BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015731
(401 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 207 bits (528), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 182/311 (58%), Gaps = 18/311 (5%)
Query: 48 EILLGSNIKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAV 107
E+ LG +K FS L+ A+ NF ++LG GGFG V+KG R G ++AV
Sbjct: 19 EVHLG-QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKG----------RLADGTLVAV 67
Query: 108 KRLNQESLQG-HLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLF 166
KRL +E QG L++ TE++ + H NL++L G+C+ RLLVY +M GS+ + L
Sbjct: 68 KRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL- 126
Query: 167 RTGASYIQPLSWTIRMKVALGAAKGLAYLHSD-KAKVIYRDFKTSNILLDLNYNAKLSDF 225
R PL W R ++ALG+A+GLAYLH K+I+RD K +NILLD + A + DF
Sbjct: 127 RERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 186
Query: 226 GLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDK 285
GLAK HV V GT G+ APEY++TG + K+DV+ +GV+LLE+++G+R D
Sbjct: 187 GLAKLMDY-KDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 245
Query: 286 NRPSREHN--LIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFR 343
R + + + L++W K L+ K ++ ++D ++G Y + +A+ C + P R
Sbjct: 246 ARLANDDDVMLLDWVKGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMER 304
Query: 344 PTMDEVVKALE 354
P M EVV+ LE
Sbjct: 305 PKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 181/311 (58%), Gaps = 18/311 (5%)
Query: 48 EILLGSNIKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAV 107
E+ LG +K FS L+ A+ NF ++LG GGFG V+KG R G ++AV
Sbjct: 11 EVHLG-QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKG----------RLADGXLVAV 59
Query: 108 KRLNQESLQG-HLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLF 166
KRL +E QG L++ TE++ + H NL++L G+C+ RLLVY +M GS+ + L
Sbjct: 60 KRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL- 118
Query: 167 RTGASYIQPLSWTIRMKVALGAAKGLAYLHSD-KAKVIYRDFKTSNILLDLNYNAKLSDF 225
R PL W R ++ALG+A+GLAYLH K+I+RD K +NILLD + A + DF
Sbjct: 119 RERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 178
Query: 226 GLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDK 285
GLAK HV V G G+ APEY++TG + K+DV+ +GV+LLE+++G+R D
Sbjct: 179 GLAKLMDY-KDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 237
Query: 286 NRPSREHN--LIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFR 343
R + + + L++W K L+ K ++ ++D ++G Y + +A+ C + P R
Sbjct: 238 ARLANDDDVMLLDWVKGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMER 296
Query: 344 PTMDEVVKALE 354
P M EVV+ LE
Sbjct: 297 PKMSEVVRMLE 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/292 (39%), Positives = 171/292 (58%), Gaps = 14/292 (4%)
Query: 63 LKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL 122
L+ AT NF ++G G FG V+KG + + G +A+KR ES QG E+
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRTPESSQGIEEFE 83
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRM 182
TEI+ L HP+LV LIG+C E + +L+Y++M G+L+ HL+ + + +SW R+
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS-MSWEQRL 142
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
++ +GAA+GL YLH+ +I+RD K+ NILLD N+ K++DFG++K G Q+H+
Sbjct: 143 EICIGAARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV 200
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYL 302
V GT GY PEY G LT KSDVYSFGVVL E+L R I ++ P NL EWA
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES- 259
Query: 303 QSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE 354
+ ++ Q++D + + + K A+KCL+ + RP+M +V+ LE
Sbjct: 260 HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/292 (39%), Positives = 171/292 (58%), Gaps = 14/292 (4%)
Query: 63 LKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL 122
L+ AT NF ++G G FG V+KG + + G +A+KR ES QG E+
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRTPESSQGIEEFE 83
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRM 182
TEI+ L HP+LV LIG+C E + +L+Y++M G+L+ HL+ + + +SW R+
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS-MSWEQRL 142
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
++ +GAA+GL YLH+ +I+RD K+ NILLD N+ K++DFG++K G Q+H+
Sbjct: 143 EICIGAARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXV 200
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYL 302
V GT GY PEY G LT KSDVYSFGVVL E+L R I ++ P NL EWA
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES- 259
Query: 303 QSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE 354
+ ++ Q++D + + + K A+KCL+ + RP+M +V+ LE
Sbjct: 260 HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 176/306 (57%), Gaps = 21/306 (6%)
Query: 57 SFSFNGLKTATRNF--RPDSV----LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL 110
SFSF LK T NF RP SV +GEGGFG V+KG+++ T A + + I + L
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 73
Query: 111 NQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGA 170
Q+ Q EIK + + H NLV+L+G+ + D LVY +MP GSL + L
Sbjct: 74 KQQFDQ-------EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG 126
Query: 171 SYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 230
+ PLSW +R K+A GAA G+ +LH + I+RD K++NILLD + AK+SDFGLA+
Sbjct: 127 T--PPLSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLARA 182
Query: 231 GPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSR 290
+Q+ + +R++GT Y APE + G +T KSD+YSFGVVLLE+++G +D++R +
Sbjct: 183 SEKFAQTVMXSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 241
Query: 291 EHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVV 350
L++ + ++ I +D ++ S +V A +CL + RP + +V
Sbjct: 242 L--LLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSV-ASQCLHEKKNKRPDIKKVQ 298
Query: 351 KALEQI 356
+ L+++
Sbjct: 299 QLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 177 bits (450), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 175/306 (57%), Gaps = 21/306 (6%)
Query: 57 SFSFNGLKTATRNF--RPDSV----LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL 110
SFSF LK T NF RP SV +GEGGFG V+KG+++ T A + + I + L
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 73
Query: 111 NQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGA 170
Q+ Q EIK + + H NLV+L+G+ + D LVY +MP GSL + L
Sbjct: 74 KQQFDQ-------EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG 126
Query: 171 SYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 230
+ PLSW +R K+A GAA G+ +LH + I+RD K++NILLD + AK+SDFGLA+
Sbjct: 127 T--PPLSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLARA 182
Query: 231 GPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSR 290
+Q+ + R++GT Y APE + G +T KSD+YSFGVVLLE+++G +D++R +
Sbjct: 183 SEKFAQTVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 241
Query: 291 EHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVV 350
L++ + ++ I +D ++ S +V A +CL + RP + +V
Sbjct: 242 L--LLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSV-ASQCLHEKKNKRPDIKKVQ 298
Query: 351 KALEQI 356
+ L+++
Sbjct: 299 QLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 174/306 (56%), Gaps = 21/306 (6%)
Query: 57 SFSFNGLKTATRNF--RPDSV----LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL 110
SFSF LK T NF RP SV +GEGGFG V+KG+++ T A + + I + L
Sbjct: 8 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 67
Query: 111 NQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGA 170
Q+ Q EIK + + H NLV+L+G+ + D LVY +MP GSL + L
Sbjct: 68 KQQFDQ-------EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG 120
Query: 171 SYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 230
+ PLSW +R K+A GAA G+ +LH + I+RD K++NILLD + AK+SDFGLA+
Sbjct: 121 T--PPLSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLARA 176
Query: 231 GPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSR 290
+Q + R++GT Y APE + G +T KSD+YSFGVVLLE+++G +D++R +
Sbjct: 177 SEKFAQXVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 235
Query: 291 EHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVV 350
L++ + ++ I +D ++ S +V A +CL + RP + +V
Sbjct: 236 L--LLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSV-ASQCLHEKKNKRPDIKKVQ 292
Query: 351 KALEQI 356
+ L+++
Sbjct: 293 QLLQEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/237 (42%), Positives = 140/237 (59%), Gaps = 18/237 (7%)
Query: 57 SFSFNGLKTATRNF--RPDSV----LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL 110
SFSF LK T NF RP SV GEGGFG V+KG+++ T A + + I + L
Sbjct: 5 SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 64
Query: 111 NQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGA 170
Q+ Q EIK + H NLV+L+G+ + D LVY + P GSL + L
Sbjct: 65 KQQFDQ-------EIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDG 117
Query: 171 SYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 230
+ PLSW R K+A GAA G+ +LH + I+RD K++NILLD + AK+SDFGLA+
Sbjct: 118 T--PPLSWHXRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLARA 173
Query: 231 GPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNR 287
+Q +R++GT Y APE + G +T KSD+YSFGVVLLE+++G +D++R
Sbjct: 174 SEKFAQXVXXSRIVGTTAYXAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHR 229
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 134/283 (47%), Gaps = 33/283 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL--EWLTEIKHLGQLYH 133
+G G FG V + + H G +AVK L ++ E+L E+ + +L H
Sbjct: 45 IGAGSFGTVHRA--EWH---------GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRH 93
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
PN+V +G + + +V E++ +GSL L ++GA + L R+ +A AKG+
Sbjct: 94 PNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAR--EQLDERRRLSMAYDVAKGMN 151
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 253
YLH+ +++RD K+ N+L+D Y K+ DFGL++ S S GT + APE
Sbjct: 152 YLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPE 209
Query: 254 YMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMD 313
+ KSDVYSFGV+L E+ + ++ P++ + + L+ R + +
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVA 269
Query: 314 ARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
A IEG C +NEP RP+ ++ L +
Sbjct: 270 AIIEG----------------CWTNEPWKRPSFATIMDLLRPL 296
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 135/283 (47%), Gaps = 33/283 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL--EWLTEIKHLGQLYH 133
+G G FG V + + H G +AVK L ++ E+L E+ + +L H
Sbjct: 45 IGAGSFGTVHRA--EWH---------GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRH 93
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
PN+V +G + + +V E++ +GSL L ++GA + L R+ +A AKG+
Sbjct: 94 PNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAR--EQLDERRRLSMAYDVAKGMN 151
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 253
YLH+ +++R+ K+ N+L+D Y K+ DFGL++ + S S GT + APE
Sbjct: 152 YLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS--SKSAAGTPEWMAPE 209
Query: 254 YMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMD 313
+ KSDVYSFGV+L E+ + ++ P++ + + L+ R + +
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVA 269
Query: 314 ARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
A IEG C +NEP RP+ ++ L +
Sbjct: 270 AIIEG----------------CWTNEPWKRPSFATIMDLLRPL 296
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 144/305 (47%), Gaps = 50/305 (16%)
Query: 73 DSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQL 131
+ V+G G FG V K W + +A+K++ ES + + E++ L ++
Sbjct: 14 EEVVGRGAFGVVCKAKWRAKD------------VAIKQIESESERKAF--IVELRQLSRV 59
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKG 191
HPN+VKL G CL + LV E+ GSL N L GA + + M L ++G
Sbjct: 60 NHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLH--GAEPLPYYTAAHAMSWCLQCSQG 115
Query: 192 LAYLHSDKAK-VIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
+AYLHS + K +I+RD K N+LL K+ DFG A D Q+H+ T G+ +
Sbjct: 116 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD----IQTHM-TNNKGSAAW 170
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIF 309
APE + + K DV+S+G++L E+++ R KP+ + F
Sbjct: 171 MAPEVFEGSNYSEKCDVFSWGIILWEVITRR------------------KPFDEIGGPAF 212
Query: 310 QVMDARIEG-QYSLGAALKTAV--LAIKCLSNEPKFRPTMDEVVKALEQIQDTNDAGVSR 366
++M A G + L L + L +C S +P RP+M+E+VK + +
Sbjct: 213 RIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGA--- 269
Query: 367 DESLQ 371
DE LQ
Sbjct: 270 DEPLQ 274
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 143/305 (46%), Gaps = 50/305 (16%)
Query: 73 DSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQL 131
+ V+G G FG V K W +A+K++ ES + + E++ L ++
Sbjct: 13 EEVVGRGAFGVVCKAKW------------RAKDVAIKQIESESERKAF--IVELRQLSRV 58
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKG 191
HPN+VKL G CL + LV E+ GSL N L GA + + M L ++G
Sbjct: 59 NHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLH--GAEPLPYYTAAHAMSWCLQCSQG 114
Query: 192 LAYLHSDKAK-VIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
+AYLHS + K +I+RD K N+LL K+ DFG A D Q+H+ T G+ +
Sbjct: 115 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD----IQTHM-TNNKGSAAW 169
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIF 309
APE + + K DV+S+G++L E+++ R KP+ + F
Sbjct: 170 MAPEVFEGSNYSEKCDVFSWGIILWEVITRR------------------KPFDEIGGPAF 211
Query: 310 QVMDARIEG-QYSLGAALKTAV--LAIKCLSNEPKFRPTMDEVVKALEQIQDTNDAGVSR 366
++M A G + L L + L +C S +P RP+M+E+VK + +
Sbjct: 212 RIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGA--- 268
Query: 367 DESLQ 371
DE LQ
Sbjct: 269 DEPLQ 273
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 135/287 (47%), Gaps = 19/287 (6%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLYHP 134
LGEG FG V + Y P GTG ++AVK L + H W EI L LYH
Sbjct: 22 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
+++K G C + + LV E++P GSL ++L R Q L + ++ +G+
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQI------CEGM 130
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH-VSTRVMGTYGYAA 251
AYLHS I+R+ N+LLD + K+ DFGLAK P G + + V + A
Sbjct: 131 AYLHSQH--YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 188
Query: 252 PEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQV 311
PE + SDV+SFGV L E+L+ ++ P++ LI A+ + + R+ ++
Sbjct: 189 PECLKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQGQM-TVLRLTEL 246
Query: 312 MDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQD 358
++ + L C E FRPT + ++ L+ + +
Sbjct: 247 LERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHE 293
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 136/288 (47%), Gaps = 21/288 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLYHP 134
LGEG FG V + Y P GTG ++AVK L ++ H W EI L LYH
Sbjct: 39 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHE 93
Query: 135 NLVKLIGYCLEDD---HRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKG 191
+++K G C ED LV E++P GSL ++L R Q L + ++ +G
Sbjct: 94 HIIKYKG-CCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQI------CEG 146
Query: 192 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH-VSTRVMGTYGYA 250
+AYLH+ I+RD N+LLD + K+ DFGLAK P G + + V +
Sbjct: 147 MAYLHAQH--YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY 204
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQ 310
APE + SDV+SFGV L E+L+ ++ P++ LI A+ + + R+ +
Sbjct: 205 APECLKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQGQM-TVLRLTE 262
Query: 311 VMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQD 358
+++ + L C E FRPT + ++ L+ + +
Sbjct: 263 LLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 135/287 (47%), Gaps = 19/287 (6%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLYHP 134
LGEG FG V + Y P GTG ++AVK L + H W EI L LYH
Sbjct: 22 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
+++K G C + + LV E++P GSL ++L R Q L + ++ +G+
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQI------CEGM 130
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH-VSTRVMGTYGYAA 251
AYLH+ I+R+ N+LLD + K+ DFGLAK P G + + V + A
Sbjct: 131 AYLHAQH--YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 188
Query: 252 PEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQV 311
PE + SDV+SFGV L E+L+ ++ P++ LI A+ + + R+ ++
Sbjct: 189 PECLKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQGQM-TVLRLTEL 246
Query: 312 MDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQD 358
++ + L C E FRPT + ++ L+ + +
Sbjct: 247 LERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHE 293
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 148/299 (49%), Gaps = 32/299 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 74
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKVALGAAK 190
N+VK G C R L+ EF+P GSL +L + +I+ L +T ++ K
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQI------CK 128
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ-SHVSTRVMGTYGY 249
G+ YL + + I+RD T NIL++ K+ DFGL K P + V +
Sbjct: 129 GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNR--PSREHNLIEWAKPYLQSKRR 307
APE + + SDV+SFGVVL E+ + I+K++ P+ +I K Q +
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDK---QGQMI 240
Query: 308 IFQVMD-ARIEGQYSL--GAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDTNDAG 363
+F +++ + G+ G + ++ +C +N RP+ ++ ++QI+D N AG
Sbjct: 241 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD-NMAG 298
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 155/316 (49%), Gaps = 32/316 (10%)
Query: 59 SFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGH 118
S N + R+ + LG+G FG V + Y P + TG V+AVK+L Q S + H
Sbjct: 19 SHNMTQFEERHLKFLQQLGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEH 72
Query: 119 L-EWLTEIKHLGQLYHPNLVKLIGYCLEDDHR--LLVYEFMPKGSLENHL--FRTGASYI 173
L ++ EI+ L L H N+VK G C R L+ E++P GSL ++L + +I
Sbjct: 73 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 132
Query: 174 QPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPT 233
+ L +T ++ KG+ YL + + I+RD T NIL++ K+ DFGL K P
Sbjct: 133 KLLQYTSQI------CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 184
Query: 234 GSQ-SHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNR--PSR 290
+ V + APE + + SDV+SFGVVL E+ + I+K++ P+
Sbjct: 185 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAE 241
Query: 291 EHNLIEWAKPYLQSKRRIFQVMD-ARIEGQYSL--GAALKTAVLAIKCLSNEPKFRPTMD 347
+I K Q + +F +++ + G+ G + ++ +C +N RP+
Sbjct: 242 FMRMIGNDK---QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFR 298
Query: 348 EVVKALEQIQDTNDAG 363
++ ++QI+D N AG
Sbjct: 299 DLALRVDQIRD-NMAG 313
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 152/312 (48%), Gaps = 31/312 (9%)
Query: 59 SFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGH 118
S N + R+ + LG+G FG V + Y P + TG V+AVK+L Q S + H
Sbjct: 19 SHNMTQFEERHLKFLQQLGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEH 72
Query: 119 L-EWLTEIKHLGQLYHPNLVKLIGYCLEDDHR--LLVYEFMPKGSLENHL--FRTGASYI 173
L ++ EI+ L L H N+VK G C R L+ E++P GSL ++L + +I
Sbjct: 73 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 132
Query: 174 QPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPT 233
+ L +T ++ KG+ YL + + I+RD T NIL++ K+ DFGL K P
Sbjct: 133 KLLQYTSQI------CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 184
Query: 234 GSQ-SHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNR--PSR 290
+ V + APE + + SDV+SFGVVL E+ + I+K++ P+
Sbjct: 185 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAE 241
Query: 291 EHNLIEWAKPYLQSKRRIFQVMD-ARIEGQYSL--GAALKTAVLAIKCLSNEPKFRPTMD 347
+I K Q + +F +++ + G+ G + ++ +C +N RP+
Sbjct: 242 FMRMIGNDK---QGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFR 298
Query: 348 EVVKALEQIQDT 359
++ ++QI+D
Sbjct: 299 DLALRVDQIRDN 310
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 150/300 (50%), Gaps = 32/300 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 22 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 75
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKVALGAAK 190
N+VK G C R L+ E++P GSL ++L + +I+ L +T ++ K
Sbjct: 76 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CK 129
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ-SHVSTRVMGTYGY 249
G+ YL + + I+RD T NIL++ K+ DFGL K P + V +
Sbjct: 130 GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 187
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNR--PSREHNLIEWAKPYLQSKRR 307
APE + + SDV+SFGVVL E+ + I+K++ P+ +I K Q +
Sbjct: 188 YAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDK---QGQMI 241
Query: 308 IFQVMD-ARIEGQYSL--GAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDTNDAGV 364
+F +++ + G+ G + ++ +C +N RP+ ++ ++QI+D N AG+
Sbjct: 242 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD-NMAGL 300
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 149/299 (49%), Gaps = 32/299 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 71
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKVALGAAK 190
N+VK G C R L+ E++P GSL ++L + +I+ L +T ++ K
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CK 125
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ-SHVSTRVMGTYGY 249
G+ YL + + I+RD T NIL++ K+ DFGL K P + V +
Sbjct: 126 GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNR--PSREHNLIEWAKPYLQSKRR 307
APE + + SDV+SFGVVL E+ + I+K++ P+ +I K Q +
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDK---QGQMI 237
Query: 308 IFQVMD-ARIEGQYSL--GAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDTNDAG 363
+F +++ + G+ G + ++ +C +N RP+ ++ ++QI+D N AG
Sbjct: 238 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD-NMAG 295
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 149/299 (49%), Gaps = 32/299 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 25 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 78
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKVALGAAK 190
N+VK G C R L+ E++P GSL ++L + +I+ L +T ++ K
Sbjct: 79 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CK 132
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ-SHVSTRVMGTYGY 249
G+ YL + + I+RD T NIL++ K+ DFGL K P + V +
Sbjct: 133 GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 190
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNR--PSREHNLIEWAKPYLQSKRR 307
APE + + SDV+SFGVVL E+ + I+K++ P+ +I K Q +
Sbjct: 191 YAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDK---QGQMI 244
Query: 308 IFQVMD-ARIEGQYSL--GAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDTNDAG 363
+F +++ + G+ G + ++ +C +N RP+ ++ ++QI+D N AG
Sbjct: 245 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD-NMAG 302
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 149/299 (49%), Gaps = 32/299 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 74
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKVALGAAK 190
N+VK G C R L+ E++P GSL ++L + +I+ L +T ++ K
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CK 128
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ-SHVSTRVMGTYGY 249
G+ YL + + I+RD T NIL++ K+ DFGL K P + V +
Sbjct: 129 GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNR--PSREHNLIEWAKPYLQSKRR 307
APE + + SDV+SFGVVL E+ + I+K++ P+ +I K Q +
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDK---QGQMI 240
Query: 308 IFQVMD-ARIEGQYSL--GAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDTNDAG 363
+F +++ + G+ G + ++ +C +N RP+ ++ ++QI+D N AG
Sbjct: 241 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD-NMAG 298
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 149/299 (49%), Gaps = 32/299 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 23 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 76
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKVALGAAK 190
N+VK G C R L+ E++P GSL ++L + +I+ L +T ++ K
Sbjct: 77 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CK 130
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ-SHVSTRVMGTYGY 249
G+ YL + + I+RD T NIL++ K+ DFGL K P + V +
Sbjct: 131 GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 188
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNR--PSREHNLIEWAKPYLQSKRR 307
APE + + SDV+SFGVVL E+ + I+K++ P+ +I K Q +
Sbjct: 189 YAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDK---QGQMI 242
Query: 308 IFQVMD-ARIEGQYSL--GAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDTNDAG 363
+F +++ + G+ G + ++ +C +N RP+ ++ ++QI+D N AG
Sbjct: 243 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD-NMAG 300
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 149/299 (49%), Gaps = 32/299 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 24 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 77
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKVALGAAK 190
N+VK G C R L+ E++P GSL ++L + +I+ L +T ++ K
Sbjct: 78 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CK 131
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ-SHVSTRVMGTYGY 249
G+ YL + + I+RD T NIL++ K+ DFGL K P + V +
Sbjct: 132 GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 189
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNR--PSREHNLIEWAKPYLQSKRR 307
APE + + SDV+SFGVVL E+ + I+K++ P+ +I K Q +
Sbjct: 190 YAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDK---QGQMI 243
Query: 308 IFQVMD-ARIEGQYSL--GAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDTNDAG 363
+F +++ + G+ G + ++ +C +N RP+ ++ ++QI+D N AG
Sbjct: 244 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD-NMAG 301
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 149/299 (49%), Gaps = 32/299 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 71
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKVALGAAK 190
N+VK G C R L+ E++P GSL ++L + +I+ L +T ++ K
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CK 125
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ-SHVSTRVMGTYGY 249
G+ YL + + I+RD T NIL++ K+ DFGL K P + V +
Sbjct: 126 GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNR--PSREHNLIEWAKPYLQSKRR 307
APE + + SDV+SFGVVL E+ + I+K++ P+ +I K Q +
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDK---QGQMI 237
Query: 308 IFQVMD-ARIEGQYSL--GAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDTNDAG 363
+F +++ + G+ G + ++ +C +N RP+ ++ ++QI+D N AG
Sbjct: 238 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD-NMAG 295
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 146/294 (49%), Gaps = 31/294 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 49 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 102
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKVALGAAK 190
N+VK G C R L+ E++P GSL ++L + +I+ L +T ++ K
Sbjct: 103 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CK 156
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ-SHVSTRVMGTYGY 249
G+ YL + + I+RD T NIL++ K+ DFGL K P + V +
Sbjct: 157 GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 214
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNR--PSREHNLIEWAKPYLQSKRR 307
APE + + SDV+SFGVVL E+ + I+K++ P+ +I K Q +
Sbjct: 215 YAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDK---QGQMI 268
Query: 308 IFQVMD-ARIEGQYSL--GAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQD 358
+F +++ + G+ G + ++ +C +N RP+ ++ ++QI+D
Sbjct: 269 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 146/295 (49%), Gaps = 31/295 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 17 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 70
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKVALGAAK 190
N+VK G C R L+ E++P GSL ++L + +I+ L +T ++ K
Sbjct: 71 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CK 124
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ-SHVSTRVMGTYGY 249
G+ YL + + I+RD T NIL++ K+ DFGL K P + V +
Sbjct: 125 GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 182
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNR--PSREHNLIEWAKPYLQSKRR 307
APE + + SDV+SFGVVL E+ + I+K++ P+ +I K Q +
Sbjct: 183 YAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDK---QGQMI 236
Query: 308 IFQVMD-ARIEGQYSL--GAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDT 359
+F +++ + G+ G + ++ +C +N RP+ ++ ++QI+D
Sbjct: 237 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 291
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 146/294 (49%), Gaps = 31/294 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 16 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 69
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKVALGAAK 190
N+VK G C R L+ E++P GSL ++L + +I+ L +T ++ K
Sbjct: 70 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CK 123
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ-SHVSTRVMGTYGY 249
G+ YL + + I+RD T NIL++ K+ DFGL K P + V +
Sbjct: 124 GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 181
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNR--PSREHNLIEWAKPYLQSKRR 307
APE + + SDV+SFGVVL E+ + I+K++ P+ +I K Q +
Sbjct: 182 YAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDK---QGQMI 235
Query: 308 IFQVMD-ARIEGQYSL--GAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQD 358
+F +++ + G+ G + ++ +C +N RP+ ++ ++QI+D
Sbjct: 236 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 289
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 149/299 (49%), Gaps = 32/299 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 71
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKVALGAAK 190
N+VK G C R L+ E++P GSL ++L + +I+ L +T ++ K
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CK 125
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH-VSTRVMGTYGY 249
G+ YL + + I+RD T NIL++ K+ DFGL K P + V +
Sbjct: 126 GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFW 183
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNR--PSREHNLIEWAKPYLQSKRR 307
APE + + SDV+SFGVVL E+ + I+K++ P+ +I K Q +
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDK---QGQMI 237
Query: 308 IFQVMD-ARIEGQYSL--GAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDTNDAG 363
+F +++ + G+ G + ++ +C +N RP+ ++ ++QI+D N AG
Sbjct: 238 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD-NMAG 295
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 130/290 (44%), Gaps = 25/290 (8%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES-LQGHLEWLTEIKHLGQLYHP 134
LGEG FG V + Y P GTG ++AVK L + Q W EI+ L LYH
Sbjct: 17 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 71
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
++VK G C + + LV E++P GSL ++L R Q L + ++ +G+
Sbjct: 72 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQI------CEGM 125
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH-VSTRVMGTYGYAA 251
AYLH+ I+R N+LLD + K+ DFGLAK P G + + V + A
Sbjct: 126 AYLHAQH--YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 183
Query: 252 PEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQV 311
PE + SDV+SFGV L E+L+ D N+ H + Q + + ++
Sbjct: 184 PECLKECKFYYASDVWSFGVTLYELLT---YCDSNQSP--HTKFTELIGHTQGQMTVLRL 238
Query: 312 MDARIEGQ---YSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQD 358
+ G+ + L C E FRPT +V L+ Q+
Sbjct: 239 TELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQE 288
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 130/290 (44%), Gaps = 25/290 (8%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES-LQGHLEWLTEIKHLGQLYHP 134
LGEG FG V + Y P GTG ++AVK L + Q W EI+ L LYH
Sbjct: 16 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 70
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
++VK G C + + LV E++P GSL ++L R Q L + ++ +G+
Sbjct: 71 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQI------CEGM 124
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH-VSTRVMGTYGYAA 251
AYLH+ I+R N+LLD + K+ DFGLAK P G + + V + A
Sbjct: 125 AYLHAQH--YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 182
Query: 252 PEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQV 311
PE + SDV+SFGV L E+L+ D N+ H + Q + + ++
Sbjct: 183 PECLKECKFYYASDVWSFGVTLYELLT---YCDSNQSP--HTKFTELIGHTQGQMTVLRL 237
Query: 312 MDARIEGQ---YSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQD 358
+ G+ + L C E FRPT +V L+ Q+
Sbjct: 238 TELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQE 287
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 150/299 (50%), Gaps = 32/299 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 19 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 72
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKVALGAAK 190
N+VK G C R L+ E++P GSL ++L + +I+ L +T ++ K
Sbjct: 73 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CK 126
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH-VSTRVMGTYGY 249
G+ YL + + I+R+ T NIL++ K+ DFGL K P + + V +
Sbjct: 127 GMEYLGT--KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFW 184
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNR--PSREHNLIEWAKPYLQSKRR 307
APE + + SDV+SFGVVL E+ + I+K++ P+ +I K Q +
Sbjct: 185 YAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDK---QGQMI 238
Query: 308 IFQVMD-ARIEGQYSL--GAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDTNDAG 363
+F +++ + G+ G + ++ +C +N RP+ ++ ++QI+D N AG
Sbjct: 239 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD-NMAG 296
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 113/222 (50%), Gaps = 38/222 (17%)
Query: 73 DSVLGEGGFGCVFKG-WI-DEHTYAPAR--PGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ ++G GGFG V++ WI DE AR P + ++ + QE+ K
Sbjct: 12 EEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEA-----------KLF 60
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
L HPN++ L G CL++ + LV EF G L L I P I + A+
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL---SGKRIPP---DILVNWAVQI 114
Query: 189 AKGLAYLHSDK-AKVIYRDFKTSNILL-------DL-NYNAKLSDFGLAKDGPTGSQSHV 239
A+G+ YLH + +I+RD K+SNIL+ DL N K++DFGLA+ + H
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR------EWHR 168
Query: 240 STRV--MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+T++ G Y + APE + + SDV+S+GV+L E+L+G
Sbjct: 169 TTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 148/299 (49%), Gaps = 32/299 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 74
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKVALGAAK 190
N+VK G C R L+ E++P GSL ++L +I+ L +T ++ K
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQI------CK 128
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ-SHVSTRVMGTYGY 249
G+ YL + + I+RD T NIL++ K+ DFGL K P + V +
Sbjct: 129 GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNR--PSREHNLIEWAKPYLQSKRR 307
APE + + SDV+SFGVVL E+ + I+K++ P+ +I K Q +
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDK---QGQMI 240
Query: 308 IFQVMD-ARIEGQYSL--GAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDTNDAG 363
+F +++ + G+ G + ++ +C +N RP+ ++ ++QI+D N AG
Sbjct: 241 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD-NMAG 298
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 134/290 (46%), Gaps = 46/290 (15%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
+G G FG V G W+++ +A+K + + S+ +++ E + + +L HP
Sbjct: 35 IGSGQFGLVHLGYWLNKDK-----------VAIKTIKEGSMSED-DFIEEAEVMMKLSHP 82
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAY 194
LV+L G CLE LV+EFM G L ++L RT + + L +G+AY
Sbjct: 83 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAA---ETLLGMCLDVCEGMAY 138
Query: 195 LHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEY 254
L ++A VI+RD N L+ N K+SDFG+ + Q ST +A+PE
Sbjct: 139 L--EEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEV 195
Query: 255 MATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSRE-----HNLIEWAKPYLQSKRRIF 309
+ ++KSDV+SFGV++ E+ S ++ +NR + E KP L S ++
Sbjct: 196 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAST-HVY 254
Query: 310 QVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDT 359
Q+M+ C P+ RP +++ L +I ++
Sbjct: 255 QIMN--------------------HCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 104/208 (50%), Gaps = 17/208 (8%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT-EIKHLGQLYHP 134
LGEG FG V + Y P TG +AVK L ES H+ L EI+ L LYH
Sbjct: 29 LGEGHFGKV-----ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83
Query: 135 NLVKLIGYCLED--DHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
N+VK G C ED + L+ EF+P GSL+ +L + ++ ++K A+ KG+
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK----INLKQQLKYAVQICKGM 139
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV--STRVMGTYGYA 250
YL S + ++RD N+L++ + K+ DFGL K T + R + Y
Sbjct: 140 DYLGS--RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY- 196
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLS 278
APE + SDV+SFGV L E+L+
Sbjct: 197 APECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 104/208 (50%), Gaps = 17/208 (8%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT-EIKHLGQLYHP 134
LGEG FG V + Y P TG +AVK L ES H+ L EI+ L LYH
Sbjct: 17 LGEGHFGKV-----ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 71
Query: 135 NLVKLIGYCLED--DHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
N+VK G C ED + L+ EF+P GSL+ +L + ++ ++K A+ KG+
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK----INLKQQLKYAVQICKGM 127
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV--STRVMGTYGYA 250
YL S + ++RD N+L++ + K+ DFGL K T + R + Y
Sbjct: 128 DYLGS--RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY- 184
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLS 278
APE + SDV+SFGV L E+L+
Sbjct: 185 APECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 134/290 (46%), Gaps = 46/290 (15%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
+G G FG V G W+++ +A+K + + ++ +++ E + + +L HP
Sbjct: 15 IGSGQFGLVHLGYWLNKDK-----------VAIKTIREGAMSEE-DFIEEAEVMMKLSHP 62
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAY 194
LV+L G CLE LV+EFM G L ++L RT + + L +G+AY
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAA---ETLLGMCLDVCEGMAY 118
Query: 195 LHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEY 254
L ++A VI+RD N L+ N K+SDFG+ + Q ST +A+PE
Sbjct: 119 L--EEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEV 175
Query: 255 MATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSRE-----HNLIEWAKPYLQSKRRIF 309
+ ++KSDV+SFGV++ E+ S ++ +NR + E KP L S ++
Sbjct: 176 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAST-HVY 234
Query: 310 QVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDT 359
Q+M+ C P+ RP +++ L +I ++
Sbjct: 235 QIMN--------------------HCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 134/290 (46%), Gaps = 46/290 (15%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
+G G FG V G W+++ +A+K + + ++ +++ E + + +L HP
Sbjct: 13 IGSGQFGLVHLGYWLNKDK-----------VAIKTIREGAMSEE-DFIEEAEVMMKLSHP 60
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAY 194
LV+L G CLE LV+EFM G L ++L RT + + L +G+AY
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAA---ETLLGMCLDVCEGMAY 116
Query: 195 LHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEY 254
L ++A VI+RD N L+ N K+SDFG+ + Q ST +A+PE
Sbjct: 117 L--EEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEV 173
Query: 255 MATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSRE-----HNLIEWAKPYLQSKRRIF 309
+ ++KSDV+SFGV++ E+ S ++ +NR + E KP L S ++
Sbjct: 174 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAST-HVY 232
Query: 310 QVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDT 359
Q+M+ C P+ RP +++ L +I ++
Sbjct: 233 QIMN--------------------HCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 134/290 (46%), Gaps = 46/290 (15%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
+G G FG V G W+++ +A+K + + ++ +++ E + + +L HP
Sbjct: 18 IGSGQFGLVHLGYWLNKDK-----------VAIKTIREGAMSEE-DFIEEAEVMMKLSHP 65
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAY 194
LV+L G CLE LV+EFM G L ++L RT + + L +G+AY
Sbjct: 66 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAA---ETLLGMCLDVCEGMAY 121
Query: 195 LHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEY 254
L ++A VI+RD N L+ N K+SDFG+ + Q ST +A+PE
Sbjct: 122 L--EEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEV 178
Query: 255 MATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSRE-----HNLIEWAKPYLQSKRRIF 309
+ ++KSDV+SFGV++ E+ S ++ +NR + E KP L S ++
Sbjct: 179 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAST-HVY 237
Query: 310 QVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDT 359
Q+M+ C P+ RP +++ L +I ++
Sbjct: 238 QIMN--------------------HCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 113/224 (50%), Gaps = 34/224 (15%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-------NQESLQGHLEWLTEIKHL 128
+G+GGFG V KG + + V+A+K L E ++ E+ E+ +
Sbjct: 27 IGKGGFGLVHKGRLVKDKS---------VVAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
L HPN+VKL Y L + +V EF+P G L + L P+ W++++++ L
Sbjct: 78 SNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDI 131
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLD-LNYN----AKLSDFGLAKDGPTGSQSHVSTRV 243
A G+ Y+ + +++RD ++ NI L L+ N AK++DFGL++ H + +
Sbjct: 132 ALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGL 186
Query: 244 MGTYGYAAPEYMATGH--LTAKSDVYSFGVVLLEMLSGRRVIDK 285
+G + + APE + T K+D YSF ++L +L+G D+
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 135/292 (46%), Gaps = 34/292 (11%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 34 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 87
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLF-RTGASYIQPLSWTIRMKVALGAA 189
HPN++ L+G CL + L+V +M G L N + T ++ L + L A
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVA 142
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD--GPTGSQSHVSTRVMGTY 247
KG+ YL S K ++RD N +LD + K++DFGLA+D H T
Sbjct: 143 KGMKYLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPV 200
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRR 307
+ A E + T T KSDV+SFGV+L E+++ P + N + YL RR
Sbjct: 201 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRR 254
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDT 359
+ Q +Y + + +KC + + RP+ E+V + I T
Sbjct: 255 LLQ-------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFST 296
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 131/287 (45%), Gaps = 46/287 (16%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
+G G FG V G W+++ +A+K + + ++ +++ E + + +L HP
Sbjct: 15 IGSGQFGLVHLGYWLNKDK-----------VAIKTIREGAMSEE-DFIEEAEVMMKLSHP 62
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAY 194
LV+L G CLE LV+EFM G L ++L RT + + L +G+AY
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAA---ETLLGMCLDVCEGMAY 118
Query: 195 LHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEY 254
L ++A VI+RD N L+ N K+SDFG+ + Q ST +A+PE
Sbjct: 119 L--EEASVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEV 175
Query: 255 MATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSRE-----HNLIEWAKPYLQSKRRIF 309
+ ++KSDV+SFGV++ E+ S ++ +NR + E KP L S ++
Sbjct: 176 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAST-HVY 234
Query: 310 QVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
Q+M+ C P+ RP +++ L I
Sbjct: 235 QIMN--------------------HCWKERPEDRPAFSRLLRQLAAI 261
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 141/315 (44%), Gaps = 47/315 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 19 LGGGQFGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 68
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L+G C + ++ EFM G+L ++L Q +S + + +A + + YL
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR---QEVSAVVLLYMATQISSAMEYL 125
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +
Sbjct: 126 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESL 182
Query: 256 ATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDA 314
A + KSDV++FGV+L E+ + G PS+ + L+E D
Sbjct: 183 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE---------------KDY 227
Query: 315 RIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDTNDAGVSRDESLQNSD 374
R+E G K L C P RP+ E+ +A E + Q S
Sbjct: 228 RMER--PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM-------------FQESS 272
Query: 375 RSTYKRKGLNENGQG 389
S K L + G+G
Sbjct: 273 ISDEVEKELGKRGEG 287
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 113/225 (50%), Gaps = 36/225 (16%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-------NQESLQGHLEWLTEIKHL 128
+G+GGFG V KG + + V+A+K L E ++ E+ E+ +
Sbjct: 27 IGKGGFGLVHKGRLVKDKS---------VVAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
L HPN+VKL Y L + +V EF+P G L + L P+ W++++++ L
Sbjct: 78 SNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDI 131
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLD-LNYN----AKLSDFGLAKDGPTGSQS-HVSTR 242
A G+ Y+ + +++RD ++ NI L L+ N AK++DFG T QS H +
Sbjct: 132 ALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG------TSQQSVHSVSG 185
Query: 243 VMGTYGYAAPEYMATGH--LTAKSDVYSFGVVLLEMLSGRRVIDK 285
++G + + APE + T K+D YSF ++L +L+G D+
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 135/292 (46%), Gaps = 34/292 (11%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLF-RTGASYIQPLSWTIRMKVALGAA 189
HPN++ L+G CL + L+V +M G L N + T ++ L + L A
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVA 143
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD--GPTGSQSHVSTRVMGTY 247
KG+ YL S K ++RD N +LD + K++DFGLA+D H T
Sbjct: 144 KGMKYLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 201
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRR 307
+ A E + T T KSDV+SFGV+L E+++ P + N + YL RR
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRR 255
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDT 359
+ Q +Y + + +KC + + RP+ E+V + I T
Sbjct: 256 LLQ-------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFST 297
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 135/292 (46%), Gaps = 34/292 (11%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 33 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 86
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLF-RTGASYIQPLSWTIRMKVALGAA 189
HPN++ L+G CL + L+V +M G L N + T ++ L + L A
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVA 141
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD--GPTGSQSHVSTRVMGTY 247
KG+ YL S K ++RD N +LD + K++DFGLA+D H T
Sbjct: 142 KGMKYLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 199
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRR 307
+ A E + T T KSDV+SFGV+L E+++ P + N + YL RR
Sbjct: 200 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRR 253
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDT 359
+ Q +Y + + +KC + + RP+ E+V + I T
Sbjct: 254 LLQ-------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFST 295
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 135/292 (46%), Gaps = 34/292 (11%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 27 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 80
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLF-RTGASYIQPLSWTIRMKVALGAA 189
HPN++ L+G CL + L+V +M G L N + T ++ L + L A
Sbjct: 81 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVA 135
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD--GPTGSQSHVSTRVMGTY 247
KG+ YL S K ++RD N +LD + K++DFGLA+D H T
Sbjct: 136 KGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 193
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRR 307
+ A E + T T KSDV+SFGV+L E+++ P + N + YL RR
Sbjct: 194 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRR 247
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDT 359
+ Q +Y + + +KC + + RP+ E+V + I T
Sbjct: 248 LLQ-------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFST 289
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 135/292 (46%), Gaps = 34/292 (11%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 34 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 87
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLF-RTGASYIQPLSWTIRMKVALGAA 189
HPN++ L+G CL + L+V +M G L N + T ++ L + L A
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVA 142
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD--GPTGSQSHVSTRVMGTY 247
KG+ YL S K ++RD N +LD + K++DFGLA+D H T
Sbjct: 143 KGMKYLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 200
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRR 307
+ A E + T T KSDV+SFGV+L E+++ P + N + YL RR
Sbjct: 201 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRR 254
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDT 359
+ Q +Y + + +KC + + RP+ E+V + I T
Sbjct: 255 LLQ-------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFST 296
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 135/292 (46%), Gaps = 34/292 (11%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 53 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 106
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLF-RTGASYIQPLSWTIRMKVALGAA 189
HPN++ L+G CL + L+V +M G L N + T ++ L + L A
Sbjct: 107 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVA 161
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD--GPTGSQSHVSTRVMGTY 247
KG+ YL S K ++RD N +LD + K++DFGLA+D H T
Sbjct: 162 KGMKYLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 219
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRR 307
+ A E + T T KSDV+SFGV+L E+++ P + N + YL RR
Sbjct: 220 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRR 273
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDT 359
+ Q +Y + + +KC + + RP+ E+V + I T
Sbjct: 274 LLQ-------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFST 315
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 135/292 (46%), Gaps = 34/292 (11%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 54 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 107
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLF-RTGASYIQPLSWTIRMKVALGAA 189
HPN++ L+G CL + L+V +M G L N + T ++ L + L A
Sbjct: 108 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVA 162
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD--GPTGSQSHVSTRVMGTY 247
KG+ YL S K ++RD N +LD + K++DFGLA+D H T
Sbjct: 163 KGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 220
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRR 307
+ A E + T T KSDV+SFGV+L E+++ P + N + YL RR
Sbjct: 221 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRR 274
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDT 359
+ Q +Y + + +KC + + RP+ E+V + I T
Sbjct: 275 LLQ-------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFST 316
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 135/292 (46%), Gaps = 34/292 (11%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 32 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 85
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLF-RTGASYIQPLSWTIRMKVALGAA 189
HPN++ L+G CL + L+V +M G L N + T ++ L + L A
Sbjct: 86 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVA 140
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD--GPTGSQSHVSTRVMGTY 247
KG+ YL S K ++RD N +LD + K++DFGLA+D H T
Sbjct: 141 KGMKYLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 198
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRR 307
+ A E + T T KSDV+SFGV+L E+++ P + N + YL RR
Sbjct: 199 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRR 252
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDT 359
+ Q +Y + + +KC + + RP+ E+V + I T
Sbjct: 253 LLQ-------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFST 294
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 135/292 (46%), Gaps = 34/292 (11%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLF-RTGASYIQPLSWTIRMKVALGAA 189
HPN++ L+G CL + L+V +M G L N + T ++ L + L A
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVA 143
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD--GPTGSQSHVSTRVMGTY 247
