidence 34789999999999999999999988888 466665555 44554
No 283
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=28.54 E-value=1.7e+02 Score=24.88 Aligned_cols=74 Identities=11% Similarity=0.030 Sum_probs=43.2
Q ss_pred EEecCChhHHHHH-HHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEE
Q 015729 63 FLIPTTGTGAWES-ALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAI 141 (401)
Q Consensus 63 i~~~~g~t~a~~~-~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i 141 (401)
+++|++ +.++-. +...+++.|-+|++.... ........+..+.++..+.+|-. |++.+++.+++. .++.++
T Consensus 19 vlVTGa-s~gIG~~~a~~L~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~Dl~---d~~~v~~~~~~~--~~iD~l 90 (291)
T 3rd5_A 19 VVITGA-NSGLGAVTARELARRGATVIMAVRD--TRKGEAAARTMAGQVEVRELDLQ---DLSSVRRFADGV--SGADVL 90 (291)
T ss_dssp EEEECC-SSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHTTSSSEEEEEECCTT---CHHHHHHHHHTC--CCEEEE
T ss_pred EEEeCC-CChHHHHHHHHHHHCCCEEEEEECC--HHHHHHHHHHhcCCeeEEEcCCC---CHHHHHHHHHhc--CCCCEE
Confidence 555554 444433 335567788888887652 22223444445667777777643 788888888753 244554
Q ss_pred EEE
Q 015729 142 CIV 144 (401)
Q Consensus 142 ~~~ 144 (401)
+-+
T Consensus 91 v~n 93 (291)
T 3rd5_A 91 INN 93 (291)
T ss_dssp EEC
T ss_pred EEC
Confidence 444
No 284
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=28.37 E-value=2.1e+02 Score=24.18 Aligned_cols=83 Identities=11% Similarity=0.015 Sum_probs=45.6
Q ss_pred EEecCChhHHHHHH-HhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccC--CCCce
Q 015729 63 FLIPTTGTGAWESA-LTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT--AHTIK 139 (401)
Q Consensus 63 i~~~~g~t~a~~~~-~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~--~~~~~ 139 (401)
+++|+ ++.++=.+ ...+++.|.+|++.+... ..........+.++..+.+|-. |.+.+++.+++-. -.++.
T Consensus 30 vlVTG-as~GIG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dv~---d~~~v~~~~~~~~~~~g~iD 103 (277)
T 4dqx_A 30 CIVTG-GGSGIGRATAELFAKNGAYVVVADVNE--DAAVRVANEIGSKAFGVRVDVS---SAKDAESMVEKTTAKWGRVD 103 (277)
T ss_dssp EEEET-TTSHHHHHHHHHHHHTTCEEEEEESSH--HHHHHHHHHHCTTEEEEECCTT---CHHHHHHHHHHHHHHHSCCC
T ss_pred EEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHhCCceEEEEecCC---CHHHHHHHHHHHHHHcCCCC
Confidence 45554 45555443 355777888888876532 2223444555777777777643 6776666654310 01456
Q ss_pred EEEEEecCCCcc
Q 015729 140 AICIVHNETATG 151 (401)
Q Consensus 140 ~i~~~~~~n~tG 151 (401)
+++-+......+
T Consensus 104 ~lv~nAg~~~~~ 115 (277)
T 4dqx_A 104 VLVNNAGFGTTG 115 (277)
T ss_dssp EEEECCCCCCCB
T ss_pred EEEECCCcCCCC
Confidence 665554433333
No 285
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=28.13 E-value=2e+02 Score=24.33 Aligned_cols=97 Identities=13% Similarity=0.047 Sum_probs=47.9
Q ss_pred EEecCChhHHHHH-HHhccCCCCCeEEEEcCCcc----------hHH---HHHHHHHcCCcEEEEeCCCCCCCChHHHHH
Q 015729 63 FLIPTTGTGAWES-ALTNTLSPGDRIISFLIGQF----------SLL---WIDQQQRLNFNVDVVESDWGEGAKLDVLAS 128 (401)
Q Consensus 63 i~~~~g~t~a~~~-~~~~~~~~gd~vl~~~~~~~----------~~~---~~~~~~~~g~~~~~v~~~~~~~~d~~~le~ 128 (401)
+++|+ ++.++=. +...++..|.+|++.+.... ... .....+..+.++..+.+|-. |.+.+++
T Consensus 13 vlVTG-as~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~---~~~~v~~ 88 (287)
T 3pxx_A 13 VLVTG-GARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVR---DRAAVSR 88 (287)
T ss_dssp EEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTT---CHHHHHH
T ss_pred EEEeC-CCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCC---CHHHHHH
Confidence 45554 4445443 33557778888888754210 111 12223445667777777643 6666665
Q ss_pred HHhccC--CCCceEEEEEecCCCcccccchHHHHHHh
Q 015729 129 KLAADT--AHTIKAICIVHNETATGVTNNLSKVRKLL 163 (401)
Q Consensus 129 ~~~~~~--~~~~~~i~~~~~~n~tG~~~~l~~i~~l~ 163 (401)
.+++-. -.++.+++-+......+...+.+.+.+..
T Consensus 89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~ 125 (287)
T 3pxx_A 89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAF 125 (287)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHH
T ss_pred HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHh
Confidence 554210 01455555554433333223444444433
No 286
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=27.85 E-value=2.7e+02 Score=23.30 Aligned_cols=78 Identities=14% Similarity=0.020 Sum_probs=47.6
Q ss_pred CCeEEEE-cCCcchHHHHHHHHHcCCcEEEEeCC--------CCCCCChHHHHHHHhccCCCCceEEEEEecCCCccccc
Q 015729 84 GDRIISF-LIGQFSLLWIDQQQRLNFNVDVVESD--------WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN 154 (401)
Q Consensus 84 gd~vl~~-~~~~~~~~~~~~~~~~g~~~~~v~~~--------~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~ 154 (401)
+.+++.. +.++... +....+..++.+..+++. ....+++++..++++. -+++.++.+|...-.-...
T Consensus 160 ~~~i~~~GDt~~~~~-~~~~~~~~~~Dv~il~~g~~~~~~~~~~~hm~~~ea~~~~~~---l~~~~vi~~H~~~~~~~~~ 235 (264)
T 3rpc_A 160 EPTVYLVGDTVWTSD-VEKALLRFDPNVIIMNTGYAQILGFEDSIIMGTKDIGRMVVR---KPEAKIIAVHMDTVNHTAT 235 (264)
T ss_dssp SCCEEECCSCCSCHH-HHHHHHHHCCSEEEEECSCBCBTTCSSCSSCCHHHHHHHHHH---CTTSEEEEESCSSSTTBCS
T ss_pred ccEEEEECCcCchHH-HHHHHHHhCCCEEEEecCccccccccCCcccCHHHHHHHHHh---CCcCeEEEEcccccccccc
Confidence 3455544 3444433 335556667888888875 2345777777776654 2457788887653222334
Q ss_pred chHHHHHHhhh
Q 015729 155 NLSKVRKLLDE 165 (401)
Q Consensus 155 ~l~~i~~l~~~ 165 (401)
+.+++.+.+++
T Consensus 236 ~~~~l~~~~~~ 246 (264)
T 3rpc_A 236 SRKDVRKFIKG 246 (264)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 67788888777
No 287
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=27.85 E-value=49 Score=28.68 Aligned_cols=80 Identities=11% Similarity=0.109 Sum_probs=44.0
Q ss_pred CCeEEEEcCCcchHHHHHHHHHcCCcEEEEe-CCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHH
Q 015729 84 GDRIISFLIGQFSLLWIDQQQRLNFNVDVVE-SDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKL 162 (401)
Q Consensus 84 gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~-~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l 162 (401)
+.+.+++...-|++ +++.+|++.+.+. +..+..+.+..+.+.++.-..++++.|+.....++ -..+.|.+.
T Consensus 162 ~~~~~vt~H~af~Y----~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~----~~~~~l~~~ 233 (282)
T 3mfq_A 162 ESRYLVTPHDAFNY----FAASYDFTLYAPQGVSTDSEVANSDMIETVNLIIDHNIKAIFTESTTNP----ERMKKLQEA 233 (282)
T ss_dssp GGCEEECSSSCCHH----HHHHTTCEEECSSCSSSCSCCCHHHHHHHHHHHHHHTCCEEECBTTSCT----HHHHHHHHH
T ss_pred cCcEEEEECchHHH----HHHHCCCeEecccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh----HHHHHHHHH
Confidence 44555554333443 3678899876442 33444456666666544321145677776532221 125667888
Q ss_pred hhhcCCCcEEE
Q 015729 163 LDEYRHPALFL 173 (401)
Q Consensus 163 ~~~~~~~~~li 173 (401)
+++ .|+.++
T Consensus 234 a~~--~g~~v~ 242 (282)
T 3mfq_A 234 VKA--KGGQVE 242 (282)
T ss_dssp HHT--TSCCCE
T ss_pred HHh--cCCceE
Confidence 888 776443
No 288
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=27.65 E-value=2.4e+02 Score=22.68 Aligned_cols=149 Identities=14% Similarity=0.129 Sum_probs=66.6
Q ss_pred CChHHHHHHHccCcCCCCC-ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchH
Q 015729 19 HIPDQVIRAMNRNNEDYRS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSL 97 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~~~~-~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~ 97 (401)
.-++.+++++.++...... ........++...+.... .+..++=.+.|+......+...+.++.+|+.++......
T Consensus 20 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~---~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~ 96 (221)
T 3u81_A 20 GDPQSVLEAIDTYCTQKEWAMNVGDAKGQIMDAVIREY---SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCA 96 (221)
T ss_dssp TCHHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHH---CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHH
T ss_pred CCHHHHHHHHHHHhhhcCcCcccCHHHHHHHHHHHHhc---CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHH
Confidence 3455666666664322111 111222223333333333 233365566666655555555566677888888743222
Q ss_pred H-HHHHHHHcCC--cEEEEeCCCCCCCChHHHHHHHhc-cCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEE
Q 015729 98 L-WIDQQQRLNF--NVDVVESDWGEGAKLDVLASKLAA-DTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFL 173 (401)
Q Consensus 98 ~-~~~~~~~~g~--~~~~v~~~~~~~~d~~~le~~~~~-~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li 173 (401)
. ....++..|. ++..+..+ ..++-..+.. ....+..+|++.... ....+..++.+.++....|..++
T Consensus 97 ~~a~~~~~~~~~~~~v~~~~~d------~~~~l~~~~~~~~~~~fD~V~~d~~~---~~~~~~~~~~~~~~~LkpgG~lv 167 (221)
T 3u81_A 97 AITQQMLNFAGLQDKVTILNGA------SQDLIPQLKKKYDVDTLDMVFLDHWK---DRYLPDTLLLEKCGLLRKGTVLL 167 (221)
T ss_dssp HHHHHHHHHHTCGGGEEEEESC------HHHHGGGTTTTSCCCCCSEEEECSCG---GGHHHHHHHHHHTTCCCTTCEEE
T ss_pred HHHHHHHHHcCCCCceEEEECC------HHHHHHHHHHhcCCCceEEEEEcCCc---ccchHHHHHHHhccccCCCeEEE
Confidence 2 2233344554 35555432 2221111110 000245677766422 11222223333333344666777
Q ss_pred Eecccc
Q 015729 174 VDGVSS 179 (401)
Q Consensus 174 ~D~a~~ 179 (401)
+|.+..
T Consensus 168 ~~~~~~ 173 (221)
T 3u81_A 168 ADNVIV 173 (221)
T ss_dssp ESCCCC
T ss_pred EeCCCC
Confidence 776643
No 289
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=27.24 E-value=2.2e+02 Score=24.02 Aligned_cols=82 Identities=12% Similarity=-0.023 Sum_probs=42.7
Q ss_pred EEecCChhHHHHHH-HhccCCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccC--CCCc
Q 015729 63 FLIPTTGTGAWESA-LTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT--AHTI 138 (401)
Q Consensus 63 i~~~~g~t~a~~~~-~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~--~~~~ 138 (401)
+++|+ ++.++-.. ...+++.|-+|++......... .....+..+.++..+.+|-. |.+.+++.+++-. -.++
T Consensus 35 ~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~---d~~~v~~~~~~~~~~~g~i 110 (276)
T 3r1i_A 35 ALITG-ASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVT---QPDQVRGMLDQMTGELGGI 110 (276)
T ss_dssp EEEES-TTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTT---CHHHHHHHHHHHHHHHSCC
T ss_pred EEEeC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCC---CHHHHHHHHHHHHHHcCCC
Confidence 45554 44455433 3556778888887765322221 22223345666777776643 6666666655310 0145
Q ss_pred eEEEEEecCC
Q 015729 139 KAICIVHNET 148 (401)
Q Consensus 139 ~~i~~~~~~n 148 (401)
.+++-+....
T Consensus 111 D~lvnnAg~~ 120 (276)
T 3r1i_A 111 DIAVCNAGIV 120 (276)
T ss_dssp SEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 5665554433
No 290
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=27.20 E-value=2.4e+02 Score=24.64 Aligned_cols=91 Identities=10% Similarity=-0.042 Sum_probs=45.7
Q ss_pred EEecCC-hhHHHHHHHhccCCCCCeEEEEcCCc--chHHHH--HHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCC
Q 015729 63 FLIPTT-GTGAWESALTNTLSPGDRIISFLIGQ--FSLLWI--DQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHT 137 (401)
Q Consensus 63 i~~~~g-~t~a~~~~~~~~~~~gd~vl~~~~~~--~~~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~ 137 (401)
++++++ |.-+-. ++..+++.|.+|.+..... ...... ......+++++..++. |.+.+++++++ .+
T Consensus 13 IlVtGatG~iG~~-l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~-----d~~~l~~~~~~---~~ 83 (346)
T 3i6i_A 13 VLIAGATGFIGQF-VATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLIN-----EQEAMEKILKE---HE 83 (346)
T ss_dssp EEEECTTSHHHHH-HHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTT-----CHHHHHHHHHH---TT
T ss_pred EEEECCCcHHHHH-HHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecC-----CHHHHHHHHhh---CC
Confidence 555543 333322 2344555666676665422 111111 1122345555544433 78999999874 13
Q ss_pred ceEEEEEecCCCcccccchHHHHHHhhh
Q 015729 138 IKAICIVHNETATGVTNNLSKVRKLLDE 165 (401)
Q Consensus 138 ~~~i~~~~~~n~tG~~~~l~~i~~l~~~ 165 (401)
+..|+-+...+ .+..-..+.+.|++
T Consensus 84 ~d~Vi~~a~~~---n~~~~~~l~~aa~~ 108 (346)
T 3i6i_A 84 IDIVVSTVGGE---SILDQIALVKAMKA 108 (346)
T ss_dssp CCEEEECCCGG---GGGGHHHHHHHHHH
T ss_pred CCEEEECCchh---hHHHHHHHHHHHHH
Confidence 45555443321 22334678888888
No 291
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=26.93 E-value=1.7e+02 Score=24.77 Aligned_cols=65 Identities=12% Similarity=0.045 Sum_probs=29.9
Q ss_pred EecCChhHHHHHHH-hccCCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHh
Q 015729 64 LIPTTGTGAWESAL-TNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLA 131 (401)
Q Consensus 64 ~~~~g~t~a~~~~~-~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~ 131 (401)
++..|++.+|=.++ ..+...|-+|++.+...-... .....+..|.++..+.+|-. |.+++++.++
T Consensus 10 alVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt---~~~~v~~~~~ 76 (254)
T 4fn4_A 10 VIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVS---KKKDVEEFVR 76 (254)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT---SHHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCC---CHHHHHHHHH
Confidence 33334444444333 445566767666654211111 12223344566666665533 4555554443
No 292
>1s69_A Cyanoglobin, hemoglobin, HB; on 2 helical fold, heme, iron, cyanoba oxygen binding, hexacoordinate, truncated, oxygen storage-T complex; HET: FLC HEM; 1.68A {Synechocystis SP} SCOP: a.1.1.1 PDB: 1s6a_A* 1mwb_A* 1rtx_A* 2hz1_A* 2hz3_A* 2hz2_A*
Probab=26.78 E-value=28 Score=25.73 Aligned_cols=37 Identities=27% Similarity=0.262 Sum_probs=30.5
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHH
Q 015729 354 LNELQLLGCLAGVEMILKDVGYPVKLGSGVAAASAYL 390 (401)
Q Consensus 354 ~~~~di~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~ 390 (401)
+++++.+..++.+.+++++++++.+...++.++...+
T Consensus 79 I~~~~f~~wl~~l~~al~e~~~~~~~~~~~~~~~~~~ 115 (124)
T 1s69_A 79 LNGEHFDAVAEDLLATLKEMGVPEDLIAEVAAVAGAP 115 (124)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHCH
T ss_pred cCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhh
Confidence 7999999999999999999987766666666666555
No 293
>1dlw_A Hemoglobin; oxygen storage/transport complex; HET: HEM; 1.54A {Paramecium caudatum} SCOP: a.1.1.1 PDB: 1uvy_A*
Probab=26.68 E-value=32 Score=25.08 Aligned_cols=38 Identities=13% Similarity=0.164 Sum_probs=29.9
Q ss_pred cCCHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHH
Q 015729 353 HLNELQLLGCLAGVEMILKDVGYPVKLGSGVAAASAYL 390 (401)
Q Consensus 353 ~~~~~di~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~ 390 (401)
.+++++.+..++.+.+++++++++.+....+.+..+.+
T Consensus 72 ~I~~~~f~~wl~~~~~al~~~~~~~~~~~~~~~~~~~~ 109 (116)
T 1dlw_A 72 GVSNAQFTTVIGHLRSALTGAGVAAALVEQTVAVAETV 109 (116)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTT
T ss_pred CcCHHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHH
Confidence 47999999999999999999987766665555555444
No 294
>1vd2_A Protein kinase C, IOTA type; PB1 domain, OPCA motif, APKC, ZIP/P62, MEK5, molecular recognition, transferase; NMR {Homo sapiens} SCOP: d.15.2.2 PDB: 1wmh_A
Probab=26.40 E-value=1.6e+02 Score=20.35 Aligned_cols=55 Identities=9% Similarity=0.093 Sum_probs=36.8
Q ss_pred eeEEEEcCCCCCHHHHHHHHHhhCCeEE-----ccCCCCCCCcEEEEeecccCCHHHHHHHHHHHH
Q 015729 307 TVTAVIVPSHINSSEIVRRAWQRYNLSL-----GLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVE 367 (401)
Q Consensus 307 ~~~~~~~~~~~~~~~l~~~L~~~~~i~v-----~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~ 367 (401)
-++.+.+|..++-++++..+.+.+++.- ....+. .|..+.|+ +.+|++.+++..+
T Consensus 16 di~~~~v~~~i~~~~L~~kv~~~~~~~~~~~f~lky~DE-eGD~itis-----Sd~EL~eAl~l~~ 75 (89)
T 1vd2_A 16 DIMITHFEPSISFEGLCNEVRDMCSFDNEQLFTMKWIDE-EGDPCTVS-----SQLELEEAFRLYE 75 (89)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHTTCCSSCCEEEEECCS-SSCCEECC-----SHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEEEECC-CCCccccc-----CHHHHHHHHHHHH
Confidence 3667778878888999999988777531 111111 35556664 8899999887654
No 295
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=26.19 E-value=2.9e+02 Score=23.20 Aligned_cols=80 Identities=8% Similarity=-0.098 Sum_probs=42.8
Q ss_pred EEecCChhHHHHHH-HhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccC--CCC
Q 015729 63 FLIPTTGTGAWESA-LTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT--AHT 137 (401)
Q Consensus 63 i~~~~g~t~a~~~~-~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~--~~~ 137 (401)
+++|+ ++.++-.. ...+++.|-+|++......... ...+....+.++..+.+|-. |.+.+++.+++-. -.+
T Consensus 30 ~lVTG-as~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~---~~~~v~~~~~~~~~~~g~ 105 (277)
T 4fc7_A 30 AFITG-GGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVR---APPAVMAAVDQALKEFGR 105 (277)
T ss_dssp EEEET-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTT---CHHHHHHHHHHHHHHHSC
T ss_pred EEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCC---CHHHHHHHHHHHHHHcCC
Confidence 45555 45555443 3567788888888765322211 22233334677888877643 6666666554310 014
Q ss_pred ceEEEEEec
Q 015729 138 IKAICIVHN 146 (401)
Q Consensus 138 ~~~i~~~~~ 146 (401)
+.+++-+..
T Consensus 106 id~lv~nAg 114 (277)
T 4fc7_A 106 IDILINCAA 114 (277)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCc
Confidence 555555543
No 296
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=26.16 E-value=2.3e+02 Score=23.90 Aligned_cols=83 Identities=12% Similarity=0.043 Sum_probs=43.5
Q ss_pred EEecCChhHHHHHH-HhccCCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccC--CCCc
Q 015729 63 FLIPTTGTGAWESA-LTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT--AHTI 138 (401)
Q Consensus 63 i~~~~g~t~a~~~~-~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~--~~~~ 138 (401)
+++|+ ++.++-.. ...++..|-+|++......... .....+..+.++..+.+|-. |.+.+++.+++-. -.++
T Consensus 27 ~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~---d~~~v~~~~~~~~~~~g~i 102 (279)
T 3sju_A 27 AFVTG-VSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVT---STDEVHAAVAAAVERFGPI 102 (279)
T ss_dssp EEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTT---CHHHHHHHHHHHHHHHCSC
T ss_pred EEEeC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCC---CHHHHHHHHHHHHHHcCCC
Confidence 55555 45555433 3556778888888765322111 12223334667777777643 6776666554310 0245
Q ss_pred eEEEEEecCCC
Q 015729 139 KAICIVHNETA 149 (401)
Q Consensus 139 ~~i~~~~~~n~ 149 (401)
.+++-+.....
T Consensus 103 d~lv~nAg~~~ 113 (279)
T 3sju_A 103 GILVNSAGRNG 113 (279)
T ss_dssp CEEEECCCCCC
T ss_pred cEEEECCCCCC
Confidence 56555544333
No 297
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=26.14 E-value=2.7e+02 Score=22.87 Aligned_cols=80 Identities=5% Similarity=0.033 Sum_probs=42.0
Q ss_pred EEecCChhHHHHHH-HhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccC--CCC
Q 015729 63 FLIPTTGTGAWESA-LTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT--AHT 137 (401)
Q Consensus 63 i~~~~g~t~a~~~~-~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~--~~~ 137 (401)
+++|+ ++.++=.. ...+++.|.+|++......... .....+..+.++..+.+|-. |.+.+++.+++-. -.+
T Consensus 7 ~lVTG-as~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~---d~~~v~~~~~~~~~~~g~ 82 (246)
T 3osu_A 7 ALVTG-ASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA---DADEVKAMIKEVVSQFGS 82 (246)
T ss_dssp EEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTT---CHHHHHHHHHHHHHHHSC
T ss_pred EEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCC---CHHHHHHHHHHHHHHcCC
Confidence 45554 45555433 3557778888877654222211 22233445677777777643 6666666654310 014
Q ss_pred ceEEEEEec
Q 015729 138 IKAICIVHN 146 (401)
Q Consensus 138 ~~~i~~~~~ 146 (401)
+.+++-+..