KG+ YL S K ++RD N +LD + K++DFGLA+D H T
Sbjct: 144 KGMKYLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 201
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRR 307
+ A E + T T KSDV+SFGV+L E+++ P + N + YL RR
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRR 255
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDT 359
+ Q +Y + + +KC + + RP+ E+V + I T
Sbjct: 256 LLQ-------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFST 297
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 135/292 (46%), Gaps = 34/292 (11%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 30 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 83
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLF-RTGASYIQPLSWTIRMKVALGAA 189
HPN++ L+G CL + L+V +M G L N + T ++ L + L A
Sbjct: 84 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVA 138
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD--GPTGSQSHVSTRVMGTY 247
KG+ YL S K ++RD N +LD + K++DFGLA+D H T
Sbjct: 139 KGMKYLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 196
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRR 307
+ A E + T T KSDV+SFGV+L E+++ P + N + YL RR
Sbjct: 197 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRR 250
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDT 359
+ Q +Y + + +KC + + RP+ E+V + I T
Sbjct: 251 LLQ-------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFST 292
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 34/292 (11%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 94 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 147
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLF-RTGASYIQPLSWTIRMKVALGAA 189
HPN++ L+G CL + L+V +M G L N + T ++ L + L A
Sbjct: 148 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVA 202
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD--GPTGSQSHVSTRVMGTY 247
KG+ +L S K ++RD N +LD + K++DFGLA+D H T
Sbjct: 203 KGMKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 260
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRR 307
+ A E + T T KSDV+SFGV+L E+++ P + N + YL RR
Sbjct: 261 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRR 314
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDT 359
+ Q +Y + + +KC + + RP+ E+V + I T
Sbjct: 315 LLQ-------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFST 356
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 34/292 (11%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLF-RTGASYIQPLSWTIRMKVALGAA 189
HPN++ L+G CL + L+V +M G L N + T ++ L + L A
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVA 143
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD--GPTGSQSHVSTRVMGTY 247
KG+ +L S K ++RD N +LD + K++DFGLA+D H T
Sbjct: 144 KGMKFLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 201
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRR 307
+ A E + T T KSDV+SFGV+L E+++ P + N + YL RR
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRR 255
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDT 359
+ Q +Y + + +KC + + RP+ E+V + I T
Sbjct: 256 LLQ-------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFST 297
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 34/292 (11%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 33 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 86
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLF-RTGASYIQPLSWTIRMKVALGAA 189
HPN++ L+G CL + L+V +M G L N + T ++ L + L A
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVA 141
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD--GPTGSQSHVSTRVMGTY 247
KG+ +L S K ++RD N +LD + K++DFGLA+D H T
Sbjct: 142 KGMKFLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 199
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRR 307
+ A E + T T KSDV+SFGV+L E+++ P + N + YL RR
Sbjct: 200 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRR 253
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDT 359
+ Q +Y + + +KC + + RP+ E+V + I T
Sbjct: 254 LLQ-------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFST 295
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 112/224 (50%), Gaps = 34/224 (15%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-------NQESLQGHLEWLTEIKHL 128
+G+GGFG V KG + + V+A+K L E ++ E+ E+ +
Sbjct: 27 IGKGGFGLVHKGRLVKDKS---------VVAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
L HPN+VKL Y L + +V EF+P G L + L P+ W++++++ L
Sbjct: 78 SNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDI 131
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLD-LNYN----AKLSDFGLAKDGPTGSQSHVSTRV 243
A G+ Y+ + +++RD ++ NI L L+ N AK++DF L++ H + +
Sbjct: 132 ALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGL 186
Query: 244 MGTYGYAAPEYMATGH--LTAKSDVYSFGVVLLEMLSGRRVIDK 285
+G + + APE + T K+D YSF ++L +L+G D+
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 34/292 (11%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 36 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 89
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLF-RTGASYIQPLSWTIRMKVALGAA 189
HPN++ L+G CL + L+V +M G L N + T ++ L + L A
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVA 144
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD--GPTGSQSHVSTRVMGTY 247
KG+ +L S K ++RD N +LD + K++DFGLA+D H T
Sbjct: 145 KGMKFLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPV 202
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRR 307
+ A E + T T KSDV+SFGV+L E+++ P + N + YL RR
Sbjct: 203 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRR 256
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDT 359
+ Q +Y + + +KC + + RP+ E+V + I T
Sbjct: 257 LLQ-------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFST 298
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 34/292 (11%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 36 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 89
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLF-RTGASYIQPLSWTIRMKVALGAA 189
HPN++ L+G CL + L+V +M G L N + T ++ L + L A
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVA 144
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD--GPTGSQSHVSTRVMGTY 247
KG+ +L S K ++RD N +LD + K++DFGLA+D H T
Sbjct: 145 KGMKFLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 202
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRR 307
+ A E + T T KSDV+SFGV+L E+++ P + N + YL RR
Sbjct: 203 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRR 256
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDT 359
+ Q +Y + + +KC + + RP+ E+V + I T
Sbjct: 257 LLQ-------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFST 298
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 133/290 (45%), Gaps = 46/290 (15%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
+G G FG V G W+++ +A+K + + ++ +++ E + + +L HP
Sbjct: 16 IGSGQFGLVHLGYWLNKDK-----------VAIKTIREGAMSEE-DFIEEAEVMMKLSHP 63
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAY 194
LV+L G CLE LV EFM G L ++L RT + + L +G+AY
Sbjct: 64 KLVQLYGVCLEQAPICLVTEFMEHGCLSDYL-RTQRGLFAA---ETLLGMCLDVCEGMAY 119
Query: 195 LHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEY 254
L ++A VI+RD N L+ N K+SDFG+ + Q ST +A+PE
Sbjct: 120 L--EEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEV 176
Query: 255 MATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSRE-----HNLIEWAKPYLQSKRRIF 309
+ ++KSDV+SFGV++ E+ S ++ +NR + E KP L S ++
Sbjct: 177 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAST-HVY 235
Query: 310 QVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDT 359
Q+M+ C P+ RP +++ L +I ++
Sbjct: 236 QIMN--------------------HCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 34/292 (11%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 40 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 93
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLF-RTGASYIQPLSWTIRMKVALGAA 189
HPN++ L+G CL + L+V +M G L N + T ++ L + L A
Sbjct: 94 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVA 148
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD--GPTGSQSHVSTRVMGTY 247
KG+ +L S K ++RD N +LD + K++DFGLA+D H T
Sbjct: 149 KGMKFLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 206
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRR 307
+ A E + T T KSDV+SFGV+L E+++ P + N + YL RR
Sbjct: 207 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRR 260
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDT 359
+ Q +Y + + +KC + + RP+ E+V + I T
Sbjct: 261 LLQ-------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFST 302
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 34/292 (11%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLF-RTGASYIQPLSWTIRMKVALGAA 189
HPN++ L+G CL + L+V +M G L N + T ++ L + L A
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVA 143
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD--GPTGSQSHVSTRVMGTY 247
KG+ +L S K ++RD N +LD + K++DFGLA+D H T
Sbjct: 144 KGMKFLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 201
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRR 307
+ A E + T T KSDV+SFGV+L E+++ P + N + YL RR
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFD-ITVYLLQGRR 255
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDT 359
+ Q +Y + + +KC + + RP+ E+V + I T
Sbjct: 256 LLQ-------PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFST 297
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 138/297 (46%), Gaps = 44/297 (14%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N D V+G G FG V G P++ + I ++ Q ++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRR-DFLGEASIM 100
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL-- 186
GQ HPN+++L G + ++V E+M GSL++ L + A + T+ V +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF------TVIQLVGMLR 154
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRV 243
G A G+ YL SD V +RD NIL++ N K+SDFGLA+ D P + + ++
Sbjct: 155 GIASGMKYL-SDMGYV-HRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKI 212
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKNRPSREHNLIEWAKPYL 302
+ +PE +A T+ SDV+S+G+VL E++S G R PY
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER------------------PYW 252
Query: 303 Q-SKRRIFQVMDA--RIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
+ S + + + +D R+ AAL L + C + RP +++V L+++
Sbjct: 253 EMSNQDVIKAVDEGYRLPPPMDCPAALYQ--LMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 132/282 (46%), Gaps = 34/282 (12%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 19 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 68
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L+G C + ++ EFM G+L ++L Q +S + + +A + + YL
Sbjct: 69 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR---QEVSAVVLLYMATQISSAMEYL 125
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +
Sbjct: 126 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESL 182
Query: 256 ATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDA 314
A + KSDV++FGV+L E+ + G PS+ + L+E D
Sbjct: 183 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE---------------KDY 227
Query: 315 RIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
R+E G K L C P RP+ E+ +A E +
Sbjct: 228 RMER--PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 106/227 (46%), Gaps = 32/227 (14%)
Query: 68 RNFRPDS-----VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL 122
R FRP VLG+G FG K E TG V+ +K L + + +L
Sbjct: 5 RIFRPSDLIHGEVLGKGCFGQAIKVTHRE---------TGEVMVMKELIRFDEETQRTFL 55
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRM 182
E+K + L HPN++K IG +D + E++ G+L + + Y W+ R+
Sbjct: 56 KEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQY----PWSQRV 111
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA------KDGPTGSQ 236
A A G+AYLHS +I+RD + N L+ N N ++DFGLA K P G +
Sbjct: 112 SFAKDIASGMAYLHS--MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLR 169
Query: 237 S------HVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEML 277
S V+G + APE + K DV+SFG+VL E++
Sbjct: 170 SLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 141/315 (44%), Gaps = 47/315 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 19 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 68
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L+G C + ++ EFM G+L ++L Q +S + + +A + + YL
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR---QEVSAVVLLYMATQISSAMEYL 125
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +
Sbjct: 126 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTAPESL 182
Query: 256 ATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDA 314
A + KSDV++FGV+L E+ + G PS+ + L+E D
Sbjct: 183 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE---------------KDY 227
Query: 315 RIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDTNDAGVSRDESLQNSD 374
R+E G K L C P RP+ E+ +A E + Q S
Sbjct: 228 RMER--PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM-------------FQESS 272
Query: 375 RSTYKRKGLNENGQG 389
S K L + G+G
Sbjct: 273 ISDEVEKELGKRGEG 287
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 131/277 (47%), Gaps = 37/277 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN-QESLQGHLEWLTEIKHLGQLYHP 134
+G+G FG VFKG ID T V+A+K ++ +E+ + EI L Q P
Sbjct: 15 IGKGSFGEVFKG-IDNRTQK--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAY 194
+ K G L+D ++ E++ GS + L G PL T + KGL Y
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG-----PLDETQIATILREILKGLDY 119
Query: 195 LHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEY 254
LHS+K I+RD K +N+LL + KL+DFG+A T +Q +T V GT + APE
Sbjct: 120 LHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKRNTFV-GTPFWMAPEV 175
Query: 255 MATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDA 314
+ +K+D++S G+ +E+ G + P + LI P
Sbjct: 176 IKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------P 222
Query: 315 RIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+EG YS LK V A CL+ EP FRPT E++K
Sbjct: 223 TLEGNYS--KPLKEFVEA--CLNKEPSFRPTAKELLK 255
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 131/277 (47%), Gaps = 37/277 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN-QESLQGHLEWLTEIKHLGQLYHP 134
+G+G FG VFKG ID T V+A+K ++ +E+ + EI L Q P
Sbjct: 35 IGKGSFGEVFKG-IDNRTQK--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 85
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAY 194
+ K G L+D ++ E++ GS + L G PL T + KGL Y
Sbjct: 86 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG-----PLDETQIATILREILKGLDY 139
Query: 195 LHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEY 254
LHS+K I+RD K +N+LL + KL+DFG+A T +Q +T V GT + APE
Sbjct: 140 LHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKRNTFV-GTPFWMAPEV 195
Query: 255 MATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDA 314
+ +K+D++S G+ +E+ G + P + LI P
Sbjct: 196 IKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------P 242
Query: 315 RIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+EG YS LK V A CL+ EP FRPT E++K
Sbjct: 243 TLEGNYS--KPLKEFVEA--CLNKEPSFRPTAKELLK 275
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 138/297 (46%), Gaps = 44/297 (14%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N D V+G G FG V G P++ + I ++ Q ++L E +
Sbjct: 17 NISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRR-DFLGEASIM 71
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL-- 186
GQ HPN+++L G + ++V E+M GSL++ L + A + T+ V +
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF------TVIQLVGMLR 125
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRV 243
G A G+ YL SD V +RD NIL++ N K+SDFGL++ D P + + ++
Sbjct: 126 GIASGMKYL-SDMGYV-HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 183
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKNRPSREHNLIEWAKPYL 302
+ +PE +A T+ SDV+S+G+VL E++S G R PY
Sbjct: 184 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER------------------PYW 223
Query: 303 Q-SKRRIFQVMDA--RIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
+ S + + + +D R+ AAL L + C + RP +++V L+++
Sbjct: 224 EMSNQDVIKAVDEGYRLPPPMDCPAALYQ--LMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 139/297 (46%), Gaps = 44/297 (14%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N D V+G G FG V G + P++ + I ++ Q ++L E +
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLK----LPSKKEISVAIKTLKVGYTEKQRR-DFLGEASIM 98
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL-- 186
GQ HPN+++L G + ++V E+M GSL++ L + A + T+ V +
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF------TVIQLVGMLR 152
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRV 243
G A G+ YL SD V +RD NIL++ N K+SDFGL++ D P + + ++
Sbjct: 153 GIASGMKYL-SDMGYV-HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 210
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKNRPSREHNLIEWAKPYL 302
+ +PE +A T+ SDV+S+G+VL E++S G R PY
Sbjct: 211 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER------------------PYW 250
Query: 303 Q-SKRRIFQVMDA--RIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
+ S + + + +D R+ AAL L + C + RP +++V L+++
Sbjct: 251 EMSNQDVIKAVDEGYRLPPPMDCPAALYQ--LMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 138/297 (46%), Gaps = 44/297 (14%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N D V+G G FG V G P++ + I ++ Q ++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRR-DFLGEASIM 100
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL-- 186
GQ HPN+++L G + ++V E+M GSL++ L + A + T+ V +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF------TVIQLVGMLR 154
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRV 243
G A G+ YL SD ++RD NIL++ N K+SDFGL++ D P + + ++
Sbjct: 155 GIASGMKYL-SDMG-FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKNRPSREHNLIEWAKPYL 302
+ +PE +A T+ SDV+S+G+VL E++S G R PY
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER------------------PYW 252
Query: 303 Q-SKRRIFQVMDA--RIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
+ S + + + +D R+ AAL L + C + RP +++V L+++
Sbjct: 253 EMSNQDVIKAVDEGYRLPPPMDCPAALYQ--LMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 138/297 (46%), Gaps = 44/297 (14%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N D V+G G FG V G P++ + I ++ Q ++L E +
Sbjct: 34 NISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRR-DFLGEASIM 88
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL-- 186
GQ HPN+++L G + ++V E+M GSL++ L + A + T+ V +
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF------TVIQLVGMLR 142
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRV 243
G A G+ YL SD V +RD NIL++ N K+SDFGL++ D P + + ++
Sbjct: 143 GIASGMKYL-SDMGYV-HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 200
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKNRPSREHNLIEWAKPYL 302
+ +PE +A T+ SDV+S+G+VL E++S G R PY
Sbjct: 201 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER------------------PYW 240
Query: 303 Q-SKRRIFQVMDA--RIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
+ S + + + +D R+ AAL L + C + RP +++V L+++
Sbjct: 241 EMSNQDVIKAVDEGYRLPPPMDCPAALYQ--LMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 17/214 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LGEG FG VF + + +P + M++AVK L +L ++ E + L L H +
Sbjct: 23 LGEGAFGKVFLA--ECYNLSPTK--DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYI-----QP------LSWTIRMKV 184
+VK G C + D ++V+E+M G L L G + QP L + + +
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 244
A A G+ YL S ++RD T N L+ N K+ DFG+++D + V M
Sbjct: 139 ASQIASGMVYLASQH--FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 245 GTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ PE + T +SDV+SFGV+L E+ +
Sbjct: 197 LPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 127/277 (45%), Gaps = 37/277 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN-QESLQGHLEWLTEIKHLGQLYHP 134
+G+G FG VFKG ID T V+A+K ++ +E+ + EI L Q P
Sbjct: 30 IGKGSFGEVFKG-IDNRTQK--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 80
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAY 194
+ K G L+D ++ E++ GS + L G PL T + KGL Y
Sbjct: 81 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG-----PLDETQIATILREILKGLDY 134
Query: 195 LHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEY 254
LHS+K I+RD K +N+LL + KL+DFG+A G +GT + APE
Sbjct: 135 LHSEKK--IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEV 190
Query: 255 MATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDA 314
+ +K+D++S G+ +E+ G + P + LI P
Sbjct: 191 IKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------P 237
Query: 315 RIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+EG YS LK V A CL+ EP FRPT E++K
Sbjct: 238 TLEGNYS--KPLKEFVEA--CLNKEPSFRPTAKELLK 270
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 138/297 (46%), Gaps = 44/297 (14%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N D V+G G FG V G P++ + I ++ Q ++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRR-DFLGEASIM 100
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL-- 186
GQ HPN+++L G + ++V E+M GSL++ L + A + T+ V +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF------TVIQLVGMLR 154
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRV 243
G A G+ YL SD V +RD NIL++ N K+SDFGL++ D P + + ++
Sbjct: 155 GIASGMKYL-SDMGYV-HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKNRPSREHNLIEWAKPYL 302
+ +PE +A T+ SDV+S+G+VL E++S G R PY
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER------------------PYW 252
Query: 303 Q-SKRRIFQVMDA--RIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
+ S + + + +D R+ AAL L + C + RP +++V L+++
Sbjct: 253 EMSNQDVIKAVDEGYRLPPPMDCPAALYQ--LMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 139/297 (46%), Gaps = 44/297 (14%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N D V+G G FG V G + P++ + I ++ Q ++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLK----LPSKKEISVAIKTLKVGYTEKQRR-DFLGEASIM 100
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL-- 186
GQ HPN+++L G + ++V E+M GSL++ L + A + T+ V +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF------TVIQLVGMLR 154
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRV 243
G A G+ YL SD V +RD NIL++ N K+SDFGL++ D P + + ++
Sbjct: 155 GIASGMKYL-SDMGYV-HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKNRPSREHNLIEWAKPYL 302
+ +PE +A T+ SDV+S+G+VL E++S G R PY
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER------------------PYW 252
Query: 303 Q-SKRRIFQVMDA--RIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
+ S + + + +D R+ AAL L + C + RP +++V L+++
Sbjct: 253 EMSNQDVIKAVDEGYRLPPPMDCPAALYQ--LMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 139/297 (46%), Gaps = 44/297 (14%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N D V+G G FG V G + P++ + I ++ Q ++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLK----LPSKKEISVAIKTLKVGYTEKQRR-DFLGEASIM 100
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL-- 186
GQ HPN+++L G + ++V E+M GSL++ L + A + T+ V +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF------TVIQLVGMLR 154
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRV 243
G A G+ YL SD V +RD NIL++ N K+SDFGL++ D P + + ++
Sbjct: 155 GIASGMKYL-SDMGYV-HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKNRPSREHNLIEWAKPYL 302
+ +PE +A T+ SDV+S+G+VL E++S G R PY
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER------------------PYW 252
Query: 303 Q-SKRRIFQVMDA--RIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
+ S + + + +D R+ AAL L + C + RP +++V L+++
Sbjct: 253 EMSNQDVIKAVDEGYRLPPPMDCPAALYQ--LMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 139/297 (46%), Gaps = 44/297 (14%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N D V+G G FG V G + P++ + I ++ Q ++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLK----LPSKKEISVAIKTLKVGYTEKQRR-DFLGEASIM 100
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL-- 186
GQ HPN+++L G + ++V E+M GSL++ L + A + T+ V +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF------TVIQLVGMLR 154
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRV 243
G A G+ YL SD V +RD NIL++ N K+SDFGL++ D P + + ++
Sbjct: 155 GIASGMKYL-SDMGYV-HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKNRPSREHNLIEWAKPYL 302
+ +PE +A T+ SDV+S+G+VL E++S G R PY
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER------------------PYW 252
Query: 303 Q-SKRRIFQVMDA--RIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
+ S + + + +D R+ AAL L + C + RP +++V L+++
Sbjct: 253 EMSNQDVIKAVDEGYRLPPPMDCPAALYQ--LMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 127/277 (45%), Gaps = 37/277 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN-QESLQGHLEWLTEIKHLGQLYHP 134
+G+G FG VFKG ID T V+A+K ++ +E+ + EI L Q P
Sbjct: 15 IGKGSFGEVFKG-IDNRTQK--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAY 194
+ K G L+D ++ E++ GS + L G PL T + KGL Y
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG-----PLDETQIATILREILKGLDY 119
Query: 195 LHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEY 254
LHS+K I+RD K +N+LL + KL+DFG+A G +GT + APE
Sbjct: 120 LHSEKK--IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEV 175
Query: 255 MATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDA 314
+ +K+D++S G+ +E+ G + P + LI P
Sbjct: 176 IKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------P 222
Query: 315 RIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+EG YS LK V A CL+ EP FRPT E++K
Sbjct: 223 TLEGNYS--KPLKEFVEA--CLNKEPSFRPTAKELLK 255
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 137/297 (46%), Gaps = 44/297 (14%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N D V+G G FG V G P++ + I ++ Q ++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRR-DFLGEASIM 100
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL-- 186
GQ HPN+++L G + ++V E+M GSL++ L + A + T+ V +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF------TVIQLVGMLR 154
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRV 243
G A G+ YL SD V +RD NIL++ N K+SDFGL + D P + + ++
Sbjct: 155 GIASGMKYL-SDMGYV-HRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKI 212
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKNRPSREHNLIEWAKPYL 302
+ +PE +A T+ SDV+S+G+VL E++S G R PY
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER------------------PYW 252
Query: 303 Q-SKRRIFQVMDA--RIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
+ S + + + +D R+ AAL L + C + RP +++V L+++
Sbjct: 253 EMSNQDVIKAVDEGYRLPPPMDCPAALYQ--LMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 137/297 (46%), Gaps = 44/297 (14%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N D V+G G FG V G P++ + I ++ Q ++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRR-DFLGEASIM 100
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL-- 186
GQ HPN+++L G + ++V E M GSL++ L + A + T+ V +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQF------TVIQLVGMLR 154
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRV 243
G A G+ YL SD V +RD NIL++ N K+SDFGL++ D P + + ++
Sbjct: 155 GIASGMKYL-SDMGAV-HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKNRPSREHNLIEWAKPYL 302
+ +PE +A T+ SDV+S+G+VL E++S G R PY
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER------------------PYW 252
Query: 303 Q-SKRRIFQVMDA--RIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
+ S + + + +D R+ AAL L + C + RP +++V L+++
Sbjct: 253 EMSNQDVIKAVDEGYRLPPPMDCPAALYQ--LMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 137/297 (46%), Gaps = 44/297 (14%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N D V+G G FG V G P++ + I ++ Q ++L E +
Sbjct: 17 NISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQRR-DFLGEASIM 71
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL-- 186
GQ HPN+++L G + ++V E M GSL++ L + A + T+ V +
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQF------TVIQLVGMLR 125
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRV 243
G A G+ YL SD V +RD NIL++ N K+SDFGL++ D P + + ++
Sbjct: 126 GIASGMKYL-SDMGYV-HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 183
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKNRPSREHNLIEWAKPYL 302
+ +PE +A T+ SDV+S+G+VL E++S G R PY
Sbjct: 184 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER------------------PYW 223
Query: 303 Q-SKRRIFQVMDA--RIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
+ S + + + +D R+ AAL L + C + RP +++V L+++
Sbjct: 224 EMSNQDVIKAVDEGYRLPPPMDCPAALYQ--LMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 138/297 (46%), Gaps = 44/297 (14%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N D V+G G FG V G + P++ + I ++ Q ++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLK----LPSKKEISVAIKTLKVGYTEKQRR-DFLGEASIM 100
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL-- 186
GQ HPN+++L G + ++V E M GSL++ L + A + T+ V +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQF------TVIQLVGMLR 154
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRV 243
G A G+ YL SD V +RD NIL++ N K+SDFGL++ D P + + ++
Sbjct: 155 GIASGMKYL-SDMGYV-HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKNRPSREHNLIEWAKPYL 302
+ +PE +A T+ SDV+S+G+VL E++S G R PY
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER------------------PYW 252
Query: 303 Q-SKRRIFQVMDA--RIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
+ S + + + +D R+ AAL L + C + RP +++V L+++
Sbjct: 253 EMSNQDVIKAVDEGYRLPPPMDCPAALYQ--LMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LGEG FG VF Y +++AVK L S ++ E + L L H +
Sbjct: 21 LGEGAFGKVFLA----ECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYI--------QPLSWTIRMKVALG 187
+VK G C+E D ++V+E+M G L L G + L+ + + +A
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 188 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 247
A G+ YL S ++RD T N L+ N K+ DFG+++D + V M
Sbjct: 137 IAAGMVYLASQH--FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ PE + T +SDV+S GVVL E+ +
Sbjct: 195 RWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 19/249 (7%)
Query: 43 PRTEGEILLGSNI------KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYA 95
P TE GSN K+ S + LK R N LG G FG V++G +
Sbjct: 13 PTTENLYFQGSNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPND 72
Query: 96 PARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYE 154
P + + +AVK L + S Q L++L E + +L H N+V+ IG L+ R ++ E
Sbjct: 73 P----SPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLE 128
Query: 155 FMPKGSLENHLFRTGASYIQPLSWTIR--MKVALGAAKGLAYLHSDKAKVIYRDFKTSNI 212
M G L++ L T QP S + + VA A G YL + I+RD N
Sbjct: 129 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNC 186
Query: 213 LLDL---NYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSF 269
LL AK+ DFG+A+D S M + PE G T+K+D +SF
Sbjct: 187 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 246
Query: 270 GVVLLEMLS 278
GV+L E+ S
Sbjct: 247 GVLLWEIFS 255
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LGEG FG VF + H P + M++AVK L + S ++ E + L L H +
Sbjct: 20 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG--ASYIQ--------PLSWTIRMKVA 185
+V+ G C E L+V+E+M G L L G A + PL + VA
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 245
A G+ YL ++RD T N L+ K+ DFG+++D + V R M
Sbjct: 136 SQVAAGMVYLAG--LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 246 TYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ PE + T +SDV+SFGVVL E+ +
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LGEG FG VF + H P + M++AVK L + S ++ E + L L H +
Sbjct: 49 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 104
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG--ASYIQ--------PLSWTIRMKVA 185
+V+ G C E L+V+E+M G L L G A + PL + VA
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 245
A G+ YL ++RD T N L+ K+ DFG+++D + V R M
Sbjct: 165 SQVAAGMVYLAG--LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 246 TYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ PE + T +SDV+SFGVVL E+ +
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LGEG FG VF + H P + M++AVK L + S ++ E + L L H +
Sbjct: 26 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG--ASYIQ--------PLSWTIRMKVA 185
+V+ G C E L+V+E+M G L L G A + PL + VA
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 245
A G+ YL ++RD T N L+ K+ DFG+++D + V R M
Sbjct: 142 SQVAAGMVYLAG--LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 246 TYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ PE + T +SDV+SFGVVL E+ +
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 127/277 (45%), Gaps = 37/277 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN-QESLQGHLEWLTEIKHLGQLYHP 134
+G+G FG V+KG ID HT V+A+K ++ +E+ + EI L Q P
Sbjct: 27 IGKGSFGEVYKG-IDNHTKE--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 77
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAY 194
+ + G L+ ++ E++ GS + L + G PL T + KGL Y
Sbjct: 78 YITRYFGSYLKSTKLWIIMEYLGGGSALD-LLKPG-----PLEETYIATILREILKGLDY 131
Query: 195 LHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEY 254
LHS++ I+RD K +N+LL + KL+DFG+A G +GT + APE
Sbjct: 132 LHSERK--IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEV 187
Query: 255 MATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDA 314
+ K+D++S G+ +E+ G P R LI P
Sbjct: 188 IKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP-------------P 234
Query: 315 RIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+EGQ+S K V A CL+ +P+FRPT E++K
Sbjct: 235 TLEGQHS--KPFKEFVEA--CLNKDPRFRPTAKELLK 267
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 139/322 (43%), Gaps = 55/322 (17%)
Query: 55 IKSFSFNGLKTATRNF---------RPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVI 105
I F+F A R F + + V+G G FG V G H P + + +
Sbjct: 11 IDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSG----HLKLPGK--REIFV 64
Query: 106 AVKRLNQ-ESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENH 164
A+K L + + ++L+E +GQ HPN++ L G + +++ EFM GSL++
Sbjct: 65 AIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSF 124
Query: 165 LFRTGASYIQPLSWTIRMKVAL--GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKL 222
L + + T+ V + G A G+ YL ++RD NIL++ N K+
Sbjct: 125 LRQNDGQF------TVIQLVGMLRGIAAGMKYLAD--MNYVHRDLAARNILVNSNLVCKV 176
Query: 223 SDFGLAKDGPTGSQSHVSTRVMG---TYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS- 278
SDFGL++ + T +G + APE + T+ SDV+S+G+V+ E++S
Sbjct: 177 SDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSY 236
Query: 279 GRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAV----LAIK 334
G R PY + V++A IE Y L + L +
Sbjct: 237 GER------------------PYWDMTNQ--DVINA-IEQDYRLPPPMDCPSALHQLMLD 275
Query: 335 CLSNEPKFRPTMDEVVKALEQI 356
C + RP ++V L+++
Sbjct: 276 CWQKDRNHRPKFGQIVNTLDKM 297
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 132/285 (46%), Gaps = 40/285 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 75
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L+G C + ++ EFM G+L ++L Q +S + + +A + + YL
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR---QEVSAVVLLYMATQISSAMEYL 132
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +
Sbjct: 133 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESL 189
Query: 256 ATGHLTAKSDVYSFGVVLLEM----LSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQV 311
A + KSDV++FGV+L E+ +S ID + +++++
Sbjct: 190 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------------QVYEL 229
Query: 312 MDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
++ + G K L C P RP+ E+ +A E +
Sbjct: 230 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 40/285 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 228 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 277
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L+G C + ++ EFM G+L ++L Q +S + + +A + + YL
Sbjct: 278 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR---QEVSAVVLLYMATQISSAMEYL 334
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
+K I+R+ N L+ N+ K++DFGL++ TG + APE +
Sbjct: 335 --EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESL 391
Query: 256 ATGHLTAKSDVYSFGVVLLEM----LSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQV 311
A + KSDV++FGV+L E+ +S ID + +++++
Sbjct: 392 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------------QVYEL 431
Query: 312 MDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
++ + G K L C P RP+ E+ +A E +
Sbjct: 432 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 132/285 (46%), Gaps = 40/285 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 70
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L+G C + ++ EFM G+L ++L Q +S + + +A + + YL
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR---QEVSAVVLLYMATQISSAMEYL 127
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +
Sbjct: 128 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESL 184
Query: 256 ATGHLTAKSDVYSFGVVLLEM----LSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQV 311
A + KSDV++FGV+L E+ +S ID + +++++
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------------QVYEL 224
Query: 312 MDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
++ + G K L C P RP+ E+ +A E +
Sbjct: 225 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 132/285 (46%), Gaps = 40/285 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 70
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L+G C + ++ EFM G+L ++L Q +S + + +A + + YL
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR---QEVSAVVLLYMATQISSAMEYL 127
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +
Sbjct: 128 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESL 184
Query: 256 ATGHLTAKSDVYSFGVVLLEM----LSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQV 311
A + KSDV++FGV+L E+ +S ID + +++++
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------------QVYEL 224
Query: 312 MDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
++ + G K L C P RP+ E+ +A E +
Sbjct: 225 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 132/285 (46%), Gaps = 40/285 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 70
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L+G C + ++ EFM G+L ++L Q +S + + +A + + YL
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR---QEVSAVVLLYMATQISSAMEYL 127
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +
Sbjct: 128 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESL 184
Query: 256 ATGHLTAKSDVYSFGVVLLEM----LSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQV 311
A + KSDV++FGV+L E+ +S ID + +++++
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------------QVYEL 224
Query: 312 MDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
++ + G K L C P RP+ E+ +A E +
Sbjct: 225 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 132/285 (46%), Gaps = 40/285 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 70
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L+G C + ++ EFM G+L ++L Q +S + + +A + + YL
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR---QEVSAVVLLYMATQISSAMEYL 127
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +
Sbjct: 128 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESL 184
Query: 256 ATGHLTAKSDVYSFGVVLLEM----LSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQV 311
A + KSDV++FGV+L E+ +S ID + +++++
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------------QVYEL 224
Query: 312 MDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
++ + G K L C P RP+ E+ +A E +
Sbjct: 225 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 112/249 (44%), Gaps = 19/249 (7%)
Query: 43 PRTEGEILLGSNI------KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYA 95
P TE GSN K+ S + LK R N LG G FG V++G +
Sbjct: 13 PTTENLYFQGSNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPND 72
Query: 96 PARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYE 154
P + + +AVK L + S Q L++L E + + H N+V+ IG L+ R ++ E
Sbjct: 73 P----SPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILME 128
Query: 155 FMPKGSLENHLFRTGASYIQPLSWTIR--MKVALGAAKGLAYLHSDKAKVIYRDFKTSNI 212
M G L++ L T QP S + + VA A G YL + I+RD N
Sbjct: 129 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNC 186
Query: 213 LLDL---NYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSF 269
LL AK+ DFG+A+D S M + PE G T+K+D +SF
Sbjct: 187 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 246
Query: 270 GVVLLEMLS 278
GV+L E+ S
Sbjct: 247 GVLLWEIFS 255
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 107/230 (46%), Gaps = 13/230 (5%)
Query: 56 KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE- 113
K+ S + LK R N LG G FG V++G + P + + +AVK L +
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVC 73
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYI 173
S Q L++L E + +L H N+V+ IG L+ R ++ E M G L++ L T
Sbjct: 74 SEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 174 QPLSWTIR--MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL---NYNAKLSDFGLA 228
QP S + + VA A G YL + I+RD N LL AK+ DFG+A
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
Query: 229 KDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+D S M + PE G T+K+D +SFGV+L E+ S
Sbjct: 192 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 40/285 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 22 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 71
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L+G C + ++ EFM G+L ++L Q ++ + + +A + + YL
Sbjct: 72 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR---QEVNAVVLLYMATQISSAMEYL 128
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +
Sbjct: 129 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESL 185
Query: 256 ATGHLTAKSDVYSFGVVLLEM----LSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQV 311
A + KSDV++FGV+L E+ +S ID + +++++
Sbjct: 186 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------------QVYEL 225
Query: 312 MDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
++ + G K L C P RP+ E+ +A E +
Sbjct: 226 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 112/249 (44%), Gaps = 19/249 (7%)
Query: 43 PRTEGEILLGSNI------KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYA 95
P TE GSN K+ S + LK R N LG G FG V++G +
Sbjct: 13 PTTENLYFQGSNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPND 72
Query: 96 PARPGTGMVIAVKRLNQ-ESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYE 154
P + + +AVK L + S Q L++L E + + H N+V+ IG L+ R ++ E
Sbjct: 73 P----SPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLE 128
Query: 155 FMPKGSLENHLFRTGASYIQPLSWTIR--MKVALGAAKGLAYLHSDKAKVIYRDFKTSNI 212
M G L++ L T QP S + + VA A G YL + I+RD N
Sbjct: 129 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNC 186
Query: 213 LLDL---NYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSF 269
LL AK+ DFG+A+D S M + PE G T+K+D +SF
Sbjct: 187 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 246
Query: 270 GVVLLEMLS 278
GV+L E+ S
Sbjct: 247 GVLLWEIFS 255
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 135/292 (46%), Gaps = 54/292 (18%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 22 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 71
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L+G C + ++ EFM G+L ++L Q ++ + + +A + + YL
Sbjct: 72 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR---QEVNAVVLLYMATQISSAMEYL 128
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-------DGPTGSQSHVSTRVMGTYG 248
+K I+RD N L+ N+ K++DFGL++ P G++ +
Sbjct: 129 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK-------- 178
Query: 249 YAAPEYMATGHLTAKSDVYSFGVVLLEM----LSGRRVIDKNRPSREHNLIEWAKPYLQS 304
+ APE +A + KSDV++FGV+L E+ +S ID +
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS------------------ 220
Query: 305 KRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
+++++++ + G K L C P RP+ E+ +A E +
Sbjct: 221 --QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 132/285 (46%), Gaps = 40/285 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 267 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 316
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L+G C + ++ EFM G+L ++L Q ++ + + +A + + YL
Sbjct: 317 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR---QEVNAVVLLYMATQISSAMEYL 373
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
+K I+R+ N L+ N+ K++DFGL++ TG + APE +
Sbjct: 374 --EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESL 430
Query: 256 ATGHLTAKSDVYSFGVVLLEM----LSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQV 311
A + KSDV++FGV+L E+ +S ID + +++++
Sbjct: 431 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------------QVYEL 470
Query: 312 MDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
++ + G K L C P RP+ E+ +A E +
Sbjct: 471 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 515
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 109/219 (49%), Gaps = 29/219 (13%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ-ESLQGHLEWLTEIKHLGQL-Y 132
V+GEG FG V K I + G M A+KR+ + S H ++ E++ L +L +
Sbjct: 22 VIGEGNFGQVLKARI-------KKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL-----------FRTGASYIQPLSWTIR 181
HPN++ L+G C + L E+ P G+L + L F S LS
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 182 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 241
+ A A+G+ YL + + I+RD NIL+ NY AK++DFGL++ G + +V
Sbjct: 135 LHFAADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK- 187
Query: 242 RVMGTYG--YAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ MG + A E + T SDV+S+GV+L E++S
Sbjct: 188 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 40/285 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 75
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L+G C + ++ EFM G+L ++L Q ++ + + +A + + YL
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR---QEVNAVVLLYMATQISSAMEYL 132
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +
Sbjct: 133 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESL 189
Query: 256 ATGHLTAKSDVYSFGVVLLEM----LSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQV 311
A + KSDV++FGV+L E+ +S ID + +++++
Sbjct: 190 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------------QVYEL 229
Query: 312 MDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
++ + G K L C P RP+ E+ +A E +
Sbjct: 230 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 135/292 (46%), Gaps = 54/292 (18%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 23 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 72
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L+G C + ++ EFM G+L ++L Q ++ + + +A + + YL
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR---QEVNAVVLLYMATQISSAMEYL 129
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-------DGPTGSQSHVSTRVMGTYG 248
+K I+RD N L+ N+ K++DFGL++ P G++ +
Sbjct: 130 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK-------- 179
Query: 249 YAAPEYMATGHLTAKSDVYSFGVVLLEM----LSGRRVIDKNRPSREHNLIEWAKPYLQS 304
+ APE +A + KSDV++FGV+L E+ +S ID +
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS------------------ 221
Query: 305 KRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
+++++++ + G K L C P RP+ E+ +A E +
Sbjct: 222 --QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 109/219 (49%), Gaps = 29/219 (13%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ-ESLQGHLEWLTEIKHLGQL-Y 132
V+GEG FG V K I + G M A+KR+ + S H ++ E++ L +L +
Sbjct: 32 VIGEGNFGQVLKARI-------KKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL-----------FRTGASYIQPLSWTIR 181
HPN++ L+G C + L E+ P G+L + L F S LS
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 182 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 241
+ A A+G+ YL + + I+RD NIL+ NY AK++DFGL++ G + +V
Sbjct: 145 LHFAADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK- 197
Query: 242 RVMGTYG--YAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ MG + A E + T SDV+S+GV+L E++S
Sbjct: 198 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 40/285 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 75
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L+G C + ++ EFM G+L ++L Q ++ + + +A + + YL
Sbjct: 76 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR---QEVNAVVLLYMATQISSAMEYL 132
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +
Sbjct: 133 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESL 189
Query: 256 ATGHLTAKSDVYSFGVVLLEM----LSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQV 311
A + KSDV++FGV+L E+ +S ID + +++++
Sbjct: 190 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------------QVYEL 229
Query: 312 MDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
++ + G K L C P RP+ E+ +A E +
Sbjct: 230 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 129/293 (44%), Gaps = 42/293 (14%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
+ V+G G FG V +G AP + + + I + Q E+L+E +GQ
Sbjct: 21 EEVIGAGEFGEVCRG----RLKAPGKKESCVAIKTLKGGYTERQRR-EFLSEASIMGQFE 75
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL-FRTGASYIQPLSWTIRMKVALGAAKG 191
HPN+++L G +++ EFM G+L++ L G + L +R G A G
Sbjct: 76 HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR-----GIASG 130
Query: 192 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG---TYG 248
+ YL + ++RD NIL++ N K+SDFGL++ S T +G
Sbjct: 131 MRYLA--EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIR 188
Query: 249 YAAPEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKNRPSREHNLIEWAKPYLQSKRR 307
+ APE +A T+ SD +S+G+V+ E++S G R PY +
Sbjct: 189 WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGER------------------PYWDMSNQ 230
Query: 308 IFQVMDARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALEQI 356
V++A IE Y L L + C + RP +VV AL+++
Sbjct: 231 --DVINA-IEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 40/285 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 75
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L+G C + ++ EFM G+L ++L Q ++ + + +A + + YL
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR---QEVNAVVLLYMATQISSAMEYL 132
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +
Sbjct: 133 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESL 189
Query: 256 ATGHLTAKSDVYSFGVVLLEM----LSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQV 311
A + KSDV++FGV+L E+ +S ID + +++++
Sbjct: 190 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------------QVYEL 229
Query: 312 MDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
++ + G K L C P RP+ E+ +A E +
Sbjct: 230 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 132/285 (46%), Gaps = 40/285 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 225 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 274
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L+G C + ++ EFM G+L ++L Q ++ + + +A + + YL
Sbjct: 275 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR---QEVNAVVLLYMATQISSAMEYL 331
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
+K I+R+ N L+ N+ K++DFGL++ TG + APE +
Sbjct: 332 --EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESL 388
Query: 256 ATGHLTAKSDVYSFGVVLLEM----LSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQV 311
A + KSDV++FGV+L E+ +S ID + +++++
Sbjct: 389 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------------QVYEL 428
Query: 312 MDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
++ + G K L C P RP+ E+ +A E +
Sbjct: 429 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 473
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 40/285 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 75
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L+G C + ++ EFM G+L ++L Q ++ + + +A + + YL
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR---QEVNAVVLLYMATQISSAMEYL 132
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +
Sbjct: 133 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESL 189
Query: 256 ATGHLTAKSDVYSFGVVLLEM----LSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQV 311
A + KSDV++FGV+L E+ +S ID + +++++
Sbjct: 190 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------------QVYEL 229
Query: 312 MDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
++ + G K L C P RP+ E+ +A E +
Sbjct: 230 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 40/285 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 25 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 74
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L+G C + ++ EFM G+L ++L Q ++ + + +A + + YL
Sbjct: 75 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR---QEVNAVVLLYMATQISSAMEYL 131
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +
Sbjct: 132 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESL 188
Query: 256 ATGHLTAKSDVYSFGVVLLEM----LSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQV 311
A + KSDV++FGV+L E+ +S ID + +++++
Sbjct: 189 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------------QVYEL 228
Query: 312 MDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
++ + G K L C P RP+ E+ +A E +
Sbjct: 229 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 106/230 (46%), Gaps = 13/230 (5%)
Query: 56 KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE- 113
K+ S + LK R N LG G FG V++G + P + + +AVK L +
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVC 73
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYI 173
S Q L++L E + + H N+V+ IG L+ R ++ E M G L++ L T
Sbjct: 74 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 174 QPLSWTIR--MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL---NYNAKLSDFGLA 228
QP S + + VA A G YL + I+RD N LL AK+ DFG+A
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
Query: 229 KDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+D S M + PE G T+K+D +SFGV+L E+ S
Sbjct: 192 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 106/230 (46%), Gaps = 13/230 (5%)
Query: 56 KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE- 113
K+ S + LK R N LG G FG V++G + P + + +AVK L +
Sbjct: 34 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVC 89
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYI 173
S Q L++L E + + H N+V+ IG L+ R ++ E M G L++ L T
Sbjct: 90 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 149
Query: 174 QPLSWTIR--MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL---NYNAKLSDFGLA 228
QP S + + VA A G YL + I+RD N LL AK+ DFG+A
Sbjct: 150 QPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 207
Query: 229 KDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+D S M + PE G T+K+D +SFGV+L E+ S
Sbjct: 208 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 40/285 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 23 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 72
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L+G C + ++ EFM G+L ++L Q ++ + + +A + + YL
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR---QEVNAVVLLYMATQISSAMEYL 129
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +
Sbjct: 130 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESL 186
Query: 256 ATGHLTAKSDVYSFGVVLLEM----LSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQV 311
A + KSDV++FGV+L E+ +S ID + +++++
Sbjct: 187 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------------QVYEL 226
Query: 312 MDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
++ + G K L C P RP+ E+ +A E +
Sbjct: 227 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 40/285 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 23 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 72
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L+G C + ++ EFM G+L ++L Q ++ + + +A + + YL
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR---QEVNAVVLLYMATQISSAMEYL 129
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +
Sbjct: 130 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESL 186
Query: 256 ATGHLTAKSDVYSFGVVLLEM----LSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQV 311
A + KSDV++FGV+L E+ +S ID + +++++
Sbjct: 187 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------------QVYEL 226
Query: 312 MDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
++ + G K L C P RP+ E+ +A E +
Sbjct: 227 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 106/230 (46%), Gaps = 13/230 (5%)
Query: 56 KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE- 113
K+ S + LK R N LG G FG V++G + P + + +AVK L +
Sbjct: 44 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVC 99
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYI 173
S Q L++L E + + H N+V+ IG L+ R ++ E M G L++ L T
Sbjct: 100 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 159
Query: 174 QPLSWTIR--MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL---NYNAKLSDFGLA 228
QP S + + VA A G YL + I+RD N LL AK+ DFG+A
Sbjct: 160 QPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 217
Query: 229 KDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+D S M + PE G T+K+D +SFGV+L E+ S
Sbjct: 218 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 40/285 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 34 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 83
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L+G C + ++ EFM G+L ++L Q ++ + + +A + + YL
Sbjct: 84 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR---QEVNAVVLLYMATQISSAMEYL 140
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +
Sbjct: 141 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESL 197
Query: 256 ATGHLTAKSDVYSFGVVLLEM----LSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQV 311
A + KSDV++FGV+L E+ +S ID + +++++
Sbjct: 198 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------------QVYEL 237
Query: 312 MDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
++ + G K L C P RP+ E+ +A E +
Sbjct: 238 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 282
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 40/285 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 70
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L+G C + ++ EFM G+L ++L Q ++ + + +A + + YL
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR---QEVNAVVLLYMATQISSAMEYL 127
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +
Sbjct: 128 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESL 184
Query: 256 ATGHLTAKSDVYSFGVVLLEM----LSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQV 311
A + KSDV++FGV+L E+ +S ID + +++++
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------------QVYEL 224
Query: 312 MDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
++ + G K L C P RP+ E+ +A E +
Sbjct: 225 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 106/230 (46%), Gaps = 13/230 (5%)
Query: 56 KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE- 113
K+ S + LK R N LG G FG V++G + P + + +AVK L +
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVC 72
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYI 173
S Q L++L E + + H N+V+ IG L+ R ++ E M G L++ L T
Sbjct: 73 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPS 132
Query: 174 QPLSWTIR--MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL---NYNAKLSDFGLA 228
QP S + + VA A G YL + I+RD N LL AK+ DFG+A
Sbjct: 133 QPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190
Query: 229 KDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+D S M + PE G T+K+D +SFGV+L E+ S
Sbjct: 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 106/230 (46%), Gaps = 13/230 (5%)
Query: 56 KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE- 113
K+ S + LK R N LG G FG V++G + P + + +AVK L +
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVC 72
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYI 173
S Q L++L E + + H N+V+ IG L+ R ++ E M G L++ L T
Sbjct: 73 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 132
Query: 174 QPLSWTIR--MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL---NYNAKLSDFGLA 228
QP S + + VA A G YL + I+RD N LL AK+ DFG+A
Sbjct: 133 QPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190
Query: 229 KDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+D S M + PE G T+K+D +SFGV+L E+ S
Sbjct: 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 106/230 (46%), Gaps = 13/230 (5%)
Query: 56 KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE- 113
K+ S + LK R N LG G FG V++G + P + + +AVK L +
Sbjct: 24 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVC 79
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYI 173
S Q L++L E + + H N+V+ IG L+ R ++ E M G L++ L T
Sbjct: 80 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 139
Query: 174 QPLSWTIR--MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL---NYNAKLSDFGLA 228
QP S + + VA A G YL + I+RD N LL AK+ DFG+A
Sbjct: 140 QPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 197
Query: 229 KDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+D S M + PE G T+K+D +SFGV+L E+ S
Sbjct: 198 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 40/285 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 70
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L+G C + ++ EFM G+L ++L Q ++ + + +A + + YL
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR---QEVNAVVLLYMATQISSAMEYL 127
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +
Sbjct: 128 --EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESL 184
Query: 256 ATGHLTAKSDVYSFGVVLLEM----LSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQV 311
A + KSDV++FGV+L E+ +S ID + +++++
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------------QVYEL 224
Query: 312 MDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
++ + G K L C P RP+ E+ +A E +
Sbjct: 225 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 106/230 (46%), Gaps = 13/230 (5%)
Query: 56 KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE- 113
K+ S + LK R N LG G FG V++G + P + + +AVK L +
Sbjct: 9 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVC 64
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYI 173
S Q L++L E + + H N+V+ IG L+ R ++ E M G L++ L T
Sbjct: 65 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 124
Query: 174 QPLSWTIR--MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL---NYNAKLSDFGLA 228
QP S + + VA A G YL + I+RD N LL AK+ DFG+A
Sbjct: 125 QPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 182
Query: 229 KDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+D S M + PE G T+K+D +SFGV+L E+ S
Sbjct: 183 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 106/230 (46%), Gaps = 13/230 (5%)
Query: 56 KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE- 113
K+ S + LK R N LG G FG V++G + P + + +AVK L +
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVC 73
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYI 173
S Q L++L E + + H N+V+ IG L+ R ++ E M G L++ L T
Sbjct: 74 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 174 QPLSWTIR--MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL---NYNAKLSDFGLA 228
QP S + + VA A G YL + I+RD N LL AK+ DFG+A
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
Query: 229 KDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+D S M + PE G T+K+D +SFGV+L E+ S
Sbjct: 192 QDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 132/294 (44%), Gaps = 44/294 (14%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ-ESLQGHLEWLTEIKHLGQL 131
+ V+G G FG V +G AP + + +A+K L + + E+L+E +GQ
Sbjct: 19 EEVIGAGEFGEVCRG----RLKAPGKKES--CVAIKTLKGGYTERQRREFLSEASIMGQF 72
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL-FRTGASYIQPLSWTIRMKVALGAAK 190
HPN+++L G +++ EFM G+L++ L G + L +R G A
Sbjct: 73 EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR-----GIAS 127
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG---TY 247
G+ YL + ++RD NIL++ N K+SDFGL++ S T +G
Sbjct: 128 GMRYLA--EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPI 185
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKNRPSREHNLIEWAKPYLQSKR 306
+ APE +A T+ SD +S+G+V+ E++S G R PY
Sbjct: 186 RWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGER------------------PYWDMSN 227
Query: 307 RIFQVMDARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALEQI 356
+ V++A IE Y L L + C + RP +VV AL+++
Sbjct: 228 Q--DVINA-IEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 133/294 (45%), Gaps = 46/294 (15%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
+ V+G G FG V G + P + + I ++ Q ++L E +GQ
Sbjct: 27 ERVIGAGEFGEVCSGRLK----LPGKRELPVAIKTLKVGYTEKQRR-DFLGEASIMGQFD 81
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL--GAAK 190
HPN++ L G + ++V E+M GSL+ L + + T+ V + G +
Sbjct: 82 HPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQF------TVIQLVGMLRGISA 135
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRVMGTY 247
G+ YL SD V +RD NIL++ N K+SDFGL++ D P + + ++
Sbjct: 136 GMKYL-SDMGYV-HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PI 191
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKNRPSREHNLIEWAKPYLQSKR 306
+ APE +A T+ SDV+S+G+V+ E++S G R PY +
Sbjct: 192 RWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGER------------------PYWEMTN 233
Query: 307 RIFQVMDARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALEQI 356
+ V+ A EG Y L + + L + C E RP DE+V L+++
Sbjct: 234 Q--DVIKAVEEG-YRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES-LQGHLEWLTEIKHLGQLYH 133
VLG G FG V+KG + P + +A+K LN+ + + ++E++ E + + H
Sbjct: 22 VLGSGAFGTVYKG-----IWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 76
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRMKVALGAA 189
P+LV+L+G CL +L V + MP G L H G+ + L+W +++ A
Sbjct: 77 PHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLL--LNWCVQI------A 127
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
KG+ YL ++ ++++RD N+L+ + K++DFGLA+ + + + +
Sbjct: 128 KGMMYL--EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKW 185
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
A E + T +SDV+S+GV + E+++
Sbjct: 186 MALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES-LQGHLEWLTEIKHLGQLYH 133
VLG G FG V+KG + P + +A+K LN+ + + ++E++ E + + H
Sbjct: 45 VLGSGAFGTVYKG-----IWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 99
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRMKVALGAA 189
P+LV+L+G CL +L V + MP G L H G+ + L+W +++ A
Sbjct: 100 PHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLL--LNWCVQI------A 150
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
KG+ YL ++ ++++RD N+L+ + K++DFGLA+ + + + +
Sbjct: 151 KGMMYL--EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKW 208
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
A E + T +SDV+S+GV + E+++
Sbjct: 209 MALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 109/219 (49%), Gaps = 29/219 (13%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ-ESLQGHLEWLTEIKHLGQL-Y 132
V+GEG FG V K I + G M A+KR+ + S H ++ E++ L +L +
Sbjct: 29 VIGEGNFGQVLKARI-------KKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL-----------FRTGASYIQPLSWTIR 181
HPN++ L+G C + L E+ P G+L + L F S LS
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 182 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 241
+ A A+G+ YL + + I+R+ NIL+ NY AK++DFGL++ G + +V
Sbjct: 142 LHFAADVARGMDYL--SQKQFIHRNLAARNILVGENYVAKIADFGLSR----GQEVYVK- 194
Query: 242 RVMGTYG--YAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ MG + A E + T SDV+S+GV+L E++S
Sbjct: 195 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 16/206 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG GG V ++ E T + + R +E+L+ + E+ + QL H N
Sbjct: 19 LGGGGMSTV---YLAEDTILNIKVAIKAIFIPPREKEETLK---RFEREVHNSSQLSHQN 72
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
+V +I EDD LV E++ +L ++ G PLS + G+ +
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-----PLSVDTAINFTNQILDGIKHA 127
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
H ++++RD K NIL+D N K+ DFG+AK S + + V+GT Y +PE
Sbjct: 128 HD--MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQYFSPE-Q 183
Query: 256 ATGHLTAK-SDVYSFGVVLLEMLSGR 280
A G T + +D+YS G+VL EML G
Sbjct: 184 AKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 122/291 (41%), Gaps = 54/291 (18%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
+GEG FG VF+ P P T ++AVK L +E S ++ E + + +P
Sbjct: 55 IGEGAFGRVFQA--RAPGLLPYEPFT--MVAVKMLKEEASADMQADFQREAALMAEFDNP 110
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL-------------------FRTGASYIQP 175
N+VKL+G C L++E+M G L L R + P
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
LS ++ +A A G+AYL + K ++RD T N L+ N K++DFGL+++ +
Sbjct: 171 LSCAEQLCIARQVAAGMAYL--SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSAD 228
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS----------GRRVI-- 283
+ PE + T +SDV+++GVVL E+ S VI
Sbjct: 229 YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYY 288
Query: 284 ---------DKNRPSREHNLIE--WAK-----PYLQSKRRIFQVMDARIEG 318
+N P +NL+ W+K P S RI Q M R EG
Sbjct: 289 VRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEG 339
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 140/322 (43%), Gaps = 57/322 (17%)
Query: 55 IKSFSFNGLKTATRNF---------RPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVI 105
+ F+F A R F + + V+G G FG V G P + + +
Sbjct: 7 VDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSG----RLKVPGK--REICV 60
Query: 106 AVKRLNQ-ESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENH 164
A+K L + + ++L+E +GQ HPN++ L G + +++ E+M GSL+
Sbjct: 61 AIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAF 120
Query: 165 LFRTGASYIQPLSWTIRMKVAL--GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKL 222
L + + T+ V + G G+ YL A ++RD NIL++ N K+
Sbjct: 121 LRKNDGRF------TVIQLVGMLRGIGSGMKYLSDMSA--VHRDLAARNILVNSNLVCKV 172
Query: 223 SDFGLAK---DGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS- 278
SDFG+++ D P + + ++ + APE +A T+ SDV+S+G+V+ E++S
Sbjct: 173 SDFGMSRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSY 230
Query: 279 GRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAV----LAIK 334
G R PY + V+ A IE Y L + + L +
Sbjct: 231 GER------------------PYWDMSNQ--DVIKA-IEEGYRLPPPMDCPIALHQLMLD 269
Query: 335 CLSNEPKFRPTMDEVVKALEQI 356
C E RP ++V L+++
Sbjct: 270 CWQKERSDRPKFGQIVNMLDKL 291
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 105/230 (45%), Gaps = 13/230 (5%)
Query: 56 KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE- 113
K+ S + LK R N LG G FG V++G + P + + +AVK L +
Sbjct: 35 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVC 90
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYI 173
S Q L++L E + + H N+V+ IG L+ R ++ E M G L++ L T
Sbjct: 91 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 150
Query: 174 QPLSWTIR--MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL---NYNAKLSDFGLA 228
QP S + + VA A G YL + I+RD N LL AK+ DFG+A
Sbjct: 151 QPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 208
Query: 229 KDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+D M + PE G T+K+D +SFGV+L E+ S
Sbjct: 209 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 105/230 (45%), Gaps = 13/230 (5%)
Query: 56 KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE- 113
K+ S + LK R N LG G FG V++G + P + + +AVK L +
Sbjct: 58 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVC 113
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYI 173
S Q L++L E + + H N+V+ IG L+ R ++ E M G L++ L T
Sbjct: 114 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 173
Query: 174 QPLSWTIR--MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL---NYNAKLSDFGLA 228
QP S + + VA A G YL + I+RD N LL AK+ DFG+A
Sbjct: 174 QPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231
Query: 229 KDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+D M + PE G T+K+D +SFGV+L E+ S
Sbjct: 232 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 135/314 (42%), Gaps = 61/314 (19%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-------NQESLQGHLEW 121
N + LG G FG V ++ + + + +AVK L +E+L L+
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYI-----QPL 176
++ HLGQ H N+V L+G C L++ E+ G L N L R + + +PL
Sbjct: 103 MS---HLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 157
Query: 177 SWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ 236
+ + A+G+A+L S I+RD N+LL + AK+ DFGLA+D S
Sbjct: 158 ELRDLLHFSSQVAQGMAFLASKNC--IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 215
Query: 237 SHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS-------GRRVIDKNRPS 289
V + APE + T +SDV+S+G++L E+ S G V S
Sbjct: 216 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV-----NS 270
Query: 290 REHNLI----EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPT 345
+ + L+ + A+P K I+ +M A C + EP RPT
Sbjct: 271 KFYKLVKDGYQMAQPAFAPK-NIYSIMQA--------------------CWALEPTHRPT 309
Query: 346 MDEVVKAL-EQIQD 358
++ L EQ Q+
Sbjct: 310 FQQICSFLQEQAQE 323
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 135/314 (42%), Gaps = 61/314 (19%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-------NQESLQGHLEW 121
N + LG G FG V ++ + + + +AVK L +E+L L+
Sbjct: 39 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 94
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYI-----QPL 176
++ HLGQ H N+V L+G C L++ E+ G L N L R + + +PL
Sbjct: 95 MS---HLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 149
Query: 177 SWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ 236
+ + A+G+A+L S I+RD N+LL + AK+ DFGLA+D S
Sbjct: 150 ELRDLLHFSSQVAQGMAFLASKNC--IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 207
Query: 237 SHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS-------GRRVIDKNRPS 289
V + APE + T +SDV+S+G++L E+ S G V S
Sbjct: 208 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV-----NS 262
Query: 290 REHNLI----EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPT 345
+ + L+ + A+P K I+ +M A C + EP RPT
Sbjct: 263 KFYKLVKDGYQMAQPAFAPK-NIYSIMQA--------------------CWALEPTHRPT 301
Query: 346 MDEVVKAL-EQIQD 358
++ L EQ Q+
Sbjct: 302 FQQICSFLQEQAQE 315
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 104/201 (51%), Gaps = 16/201 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V+ G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 40 LGGGQYGEVYVGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 89
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L+G C + +V E+MP G+L ++L + + + + +A + + YL
Sbjct: 90 LVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAV---VLLYMATQISSAMEYL 146
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +
Sbjct: 147 --EKKNFIHRDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESL 203
Query: 256 ATGHLTAKSDVYSFGVVLLEM 276
A + KSDV++FGV+L E+
Sbjct: 204 AYNTFSIKSDVWAFGVLLWEI 224
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 132/287 (45%), Gaps = 32/287 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G + A +AVK +N+ SL+ +E+L E +
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETR----VAVKTVNESASLRERIEFLNEASVMKGFTCH 77
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRTGASY---IQPLSWTIRMKVALGAA 189
++V+L+G + L+V E M G L+++L R A P + +++A A
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
G+AYL++ K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 138 DGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 195
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPY--LQSKRR 307
APE + G T SD++SFGVVL E+ S L E +PY L +++
Sbjct: 196 MAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAE--QPYQGLSNEQV 238
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE 354
+ VMD Q T ++ + C PK RPT E+V L+
Sbjct: 239 LKFVMDGGYLDQPDNCPERVTDLMRM-CWQFNPKMRPTFLEIVNLLK 284
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 132/287 (45%), Gaps = 32/287 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G + A +AVK +N+ SL+ +E+L E +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETR----VAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRTGASY---IQPLSWTIRMKVALGAA 189
++V+L+G + L+V E M G L+++L R A P + +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
G+AYL++ K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 141 DGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPY--LQSKRR 307
APE + G T SD++SFGVVL E+ S L E +PY L +++
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAE--QPYQGLSNEQV 241
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE 354
+ VMD Q T ++ + C PK RPT E+V L+
Sbjct: 242 LKFVMDGGYLDQPDNCPERVTDLMRM-CWQFNPKMRPTFLEIVNLLK 287
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 124/256 (48%), Gaps = 20/256 (7%)
Query: 105 IAVKRLNQESLQGHL-EWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLEN 163
+A+KR+N E Q + E L EI+ + Q +HPN+V + D LV + + GS+ +
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 164 ---HLFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA 220
H+ G L + + +GL YLH K I+RD K NILL + +
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH--KNGQIHRDVKAGNILLGEDGSV 160
Query: 221 KLSDFGLAKDGPTG---SQSHVSTRVMGTYGYAAPEYMATGH-LTAKSDVYSFGVVLLEM 276
+++DFG++ TG +++ V +GT + APE M K+D++SFG+ +E+
Sbjct: 161 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 220
Query: 277 LSGRRVIDKNRPSREHNL-IEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKC 335
+G K P + L ++ P L++ V D + +Y G + + + C
Sbjct: 221 ATGAAPYHKYPPMKVLMLTLQNDPPSLETG-----VQDKEMLKKY--GKSFRKMISL--C 271
Query: 336 LSNEPKFRPTMDEVVK 351
L +P+ RPT E+++
Sbjct: 272 LQKDPEKRPTAAELLR 287
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 124/256 (48%), Gaps = 20/256 (7%)
Query: 105 IAVKRLNQESLQGHL-EWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLEN 163
+A+KR+N E Q + E L EI+ + Q +HPN+V + D LV + + GS+ +
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 164 ---HLFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA 220
H+ G L + + +GL YLH + I+RD K NILL + +
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSV 155
Query: 221 KLSDFGLAKDGPTG---SQSHVSTRVMGTYGYAAPEYMATGH-LTAKSDVYSFGVVLLEM 276
+++DFG++ TG +++ V +GT + APE M K+D++SFG+ +E+
Sbjct: 156 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 215
Query: 277 LSGRRVIDKNRPSREHNL-IEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKC 335
+G K P + L ++ P L++ V D + +Y G + + + C
Sbjct: 216 ATGAAPYHKYPPMKVLMLTLQNDPPSLETG-----VQDKEMLKKY--GKSFRKMISL--C 266
Query: 336 LSNEPKFRPTMDEVVK 351
L +P+ RPT E+++
Sbjct: 267 LQKDPEKRPTAAELLR 282
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 126/267 (47%), Gaps = 26/267 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL--QGHLEWL-TEI 125
+F+ ++LG+G F V++ TG+ +A+K ++++++ G ++ + E+
Sbjct: 12 DFKVGNLLGKGSFAGVYRA---------ESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEV 62
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
K QL HP++++L Y + ++ LV E G + +L + ++P S
Sbjct: 63 KIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL----KNRVKPFSENEARHFM 118
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 245
G+ YLHS +++RD SN+LL N N K++DFGLA + H + + G
Sbjct: 119 HQIITGMLYLHSHG--ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCG 174
Query: 246 TYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHN---LIEWAKP-- 300
T Y +PE +SDV+S G + +L GR D + N L ++ P
Sbjct: 175 TPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSF 234
Query: 301 -YLQSKRRIFQVMDARIEGQYSLGAAL 326
+++K I Q++ + SL + L
Sbjct: 235 LSIEAKDLIHQLLRRNPADRLSLSSVL 261
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 145/325 (44%), Gaps = 39/325 (12%)
Query: 54 NIKSFSFNGLKTATRNFRPDSV------LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAV 107
N+ S + TR+ P+ LG+G FG V+K E T ++ A
Sbjct: 17 NLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE---------TSVLAAA 67
Query: 108 KRLNQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR 167
K ++ +S + +++ EI L HPN+VKL+ +++ ++ EF G+++ +
Sbjct: 68 KVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 127
Query: 168 TGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGL 227
+PL+ + V L YLH +K +I+RD K NIL L+ + KL+DFG+
Sbjct: 128 LE----RPLTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFGV 181
Query: 228 AKDGPTGSQSHVSTRVMGTYGYAAPEYMATGH-----LTAKSDVYSFGVVLLEM------ 276
+ Q S +GT + APE + K+DV+S G+ L+EM
Sbjct: 182 SAKNTRTIQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
Query: 277 ---LSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAI 333
L+ RV+ K S L + ++ K + + ++ ++ +++ L+ + +
Sbjct: 240 HHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV 299
Query: 334 KCLSNEPKFRPTMDEVVKALEQIQD 358
SN+P + + E+++D
Sbjct: 300 D--SNKPIRELIAEAKAEVTEEVED 322
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 145/325 (44%), Gaps = 39/325 (12%)
Query: 54 NIKSFSFNGLKTATRNFRPDSV------LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAV 107
N+ S + TR+ P+ LG+G FG V+K E T ++ A
Sbjct: 17 NLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE---------TSVLAAA 67
Query: 108 KRLNQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR 167
K ++ +S + +++ EI L HPN+VKL+ +++ ++ EF G+++ +
Sbjct: 68 KVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 127
Query: 168 TGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGL 227
+PL+ + V L YLH +K +I+RD K NIL L+ + KL+DFG+
Sbjct: 128 LE----RPLTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFGV 181
Query: 228 AKDGPTGSQSHVSTRVMGTYGYAAPEYMATGH-----LTAKSDVYSFGVVLLEM------ 276
+ Q S +GT + APE + K+DV+S G+ L+EM
Sbjct: 182 SAKNTRXIQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
Query: 277 ---LSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAI 333
L+ RV+ K S L + ++ K + + ++ ++ +++ L+ + +
Sbjct: 240 HHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV 299
Query: 334 KCLSNEPKFRPTMDEVVKALEQIQD 358
SN+P + + E+++D
Sbjct: 300 D--SNKPIRELIAEAKAEVTEEVED 322
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 104/231 (45%), Gaps = 26/231 (11%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL-TEIK 126
N VLG G FG V ++ Y ++ G + +AVK L +++ E L +E+K
Sbjct: 45 ENLEFGKVLGSGAFGKV----MNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK 100
Query: 127 HLGQL-YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASY------------- 172
+ QL H N+V L+G C L++E+ G L N+L +
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 160
Query: 173 -----IQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGL 227
+ L++ + A AKG+ +L ++RD N+L+ K+ DFGL
Sbjct: 161 EEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC--VHRDLAARNVLVTHGKVVKICDFGL 218
Query: 228 AKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
A+D + S V + APE + G T KSDV+S+G++L E+ S
Sbjct: 219 ARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 132/287 (45%), Gaps = 32/287 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G + A +AVK +N+ SL+ +E+L E +
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETR----VAVKTVNESASLRERIEFLNEASVMKGFTCH 79
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRTGASY---IQPLSWTIRMKVALGAA 189
++V+L+G + L+V E M G L+++L R A P + +++A A
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
G+AYL++ K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 140 DGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPY--LQSKRR 307
APE + G T SD++SFGVVL E+ S L E +PY L +++
Sbjct: 198 MAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAE--QPYQGLSNEQV 240
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE 354
+ VMD Q T ++ + C PK RPT E+V L+
Sbjct: 241 LKFVMDGGYLDQPDNCPERVTDLMRM-CWQFNPKMRPTFLEIVNLLK 286
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G P T +A+K +N+ S++ +E+L E + +
Sbjct: 18 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 73
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR-----TGASYIQPLSWTIRMKVALGAA 189
++V+L+G + L++ E M +G L+++L + P S + +++A A
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
G+AYL+++K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 134 DGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 191
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEM 276
+PE + G T SDV+SFGVVL E+
Sbjct: 192 MSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 133/287 (46%), Gaps = 32/287 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G + A +AVK +N+ SL+ +E+L E +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETR----VAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRTGASY---IQPLSWTIRMKVALGAA 189
++V+L+G + L+V E M G L+++L R A P + +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
G+AYL++ K ++RD N ++ ++ K+ DFG+ +D + + + +
Sbjct: 141 DGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRW 198
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPY--LQSKRR 307
APE + G T SD++SFGVVL E+ S L E +PY L +++
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAE--QPYQGLSNEQV 241
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE 354
+ VMD Q T ++ + C PK RPT E+V L+
Sbjct: 242 LKFVMDGGYLDQPDNCPERVTDLMRM-CWQFNPKMRPTFLEIVNLLK 287
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 133/301 (44%), Gaps = 47/301 (15%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
+ V+G G FG V G + P + + I ++ Q ++L E +GQ
Sbjct: 48 ERVIGAGEFGEVCSGRLK----LPGKRDVAVAIKTLKVGYTEKQ-RRDFLCEASIMGQFD 102
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL--GAAK 190
HPN+V L G ++V EFM G+L+ L + + T+ V + G A
Sbjct: 103 HPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQF------TVIQLVGMLRGIAA 156
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRVMGTY 247
G+ YL +D V +RD NIL++ N K+SDFGL++ D P + ++
Sbjct: 157 GMRYL-ADMGYV-HRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKI--PV 212
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKNRPSREHNLIEWAKPYLQSKR 306
+ APE + T+ SDV+S+G+V+ E++S G R PY
Sbjct: 213 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGER------------------PYWDMSN 254
Query: 307 RIFQVMDARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALEQ-IQDTND 361
+ V+ A IE Y L A + L + C E RP +++V L++ I++ N
Sbjct: 255 Q--DVIKA-IEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKMIRNPNS 311
Query: 362 A 362
A
Sbjct: 312 A 312
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G P T +A+K +N+ S++ +E+L E + +
Sbjct: 27 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR-----TGASYIQPLSWTIRMKVALGAA 189
++V+L+G + L++ E M +G L+++L + P S + +++A A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
G+AYL+++K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 143 DGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 200
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEM 276
+PE + G T SDV+SFGVVL E+
Sbjct: 201 MSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 131/287 (45%), Gaps = 32/287 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G + A +AVK +N+ SL+ +E+L E +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETR----VAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRTGASY---IQPLSWTIRMKVALGAA 189
++V+L+G + L+V E M G L+++L R A P + +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
G+AYL++ K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 141 DGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPY--LQSKRR 307
APE + G T SD++SFGVVL E+ S L E +PY L +++
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAE--QPYQGLSNEQV 241
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE 354
+ VMD Q T ++ + C P RPT E+V L+
Sbjct: 242 LKFVMDGGYLDQPDNCPERVTDLMRM-CWQFNPNMRPTFLEIVNLLK 287
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 130/295 (44%), Gaps = 46/295 (15%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ-ESLQGHLEWLTEIKHLGQL 131
+ V+G G FG V G H P + + +A+K L + + ++L+E +GQ
Sbjct: 12 EQVIGAGEFGEVCSG----HLKLPGK--REIFVAIKTLKSGYTEKQRRDFLSEASIMGQF 65
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL--GAA 189
HPN++ L G + +++ EFM GSL++ L + + T+ V + G A
Sbjct: 66 DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQF------TVIQLVGMLRGIA 119
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG---T 246
G+ YL ++R NIL++ N K+SDFGL++ + T +G
Sbjct: 120 AGMKYLAD--MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIP 177
Query: 247 YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKNRPSREHNLIEWAKPYLQSK 305
+ APE + T+ SDV+S+G+V+ E++S G R PY
Sbjct: 178 IRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGER------------------PYWDMT 219
Query: 306 RRIFQVMDARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALEQI 356
+ V++A IE Y L + L + C + RP ++V L+++
Sbjct: 220 NQ--DVINA-IEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 28/220 (12%)
Query: 68 RNFRPDSV------LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW 121
R+ P+ V LG+G FG V+K E TG + A K + +S + ++
Sbjct: 13 RDLDPNEVWEIVGELGDGAFGKVYKAKNKE---------TGALAAAKVIETKSEEELEDY 63
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIR 181
+ EI+ L HP +VKL+G D ++ EF P G+++ + +P I+
Sbjct: 64 IVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEP---QIQ 120
Query: 182 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 241
+ V + L +LHS ++I+RD K N+L+ L + +L+DFG++ Q S
Sbjct: 121 V-VCRQMLEALNFLHS--KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS- 176
Query: 242 RVMGTYGYAAPEYMATGHLTA-----KSDVYSFGVVLLEM 276
+GT + APE + + K+D++S G+ L+EM
Sbjct: 177 -FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 15/164 (9%)
Query: 120 EWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRT--GASYIQPLS 177
++L+E +GQ HPN+++L G ++V E+M GSL+ L RT G I L
Sbjct: 96 DFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL-RTHDGQFTIMQLV 154
Query: 178 WTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTG 234
+R G G+ YL SD V +RD N+L+D N K+SDFGL++ D P
Sbjct: 155 GMLR-----GVGAGMRYL-SDLGYV-HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207
Query: 235 SQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ + ++ + APE +A ++ SDV+SFGVV+ E+L+
Sbjct: 208 AXTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 138/315 (43%), Gaps = 54/315 (17%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIK 126
+N LGEG FG V K + R G V AVK L + + L + L+E
Sbjct: 23 KNLVLGKTLGEGEFGKVVKA---TAFHLKGRAGYTTV-AVKMLKENASPSELRDLLSEFN 78
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL---FRTGASYI---------- 173
L Q+ HP+++KL G C +D LL+ E+ GSL L + G Y+
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 174 ------QPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGL 227
+ L+ + A ++G+ YL + K+++RD NIL+ K+SDFGL
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLA--EMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 228 AKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHL-----TAKSDVYSFGVVLLEMLS-GRR 281
++D + V + G ++MA L T +SDV+SFGV+L E+++ G
Sbjct: 197 SRD-----VYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 282 VIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPK 341
P R NL L++ R+ + D E Y L ++C EP
Sbjct: 252 PYPGIPPERLFNL-------LKTGHRM-ERPDNCSEEMYR---------LMLQCWKQEPD 294
Query: 342 FRPTMDEVVKALEQI 356
RP ++ K LE++
Sbjct: 295 KRPVFADISKDLEKM 309
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 134/295 (45%), Gaps = 39/295 (13%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ-ESLQGHLEWLTEIKHLGQLYH 133
V+G G FG V+KG + + P +A+K L + + +++L E +GQ H
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVP-----VAIKTLKAGYTEKQRVDFLGEAGIMGQFSH 105
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLF-RTGASYIQPLSWTIRMKVALGAAKGL 192
N+++L G + +++ E+M G+L+ L + G + L +R G A G+
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR-----GIAAGM 160
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRVMGTYGY 249
YL + ++RD NIL++ N K+SDFGL++ D P + + ++ +
Sbjct: 161 KYLAN--MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI--PIRW 216
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKNRPSREHNLIEWAKPYLQ-SKRR 307
APE ++ T+ SDV+SFG+V+ E+++ G R PY + S
Sbjct: 217 TAPEAISYRKFTSASDVWSFGIVMWEVMTYGER------------------PYWELSNHE 258
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDTNDA 362
+ + ++ + L ++C E RP ++V L+++ D+
Sbjct: 259 VMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS 313
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 142/320 (44%), Gaps = 39/320 (12%)
Query: 59 SFNGLKTATRNFRPDSV------LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ 112
S + TR+ P+ LG+G FG V+K E T ++ A K ++
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE---------TSVLAAAKVIDT 72
Query: 113 ESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASY 172
+S + +++ EI L HPN+VKL+ +++ ++ EF G+++ +
Sbjct: 73 KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE--- 129
Query: 173 IQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGP 232
+PL+ + V L YLH +K +I+RD K NIL L+ + KL+DFG++
Sbjct: 130 -RPLTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFGVSAKNT 186
Query: 233 TGSQSHVSTRVMGTYGYAAPEYMATGH-----LTAKSDVYSFGVVLLEM---------LS 278
Q +GT + APE + K+DV+S G+ L+EM L+
Sbjct: 187 RXIQRR--DXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELN 244
Query: 279 GRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSN 338
RV+ K S L + ++ K + + ++ ++ +++ L+ + + SN
Sbjct: 245 PMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD--SN 302
Query: 339 EPKFRPTMDEVVKALEQIQD 358
+P + + E+++D
Sbjct: 303 KPIRELIAEAKAEVTEEVED 322
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 28/220 (12%)
Query: 68 RNFRPDSV------LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW 121
R+ P+ V LG+G FG V+K E TG + A K + +S + ++
Sbjct: 5 RDLDPNEVWEIVGELGDGAFGKVYKAKNKE---------TGALAAAKVIETKSEEELEDY 55
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIR 181
+ EI+ L HP +VKL+G D ++ EF P G+++ + +P I+
Sbjct: 56 IVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEP---QIQ 112
Query: 182 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 241
+ V + L +LHS ++I+RD K N+L+ L + +L+DFG++ Q S
Sbjct: 113 V-VCRQMLEALNFLHS--KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS- 168
Query: 242 RVMGTYGYAAPEYMATGHLTA-----KSDVYSFGVVLLEM 276
+GT + APE + + K+D++S G+ L+EM
Sbjct: 169 -FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 24/218 (11%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE---SLQGHLEWLTEI 125
+F S LG G G VFK ++ P +G+V+A K ++ E +++ + + E+
Sbjct: 69 DFEKISELGAGNGGVVFK-----VSHKP----SGLVMARKLIHLEIKPAIRNQI--IREL 117
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
+ L + P +V G D + E M GSL+ L + G + I KV+
Sbjct: 118 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-----IPEQILGKVS 172
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 245
+ KGL YL +K K+++RD K SNIL++ KL DFG++ ++ +G
Sbjct: 173 IAVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ----LIDSMANSFVG 227
Query: 246 TYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
T Y +PE + H + +SD++S G+ L+EM GR I
Sbjct: 228 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 132/287 (45%), Gaps = 32/287 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G + A +AVK +N+ SL+ +E+L E +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETR----VAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRTGASY---IQPLSWTIRMKVALGAA 189
++V+L+G + L+V E M G L+++L R A P + +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
G+AYL++ K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 141 DGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPY--LQSKRR 307
APE + G T SD++SFGVVL E+ S L E +PY L +++
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAE--QPYQGLSNEQV 241
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE 354
+ VMD Q T ++ + C PK RPT E+V L+
Sbjct: 242 LKFVMDGGYLDQPDNCPERVTDLMRM-CWQFNPKMRPTFLEIVNLLK 287
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 100/216 (46%), Gaps = 30/216 (13%)
Query: 73 DSVLGE----GGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE--WLTEIK 126
D VLGE G FG VF G + ++AVK +E+L L+ +L E +
Sbjct: 115 DLVLGEQIGRGNFGEVFSGRLR---------ADNTLVAVKSC-RETLPPDLKAKFLQEAR 164
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
L Q HPN+V+LIG C + +V E + G L GA +R+K L
Sbjct: 165 ILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR--------LRVKTLL 216
Query: 187 ----GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AA G+ YL S I+RD N L+ K+SDFG++++ G +
Sbjct: 217 QMVGDAAAGMEYLESKCC--IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGL 274
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ APE + G +++SDV+SFG++L E S
Sbjct: 275 RQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 15/164 (9%)
Query: 120 EWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRT--GASYIQPLS 177
++L+E +GQ HPN+++L G ++V E+M GSL+ L RT G I L
Sbjct: 96 DFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL-RTHDGQFTIMQLV 154
Query: 178 WTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTG 234
+R G G+ YL SD V +RD N+L+D N K+SDFGL++ D P
Sbjct: 155 GMLR-----GVGAGMRYL-SDLGYV-HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207
Query: 235 SQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ + ++ + APE +A ++ SDV+SFGVV+ E+L+
Sbjct: 208 AYTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 138/315 (43%), Gaps = 54/315 (17%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIK 126
+N LGEG FG V K + R G V AVK L + + L + L+E
Sbjct: 23 KNLVLGKTLGEGEFGKVVKA---TAFHLKGRAGYTTV-AVKMLKENASPSELRDLLSEFN 78
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL---FRTGASYI---------- 173
L Q+ HP+++KL G C +D LL+ E+ GSL L + G Y+
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 174 ------QPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGL 227
+ L+ + A ++G+ YL + K+++RD NIL+ K+SDFGL
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLA--EMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 228 AKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHL-----TAKSDVYSFGVVLLEMLS-GRR 281
++D + V + G ++MA L T +SDV+SFGV+L E+++ G
Sbjct: 197 SRD-----VYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 282 VIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPK 341
P R NL L++ R+ + D E Y L ++C EP
Sbjct: 252 PYPGIPPERLFNL-------LKTGHRM-ERPDNCSEEMYR---------LMLQCWKQEPD 294
Query: 342 FRPTMDEVVKALEQI 356
RP ++ K LE++
Sbjct: 295 KRPVFADISKDLEKM 309
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 107/207 (51%), Gaps = 12/207 (5%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G P T +A+K +N+ S++ +E+L E + +
Sbjct: 23 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 78
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRTGAS---YIQPLSWTIRMKVALGAA 189
++V+L+G + L++ E M +G L+++L R + + P S + +++A A
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
G+AYL+++K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 139 DGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 196
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEM 276
+PE + G T SDV+SFGVVL E+
Sbjct: 197 MSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 109/219 (49%), Gaps = 19/219 (8%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT 123
K +F VLG+G FG VF RP +G + A+K L + +L+ T
Sbjct: 24 KADPSHFELLKVLGQGSFGKVFL------VRKVTRPDSGHLYAMKVLKKATLKVRDRVRT 77
Query: 124 EIKH--LGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
+++ L + HP +VKL Y + + +L L+ +F+ G L F + + +
Sbjct: 78 KMERDILADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDV 132
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +A A GL +LHS +IYRD K NILLD + KL+DFGL+K+ + S
Sbjct: 133 KFYLA-ELALGLDHLHS--LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS 189
Query: 241 TRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GT Y APE + + +D +S+GV++ EML+G
Sbjct: 190 --FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 48/295 (16%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ-ESLQGHLEWLTEIKHLGQL 131
+ V+G G FG V G P + + +A+K L + + ++L+E +GQ
Sbjct: 19 EKVIGVGEFGEVCSG----RLKVPGK--REICVAIKTLKAGYTDKQRRDFLSEASIMGQF 72
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL--GAA 189
HPN++ L G + +++ E+M GSL+ L + + T+ V + G
Sbjct: 73 DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRF------TVIQLVGMLRGIG 126
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRVMGT 246
G+ YL SD + V +RD NIL++ N K+SDFG+++ D P + + ++
Sbjct: 127 SGMKYL-SDMSYV-HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--P 182
Query: 247 YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKNRPSREHNLIEWAKPYLQSK 305
+ APE +A T+ SDV+S+G+V+ E++S G R PY
Sbjct: 183 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER------------------PYWDMS 224
Query: 306 RRIFQVMDARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALEQI 356
+ V+ A IE Y L + + L + C E RP ++V L+++
Sbjct: 225 NQ--DVIKA-IEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 276
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES-LQGHLEWLTEIKHLGQLYHP 134
LGEG +G V+K E TG ++A+K++ ES LQ E + EI + Q P
Sbjct: 37 LGEGSYGSVYKAIHKE---------TGQIVAIKQVPVESDLQ---EIIKEISIMQQCDSP 84
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAY 194
++VK G ++ +V E+ GS+ + + + + TI KGL Y
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQ----STLKGLEY 140
Query: 195 LHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEY 254
LH + I+RD K NILL+ +AKL+DFG+A G V+GT + APE
Sbjct: 141 LHF--MRKIHRDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEV 196
Query: 255 MATGHLTAKSDVYSFGVVLLEMLSGR 280
+ +D++S G+ +EM G+
Sbjct: 197 IQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 100/216 (46%), Gaps = 30/216 (13%)
Query: 73 DSVLGE----GGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE--WLTEIK 126
D VLGE G FG VF G + ++AVK +E+L L+ +L E +
Sbjct: 115 DLVLGEQIGRGNFGEVFSGRLR---------ADNTLVAVKSC-RETLPPDLKAKFLQEAR 164
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
L Q HPN+V+LIG C + +V E + G L GA +R+K L
Sbjct: 165 ILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR--------LRVKTLL 216
Query: 187 ----GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AA G+ YL S I+RD N L+ K+SDFG++++ G +
Sbjct: 217 QMVGDAAAGMEYLESKCC--IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGL 274
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ APE + G +++SDV+SFG++L E S
Sbjct: 275 RQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 107/207 (51%), Gaps = 12/207 (5%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G P T +A+K +N+ S++ +E+L E + +
Sbjct: 33 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRTGAS---YIQPLSWTIRMKVALGAA 189
++V+L+G + L++ E M +G L+++L R + + P S + +++A A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
G+AYL+++K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 149 DGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 206
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEM 276
+PE + G T SDV+SFGVVL E+
Sbjct: 207 MSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 48/295 (16%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ-ESLQGHLEWLTEIKHLGQL 131
+ V+G G FG V G P + + +A+K L + + ++L+E +GQ
Sbjct: 13 EKVIGVGEFGEVCSG----RLKVPGK--REICVAIKTLKAGYTDKQRRDFLSEASIMGQF 66
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL--GAA 189
HPN++ L G + +++ E+M GSL+ L + + T+ V + G
Sbjct: 67 DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRF------TVIQLVGMLRGIG 120
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRVMGT 246