T Consensus 83 id~lv~nAg 91 (246)
T 3osu_A 83 LDVLVNNAG 91 (246)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 555555443
No 298
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=26.08 E-value=1.8e+02 Score=25.61 Aligned_cols=46 Identities=9% Similarity=0.120 Sum_probs=30.8
Q ss_pred HHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCC
Q 015729 72 AWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDW 117 (401)
Q Consensus 72 a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 117 (401)
|+..+-..-+++|++|++.-.+..+....++++..|++++.+..++
T Consensus 165 a~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~ 210 (348)
T 3two_A 165 TYSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNE 210 (348)
T ss_dssp HHHHHHHTTCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred HHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3443334457899999998655445556678888999877665443
No 299
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=26.00 E-value=2.8e+02 Score=23.28 Aligned_cols=82 Identities=9% Similarity=-0.019 Sum_probs=42.9
Q ss_pred EEecCChhHHHHH-HHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccC--CCC
Q 015729 63 FLIPTTGTGAWES-ALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT--AHT 137 (401)
Q Consensus 63 i~~~~g~t~a~~~-~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~--~~~ 137 (401)
+++|+ ++.++=. +...+++.|-+|++......... .....+..+.++..+.+|-. |.+.+++.+++-. -.+
T Consensus 31 vlVTG-as~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~---d~~~v~~~~~~~~~~~g~ 106 (269)
T 4dmm_A 31 ALVTG-ASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVS---QESEVEALFAAVIERWGR 106 (269)
T ss_dssp EEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT---SHHHHHHHHHHHHHHHSC
T ss_pred EEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCC---CHHHHHHHHHHHHHHcCC
Confidence 45554 4555543 33557778888877654222211 22233445667777777643 6666666654310 014
Q ss_pred ceEEEEEecCC
Q 015729 138 IKAICIVHNET 148 (401)
Q Consensus 138 ~~~i~~~~~~n 148 (401)
+.+++-+....
T Consensus 107 id~lv~nAg~~ 117 (269)
T 4dmm_A 107 LDVLVNNAGIT 117 (269)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 55555554433
No 300
>1ux8_A YJBI protein; oxygen storage/transport, truncated hemoglobin, oxygen transport; HET: HEM; 2.15A {Bacillus subtilis} SCOP: a.1.1.1
Probab=25.70 E-value=59 Score=24.32 Aligned_cols=39 Identities=8% Similarity=0.019 Sum_probs=31.5
Q ss_pred cCCHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHH
Q 015729 353 HLNELQLLGCLAGVEMILKDVGYPVKLGSGVAAASAYLQ 391 (401)
Q Consensus 353 ~~~~~di~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 391 (401)
.+++++.+..++.+.+++++++++......+.+....+.
T Consensus 80 ~I~~~~fd~wl~~~~~al~e~~~~~~~~~~~~~~~~~~a 118 (132)
T 1ux8_A 80 PITNERADAWLSCMKDAMDHVGLEGEIREFLFGRLELTA 118 (132)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 379999999999999999999988777776665555553
No 301
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=25.46 E-value=2.4e+02 Score=23.04 Aligned_cols=79 Identities=11% Similarity=0.010 Sum_probs=41.8
Q ss_pred EEecCChhHHHHHHH-hccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhc---cCCCCc
Q 015729 63 FLIPTTGTGAWESAL-TNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAA---DTAHTI 138 (401)
Q Consensus 63 i~~~~g~t~a~~~~~-~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~---~~~~~~ 138 (401)
+++|+ ++.++=..+ ..+.+.|.+|++..... .......+..+.++..+.+|-. |.+.+++.+++ .. .++
T Consensus 6 vlVTG-as~GIG~a~a~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~---~~~~v~~~~~~~~~~~-g~i 78 (235)
T 3l6e_A 6 IIVTG-AGSGLGRALTIGLVERGHQVSMMGRRY--QRLQQQELLLGNAVIGIVADLA---HHEDVDVAFAAAVEWG-GLP 78 (235)
T ss_dssp EEEES-TTSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHGGGEEEEECCTT---SHHHHHHHHHHHHHHH-CSC
T ss_pred EEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCH--HHHHHHHHHhcCCceEEECCCC---CHHHHHHHHHHHHHhc-CCC
Confidence 44554 455554433 55677888888876532 2222333333445677776643 56666665543 11 245
Q ss_pred eEEEEEecCC
Q 015729 139 KAICIVHNET 148 (401)
Q Consensus 139 ~~i~~~~~~n 148 (401)
.+++-+....
T Consensus 79 d~lvnnAg~~ 88 (235)
T 3l6e_A 79 ELVLHCAGTG 88 (235)
T ss_dssp SEEEEECCCC
T ss_pred cEEEECCCCC
Confidence 6666554443
No 302
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=25.38 E-value=2.4e+02 Score=23.41 Aligned_cols=63 Identities=13% Similarity=0.060 Sum_probs=36.9
Q ss_pred EEecCChhHHHHH-HHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHh
Q 015729 63 FLIPTTGTGAWES-ALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLA 131 (401)
Q Consensus 63 i~~~~g~t~a~~~-~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~ 131 (401)
+++|++ +.++-. +...+.+.|-+|++..... .......+..+.++..+.+|-. |.+.+++.++
T Consensus 11 ~lVTGa-s~gIG~a~a~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dv~---~~~~v~~~~~ 74 (255)
T 4eso_A 11 AIVIGG-THGMGLATVRRLVEGGAEVLLTGRNE--SNIARIREEFGPRVHALRSDIA---DLNEIAVLGA 74 (255)
T ss_dssp EEEETC-SSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHGGGEEEEECCTT---CHHHHHHHHH
T ss_pred EEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHhCCcceEEEccCC---CHHHHHHHHH
Confidence 555554 444443 3355777888888876532 2223444445667777777643 6666665554
No 303
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=25.37 E-value=2.6e+02 Score=23.94 Aligned_cols=85 Identities=15% Similarity=0.126 Sum_probs=44.3
Q ss_pred EEecCChhHHHHHH-HhccCCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccC--CCCc
Q 015729 63 FLIPTTGTGAWESA-LTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT--AHTI 138 (401)
Q Consensus 63 i~~~~g~t~a~~~~-~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~--~~~~ 138 (401)
+++|+ ++.++-.. ...+++.|-+|++......... .....+..+.++..+.+|-. |.+.+++.+++-. ..++
T Consensus 34 vlVTG-as~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~---d~~~v~~~~~~~~~~~g~i 109 (301)
T 3tjr_A 34 AVVTG-GASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVR---HLDEMVRLADEAFRLLGGV 109 (301)
T ss_dssp EEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT---CHHHHHHHHHHHHHHHSSC
T ss_pred EEEeC-CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCC---CHHHHHHHHHHHHHhCCCC
Confidence 55554 45555443 3556778888888765322211 12223334667777777643 6666666654310 0145
Q ss_pred eEEEEEecCCCcc
Q 015729 139 KAICIVHNETATG 151 (401)
Q Consensus 139 ~~i~~~~~~n~tG 151 (401)
.+++-+......+
T Consensus 110 d~lvnnAg~~~~~ 122 (301)
T 3tjr_A 110 DVVFSNAGIVVAG 122 (301)
T ss_dssp SEEEECCCCCCCB
T ss_pred CEEEECCCcCCCC
Confidence 6665554433333
No 304
>2jrx_A UPF0352 protein YEJL; homodimer, alpha helix, structural genomics, PSI-2, protein initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: a.284.1.1
Probab=25.33 E-value=77 Score=21.43 Aligned_cols=43 Identities=19% Similarity=0.184 Sum_probs=33.5
Q ss_pred cCCHHHHHHHHHHHHHHHHhcCCCCCcch-HHHHHHHHH-HccCC
Q 015729 353 HLNELQLLGCLAGVEMILKDVGYPVKLGS-GVAAASAYL-QNNIP 395 (401)
Q Consensus 353 ~~~~~di~~~~~~i~~~l~~~~~~~~~~~-~~~~~~~~~-~~~~~ 395 (401)
-.+.+++|+++..+-.+|++...+.++.- .++|.--.+ ..++|
T Consensus 6 KYsd~qvE~ll~eli~VLEKH~Ap~DLSLMvLGNmvTNlln~~V~ 50 (83)
T 2jrx_A 6 RYSDEQVEQLLAELLNVLEKHKAPTDLSLMVLGNMVTNLINTSIA 50 (83)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHSC
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHhhcCC
Confidence 34789999999999999999999988887 466655555 44554
No 305
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=24.95 E-value=2.5e+02 Score=23.48 Aligned_cols=99 Identities=6% Similarity=0.034 Sum_probs=49.2
Q ss_pred EEecCChhHHHHHH-HhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccC--CCC
Q 015729 63 FLIPTTGTGAWESA-LTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT--AHT 137 (401)
Q Consensus 63 i~~~~g~t~a~~~~-~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~--~~~ 137 (401)
.++..|++.++=.+ ...+++.|-+|++......... .....+..+.++..+.+|-. |.+.+++.+++-. -.+
T Consensus 20 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~---~~~~v~~~~~~~~~~~g~ 96 (270)
T 3is3_A 20 VALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIR---QVPEIVKLFDQAVAHFGH 96 (270)
T ss_dssp EEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT---SHHHHHHHHHHHHHHHSC
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCC---CHHHHHHHHHHHHHHcCC
Confidence 34444455555443 3557778888887543212111 22333445777888877654 6666666654310 014
Q ss_pred ceEEEEEecCCCccccc--chHHHHHHhh
Q 015729 138 IKAICIVHNETATGVTN--NLSKVRKLLD 164 (401)
Q Consensus 138 ~~~i~~~~~~n~tG~~~--~l~~i~~l~~ 164 (401)
+.+++-+......+... +.+++.+..+
T Consensus 97 id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 125 (270)
T 3is3_A 97 LDIAVSNSGVVSFGHLKDVTEEEFDRVFS 125 (270)
T ss_dssp CCEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 55555443333333332 3444444333
No 306
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=24.88 E-value=2.1e+02 Score=24.23 Aligned_cols=79 Identities=6% Similarity=-0.013 Sum_probs=43.2
Q ss_pred EEecCChhHHHHHH-HhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhc---cCCCCc
Q 015729 63 FLIPTTGTGAWESA-LTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAA---DTAHTI 138 (401)
Q Consensus 63 i~~~~g~t~a~~~~-~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~---~~~~~~ 138 (401)
+++| |++.++-.. ...+++.|-+|++.+... .......+..+.++..+.+|-. |.+.+++.+++ .- .++
T Consensus 32 vlVT-Gas~gIG~aia~~la~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dv~---d~~~v~~~~~~~~~~~-g~i 104 (277)
T 3gvc_A 32 AIVT-GAGAGIGLAVARRLADEGCHVLCADIDG--DAADAAATKIGCGAAACRVDVS---DEQQIIAMVDACVAAF-GGV 104 (277)
T ss_dssp EEET-TTTSTHHHHHHHHHHHTTCEEEEEESSH--HHHHHHHHHHCSSCEEEECCTT---CHHHHHHHHHHHHHHH-SSC
T ss_pred EEEE-CCCcHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHcCCcceEEEecCC---CHHHHHHHHHHHHHHc-CCC
Confidence 4444 455554433 355677888888876532 2223444445667777776643 66666665543 11 245
Q ss_pred eEEEEEecCC
Q 015729 139 KAICIVHNET 148 (401)
Q Consensus 139 ~~i~~~~~~n 148 (401)
.+++-+....