G+ YL SD + V +RD NIL++ N K+SDFG+++ D P + + ++
Sbjct: 121 SGMKYL-SDMSYV-HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--P 176
Query: 247 YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKNRPSREHNLIEWAKPYLQSK 305
+ APE +A T+ SDV+S+G+V+ E++S G R PY
Sbjct: 177 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER------------------PYWDMS 218
Query: 306 RRIFQVMDARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALEQI 356
+ V+ A IE Y L + + L + C E RP ++V L+++
Sbjct: 219 NQ--DVIKA-IEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 109/221 (49%), Gaps = 27/221 (12%)
Query: 66 ATRNFRPDS---VLGE-GGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW 121
TR+ P+ ++GE G FG V+K E T ++ A K ++ +S + ++
Sbjct: 4 VTRDLNPEDFWEIIGELGDFGKVYKAQNKE---------TSVLAAAKVIDTKSEEELEDY 54
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIR 181
+ EI L HPN+VKL+ +++ ++ EF G+++ + +PL+ +
Sbjct: 55 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE----RPLTESQI 110
Query: 182 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGL-AKDGPTGSQSHVS 240
V L YLH +K +I+RD K NIL L+ + KL+DFG+ AK+ T Q S
Sbjct: 111 QVVCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDS 168
Query: 241 TRVMGTYGYAAPEYMATGH-----LTAKSDVYSFGVVLLEM 276
+GT + APE + K+DV+S G+ L+EM
Sbjct: 169 --FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 24/218 (11%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE---SLQGHLEWLTEI 125
+F S LG G G VFK ++ P +G+V+A K ++ E +++ + + E+
Sbjct: 34 DFEKISELGAGNGGVVFK-----VSHKP----SGLVMARKLIHLEIKPAIRNQI--IREL 82
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
+ L + P +V G D + E M GSL+ L + G + I KV+
Sbjct: 83 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-----IPEQILGKVS 137
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 245
+ KGL YL +K K+++RD K SNIL++ KL DFG++ ++ +G
Sbjct: 138 IAVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ----LIDSMANSFVG 192
Query: 246 TYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
T Y +PE + H + +SD++S G+ L+EM GR I
Sbjct: 193 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 134/299 (44%), Gaps = 44/299 (14%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIKHLGQLY 132
+LGEG FG V +G + + GT + +AVK +L+ S + E+L+E +
Sbjct: 41 ILGEGEFGSVMEGNLKQED------GTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFS 94
Query: 133 HPNLVKLIGYCLEDDHR-----LLVYEFMPKGSLENHL----FRTGASYIQPLSWTIRMK 183
HPN+++L+G C+E + +++ FM G L +L TG +I PL ++
Sbjct: 95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHI-PLQTLLKFM 153
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
V + A G+ YL + ++RD N +L + ++DFGL+K +G
Sbjct: 154 VDI--ALGMEYLSN--RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIA 209
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQ 303
+ A E +A T+KSDV++FGV + E+ R + + H + + YL
Sbjct: 210 KMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI--ATRGMTPYPGVQNHEMYD----YLL 263
Query: 304 SKRRIFQ---VMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDT 359
R+ Q +D E YS C +P RPT + LE++ ++
Sbjct: 264 HGHRLKQPEDCLDELYEIMYS-------------CWRTDPLDRPTFSVLRLQLEKLLES 309
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE---SLQGHLEWLTEI 125
+F S LG G G VFK ++ P +G+V+A K ++ E +++ + + E+
Sbjct: 10 DFEKISELGAGNGGVVFKV-----SHKP----SGLVMARKLIHLEIKPAIRNQI--IREL 58
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
+ L + P +V G D + E M GSL+ L + G + I KV+
Sbjct: 59 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-----IPEQILGKVS 113
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 245
+ KGL YL +K K+++RD K SNIL++ KL DFG++ ++ +G
Sbjct: 114 IAVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ----LIDEMANEFVG 168
Query: 246 TYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
T Y +PE + H + +SD++S G+ L+EM GR
Sbjct: 169 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 109/229 (47%), Gaps = 30/229 (13%)
Query: 58 FSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-NQESLQ 116
F +G + + +G+G FG V G G +AVK + N + Q
Sbjct: 183 FYRSGWALNMKELKLLQTIGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATAQ 231
Query: 117 GHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQP 175
+L E + QL H NLV+L+G +E+ L +V E+M KGSL ++L G S
Sbjct: 232 A---FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--- 285
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L +K +L + + YL + ++RD N+L+ + AK+SDFGL K+
Sbjct: 286 LGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEAS--- 340
Query: 236 QSHVSTRVMGT--YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRV 282
ST+ G + APE + + KSDV+SFG++L E+ S RV
Sbjct: 341 ----STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 385
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 128/280 (45%), Gaps = 46/280 (16%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ ++HT +AVK + S+ +L E + L H
Sbjct: 190 LGAGQFGEVWMATYNKHTK----------VAVKTMKPGSMSVE-AFLAEANVMKTLQHDK 238
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LVKL + + ++ EFM KGSL + L ++ QPL I + A+G+A++
Sbjct: 239 LVKLHA-VVTKEPIYIITEFMAKGSLLDFL-KSDEGSKQPLPKLIDFSAQI--AEGMAFI 294
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
++ I+RD + +NIL+ + K++DFGLA+ G++ + + APE +
Sbjct: 295 --EQRNYIHRDLRAANILVSASLVCKIADFGLAR---VGAKFPIK--------WTAPEAI 341
Query: 256 ATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYL-QSKRRIFQVMDA 314
G T KSDV+SFG++L+E+++ R+ PY S + + ++
Sbjct: 342 NFGSFTIKSDVWSFGILLMEIVTYGRI-----------------PYPGMSNPEVIRALER 384
Query: 315 RIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE 354
+ + ++C N P+ RPT + + L+
Sbjct: 385 GYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 424
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 28/212 (13%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLN--QESLQGHLEWLTEIKHLGQLY 132
+G G FG V+KG W + +AVK LN + Q + E+ L +
Sbjct: 32 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 78
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASY-IQPLSWTIRMKVALGAAKG 191
H N++ +GY + +V ++ SL +HL + + ++ L + +A A+G
Sbjct: 79 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARG 132
Query: 192 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 251
+ YLH+ +I+RD K++NI L + K+ DFGLA + S SH ++ G+ + A
Sbjct: 133 MDYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 190
Query: 252 PEYMA---TGHLTAKSDVYSFGVVLLEMLSGR 280
PE + + + +SDVY+FG+VL E+++G+
Sbjct: 191 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 109/229 (47%), Gaps = 30/229 (13%)
Query: 58 FSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-NQESLQ 116
F +G + + +G+G FG V G G +AVK + N + Q
Sbjct: 11 FYRSGWALNMKELKLLQTIGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATAQ 59
Query: 117 GHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQP 175
+L E + QL H NLV+L+G +E+ L +V E+M KGSL ++L G S
Sbjct: 60 A---FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--- 113
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L +K +L + + YL + ++RD N+L+ + AK+SDFGL K+
Sbjct: 114 LGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEAS--- 168
Query: 236 QSHVSTRVMGTY--GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRV 282
ST+ G + APE + + KSDV+SFG++L E+ S RV
Sbjct: 169 ----STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 213
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 24/218 (11%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE---SLQGHLEWLTEI 125
+F S LG G G VFK ++ P +G+V+A K ++ E +++ + + E+
Sbjct: 7 DFEKISELGAGNGGVVFK-----VSHKP----SGLVMARKLIHLEIKPAIRNQI--IREL 55
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
+ L + P +V G D + E M GSL+ L + G + I KV+
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-----IPEQILGKVS 110
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 245
+ KGL YL +K K+++RD K SNIL++ KL DFG++ ++ +G
Sbjct: 111 IAVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ----LIDSMANSFVG 165
Query: 246 TYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
T Y +PE + H + +SD++S G+ L+EM GR I
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE---SLQGHLEWLTEI 125
+F S LG G G VFK ++ P +G+V+A K ++ E +++ + + E+
Sbjct: 26 DFEKISELGAGNGGVVFK-----VSHKP----SGLVMARKLIHLEIKPAIRNQI--IREL 74
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
+ L + P +V G D + E M GSL+ L + G Q L KV+
Sbjct: 75 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVS 129
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 245
+ KGL YL +K K+++RD K SNIL++ KL DFG++ ++ +G
Sbjct: 130 IAVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ----LIDSMANSFVG 184
Query: 246 TYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
T Y +PE + H + +SD++S G+ L+EM GR
Sbjct: 185 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 24/218 (11%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE---SLQGHLEWLTEI 125
+F S LG G G VFK ++ P +G+V+A K ++ E +++ + + E+
Sbjct: 7 DFEKISELGAGNGGVVFKV-----SHKP----SGLVMARKLIHLEIKPAIRNQI--IREL 55
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
+ L + P +V G D + E M GSL+ L + G + I KV+
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-----IPEQILGKVS 110
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 245
+ KGL YL +K K+++RD K SNIL++ KL DFG++ ++ +G
Sbjct: 111 IAVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ----LIDSMANSFVG 165
Query: 246 TYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
T Y +PE + H + +SD++S G+ L+EM GR I
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 108/234 (46%), Gaps = 20/234 (8%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+G+G G V Y TG +A++++N + + EI + + +PN
Sbjct: 28 IGQGASGTV---------YTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
+V + L D +V E++ GSL + + T Q + V + L +L
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALEFL 132
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
HS++ VI+RD K+ NILL ++ + KL+DFG T QS ST V GT + APE +
Sbjct: 133 HSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQ-ITPEQSKRSTMV-GTPYWMAPEVV 188
Query: 256 ATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEW-AKPYLQSKRRI 308
K D++S G++ +EM+ G P R LI P LQ+ ++
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 242
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 24/218 (11%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE---SLQGHLEWLTEI 125
+F S LG G G VFK ++ P +G+V+A K ++ E +++ + + E+
Sbjct: 7 DFEKISELGAGNGGVVFK-----VSHKP----SGLVMARKLIHLEIKPAIRNQI--IREL 55
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
+ L + P +V G D + E M GSL+ L + G + I KV+
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-----IPEQILGKVS 110
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 245
+ KGL YL +K K+++RD K SNIL++ KL DFG++ ++ +G
Sbjct: 111 IAVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ----LIDSMANSFVG 165
Query: 246 TYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
T Y +PE + H + +SD++S G+ L+EM GR I
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 24/218 (11%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE---SLQGHLEWLTEI 125
+F S LG G G VFK ++ P +G+V+A K ++ E +++ + + E+
Sbjct: 7 DFEKISELGAGNGGVVFK-----VSHKP----SGLVMARKLIHLEIKPAIRNQI--IREL 55
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
+ L + P +V G D + E M GSL+ L + G + I KV+
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-----IPEQILGKVS 110
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 245
+ KGL YL +K K+++RD K SNIL++ KL DFG++ ++ +G
Sbjct: 111 IAVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ----LIDSMANSFVG 165
Query: 246 TYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
T Y +PE + H + +SD++S G+ L+EM GR I
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 24/218 (11%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE---SLQGHLEWLTEI 125
+F S LG G G VFK ++ P +G+V+A K ++ E +++ + + E+
Sbjct: 7 DFEKISELGAGNGGVVFK-----VSHKP----SGLVMARKLIHLEIKPAIRNQI--IREL 55
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
+ L + P +V G D + E M GSL+ L + G + I KV+
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-----IPEQILGKVS 110
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 245
+ KGL YL +K K+++RD K SNIL++ KL DFG++ ++ +G
Sbjct: 111 IAVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ----LIDSMANSFVG 165
Query: 246 TYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
T Y +PE + H + +SD++S G+ L+EM GR I
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G P T +A+K +N+ S++ +E+L E + +
Sbjct: 24 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 79
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR-----TGASYIQPLSWTIRMKVALGAA 189
++V+L+G + L++ E M +G L+++L + P S + +++A A
Sbjct: 80 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 139
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
G+AYL+++K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 140 DGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEM 276
+PE + G T SDV+SFGVVL E+
Sbjct: 198 MSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 137/315 (43%), Gaps = 54/315 (17%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIK 126
+N LGEG FG V K + R G +AVK L + + L + L+E
Sbjct: 23 KNLVLGKTLGEGEFGKVVKA---TAFHLKGRAGY-TTVAVKMLKENASPSELRDLLSEFN 78
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL---FRTGASYI---------- 173
L Q+ HP+++KL G C +D LL+ E+ GSL L + G Y+
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 174 ------QPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGL 227
+ L+ + A ++G+ YL + +++RD NIL+ K+SDFGL
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLA--EMSLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 228 AKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHL-----TAKSDVYSFGVVLLEMLS-GRR 281
++D + V + G ++MA L T +SDV+SFGV+L E+++ G
Sbjct: 197 SRD-----VYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 282 VIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPK 341
P R NL L++ R+ + D E Y L ++C EP
Sbjct: 252 PYPGIPPERLFNL-------LKTGHRM-ERPDNCSEEMYR---------LMLQCWKQEPD 294
Query: 342 FRPTMDEVVKALEQI 356
RP ++ K LE++
Sbjct: 295 KRPVFADISKDLEKM 309
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G P T +A+K +N+ S++ +E+L E + +
Sbjct: 20 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR-----TGASYIQPLSWTIRMKVALGAA 189
++V+L+G + L++ E M +G L+++L + P S + +++A A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
G+AYL+++K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 136 DGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 193
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEM 276
+PE + G T SDV+SFGVVL E+
Sbjct: 194 MSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G P T +A+K +N+ S++ +E+L E + +
Sbjct: 26 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR-----TGASYIQPLSWTIRMKVALGAA 189
++V+L+G + L++ E M +G L+++L + P S + +++A A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
G+AYL+++K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 142 DGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEM 276
+PE + G T SDV+SFGVVL E+
Sbjct: 200 MSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G P T +A+K +N+ S++ +E+L E + +
Sbjct: 26 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR-----TGASYIQPLSWTIRMKVALGAA 189
++V+L+G + L++ E M +G L+++L + P S + +++A A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
G+AYL+++K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 142 DGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEM 276
+PE + G T SDV+SFGVVL E+
Sbjct: 200 MSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 129/285 (45%), Gaps = 40/285 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ ++HT +AVK + S+ +L E + L H
Sbjct: 23 LGAGQFGEVWMATYNKHTK----------VAVKTMKPGSMSVE-AFLAEANVMKTLQHDK 71
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LVKL + + ++ EFM KGSL + L ++ QPL I + A+G+A++
Sbjct: 72 LVKLHA-VVTKEPIYIITEFMAKGSLLDFL-KSDEGSKQPLPKLIDFSAQI--AEGMAFI 127
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPE 253
++ I+RD + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 128 --EQRNYIHRDLRAANILVSASLVCKIADFGLAR---VIEDNEYTAREGAKFPIKWTAPE 182
Query: 254 YMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYL-QSKRRIFQVM 312
+ G T KSDV+SFG++L+E+++ R+ PY S + + +
Sbjct: 183 AINFGSFTIKSDVWSFGILLMEIVTYGRI-----------------PYPGMSNPEVIRAL 225
Query: 313 DARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQ 357
+ + + ++C N P+ RPT + + L+ +
Sbjct: 226 ERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFE 270
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 135/327 (41%), Gaps = 74/327 (22%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-------NQESLQGHLEW 121
N + LG G FG V ++ + + + +AVK L +E+L L+
Sbjct: 32 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 87
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYI-------- 173
++ HLGQ H N+V L+G C L++ E+ G L N L R + +
Sbjct: 88 MS---HLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQ 142
Query: 174 ----------QPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLS 223
+PL + + A+G+A+L S I+RD N+LL + AK+
Sbjct: 143 DPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC--IHRDVAARNVLLTNGHVAKIG 200
Query: 224 DFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS----- 278
DFGLA+D S V + APE + T +SDV+S+G++L E+ S
Sbjct: 201 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 260
Query: 279 --GRRVIDKNRPSREHNLI----EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLA 332
G V S+ + L+ + A+P K I+ +M A
Sbjct: 261 YPGILV-----NSKFYKLVKDGYQMAQPAFAPK-NIYSIMQA------------------ 296
Query: 333 IKCLSNEPKFRPTMDEVVKAL-EQIQD 358
C + EP RPT ++ L EQ Q+
Sbjct: 297 --CWALEPTHRPTFQQICSFLQEQAQE 321
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 107/212 (50%), Gaps = 28/212 (13%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLN--QESLQGHLEWLTEIKHLGQLY 132
+G G FG V+KG W + +AVK LN + Q + E+ L +
Sbjct: 32 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 78
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASY-IQPLSWTIRMKVALGAAKG 191
H N++ +GY +V ++ SL +HL + + ++ L + +A A+G
Sbjct: 79 HVNILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARG 132
Query: 192 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 251
+ YLH+ +I+RD K++NI L + K+ DFGLA + S SH ++ G+ + A
Sbjct: 133 MDYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 190
Query: 252 PEYMA---TGHLTAKSDVYSFGVVLLEMLSGR 280
PE + + + +SDVY+FG+VL E+++G+
Sbjct: 191 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 15/165 (9%)
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWT 179
+L E + QL H NLV+L+G +E+ L +V E+M KGSL ++L G S L
Sbjct: 52 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV---LGGD 108
Query: 180 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 239
+K +L + + YL + ++RD N+L+ + AK+SDFGL K+
Sbjct: 109 CLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEAS------- 159
Query: 240 STRVMGT--YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRV 282
ST+ G + APE + + KSDV+SFG++L E+ S RV
Sbjct: 160 STQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRV 204
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G P T +A+K +N+ S++ +E+L E + +
Sbjct: 33 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR-----TGASYIQPLSWTIRMKVALGAA 189
++V+L+G + L++ E M +G L+++L + P S + +++A A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 148
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
G+AYL+++K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 149 DGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 206
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEM 276
+PE + G T SDV+SFGVVL E+
Sbjct: 207 MSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 128/282 (45%), Gaps = 40/282 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ ++HT +AVK + S+ +L E + L H
Sbjct: 196 LGAGQFGEVWMATYNKHTK----------VAVKTMKPGSMSVE-AFLAEANVMKTLQHDK 244
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LVKL + + ++ EFM KGSL + L ++ QPL I + A+G+A++
Sbjct: 245 LVKLHA-VVTKEPIYIITEFMAKGSLLDFL-KSDEGSKQPLPKLIDFSAQI--AEGMAFI 300
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPE 253
++ I+RD + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 301 --EQRNYIHRDLRAANILVSASLVCKIADFGLAR---VIEDNEYTAREGAKFPIKWTAPE 355
Query: 254 YMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYL-QSKRRIFQVM 312
+ G T KSDV+SFG++L+E+++ R+ PY S + + +
Sbjct: 356 AINFGSFTIKSDVWSFGILLMEIVTYGRI-----------------PYPGMSNPEVIRAL 398
Query: 313 DARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE 354
+ + + ++C N P+ RPT + + L+
Sbjct: 399 ERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 440
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G P T +A+K +N+ S++ +E+L E + +
Sbjct: 27 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR-----TGASYIQPLSWTIRMKVALGAA 189
++V+L+G + L++ E M +G L+++L + P S + +++A A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
G+AYL+++K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 143 DGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 200
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEM 276
+PE + G T SDV+SFGVVL E+
Sbjct: 201 MSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 22/209 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 29 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPD-AFLAEANLMKQLQHQR 77
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L ++ ++ E+M GSL + F S I+ L+ + +A A+G+A++
Sbjct: 78 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFI 133
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPE 253
++ I+RD + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 134 --EERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXTAREGAKFPIKWTAPE 188
Query: 254 YMATGHLTAKSDVYSFGVVLLEMLSGRRV 282
+ G T KSDV+SFG++L E+++ R+
Sbjct: 189 AINYGTFTIKSDVWSFGILLTEIVTHGRI 217
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 104/211 (49%), Gaps = 30/211 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-NQESLQGHLEWLTEIKHLGQLYHP 134
+G+G FG V G G +AVK + N + Q +L E + QL H
Sbjct: 14 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATAQA---FLAEASVMTQLRHS 59
Query: 135 NLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
NLV+L+G +E+ L +V E+M KGSL ++L G S L +K +L + +
Sbjct: 60 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV---LGGDCLLKFSLDVCEAME 116
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAA 251
YL + ++RD N+L+ + AK+SDFGL K+ ST+ G + A
Sbjct: 117 YLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTA 167
Query: 252 PEYMATGHLTAKSDVYSFGVVLLEMLSGRRV 282
PE + + KSDV+SFG++L E+ S RV
Sbjct: 168 PEALREKKFSTKSDVWSFGILLWEIYSFGRV 198
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 134/292 (45%), Gaps = 46/292 (15%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ R + LG+G FG V+ G + T +A+K L ++ +L E + +
Sbjct: 268 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPE-AFLQEAQVM 316
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
+L H LV+L + ++ +V E+M KGSL + L Y++ L + M +
Sbjct: 317 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLR-LPQLVDMAAQI-- 372
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY- 247
A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+ + + R +
Sbjct: 373 ASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFP 427
Query: 248 -GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKR 306
+ APE G T KSDV+SFG++L E+ + RV PY
Sbjct: 428 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN 470
Query: 307 RIFQVMDARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALE 354
R +V+D ++E Y + + L +C EP+ RPT + + LE
Sbjct: 471 R--EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 519
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L++ + MP G L H G+ Y+ L+W +++
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 130
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFGLAK + + +
Sbjct: 131 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 182
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 183 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G P T +A+K +N+ S++ +E+L E + +
Sbjct: 55 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 110
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR-----TGASYIQPLSWTIRMKVALGAA 189
++V+L+G + L++ E M +G L+++L + P S + +++A A
Sbjct: 111 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 170
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
G+AYL+++K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 171 DGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 228
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEM 276
+PE + G T SDV+SFGVVL E+
Sbjct: 229 MSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 129/319 (40%), Gaps = 55/319 (17%)
Query: 43 PRTEGEILLGSNIKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTG 102
P E L S K+ + A +F LG+G FG V Y +
Sbjct: 9 PENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNV---------YLAREKQSK 59
Query: 103 MVIAVKRLNQESLQG---HLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKG 159
++A+K L + L+ + E++ L HPN+++L GY + L+ E+ P G
Sbjct: 60 FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 119
Query: 160 SLENHLFRTG-------ASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNI 212
++ L + A+YI L A L+Y HS +VI+RD K N+
Sbjct: 120 TVYRELQKLSKFDEQRTATYITEL------------ANALSYCHSK--RVIHRDIKPENL 165
Query: 213 LLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVV 272
LL K++DFG + P+ + T + GT Y PE + K D++S GV+
Sbjct: 166 LLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 221
Query: 273 LLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLA 332
E L G+ + N + + Y + R F D EG L + L
Sbjct: 222 CYEFLVGKPPFEAN---------TYQETYKRISRVEFTFPDFVTEGARDLISRL------ 266
Query: 333 IKCLSNEPKFRPTMDEVVK 351
L + P RP + EV++
Sbjct: 267 ---LKHNPSQRPMLREVLE 282
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 79
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L+ + MP G L H G+ Y+ L+W +++
Sbjct: 80 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 136
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFGLAK + + +
Sbjct: 137 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 188
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 189 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL---QGHLEWLTE 124
++ R LG+G FG V +G D AP+ G + +AVK L + L + +++ E
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLSQPEAMDDFIRE 65
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR-TGASYIQPLSWTIRMK 183
+ + L H NL++L G L ++ V E P GSL + L + G + LS +
Sbjct: 66 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS-----R 119
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
A+ A+G+ YL S + I+RD N+LL K+ DFGL + P +V
Sbjct: 120 YAVQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 177
Query: 244 MGT-YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ + APE + T + SD + FGV L EM +
Sbjct: 178 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L++ + MP G L H G+ Y+ L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 128
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFGLAK + + +
Sbjct: 129 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 180
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 32/223 (14%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT 123
K + ++F+ LG G FG V + G A+K L +E + L
Sbjct: 2 KYSLQDFQILRTLGTGSFGRV---------HLIRSRHNGRYYAMKVLKKEIVVR----LK 48
Query: 124 EIKH-------LGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPL 176
+++H L + HP ++++ G + ++ +++ G L + L R + P+
Sbjct: 49 QVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFS-LLRKSQRFPNPV 107
Query: 177 SWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ 236
+ +V L L YLHS +IYRD K NILLD N + K++DFG AK P
Sbjct: 108 AKFYAAEVCLA----LEYLHS--KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD--- 158
Query: 237 SHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
V+ + GT Y APE ++T D +SFG+++ EML+G
Sbjct: 159 --VTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 22/209 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 27 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPD-AFLAEANLMKQLQHQR 75
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L ++ ++ E+M GSL + F S I+ L+ + +A A+G+A++
Sbjct: 76 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFI 131
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPE 253
++ I+RD + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 132 --EERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXTAREGAKFPIKWTAPE 186
Query: 254 YMATGHLTAKSDVYSFGVVLLEMLSGRRV 282
+ G T KSDV+SFG++L E+++ R+
Sbjct: 187 AINYGTFTIKSDVWSFGILLTEIVTHGRI 215
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 22/209 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 30 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPD-AFLAEANLMKQLQHQR 78
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L ++ ++ E+M GSL + F S I+ L+ + +A A+G+A++
Sbjct: 79 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFI 134
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPE 253
++ I+RD + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 135 --EERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXTAREGAKFPIKWTAPE 189
Query: 254 YMATGHLTAKSDVYSFGVVLLEMLSGRRV 282
+ G T KSDV+SFG++L E+++ R+
Sbjct: 190 AINYGTFTIKSDVWSFGILLTEIVTHGRI 218
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 135/318 (42%), Gaps = 65/318 (20%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-------NQESLQGHLEW 121
N + LG G FG V ++ + + + +AVK L +E+L L+
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQ 174
++ HLGQ H N+V L+G C L++ E+ G L N L R A I
Sbjct: 103 MS---HLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIA 157
Query: 175 PLSWTIR--MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGP 232
+ + R + + A+G+A+L S I+RD N+LL + AK+ DFGLA+D
Sbjct: 158 NSTLSTRDLLHFSSQVAQGMAFLASKNC--IHRDVAARNVLLTNGHVAKIGDFGLARDIM 215
Query: 233 TGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS-------GRRVIDK 285
S V + APE + T +SDV+S+G++L E+ S G V
Sbjct: 216 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV--- 272
Query: 286 NRPSREHNLI----EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPK 341
S+ + L+ + A+P K I+ +M A C + EP
Sbjct: 273 --NSKFYKLVKDGYQMAQPAFAPK-NIYSIMQA--------------------CWALEPT 309
Query: 342 FRPTMDEVVKAL-EQIQD 358
RPT ++ L EQ Q+
Sbjct: 310 HRPTFQQICSFLQEQAQE 327
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 22/209 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 23 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPD-AFLAEANLMKQLQHQR 71
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L ++ ++ E+M GSL + F S I+ L+ + +A A+G+A++
Sbjct: 72 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFI 127
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPE 253
++ I+RD + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 128 --EERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXTAREGAKFPIKWTAPE 182
Query: 254 YMATGHLTAKSDVYSFGVVLLEMLSGRRV 282
+ G T KSDV+SFG++L E+++ R+
Sbjct: 183 AINYGTFTIKSDVWSFGILLTEIVTHGRI 211
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 22/209 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 21 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPD-AFLAEANLMKQLQHQR 69
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L ++ ++ E+M GSL + F S I+ L+ + +A A+G+A++
Sbjct: 70 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFI 125
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPE 253
++ I+RD + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 126 --EERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXTAREGAKFPIKWTAPE 180
Query: 254 YMATGHLTAKSDVYSFGVVLLEMLSGRRV 282
+ G T KSDV+SFG++L E+++ R+
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRI 209
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 22/209 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 31 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPD-AFLAEANLMKQLQHQR 79
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L ++ ++ E+M GSL + F S I+ L+ + +A A+G+A++
Sbjct: 80 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFI 135
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPE 253
++ I+RD + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 136 --EERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEYTAREGAKFPIKWTAPE 190
Query: 254 YMATGHLTAKSDVYSFGVVLLEMLSGRRV 282
+ G T KSDV+SFG++L E+++ R+
Sbjct: 191 AINYGTFTIKSDVWSFGILLTEIVTHGRI 219
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L++ + MP G L H G+ Y+ L+W +++
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 127
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFGLAK + + +
Sbjct: 128 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 179
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 180 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 14/214 (6%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
R+ + S LG+G FG V + Y P TG ++AVK+L ++ EI+
Sbjct: 10 RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 64
Query: 128 LGQLYHPNLVKL--IGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
L L+ +VK + Y LV E++P G L + L R A L + + +
Sbjct: 65 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYS 120
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV-M 244
KG+ YL S + ++RD NIL++ + K++DFGLAK P +V
Sbjct: 121 SQICKGMEYLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 178
Query: 245 GTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ APE ++ + +SDV+SFGVVL E+ +
Sbjct: 179 SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L++ + MP G L H G+ Y+ L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 126
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFGLAK + + +
Sbjct: 127 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 20/215 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+K RL+ E+ + EI
Sbjct: 8 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 58
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
L +L HPN+VKL+ ++ LV+EF+ L+ + AS + + +
Sbjct: 59 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM---DASALTGIPLPLIKSYLF 114
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ G T + T
Sbjct: 115 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVT 170
Query: 247 YGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
Y APE + + + D++S G + EM++ R
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 14/214 (6%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
R+ + S LG+G FG V + Y P TG ++AVK+L ++ EI+
Sbjct: 11 RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 65
Query: 128 LGQLYHPNLVKL--IGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
L L+ +VK + Y LV E++P G L + L R A L + + +
Sbjct: 66 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYS 121
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV-M 244
KG+ YL S + ++RD NIL++ + K++DFGLAK P +V
Sbjct: 122 SQICKGMEYLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 179
Query: 245 GTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ APE ++ + +SDV+SFGVVL E+ +
Sbjct: 180 SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 23/219 (10%)
Query: 76 LGEGGFGCVFKGW---IDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
LGEG FG V ID+ +P + +AVK L ++ + L + ++E++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 132 -YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---TGASYI--------QPLSWT 179
H N++ L+G C +D ++ E+ KG+L +L G Y + +++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 180 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 239
+ A+G+ YL S K I+RD N+L+ N K++DFGLA+D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC--IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+T + APE + T +SDV+SFGV++ E+ +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L++ + MP G L H G+ Y+ L+W +++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 129
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFGLAK + + +
Sbjct: 130 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 24/210 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 22 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPD-AFLAEANLMKQLQHQR 70
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L ++ ++ E+M GSL + F S I+ L+ + +A A+G+A++
Sbjct: 71 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFI 126
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRVMGTYGYAAP 252
++ I+RD + +NIL+ + K++DFGLA+ D ++ + + AP
Sbjct: 127 --EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI----KWTAP 180
Query: 253 EYMATGHLTAKSDVYSFGVVLLEMLSGRRV 282
E + G T KSDV+SFG++L E+++ R+
Sbjct: 181 EAINYGTFTIKSDVWSFGILLTEIVTHGRI 210
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 127/277 (45%), Gaps = 37/277 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN-QESLQGHLEWLTEIKHLGQLYHP 134
+G+G FG VFKG ID T V+A+K ++ +E+ + EI L Q
Sbjct: 31 IGKGSFGEVFKG-IDNRTQ--------QVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSS 81
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAY 194
+ K G L+ ++ E++ GS + L R G +K L KGL Y
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGGSALD-LLRAGP--FDEFQIATMLKEIL---KGLDY 135
Query: 195 LHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEY 254
LHS+K I+RD K +N+LL + KL+DFG+A T +Q +T V GT + APE
Sbjct: 136 LHSEKK--IHRDIKAANVLLSEQGDVKLADFGVAGQ-LTDTQIKRNTFV-GTPFWMAPEV 191
Query: 255 MATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDA 314
+ +K+D++S G+ +E+ G P R LI P
Sbjct: 192 IQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP-------------P 238
Query: 315 RIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ G ++ + K + A CL+ +P FRPT E++K
Sbjct: 239 TLVGDFT--KSFKEFIDA--CLNKDPSFRPTAKELLK 271
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 20/218 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 52
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKS 108
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ G T
Sbjct: 109 YLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHE 164
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
+ T Y APE + + + D++S G + EM++ R
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L +L HPN+VKL+ ++ LV+EF+ S++ F AS + + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKF-MDASALTGIPLPLIKS 110
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 111 YLFQLLQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
T Y APE + + + D++S G + EM++ R
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L+ + MP G L H G+ Y+ L+W +++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 133
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFGLAK + + +
Sbjct: 134 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 185
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 142/297 (47%), Gaps = 58/297 (19%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
LG G FG V G W ++ +AVK + + S+ E+ E + + +L HP
Sbjct: 16 LGSGQFGVVKLGKWKGQYD-----------VAVKMIKEGSMSED-EFFQEAQTMMKLSHP 63
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAY 194
LVK G C ++ +V E++ G L N+L R+ ++P + +++ +G+A+
Sbjct: 64 KLVKFYGVCSKEYPIYIVTEYISNGCLLNYL-RSHGKGLEP---SQLLEMCYDVCEGMAF 119
Query: 195 LHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT---YGYAA 251
L S + I+RD N L+D + K+SDFG+ + +VS+ +GT ++A
Sbjct: 120 LESH--QFIHRDLAARNCLVDRDLCVKVSDFGMTR--YVLDDQYVSS--VGTKFPVKWSA 173
Query: 252 PEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKN-------RPSREHNLIEWAKPYLQ 303
PE ++KSDV++FG+++ E+ S G+ D + S+ H L +P+L
Sbjct: 174 PEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLY---RPHLA 230
Query: 304 SKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDTN 360
S I+Q+M YS C P+ RPT +++ ++E +++ +
Sbjct: 231 SD-TIYQIM-------YS-------------CWHELPEKRPTFQQLLSSIEPLREKD 266
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 122/296 (41%), Gaps = 55/296 (18%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWL 122
A +F LG+G FG V Y + ++A+K L + L+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQP 175
E++ L HPN+++L GY + L+ E+ P+G + L + A+YI
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE 121
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L A L+Y HS +VI+RD K N+LL K++DFG + P+
Sbjct: 122 L------------ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 167
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 168 R----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------- 214
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ + Y + R F D EG L + L L + P RP + EV++
Sbjct: 215 TYQETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPMLREVLE 261
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 151/331 (45%), Gaps = 44/331 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
R VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 18 ELRKVKVLGSGAFGTVYKGIWI------PDGENVKIPVAIKVLRENTSPKANKEILDEAY 71
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLF----RTGASYIQPLSWTIRM 182
+ + P + +L+G CL +L V + MP G L +H+ R G+ + L+W +++
Sbjct: 72 VMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDL--LNWCMQI 128
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG++YL + ++++RD N+L+ + K++DFGLA+ + +
Sbjct: 129 ------AKGMSYL--EDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADG 180
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKNRPSREHNLIEWAKPY 301
+ A E + T +SDV+S+GV + E+++ G + D P+RE
Sbjct: 181 GKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD-GIPARE------IPDL 233
Query: 302 LQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI-QDTN 360
L+ R+ Q I+ ++ +KC + + RP E+V ++ +D
Sbjct: 234 LEKGERLPQPPICTID----------VYMIMVKCWMIDSECRPRFRELVSEFSRMARDPQ 283
Query: 361 DAGVSRDESLQNSD--RSTYKRKGLNENGQG 389
V ++E L + ST+ R L ++ G
Sbjct: 284 RFVVIQNEDLGPASPLDSTFYRSLLEDDDMG 314
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 14/214 (6%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
R+ + S LG+G FG V + Y P TG ++AVK+L ++ EI+
Sbjct: 7 RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 61
Query: 128 LGQLYHPNLVKL--IGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
L L+ +VK + Y LV E++P G L + L R A L + + +
Sbjct: 62 LKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYS 117
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV-M 244
KG+ YL S + ++RD NIL++ + K++DFGLAK P V
Sbjct: 118 SQICKGMEYLGSRRC--VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQ 175
Query: 245 GTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ APE ++ + +SDV+SFGVVL E+ +
Sbjct: 176 SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+K RL+ E+ + EI
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 54
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLF 110
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ G T + T
Sbjct: 111 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVT 166
Query: 247 YGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
Y APE + + + D++S G + EM++ R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L+ + MP G L H G+ Y+ L+W +++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 129
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFGLAK + + +
Sbjct: 130 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+K RL+ E+ + EI
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 53
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLF 109
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ G T + T
Sbjct: 110 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVT 165
Query: 247 YGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
Y APE + + + D++S G + EM++ R
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L++ + MP G L H G+ Y+ L+W +++
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYL--LNWCVQI 127
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFGLAK + + +
Sbjct: 128 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 179
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 180 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+K RL+ E+ + EI
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 53
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLF 109
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ G T + T
Sbjct: 110 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVT 165
Query: 247 YGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
Y APE + + + D++S G + EM++ R
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+K RL+ E+ + EI
Sbjct: 11 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 61
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 62 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLF 117
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ G T + T
Sbjct: 118 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVT 173
Query: 247 YGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
Y APE + + + D++S G + EM++ R
Sbjct: 174 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+K RL+ E+ + EI
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 54
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLF 110
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ G T + T
Sbjct: 111 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVT 166
Query: 247 YGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
Y APE + + + D++S G + EM++ R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L+ + MP G L H G+ Y+ L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 126
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFGLAK + + +
Sbjct: 127 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 75
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L+ + MP G L H G+ Y+ L+W +++
Sbjct: 76 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 132
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFGLAK + + +
Sbjct: 133 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 184
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 185 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 22/209 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 27 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPD-AFLAEANLMKQLQHQR 75
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L ++ ++ E+M GSL + F S I+ L+ + +A A+G+A++
Sbjct: 76 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFI 131
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPE 253
++ I+RD + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 132 --EERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEYTAREGAKFPIKWTAPE 186
Query: 254 YMATGHLTAKSDVYSFGVVLLEMLSGRRV 282
+ G T KSDV+SFG++L E+++ R+
Sbjct: 187 AINYGTFTIKSDVWSFGILLTEIVTHGRI 215
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL--EWLTEIKHLGQLYH 133
LGE FG V+KG H + PA +A+K L ++ +G L E+ E +L H
Sbjct: 17 LGEDRFGKVYKG----HLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQH 71
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLF--------------RTGASYIQPLSWT 179
PN+V L+G +D +++ + G L L RT S ++P +
Sbjct: 72 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF- 130
Query: 180 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 239
+ + A G+ YL S V+++D T N+L+ N K+SD GL ++ +
Sbjct: 131 --VHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKL 186
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ + APE + G + SD++S+GVVL E+ S
Sbjct: 187 LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L+ + MP G L H G+ Y+ L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 126
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFGLAK + + +
Sbjct: 127 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 133/318 (41%), Gaps = 65/318 (20%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-------NQESLQGHLEW 121
N + LG G FG V ++ + + + +AVK L +E+L L+
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIR 181
++ HLGQ H N+V L+G C L++ E+ G L N L R ++ I
Sbjct: 103 MS---HLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIA 157
Query: 182 ---------MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGP 232
+ + A+G+A+L S I+RD N+LL + AK+ DFGLA+D
Sbjct: 158 NSTASTRDLLHFSSQVAQGMAFLASKNC--IHRDVAARNVLLTNGHVAKIGDFGLARDIM 215
Query: 233 TGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS-------GRRVIDK 285
S V + APE + T +SDV+S+G++L E+ S G V
Sbjct: 216 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV--- 272
Query: 286 NRPSREHNLI----EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPK 341
S+ + L+ + A+P K I+ +M A C + EP
Sbjct: 273 --NSKFYKLVKDGYQMAQPAFAPK-NIYSIMQA--------------------CWALEPT 309
Query: 342 FRPTMDEVVKAL-EQIQD 358
RPT ++ L EQ Q+
Sbjct: 310 HRPTFQQICSFLQEQAQE 327
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 22/209 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 26 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPD-AFLAEANLMKQLQHQR 74
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L ++ ++ E+M GSL + F S I+ L+ + +A A+G+A++
Sbjct: 75 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFI 130
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPE 253
++ I+RD + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 131 --EERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEYTAREGAKFPIKWTAPE 185
Query: 254 YMATGHLTAKSDVYSFGVVLLEMLSGRRV 282
+ G T KSDV+SFG++L E+++ R+
Sbjct: 186 AINYGTFTIKSDVWSFGILLTEIVTHGRI 214
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L+ + MP G L H G+ Y+ L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 128
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFGLAK + + +
Sbjct: 129 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 180
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L+ + MP G L H G+ Y+ L+W +++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 129
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFGLAK + + +
Sbjct: 130 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L+ + MP G L H G+ Y+ L+W +++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 129
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFGLAK + + +
Sbjct: 130 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 52
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L +L HPN+VKL+ ++ LV+EF+ S++ F AS + + +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKF-MDASALTGIPLPLIKS 108
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 109 YLFQLLQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
T Y APE + + + D++S G + EM++ R
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+K RL+ E+ + EI
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 54
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLF 110
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ G T + T
Sbjct: 111 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVT 166
Query: 247 YGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
Y APE + + + D++S G + EM++ R
Sbjct: 167 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL--EWLTEIKHLGQLYH 133
LGE FG V+KG H + PA +A+K L ++ +G L E+ E +L H
Sbjct: 34 LGEDRFGKVYKG----HLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQH 88
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLF--------------RTGASYIQPLSWT 179
PN+V L+G +D +++ + G L L RT S ++P +
Sbjct: 89 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF- 147
Query: 180 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 239
+ + A G+ YL S V+++D T N+L+ N K+SD GL ++ +
Sbjct: 148 --VHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKL 203
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ + APE + G + SD++S+GVVL E+ S
Sbjct: 204 LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 24/210 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 21 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPD-AFLAEANLMKQLQHQR 69
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L ++ ++ E+M GSL + F S I+ L+ + +A A+G+A++
Sbjct: 70 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFI 125
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRVMGTYGYAAP 252
++ I+RD + +NIL+ + K++DFGLA+ D ++ + + AP
Sbjct: 126 --EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI----KWTAP 179
Query: 253 EYMATGHLTAKSDVYSFGVVLLEMLSGRRV 282
E + G T KSDV+SFG++L E+++ R+
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRI 209
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 23/219 (10%)
Query: 76 LGEGGFGCVFKGW---IDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
LGEG FG V ID+ +P + +AVK L ++ + L + ++E++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 132 -YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL-----------FRTGASYIQPLSWT 179
H N++ L+G C +D ++ E+ KG+L +L + + +++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 180 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 239
+ A+G+ YL S K I+RD N+L+ N K++DFGLA+D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC--IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+T + APE + T +SDV+SFGV++ E+ +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 135/320 (42%), Gaps = 67/320 (20%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-------NQESLQGHLEW 121
N + LG G FG V ++ + + + +AVK L +E+L L+
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRT---GASYI----- 173
++ HLGQ H N+V L+G C L++ E+ G L N L R G Y
Sbjct: 103 MS---HLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSH 157
Query: 174 ---QPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 230
+ LS + + A+G+A+L S I+RD N+LL + AK+ DFGLA+D
Sbjct: 158 NPEEQLSSRDLLHFSSQVAQGMAFLASKNC--IHRDVAARNVLLTNGHVAKIGDFGLARD 215
Query: 231 GPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS-------GRRVI 283
S V + APE + T +SDV+S+G++L E+ S G V
Sbjct: 216 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV- 274
Query: 284 DKNRPSREHNLI----EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNE 339
S+ + L+ + A+P K I+ +M A C + E
Sbjct: 275 ----NSKFYKLVKDGYQMAQPAFAPK-NIYSIMQA--------------------CWALE 309
Query: 340 PKFRPTMDEVVKAL-EQIQD 358
P RPT ++ L EQ Q+
Sbjct: 310 PTHRPTFQQICSFLQEQAQE 329
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL---QGHLEWLTE 124
++ R LG+G FG V +G D AP+ G + +AVK L + L + +++ E
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLSQPEAMDDFIRE 71
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR-TGASYIQPLSWTIRMK 183
+ + L H NL++L G L ++ V E P GSL + L + G + LS +
Sbjct: 72 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS-----R 125
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
A+ A+G+ YL S + I+RD N+LL K+ DFGL + P +V
Sbjct: 126 YAVQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 183
Query: 244 MGT-YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ + APE + T + SD + FGV L EM +
Sbjct: 184 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 14/214 (6%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
R+ + S LG+G FG V + Y P TG ++AVK+L ++ EI+
Sbjct: 23 RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 77
Query: 128 LGQLYHPNLVKL--IGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
L L+ +VK + Y LV E++P G L + L R A L + + +
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYS 133
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV-M 244
KG+ YL S + ++RD NIL++ + K++DFGLAK P +V
Sbjct: 134 SQICKGMEYLGSRRC--VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 191
Query: 245 GTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ APE ++ + +SDV+SFGVVL E+ +
Sbjct: 192 SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+K RL+ E+ + EI
Sbjct: 11 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 61
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 62 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLF 117
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ G T + T
Sbjct: 118 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVT 173
Query: 247 YGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
Y APE + + + D++S G + EM++ R
Sbjct: 174 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL---QGHLEWLTE 124
++ R LG+G FG V +G D AP+ G + +AVK L + L + +++ E
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR-TGASYIQPLSWTIRMK 183
+ + L H NL++L G L ++ V E P GSL + L + G + LS +
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS-----R 115
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
A+ A+G+ YL S + I+RD N+LL K+ DFGL + P +V
Sbjct: 116 YAVQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 173
Query: 244 MGT-YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ + APE + T + SD + FGV L EM +
Sbjct: 174 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 22/209 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 16 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPD-AFLAEANLMKQLQHQR 64
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L ++ ++ E+M GSL + F S I+ L+ + +A A+G+A++
Sbjct: 65 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFI 120
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPE 253
++ I+RD + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 121 --EERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEYTAREGAKFPIKWTAPE 175
Query: 254 YMATGHLTAKSDVYSFGVVLLEMLSGRRV 282
+ G T KSDV+SFG++L E+++ R+
Sbjct: 176 AINYGTFTIKSDVWSFGILLTEIVTHGRI 204
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 94
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L+ + MP G L H G+ Y+ L+W +++
Sbjct: 95 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 151
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFGLAK + + +
Sbjct: 152 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 203
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 204 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 135/295 (45%), Gaps = 46/295 (15%)
Query: 73 DSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQ 130
D V+G+G FG V+ G +ID+ + A+K L++ + +E +L E +
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQ-------NRIQCAIKSLSRITEMQQVEAFLREGLLMRG 78
Query: 131 LYHPNLVKLIGYCLEDD---HRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALG 187
L HPN++ LIG L + H LL Y M G L R+ + T++ ++ G
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLLPY--MCHGDLLQ-FIRSPQR-----NPTVKDLISFG 130
Query: 188 --AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD----GPTGSQSHVST 241
A+G+ YL + K ++RD N +LD ++ K++DFGLA+D Q H
Sbjct: 131 LQVARGMEYL--AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHA 188
Query: 242 RVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPY 301
R+ + A E + T T KSDV+SFGV+L E+L+ + P H +
Sbjct: 189 RL--PVKWTALESLQTYRFTTKSDVWSFGVLLWELLT------RGAPPYRHIDPFDLTHF 240
Query: 302 LQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
L RR+ Q +Y + + +C +P RPT +V +EQI
Sbjct: 241 LAQGRRLPQ-------PEYCPDSLYQVMQ---QCWEADPAVRPTFRVLVGEVEQI 285
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 107/212 (50%), Gaps = 28/212 (13%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLN--QESLQGHLEWLTEIKHLGQLY 132
+G G FG V+KG W + +AVK LN + Q + E+ L +
Sbjct: 20 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 66
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASY-IQPLSWTIRMKVALGAAKG 191
H N++ +GY + +V ++ SL +HL + + ++ L + +A A+G
Sbjct: 67 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARG 120
Query: 192 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 251
+ YLH+ +I+RD K++NI L + K+ DFGLA S SH ++ G+ + A
Sbjct: 121 MDYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 178
Query: 252 PEYMA---TGHLTAKSDVYSFGVVLLEMLSGR 280
PE + + + +SDVY+FG+VL E+++G+
Sbjct: 179 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 36/216 (16%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLN-----QESLQGHLEWLTEIKHLG 129
+G G FG V+KG W + +AVK LN + LQ + E+ L
Sbjct: 44 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQA---FKNEVGVLR 87
Query: 130 QLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKVALG 187
+ H N++ +GY + +V ++ SL +HL T I+ + +A
Sbjct: 88 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQ 140
Query: 188 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 247
A+G+ YLH+ +I+RD K++NI L + K+ DFGLA + S SH ++ G+
Sbjct: 141 TAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI 198
Query: 248 GYAAPEYMATGH---LTAKSDVYSFGVVLLEMLSGR 280
+ APE + + +SDVY+FG+VL E+++G+
Sbjct: 199 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L+ + MP G L H G+ Y+ L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYL--LNWCVQI 126
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFGLAK + + +
Sbjct: 127 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 22/209 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 21 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPD-AFLAEANLMKQLQHQR 69
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L ++ ++ E+M GSL + F S I+ L+ + +A A+G+A++
Sbjct: 70 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFI 125
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPE 253
++ I+RD + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 126 --EERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEYTAREGAKFPIKWTAPE 180
Query: 254 YMATGHLTAKSDVYSFGVVLLEMLSGRRV 282
+ G T KSDV+SFG++L E+++ R+
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRI 209
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 36/216 (16%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLN-----QESLQGHLEWLTEIKHLG 129
+G G FG V+KG W + +AVK LN + LQ + E+ L
Sbjct: 36 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQA---FKNEVGVLR 79
Query: 130 QLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKVALG 187
+ H N++ +GY + +V ++ SL +HL T I+ + +A
Sbjct: 80 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQ 132
Query: 188 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 247
A+G+ YLH+ +I+RD K++NI L + K+ DFGLA + S SH ++ G+
Sbjct: 133 TAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI 190
Query: 248 GYAAPEYMAT---GHLTAKSDVYSFGVVLLEMLSGR 280
+ APE + + +SDVY+FG+VL E+++G+
Sbjct: 191 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL---QGHLEWLTE 124
++ R LG+G FG V +G D AP+ G + +AVK L + L + +++ E
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLSQPEAMDDFIRE 65
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR-TGASYIQPLSWTIRMK 183
+ + L H NL++L G L ++ V E P GSL + L + G + LS +
Sbjct: 66 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS-----R 119
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
A+ A+G+ YL S + I+RD N+LL K+ DFGL + P +V
Sbjct: 120 YAVQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 177
Query: 244 MGT-YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ + APE + T + SD + FGV L EM +
Sbjct: 178 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL---QGHLEWLTE 124
++ R LG+G FG V +G D AP+ G + +AVK L + L + +++ E
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR-TGASYIQPLSWTIRMK 183
+ + L H NL++L G L ++ V E P GSL + L + G + LS +
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS-----R 115
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
A+ A+G+ YL S + I+RD N+LL K+ DFGL + P +V
Sbjct: 116 YAVQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 173
Query: 244 MGT-YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ + APE + T + SD + FGV L EM +
Sbjct: 174 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 63
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L+ + MP G L H G+ Y+ L+W +++
Sbjct: 64 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 120
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFGLAK + + +
Sbjct: 121 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 172
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 173 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 20/218 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 51
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L +L HPN+VKL+ ++ LV+EF+ + L++ + AS + + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFM---DASALTGIPLPLIKS 107
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 108 YLFQLLQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
T Y APE + + + D++S G + EM++ R
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 104/207 (50%), Gaps = 12/207 (5%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G P T +A+K +N+ S++ +E+L E + +
Sbjct: 20 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR-----TGASYIQPLSWTIRMKVALGAA 189
++V+L+G + L++ E M +G L+++L + P S + +++A A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
G+AYL+++K ++RD N + ++ K+ DFG+ +D + + +
Sbjct: 136 DGMAYLNANK--FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 193
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEM 276
+PE + G T SDV+SFGVVL E+
Sbjct: 194 MSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 53
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L +L HPN+VKL+ ++ LV+EF+ S++ F AS + + +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDF-MDASALTGIPLPLIKS 109
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 110 YLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
T Y APE + + + D++S G + EM++ R
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L +L HPN+VKL+ ++ LV+EF+ S++ F AS + + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDF-MDASALTGIPLPLIKS 110
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 111 YLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
T Y APE + + + D++S G + EM++ R
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 127/304 (41%), Gaps = 41/304 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES-LQGHLEWLTEIKHLGQL-YH 133
LG G FG V ++ Y + M +AVK L + L ++E+K L L H
Sbjct: 31 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 86
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRM----------- 182
N+V L+G C L++ E+ G L N L R S+I + M
Sbjct: 87 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146
Query: 183 --KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ AKG+A+L S I+RD NILL K+ DFGLA+D S V
Sbjct: 147 LLSFSYQVAKGMAFLASKNC--IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 241 TRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRP--SREHNLIEWA 298
+ APE + T +SDV+S+G+ L E+ S P S+ + +I+
Sbjct: 205 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 264
Query: 299 KPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE-QIQ 357
L + ++ D +KT C +P RPT ++V+ +E QI
Sbjct: 265 FRMLSPEHAPAEMYD-----------IMKT------CWDADPLKRPTFKQIVQLIEKQIS 307
Query: 358 DTND 361
++ +
Sbjct: 308 ESTN 311
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 127/311 (40%), Gaps = 55/311 (17%)
Query: 51 LGSNIKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL 110
L S K+ + A +F LG+G FG V Y + ++A+K L
Sbjct: 8 LASKQKNEESKKRQWALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVL 58
Query: 111 NQESLQG---HLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR 167
+ L+ + E++ L HPN+++L GY + L+ E+ P G++ L +
Sbjct: 59 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 118
Query: 168 TG-------ASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA 220
A+YI L A L+Y HS +VI+RD K N+LL
Sbjct: 119 LSKFDEQRTATYITEL------------ANALSYCHSK--RVIHRDIKPENLLLGSAGEL 164
Query: 221 KLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
K++DFG + P+ + T + GT Y PE + K D++S GV+ E L G+
Sbjct: 165 KIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
Query: 281 RVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEP 340
+ N + + Y + R F D EG L + L L + P
Sbjct: 221 PPFEAN---------TYQETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNP 262
Query: 341 KFRPTMDEVVK 351
RP + EV++
Sbjct: 263 SQRPMLREVLE 273
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 122/296 (41%), Gaps = 55/296 (18%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWL 122
A +F LG+G FG V Y + ++A+K L + L+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQP 175
E++ L HPN+++L GY + L+ E+ P G++ L + A+YI
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L A L+Y HS +VI+RD K N+LL K++DFG + P+
Sbjct: 122 L------------ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 167
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 168 R----TTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEAN--------- 214
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ + Y + R F D EG L + L L + P RP + EV++
Sbjct: 215 TYQETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPXLREVLE 261
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 108/234 (46%), Gaps = 20/234 (8%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+G+G G V Y TG +A++++N + + EI + + +PN
Sbjct: 29 IGQGASGTV---------YTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
+V + L D +V E++ GSL + + T Q + V + L +L
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALEFL 133
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
HS++ VI+R+ K+ NILL ++ + KL+DFG T QS ST V GT + APE +
Sbjct: 134 HSNQ--VIHRNIKSDNILLGMDGSVKLTDFGFCAQ-ITPEQSKRSTMV-GTPYWMAPEVV 189
Query: 256 ATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEW-AKPYLQSKRRI 308
K D++S G++ +EM+ G P R LI P LQ+ ++
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 243
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 134/292 (45%), Gaps = 46/292 (15%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ R + LG+G FG V+ G + T +A+K L ++ +L E + +
Sbjct: 9 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPE-AFLQEAQVM 57
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
+L H LV+L + ++ +V E+M KGSL + L Y++ L + M A
Sbjct: 58 KKLRHEKLVQLYA-VVSEEPIXIVTEYMSKGSLLDFLKGETGKYLR-LPQLVDM--AAQI 113
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY- 247
A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+ + + R +
Sbjct: 114 ASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEXTARQGAKFP 168
Query: 248 -GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKR 306
+ APE G T KSDV+SFG++L E+ + RV PY
Sbjct: 169 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN 211
Query: 307 RIFQVMDARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALE 354
R +V+D ++E Y + + L +C EP+ RPT + + LE
Sbjct: 212 R--EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 260
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 135/292 (46%), Gaps = 46/292 (15%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ R + LG+G FG V+ G + GT V A+K L ++ +L E + +
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTWN---------GTTRV-AIKTLKPGTMSPE-AFLQEAQVM 233
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
+L H LV+L + ++ +V E+M KGSL + L Y++ L + M +
Sbjct: 234 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLR-LPQLVDMAAQI-- 289
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY- 247
A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+ + + R +
Sbjct: 290 ASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFP 344
Query: 248 -GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKR 306
+ APE G T KSDV+SFG++L E+ + RV PY
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN 387
Query: 307 RIFQVMDARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALE 354
R +V+D ++E Y + + L +C EP+ RPT + + LE
Sbjct: 388 R--EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 107/234 (45%), Gaps = 20/234 (8%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+G+G G V Y TG +A++++N + + EI + + +PN
Sbjct: 28 IGQGASGTV---------YTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
+V + L D +V E++ GSL + + T Q + V + L +L
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALEFL 132
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
HS++ VI+RD K+ NILL ++ + KL+DFG T QS S V GT + APE +
Sbjct: 133 HSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQ-ITPEQSKRSXMV-GTPYWMAPEVV 188
Query: 256 ATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEW-AKPYLQSKRRI 308
K D++S G++ +EM+ G P R LI P LQ+ ++
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 242
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 27/221 (12%)
Query: 76 LGEGGFGCVFKGW---IDEHTYAPARPGTGMVIAVKRL----NQESLQGHLEWLTEIKHL 128
LGEG FG V ID+ +P + +AVK L +E L + + +K +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMI 97
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---TGASYI--------QPLS 177
G+ H N++ L+G C +D ++ E+ KG+L +L G Y + ++
Sbjct: 98 GK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 178 WTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQS 237
+ + A+G+ YL S K I+RD N+L+ N K++DFGLA+D
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKC--IHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 238 HVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+T + APE + T +SDV+SFGV++ E+ +
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 134/292 (45%), Gaps = 46/292 (15%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ R + LG+G FG V+ G + T +A+K L ++ +L E + +
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPE-AFLQEAQVM 233
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
+L H LV+L + ++ +V E+M KGSL + L Y++ L + M +
Sbjct: 234 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLR-LPQLVDMAAQI-- 289
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY- 247
A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+ + + R +
Sbjct: 290 ASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFP 344
Query: 248 -GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKR 306
+ APE G T KSDV+SFG++L E+ + RV PY
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN 387
Query: 307 RIFQVMDARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALE 354
R +V+D ++E Y + + L +C EP+ RPT + + LE
Sbjct: 388 R--EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 122/296 (41%), Gaps = 55/296 (18%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWL 122
A +F LG+G FG V Y + ++A+K L + L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQP 175
E++ L HPN+++L GY + L+ E+ P G++ L + A+YI
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L A L+Y HS +VI+RD K N+LL K++DFG + P+
Sbjct: 117 L------------ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 163 R----TELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------- 209
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ + Y + R F D EG L + L L + P RP + EV++
Sbjct: 210 TYQETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPMLREVLE 256
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 131/287 (45%), Gaps = 32/287 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G + A +AVK +N+ SL+ +E+L E +
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETR----VAVKTVNESASLRERIEFLNEASVMKGFTCH 81
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRTGASY---IQPLSWTIRMKVALGAA 189
++V+L+G + L+V E M G L+++L R A P + +++A A
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
G+AYL++ K ++R+ N ++ ++ K+ DFG+ +D + + +
Sbjct: 142 DGMAYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPY--LQSKRR 307
APE + G T SD++SFGVVL E+ S L E +PY L +++
Sbjct: 200 MAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAE--QPYQGLSNEQV 242
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE 354
+ VMD Q T ++ + C P RPT E+V L+
Sbjct: 243 LKFVMDGGYLDQPDNCPERVTDLMRM-CWQFNPNMRPTFLEIVNLLK 288
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 123/296 (41%), Gaps = 55/296 (18%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWL 122
A +F LG+G FG V Y + ++A+K L + L+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 57
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQP 175
E++ L HPN+++L GY + L+ E+ P G++ L + A+YI
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L A L+Y HS + VI+RD K N+LL K++DFG + P+
Sbjct: 118 L------------ANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR 163
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
++ +S GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 164 RTTLS----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------- 210
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ + Y + R F D EG L + L L + P RP + EV++
Sbjct: 211 TYQETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPMLREVLE 257
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 107/234 (45%), Gaps = 20/234 (8%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+G+G G V Y TG +A++++N + + EI + + +PN
Sbjct: 29 IGQGASGTV---------YTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
+V + L D +V E++ GSL + + T Q + V + L +L
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALEFL 133
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
HS++ VI+RD K+ NILL ++ + KL+DFG T QS S V GT + APE +
Sbjct: 134 HSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQ-ITPEQSKRSXMV-GTPYWMAPEVV 189
Query: 256 ATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEW-AKPYLQSKRRI 308
K D++S G++ +EM+ G P R LI P LQ+ ++
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 243
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 131/287 (45%), Gaps = 32/287 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G + A +AVK +N+ SL+ +E+L E +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETR----VAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRTGASY---IQPLSWTIRMKVALGAA 189
++V+L+G + L+V E M G L+++L R A P + +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
G+AYL++ K ++R+ N ++ ++ K+ DFG+ +D + + +
Sbjct: 141 DGMAYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPY--LQSKRR 307
APE + G T SD++SFGVVL E+ S L E +PY L +++
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAE--QPYQGLSNEQV 241
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE 354
+ VMD Q T ++ + C P RPT E+V L+
Sbjct: 242 LKFVMDGGYLDQPDNCPERVTDLMRM-CWQFNPNMRPTFLEIVNLLK 287
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 23/219 (10%)
Query: 76 LGEGGFGCVFKGW---IDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
LGEG FG V ID+ +P + +AVK L ++ + L + ++E++ + +
Sbjct: 89 LGEGCFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 143
Query: 132 -YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---TGASYI--------QPLSWT 179
H N++ L+G C +D ++ E+ KG+L +L G Y + +++
Sbjct: 144 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 203
Query: 180 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 239
+ A+G+ YL S K I+RD N+L+ N K++DFGLA+D
Sbjct: 204 DLVSCTYQLARGMEYLASQKC--IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 261
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+T + APE + T +SDV+SFGV++ E+ +
Sbjct: 262 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 36/216 (16%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLN-----QESLQGHLEWLTEIKHLG 129
+G G FG V+KG W + +AVK LN + LQ + E+ L
Sbjct: 16 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQA---FKNEVGVLR 59
Query: 130 QLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKVALG 187
+ H N++ +GY + +V ++ SL +HL T I+ + +A
Sbjct: 60 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQ 112
Query: 188 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 247
A+G+ YLH+ +I+RD K++NI L + K+ DFGLA + S SH ++ G+
Sbjct: 113 TAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI 170
Query: 248 GYAAPEYMAT---GHLTAKSDVYSFGVVLLEMLSGR 280
+ APE + + +SDVY+FG+VL E+++G+
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 51
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKS 107
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 108 YLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
T Y APE + + + D++S G + EM++ R
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 110/235 (46%), Gaps = 22/235 (9%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+G+G G V Y TG +A++++N + + EI + + +PN
Sbjct: 28 IGQGASGTV---------YTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
+V + L D +V E++ GSL + + T Q + V + L +L
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALEFL 132
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGL-AKDGPTGSQSHVSTRVMGTYGYAAPEY 254
HS++ VI+RD K+ NILL ++ + KL+DFG A+ P S+ + ++GT + APE
Sbjct: 133 HSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSEMVGTPYWMAPEV 187
Query: 255 MATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEW-AKPYLQSKRRI 308
+ K D++S G++ +EM+ G P R LI P LQ+ ++
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 242
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 51
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKS 107
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 108 YLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
T Y APE + + + D++S G + EM++ R
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL---QGHLEWLTE 124
++ R LG+G FG V +G D AP+ G + +AVK L + L + +++ E
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLSQPEAMDDFIRE 71
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR-TGASYIQPLSWTIRMK 183
+ + L H NL++L G L ++ V E P GSL + L + G + LS +
Sbjct: 72 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS-----R 125
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
A+ A+G+ YL S + I+RD N+LL K+ DFGL + P V
Sbjct: 126 YAVQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEH 183
Query: 244 MGT-YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ + APE + T + SD + FGV L EM +
Sbjct: 184 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL---QGHLEWLTE 124
++ R LG+G FG V +G D AP+ G + +AVK L + L + +++ E
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR-TGASYIQPLSWTIRMK 183
+ + L H NL++L G L ++ V E P GSL + L + G + LS +
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS-----R 115
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
A+ A+G+ YL S + I+RD N+LL K+ DFGL + P V
Sbjct: 116 YAVQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEH 173
Query: 244 MGT-YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ + APE + T + SD + FGV L EM +
Sbjct: 174 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 23/219 (10%)
Query: 76 LGEGGFGCVFKGW---IDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
LGEG FG V ID+ +P + +AVK L ++ + L + ++E++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 132 -YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---TGASYI--------QPLSWT 179
H N++ L+G C +D ++ E+ KG+L +L G Y + +++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 180 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 239
+ A+G+ YL S K I+RD N+L+ N K++DFGLA+D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC--IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKN 215
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+T + APE + T +SDV+SFGV++ E+ +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 127/304 (41%), Gaps = 41/304 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES-LQGHLEWLTEIKHLGQL-YH 133
LG G FG V ++ Y + M +AVK L + L ++E+K L L H
Sbjct: 47 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 102
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRM----------- 182
N+V L+G C L++ E+ G L N L R S+I + M
Sbjct: 103 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 162
Query: 183 --KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ AKG+A+L S I+RD NILL K+ DFGLA+D S V
Sbjct: 163 LLSFSYQVAKGMAFLASKNC--IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 241 TRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRP--SREHNLIEWA 298
+ APE + T +SDV+S+G+ L E+ S P S+ + +I+
Sbjct: 221 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 280
Query: 299 KPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE-QIQ 357
L + ++ D +KT C +P RPT ++V+ +E QI
Sbjct: 281 FRMLSPEHAPAEMYD-----------IMKT------CWDADPLKRPTFKQIVQLIEKQIS 323
Query: 358 DTND 361
++ +
Sbjct: 324 ESTN 327
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 122/296 (41%), Gaps = 55/296 (18%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWL 122
A +F LG+G FG V Y + ++A+K L + L+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQP 175
E++ L HPN+++L GY + L+ E+ P G++ L + A+YI
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L A L+Y HS +VI+RD K N+LL K++DFG + P+
Sbjct: 120 L------------ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 165
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 166 R----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------- 212
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ + Y + R F D EG L + L L + P RP + EV++
Sbjct: 213 TYQETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPMLREVLE 259
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 51
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKS 107
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 108 YLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
T Y APE + + + D++S G + EM++ R
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFM---DASALTGIPLPLIKS 110
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 111 YLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
T Y APE + + + D++S G + EM++ R
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 122/296 (41%), Gaps = 55/296 (18%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWL 122
A +F LG+G FG V Y + ++A+K L + L+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQP 175
E++ L HPN+++L GY + L+ E+ P G++ L + A+YI
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L A L+Y HS +VI+RD K N+LL K++DFG + P+
Sbjct: 122 L------------ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 167
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 168 R----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------- 214
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ + Y + R F D EG L + L L + P RP + EV++
Sbjct: 215 TYQETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPMLREVLE 261
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 53
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKS 109
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 110 YLFQLLQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
T Y APE + + + D++S G + EM++ R
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+K RL+ E+ + EI
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 54
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLF 110
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
+GL++ HS + V++RD K N+L++ KL+DFGLA+ G T + T
Sbjct: 111 QLLQGLSFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVT 166
Query: 247 YGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
Y APE + + + D++S G + EM++ R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKS 110
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 111 YLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
T Y APE + + + D++S G + EM++ R
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 53
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKS 109
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 110 YLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
T Y APE + + + D++S G + EM++ R
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 17/216 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL-YH 133
LGEG FG V + +P +AVK L ++ + L + ++E++ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL-----------FRTGASYIQPLSWTIRM 182
N++ L+G C +D ++ E+ KG+L +L F + + LS +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
A A+G+ YL S K I+RD N+L+ + K++DFGLA+D +T
Sbjct: 154 SCAYQVARGMEYLASKKC--IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTN 211
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 52
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKS 108
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 109 YLFQLLQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
T Y APE + + + D++S G + EM++ R
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 126/257 (49%), Gaps = 38/257 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL--EWLTEIKHLGQLYH 133
+GEG +G V+K A+ G ++A+KR+ ++ + + EI L +L+H
Sbjct: 29 VGEGTYGVVYK----------AKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
PN+V LI + LV+EFM K + + +Q I + L +G+A
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEKDL--KKVLDENKTGLQDSQIKIYLYQLL---RGVA 133
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 253
+ H + ++++RD K N+L++ + KL+DFGLA+ +S+ T + T Y AP+
Sbjct: 134 HCH--QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPD 189
Query: 254 -YMATGHLTAKSDVYSFGVVLLEMLSGRR----VIDKNRPSREHNLI------EWAKPYL 302
M + + D++S G + EM++G+ V D ++ + +++ EW P +
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREW--PQV 247
Query: 303 QS----KRRIFQVMDAR 315
Q K+R FQV + +
Sbjct: 248 QELPLWKQRTFQVFEKK 264
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 52
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKS 108
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 109 YLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
T Y APE + + + D++S G + EM++ R
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 122/296 (41%), Gaps = 55/296 (18%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWL 122
A +F LG+G FG V Y + ++A+K L + L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQP 175
E++ L HPN+++L GY + L+ E+ P G++ L + A+YI
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L A L+Y HS +VI+RD K N+LL K++DFG + P+
Sbjct: 117 L------------ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 163 R----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------- 209
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ + Y + R F D EG L + L L + P RP + EV++
Sbjct: 210 TYQETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPMLREVLE 256
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 23/219 (10%)
Query: 76 LGEGGFGCVFKGW---IDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
LGEG FG V ID+ +P + +AVK L ++ + L + ++E++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 132 -YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---TGASYI--------QPLSWT 179
H N++ L+G C +D ++ E+ KG+L +L G Y + +++
Sbjct: 98 GKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 180 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 239
+ A+G+ YL S K I+RD N+L+ N K++DFGLA+D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC--IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+T + APE + T +SDV+SFGV++ E+ +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 122/296 (41%), Gaps = 55/296 (18%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWL 122
A +F LG+G FG V Y + ++A+K L + L+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQP 175
E++ L HPN+++L GY + L+ E+ P G++ L + A+YI
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L A L+Y HS +VI+RD K N+LL K++DFG + P+
Sbjct: 122 L------------ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 167
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 168 R----TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------- 214
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ + Y + R F D EG L + L L + P RP + EV++
Sbjct: 215 TYQETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPMLREVLE 261
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 53
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKS 109
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 110 YLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
T Y APE + + + D++S G + EM++ R
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 126/257 (49%), Gaps = 38/257 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE--WLTEIKHLGQLYH 133
+GEG +G V+K A+ G ++A+KR+ ++ + + EI L +L+H
Sbjct: 29 VGEGTYGVVYK----------AKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
PN+V LI + LV+EFM K + + +Q I + L +G+A
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEKDL--KKVLDENKTGLQDSQIKIYLYQLL---RGVA 133
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 253
+ H + ++++RD K N+L++ + KL+DFGLA+ +S+ T + T Y AP+
Sbjct: 134 HCH--QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPD 189
Query: 254 -YMATGHLTAKSDVYSFGVVLLEMLSGRR----VIDKNRPSREHNLI------EWAKPYL 302
M + + D++S G + EM++G+ V D ++ + +++ EW P +
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREW--PQV 247
Query: 303 QS----KRRIFQVMDAR 315
Q K+R FQV + +
Sbjct: 248 QELPLWKQRTFQVFEKK 264
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 51
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKS 107
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 108 YLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
T Y APE + + + D++S G + EM++ R
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 128/319 (40%), Gaps = 55/319 (17%)
Query: 43 PRTEGEILLGSNIKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTG 102
P E L S K+ + A +F LG+G FG V Y +
Sbjct: 9 PENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNV---------YLAREKQSK 59
Query: 103 MVIAVKRLNQESLQG---HLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKG 159
++A+K L + L+ + E++ L HPN+++L GY + L+ E+ P G
Sbjct: 60 FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 119
Query: 160 SLENHLFRTG-------ASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNI 212
++ L + A+YI L A L+Y HS +VI+RD K N+
Sbjct: 120 TVYRELQKLSKFDEQRTATYITEL------------ANALSYCHS--KRVIHRDIKPENL 165
Query: 213 LLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVV 272
LL K++DFG + P+ + + GT Y PE + K D++S GV+
Sbjct: 166 LLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVL 221
Query: 273 LLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLA 332
E L G+ + N + + Y + R F D EG L + L
Sbjct: 222 CYEFLVGKPPFEAN---------TYQETYKRISRVEFTFPDFVTEGARDLISRL------ 266
Query: 333 IKCLSNEPKFRPTMDEVVK 351
L + P RP + EV++
Sbjct: 267 ---LKHNPSQRPMLREVLE 282
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 122/296 (41%), Gaps = 55/296 (18%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWL 122
A +F LG+G FG V Y + ++A+K L + L+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 57
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQP 175
E++ L HPN+++L GY + L+ E+ P G++ L + A+YI
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L A L+Y HS +VI+RD K N+LL K++DFG + P+
Sbjct: 118 L------------ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 164 R----TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------- 210
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ + Y + R F D EG L + L L + P RP + EV++
Sbjct: 211 TYQETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPMLREVLE 257
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 127/304 (41%), Gaps = 41/304 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES-LQGHLEWLTEIKHLGQL-YH 133
LG G FG V ++ Y + M +AVK L + L ++E+K L L H
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRM----------- 182
N+V L+G C L++ E+ G L N L R S+I + M
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 183 --KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ AKG+A+L S I+RD NILL K+ DFGLA+D S V
Sbjct: 170 LLSFSYQVAKGMAFLASKNC--IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 241 TRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRP--SREHNLIEWA 298
+ APE + T +SDV+S+G+ L E+ S P S+ + +I+
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 287
Query: 299 KPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE-QIQ 357
L + ++ D +KT C +P RPT ++V+ +E QI
Sbjct: 288 FRMLSPEHAPAEMYD-----------IMKT------CWDADPLKRPTFKQIVQLIEKQIS 330
Query: 358 DTND 361
++ +
Sbjct: 331 ESTN 334
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 55
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKS 111
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 112 YLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 169
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
T Y APE + + + D++S G + EM++ R
Sbjct: 170 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 20/215 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+K RL+ E+ + EI
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 53
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLF 109
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V T
Sbjct: 110 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 165
Query: 247 YGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
Y APE + + + D++S G + EM++ R
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 127/304 (41%), Gaps = 41/304 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES-LQGHLEWLTEIKHLGQL-YH 133
LG G FG V ++ Y + M +AVK L + L ++E+K L L H
Sbjct: 49 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 104
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRM----------- 182
N+V L+G C L++ E+ G L N L R S+I + M
Sbjct: 105 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 164
Query: 183 --KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ AKG+A+L S I+RD NILL K+ DFGLA+D S V
Sbjct: 165 LLSFSYQVAKGMAFLASKNC--IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 241 TRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRP--SREHNLIEWA 298
+ APE + T +SDV+S+G+ L E+ S P S+ + +I+
Sbjct: 223 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 282
Query: 299 KPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE-QIQ 357
L + ++ D +KT C +P RPT ++V+ +E QI
Sbjct: 283 FRMLSPEHAPAEMYD-----------IMKT------CWDADPLKRPTFKQIVQLIEKQIS 325
Query: 358 DTND 361
++ +
Sbjct: 326 ESTN 329
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 20/215 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+K RL+ E+ + EI
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 53
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLF 109
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V T
Sbjct: 110 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 165
Query: 247 YGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
Y APE + + + D++S G + EM++ R
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKS 110
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 111 YLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
T Y APE + + + D++S G + EM++ R
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 23/219 (10%)
Query: 76 LGEGGFGCVFKGW---IDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
LGEG FG V ID+ +P + +AVK L ++ + L + ++E++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 132 -YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---TGASYI--------QPLSWT 179
H N++ L+G C +D ++ E+ KG+L +L G Y + +++
Sbjct: 98 GKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 180 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 239
+ A+G+ YL S K I+RD N+L+ N K++DFGLA+D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC--IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+T + APE + T +SDV+SFGV++ E+ +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 139/308 (45%), Gaps = 46/308 (14%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ R + LG+G FG V+ G + T +A+K L ++ +L E + +
Sbjct: 12 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPE-AFLQEAQVM 60
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
+L H LV+L + ++ +V E+M KGSL + L Y++ L + M A
Sbjct: 61 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLR-LPQLVDM--AAQI 116
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY- 247
A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+ + + R +
Sbjct: 117 ASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFP 171
Query: 248 -GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKR 306
+ APE G T KSDV+SFG++L E+ + RV PY
Sbjct: 172 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN 214
Query: 307 RIFQVMDARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALEQIQDTNDA 362
R +V+D ++E Y + + L +C EP+ RPT + + LE + +
Sbjct: 215 R--EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 271
Query: 363 GVSRDESL 370
E+L
Sbjct: 272 QYQPGENL 279
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 122/296 (41%), Gaps = 55/296 (18%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWL 122
A +F LG+G FG V Y + ++A+K L + L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQP 175
E++ L HPN+++L GY + L+ E+ P G++ L + A+YI
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L A L+Y HS +VI+RD K N+LL K++DFG + P+
Sbjct: 117 L------------ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 163 R----TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------- 209
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ + Y + R F D EG L + L L + P RP + EV++
Sbjct: 210 TYQETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPMLREVLE 256
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 122/296 (41%), Gaps = 55/296 (18%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWL 122
A +F LG+G FG V Y + ++A+K L + L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQP 175
E++ L HPN+++L GY + L+ E+ P G++ L + A+YI
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L A L+Y HS +VI+RD K N+LL K++DFG + P+
Sbjct: 117 L------------ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 163 R----TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------- 209
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ + Y + R F D EG L + L L + P RP + EV++
Sbjct: 210 TYQETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPMLREVLE 256
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 134/292 (45%), Gaps = 46/292 (15%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ R + LG+G FG V+ G + T +A+K L ++ +L E + +
Sbjct: 16 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPE-AFLQEAQVM 64
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
+L H LV+L + ++ +V E+M KGSL + L Y++ L + M +
Sbjct: 65 KKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLR-LPQLVDMSAQI-- 120
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY- 247
A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+ + + R +
Sbjct: 121 ASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFP 175
Query: 248 -GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKR 306
+ APE G T KSDV+SFG++L E+ + RV PY
Sbjct: 176 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN 218
Query: 307 RIFQVMDARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALE 354
R +V+D ++E Y + + L +C EP+ RPT + + LE
Sbjct: 219 R--EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 20/215 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+K RL+ E+ + EI
Sbjct: 5 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 55
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLF 111
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V T
Sbjct: 112 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 167
Query: 247 YGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
Y APE + + + D++S G + EM++ R
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 121/296 (40%), Gaps = 55/296 (18%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWL 122
A +F LG+G FG V Y + ++A+K L + L+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQP 175
E++ L HPN+++L GY + L+ E+ P+G + L + A+YI
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE 121
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L A L+Y HS +VI+RD K N+LL K++DFG + P+
Sbjct: 122 L------------ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 167
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 168 R----XXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------- 214
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ + Y + R F D EG L + L L + P RP + EV++
Sbjct: 215 TYQETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPMLREVLE 261
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 66
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L+ + MP G L H G+ Y+ L+W +++
Sbjct: 67 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 123
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
A+G+ YL + ++++RD N+L+ + K++DFGLAK + + +