T Consensus 105 D~lvnnAg~~ 114 (277)
T 3gvc_A 105 DKLVANAGVV 114 (277)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 6665554433
No 307
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=24.74 E-value=1.5e+02 Score=28.27 Aligned_cols=75 Identities=12% Similarity=0.007 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc-cCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCC
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN-TLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESD 116 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~-~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 116 (401)
-.+...++.+.|++++|.+.+. .+ ..--......+... ..-.|.+|.+.........+...+...|++++.+-+.
T Consensus 321 G~~~T~~~l~~la~~~g~~~~~-~i-~~er~r~~~~l~d~~~~l~GKrvaI~gd~~~~~~la~fL~elGm~vv~v~~~ 396 (523)
T 3u7q_B 321 GLDWTDEFLMKVSEISGQPIPA-SL-TKERGRLVDMMTDSHTWLHGKRFALWGDPDFVMGLVKFLLELGCEPVHILCH 396 (523)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCH-HH-HHHHHHHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CHHHHHHHHHHHHHHHCCChhH-HH-HHHHHHHHHHHHHHHHhcCCCEEEEECCchHHHHHHHHHHHcCCEEEEEEeC
Confidence 3455667778888888876432 11 00000111111111 1124677777643223333445566788888777654
No 308
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=24.72 E-value=1.3e+02 Score=24.34 Aligned_cols=48 Identities=13% Similarity=0.143 Sum_probs=30.0
Q ss_pred CeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCC
Q 015729 85 DRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNET 148 (401)
Q Consensus 85 d~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n 148 (401)
++|++++.+--... .....+..|++++.+. +++++++ ...++++.+.+
T Consensus 3 ~~I~iiD~g~~n~~si~~al~~~G~~~~v~~-------~~~~l~~---------~D~lilPG~g~ 51 (211)
T 4gud_A 3 QNVVIIDTGCANISSVKFAIERLGYAVTISR-------DPQVVLA---------ADKLFLPGVGT 51 (211)
T ss_dssp CCEEEECCCCTTHHHHHHHHHHTTCCEEEEC-------CHHHHHH---------CSEEEECCCSC
T ss_pred CEEEEEECCCChHHHHHHHHHHCCCEEEEEC-------CHHHHhC---------CCEEEECCCCC
Confidence 46888887643222 4566788999988764 5666543 24667765443
No 309
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=24.52 E-value=3e+02 Score=22.77 Aligned_cols=79 Identities=11% Similarity=0.005 Sum_probs=43.6
Q ss_pred EEecCChhHHHHH-HHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhc---cCCCCc
Q 015729 63 FLIPTTGTGAWES-ALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAA---DTAHTI 138 (401)
Q Consensus 63 i~~~~g~t~a~~~-~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~---~~~~~~ 138 (401)
+++|++ +.++=. +...+++.|.+|++.+... ..........+.++..+.+|-. |.+.+++.+++ .- .++
T Consensus 11 vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~---~~~~v~~~~~~~~~~~-g~i 83 (259)
T 4e6p_A 11 ALITGS-ARGIGRAFAEAYVREGATVAIADIDI--ERARQAAAEIGPAAYAVQMDVT---RQDSIDAAIAATVEHA-GGL 83 (259)
T ss_dssp EEEETC-SSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHCTTEEEEECCTT---CHHHHHHHHHHHHHHS-SSC
T ss_pred EEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHhCCCceEEEeeCC---CHHHHHHHHHHHHHHc-CCC
Confidence 555554 444433 3355777888888876522 2223444445666777776643 66666665543 11 245
Q ss_pred eEEEEEecCC
Q 015729 139 KAICIVHNET 148 (401)
Q Consensus 139 ~~i~~~~~~n 148 (401)
.+++-+....
T Consensus 84 d~lv~~Ag~~ 93 (259)
T 4e6p_A 84 DILVNNAALF 93 (259)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCCcC
Confidence 6665554433
No 310
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=24.50 E-value=93 Score=25.63 Aligned_cols=110 Identities=14% Similarity=0.084 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCC-CCCeEE-EEcCCcch-HHHHHHHHHcCCcEEEEeCCCCCC
Q 015729 44 TKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLS-PGDRII-SFLIGQFS-LLWIDQQQRLNFNVDVVESDWGEG 120 (401)
Q Consensus 44 ~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~-~gd~vl-~~~~~~~~-~~~~~~~~~~g~~~~~v~~~~~~~ 120 (401)
+.+|.+.+.+.+|.+....+++.+-|..+-.++-..... .|=+++ +.+.. +. .. .. ....|+.+.
T Consensus 68 V~~L~~~i~~~Lg~~~~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~d-p~~ki-G~-~~i~GvpV~--------- 135 (212)
T 3keo_A 68 VKKLMNFFAEILNDHSTTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLD-SNDLV-GK-TTEDGIPVY--------- 135 (212)
T ss_dssp HHHHHHHHHHHTTTTSCEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECT-TSTTT-TC-BCTTCCBEE---------
T ss_pred HHHHHHHHHHHhCCCCCCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCC-chhcc-Cc-eeECCeEEe---------
Confidence 557888888899988766687777777665533211122 222332 23321 11 10 00 011233221
Q ss_pred CChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecc
Q 015729 121 AKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGV 177 (401)
Q Consensus 121 ~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a 177 (401)
..+++++.+++ .++..++++.|.. ..+++++.|.+ .|+.-|..=+
T Consensus 136 -~~~dL~~~v~~---~~Id~vIIAvPs~------~aq~v~d~lv~--~GIk~I~nFa 180 (212)
T 3keo_A 136 -GISTINDHLID---SDIETAILTVPST------EAQEVADILVK--AGIKGILSFS 180 (212)
T ss_dssp -EGGGHHHHC-C---CSCCEEEECSCGG------GHHHHHHHHHH--HTCCEEEECS
T ss_pred -CHHHHHHHHHH---cCCCEEEEecCch------hHHHHHHHHHH--cCCCEEEEcC
Confidence 24677777775 3567888886542 35678888888 7776666533
No 311
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=24.34 E-value=1.9e+02 Score=24.67 Aligned_cols=65 Identities=11% Similarity=0.022 Sum_probs=37.4
Q ss_pred EEecCChhHHHHHH-HhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHh
Q 015729 63 FLIPTTGTGAWESA-LTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLA 131 (401)
Q Consensus 63 i~~~~g~t~a~~~~-~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~ 131 (401)
+++|+ ++.++=.. ...+++.|.+|++......... .....+..+.++..+.+|-. |.+.+++.++
T Consensus 50 vlVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~---d~~~v~~~~~ 117 (291)
T 3ijr_A 50 VLITG-GDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLS---DEQHCKDIVQ 117 (291)
T ss_dssp EEEET-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTT---SHHHHHHHHH
T ss_pred EEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCC---CHHHHHHHHH
Confidence 55555 45555433 3557778888887765322111 22334556778888877654 6666666554
No 312
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=24.28 E-value=2.4e+02 Score=23.72 Aligned_cols=81 Identities=9% Similarity=0.034 Sum_probs=42.3
Q ss_pred EEecCChhHHHHH-HHhccCCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhcc--CCCCc
Q 015729 63 FLIPTTGTGAWES-ALTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAAD--TAHTI 138 (401)
Q Consensus 63 i~~~~g~t~a~~~-~~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~--~~~~~ 138 (401)
+++|+ ++.++-. +...+++.|.+|++......... .....+..|.++..+.+|-. |.+.+++.+++- ...++
T Consensus 29 ~lVTG-as~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~---d~~~v~~~~~~~~~~~g~i 104 (271)
T 4ibo_A 29 ALVTG-SSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVT---SESEIIEAFARLDEQGIDV 104 (271)
T ss_dssp EEETT-CSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTT---CHHHHHHHHHHHHHHTCCC
T ss_pred EEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCC---CHHHHHHHHHHHHHHCCCC
Confidence 45554 5555543 33557778888888765222111 12223334667777766643 677666665531 00245
Q ss_pred eEEEEEecC
Q 015729 139 KAICIVHNE 147 (401)
Q Consensus 139 ~~i~~~~~~ 147 (401)
.+++-+...
T Consensus 105 D~lv~nAg~ 113 (271)
T 4ibo_A 105 DILVNNAGI 113 (271)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 565555443
No 313
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=24.18 E-value=1.9e+02 Score=25.67 Aligned_cols=38 Identities=13% Similarity=0.151 Sum_probs=26.9
Q ss_pred ccCCCCCeEEEEcCCcchHHHHHHHHHcCCc-EEEEeCC
Q 015729 79 NTLSPGDRIISFLIGQFSLLWIDQQQRLNFN-VDVVESD 116 (401)
Q Consensus 79 ~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~-~~~v~~~ 116 (401)
+-+++|++|++.-.+-.+....++++..|++ ++.+..+
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~ 213 (363)
T 3m6i_A 175 AGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDID 213 (363)
T ss_dssp HTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 3478999999986555555566788889997 6666543
No 314
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=24.11 E-value=2.5e+02 Score=23.53 Aligned_cols=70 Identities=11% Similarity=0.108 Sum_probs=39.2
Q ss_pred EEecCChhHHHHHHH-hccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEE
Q 015729 63 FLIPTTGTGAWESAL-TNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAI 141 (401)
Q Consensus 63 i~~~~g~t~a~~~~~-~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i 141 (401)
+++|+ ++.+|=.++ ..+.+.|-+|++.+...- .+....+.++..+.+|-. |.+++++.+++.. ++.++
T Consensus 14 alVTG-as~GIG~aia~~la~~Ga~Vv~~~~~~~-----~~~~~~~~~~~~~~~Dv~---~~~~v~~~~~~~g--~iDiL 82 (242)
T 4b79_A 14 VLVTG-GSSGIGAAIAMQFAELGAEVVALGLDAD-----GVHAPRHPRIRREELDIT---DSQRLQRLFEALP--RLDVL 82 (242)
T ss_dssp EEEET-TTSHHHHHHHHHHHHTTCEEEEEESSTT-----STTSCCCTTEEEEECCTT---CHHHHHHHHHHCS--CCSEE
T ss_pred EEEeC-CCCHHHHHHHHHHHHCCCEEEEEeCCHH-----HHhhhhcCCeEEEEecCC---CHHHHHHHHHhcC--CCCEE
Confidence 44454 455554443 557778888888765211 111223446666666532 6788888887643 45544
Q ss_pred EE
Q 015729 142 CI 143 (401)
Q Consensus 142 ~~ 143 (401)
+-
T Consensus 83 VN 84 (242)
T 4b79_A 83 VN 84 (242)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 315
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=23.46 E-value=2.1e+02 Score=23.65 Aligned_cols=76 Identities=9% Similarity=-0.010 Sum_probs=41.8
Q ss_pred EEecCChhHHHHH-HHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhc---cCCCCc
Q 015729 63 FLIPTTGTGAWES-ALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAA---DTAHTI 138 (401)
Q Consensus 63 i~~~~g~t~a~~~-~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~---~~~~~~ 138 (401)
+++|+ ++.++-. +...+++.|.+|++.... ........+..+.++..+.+|-. |.+.+++.+++ .. .++
T Consensus 12 vlITG-as~gIG~~~a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~D~~---~~~~~~~~~~~~~~~~-g~i 84 (261)
T 3n74_A 12 ALITG-AGSGFGEGMAKRFAKGGAKVVIVDRD--KAGAERVAGEIGDAALAVAADIS---KEADVDAAVEAALSKF-GKV 84 (261)
T ss_dssp EEEET-TTSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHCTTEEEEECCTT---SHHHHHHHHHHHHHHH-SCC
T ss_pred EEEEC-CCchHHHHHHHHHHHCCCEEEEEcCC--HHHHHHHHHHhCCceEEEEecCC---CHHHHHHHHHHHHHhc-CCC
Confidence 45554 4444433 335567778888887653 22233445555667777777643 56666655542 11 145
Q ss_pred eEEEEEe
Q 015729 139 KAICIVH 145 (401)
Q Consensus 139 ~~i~~~~ 145 (401)
..++-+.