Sbjct: 124 ------AEGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 175
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 176 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 134/292 (45%), Gaps = 46/292 (15%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ R + LG+G FG V+ G + T +A+K L ++ +L E + +
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPE-AFLQEAQVM 233
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
+L H LV+L + ++ +V E+M KGSL + L Y++ L + M +
Sbjct: 234 KKLRHEKLVQLYA-VVSEEPIYIVGEYMSKGSLLDFLKGETGKYLR-LPQLVDMAAQI-- 289
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY- 247
A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+ + + R +
Sbjct: 290 ASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFP 344
Query: 248 -GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKR 306
+ APE G T KSDV+SFG++L E+ + RV PY
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN 387
Query: 307 RIFQVMDARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALE 354
R +V+D ++E Y + + L +C EP+ RPT + + LE
Sbjct: 388 R--EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 122/296 (41%), Gaps = 55/296 (18%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWL 122
A +F LG+G FG V Y + ++A+K L + L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQP 175
E++ L HPN+++L GY + L+ E+ P G++ L + A+YI
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L A L+Y HS +VI+RD K N+LL K++DFG + P+
Sbjct: 117 L------------ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 163 R----TXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------- 209
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ + Y + R F D EG L + L L + P RP + EV++
Sbjct: 210 TYQETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPMLREVLE 256
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 23/219 (10%)
Query: 76 LGEGGFGCVFKGW---IDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
LGEG FG V ID+ +P + +AVK L ++ + L + ++E++ + +
Sbjct: 32 LGEGCFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 86
Query: 132 -YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---TGASYI--------QPLSWT 179
H N++ L+G C +D ++ E+ KG+L +L G Y + +++
Sbjct: 87 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 146
Query: 180 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 239
+ A+G+ YL S K I+RD N+L+ N K++DFGLA+D
Sbjct: 147 DLVSCTYQLARGMEYLASQKC--IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 204
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+T + APE + T +SDV+SFGV++ E+ +
Sbjct: 205 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 23/219 (10%)
Query: 76 LGEGGFGCVFKGW---IDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
LGEG FG V ID+ +P + +AVK L ++ + L + ++E++ + +
Sbjct: 35 LGEGCFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 89
Query: 132 -YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---TGASYI--------QPLSWT 179
H N++ L+G C +D ++ E+ KG+L +L G Y + +++
Sbjct: 90 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 149
Query: 180 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 239
+ A+G+ YL S K I+RD N+L+ N K++DFGLA+D
Sbjct: 150 DLVSCTYQLARGMEYLASQKC--IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 207
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+T + APE + T +SDV+SFGV++ E+ +
Sbjct: 208 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 122/296 (41%), Gaps = 55/296 (18%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWL 122
A +F LG+G FG V Y + ++A+K L + L+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQP 175
E++ L HPN+++L GY + L+ E+ P G++ L + A+YI
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L A L+Y HS +VI+RD K N+LL K++DFG + P+
Sbjct: 120 L------------ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 165
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 166 R----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------- 212
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ + Y + R F D EG L + L L + P RP + EV++
Sbjct: 213 TYQETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPMLREVLE 259
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 23/219 (10%)
Query: 76 LGEGGFGCVFKGW---IDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
LGEG FG V ID+ +P + +AVK L ++ + L + ++E++ + +
Sbjct: 30 LGEGCFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 84
Query: 132 -YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---TGASYI--------QPLSWT 179
H N++ L+G C +D ++ E+ KG+L +L G Y + +++
Sbjct: 85 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 144
Query: 180 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 239
+ A+G+ YL S K I+RD N+L+ N K++DFGLA+D
Sbjct: 145 DLVSCTYQLARGMEYLASQKC--IHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKK 202
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+T + APE + T +SDV+SFGV++ E+ +
Sbjct: 203 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VL G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L++ + MP G L H G+ Y+ L+W +++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 133
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFGLAK + + +
Sbjct: 134 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 185
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 22/209 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 17 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPD-AFLAEANLMKQLQHQR 65
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L ++ ++ E+M GSL + F S I+ L+ + +A A+G+A++
Sbjct: 66 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFI 121
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPE 253
++ I+R+ + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 122 --EERNYIHRNLRAANILVSDTLSCKIADFGLAR---LIEDNEYTAREGAKFPIKWTAPE 176
Query: 254 YMATGHLTAKSDVYSFGVVLLEMLSGRRV 282
+ G T KSDV+SFG++L E+++ R+
Sbjct: 177 AINYGTFTIKSDVWSFGILLTEIVTHGRI 205
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 106/219 (48%), Gaps = 23/219 (10%)
Query: 76 LGEGGFGCVFKGW---IDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
LGEG FG V ID+ +P + +AVK L ++ + L + ++E++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 132 -YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---TGASYI--------QPLSWT 179
H N++ L+G C +D ++ E+ KG+L +L G Y + +++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 180 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 239
+ A+G+ YL S K I+RD N+L+ N +++DFGLA+D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC--IHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKK 215
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+T + APE + T +SDV+SFGV++ E+ +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 30/213 (14%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLN--QESLQGHLEWLTEIKHLGQLY 132
+G G FG V+KG W + +AVK LN + Q + E+ L +
Sbjct: 44 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 90
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKVALGAAK 190
H N++ +GY + +V ++ SL +HL T I+ + +A A+
Sbjct: 91 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQ 143
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ YLH+ +I+RD K++NI L + K+ DFGLA S SH ++ G+ +
Sbjct: 144 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 201
Query: 251 APEYMATGH---LTAKSDVYSFGVVLLEMLSGR 280
APE + + +SDVY+FG+VL E+++G+
Sbjct: 202 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 134/292 (45%), Gaps = 46/292 (15%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ R + LG+G FG V+ G + T +A+K L ++ +L E + +
Sbjct: 16 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPE-AFLQEAQVM 64
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
+L H LV+L + ++ +V E+M KGSL + L Y++ L + M +
Sbjct: 65 KKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLR-LPQLVDMSAQI-- 120
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY- 247
A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+ + + R +
Sbjct: 121 ASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEWTARQGAKFP 175
Query: 248 -GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKR 306
+ APE G T KSDV+SFG++L E+ + RV PY
Sbjct: 176 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN 218
Query: 307 RIFQVMDARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALE 354
R +V+D ++E Y + + L +C EP+ RPT + + LE
Sbjct: 219 R--EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLN-----QESLQGHLEWLTEIKHLG 129
+G G FG V+KG W + +AVK LN + LQ + E+ L
Sbjct: 43 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQA---FKNEVGVLR 86
Query: 130 QLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKVALG 187
+ H N++ +GY + +V ++ SL +HL T I+ + +A
Sbjct: 87 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQ 139
Query: 188 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 247
A+G+ YLH+ +I+RD K++NI L + K+ DFGLA S SH ++ G+
Sbjct: 140 TAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 197
Query: 248 GYAAPEYMAT---GHLTAKSDVYSFGVVLLEMLSGR 280
+ APE + + +SDVY+FG+VL E+++G+
Sbjct: 198 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L++ + MP G L H G+ Y+ L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 128
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFG AK + + +
Sbjct: 129 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 180
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 122/296 (41%), Gaps = 55/296 (18%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWL 122
A +F LG+G FG V Y + ++A+K L + L+ +
Sbjct: 10 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 60
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQP 175
E++ L HPN+++L GY + L+ E+ P G++ L + A+YI
Sbjct: 61 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 120
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L A L+Y HS +VI+RD K N+LL K++DFG + P+
Sbjct: 121 L------------ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 166
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 167 R----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------- 213
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ + Y + R F D EG L + L L + P RP + EV++
Sbjct: 214 TYQETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPMLREVLE 260
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 122/296 (41%), Gaps = 55/296 (18%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWL 122
A +F LG+G FG V Y + ++A+K L + L+ +
Sbjct: 5 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 55
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQP 175
E++ L HPN+++L GY + L+ E+ P G++ L + A+YI
Sbjct: 56 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 115
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L A L+Y HS +VI+RD K N+LL K++DFG + P+
Sbjct: 116 L------------ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 161
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 162 R----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------- 208
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ + Y + R F D EG L + L L + P RP + EV++
Sbjct: 209 TYQETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPMLREVLE 255
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 20/215 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+ RL+ E+ + EI
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALXKIRLDTETEGVPSTAIREIS 54
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLF 110
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ G T + T
Sbjct: 111 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVT 166
Query: 247 YGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
Y APE + + + D++S G + EM++ R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 20/215 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+ RL+ E+ + EI
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALXKIRLDTETEGVPSTAIREIS 53
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
L +L HPN+VKL+ ++ LV+EF+ + L+ + AS + + +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLF 109
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ G T + T
Sbjct: 110 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVT 165
Query: 247 YGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
Y APE + + + D++S G + EM++ R
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 121/296 (40%), Gaps = 55/296 (18%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWL 122
A +F LG+G FG V Y + ++A+K L + L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNV---------YLAREKNSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQP 175
E++ L HPN+++L GY + L+ E+ P G++ L + A+YI
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L A L+Y HS KVI+RD K N+LL K++DFG + P+
Sbjct: 117 L------------ANALSYCHSK--KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
++ + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 163 RAALC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------- 209
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ Y + R F D EG L + L L + P RP + EV++
Sbjct: 210 TYQDTYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPMLREVLE 256
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VL G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L+ + MP G L H G+ Y+ L+W +++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 133
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFGLAK + + +
Sbjct: 134 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 185
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L++ + MP G L H G+ Y+ L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 128
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFG AK + + +
Sbjct: 129 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 180
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L+ + MP G L H G+ Y+ L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 128
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFG AK + + +
Sbjct: 129 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 180
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VL G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L+ + MP G L H G+ Y+ L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 126
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFGLAK + + +
Sbjct: 127 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L++ + MP G L H G+ Y+ L+W +++
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 130
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFG AK + + +
Sbjct: 131 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 182
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 183 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 134/288 (46%), Gaps = 41/288 (14%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTE-IKH 127
R VLG G FG V KG + P + + +K + +S + + +T+ +
Sbjct: 32 ELRKLKVLGSGVFGTVHKG-----VWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLA 86
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQP---LSWTIRMKV 184
+G L H ++V+L+G C +L V +++P GSL +H+ R + P L+W +++
Sbjct: 87 IGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQI-- 142
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 244
AKG+ YL ++ +++R+ N+LL +++DFG+A P + + +
Sbjct: 143 ----AKGMYYL--EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAK 196
Query: 245 GTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQS 304
+ A E + G T +SDV+S+GV + E+++ A+PY +
Sbjct: 197 TPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFG-----------------AEPY--A 237
Query: 305 KRRIFQVMDARIEGQYSLGAALKTA---VLAIKCLSNEPKFRPTMDEV 349
R+ +V D +G+ + T ++ +KC + RPT E+
Sbjct: 238 GLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKEL 285
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+ L + S + + E L E
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIMELREATSPKANKEILDEAY 103
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L+ + MP G L H G+ Y+ L+W +++
Sbjct: 104 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 160
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFGLAK + + +
Sbjct: 161 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 212
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 213 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 122/293 (41%), Gaps = 49/293 (16%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEI 125
A +F LG+G FG V+ + + A V+ +L + ++ L EI
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALK----VLFKAQLEKAGVEHQLRREVEI 58
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQPLSW 178
+ L HPN+++L GY + L+ E+ P G++ L + A+YI L
Sbjct: 59 Q--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-- 114
Query: 179 TIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH 238
A L+Y HS +VI+RD K N+LL K++DFG + P+ +
Sbjct: 115 ----------ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-- 160
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWA 298
T + GT Y PE + K D++S GV+ E L G+ + N +
Sbjct: 161 --TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQ 209
Query: 299 KPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ Y + R F D EG L + L L + P RP + EV++
Sbjct: 210 ETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPMLREVLE 253
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 101/210 (48%), Gaps = 25/210 (11%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYH 133
+LGEG FG V++G H G + +AVK ++ +L ++++E + L H
Sbjct: 31 ILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 84
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
P++VKLIG +E++ ++ E P G L ++L R S L + +L K +A
Sbjct: 85 PHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNS----LKVLTLVLYSLQICKAMA 139
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-----DGPTGSQSHVSTRVMGTYG 248
YL S ++RD NIL+ KL DFGL++ D S + + + M
Sbjct: 140 YLES--INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWM---- 193
Query: 249 YAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+PE + T SDV+ F V + E+LS
Sbjct: 194 --SPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 134/288 (46%), Gaps = 41/288 (14%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTE-IKH 127
R VLG G FG V KG + P + + +K + +S + + +T+ +
Sbjct: 14 ELRKLKVLGSGVFGTVHKG-----VWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLA 68
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQP---LSWTIRMKV 184
+G L H ++V+L+G C +L V +++P GSL +H+ R + P L+W +++
Sbjct: 69 IGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQI-- 124
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 244
AKG+ YL ++ +++R+ N+LL +++DFG+A P + + +
Sbjct: 125 ----AKGMYYL--EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAK 178
Query: 245 GTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQS 304
+ A E + G T +SDV+S+GV + E+++ A+PY +
Sbjct: 179 TPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFG-----------------AEPY--A 219
Query: 305 KRRIFQVMDARIEGQYSLGAALKTA---VLAIKCLSNEPKFRPTMDEV 349
R+ +V D +G+ + T ++ +KC + RPT E+
Sbjct: 220 GLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKEL 267
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 98/218 (44%), Gaps = 30/218 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG GGFG V + WI + TG +A+K+ QE S + W EI+ + +L HP
Sbjct: 22 LGTGGFGYVLR-WIHQ--------DTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 72
Query: 135 NLVKL------IGYCLEDDHRLLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKVAL 186
N+V + +D LL E+ G L +L F + IR ++
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG---PIRTLLS- 128
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA---KLSDFGLAKDGPTGSQSHVSTRV 243
+ L YLH ++ +I+RD K NI+L K+ D G AK+ Q + T
Sbjct: 129 DISSALRYLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEF 183
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRR 281
+GT Y APE + T D +SFG + E ++G R
Sbjct: 184 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L+ + MP G L H G+ Y+ L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 126
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFG AK + + +
Sbjct: 127 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 178
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 98/218 (44%), Gaps = 30/218 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG GGFG V + WI + TG +A+K+ QE S + W EI+ + +L HP
Sbjct: 23 LGTGGFGYVLR-WIHQ--------DTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 73
Query: 135 NLVKL------IGYCLEDDHRLLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKVAL 186
N+V + +D LL E+ G L +L F + IR ++
Sbjct: 74 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG---PIRTLLS- 129
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA---KLSDFGLAKDGPTGSQSHVSTRV 243
+ L YLH ++ +I+RD K NI+L K+ D G AK+ Q + T
Sbjct: 130 DISSALRYLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEF 184
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRR 281
+GT Y APE + T D +SFG + E ++G R
Sbjct: 185 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL----ENHLFRTGASYIQPLSWTIRM 182
+ + +P++ +L+G CL +L+ + MP G L H G+ Y+ L+W +++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 133
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
AKG+ YL + ++++RD N+L+ + K++DFG AK + + +
Sbjct: 134 ------AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 185
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ A E + T +SDV+S+GV + E+++
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYH 133
+LGEG FG V++G H G + +AVK ++ +L ++++E + L H
Sbjct: 15 ILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 68
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
P++VKLIG +E++ ++ E P G L ++L R S ++ L+ + +L K +A
Sbjct: 69 PHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNS-LKVLTLVLY---SLQICKAMA 123
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-----DGPTGSQSHVSTRVMGTYG 248
YL S ++RD NIL+ KL DFGL++ D S + + + M
Sbjct: 124 YLES--INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWM---- 177
Query: 249 YAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+PE + T SDV+ F V + E+LS
Sbjct: 178 --SPESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 125/275 (45%), Gaps = 34/275 (12%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+GEG G V ++HT G +AVK+++ Q E+ + +H N
Sbjct: 53 IGEGSTGIVCIA-TEKHT--------GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDN 103
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
+V + L D +V EF+ G+L + + T + Q + V L + L+YL
Sbjct: 104 VVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAT------VCLSVLRALSYL 157
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
H+ VI+RD K+ +ILL + KLSDFG + ++GT + APE +
Sbjct: 158 HNQ--GVIHRDIKSDSILLTSDGRIKLSDFGFCAQ--VSKEVPKRKXLVGTPYWMAPEVI 213
Query: 256 ATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDAR 315
+ + D++S G++++EM ID P + +P LQ+ RRI + R
Sbjct: 214 SRLPYGTEVDIWSLGIMVIEM------IDGEPPY-------FNEPPLQAMRRIRDSLPPR 260
Query: 316 IEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVV 350
++ + + + L+ + + L EP R T E++
Sbjct: 261 VKDLHKVSSVLRGFLDLM--LVREPSQRATAQELL 293
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLN-----QESLQGHLEWLTEIKHLG 129
+G G FG V+KG W + +AVK LN + LQ + E+ L
Sbjct: 18 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQA---FKNEVGVLR 61
Query: 130 QLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKVALG 187
+ H N++ +GY + +V ++ SL +HL T I+ + +A
Sbjct: 62 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQ 114
Query: 188 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 247
A+G+ YLH+ +I+RD K++NI L + K+ DFGLA S SH ++ G+
Sbjct: 115 TAQGMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 172
Query: 248 GYAAPEYMAT---GHLTAKSDVYSFGVVLLEMLSGR 280
+ APE + + +SDVY+FG+VL E+++G+
Sbjct: 173 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLN-----QESLQGHLEWLTEIKHLG 129
+G G FG V+KG W + +AVK LN + LQ + E+ L
Sbjct: 21 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQA---FKNEVGVLR 64
Query: 130 QLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKVALG 187
+ H N++ +GY + +V ++ SL +HL T I+ + +A
Sbjct: 65 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQ 117
Query: 188 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 247
A+G+ YLH+ +I+RD K++NI L + K+ DFGLA S SH ++ G+
Sbjct: 118 TAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 175
Query: 248 GYAAPEYMAT---GHLTAKSDVYSFGVVLLEMLSGR 280
+ APE + + +SDVY+FG+VL E+++G+
Sbjct: 176 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 122/296 (41%), Gaps = 55/296 (18%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWL 122
A +F LG+G FG V Y + ++A+K L + L+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQP 175
E++ L HPN+++L GY + L+ E+ P G++ L + A+YI
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L A L+Y HS +VI+RD K N+LL K++DFG + P+
Sbjct: 120 L------------ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 165
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
++ + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 166 RAALC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------- 212
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ + Y + R F D EG L + L L + P RP + EV++
Sbjct: 213 TYQETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPMLREVLE 259
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 134/292 (45%), Gaps = 46/292 (15%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ R + LG+G FG V+ G + T +A+K L ++ +L E + +
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPE-AFLQEAQVM 67
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
+L H LV+L + ++ +V E+M KGSL + L Y++ L + M +
Sbjct: 68 KKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLR-LPQLVDMAAQI-- 123
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY- 247
A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+ + + R +
Sbjct: 124 ASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEXTARQGAKFP 178
Query: 248 -GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKR 306
+ APE G T KSDV+SFG++L E+ + RV PY
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN 221
Query: 307 RIFQVMDARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALE 354
R +V+D ++E Y + + L +C +P+ RPT + + LE
Sbjct: 222 R--EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 30/213 (14%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLN--QESLQGHLEWLTEIKHLGQLY 132
+G G FG V+KG W + +AVK LN + Q + E+ L +
Sbjct: 21 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 67
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKVALGAAK 190
H N++ +GY + +V ++ SL +HL T I+ + +A A+
Sbjct: 68 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQ 120
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ YLH+ +I+RD K++NI L + K+ DFGLA S SH ++ G+ +
Sbjct: 121 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
Query: 251 APEYMAT---GHLTAKSDVYSFGVVLLEMLSGR 280
APE + + +SDVY+FG+VL E+++G+
Sbjct: 179 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 101/210 (48%), Gaps = 25/210 (11%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYH 133
+LGEG FG V++G H G + +AVK ++ +L ++++E + L H
Sbjct: 19 ILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 72
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
P++VKLIG +E++ ++ E P G L ++L R S L + +L K +A
Sbjct: 73 PHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNS----LKVLTLVLYSLQICKAMA 127
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-----DGPTGSQSHVSTRVMGTYG 248
YL S ++RD NIL+ KL DFGL++ D S + + + M
Sbjct: 128 YLES--INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWM---- 181
Query: 249 YAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+PE + T SDV+ F V + E+LS
Sbjct: 182 --SPESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 122/296 (41%), Gaps = 55/296 (18%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWL 122
A +F LG+G FG V Y + ++A+K L + L+ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 58
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQP 175
E++ L HPN+++L GY + L+ E+ P G++ L + A+YI
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 118
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L A L+Y HS +VI+RD K N+LL K+++FG + P+
Sbjct: 119 L------------ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR 164
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 165 R----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------- 211
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ + Y + R F D EG L + L L + P RP + EV++
Sbjct: 212 TYQETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPMLREVLE 258
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 125/303 (41%), Gaps = 45/303 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIKHLGQL-YH 133
LG G FG V I+ + + T +AVK L + + H ++E+K L + +H
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 134 PNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHL---------FRTGASYIQPLSWTIRMK 183
N+V L+G C + L+V EF G+L +L ++ Y L+ +
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIX 152
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
+ AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 153 YSFQVAKGMEFLAS--RKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQ 303
+ APE + T +SDV+SFGV+L E+ S A PY
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASPYPG 253
Query: 304 SK------RRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQ 357
K RR+ + R Y+ +T + C EP RPT E+V+ L +
Sbjct: 254 VKIDEEFCRRLKEGTRMRAP-DYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLGNLL 309
Query: 358 DTN 360
N
Sbjct: 310 QAN 312
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 24/210 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G G V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 21 LGAGQAGEVWMGYYNGHTK----------VAVKSLKQGSMSPD-AFLAEANLMKQLQHQR 69
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L ++ ++ E+M GSL + F S I+ L+ + +A A+G+A++
Sbjct: 70 LVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIK-LTINKLLDMAAQIAEGMAFI 125
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRVMGTYGYAAP 252
++ I+RD + +NIL+ + K++DFGLA+ D ++ + T AP
Sbjct: 126 --EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWT----AP 179
Query: 253 EYMATGHLTAKSDVYSFGVVLLEMLSGRRV 282
E + G T KSDV+SFG++L E+++ R+
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRI 209
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 121/296 (40%), Gaps = 55/296 (18%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWL 122
A +F LG+G FG V Y + ++A+K L + L+ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 58
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQP 175
E++ L HPN+++L GY + L+ E+ P G++ L + A+YI
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 118
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L A L+Y HS +VI+RD K N+LL K++DFG + P+
Sbjct: 119 L------------ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 164
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 165 RXXLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------- 211
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ + Y + R F D EG L + L L + P RP + EV++
Sbjct: 212 TYQETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPMLREVLE 258
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 30/213 (14%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLN--QESLQGHLEWLTEIKHLGQLY 132
+G G FG V+KG W + +AVK LN + Q + E+ L +
Sbjct: 16 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKVALGAAK 190
H N++ +GY + +V ++ SL +HL T I+ + +A A+
Sbjct: 63 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQ 115
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ YLH+ +I+RD K++NI L + K+ DFGLA S SH ++ G+ +
Sbjct: 116 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 251 APEYMAT---GHLTAKSDVYSFGVVLLEMLSGR 280
APE + + +SDVY+FG+VL E+++G+
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 17/216 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL-YH 133
LGEG FG V + +P +AVK L ++ + L + ++E++ + + H
Sbjct: 21 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---TGASYI--------QPLSWTIRM 182
N++ L+G C +D ++ E+ KG+L +L G Y + LS +
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
A A+G+ YL S K I+RD N+L+ + K++DFGLA+D +T
Sbjct: 139 SCAYQVARGMEYLASKKC--IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 139/308 (45%), Gaps = 46/308 (14%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ R + LG+G FG V+ G + T +A+K L ++ +L E + +
Sbjct: 8 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPE-AFLQEAQVM 56
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
+L H LV+L + ++ +V E+M KGSL + L Y++ L + M A
Sbjct: 57 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLR-LPQLVDM--AAQI 112
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY- 247
A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+ + + R +
Sbjct: 113 ASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFP 167
Query: 248 -GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKR 306
+ APE G T KSDV+SFG++L E+ + RV PY
Sbjct: 168 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN 210
Query: 307 RIFQVMDARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALEQIQDTNDA 362
R +V+D ++E Y + + L +C +P+ RPT + + LE + +
Sbjct: 211 R--EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 267
Query: 363 GVSRDESL 370
E+L
Sbjct: 268 QYQPGENL 275
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 134/292 (45%), Gaps = 46/292 (15%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ R + LG+G FG V+ G + T +A+K L ++ +L E + +
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPE-AFLQEAQVM 67
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
+L H LV+L + ++ +V E+M KGSL + L Y++ L + M +
Sbjct: 68 KKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLR-LPQLVDMAAQI-- 123
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY- 247
A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+ + + R +
Sbjct: 124 ASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFP 178
Query: 248 -GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKR 306
+ APE G T KSDV+SFG++L E+ + RV PY
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN 221
Query: 307 RIFQVMDARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALE 354
R +V+D ++E Y + + L +C +P+ RPT + + LE
Sbjct: 222 R--EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 121/296 (40%), Gaps = 55/296 (18%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWL 122
A +F LG+G FG V Y + ++A+K L + L+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 57
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQP 175
E++ L HPN+++L GY + L+ E+ P G++ L + A+YI
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L A L+Y HS +VI+RD K N+LL K++DFG + P+
Sbjct: 118 L------------ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 164 RD----TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------- 210
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ + Y + R F D EG L + L L + P RP + EV++
Sbjct: 211 TYQETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPMLREVLE 257
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 139/308 (45%), Gaps = 46/308 (14%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ R + LG+G FG V+ G + T +A+K L ++ +L E + +
Sbjct: 10 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPE-AFLQEAQVM 58
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
+L H LV+L + ++ +V E+M KGSL + L Y++ L + M A
Sbjct: 59 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLR-LPQLVDM--AAQI 114
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY- 247
A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+ + + R +
Sbjct: 115 ASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFP 169
Query: 248 -GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKR 306
+ APE G T KSDV+SFG++L E+ + RV PY
Sbjct: 170 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN 212
Query: 307 RIFQVMDARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALEQIQDTNDA 362
R +V+D ++E Y + + L +C +P+ RPT + + LE + +
Sbjct: 213 R--EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 269
Query: 363 GVSRDESL 370
E+L
Sbjct: 270 QYQPGENL 277
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 122/296 (41%), Gaps = 55/296 (18%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWL 122
A +F LG+G FG V Y + ++A+K L + L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQP 175
E++ L HPN+++L GY + L+ E+ P G++ L + A+YI
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L A L+Y HS +VI+RD K N+LL K++DFG + P+
Sbjct: 117 L------------ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
++ + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 163 RAALC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------- 209
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ + Y + R F D EG L + L L + P RP + EV++
Sbjct: 210 TYQETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPMLREVLE 256
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 108/226 (47%), Gaps = 36/226 (15%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL-----QGHLEWLT 123
N++ LGEG FG V + HT TG +A+K +N++ L QG +E
Sbjct: 15 NYQIVKTLGEGSFGKVKLAY---HT------TTGQKVALKIINKKVLAKSDMQGRIE--R 63
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYI---QPLSWTI 180
EI +L L HP+++KL D ++V E+ N LF YI +S
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-----GNELF----DYIVQRDKMSEQE 114
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ + Y H + K+++RD K N+LLD + N K++DFGL+ G+ S
Sbjct: 115 ARRFFQQIISAVEYCH--RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS 172
Query: 241 TRVMGTYGYAAPEYMATGHLTA--KSDVYSFGVVLLEMLSGRRVID 284
G+ YAAPE + +G L A + DV+S GV+L ML R D
Sbjct: 173 C---GSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 139/308 (45%), Gaps = 46/308 (14%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ R + LG+G FG V+ G + T +A+K L ++ +L E + +
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPE-AFLQEAQVM 67
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
+L H LV+L + ++ +V E+M KGSL + L Y++ L + M +
Sbjct: 68 KKLRHEKLVQLYA-VVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLR-LPQLVDMAAQI-- 123
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY- 247
A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+ + + R +
Sbjct: 124 ASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFP 178
Query: 248 -GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKR 306
+ APE G T KSDV+SFG++L E+ + RV PY
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN 221
Query: 307 RIFQVMDARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALEQIQDTNDA 362
R +V+D ++E Y + + L +C +P+ RPT + + LE + +
Sbjct: 222 R--EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
Query: 363 GVSRDESL 370
E+L
Sbjct: 279 QYQPGENL 286
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 107/219 (48%), Gaps = 19/219 (8%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT 123
K F VLG+G FG VF + + + + AR + A+K L + +L+ T
Sbjct: 20 KADPSQFELLKVLGQGSFGKVF--LVKKISGSDAR----QLYAMKVLKKATLKVRDRVRT 73
Query: 124 EIKH--LGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
+++ L ++ HP +VKL Y + + +L L+ +F+ G L L + + + + +
Sbjct: 74 KMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 132
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
A LA H +IYRD K NILLD + KL+DFGL+K+ + S
Sbjct: 133 -------AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS 185
Query: 241 TRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GT Y APE + T +D +SFGV++ EML+G
Sbjct: 186 --FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 139/308 (45%), Gaps = 46/308 (14%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ R + LG+G FG V+ G + T +A+K L ++ +L E + +
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPE-AFLQEAQVM 67
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
+L H LV+L + ++ +V E+M KGSL + L Y++ L + M +
Sbjct: 68 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLR-LPQLVDMAAQI-- 123
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY- 247
A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+ + + R +
Sbjct: 124 ASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFP 178
Query: 248 -GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKR 306
+ APE G T KSDV+SFG++L E+ + RV PY
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN 221
Query: 307 RIFQVMDARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALEQIQDTNDA 362
R +V+D ++E Y + + L +C +P+ RPT + + LE + +
Sbjct: 222 R--EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
Query: 363 GVSRDESL 370
E+L
Sbjct: 279 QYQPGENL 286
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 108/226 (47%), Gaps = 36/226 (15%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL-----QGHLEWLT 123
N++ LGEG FG V + HT TG +A+K +N++ L QG +E
Sbjct: 14 NYQIVKTLGEGSFGKVKLAY---HT------TTGQKVALKIINKKVLAKSDMQGRIE--R 62
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYI---QPLSWTI 180
EI +L L HP+++KL D ++V E+ N LF YI +S
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-----GNELF----DYIVQRDKMSEQE 113
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ + Y H + K+++RD K N+LLD + N K++DFGL+ G+ S
Sbjct: 114 ARRFFQQIISAVEYCH--RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS 171
Query: 241 TRVMGTYGYAAPEYMATGHLTA--KSDVYSFGVVLLEMLSGRRVID 284
G+ YAAPE + +G L A + DV+S GV+L ML R D
Sbjct: 172 C---GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 34/231 (14%)
Query: 69 NFRPDSVLGEGGFGCVF--KGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIK 126
+F P LG GGFG VF K +D+ YA R + + + L +E + + E+K
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKR----IRLPNRELAREKV------MREVK 55
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL----------FRTGASYIQPL 176
L +L HP +V+ LE + + PK L + + G I+
Sbjct: 56 ALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEER 115
Query: 177 SWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGL--AKDGPTG 234
++ + + L A+ + +LHS +++RD K SNI ++ K+ DFGL A D
Sbjct: 116 ERSVCLHIFLQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEE 173
Query: 235 SQSHVS--------TRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEML 277
Q+ ++ T +GT Y +PE + + K D++S G++L E+L
Sbjct: 174 EQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 23/219 (10%)
Query: 76 LGEGGFGCVFKGW---IDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
LGEG FG V ID+ +P + +AVK L ++ + L + ++E++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 132 -YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---TGASYI--------QPLSWT 179
H N++ L+G C +D ++ + KG+L +L G Y + +++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 180 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 239
+ A+G+ YL S K I+RD N+L+ N K++DFGLA+D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC--IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+T + APE + T +SDV+SFGV++ E+ +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 131/285 (45%), Gaps = 46/285 (16%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G + +T +A+K L ++ +L E + + +L H
Sbjct: 17 LGNGQFGEVWMGTWNGNTK----------VAIKTLKPGTMSPE-SFLEEAQIMKKLKHDK 65
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV+L + ++ +V E+M KGSL + L + G L + M A A G+AY+
Sbjct: 66 LVQLYA-VVSEEPIYIVTEYMNKGSLLDFL-KDGEGRALKLPNLVDM--AAQVAAGMAYI 121
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPE 253
++ I+RD +++NIL+ K++DFGLA+ + + R + + APE
Sbjct: 122 --ERMNYIHRDLRSANILVGNGLICKIADFGLAR---LIEDNEXTARQGAKFPIKWTAPE 176
Query: 254 YMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMD 313
G T KSDV+SFG++L E+++ RV PY R +V++
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELVTKGRV-----------------PYPGMNNR--EVLE 217
Query: 314 ARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALE 354
++E Y + + L I C +P+ RPT + + LE
Sbjct: 218 -QVERGYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLE 261
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 108/226 (47%), Gaps = 36/226 (15%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL-----QGHLEWLT 123
N++ LGEG FG V + HT TG +A+K +N++ L QG +E
Sbjct: 5 NYQIVKTLGEGSFGKVKLAY---HT------TTGQKVALKIINKKVLAKSDMQGRIE--R 53
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYI---QPLSWTI 180
EI +L L HP+++KL D ++V E+ N LF YI +S
Sbjct: 54 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-----GNELF----DYIVQRDKMSEQE 104
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ + Y H + K+++RD K N+LLD + N K++DFGL+ G+ S
Sbjct: 105 ARRFFQQIISAVEYCH--RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS 162
Query: 241 TRVMGTYGYAAPEYMATGHLTA--KSDVYSFGVVLLEMLSGRRVID 284
G+ YAAPE + +G L A + DV+S GV+L ML R D
Sbjct: 163 C---GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 30/213 (14%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLN--QESLQGHLEWLTEIKHLGQLY 132
+G G FG V+KG W + +AVK LN + Q + E+ L +
Sbjct: 16 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKVALGAAK 190
H N++ +GY +V ++ SL +HL T I+ + +A A+
Sbjct: 63 HVNILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQ 115
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ YLH+ +I+RD K++NI L + K+ DFGLA S SH ++ G+ +
Sbjct: 116 GMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 251 APEYMAT---GHLTAKSDVYSFGVVLLEMLSGR 280
APE + + +SDVY+FG+VL E+++G+
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 107/219 (48%), Gaps = 19/219 (8%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT 123
K F VLG+G FG VF + + + + AR + A+K L + +L+ T
Sbjct: 20 KADPSQFELLKVLGQGSFGKVF--LVKKISGSDAR----QLYAMKVLKKATLKVRDRVRT 73
Query: 124 EIKH--LGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
+++ L ++ HP +VKL Y + + +L L+ +F+ G L L + + + + +
Sbjct: 74 KMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 132
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
A LA H +IYRD K NILLD + KL+DFGL+K+ + S
Sbjct: 133 -------AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS 185
Query: 241 TRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GT Y APE + T +D +SFGV++ EML+G
Sbjct: 186 --FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 20/215 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+K RL+ E+ + EI
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 53
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
L +L HPN+VKL+ ++ LV+E + + L+ + AS + + +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEHVHQ-DLKTFM---DASALTGIPLPLIKSYLF 109
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ G T + T
Sbjct: 110 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVT 165
Query: 247 YGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
Y APE + + + D++S G + EM++ R
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 107/219 (48%), Gaps = 19/219 (8%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT 123
K F VLG+G FG VF + + + + AR + A+K L + +L+ T
Sbjct: 21 KADPSQFELLKVLGQGSFGKVF--LVKKISGSDAR----QLYAMKVLKKATLKVRDRVRT 74
Query: 124 EIKH--LGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
+++ L ++ HP +VKL Y + + +L L+ +F+ G L L + + + + +
Sbjct: 75 KMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 133
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
A LA H +IYRD K NILLD + KL+DFGL+K+ + S
Sbjct: 134 -------AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS 186
Query: 241 TRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GT Y APE + T +D +SFGV++ EML+G
Sbjct: 187 --FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 17/216 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL-YH 133
LGEG FG V + +P +AVK L ++ + L + ++E++ + + H
Sbjct: 25 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL-----------FRTGASYIQPLSWTIRM 182
N++ L+G C +D ++ E+ KG+L +L + + + LS +
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
A A+G+ YL S K I+RD N+L+ + K++DFGLA+D +T
Sbjct: 143 SCAYQVARGMEYLASKKC--IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 200
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 201 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 108/226 (47%), Gaps = 36/226 (15%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL-----QGHLEWLT 123
N++ LGEG FG V + HT TG +A+K +N++ L QG +E
Sbjct: 9 NYQIVKTLGEGSFGKVKLAY---HT------TTGQKVALKIINKKVLAKSDMQGRIE--R 57
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYI---QPLSWTI 180
EI +L L HP+++KL D ++V E+ N LF YI +S
Sbjct: 58 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-----GNELF----DYIVQRDKMSEQE 108
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ + Y H + K+++RD K N+LLD + N K++DFGL+ G+ S
Sbjct: 109 ARRFFQQIISAVEYCH--RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS 166
Query: 241 TRVMGTYGYAAPEYMATGHLTA--KSDVYSFGVVLLEMLSGRRVID 284
G+ YAAPE + +G L A + DV+S GV+L ML R D
Sbjct: 167 C---GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 17/216 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL-YH 133
LGEG FG V + +P +AVK L ++ + L + ++E++ + + H
Sbjct: 28 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL-----------FRTGASYIQPLSWTIRM 182
N++ L+G C +D ++ E+ KG+L +L + + + LS +
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
A A+G+ YL S K I+RD N+L+ + K++DFGLA+D +T
Sbjct: 146 SCAYQVARGMEYLASKKC--IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 203
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 204 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 122/296 (41%), Gaps = 55/296 (18%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWL 122
A +F LG+G FG V Y + ++A+K L + L+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQP 175
E++ L HPN+++L GY + L+ E+ P G++ L + A+YI
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L A L+Y HS +VI+RD K N+LL K+++FG + P+
Sbjct: 120 L------------ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR 165
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 166 R----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------- 212
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ + Y + R F D EG L + L L + P RP + EV++
Sbjct: 213 TYQETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPMLREVLE 259
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 121/296 (40%), Gaps = 55/296 (18%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWL 122
A +F LG+G FG V Y + ++A+K L + L+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQP 175
E++ L HPN+++L GY + L+ E+ P G++ L + A+YI
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L A L+Y HS +VI+RD K N+LL K++DFG + P+
Sbjct: 120 L------------ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 165
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 166 RXXLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------- 212
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ + Y + R F D EG L + L L + P RP + EV++
Sbjct: 213 TYQETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPMLREVLE 259
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL--QGHLEW-LTEIKHLGQL 131
VLG+G FG V R GT + A+K L ++ + +E + E + L L
Sbjct: 26 VLGKGSFGKVMLA---------DRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALL 76
Query: 132 YHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAK 190
P + + C + RL V E++ G L H+ + G + +P + ++++G
Sbjct: 77 DKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISIG--- 132
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR-VMGTYGY 249
L +LH K +IYRD K N++LD + K++DFG+ K+ V+TR GT Y
Sbjct: 133 -LFFLH--KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKE---HMMDGVTTREFCGTPDY 186
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVID 284
APE +A D +++GV+L EML+G+ D
Sbjct: 187 IAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 17/216 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL-YH 133
LGEG FG V + +P +AVK L ++ + L + ++E++ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL-----------FRTGASYIQPLSWTIRM 182