T Consensus 85 d~li~~A 91 (261)
T 3n74_A 85 DILVNNA 91 (261)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 5555554
No 316
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=23.27 E-value=3.5e+02 Score=23.06 Aligned_cols=19 Identities=16% Similarity=0.235 Sum_probs=13.0
Q ss_pred hHHHHHHhhhcCCCcEEEEec
Q 015729 156 LSKVRKLLDEYRHPALFLVDG 176 (401)
Q Consensus 156 l~~i~~l~~~~~~~~~li~D~ 176 (401)
+.++.+.+++ +++.+++|.
T Consensus 149 ~~~~~~~a~~--~~~~v~~D~ 167 (309)
T 3umo_A 149 LTQLISAAQK--QGIRCIVDS 167 (309)
T ss_dssp HHHHHHHHHH--TTCEEEEEC
T ss_pred HHHHHHHHHh--cCCEEEEEC
Confidence 4556666666 777777775
No 317
>2qrw_A Hemoglobin-like protein HBO; truncated hemoglobin fold, alpha helix, heme, hydroxylation, iron, membrane, metal-binding; HET: HEM; 1.93A {Mycobacterium tuberculosis} PDB: 1ngk_A*
Probab=23.06 E-value=66 Score=23.81 Aligned_cols=44 Identities=2% Similarity=-0.071 Sum_probs=33.6
Q ss_pred cCCHHHHHHHHHHHHHHH---HhcCCCCCcchHHHHHHHHHHccCCC
Q 015729 353 HLNELQLLGCLAGVEMIL---KDVGYPVKLGSGVAAASAYLQNNIPM 396 (401)
Q Consensus 353 ~~~~~di~~~~~~i~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (401)
.+++++.+..++.+.+++ ++++++.+....+.+....+...+=.
T Consensus 79 ~I~~~~f~~wl~~~~~al~~~~e~~~~~~~~~~~~~~~~~~a~~mvn 125 (128)
T 2qrw_A 79 RISLIERDAFLRCMHTAVASIDSETLDDEHRRELLDYLEMAAHSLVN 125 (128)
T ss_dssp CCCHHHHHHHHHHHHHHHHTSCTTTSCHHHHHHHHHHHHHHHHHTCC
T ss_pred CcCHHHHHHHHHHHHHHHhHHHHcCCCHHHHHHHHHHHHHHHHHHhc
Confidence 379999999999999999 88888766666666666666554433
No 318
>2xyk_A 2-ON-2 hemoglobin; oxygen storage-transport complex; HET: HEM; 2.10A {Agrobacterium tumefaciens}
Probab=22.90 E-value=63 Score=24.27 Aligned_cols=39 Identities=13% Similarity=-0.032 Sum_probs=31.0
Q ss_pred cCCHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHH
Q 015729 353 HLNELQLLGCLAGVEMILKDVGYPVKLGSGVAAASAYLQ 391 (401)
Q Consensus 353 ~~~~~di~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 391 (401)
.+++++.+..+.-+.+++++++++......+.+....+.
T Consensus 84 ~I~~~~fd~Wl~~~~~al~e~~~~~~~~~~l~~~~~~~a 122 (133)
T 2xyk_A 84 PIGPAERDEWLLCFRRAMDETIENAKLREIIWAPVERLA 122 (133)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 379999999999999999999987766666555555443
No 319
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=22.71 E-value=2.7e+02 Score=23.40 Aligned_cols=81 Identities=6% Similarity=-0.040 Sum_probs=41.6
Q ss_pred EEecCChhHHHHHHH-hccCCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccC--CCCc
Q 015729 63 FLIPTTGTGAWESAL-TNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT--AHTI 138 (401)
Q Consensus 63 i~~~~g~t~a~~~~~-~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~--~~~~ 138 (401)
+++..|++.++=..+ ..++..|-+|++......... .....+..+.++..+.+|-. |.+.+++.+++-. -.++
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~---d~~~v~~~~~~~~~~~g~i 106 (270)
T 3ftp_A 30 VAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVN---DATAVDALVESTLKEFGAL 106 (270)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTT---CHHHHHHHHHHHHHHHSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCC---CHHHHHHHHHHHHHHcCCC
Confidence 344444555554433 556778888888765322211 22233344666677766543 6666666554310 0145
Q ss_pred eEEEEEec
Q 015729 139 KAICIVHN 146 (401)
Q Consensus 139 ~~i~~~~~ 146 (401)
.+++-+..
T Consensus 107 D~lvnnAg 114 (270)
T 3ftp_A 107 NVLVNNAG 114 (270)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 55555443
No 320
>2kfp_A Pspto_3016 protein; alpha, beta, double-WING, structural genomics, PSI-2, protein structure initiative; NMR {Pseudomonas syringae} PDB: 3h9x_A
Probab=22.58 E-value=1.7e+02 Score=21.66 Aligned_cols=40 Identities=8% Similarity=-0.006 Sum_probs=26.7
Q ss_pred HHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHH
Q 015729 323 VRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLA 364 (401)
Q Consensus 323 ~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~ 364 (401)
+..|.+..+| .|++.-....|+.|...+.+++++|..+++
T Consensus 71 ~~~Lr~~~~i--~PayhmnK~hWisv~Ld~~v~d~~i~~lI~ 110 (125)
T 2kfp_A 71 VGSLRKKPGI--YPAYHMNKEHWITVLLNGPLGAKEIHSLIE 110 (125)
T ss_dssp HHHHHHSTTE--EECSSSCSSSEEEEETTTTCCHHHHHHHHH
T ss_pred HHHHHhCCCC--CccccCCCCCeEEEEcCCCCCHHHHHHHHH
Confidence 3445555674 477654456889997766778887777665
No 321
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=22.57 E-value=1.5e+02 Score=21.48 Aligned_cols=50 Identities=8% Similarity=-0.009 Sum_probs=28.4
Q ss_pred CCCeEEEEcCCcchHHH---HHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhc
Q 015729 83 PGDRIISFLIGQFSLLW---IDQQQRLNFNVDVVESDWGEGAKLDVLASKLAA 132 (401)
Q Consensus 83 ~gd~vl~~~~~~~~~~~---~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~ 132 (401)
.|..+.+...|...... ....+..|.++..+....-.++|.+.+.+.+++
T Consensus 12 ~g~dv~iv~~Gs~~~~a~eA~~~L~~~Gi~v~vi~~r~~~P~d~~~l~~~~~~ 64 (118)
T 3ju3_A 12 KEADITFVTWGSQKGPILDVIEDLKEEGISANLLYLKMFSPFPTEFVKNVLSS 64 (118)
T ss_dssp SSCSEEEEEEGGGHHHHHHHHHHHHHTTCCEEEEEECSSCSCCHHHHHHHHTT
T ss_pred CCCCEEEEEECccHHHHHHHHHHHHHCCCceEEEEECeEecCCHHHHHHHHcC
Confidence 34445555444333332 223344577777777666667777777777753
No 322
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=22.54 E-value=2.8e+02 Score=23.23 Aligned_cols=80 Identities=8% Similarity=0.012 Sum_probs=41.9
Q ss_pred EEecCChhHHHHHH-HhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccC--CCC
Q 015729 63 FLIPTTGTGAWESA-LTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT--AHT 137 (401)
Q Consensus 63 i~~~~g~t~a~~~~-~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~--~~~ 137 (401)
+++|++ +.++=.+ ...+++.|.+|++......... .....+..+.++..+.+|-. |.+.+++.+++-. -.+
T Consensus 30 ~lVTGa-s~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---~~~~v~~~~~~~~~~~g~ 105 (267)
T 3u5t_A 30 AIVTGA-SRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVS---DPAAVRRLFATAEEAFGG 105 (267)
T ss_dssp EEEESC-SSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTT---CHHHHHHHHHHHHHHHSC
T ss_pred EEEeCC-CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCC---CHHHHHHHHHHHHHHcCC
Confidence 555554 4455433 3556778888887633222111 22333445667777777654 6776666654310 014
Q ss_pred ceEEEEEec
Q 015729 138 IKAICIVHN 146 (401)
Q Consensus 138 ~~~i~~~~~ 146 (401)
+.+++-+..
T Consensus 106 iD~lvnnAG 114 (267)
T 3u5t_A 106 VDVLVNNAG 114 (267)
T ss_dssp EEEEEECCC
T ss_pred CCEEEECCC
Confidence 555554443
No 323
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=22.45 E-value=2.5e+02 Score=23.28 Aligned_cols=81 Identities=14% Similarity=0.040 Sum_probs=41.1
Q ss_pred EEecCChhHHHHHHH-hccCCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccC--CCCc
Q 015729 63 FLIPTTGTGAWESAL-TNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT--AHTI 138 (401)
Q Consensus 63 i~~~~g~t~a~~~~~-~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~--~~~~ 138 (401)
.++..|++.++=.++ ..+++.|.+|++......... .....+..+.++..+.+|-. |.+.+++.+++-. -.++
T Consensus 8 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~---~~~~v~~~~~~~~~~~g~i 84 (257)
T 3imf_A 8 VVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVR---NTDDIQKMIEQIDEKFGRI 84 (257)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTT---CHHHHHHHHHHHHHHHSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCC---CHHHHHHHHHHHHHHcCCC
Confidence 344445555554433 556778888888765222111 11222233556777776643 6666666554310 0145
Q ss_pred eEEEEEec
Q 015729 139 KAICIVHN 146 (401)
Q Consensus 139 ~~i~~~~~ 146 (401)
.+++-+..
T Consensus 85 d~lv~nAg 92 (257)
T 3imf_A 85 DILINNAA 92 (257)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 55555443
No 324
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=22.42 E-value=1.8e+02 Score=24.04 Aligned_cols=46 Identities=15% Similarity=0.015 Sum_probs=27.9
Q ss_pred eEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCc
Q 015729 62 PFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFN 109 (401)
Q Consensus 62 ~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~ 109 (401)
.+++.+||..|...+ ..++..|-+|.+.++... .....++...+++
T Consensus 33 ~VLVVGgG~va~~ka-~~Ll~~GA~VtVvap~~~-~~l~~l~~~~~i~ 78 (223)
T 3dfz_A 33 SVLVVGGGTIATRRI-KGFLQEGAAITVVAPTVS-AEINEWEAKGQLR 78 (223)
T ss_dssp CEEEECCSHHHHHHH-HHHGGGCCCEEEECSSCC-HHHHHHHHTTSCE
T ss_pred EEEEECCCHHHHHHH-HHHHHCCCEEEEECCCCC-HHHHHHHHcCCcE
Confidence 377788887776654 456667778888877533 2233444443443
No 325
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=22.34 E-value=49 Score=30.93 Aligned_cols=30 Identities=17% Similarity=0.155 Sum_probs=26.8
Q ss_pred cCCCcccccchHHHHHHhhhcCCCcEEEEecc
Q 015729 146 NETATGVTNNLSKVRKLLDEYRHPALFLVDGV 177 (401)
Q Consensus 146 ~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a 177 (401)
+.+..|...+++++++-||+ +|+.||+|.+
T Consensus 69 i~~~~Gt~~df~~lv~~aH~--~Gi~VilD~V 98 (496)
T 4gqr_A 69 LCTRSGNEDEFRNMVTRCNN--VGVRIYVDAV 98 (496)
T ss_dssp SCBTTBCHHHHHHHHHHHHH--TTCEEEEEEC
T ss_pred eCCCCCCHHHHHHHHHHHHH--CCCEEEEEEc
Confidence 45678999999999999999 9999999976
No 326
>1dly_A Hemoglobin; oxygen storage/transport complex; HET: HEM; 1.80A {Chlamydomonas eugametos} SCOP: a.1.1.1 PDB: 1uvx_A*
Probab=22.32 E-value=57 Score=25.67 Aligned_cols=45 Identities=16% Similarity=0.243 Sum_probs=34.1
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHccCCCCC
Q 015729 354 LNELQLLGCLAGVEMILKDVGYPVKLGSGVAAASAYLQNNIPMIP 398 (401)
Q Consensus 354 ~~~~di~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (401)
+++++.+..++.+.+.+++++++.+....+.+..+.+..++=..|
T Consensus 118 I~~~~fd~Wl~~~~~aL~e~~~~~~~~~~l~~~l~~~a~~mvn~~ 162 (164)
T 1dly_A 118 LSDVHFQAVARHLSDTLTELGVPPEDITDAMAVVASTRTEVLNMP 162 (164)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 799999999999999999998876666666666655554443333
No 327
>3aq9_A Group 1 truncated hemoglobin; 2/2 fold hemoglobin, nitric oxide detoxification, oxygen BIN; HET: HEM; 1.74A {Tetrahymena pyriformis} PDB: 3aq5_A* 3aq6_A* 3aq8_A* 3aq7_A*
Probab=22.10 E-value=42 Score=24.62 Aligned_cols=38 Identities=16% Similarity=0.190 Sum_probs=29.4
Q ss_pred cCCHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHH
Q 015729 353 HLNELQLLGCLAGVEMILKDVGYPVKLGSGVAAASAYL 390 (401)
Q Consensus 353 ~~~~~di~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~ 390 (401)
.+++++.+..++.+.+++++++++.+....+.++...+
T Consensus 77 ~I~~~~f~~wl~~~~~al~~~~~~~~~~~~~~~~~~~~ 114 (121)
T 3aq9_A 77 NLQNLHFDAIIENLAATLKELGVTDAVINEAAKVIEHT 114 (121)
T ss_dssp CBCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTT
T ss_pred CcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 47999999999999999999987666555555554443
No 328
>3cmq_A Phenylalanyl-tRNA synthetase, mitochondrial; classii aarss fold, RRM domain, RNA recogntion, aminoacyl-tRNA synthetase, ATP-binding, ligase; HET: FA5; 2.20A {Homo sapiens} PDB: 3hfv_A* 3teg_A* 3tup_A
Probab=21.85 E-value=3.3e+02 Score=24.97 Aligned_cols=66 Identities=11% Similarity=0.033 Sum_probs=43.7
Q ss_pred EEEEcCCC-CCHHHHHHHHHhhCC-----eE---EccCCCCCCCc---EEEEeecc---cCCHHHHHHHHHHHHHHHH-h
Q 015729 309 TAVIVPSH-INSSEIVRRAWQRYN-----LS---LGLGLNKVAGK---VFRIGHLG---HLNELQLLGCLAGVEMILK-D 372 (401)
Q Consensus 309 ~~~~~~~~-~~~~~l~~~L~~~~~-----i~---v~~g~~~~~~~---~~Ri~~~~---~~~~~di~~~~~~i~~~l~-~ 372 (401)
++|.+|+. ++..++.+.+++..| |. +..|- ..|. .+|+.+.. ++|++|++.+.+.|.+.+. +
T Consensus 331 la~~v~~~~v~~~~i~~~ir~~~~~lle~v~lfDvy~g~--~~gkkSla~rl~~r~~~rTLtd~ev~~~~~~i~~~l~~~ 408 (415)
T 3cmq_A 331 ISFWLPSENYAENDFYDLVRTIGGDLVEKVDLIDKFVHP--KTHKTSHCYRITYRHMERTLSQREVRHIHQALQEAAVQL 408 (415)
T ss_dssp EEEECCTTCCCHHHHHHHHHHHHGGGEEEEEEEEEEECT--TTCCEEEEEEEEECCSSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCccHHHHHHHHHHhCCCceEEEEEEEEEeCC--CCCcEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 56777887 889988888775322 11 11121 1222 37776544 7789999999999988885 5
Q ss_pred cCCC
Q 015729 373 VGYP 376 (401)
Q Consensus 373 ~~~~ 376 (401)
+|..
T Consensus 409 ~ga~ 412 (415)
T 3cmq_A 409 LGVE 412 (415)
T ss_dssp SCCE
T ss_pred hCCE
Confidence 6764
No 329
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=21.75 E-value=3.5e+02 Score=22.51 Aligned_cols=82 Identities=12% Similarity=0.011 Sum_probs=41.8
Q ss_pred EEecCChhHHHHHHH-hccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhc---cCCC
Q 015729 63 FLIPTTGTGAWESAL-TNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAA---DTAH 136 (401)
Q Consensus 63 i~~~~g~t~a~~~~~-~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~---~~~~ 136 (401)
.++..|++.++=..+ ..++..|-+|++......... ...+.+..+.++..+.+|-. |.+.+++.+++ .- .
T Consensus 22 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~---~~~~v~~~~~~~~~~~-g 97 (266)
T 4egf_A 22 RALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLA---EPDAPAELARRAAEAF-G 97 (266)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT---STTHHHHHHHHHHHHH-T
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCC---CHHHHHHHHHHHHHHc-C
Confidence 344445555554433 556778888888765322111 11222225667777777654 44444444332 11 2
Q ss_pred CceEEEEEecCC
Q 015729 137 TIKAICIVHNET 148 (401)
Q Consensus 137 ~~~~i~~~~~~n 148 (401)
++.+++-+....
T Consensus 98 ~id~lv~nAg~~ 109 (266)
T 4egf_A 98 GLDVLVNNAGIS 109 (266)
T ss_dssp SCSEEEEECCCC
T ss_pred CCCEEEECCCcC
Confidence 456666654433
No 330
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=21.68 E-value=2.4e+02 Score=23.16 Aligned_cols=65 Identities=11% Similarity=-0.061 Sum_probs=32.6
Q ss_pred EEecCChhHHHHHH-HhccCCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHh
Q 015729 63 FLIPTTGTGAWESA-LTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLA 131 (401)
Q Consensus 63 i~~~~g~t~a~~~~-~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~ 131 (401)
+++|+ ++.++-.. ...+++.|-+|++......... .....+..+.++..+.+|-. |.+.+++.++
T Consensus 12 vlITG-as~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~---~~~~~~~~~~ 78 (253)
T 3qiv_A 12 GIVTG-SGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVS---DPESAKAMAD 78 (253)
T ss_dssp EEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTT---SHHHHHHHHH
T ss_pred EEEEC-CCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCC---CHHHHHHHHH
Confidence 44444 44444333 3456677777777655222111 11222334556666766543 5666655554
No 331
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=21.65 E-value=3.2e+02 Score=22.04 Aligned_cols=96 Identities=7% Similarity=-0.113 Sum_probs=49.1
Q ss_pred EEecCChhHHHHH-HHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccC--CCC
Q 015729 63 FLIPTTGTGAWES-ALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT--AHT 137 (401)
Q Consensus 63 i~~~~g~t~a~~~-~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~--~~~ 137 (401)
+++|++ +.++-. +...+++.|-+|++......... ...+.+..+.++..+.+|-. |.+.+++.+++-. -.+
T Consensus 5 vlITGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~---~~~~v~~~~~~~~~~~g~ 80 (235)
T 3l77_A 5 AVITGA-SRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVS---KAESVEEFSKKVLERFGD 80 (235)
T ss_dssp EEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT---CHHHHHHHCC-HHHHHSS
T ss_pred EEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccC---CHHHHHHHHHHHHHhcCC
Confidence 455554 444433 33556778888887765322111 12223345778888877643 6777777654310 014
Q ss_pred ceEEEEEecCCCccccc--chHHHHHH
Q 015729 138 IKAICIVHNETATGVTN--NLSKVRKL 162 (401)
Q Consensus 138 ~~~i~~~~~~n~tG~~~--~l~~i~~l 162 (401)
+..++-+......+... +.+.+.+.
T Consensus 81 id~li~~Ag~~~~~~~~~~~~~~~~~~ 107 (235)
T 3l77_A 81 VDVVVANAGLGYFKRLEELSEEEFHEM 107 (235)
T ss_dssp CSEEEECCCCCCCCCTTTSCHHHHHHH
T ss_pred CCEEEECCccccccCcccCCHHHHHHH
Confidence 56666554443333322 34444443
No 332
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=21.55 E-value=3.8e+02 Score=22.82 Aligned_cols=19 Identities=21% Similarity=0.314 Sum_probs=14.0
Q ss_pred hHHHHHHhhhcCCCcEEEEec
Q 015729 156 LSKVRKLLDEYRHPALFLVDG 176 (401)
Q Consensus 156 l~~i~~l~~~~~~~~~li~D~ 176 (401)
+.++.+.+++ +++++++|.
T Consensus 144 ~~~~~~~a~~--~g~~v~~D~ 162 (306)
T 2abq_A 144 YRSMTQIAKE--RGAFVAVDT 162 (306)
T ss_dssp HHHHHHHHHT--TTCEEEEEC
T ss_pred HHHHHHHHHh--cCCEEEEEC
Confidence 4566777777 888888885
No 333
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=21.40 E-value=3.6e+02 Score=22.57 Aligned_cols=80 Identities=5% Similarity=0.046 Sum_probs=42.4
Q ss_pred EEecCChhHHHHHH-HhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccC--CCC
Q 015729 63 FLIPTTGTGAWESA-LTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT--AHT 137 (401)
Q Consensus 63 i~~~~g~t~a~~~~-~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~--~~~ 137 (401)
+++|+ ++.++=.+ ...+++.|-+|++......... .....+..|.++..+.+|-. |.+.+++.+++-. -.+
T Consensus 34 ~lVTG-as~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~---d~~~v~~~~~~~~~~~g~ 109 (271)
T 3v2g_A 34 AFVTG-GSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNR---DAEAIEQAIRETVEALGG 109 (271)
T ss_dssp EEEET-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT---CHHHHHHHHHHHHHHHSC
T ss_pred EEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCC---CHHHHHHHHHHHHHHcCC
Confidence 55555 45555443 3557778888887643211111 22233445777888877643 6777666655310 014
Q ss_pred ceEEEEEec
Q 015729 138 IKAICIVHN 146 (401)
Q Consensus 138 ~~~i~~~~~ 146 (401)
+.+++-+..