N++ L+G C +D ++ E+ KG+L +L + + + LS +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
A A+G+ YL S K I+RD N+L+ + K++DFGLA+D +T
Sbjct: 154 SCAYQVARGMEYLASKKC--IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 121/296 (40%), Gaps = 55/296 (18%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWL 122
A +F LG+G FG V Y + ++A+K L + L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQP 175
E++ L HPN+++L GY + L+ E+ P G++ L + A+YI
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L A L+Y HS +VI+RD K N+LL K++DFG + P+
Sbjct: 117 L------------ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 163 RXXLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------- 209
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ + Y + R F D EG L + L L + P RP + EV++
Sbjct: 210 TYQETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPMLREVLE 256
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 121/296 (40%), Gaps = 55/296 (18%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWL 122
A +F LG+G FG V Y + ++A+K L + L+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQP 175
E++ L HPN+++L GY + L+ E+ P G++ L + A+YI
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L A L+Y HS +VI+RD K N+LL K++DFG + P+
Sbjct: 120 L------------ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 165
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 166 RDDLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------- 212
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ + Y + R F D EG L + L L + P RP + EV++
Sbjct: 213 TYQETYKRISRVEFTFPDFVTEGARDLISRL---------LKHNPSQRPMLREVLE 259
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 17/216 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL-YH 133
LGEG FG V + +P +AVK L ++ + L + ++E++ + + H
Sbjct: 29 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL-----------FRTGASYIQPLSWTIRM 182
N++ L+G C +D ++ E+ KG+L +L + + + LS +
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
A A+G+ YL S K I+RD N+L+ + K++DFGLA+D +T
Sbjct: 147 SCAYQVARGMEYLASKKC--IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 204
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 205 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 133/307 (43%), Gaps = 60/307 (19%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW---LTEIKHLGQLY 132
+G G FG V Y V+A+K+++ Q + +W + E++ L +L
Sbjct: 62 IGHGSFGAV---------YFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
HPN ++ G L + LV E+ GS + L + +PL V GA +GL
Sbjct: 113 HPNTIQYRGCYLREHTAWLVMEYC-LGSASDLL----EVHKKPLQEVEIAAVTHGALQGL 167
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAP 252
AYLHS +I+RD K NILL KL DFG + S + +GT + AP
Sbjct: 168 AYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFG------SASIMAPANXFVGTPYWMAP 219
Query: 253 EY---MATGHLTAKSDVYSFGVVLLEMLSGRR--VIDKNRPSREHNLIEWAKPYLQSKRR 307
E M G K DV+S G+ +E L+ R+ + + N S +++ + P LQS
Sbjct: 220 EVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPLFNMNAMSALYHIAQNESPALQS--- 275
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK------------ALEQ 355
G +S + V + CL P+ RPT + ++K ++
Sbjct: 276 ----------GHWS--EYFRNFVDS--CLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDL 321
Query: 356 IQDTNDA 362
IQ T DA
Sbjct: 322 IQRTKDA 328
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 17/216 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL-YH 133
LGEG FG V + +P +AVK L ++ + L + ++E++ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL-----------FRTGASYIQPLSWTIRM 182
N++ L+G C +D ++ E+ KG+L +L + + + LS +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
A A+G+ YL S K I+RD N+L+ + K++DFGLA+D +T
Sbjct: 154 SCAYQVARGMEYLASKKC--IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 133/292 (45%), Gaps = 46/292 (15%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ R + LG+G FG V+ G + T +A+K L ++ +L E + +
Sbjct: 186 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGNMSPE-AFLQEAQVM 234
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
+L H LV+L + ++ +V E+M KGSL + L Y++ L + M +
Sbjct: 235 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLR-LPQLVDMAAQI-- 290
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY- 247
A G+AY+ ++ ++RD + +NIL+ N K++DFGL G + + R +
Sbjct: 291 ASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGL---GRLIEDNEYTARQGAKFP 345
Query: 248 -GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKR 306
+ APE G T KSDV+SFG++L E+ + RV PY
Sbjct: 346 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN 388
Query: 307 RIFQVMDARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALE 354
R +V+D ++E Y + + L +C +P+ RPT + + LE
Sbjct: 389 R--EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 437
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 17/216 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL-YH 133
LGEG FG V + +P +AVK L ++ + L + ++E++ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---TGASYI--------QPLSWTIRM 182
N++ L+G C +D ++ E+ KG+L +L G Y + LS +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
A A+G+ YL S K I+RD N+L+ + K++DFGLA+D +T
Sbjct: 154 SCAYQVARGMEYLASKKC--IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 113/252 (44%), Gaps = 46/252 (18%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLEWLT 123
N+R +G+G F V + H TG +AVK +LN SLQ +
Sbjct: 16 NYRLQKTIGKGNFAKV---KLARHVL------TGREVAVKIIDKTQLNPTSLQ---KLFR 63
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E++ + L HPN+VKL + LV E+ G + ++L G RMK
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-----------RMK 112
Query: 184 VALGAAK------GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQS 237
AK + Y H + +++RD K N+LLD + N K++DFG + + G++
Sbjct: 113 EKEARAKFRQIVSAVQYCH--QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKL 170
Query: 238 HVSTRVMGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIE 296
G+ YAAPE + + + DV+S GV+L ++SG + P NL E
Sbjct: 171 DT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 221
Query: 297 WAKPYLQSKRRI 308
+ L+ K RI
Sbjct: 222 LRERVLRGKYRI 233
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 134/292 (45%), Gaps = 46/292 (15%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ R + LG+G FG V+ G + T +A+K L ++ +L E + +
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPE-AFLQEAQVM 67
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
++ H LV+L + ++ +V E+M KGSL + L Y++ L + M +
Sbjct: 68 KKIRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLR-LPQLVDMAAQI-- 123
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY- 247
A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+ + + R +
Sbjct: 124 ASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFP 178
Query: 248 -GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKR 306
+ APE G T KSDV+SFG++L E+ + RV PY
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN 221
Query: 307 RIFQVMDARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALE 354
R +V+D ++E Y + + L +C +P+ RPT + + LE
Sbjct: 222 R--EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 95/209 (45%), Gaps = 23/209 (11%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT--EIKHLGQLY 132
++GEG +G V K TG ++A+K+ + ++ + EIK L QL
Sbjct: 32 LVGEGSYGMVMKC---------RNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLEN-HLFRTGASYIQPLSWTIRMKVALGAAKG 191
H NLV L+ C + LV+EF+ L++ LF G L + + K G
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG------LDYQVVQKYLFQIING 136
Query: 192 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 251
+ + HS +I+RD K NIL+ + KL DFG A+ + V + T Y A
Sbjct: 137 IGFCHS--HNIIHRDIKPENILVSQSGVVKLCDFGFAR--TLAAPGEVYDDEVATRWYRA 192
Query: 252 PEYMATGHLTAKS-DVYSFGVVLLEMLSG 279
PE + K+ DV++ G ++ EM G
Sbjct: 193 PELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 23/219 (10%)
Query: 76 LGEGGFGCVFKGW---IDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
LGEG FG V ID+ +P + +AVK L ++ + L + ++E++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 132 -YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---TGASYI--------QPLSWT 179
H N++ L+G C +D ++ + KG+L +L G Y + +++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 180 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 239
+ A+G+ YL S K I+RD N+L+ N K++DFGLA+D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC--IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+T + APE + T +SDV+SFGV++ E+ +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 133/307 (43%), Gaps = 60/307 (19%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW---LTEIKHLGQLY 132
+G G FG V Y V+A+K+++ Q + +W + E++ L +L
Sbjct: 23 IGHGSFGAV---------YFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
HPN ++ G L + LV E+ GS + L + +PL V GA +GL
Sbjct: 74 HPNTIQYRGCYLREHTAWLVMEYC-LGSASDLL----EVHKKPLQEVEIAAVTHGALQGL 128
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAP 252
AYLHS +I+RD K NILL KL DFG + S + +GT + AP
Sbjct: 129 AYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFG------SASIMAPANXFVGTPYWMAP 180
Query: 253 EY---MATGHLTAKSDVYSFGVVLLEMLSGRR--VIDKNRPSREHNLIEWAKPYLQSKRR 307
E M G K DV+S G+ +E L+ R+ + + N S +++ + P LQS
Sbjct: 181 EVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPLFNMNAMSALYHIAQNESPALQS--- 236
Query: 308 IFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK------------ALEQ 355
G +S + V + CL P+ RPT + ++K ++
Sbjct: 237 ----------GHWS--EYFRNFVDS--CLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDL 282
Query: 356 IQDTNDA 362
IQ T DA
Sbjct: 283 IQRTKDA 289
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 138/308 (44%), Gaps = 46/308 (14%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ R + LG+G FG V+ G + T +A+K L ++ +L E + +
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPE-AFLQEAQVM 67
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
+L H LV+L + ++ +V E+M KG L + L Y++ L + M +
Sbjct: 68 KKLRHEKLVQLYA-VVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLR-LPQLVDMAAQI-- 123
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY- 247
A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+ + + R +
Sbjct: 124 ASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFP 178
Query: 248 -GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKR 306
+ APE G T KSDV+SFG++L E+ + RV PY
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN 221
Query: 307 RIFQVMDARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALEQIQDTNDA 362
R +V+D ++E Y + + L +C +P+ RPT + + LE + +
Sbjct: 222 R--EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
Query: 363 GVSRDESL 370
E+L
Sbjct: 279 QYQPGENL 286
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 26/210 (12%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
+G G FG V+KG W H + ++ V E Q + E+ L + H
Sbjct: 44 IGSGSFGTVYKGKW---HGDVAVK-----ILKVVDPTPEQFQA---FRNEVAVLRKTRHV 92
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTI--RMKVALGAAKGL 192
N++ +GY + D+ +V ++ SL HL ++Q + + + +A A+G+
Sbjct: 93 NILLFMGY-MTKDNLAIVTQWCEGSSLYKHL------HVQETKFQMFQLIDIARQTAQGM 145
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAP 252
YLH+ +I+RD K++NI L K+ DFGLA S S + G+ + AP
Sbjct: 146 DYLHA--KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAP 203
Query: 253 EYMA---TGHLTAKSDVYSFGVVLLEMLSG 279
E + + +SDVYS+G+VL E+++G
Sbjct: 204 EVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 20/218 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L +L HPN+VKL+ ++ LV+E + + L+ + AS + + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFM---DASALTGIPLPLIKS 110
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 111 YLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
T Y APE + + + D++S G + EM++ R
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 126/304 (41%), Gaps = 46/304 (15%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIKHLGQL-YH 133
LG G FG V I+ + + T +AVK L + + H ++E+K L + +H
Sbjct: 36 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 91
Query: 134 PNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHL---------FRTGAS-YIQPLSWTIRM 182
N+V L+G C + L+V EF G+L +L ++T Y L+ +
Sbjct: 92 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLI 151
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
+ AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 152 CYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYL 302
+ APE + T +SDV+SFGV+L E+ S A PY
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASPYP 252
Query: 303 QSK------RRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
K RR+ + R Y+ +T + C EP RPT E+V+ L +
Sbjct: 253 GVKIDEEFCRRLKEGTRMRAP-DYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLGNL 308
Query: 357 QDTN 360
N
Sbjct: 309 LQAN 312
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 126/304 (41%), Gaps = 41/304 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES-LQGHLEWLTEIKHLGQL-YH 133
LG G FG V ++ Y + M +AVK L + L ++E+K L L H
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRM----------- 182
N+V L+G C L++ E+ G L N L R S+I + M
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 183 --KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ AKG+A+L S I+RD NILL K+ DFGLA+ S V
Sbjct: 170 LLSFSYQVAKGMAFLASKNC--IHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 241 TRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRP--SREHNLIEWA 298
+ APE + T +SDV+S+G+ L E+ S P S+ + +I+
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 287
Query: 299 KPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE-QIQ 357
L + ++ D +KT C +P RPT ++V+ +E QI
Sbjct: 288 FRMLSPEHAPAEMYD-----------IMKT------CWDADPLKRPTFKQIVQLIEKQIS 330
Query: 358 DTND 361
++ +
Sbjct: 331 ESTN 334
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 27/208 (12%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN--QESLQGHLEWLTEIKHLGQLYH 133
LG G FG V+ G+ + T +AVK L S+Q LE E + L H
Sbjct: 21 LGAGQFGEVWMGYYNNST----------KVAVKTLKPGTMSVQAFLE---EANLMKTLQH 67
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL-FRTGASYIQPLSWTIRMKVALGAAKGL 192
LV+L ++ ++ E+M KGSL + L G + P ++A +G+
Sbjct: 68 DKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA----EGM 123
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYA 250
AY+ ++ I+RD + +N+L+ + K++DFGLA+ + + R + +
Sbjct: 124 AYI--ERKNYIHRDLRAANVLVSESLMCKIADFGLAR---VIEDNEYTAREGAKFPIKWT 178
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLS 278
APE + G T KSDV+SFG++L E+++
Sbjct: 179 APEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 133/292 (45%), Gaps = 46/292 (15%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ R + LG+G FG V+ G + T +A+K L ++ +L E + +
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPE-AFLQEAQVM 67
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
+L H LV+L + ++ +V E+M KGSL + L Y++ L + M +
Sbjct: 68 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLR-LPQLVDMAAQI-- 123
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY- 247
A G+AY+ ++ ++RD +NIL+ N K++DFGLA+ + + R +
Sbjct: 124 ASGMAYV--ERMNYVHRDLAAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFP 178
Query: 248 -GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKR 306
+ APE G T KSDV+SFG++L E+ + RV PY
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN 221
Query: 307 RIFQVMDARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALE 354
R +V+D ++E Y + + L +C +P+ RPT + + LE
Sbjct: 222 R--EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 127/295 (43%), Gaps = 58/295 (19%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLEWLT 123
N+R +G+G F K + H TG +AVK +LN SLQ +
Sbjct: 15 NYRLLKTIGKGNFA---KVKLARHIL------TGKEVAVKIIDKTQLNSSSLQ---KLFR 62
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E++ + L HPN+VKL + LV E+ G + ++L G RMK
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-----------RMK 111
Query: 184 VALGAAK------GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQS 237
AK + Y H + +++RD K N+LLD + N K++DFG + + G++
Sbjct: 112 EKEARAKFRQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL 169
Query: 238 HVSTRVMGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIE 296
G+ YAAPE + + + DV+S GV+L ++SG + P NL E
Sbjct: 170 DT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 220
Query: 297 WAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ L+ K RI M E L K L P R T+++++K
Sbjct: 221 LRERVLRGKYRIPFYMSTDCEN------------LLKKFLILNPSKRGTLEQIMK 263
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 17/216 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL-YH 133
LGEG FG V + +P +AVK L ++ + L + ++E++ + + H
Sbjct: 77 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL-----------FRTGASYIQPLSWTIRM 182
N++ L+G C +D ++ E+ KG+L +L + + + LS +
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
A A+G+ YL S K I+RD N+L+ + K++DFGLA+D +T
Sbjct: 195 SCAYQVARGMEYLASKKC--IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 127/295 (43%), Gaps = 58/295 (19%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLEWLT 123
N+R +G+G F K + H TG +AVK +LN SLQ +
Sbjct: 15 NYRLLKTIGKGNFA---KVKLARHIL------TGKEVAVKIIDKTQLNSSSLQ---KLFR 62
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E++ + L HPN+VKL + LV E+ G + ++L G RMK
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-----------RMK 111
Query: 184 VALGAAK------GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQS 237
AK + Y H + +++RD K N+LLD + N K++DFG + + G++
Sbjct: 112 EKEARAKFRQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL 169
Query: 238 HVSTRVMGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIE 296
G+ YAAPE + + + DV+S GV+L ++SG + P NL E
Sbjct: 170 DT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 220
Query: 297 WAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ L+ K RI M E L K L P R T+++++K
Sbjct: 221 LRERVLRGKYRIPFYMSTDCEN------------LLKKFLILNPSKRGTLEQIMK 263
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 27/212 (12%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN--QESLQGHLEWLTEIKHLGQLYH 133
LG G FG V+ G+ + T +AVK L S+Q LE E + L H
Sbjct: 20 LGAGQFGEVWMGYYNNST----------KVAVKTLKPGTMSVQAFLE---EANLMKTLQH 66
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL-FRTGASYIQPLSWTIRMKVALGAAKGL 192
LV+L +++ ++ EFM KGSL + L G + P ++A +G+
Sbjct: 67 DKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA----EGM 122
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYA 250
AY+ ++ I+RD + +N+L+ + K++DFGLA+ + + R + +
Sbjct: 123 AYI--ERKNYIHRDLRAANVLVSESLMCKIADFGLAR---VIEDNEYTAREGAKFPIKWT 177
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLSGRRV 282
APE + G T KS+V+SFG++L E+++ ++
Sbjct: 178 APEAINFGCFTIKSNVWSFGILLYEIVTYGKI 209
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 34/246 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLEWLT 123
N+R +G+G F V + H TG +A+K +LN SLQ +
Sbjct: 13 NYRLLKTIGKGNFAKV---KLARHIL------TGREVAIKIIDKTQLNPTSLQ---KLFR 60
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E++ + L HPN+VKL + L+ E+ G + ++L G + R
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI 120
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
V+ + Y H + ++++RD K N+LLD + N K++DFG + + G +
Sbjct: 121 VS-----AVQYCH--QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT---F 170
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYL 302
G+ YAAPE + + + DV+S GV+L ++SG + P NL E + L
Sbjct: 171 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVL 224
Query: 303 QSKRRI 308
+ K RI
Sbjct: 225 RGKYRI 230
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 138/308 (44%), Gaps = 46/308 (14%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ R + LG+G FG V+ G + T +A+K L ++ +L E + +
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPE-AFLQEAQVM 67
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
+L H LV+L + ++ +V E+M KG L + L Y++ L + M +
Sbjct: 68 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLR-LPQLVDMAAQI-- 123
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY- 247
A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+ + + R +
Sbjct: 124 ASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFP 178
Query: 248 -GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKR 306
+ APE G T KSDV+SFG++L E+ + RV PY
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV-----------------PYPGMVN 221
Query: 307 RIFQVMDARIEGQYSLGAALKTAV----LAIKCLSNEPKFRPTMDEVVKALEQIQDTNDA 362
R +V+D ++E Y + + L +C +P+ RPT + + LE + +
Sbjct: 222 R--EVLD-QVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 278
Query: 363 GVSRDESL 370
E+L
Sbjct: 279 QYQPGENL 286
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 126/306 (41%), Gaps = 49/306 (16%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIKHLGQL-YH 133
LG G FG V I+ + + T +AVK L + + H ++E+K L + +H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 134 PNLVKLIGYCLEDDHRLLVY-EFMPKGSLENHLFRTGASYIQP------------LSWTI 180
N+V L+G C + L+V EF G+L +L R+ + P L+
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ + AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 141 LICYSFQVAKGMEFLASRKC--IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 241 TRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKP 300
+ APE + T +SDV+SFGV+L E+ S A P
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASP 241
Query: 301 YLQSK------RRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE 354
Y K RR+ + R Y+ +T + C EP RPT E+V+ L
Sbjct: 242 YPGVKIDEEFCRRLKEGTRMRAP-DYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLG 297
Query: 355 QIQDTN 360
+ N
Sbjct: 298 NLLQAN 303
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 111/246 (45%), Gaps = 34/246 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLEWLT 123
N+R +G+G F K + H TG +A+K +LN SLQ +
Sbjct: 16 NYRLLKTIGKGNFA---KVKLARHIL------TGREVAIKIIDKTQLNPTSLQ---KLFR 63
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E++ + L HPN+VKL + L+ E+ G + ++L G + R
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI 123
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
V+ + Y H + ++++RD K N+LLD + N K++DFG + + G +
Sbjct: 124 VS-----AVQYCH--QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA---F 173
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYL 302
G YAAPE + + + DV+S GV+L ++SG + P NL E + L
Sbjct: 174 CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVL 227
Query: 303 QSKRRI 308
+ K RI
Sbjct: 228 RGKYRI 233
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 110/238 (46%), Gaps = 26/238 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ-ESLQGHLEWLTEIKH 127
+F+ S+LGEG +G V T+ P TG ++A+K++ + L L EIK
Sbjct: 12 DFQLKSLLGEGAYGVVCSA-----THKP----TGEIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALG 187
L H N++ + D ++ + ++ L R ++ Q LS
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST--QMLSDDHIQYFIYQ 120
Query: 188 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---------DGPTGSQSH 238
+ + LH + VI+RD K SN+L++ N + K+ DFGLA+ PTG QS
Sbjct: 121 TLRAVKVLHG--SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ T + T Y APE M T +++ DV+S G +L E+ RR I R R L+
Sbjct: 179 M-TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLL 234
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 126/306 (41%), Gaps = 49/306 (16%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIKHLGQL-YH 133
LG G FG V I+ + + T +AVK L + + H ++E+K L + +H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 134 PNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQP------------LSWTI 180
N+V L+G C + L+V EF G+L +L R+ + P L+
Sbjct: 82 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ + AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 141 LICYSFQVAKGMEFLASRKC--IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 241 TRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKP 300
+ APE + T +SDV+SFGV+L E+ S A P
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASP 241
Query: 301 YLQSK------RRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE 354
Y K RR+ + R Y+ +T + C EP RPT E+V+ L
Sbjct: 242 YPGVKIDEEFCRRLKEGTRMRAP-DYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLG 297
Query: 355 QIQDTN 360
+ N
Sbjct: 298 NLLQAN 303
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 126/295 (42%), Gaps = 58/295 (19%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLEWLT 123
N+R +G+G F V + H TG +AVK +LN SLQ +
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHIL------TGKEVAVKIIDKTQLNSSSLQ---KLFR 62
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E++ + L HPN+VKL + LV E+ G + ++L G RMK
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-----------RMK 111
Query: 184 VALGAAK------GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQS 237
AK + Y H + +++RD K N+LLD + N K++DFG + + G++
Sbjct: 112 EKEARAKFRQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL 169
Query: 238 HVSTRVMGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIE 296
G YAAPE + + + DV+S GV+L ++SG + P NL E
Sbjct: 170 DA---FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 220
Query: 297 WAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ L+ K RI M E L K L P R T+++++K
Sbjct: 221 LRERVLRGKYRIPFYMSTDCEN------------LLKKFLILNPSKRGTLEQIMK 263
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 126/302 (41%), Gaps = 45/302 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIKHLGQL-YH 133
LG G FG V I+ + + T +AVK L + + H ++E+K L + +H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 134 PNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQP--------LSWTIRMKV 184
N+V L+G C + L+V EF G+L +L R+ + P L+ +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 244
+ AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 150 SFQVAKGMEFLASRKX--IHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDAR 207
Query: 245 GTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQS 304
+ APE + T +SDV+SFGV+L E+ S A PY
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASPYPGV 250
Query: 305 K------RRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQD 358
K RR+ + R Y+ +T + C EP RPT E+V+ L +
Sbjct: 251 KIDEEFXRRLKEGTRMRAP-DYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLGNLLQ 306
Query: 359 TN 360
N
Sbjct: 307 AN 308
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 126/306 (41%), Gaps = 49/306 (16%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIKHLGQL-YH 133
LG G FG V I+ + + T +AVK L + + H ++E+K L + +H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 134 PNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQP------------LSWTI 180
N+V L+G C + L+V EF G+L +L R+ + P L+
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ + AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 150 LICYSFQVAKGMEFLASRKC--IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 241 TRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKP 300
+ APE + T +SDV+SFGV+L E+ S A P
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASP 250
Query: 301 YLQSK------RRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE 354
Y K RR+ + R Y+ +T + C EP RPT E+V+ L
Sbjct: 251 YPGVKIDEEFCRRLKEGTRMRAP-DYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLG 306
Query: 355 QIQDTN 360
+ N
Sbjct: 307 NLLQAN 312
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 110/238 (46%), Gaps = 26/238 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ-ESLQGHLEWLTEIKH 127
+F+ S+LGEG +G V T+ P TG ++A+K++ + L L EIK
Sbjct: 12 DFQLKSLLGEGAYGVVCSA-----THKP----TGEIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALG 187
L H N++ + D ++ + ++ L R ++ Q LS
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST--QMLSDDHIQYFIYQ 120
Query: 188 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---------DGPTGSQSH 238
+ + LH + VI+RD K SN+L++ N + K+ DFGLA+ PTG QS
Sbjct: 121 TLRAVKVLHG--SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ T + T Y APE M T +++ DV+S G +L E+ RR I R R L+
Sbjct: 179 M-TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLL 234
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 24/218 (11%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE---SLQGHLEWLTEI 125
+F S LG G G V T RP +G+++A K ++ E +++ + + E+
Sbjct: 17 DFERISELGAGNGGVV--------TKVQHRP-SGLIMARKLIHLEIKPAIRNQI--IREL 65
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
+ L + P +V G D + E M GSL+ L + + I KV+
Sbjct: 66 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEA-----KRIPEEILGKVS 120
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 245
+ +GLAYL +K ++++RD K SNIL++ KL DFG++ ++ +G
Sbjct: 121 IAVLRGLAYLR-EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQ----LIDSMANSFVG 175
Query: 246 TYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
T Y APE + H + +SD++S G+ L+E+ GR I
Sbjct: 176 TRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 127/295 (43%), Gaps = 58/295 (19%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLEWLT 123
N+R +G+G F K + H TG +AV+ +LN SLQ +
Sbjct: 15 NYRLLKTIGKGNFA---KVKLARHIL------TGKEVAVRIIDKTQLNSSSLQ---KLFR 62
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E++ + L HPN+VKL + LV E+ G + ++L G RMK
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-----------RMK 111
Query: 184 VALGAAK------GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQS 237
AK + Y H + +++RD K N+LLD + N K++DFG + + G++
Sbjct: 112 EKEARAKFRQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL 169
Query: 238 HVSTRVMGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIE 296
G+ YAAPE + + + DV+S GV+L ++SG + P NL E
Sbjct: 170 DT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 220
Query: 297 WAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ L+ K RI M E L K L P R T+++++K
Sbjct: 221 LRERVLRGKYRIPFYMSTDCEN------------LLKKFLILNPSKRGTLEQIMK 263
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 126/302 (41%), Gaps = 45/302 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIKHLGQL-YH 133
LG G FG V I+ + + T +AVK L + + H ++E+K L + +H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 134 PNLVKLIGYCLEDDHRLLVY-EFMPKGSLENHLFRTGASYIQP--------LSWTIRMKV 184
N+V L+G C + L+V EF G+L +L R+ + P L+ +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 244
+ AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 150 SFQVAKGMEFLASRKX--IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 207
Query: 245 GTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQS 304
+ APE + T +SDV+SFGV+L E+ S A PY
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASPYPGV 250
Query: 305 K------RRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQD 358
K RR+ + R Y+ +T + C EP RPT E+V+ L +
Sbjct: 251 KIDEEFCRRLKEGTRMRAP-DYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLGNLLQ 306
Query: 359 TN 360
N
Sbjct: 307 AN 308
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 127/295 (43%), Gaps = 58/295 (19%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLEWLT 123
N+R +G+G F V + H TG +AV+ +LN SLQ +
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHIL------TGKEVAVRIIDKTQLNSSSLQ---KLFR 62
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E++ + L HPN+VKL + LV E+ G + ++L G RMK
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-----------RMK 111
Query: 184 VALGAAK------GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQS 237
AK + Y H + +++RD K N+LLD + N K++DFG + + G++
Sbjct: 112 EKEARAKFRQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK- 168
Query: 238 HVSTRVMGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIE 296
G+ YAAPE + + + DV+S GV+L ++SG + P NL E
Sbjct: 169 --LDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 220
Query: 297 WAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ L+ K RI M E L K L P R T+++++K
Sbjct: 221 LRERVLRGKYRIPFYMSTDCEN------------LLKKFLILNPSKRGTLEQIMK 263
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL----TEIKHLGQL 131
LG G FG V G +H TG +AVK LN++ ++ L+ + EI++L
Sbjct: 24 LGVGTFGKVKVG---KHEL------TGHKVAVKILNRQKIRS-LDVVGKIRREIQNLKLF 73
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKG 191
HP+++KL +V E++ G L +++ + G L ++ G
Sbjct: 74 RHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR-----LDEKESRRLFQQILSG 128
Query: 192 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 251
+ Y H + V++RD K N+LLD + NAK++DFGL+ G S G+ YAA
Sbjct: 129 VDYCH--RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAA 183
Query: 252 PEYMATGHLTA--KSDVYSFGVVLLEMLSGRRVIDKN 286
PE + +G L A + D++S GV+L +L G D +
Sbjct: 184 PE-VISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD 219
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 111/238 (46%), Gaps = 30/238 (12%)
Query: 52 GSNIKSFSFNG----LKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAV 107
+ I F NG +K NF VLG+G FG V R GT + AV
Sbjct: 323 ANTISKFDNNGNRDRMKLTDFNFL--MVLGKGSFGKVM---------LSERKGTDELYAV 371
Query: 108 KRLNQESL--QGHLEW-LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLEN 163
K L ++ + +E + E + L P + + C + RL V E++ G L
Sbjct: 372 KILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMY 431
Query: 164 HLFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLS 223
H+ + G + +P + ++A+G L +L S +IYRD K N++LD + K++
Sbjct: 432 HIQQVG-RFKEPHAVFYAAEIAIG----LFFLQS--KGIIYRDLKLDNVMLDSEGHIKIA 484
Query: 224 DFGLAKDGPTGSQSHVSTRVM-GTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
DFG+ K+ V+T+ GT Y APE +A D ++FGV+L EML+G+
Sbjct: 485 DFGMCKE---NIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 37/214 (17%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWLTEIKHLGQLY 132
LG+G FG V Y + ++A+K L + L+ + E++ L
Sbjct: 20 LGKGKFGNV---------YLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQPLSWTIRMKVA 185
HPN+++L GY + L+ E+ P G++ L + A+YI L
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL--------- 121
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 245
A L+Y HS + VI+RD K N+LL N K++DFG + P+ + T + G
Sbjct: 122 ---ANALSYCHSKR--VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCG 172
Query: 246 TYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
T Y PE + K D++S GV+ E L G
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 126/306 (41%), Gaps = 49/306 (16%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIKHLGQL-YH 133
LG G FG V I+ + + T +AVK L + + H ++E+K L + +H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 134 PNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQP------------LSWTI 180
N+V L+G C + L+V EF G+L +L R+ + P L+
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ + AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 150 LICYSFQVAKGMEFLASRKC--IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRK 207
Query: 241 TRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKP 300
+ APE + T +SDV+SFGV+L E+ S A P
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASP 250
Query: 301 YLQSK------RRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE 354
Y K RR+ + R Y+ +T + C EP RPT E+V+ L
Sbjct: 251 YPGVKIDEEFCRRLKEGTRMRAP-DYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLG 306
Query: 355 QIQDTN 360
+ N
Sbjct: 307 NLLQAN 312
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
D LG G FG V KG+ + + I N +L+ L L E + QL
Sbjct: 32 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALKDEL--LAEANVMQQLD 86
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
+P +V++IG C E + +LV E G L +L + + + +++ + G+
Sbjct: 87 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGM 140
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYA 250
YL +++ ++RD N+LL + AK+SDFGL+K +++ + G + +
Sbjct: 141 KYL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWY 197
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLS 278
APE + ++KSDV+SFGV++ E S
Sbjct: 198 APECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
D LG G FG V KG+ + + I N +L+ L L E + QL
Sbjct: 32 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALKDEL--LAEANVMQQLD 86
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
+P +V++IG C E + +LV E G L +L + + + +++ + G+
Sbjct: 87 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGM 140
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYA 250
YL +++ ++RD N+LL + AK+SDFGL+K +++ + G + +
Sbjct: 141 KYL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWY 197
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLS 278
APE + ++KSDV+SFGV++ E S
Sbjct: 198 APECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 126/289 (43%), Gaps = 46/289 (15%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLEWLT 123
N+R +G+G F K + H TG +AVK +LN SLQ +
Sbjct: 8 NYRLLKTIGKGNFA---KVKLARHIL------TGKEVAVKIIDKTQLNSSSLQ---KLFR 55
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E++ + L HPN+VKL + LV E+ G + ++L G + R
Sbjct: 56 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQI 115
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
V+ + Y H + +++RD K N+LLD + N K++DFG + + G++
Sbjct: 116 VS-----AVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---F 165
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYL 302
G+ YAAPE + + + DV+S GV+L ++SG + P NL E + L
Sbjct: 166 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVL 219
Query: 303 QSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
+ K RI M E L K L P R T+++++K
Sbjct: 220 RGKYRIPFYMSTDCEN------------LLKKFLILNPSKRGTLEQIMK 256
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
D LG G FG V KG+ + + I N +L+ L L E + QL
Sbjct: 374 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALKDEL--LAEANVMQQLD 428
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
+P +V++IG C E + +LV E G L +L + + + +++ + G+
Sbjct: 429 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGM 482
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYA 250
YL +++ ++RD N+LL + AK+SDFGL+K +++ + G + +
Sbjct: 483 KYL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWY 539
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLS 278
APE + ++KSDV+SFGV++ E S
Sbjct: 540 APECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 126/306 (41%), Gaps = 49/306 (16%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIKHLGQL-YH 133
LG G FG V I+ + + T +AVK L + + H ++E+K L + +H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 134 PNLVKLIGYCLEDDHRLLVY-EFMPKGSLENHLFRTGASYIQP------------LSWTI 180
N+V L+G C + L+V EF G+L +L R+ + P L+
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ + AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 141 LICYSFQVAKGMEFLASRKC--IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 198
Query: 241 TRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKP 300
+ APE + T +SDV+SFGV+L E+ S A P
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASP 241
Query: 301 YLQSK------RRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE 354
Y K RR+ + R Y+ +T + C EP RPT E+V+ L
Sbjct: 242 YPGVKIDEEFCRRLKEGTRMRAP-DYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLG 297
Query: 355 QIQDTN 360
+ N
Sbjct: 298 NLLQAN 303
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 107/233 (45%), Gaps = 15/233 (6%)
Query: 65 TATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-LT 123
+++ F+ LG G + V+KG TG+ +A+K + +S +G +
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKG---------LNKTTGVYVALKEVKLDSEEGTPSTAIR 52
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI + +L H N+V+L ++ LV+EFM + RT + + L +
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKY 112
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
+GLA+ H +K +++RD K N+L++ KL DFGLA+ + S V
Sbjct: 113 FQWQLLQGLAFCHENK--ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV 170
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
T Y AP+ M + + D++S G +L EM++G+ + + LI
Sbjct: 171 --TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 126/306 (41%), Gaps = 49/306 (16%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIKHLGQL-YH 133
LG G FG V I+ + + T +AVK L + + H ++E+K L + +H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 134 PNLVKLIGYCLEDDHRLLVY-EFMPKGSLENHLFRTGASYIQP------------LSWTI 180
N+V L+G C + L+V EF G+L +L R+ + P L+
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ + AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 141 LICYSFQVAKGMEFLASRKC--IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 198
Query: 241 TRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKP 300
+ APE + T +SDV+SFGV+L E+ S A P
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASP 241
Query: 301 YLQSK------RRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE 354
Y K RR+ + R Y+ +T + C EP RPT E+V+ L
Sbjct: 242 YPGVKIDEEFCRRLKEGTRMRAP-DYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLG 297
Query: 355 QIQDTN 360
+ N
Sbjct: 298 NLLQAN 303
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
D LG G FG V KG+ + + I N +L+ L L E + QL
Sbjct: 30 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALKDEL--LAEANVMQQLD 84
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
+P +V++IG C E + +LV E G L +L + + + +++ + G+
Sbjct: 85 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGM 138
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYA 250
YL +++ ++RD N+LL + AK+SDFGL+K +++ + G + +
Sbjct: 139 KYL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWY 195
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLS 278
APE + ++KSDV+SFGV++ E S
Sbjct: 196 APECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 130/314 (41%), Gaps = 72/314 (22%)
Query: 69 NFRPDSVLGEGGFGCVFKG--WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIK 126
+F+ ++G GGFG VFK ID TY R VK N+++ + E+K
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRR--------VKYNNEKAER-------EVK 57
Query: 127 HLGQLYHPNLVKLIGYCLE--------DDHRLLVYEFMPKGSLENHLFRTGASYIQ---- 174
L +L H N+V G C + D L ++ P+ S + +T +IQ
Sbjct: 58 ALAKLDHVNIVHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFC 116
Query: 175 ---------------PLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN 219
L + +++ KG+ Y+HS K+I+RD K SNI L
Sbjct: 117 DKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS--KKLIHRDLKPSNIFLVDTKQ 174
Query: 220 AKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
K+ DFGL + TR GT Y +PE +++ + D+Y+ G++L E+L
Sbjct: 175 VKIGDFGLVTSLKNDGKR---TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL-- 229
Query: 280 RRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNE 339
V D E +K + D R +G S K L K LS +
Sbjct: 230 -HVCD--------TAFETSKFF----------TDLR-DGIISDIFDKKEKTLLQKLLSKK 269
Query: 340 PKFRPTMDEVVKAL 353
P+ RP E+++ L
Sbjct: 270 PEDRPNTSEILRTL 283
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
D LG G FG V KG+ + + I N +L+ L L E + QL
Sbjct: 375 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALKDEL--LAEANVMQQLD 429
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
+P +V++IG C E + +LV E G L +L + + + +++ + G+
Sbjct: 430 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGM 483
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYA 250
YL +++ ++RD N+LL + AK+SDFGL+K +++ + G + +
Sbjct: 484 KYL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWY 540
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLS 278
APE + ++KSDV+SFGV++ E S
Sbjct: 541 APECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 126/306 (41%), Gaps = 49/306 (16%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIKHLGQL-YH 133
LG G FG V I+ + + T +AVK L + + H ++E+K L + +H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 134 PNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQP------------LSWTI 180
N+V L+G C + L+V EF G+L +L R+ + P L+
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ + AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 150 LICYSFQVAKGMEFLASRKC--IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 207
Query: 241 TRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKP 300
+ APE + T +SDV+SFGV+L E+ S A P
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASP 250
Query: 301 YLQSK------RRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE 354
Y K RR+ + R Y+ +T + C EP RPT E+V+ L
Sbjct: 251 YPGVKIDEEFCRRLKEGTRMRAP-DYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLG 306
Query: 355 QIQDTN 360
+ N
Sbjct: 307 NLLQAN 312
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
D LG G FG V KG+ + + I N +L+ L L E + QL
Sbjct: 22 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALKDEL--LAEANVMQQLD 76
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
+P +V++IG C E + +LV E G L +L + + + +++ + G+
Sbjct: 77 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGM 130
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYA 250
YL +++ ++RD N+LL + AK+SDFGL+K +++ + G + +
Sbjct: 131 KYL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWY 187
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLS 278
APE + ++KSDV+SFGV++ E S
Sbjct: 188 APECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
D LG G FG V KG+ + + I N +L+ L L E + QL
Sbjct: 10 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALKDEL--LAEANVMQQLD 64
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
+P +V++IG C E + +LV E G L +L + + + +++ + G+
Sbjct: 65 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGM 118
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYA 250
YL +++ ++RD N+LL + AK+SDFGL+K +++ + G + +
Sbjct: 119 KYL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWY 175
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLS 278
APE + ++KSDV+SFGV++ E S
Sbjct: 176 APECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 126/306 (41%), Gaps = 49/306 (16%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIKHLGQL-YH 133
LG G FG V I+ + + T +AVK L + + H ++E+K L + +H
Sbjct: 72 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 127
Query: 134 PNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQP------------LSWTI 180
N+V L+G C + L+V EF G+L +L R+ + P L+
Sbjct: 128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ + AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 187 LICYSFQVAKGMEFLASRKC--IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 244
Query: 241 TRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKP 300
+ APE + T +SDV+SFGV+L E+ S A P
Sbjct: 245 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASP 287
Query: 301 YLQSK------RRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE 354
Y K RR+ + R Y+ +T + C EP RPT E+V+ L
Sbjct: 288 YPGVKIDEEFCRRLKEGTRMRAP-DYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLG 343
Query: 355 QIQDTN 360
+ N
Sbjct: 344 NLLQAN 349
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 109/238 (45%), Gaps = 26/238 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ-ESLQGHLEWLTEIKH 127
+F+ S+LGEG +G V T+ P TG ++A+K++ + L L EIK
Sbjct: 12 DFQLKSLLGEGAYGVVCSA-----THKP----TGEIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALG 187
L H N++ + D ++ + ++ L R ++ Q LS
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST--QMLSDDHIQYFIYQ 120
Query: 188 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---------DGPTGSQSH 238
+ + LH + VI+RD K SN+L++ N + K+ DFGLA+ PTG QS
Sbjct: 121 TLRAVKVLHG--SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ + T Y APE M T +++ DV+S G +L E+ RR I R R L+
Sbjct: 179 M-VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLL 234
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 126/306 (41%), Gaps = 49/306 (16%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIKHLGQL-YH 133
LG G FG V I+ + + T +AVK L + + H ++E+K L + +H
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 134 PNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQP------------LSWTI 180
N+V L+G C + L+V EF G+L +L R+ + P L+
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKEAPEDLYKDFLTLEH 151
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ + AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 152 LICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 209
Query: 241 TRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKP 300
+ APE + T +SDV+SFGV+L E+ S A P
Sbjct: 210 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASP 252
Query: 301 YLQSK------RRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE 354
Y K RR+ + R Y+ +T + C EP RPT E+V+ L
Sbjct: 253 YPGVKIDEEFCRRLKEGTRMRAP-DYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLG 308
Query: 355 QIQDTN 360
+ N
Sbjct: 309 NLLQAN 314
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 34/246 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLEWLT 123
N+R +G+G F V + H TG +AVK +LN SLQ +
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHIL------TGKEVAVKIIDKTQLNSSSLQ---KLFR 62
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E++ L HPN+VKL + LV E+ G + ++L G + R
Sbjct: 63 EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQI 122
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
V+ + Y H + +++RD K N+LLD + N K++DFG + + G++
Sbjct: 123 VS-----AVQYCH--QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA---F 172
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYL 302
G YAAPE + + + DV+S GV+L ++SG + P NL E + L
Sbjct: 173 CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVL 226
Query: 303 QSKRRI 308
+ K RI
Sbjct: 227 RGKYRI 232
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
D LG G FG V KG+ + + I N +L+ L L E + QL
Sbjct: 12 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALKDEL--LAEANVMQQLD 66
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
+P +V++IG C E + +LV E G L +L + + + +++ + G+
Sbjct: 67 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGM 120
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYA 250
YL +++ ++RD N+LL + AK+SDFGL+K +++ + G + +
Sbjct: 121 KYL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWY 177
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLS 278
APE + ++KSDV+SFGV++ E S
Sbjct: 178 APECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
D LG G FG V KG+ + + I N +L+ L L E + QL
Sbjct: 16 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALKDEL--LAEANVMQQLD 70
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
+P +V++IG C E + +LV E G L +L + + + +++ + G+
Sbjct: 71 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGM 124
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYA 250
YL +++ ++RD N+LL + AK+SDFGL+K +++ + G + +
Sbjct: 125 KYL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWY 181
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLS 278
APE + ++KSDV+SFGV++ E S
Sbjct: 182 APECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 127/303 (41%), Gaps = 63/303 (20%)
Query: 69 NFRPDSVLGEGGFGCVFKG--WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIK 126
+F+ ++G GGFG VFK ID TY R VK N+++ + E+K
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKR--------VKYNNEKAER-------EVK 56
Query: 127 HLGQLYHPNLVKLIG------YCLEDDHR----------LLVYEFMPKGSLENHLFRTGA 170
L +L H N+V G Y E + + EF KG+LE + +
Sbjct: 57 ALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 116
Query: 171 SYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 230
+ L + +++ KG+ Y+HS K+I RD K SNI L K+ DFGL
Sbjct: 117 ---EKLDKVLALELFEQITKGVDYIHS--KKLINRDLKPSNIFLVDTKQVKIGDFGLVTS 171
Query: 231 GPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSR 290
+ R GT Y +PE +++ + D+Y+ G++L E+L V D
Sbjct: 172 LKNDGKR---XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCD------ 219
Query: 291 EHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVV 350
E +K + D R +G S K L K LS +P+ RP E++
Sbjct: 220 --TAFETSKFF----------TDLR-DGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEIL 266
Query: 351 KAL 353
+ L
Sbjct: 267 RTL 269