T Consensus 110 iD~lvnnAg 118 (271)
T 3v2g_A 110 LDILVNSAG 118 (271)
T ss_dssp CCEEEECCC
T ss_pred CcEEEECCC
Confidence 555555443
No 334
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=21.29 E-value=2.3e+02 Score=20.31 Aligned_cols=100 Identities=9% Similarity=0.008 Sum_probs=48.4
Q ss_pred CCCcccccCCC---cCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChh--HHHHHHHhccC
Q 015729 7 PGKNHLFVPGP---VHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGT--GAWESALTNTL 81 (401)
Q Consensus 7 ~~~~~~~~~~p---~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t--~a~~~~~~~~~ 81 (401)
.+..|+-+.|| ..++.+.++++++...-.. +.. .. .++.+ +.++.+... ++.....+ +....++ ..+
T Consensus 5 ~g~ly~VG~GpGd~~~lT~~a~~~L~~advv~~-~~~--~~--~~~~l-~~~~~~~~~-~~~~~~~~~~~~~~~i~-~~~ 76 (117)
T 3hh1_A 5 KGTLYVVATPLGNLDDMTFRAVNTLRNAGAIAC-EDT--RR--TSILL-KHFGIEGKR-LVSYHSFNEERAVRQVI-ELL 76 (117)
T ss_dssp CCCEEEEEECSSCGGGSCHHHHHHHHHCSEEEE-SCH--HH--HHHHH-HHTTCCSCC-EEECCSTTHHHHHHHHH-HHH
T ss_pred CceEEEEeCCCCCHHHhhHHHHHHHHhCCEEEE-ecC--ch--HHHHH-HHhCCCCCE-EeccCCccHHHHHHHHH-HHH
Confidence 35677776665 4567788888887443221 110 00 01222 233333222 33322222 2233333 233
Q ss_pred CCCCeEEEEc-CCcchHH-----HHHHHHHcCCcEEEEe
Q 015729 82 SPGDRIISFL-IGQFSLL-----WIDQQQRLNFNVDVVE 114 (401)
Q Consensus 82 ~~gd~vl~~~-~~~~~~~-----~~~~~~~~g~~~~~v~ 114 (401)
..|.+|.... .|.++.+ ....++..|+++..+|
T Consensus 77 ~~G~~V~~l~d~GdP~i~~~~~~l~~~~~~~gi~v~viP 115 (117)
T 3hh1_A 77 EEGSDVALVTDAGTPAISDPGYTMASAAHAAGLPVVPVP 115 (117)
T ss_dssp HTTCCEEEEEETTSCGGGSTTHHHHHHHHHTTCCEEEEC
T ss_pred HCCCeEEEEecCCcCeEeccHHHHHHHHHHCCCcEEEeC
Confidence 4566665555 6777654 2234455678777765
No 335
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=21.26 E-value=3.2e+02 Score=23.03 Aligned_cols=79 Identities=15% Similarity=0.102 Sum_probs=40.6
Q ss_pred EEecCChhHHHHHH-HhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhc---cCCC
Q 015729 63 FLIPTTGTGAWESA-LTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAA---DTAH 136 (401)
Q Consensus 63 i~~~~g~t~a~~~~-~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~---~~~~ 136 (401)
+++|+ ++.++=.. ...++..|-+|++......... ........+.++..+.+|-. |.+.+++.+++ .. .
T Consensus 32 ~lVTG-as~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~---d~~~v~~~~~~~~~~~-g 106 (280)
T 4da9_A 32 AIVTG-GRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLA---DLSSHQATVDAVVAEF-G 106 (280)
T ss_dssp EEEET-TTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTT---SGGGHHHHHHHHHHHH-S
T ss_pred EEEec-CCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCC---CHHHHHHHHHHHHHHc-C
Confidence 44454 45555433 3556778888888753112111 12223345667788877654 45555544432 11 2
Q ss_pred CceEEEEEec
Q 015729 137 TIKAICIVHN 146 (401)
Q Consensus 137 ~~~~i~~~~~ 146 (401)
++.+++-+..
T Consensus 107 ~iD~lvnnAg 116 (280)
T 4da9_A 107 RIDCLVNNAG 116 (280)
T ss_dssp CCCEEEEECC
T ss_pred CCCEEEECCC
Confidence 4566655543
No 336
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=21.22 E-value=3.2e+02 Score=23.58 Aligned_cols=75 Identities=8% Similarity=-0.011 Sum_probs=43.3
Q ss_pred CeEEEEcCCcchHHHHHHHHHcCCcEEEEe-CCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHh
Q 015729 85 DRIISFLIGQFSLLWIDQQQRLNFNVDVVE-SDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLL 163 (401)
Q Consensus 85 d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~-~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~ 163 (401)
..+++..+ .|++ +++.+|++...+. +..+..+.+..+.+.++.-..++++.|+.....+ -+.+..++
T Consensus 184 ~~~v~~H~-af~Y----f~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~-------~~~~~~ia 251 (294)
T 3hh8_A 184 KLIVTSEG-CFKY----FSKAYGVPSAYIWEINTEEEGTPDQISSLIEKLKVIKPSALFVESSVD-------RRPMETVS 251 (294)
T ss_dssp CCEEEEES-CCHH----HHHHHTCCEEEEESSCCSCCCCHHHHHHHHHHHHHSCCSCEEEETTSC-------SHHHHHHH
T ss_pred cEEEEECC-hHHH----HHHHcCCceeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCC-------cHHHHHHH
Confidence 44555444 3443 3677899877665 3444456666666655432214677888764332 23456678
Q ss_pred hhcCCCcEEE
Q 015729 164 DEYRHPALFL 173 (401)
Q Consensus 164 ~~~~~~~~li 173 (401)
++ .|+.++
T Consensus 252 ~~--~g~~v~ 259 (294)
T 3hh8_A 252 KD--SGIPIY 259 (294)
T ss_dssp HH--HCCCEE
T ss_pred HH--hCCcEE
Confidence 88 666554
No 337
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=21.18 E-value=19 Score=25.42 Aligned_cols=39 Identities=28% Similarity=0.322 Sum_probs=24.1
Q ss_pred HHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCC
Q 015729 76 ALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGE 119 (401)
Q Consensus 76 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 119 (401)
+...+.++||.|++...+..... +....++..|-+++++
T Consensus 50 AAArl~~~GD~vII~aY~~~~~~-----e~~~~~P~vV~vd~~N 88 (96)
T 1vc3_B 50 AAAHLVKPGDLVILVAYGVFDEE-----EARNLKPTVVLVDERN 88 (96)
T ss_dssp GGGGTCCTTCEEEEEEEEEECHH-----HHTTCCCEEEEECTTC
T ss_pred HHHccCCCCCEEEEEECccCCHH-----HHhcCCCEEEEECCCC
Confidence 34568899999999877655432 2234455555555544
No 338
>2q3l_A Uncharacterized protein; SPOIIAA-like fold, structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE; 2.25A {Shewanella loihica pv-4} SCOP: c.13.2.2
Probab=21.10 E-value=59 Score=24.15 Aligned_cols=33 Identities=12% Similarity=0.054 Sum_probs=27.1
Q ss_pred CcEEEEeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 343 GKVFRIGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 343 ~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
++.+.+-..+.+|.+|++.++..+++.+++.+-
T Consensus 19 ~~vl~v~~~G~lt~~d~~~l~~~l~~~l~~~~~ 51 (126)
T 2q3l_A 19 DFYLAFKAVGKLTHEDYEQMTPLLESALAGIKT 51 (126)
T ss_dssp EEEEEEEEEEEECHHHHHHHHHHHHHHTTTCCS
T ss_pred CCEEEEEEEeeECHHHHHHHHHHHHHHHHhCCC
Confidence 456777778888999999999999998877654
No 339
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=20.63 E-value=3.7e+02 Score=22.63 Aligned_cols=80 Identities=9% Similarity=0.031 Sum_probs=40.7
Q ss_pred EEecCChhHHHHHH-HhccCCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhcc--CCCCc
Q 015729 63 FLIPTTGTGAWESA-LTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAAD--TAHTI 138 (401)
Q Consensus 63 i~~~~g~t~a~~~~-~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~--~~~~~ 138 (401)
+++| |++.++-.. ...+++.|.+|++......... .....+..+.++..+.+|-. |.+.+++.+++- .-.++
T Consensus 47 vlIT-GasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~---d~~~v~~~~~~~~~~~~~i 122 (285)
T 2c07_A 47 ALVT-GAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVS---KKEEISEVINKILTEHKNV 122 (285)
T ss_dssp EEEE-STTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTT---CHHHHHHHHHHHHHHCSCC
T ss_pred EEEE-CCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCC---CHHHHHHHHHHHHHhcCCC
Confidence 4444 455555433 3557788888887653211111 11222233666777776643 677777666431 00245
Q ss_pred eEEEEEec
Q 015729 139 KAICIVHN 146 (401)
Q Consensus 139 ~~i~~~~~ 146 (401)
.+++-+..
T Consensus 123 d~li~~Ag 130 (285)
T 2c07_A 123 DILVNNAG 130 (285)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 55555543
No 340
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=20.47 E-value=3.8e+02 Score=22.42 Aligned_cols=64 Identities=13% Similarity=0.134 Sum_probs=38.2
Q ss_pred EEecCChhHHHHHH-HhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhc
Q 015729 63 FLIPTTGTGAWESA-LTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAA 132 (401)
Q Consensus 63 i~~~~g~t~a~~~~-~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~ 132 (401)
+++|+ ++.++=.. ...+++.|.+|++.+.. ........+..+.++..+.+|-. |.+.+++.++.
T Consensus 33 vlVTG-as~GIG~aia~~l~~~G~~Vi~~~r~--~~~~~~~~~~~~~~~~~~~~Dl~---~~~~v~~~~~~ 97 (281)
T 3ppi_A 33 AIVSG-GAGGLGEATVRRLHADGLGVVIADLA--AEKGKALADELGNRAEFVSTNVT---SEDSVLAAIEA 97 (281)
T ss_dssp EEEET-TTSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHCTTEEEEECCTT---CHHHHHHHHHH
T ss_pred EEEEC-CCChHHHHHHHHHHHCCCEEEEEeCC--hHHHHHHHHHhCCceEEEEcCCC---CHHHHHHHHHH
Confidence 45554 45555433 35567788888887652 22233445555777788877644 67777666653
No 341
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=20.46 E-value=2e+02 Score=23.90 Aligned_cols=65 Identities=15% Similarity=0.162 Sum_probs=35.3
Q ss_pred EEecCChhHHHHH-HHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHh
Q 015729 63 FLIPTTGTGAWES-ALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLA 131 (401)
Q Consensus 63 i~~~~g~t~a~~~-~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~ 131 (401)
+++| |++.++-. +...++..|.+|++......... ........+.++..+.+|-. |.+.+++.++
T Consensus 10 vlVT-Gas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---~~~~v~~~~~ 77 (264)
T 3i4f_A 10 ALIT-AGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVT---KKEDLHKIVE 77 (264)
T ss_dssp EEET-TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTT---SHHHHHHHHH
T ss_pred EEEe-CCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCC---CHHHHHHHHH
Confidence 4444 45555543 33556778888887643222211 22223334557777777644 6666666654
No 342
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=20.43 E-value=3.4e+02 Score=22.30 Aligned_cols=79 Identities=11% Similarity=-0.031 Sum_probs=40.7
Q ss_pred EEecCChhHHHHHH-HhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccC--CCCce
Q 015729 63 FLIPTTGTGAWESA-LTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT--AHTIK 139 (401)
Q Consensus 63 i~~~~g~t~a~~~~-~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~--~~~~~ 139 (401)
+++|+ ++.++=.. ...+++.|-+|++...... ......+..+.+...+.+|-. |.+.+++.+++-. -.++.
T Consensus 12 ~lVTG-as~gIG~a~a~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~Dv~---d~~~v~~~~~~~~~~~g~iD 85 (248)
T 3op4_A 12 ALVTG-ASRGIGKAIAELLAERGAKVIGTATSES--GAQAISDYLGDNGKGMALNVT---NPESIEAVLKAITDEFGGVD 85 (248)
T ss_dssp EEESS-CSSHHHHHHHHHHHHTTCEEEEEESSHH--HHHHHHHHHGGGEEEEECCTT---CHHHHHHHHHHHHHHHCCCS
T ss_pred EEEeC-CCCHHHHHHHHHHHHCCCEEEEEeCCHH--HHHHHHHHhcccceEEEEeCC---CHHHHHHHHHHHHHHcCCCC
Confidence 44554 45454433 3556778888888765322 222334444445566666543 6666666654310 01455
Q ss_pred EEEEEecC
Q 015729 140 AICIVHNE 147 (401)
Q Consensus 140 ~i~~~~~~ 147 (401)
+++-+...
T Consensus 86 ~lv~nAg~ 93 (248)
T 3op4_A 86 ILVNNAGI 93 (248)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 55555433
No 343
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=20.40 E-value=3.2e+02 Score=22.85 Aligned_cols=79 Identities=10% Similarity=0.043 Sum_probs=40.4
Q ss_pred EEecCChhHHHHHH-HhccCCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhc---cCCCC
Q 015729 63 FLIPTTGTGAWESA-LTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAA---DTAHT 137 (401)
Q Consensus 63 i~~~~g~t~a~~~~-~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~---~~~~~ 137 (401)
+++|+ ++.++-.. ...+++.|.+|++.+....... .....+..+.++..+.+|-. |.+.+++.+++ .- .+
T Consensus 34 vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~---~~~~v~~~~~~~~~~~-g~ 108 (272)
T 1yb1_A 34 VLITG-AGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCS---NREDIYSSAKKVKAEI-GD 108 (272)
T ss_dssp EEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT---CHHHHHHHHHHHHHHT-CC
T ss_pred EEEEC-CCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCC---CHHHHHHHHHHHHHHC-CC
Confidence 55554 45454433 3456677888887765321111 11122333556777776643 66666666542 11 24
Q ss_pred ceEEEEEec
Q 015729 138 IKAICIVHN 146 (401)
Q Consensus 138 ~~~i~~~~~ 146 (401)
+.+++-+..
T Consensus 109 iD~li~~Ag 117 (272)
T 1yb1_A 109 VSILVNNAG 117 (272)
T ss_dssp CSEEEECCC
T ss_pred CcEEEECCC
Confidence 556655543
No 344
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=20.39 E-value=2.3e+02 Score=23.71 Aligned_cols=65 Identities=12% Similarity=-0.035 Sum_probs=34.5
Q ss_pred EEecCChhHHHHH-HHhccCCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHh
Q 015729 63 FLIPTTGTGAWES-ALTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLA 131 (401)
Q Consensus 63 i~~~~g~t~a~~~-~~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~ 131 (401)
+++|++ +.++-. +...+.+.|-+|++......... .....+..+.++..+.+|-. |.+.+++.++
T Consensus 14 vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~---~~~~v~~~~~ 80 (264)
T 3ucx_A 14 VVISGV-GPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDIT---DDAQVAHLVD 80 (264)
T ss_dssp EEEESC-CTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT---CHHHHHHHHH
T ss_pred EEEECC-CcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCC---CHHHHHHHHH
Confidence 455544 444433 33556677888887765222111 12223334667777776643 5666666554
No 345
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=20.24 E-value=2.1e+02 Score=23.88 Aligned_cols=80 Identities=13% Similarity=0.077 Sum_probs=41.8
Q ss_pred EEecCChhHHHHHHH-hccCCCCCeEEEE-cCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccC--CCC
Q 015729 63 FLIPTTGTGAWESAL-TNTLSPGDRIISF-LIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT--AHT 137 (401)
Q Consensus 63 i~~~~g~t~a~~~~~-~~~~~~gd~vl~~-~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~--~~~ 137 (401)
+++| |++.++=..+ ..+++.|-+|++. ........ .....+..+.++..+.+|-. |.+.+++.+++-. -.+
T Consensus 7 vlVT-Gas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~---~~~~v~~~~~~~~~~~g~ 82 (258)
T 3oid_A 7 ALVT-GSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVG---QPAKIKEMFQQIDETFGR 82 (258)
T ss_dssp EEES-SCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTT---CHHHHHHHHHHHHHHHSC
T ss_pred EEEe-cCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCC---CHHHHHHHHHHHHHHcCC
Confidence 4444 4555554433 5577788888875 33211111 22223344667777877643 6776666654310 014
Q ss_pred ceEEEEEec
Q 015729 138 IKAICIVHN 146 (401)
Q Consensus 138 ~~~i~~~~~ 146 (401)
+.+++-+..
T Consensus 83 id~lv~nAg 91 (258)
T 3oid_A 83 LDVFVNNAA 91 (258)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 556555543
No 346
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=20.14 E-value=3.6e+02 Score=22.08 Aligned_cols=80 Identities=16% Similarity=0.263 Sum_probs=41.7
Q ss_pred EEecCChhHHHHHHH-hccCCCCCeEEEEc-CCcc-hHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhc---cCCC
Q 015729 63 FLIPTTGTGAWESAL-TNTLSPGDRIISFL-IGQF-SLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAA---DTAH 136 (401)
Q Consensus 63 i~~~~g~t~a~~~~~-~~~~~~gd~vl~~~-~~~~-~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~---~~~~ 136 (401)
.++..|++.++-..+ ..+++.|.+|++.. .... ...........+.++..+..|-. |.+.+++.+++ .- .
T Consensus 15 ~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~---~~~~v~~~~~~~~~~~-g 90 (256)
T 3ezl_A 15 IAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVG---DWDSTKQAFDKVKAEV-G 90 (256)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTT---CHHHHHHHHHHHHHHT-C
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCC---CHHHHHHHHHHHHHhc-C
Confidence 444445555554433 55677888887754 2111 11122333445667777776643 66666665543 11 2
Q ss_pred CceEEEEEec
Q 015729 137 TIKAICIVHN 146 (401)
Q Consensus 137 ~~~~i~~~~~ 146 (401)
++.+++-+..
T Consensus 91 ~id~lv~~Ag 100 (256)
T 3ezl_A 91 EIDVLVNNAG 100 (256)
T ss_dssp CEEEEEECCC
T ss_pred CCCEEEECCC
Confidence 4555555443
No 347
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=20.13 E-value=3e+02 Score=22.80 Aligned_cols=80 Identities=9% Similarity=-0.041 Sum_probs=42.4
Q ss_pred EEecCChhHHHHHHH-hccCCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhc---cCCCC
Q 015729 63 FLIPTTGTGAWESAL-TNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAA---DTAHT 137 (401)
Q Consensus 63 i~~~~g~t~a~~~~~-~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~---~~~~~ 137 (401)
.++..|++.++=..+ ..+++.|.+|++......... .....+..+.++..+.+|-. |.+.+++.+++ .- .+
T Consensus 14 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~---d~~~v~~~~~~~~~~~-g~ 89 (256)
T 3gaf_A 14 VAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVT---DEQHREAVIKAALDQF-GK 89 (256)
T ss_dssp EEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTT---CHHHHHHHHHHHHHHH-SC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCC---CHHHHHHHHHHHHHHc-CC
Confidence 444444555554433 556777888888765322111 22233445677777777643 66666665542 11 14
Q ss_pred ceEEEEEec
Q 015729 138 IKAICIVHN 146 (401)
Q Consensus 138 ~~~i~~~~~ 146 (401)
+.+++-+..
T Consensus 90 id~lv~nAg 98 (256)
T 3gaf_A 90 ITVLVNNAG 98 (256)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 555555543
No 348
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=20.07 E-value=1.7e+02 Score=22.42 Aligned_cols=55 Identities=16% Similarity=0.109 Sum_probs=37.7
Q ss_pred CCChHHHHHHHhccCCCCceEEEEEecCCCcccccch----HHHH-HHhhhcCCCc-EEEEecccc
Q 015729 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL----SKVR-KLLDEYRHPA-LFLVDGVSS 179 (401)
Q Consensus 120 ~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l----~~i~-~l~~~~~~~~-~li~D~a~~ 179 (401)
..+.+.+.+.+++ +++..+++-.|-|..|...+. ...+ .++++ .++ +..+||..+
T Consensus 41 ~~~~~~l~~li~~---~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~--~~lpV~~vDEr~T 101 (150)
T 1vhx_A 41 DYGLSRLSELIKD---YTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETT--YNVPVVLWDERLT 101 (150)
T ss_dssp BCCHHHHHHHHTT---SEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHH--HCSCEEEECCSSC
T ss_pred HHHHHHHHHHHHH---cCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHh--hCCCEEEecCCCC
Confidence 3478899999987 568899999888877777642 2333 34444 455 466788765
No 349
>2ksc_A Cyanoglobin; hemeprotein, 2/2 hemoglobin, GLBN, TRHBN, unknown function; HET: HEB; NMR {Synechococcus SP}
Probab=20.07 E-value=43 Score=24.74 Aligned_cols=36 Identities=11% Similarity=0.166 Sum_probs=28.1
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHH
Q 015729 354 LNELQLLGCLAGVEMILKDVGYPVKLGSGVAAASAY 389 (401)
Q Consensus 354 ~~~~di~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~ 389 (401)
+++++.+..++.+.+++++++++.+....+.+..+-
T Consensus 78 I~~~~fd~wl~~~~~al~e~~~~~~~~~~l~~~~~~ 113 (123)
T 2ksc_A 78 LTDVHFDAIAENLVLTLQELNVSQDLIDEVVTIVGS 113 (123)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 799999999999999999998766555554444433
No 350
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=20.03 E-value=3.8e+02 Score=23.43 Aligned_cols=74 Identities=11% Similarity=-0.009 Sum_probs=45.7
Q ss_pred cCCCCCeEEEEcCCcchHH-----HHHHHHHcCCcEEEEeCCCCC-----CCC---hHHHHHHHhccCCCCceEEEEEec
Q 015729 80 TLSPGDRIISFLIGQFSLL-----WIDQQQRLNFNVDVVESDWGE-----GAK---LDVLASKLAADTAHTIKAICIVHN 146 (401)
Q Consensus 80 ~~~~gd~vl~~~~~~~~~~-----~~~~~~~~g~~~~~v~~~~~~-----~~d---~~~le~~~~~~~~~~~~~i~~~~~ 146 (401)
.+++||+|-++.|...... ..+..+..|.+++.-+.-... .-| .++|.+++.. +.+++|+..-.
T Consensus 13 ~L~~Gd~I~ivaPSs~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~D---p~i~aI~~~rG 89 (311)
T 1zl0_A 13 WQPIDGRVALIAPASAIATDVLEATLRQLEVHGVDYHLGRHVEARYRYLAGTVEQRLEDLHNAFDM---PDITAVWCLRG 89 (311)
T ss_dssp CCCCCSEEEEECCSBCCCHHHHHHHHHHHHHTTCCEEECTTTTCCBTTBSSCHHHHHHHHHHHHHS---TTEEEEEESCC
T ss_pred cCCCcCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEECccccccccccCCCHHHHHHHHHHHHhC---CCCCEEEEccC
Confidence 4789999999988543211 234556689888876543221 112 3466666654 56888888876
Q ss_pred CCCcccccch
Q 015729 147 ETATGVTNNL 156 (401)
Q Consensus 147 ~n~tG~~~~l 156 (401)
-.-+-.+.|.
T Consensus 90 Gyga~rlLp~ 99 (311)
T 1zl0_A 90 GYGCGQLLPG 99 (311)
T ss_dssp SSCGGGGTTT
T ss_pred CcCHHHHhhc
Confidence 6655566653
Done!