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 31/231 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+GEG G V + +G ++AVK+++ Q E+ + H N
Sbjct: 159 IGEGSTGIVCIATVR---------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 209
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
+V++ L D +V EF+ G+L + + T + Q + V L + L+ L
Sbjct: 210 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVL 263
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
H+ VI+RD K+ +ILL + KLSDFG + ++GT + APE +
Sbjct: 264 HAQ--GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELI 319
Query: 256 ATGHLTAKSDVYSFGVVLLEMLSGR------------RVIDKNRPSREHNL 294
+ + D++S G++++EM+ G ++I N P R NL
Sbjct: 320 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNL 370
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 93/221 (42%), Gaps = 22/221 (9%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE--- 120
+ F +LG+G FG V TG A+K L +E + E
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVI---------LVKEKATGRYYAMKILKKEVIVAKDEVAH 197
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWT 179
LTE + L HP L L Y + RL V E+ G L HL R + S
Sbjct: 198 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRE-----RVFSED 251
Query: 180 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 239
L YLHS+K V+YRD K N++LD + + K++DFGL K+G +
Sbjct: 252 RARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK 310
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
+ GT Y APE + D + GVV+ EM+ GR
Sbjct: 311 T--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 24/221 (10%)
Query: 63 LKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN----QESLQG- 117
+K+ + + LGEG F V+K T ++A+K++ E+ G
Sbjct: 5 VKSRAKRYEKLDFLGEGQFATVYKA---------RDKNTNQIVAIKKIKLGHRSEAKDGI 55
Query: 118 HLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLS 177
+ L EIK L +L HPN++ L+ + LV++FM + LE + + + + P
Sbjct: 56 NRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEV-IIKDNSLVLTPSH 113
Query: 178 WTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQS 237
M + L +GL YLH + +++RD K +N+LLD N KL+DFGLAK GS +
Sbjct: 114 IKAYMLMTL---QGLEYLH--QHWILHRDLKPNNLLLDENGVLKLADFGLAKS--FGSPN 166
Query: 238 HVSTRVMGTYGYAAPEYMATGHLT-AKSDVYSFGVVLLEML 277
+ T Y APE + + D+++ G +L E+L
Sbjct: 167 RAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 93/223 (41%), Gaps = 22/223 (9%)
Query: 62 GLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW 121
G + F +LG+G FG V TG A+K L +E + E
Sbjct: 2 GSRVTMNEFEYLKLLGKGTFGKVI---------LVKEKATGRYYAMKILKKEVIVAKDEV 52
Query: 122 ---LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLS 177
LTE + L HP L L Y + RL V E+ G L HL R + S
Sbjct: 53 AHTLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRE-----RVFS 106
Query: 178 WTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQS 237
L YLHS+K V+YRD K N++LD + + K++DFGL K+G +
Sbjct: 107 EDRARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT 165
Query: 238 HVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
GT Y APE + D + GVV+ EM+ GR
Sbjct: 166 --MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 111/237 (46%), Gaps = 30/237 (12%)
Query: 53 SNIKSFSFNG----LKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK 108
+ + F NG +K NF VLG+G FG V R GT + AVK
Sbjct: 3 NTVSKFDNNGNRDRMKLTDFNFL--MVLGKGSFGKVM---------LSERKGTDELYAVK 51
Query: 109 RLNQESL--QGHLEW-LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENH 164
L ++ + +E + E + L P + + C + RL V E++ G L H
Sbjct: 52 ILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYH 111
Query: 165 LFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSD 224
+ + G + +P + ++A+G L +L S +IYRD K N++LD + K++D
Sbjct: 112 IQQVG-RFKEPHAVFYAAEIAIG----LFFLQS--KGIIYRDLKLDNVMLDSEGHIKIAD 164
Query: 225 FGLAKDGPTGSQSHVSTRVM-GTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
FG+ K+ V+T+ GT Y APE +A D ++FGV+L EML+G+
Sbjct: 165 FGMCKE---NIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 93/221 (42%), Gaps = 22/221 (9%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE--- 120
+ F +LG+G FG V TG A+K L +E + E
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKVI---------LVKEKATGRYYAMKILKKEVIVAKDEVAH 194
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWT 179
LTE + L HP L L Y + RL V E+ G L HL R + S
Sbjct: 195 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRE-----RVFSED 248
Query: 180 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 239
L YLHS+K V+YRD K N++LD + + K++DFGL K+G +
Sbjct: 249 RARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK 307
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
+ GT Y APE + D + GVV+ EM+ GR
Sbjct: 308 T--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 96/225 (42%), Gaps = 28/225 (12%)
Query: 63 LKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES--LQGHLE 120
+K +F +LG+G FG VF + T A+K L ++ + +E
Sbjct: 13 IKLKIEDFELHKMLGKGSFGKVFLAEFKK---------TNQFFAIKALKKDVVLMDDDVE 63
Query: 121 WLTEIKHLGQLY--HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSW 178
K + L HP L + ++ V E++ G L H IQ
Sbjct: 64 CTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYH--------IQSCHK 115
Query: 179 TIRMKVALGAAK---GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
+ AA+ GL +LHS ++YRD K NILLD + + K++DFG+ K+ G
Sbjct: 116 FDLSRATFYAAEIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD 173
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
+ GT Y APE + D +SFGV+L EML G+
Sbjct: 174 AK--TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 23/222 (10%)
Query: 64 KTATRN-FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ---GHL 119
+ T+N FR VLG+GGFG V + TG + A K+L ++ ++ G
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQVR---------ATGKMYACKKLEKKRIKKRKGEA 229
Query: 120 EWLTEIKHLGQLYHPNLVKLIGYCLE-DDHRLLVYEFMPKGSLENHLFRTGASYIQPLSW 178
L E K + + + V + Y E D LV M G L+ H++ G + P +
Sbjct: 230 MALNE-KQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGF-PEAR 287
Query: 179 TIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH 238
+ + GL LH + +++YRD K NILLD + + ++SD GLA P G
Sbjct: 288 AVFYAAEICC--GLEDLH--RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-- 341
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
+ RV GT GY APE + T D ++ G +L EM++G+
Sbjct: 342 IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 23/222 (10%)
Query: 64 KTATRN-FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ---GHL 119
+ T+N FR VLG+GGFG V + TG + A K+L ++ ++ G
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQVR---------ATGKMYACKKLEKKRIKKRKGEA 229
Query: 120 EWLTEIKHLGQLYHPNLVKLIGYCLE-DDHRLLVYEFMPKGSLENHLFRTGASYIQPLSW 178
L E K + + + V + Y E D LV M G L+ H++ G + P +
Sbjct: 230 MALNE-KQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGF-PEAR 287
Query: 179 TIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH 238
+ + GL LH + +++YRD K NILLD + + ++SD GLA P G
Sbjct: 288 AVFYAAEICC--GLEDLH--RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-- 341
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
+ RV GT GY APE + T D ++ G +L EM++G+
Sbjct: 342 IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 27/227 (11%)
Query: 61 NGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ---- 116
+GL A + + + +GEG +G VFK A G +A+KR+ ++ +
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFK--------ARDLKNGGRFVALKRVRVQTGEEGMP 55
Query: 117 -GHLEWLTEIKHLGQLYHPNLVKLIGYCL-----EDDHRLLVYEFMPKGSLENHLFRTGA 170
+ + ++HL HPN+V+L C + LV+E + + L +L +
Sbjct: 56 LSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPE 114
Query: 171 SYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 230
+ + TI+ + +GL +LHS + V++RD K NIL+ + KL+DFGLA+
Sbjct: 115 PGVP--TETIK-DMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLAR- 168
Query: 231 GPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEML 277
S T V+ T Y APE + D++S G + EM
Sbjct: 169 --IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
D LG G FG V KG+ + + I N +L+ L L E + QL
Sbjct: 16 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALKDEL--LAEANVMQQLD 70
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
+P +V++IG C E + +LV E G L +L + + + +++ + G+
Sbjct: 71 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGM 124
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-----DGPTGSQSHVSTRVMGTY 247
YL +++ ++RD N+LL + AK+SDFGL+K + +Q+H V
Sbjct: 125 KYL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPV---- 178
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ APE + ++KSDV+SFGV++ E S
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 94/218 (43%), Gaps = 28/218 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL--QGHLEWLTEIK 126
NF VLG+G FG V + E TG + AVK L ++ + +E K
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKE---------TGDLYAVKVLKKDVILQDDDVECTMTEK 74
Query: 127 HLGQLY--HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKV 184
+ L HP L +L D V EF+ G L H IQ +
Sbjct: 75 RILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFH--------IQKSRRFDEARA 126
Query: 185 ALGAAK---GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 241
AA+ L +LH DK +IYRD K N+LLD + KL+DFG+ K+G + +
Sbjct: 127 RFYAAEIISALMFLH-DKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TA 182
Query: 242 RVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GT Y APE + D ++ GV+L EML G
Sbjct: 183 TFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 94/214 (43%), Gaps = 37/214 (17%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWLTEIKHLGQLY 132
LG+G FG V Y + ++A+K L + L+ + E++ L
Sbjct: 20 LGKGKFGNV---------YLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTG-------ASYIQPLSWTIRMKVA 185
HPN+++L GY + L+ E+ P G++ L + A+YI L
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL--------- 121
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 245
A L+Y HS + VI+RD K N+LL N K++DFG + P+ + + G
Sbjct: 122 ---ANALSYCHSKR--VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC----G 172
Query: 246 TYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
T Y PE + K D++S GV+ E L G
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 109/211 (51%), Gaps = 23/211 (10%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH----LGQ 130
VLG+GG+G VF+ + + T A TG + A+K L + + + + K L +
Sbjct: 24 VLGKGGYGKVFQ--VRKVTGA----NTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEE 77
Query: 131 LYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAA 189
+ HP +V LI Y + +L L+ E++ G L L R G +++ + ++++
Sbjct: 78 VKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGI-FMEDTACFYLAEISMA-- 133
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
L +LH + +IYRD K NI+L+ + KL+DFGL K+ + V+ GT Y
Sbjct: 134 --LGHLH--QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE--SIHDGTVTHXFCGTIEY 187
Query: 250 AAPE-YMATGHLTAKSDVYSFGVVLLEMLSG 279
APE M +GH A D +S G ++ +ML+G
Sbjct: 188 MAPEILMRSGHNRA-VDWWSLGALMYDMLTG 217
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 110/212 (51%), Gaps = 25/212 (11%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH----LGQ 130
VLG+GG+G VF+ + + T A TG + A+K L + + + + K L +
Sbjct: 24 VLGKGGYGKVFQ--VRKVTGA----NTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEE 77
Query: 131 LYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAA 189
+ HP +V LI Y + +L L+ E++ G L L R G +++ + ++++
Sbjct: 78 VKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGI-FMEDTACFYLAEISMA-- 133
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGP-TGSQSHVSTRVMGTYG 248
L +LH + +IYRD K NI+L+ + KL+DFGL K+ G+ +H GT
Sbjct: 134 --LGHLH--QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT---FCGTIE 186
Query: 249 YAAPE-YMATGHLTAKSDVYSFGVVLLEMLSG 279
Y APE M +GH A D +S G ++ +ML+G
Sbjct: 187 YMAPEILMRSGHNRA-VDWWSLGALMYDMLTG 217
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 106/216 (49%), Gaps = 29/216 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ-----GHLEWLTEIKHLGQ 130
LG G FG K I EH TG +AVK LN++ ++ G ++ EI++L
Sbjct: 19 LGVGTFG---KVKIGEHQL------TGHKVAVKILNRQKIRSLDVVGKIK--REIQNLKL 67
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAK 190
HP+++KL +V E++ G L +++ + G ++ + + L A
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQQILSAVD 125
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
Y H + V++RD K N+LLD + NAK++DFGL+ G S G+ YA
Sbjct: 126 ---YCH--RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYA 177
Query: 251 APEYMATGHLTA--KSDVYSFGVVLLEMLSGRRVID 284
APE + +G L A + D++S GV+L +L G D
Sbjct: 178 APE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 27/227 (11%)
Query: 61 NGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ---- 116
+GL A + + + +GEG +G VFK A G +A+KR+ ++ +
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFK--------ARDLKNGGRFVALKRVRVQTGEEGMP 55
Query: 117 -GHLEWLTEIKHLGQLYHPNLVKLIGYCL-----EDDHRLLVYEFMPKGSLENHLFRTGA 170
+ + ++HL HPN+V+L C + LV+E + + L +L +
Sbjct: 56 LSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPE 114
Query: 171 SYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 230
+ + TI+ + +GL +LHS + V++RD K NIL+ + KL+DFGLA+
Sbjct: 115 PGVP--TETIK-DMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLAR- 168
Query: 231 GPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEML 277
S T V+ T Y APE + D++S G + EM
Sbjct: 169 --IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 27/227 (11%)
Query: 61 NGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ---- 116
+GL A + + + +GEG +G VFK A G +A+KR+ ++ +
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFK--------ARDLKNGGRFVALKRVRVQTGEEGMP 55
Query: 117 -GHLEWLTEIKHLGQLYHPNLVKLIGYCL-----EDDHRLLVYEFMPKGSLENHLFRTGA 170
+ + ++HL HPN+V+L C + LV+E + + L +L +
Sbjct: 56 LSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPE 114
Query: 171 SYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 230
+ + TI+ + +GL +LHS + V++RD K NIL+ + KL+DFGLA+
Sbjct: 115 PGVP--TETIK-DMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLAR- 168
Query: 231 GPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEML 277
S T V+ T Y APE + D++S G + EM
Sbjct: 169 --IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
D LG G FG V +G Y + + I V + E E + E + + QL
Sbjct: 15 DIELGCGNFGSVRQG-----VYRMRKKQIDVAIKVLKQGTEKADTE-EMMREAQIMHQLD 68
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRM--KVALGAAK 190
+P +V+LIG C + + +LV E G L H F G P+S + +V++G
Sbjct: 69 NPYIVRLIGVC-QAEALMLVMEMAGGGPL--HKFLVGKREEIPVSNVAELLHQVSMG--- 122
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--G 248
+ YL ++ ++RD N+LL + AK+SDFGL+K S+ + R G +
Sbjct: 123 -MKYL--EEKNFVHRDLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLK 178
Query: 249 YAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
+ APE + +++SDV+S+GV + E LS
Sbjct: 179 WYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLY 132
S +GEG +G V + + + + +A+K+++ Q + + L EIK L +
Sbjct: 49 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYI---QPLSWTIRMKVALGAA 189
H N++ + D R E M L HL + Q LS
Sbjct: 100 HENIIGI-----NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQIL 154
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG-PTGSQSHVSTRVMGTYG 248
+GL Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T
Sbjct: 155 RGLKYIHS--ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 249 YAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVI 283
Y APE M KS D++S G +L EMLS R +
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 92/221 (41%), Gaps = 22/221 (9%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-- 121
+ F +LG+G FG V TG A+K L +E + E
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVI---------LVKEKATGRYYAMKILKKEVIVAKDEVAH 55
Query: 122 -LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWT 179
LTE + L HP L L Y + RL V E+ G L HL R + S
Sbjct: 56 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRE-----RVFSED 109
Query: 180 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 239
L YLHS+K V+YRD K N++LD + + K++DFGL K+G +
Sbjct: 110 RARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT-- 166
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
GT Y APE + D + GVV+ EM+ GR
Sbjct: 167 MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 29 SYIGEGAYGMVCSAYDN---------VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
H N++ + + ++ + +E L++ + Q LS +GL
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGL 137
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG-PTGSQSHVSTRVMGTYGYAA 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y A
Sbjct: 138 KYIHS--ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 252 PEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVI 283
PE M KS D++S G +L EMLS R +
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 31/231 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+GEG G V + +G ++AVK+++ Q E+ + H N
Sbjct: 82 IGEGSTGIVCIATVR---------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 132
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
+V++ L D +V EF+ G+L + + T + Q + V L + L+ L
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVL 186
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
H+ VI+RD K+ +ILL + KLSDFG + ++GT + APE +
Sbjct: 187 HAQ--GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELI 242
Query: 256 ATGHLTAKSDVYSFGVVLLEMLSGR------------RVIDKNRPSREHNL 294
+ + D++S G++++EM+ G ++I N P R NL
Sbjct: 243 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNL 293
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 29 SYIGEGAYGMVCSAYDN---------VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
H N++ + + ++ + +E L++ + Q LS +GL
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGL 137
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG-PTGSQSHVSTRVMGTYGYAA 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y A
Sbjct: 138 KYIHS--ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 252 PEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVI 283
PE M KS D++S G +L EMLS R +
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 31/231 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+GEG G V A R +G ++AVK+++ Q E+ + H N
Sbjct: 39 IGEGSTGIV--------CIATVR-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 89
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
+V++ L D +V EF+ G+L + + T + Q + V L + L+ L
Sbjct: 90 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVL 143
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
H+ VI+RD K+ +ILL + KLSDFG + ++GT + APE +
Sbjct: 144 HAQ--GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELI 199
Query: 256 ATGHLTAKSDVYSFGVVLLEMLSGR------------RVIDKNRPSREHNL 294
+ + D++S G++++EM+ G ++I N P R NL
Sbjct: 200 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNL 250
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 31/231 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+GEG G V A R +G ++AVK+++ Q E+ + H N
Sbjct: 37 IGEGSTGIV--------CIATVR-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 87
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
+V++ L D +V EF+ G+L + + T + Q + V L + L+ L
Sbjct: 88 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVL 141
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
H+ VI+RD K+ +ILL + KLSDFG + ++GT + APE +
Sbjct: 142 HAQ--GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELI 197
Query: 256 ATGHLTAKSDVYSFGVVLLEMLSGR------------RVIDKNRPSREHNL 294
+ + D++S G++++EM+ G ++I N P R NL
Sbjct: 198 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNL 248
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 21/213 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL---QGHLEWLTEI 125
NFR + +G G F V++ A G+ +A+K++ L + + + EI
Sbjct: 33 NFRIEKKIGRGQFSEVYRA---------ACLLDGVPVALKKVQIFDLMDAKARADCIKEI 83
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMK 183
L QL HPN++K +ED+ +V E G L + F+ I P +
Sbjct: 84 DLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLI-PERTVWKYF 142
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
V L +A L ++HS +V++RD K +N+ + KL D GL + S++ + +
Sbjct: 143 VQLCSA--LEHMHS--RRVMHRDIKPANVFITATGVVKLGDLGLGRF--FSSKTTAAHSL 196
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEM 276
+GT Y +PE + KSD++S G +L EM
Sbjct: 197 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 229
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 92/221 (41%), Gaps = 22/221 (9%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-- 121
+ F +LG+G FG V TG A+K L +E + E
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVI---------LVKEKATGRYYAMKILKKEVIVAKDEVAH 56
Query: 122 -LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWT 179
LTE + L HP L L Y + RL V E+ G L HL R + S
Sbjct: 57 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRE-----RVFSED 110
Query: 180 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 239
L YLHS+K V+YRD K N++LD + + K++DFGL K+G +
Sbjct: 111 RARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT-- 167
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
GT Y APE + D + GVV+ EM+ GR
Sbjct: 168 MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 102/238 (42%), Gaps = 39/238 (16%)
Query: 75 VLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYH 133
V G FGCV+K ++E+ P +++S Q E + L + H
Sbjct: 31 VKARGRFGCVWKAQLLNEYVAVKIFPIQ---------DKQSWQNEYE----VYSLPGMKH 77
Query: 134 PNLVKLIGY----CLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAA 189
N+++ IG D L+ F KGSL + L +SW +A A
Sbjct: 78 ENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL------KANVVSWNELCHIAETMA 131
Query: 190 KGLAYLHSD--------KAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 241
+GLAYLH D K + +RD K+ N+LL N A ++DFGLA G + +
Sbjct: 132 RGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTH 191
Query: 242 RVMGTYGYAAPEYMATG-----HLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNL 294
+GT Y APE + + D+Y+ G+VL E+ S R + P E+ L
Sbjct: 192 GQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS--RCTAADGPVDEYML 247
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 93/223 (41%), Gaps = 27/223 (12%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-- 121
K +F +LG+G FG V TG A+K L +E + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 122 -LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWT 179
+TE + L HP L L Y + RL V E+ G L HL R +T
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERV-------FT 103
Query: 180 IRMKVALGA--AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQS 237
GA L YLHS V+YRD K N++LD + + K++DFGL K+G S
Sbjct: 104 EERARFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDG 159
Query: 238 HVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
GT Y APE + D + GVV+ EM+ GR
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 29 SYIGEGAYGMVCSAYDN---------VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
H N++ + + ++ + +E L++ + Q LS +GL
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGL 137
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG-PTGSQSHVSTRVMGTYGYAA 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y A
Sbjct: 138 KYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 252 PEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVI 283
PE M KS D++S G +L EMLS R +
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 95/223 (42%), Gaps = 27/223 (12%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-- 121
K +F +LG+G FG V TG A+K L +E + E
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAH 54
Query: 122 -LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWT 179
+TE + L HP L L Y + RL V E+ G L HL R +T
Sbjct: 55 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERV-------FT 106
Query: 180 IRMKVALGA--AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQS 237
GA L YLHS V+YRD K N++LD + + K++DFGL K+G + +
Sbjct: 107 EERARFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 164
Query: 238 HVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
+ GT Y APE + D + GVV+ EM+ GR
Sbjct: 165 MKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 33 SYIGEGAYGMVCSAYDN---------LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
H N++ + + ++ + +E L++ + Q LS +GL
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGL 141
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG-PTGSQSHVSTRVMGTYGYAA 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y A
Sbjct: 142 KYIHS--ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 252 PEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVI 283
PE M KS D++S G +L EMLS R +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 37 SYIGEGAYGMVCSAYDN---------VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 87
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
H N++ + + ++ + +E L++ + Q LS +GL
Sbjct: 88 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGL 145
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG-PTGSQSHVSTRVMGTYGYAA 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y A
Sbjct: 146 KYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 203
Query: 252 PEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVI 283
PE M KS D++S G +L EMLS R +
Sbjct: 204 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 29 SYIGEGAYGMVCSAYDN---------VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
H N++ + + ++ + +E L++ + Q LS +GL
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGL 137
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG-PTGSQSHVSTRVMGTYGYAA 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y A
Sbjct: 138 KYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 252 PEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVI 283
PE M KS D++S G +L EMLS R +
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 96/225 (42%), Gaps = 28/225 (12%)
Query: 63 LKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES--LQGHLE 120
+K +F +LG+G FG VF + T A+K L ++ + +E
Sbjct: 12 IKLKIEDFILHKMLGKGSFGKVFLAEFKK---------TNQFFAIKALKKDVVLMDDDVE 62
Query: 121 WLTEIKHLGQLY--HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSW 178
K + L HP L + ++ V E++ G L H IQ
Sbjct: 63 CTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYH--------IQSCHK 114
Query: 179 TIRMKVALGAAK---GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
+ AA+ GL +LHS ++YRD K NILLD + + K++DFG+ K+ G
Sbjct: 115 FDLSRATFYAAEIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD 172
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
+ GT Y APE + D +SFGV+L EML G+
Sbjct: 173 AK--TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 93/223 (41%), Gaps = 27/223 (12%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-- 121
K +F +LG+G FG V TG A+K L +E + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 122 -LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWT 179
+TE + L HP L L Y + RL V E+ G L HL R +T
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERV-------FT 103
Query: 180 IRMKVALGA--AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQS 237
GA L YLHS V+YRD K N++LD + + K++DFGL K+G S
Sbjct: 104 EERARFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDG 159
Query: 238 HVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
GT Y APE + D + GVV+ EM+ GR
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 31 SYIGEGAYGMVCSAYDN---------VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 81
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
H N++ + + ++ + +E L++ + Q LS +GL
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGL 139
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG-PTGSQSHVSTRVMGTYGYAA 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y A
Sbjct: 140 KYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 252 PEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVI 283
PE M KS D++S G +L EMLS R +
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 33 SYIGEGAYGMVCSAYDN---------LNKVRVAIKKISPFEHQTYXQRTLREIKILLRFR 83
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
H N++ + + ++ + +E L++ + Q LS +GL
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGL 141
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG-PTGSQSHVSTRVMGTYGYAA 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y A
Sbjct: 142 KYIHS--ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 252 PEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVI 283
PE M KS D++S G +L EMLS R +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 93/223 (41%), Gaps = 27/223 (12%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-- 121
K +F +LG+G FG V TG A+K L +E + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 122 -LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWT 179
+TE + L HP L L Y + RL V E+ G L HL R +T
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERV-------FT 103
Query: 180 IRMKVALGA--AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQS 237
GA L YLHS V+YRD K N++LD + + K++DFGL K+G S
Sbjct: 104 EERARFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDG 159
Query: 238 HVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
GT Y APE + D + GVV+ EM+ GR
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 29 SYIGEGAYGMVCSAYDN---------VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
H N++ + + ++ + +E L++ + Q LS +GL
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGL 137
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG-PTGSQSHVSTRVMGTYGYAA 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y A
Sbjct: 138 KYIHS--ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 252 PEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVI 283
PE M KS D++S G +L EMLS R +
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 31/231 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+GEG G V A R +G ++AVK+++ Q E+ + H N
Sbjct: 32 IGEGSTGIV--------CIATVR-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 82
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
+V++ L D +V EF+ G+L + + T + Q + V L + L+ L
Sbjct: 83 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVL 136
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
H+ VI+RD K+ +ILL + KLSDFG + ++GT + APE +
Sbjct: 137 HAQ--GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELI 192
Query: 256 ATGHLTAKSDVYSFGVVLLEMLSGR------------RVIDKNRPSREHNL 294
+ + D++S G++++EM+ G ++I N P R NL
Sbjct: 193 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNL 243
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 93/223 (41%), Gaps = 27/223 (12%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-- 121
K +F +LG+G FG V TG A+K L +E + E
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAH 56
Query: 122 -LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWT 179
+TE + L HP L L Y + RL V E+ G L HL R +T
Sbjct: 57 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERV-------FT 108
Query: 180 IRMKVALGA--AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQS 237
GA L YLHS V+YRD K N++LD + + K++DFGL K+G S
Sbjct: 109 EERARFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDG 164
Query: 238 HVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
GT Y APE + D + GVV+ EM+ GR
Sbjct: 165 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 31/231 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+GEG G V A R +G ++AVK+++ Q E+ + H N
Sbjct: 28 IGEGSTGIV--------CIATVR-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 78
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
+V++ L D +V EF+ G+L + + T + Q + V L + L+ L
Sbjct: 79 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVL 132
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 255
H+ VI+RD K+ +ILL + KLSDFG + ++GT + APE +
Sbjct: 133 HAQ--GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELI 188
Query: 256 ATGHLTAKSDVYSFGVVLLEMLSGR------------RVIDKNRPSREHNL 294
+ + D++S G++++EM+ G ++I N P R NL
Sbjct: 189 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNL 239
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 95/223 (42%), Gaps = 27/223 (12%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-- 121
K +F +LG+G FG V TG A+K L +E + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 122 -LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWT 179
+TE + L HP L L Y + RL V E+ G L HL R +T
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERV-------FT 103
Query: 180 IRMKVALGA--AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQS 237
GA L YLHS V+YRD K N++LD + + K++DFGL K+G + +
Sbjct: 104 EERARFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 161
Query: 238 HVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
+ GT Y APE + D + GVV+ EM+ GR
Sbjct: 162 MKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLY 132
S +GEG +G V + + + + +A+K+++ Q + + L EIK L +
Sbjct: 49 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
H N++ + + ++ + +E L++ + Q LS +GL
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGL 157
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG-PTGSQSHVSTRVMGTYGYAA 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y A
Sbjct: 158 KYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 215
Query: 252 PEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVI 283
PE M KS D++S G +L EMLS R +
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 95/223 (42%), Gaps = 27/223 (12%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-- 121
K +F +LG+G FG V TG A+K L +E + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 122 -LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWT 179
+TE + L HP L L Y + RL V E+ G L HL R +T
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERV-------FT 103
Query: 180 IRMKVALGA--AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQS 237
GA L YLHS V+YRD K N++LD + + K++DFGL K+G + +
Sbjct: 104 EERARFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 161
Query: 238 HVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
+ GT Y APE + D + GVV+ EM+ GR
Sbjct: 162 MKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 34 SYIGEGAYGMVCSAYDN---------LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 84
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
H N++ + + ++ + +E L++ + Q LS +GL
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGL 142
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG-PTGSQSHVSTRVMGTYGYAA 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y A
Sbjct: 143 KYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 200
Query: 252 PEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVI 283
PE M KS D++S G +L EMLS R +
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 35 SYIGEGAYGMVCSAYDN---------LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 85
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
H N++ + + ++ + +E L++ + Q LS +GL
Sbjct: 86 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGL 143
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG-PTGSQSHVSTRVMGTYGYAA 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y A
Sbjct: 144 KYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 201
Query: 252 PEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVI 283
PE M KS D++S G +L EMLS R +
Sbjct: 202 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 26 SYIGEGAYGMVCSAYDN---------LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 76
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
H N++ + + ++ + +E L++ + Q LS +GL
Sbjct: 77 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGL 134
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG-PTGSQSHVSTRVMGTYGYAA 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y A
Sbjct: 135 KYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 192
Query: 252 PEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVI 283
PE M KS D++S G +L EMLS R +
Sbjct: 193 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 33 SYIGEGAYGMVCSAYDN---------LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
H N++ + + ++ + +E L++ + Q LS +GL
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGL 141
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG-PTGSQSHVSTRVMGTYGYAA 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y A
Sbjct: 142 KYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 252 PEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVI 283
PE M KS D++S G +L EMLS R +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 27 SYIGEGAYGMVCSAYDN---------LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 77
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
H N++ + + ++ + +E L++ + Q LS +GL
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGL 135
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG-PTGSQSHVSTRVMGTYGYAA 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y A
Sbjct: 136 KYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 252 PEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVI 283
PE M KS D++S G +L EMLS R +
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 27 SYIGEGAYGMVCSAYDN---------LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 77
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
H N++ + + ++ + +E L++ + Q LS +GL
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGL 135
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG-PTGSQSHVSTRVMGTYGYAA 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y A
Sbjct: 136 KYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 252 PEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVI 283
PE M KS D++S G +L EMLS R +
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 106/216 (49%), Gaps = 29/216 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ-----GHLEWLTEIKHLGQ 130
LG G FG K I EH TG +AVK LN++ ++ G ++ EI++L
Sbjct: 19 LGVGTFG---KVKIGEHQL------TGHKVAVKILNRQKIRSLDVVGKIK--REIQNLKL 67
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAK 190
HP+++KL +V E++ G L +++ + G ++ + + L A
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQQILSAVD 125
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
Y H + V++RD K N+LLD + NAK++DFGL+ G S G+ YA
Sbjct: 126 ---YCH--RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYA 177
Query: 251 APEYMATGHLTA--KSDVYSFGVVLLEMLSGRRVID 284
APE + +G L A + D++S GV+L +L G D
Sbjct: 178 APE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 130/300 (43%), Gaps = 41/300 (13%)
Query: 101 TGMVIAVKRLNQESLQGHLEWL-TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKG 159
TG ++A+K +++ +L L + TEI+ L L H ++ +L + +V E+ P G
Sbjct: 34 TGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGG 93
Query: 160 SLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN 219
L +++ + R V+ +AY+HS +RD K N+L D +
Sbjct: 94 ELFDYIISQDRLSEEETRVVFRQIVS-----AVAYVHSQGYA--HRDLKPENLLFDEYHK 146
Query: 220 AKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM-ATGHLTAKSDVYSFGVVLLEMLS 278
KL DFGL P G++ + G+ YAAPE + +L +++DV+S G++L ++
Sbjct: 147 LKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMC 205
Query: 279 GRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAAL--KTAVLAIKCL 336
G D + + + + G+Y + L + +L + L
Sbjct: 206 GFLPFDDD--------------------NVMALYKKIMRGKYDVPKWLSPSSILLLQQML 245
Query: 337 SNEPKFRPTMDEVVKALEQIQDTNDAGVSRDESLQNSDRSTYKRKGLNENGQGKASVHHR 396
+PK R +M ++ N + +D + +S L+++ + SVHHR
Sbjct: 246 QVDPKKRISMKNLL---------NHPWIMQDYNYPVEWQSKNPFIHLDDDCVTELSVHHR 296
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 40/221 (18%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWLTEIKHLGQLY 132
LGEG FG K + H T +A+K ++++ L+ H+ EI +L L
Sbjct: 17 LGEGSFG---KVKLATHY------KTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR 67
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRT-------GASYIQPLSWTIRMKVA 185
HP+++KL ++V E+ G L +++ G + Q + I
Sbjct: 68 HPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIE---- 122
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 245
Y H + K+++RD K N+LLD N N K++DFGL+ G+ S G
Sbjct: 123 --------YCH--RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---G 169
Query: 246 TYGYAAPEYMATGHLTA--KSDVYSFGVVLLEMLSGRRVID 284
+ YAAPE + G L A + DV+S G+VL ML GR D
Sbjct: 170 SPNYAAPE-VINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLY 132
S +GEG +G V + + + + +A+K+++ Q + + L EIK L +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYI---QPLSWTIRMKVALGAA 189
H N++ + D R E M + L T + Q LS
Sbjct: 84 HENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQIL 138
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG-PTGSQSHVSTRVMGTYG 248
+GL Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T
Sbjct: 139 RGLKYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 249 YAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVI 283
Y APE M KS D++S G +L EMLS R +
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L
Sbjct: 31 SYIGEGAYGMVCSAYDN---------VNKVRVAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
H N++ + + ++ + +E L++ + Q LS +GL
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGL 139
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG-PTGSQSHVSTRVMGTYGYAA 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y A
Sbjct: 140 KYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 252 PEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVI 283
PE M KS D++S G +L EMLS R +
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLY 132
S +GEG +G V + + + + +A+K+++ Q + + L EIK L
Sbjct: 31 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
H N++ + + ++ + +E L++ + Q LS +GL
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGL 139
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG-PTGSQSHVSTRVMGTYGYAA 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y A
Sbjct: 140 KYIHS--ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 252 PEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVI 283
PE M KS D++S G +L EMLS R +
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLY 132
S +GEG +G V + + + +A+++++ Q + + L EIK L +
Sbjct: 33 SYIGEGAYGMVCSAYDN---------LNKVRVAIRKISPFEHQTYCQRTLREIKILLRFR 83
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
H N++ + + ++ + +E L++ + Q LS +GL
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGL 141
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG-PTGSQSHVSTRVMGTYGYAA 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y A
Sbjct: 142 KYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 252 PEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVI 283
PE M KS D++S G +L EMLS R +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 19/221 (8%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG+G FG V+ ++ + A V+ +L +E ++ L EI+ L HPN
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMAL----KVLFKSQLEKEGVEHQLRREIEIQ--SHLRHPN 76
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
++++ Y + L+ EF P+G L L + G + + S T ++ A L Y
Sbjct: 77 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEEL----ADALHYC 131
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM-GTYGYAAPEY 254
H + KVI+RD K N+L+ K++DFG + P+ + R M GT Y PE
Sbjct: 132 H--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEM 184
Query: 255 MATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ K D++ GV+ E L G D + H I
Sbjct: 185 IEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI 225
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 19/221 (8%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG+G FG V+ ++ + A V+ +L +E ++ L EI+ L HPN
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMAL----KVLFKSQLEKEGVEHQLRREIEIQ--SHLRHPN 75
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
++++ Y + L+ EF P+G L L + G + + S T ++ A L Y
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEEL----ADALHYC 130
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM-GTYGYAAPEY 254
H + KVI+RD K N+L+ K++DFG + P+ + R M GT Y PE
Sbjct: 131 H--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEM 183
Query: 255 MATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ K D++ GV+ E L G D + H I
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI 224
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 19/221 (8%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG+G FG V+ ++ + A V+ +L +E ++ L EI+ L HPN
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMAL----KVLFKSQLEKEGVEHQLRREIEIQ--SHLRHPN 75
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
++++ Y + L+ EF P+G L L + G + + S T ++ A L Y
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEEL----ADALHYC 130
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM-GTYGYAAPEY 254
H + KVI+RD K N+L+ K++DFG + P+ + R M GT Y PE
Sbjct: 131 H--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEM 183
Query: 255 MATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ K D++ GV+ E L G D + H I
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI 224
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 119/272 (43%), Gaps = 42/272 (15%)
Query: 54 NIKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN-- 111
++ + L+ F ++G G +G V+KG H TG + A+K ++
Sbjct: 10 SLDEIDLSALRDPAGIFELVELVGNGTYGQVYKG---RHV------KTGQLAAIKVMDVT 60
Query: 112 ---QESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLE------DDHRLLVYEFMPKGSLE 162
+E ++ + L + H H N+ G ++ DD LV EF GS+
Sbjct: 61 GDEEEEIKQEINMLKKYSH-----HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVT 115
Query: 163 NHLFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKL 222
+ + T + ++ W + +GL++LH + KVI+RD K N+LL N KL
Sbjct: 116 DLIKNTKGNTLKE-EWI--AYICREILRGLSHLH--QHKVIHRDIKGQNVLLTENAEVKL 170
Query: 223 SDFGLAK--DGPTGSQSHVSTRVMGTYGYAAPEYMATGH-----LTAKSDVYSFGVVLLE 275
DFG++ D G ++ +GT + APE +A KSD++S G+ +E
Sbjct: 171 VDFGVSAQLDRTVGRRN----TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIE 226
Query: 276 MLSGRRVIDKNRPSREHNLIEW-AKPYLQSKR 306
M G + P R LI P L+SK+
Sbjct: 227 MAEGAPPLCDMHPMRALFLIPRNPAPRLKSKK 258
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 27/233 (11%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL---QGHLEWLTEI 125
+F ++G GGFG V Y + TG + A+K L+++ + QG L E
Sbjct: 190 DFSVHRIIGRGGFGEV---------YGCRKADTGKMYAMKCLDKKRIKMKQGETLALNER 240
Query: 126 KHLGQLYHPN--LVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRM 182
L + + + + Y +L + + M G L HL + G + +
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF---- 296
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
A GL ++H+ V+YRD K +NILLD + + ++SD GLA D + + H S
Sbjct: 297 -YAAEIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPHAS-- 350
Query: 243 VMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNL 294
+GT+GY APE + G + +D +S G +L ++L G +++ +H +
Sbjct: 351 -VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 27/233 (11%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL---QGHLEWLTEI 125
+F ++G GGFG V Y + TG + A+K L+++ + QG L E
Sbjct: 189 DFSVHRIIGRGGFGEV---------YGCRKADTGKMYAMKCLDKKRIKMKQGETLALNER 239
Query: 126 KHLGQLYHPN--LVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRM 182
L + + + + Y +L + + M G L HL + G + +
Sbjct: 240 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF---- 295
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
A GL ++H+ V+YRD K +NILLD + + ++SD GLA D + + H S
Sbjct: 296 -YAAEIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPHAS-- 349
Query: 243 VMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNL 294
+GT+GY APE + G + +D +S G +L ++L G +++ +H +
Sbjct: 350 -VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 401
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 115/250 (46%), Gaps = 28/250 (11%)
Query: 101 TGMVIAVKRLNQESLQGH--LEWLTEIKHLGQLY--HPNLVKLIGYCLEDDHRLL-VYEF 155
T + A+K + +E + ++W+ KH+ + HP LV L C + + RL V E+
Sbjct: 44 TDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS-CFQTESRLFFVIEY 102
Query: 156 MPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLD 215
+ G L H+ R + L + + L YLH + +IYRD K N+LLD
Sbjct: 103 VNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLH--ERGIIYRDLKLDNVLLD 155
Query: 216 LNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLE 275
+ KL+D+G+ K+G + ++ GT Y APE + D ++ GV++ E
Sbjct: 156 SEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFE 213
Query: 276 MLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDARIEGQYSL--GAALKTAVLAI 333
M++GR D S P ++ +FQV+ +E Q + ++K A +
Sbjct: 214 MMAGRSPFDIVGSS--------DNPDQNTEDYLFQVI---LEKQIRIPRSMSVKAASVLK 262
Query: 334 KCLSNEPKFR 343
L+ +PK R
Sbjct: 263 SFLNKDPKER 272
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 32/219 (14%)
Query: 70 FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE---WLTEIK 126
++ VLG+G FG V TG AVK +++ ++ + L E++
Sbjct: 51 YKGQRVLGKGSFGEVI---------LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 101
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
L QL HPN++KL + + + LV E G L + + + S ++
Sbjct: 102 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR-----KRFSEVDAARIIR 156
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLD---LNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
G+ Y+H K K+++RD K N+LL+ + N ++ DFGL+ + S ++
Sbjct: 157 QVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS------THFEASKKM 208
Query: 244 ---MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+GT Y APE + G K DV+S GV+L +LSG
Sbjct: 209 KDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 246
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 86/180 (47%), Gaps = 9/180 (5%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAK 190
L H N+VK G+ E + + L E+ G L + R P R L A
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMA-- 115
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y
Sbjct: 116 GVVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 251 APEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVIDKNRPS-REHNLIEWAKPYLQSKRRI 308
APE + A+ DV+S G+VL ML+G D+ S +E++ + K YL ++I
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 32/219 (14%)
Query: 70 FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE---WLTEIK 126
++ VLG+G FG V TG AVK +++ ++ + L E++
Sbjct: 52 YKGQRVLGKGSFGEVI---------LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 102
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
L QL HPN++KL + + + LV E G L + + + S ++
Sbjct: 103 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR-----KRFSEVDAARIIR 157
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLD---LNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
G+ Y+H K K+++RD K N+LL+ + N ++ DFGL+ + S ++
Sbjct: 158 QVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS------THFEASKKM 209
Query: 244 ---MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+GT Y APE + G K DV+S GV+L +LSG
Sbjct: 210 KDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 247
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 115/250 (46%), Gaps = 28/250 (11%)
Query: 101 TGMVIAVKRLNQESLQGH--LEWLTEIKHLGQLY--HPNLVKLIGYCLEDDHRLL-VYEF 155
T + A+K + +E + ++W+ KH+ + HP LV L C + + RL V E+
Sbjct: 33 TDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS-CFQTESRLFFVIEY 91
Query: 156 MPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLD 215
+ G L H+ R + L + + L YLH + +IYRD K N+LLD
Sbjct: 92 VNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLH--ERGIIYRDLKLDNVLLD 144
Query: 216 LNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLE 275
+ KL+D+G+ K+G + ++ GT Y APE + D ++ GV++ E
Sbjct: 145 SEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFE 202
Query: 276 MLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAAL--KTAVLAI 333
M++GR D S P ++ +FQV+ +E Q + +L K A +
Sbjct: 203 MMAGRSPFDIVGSS--------DNPDQNTEDYLFQVI---LEKQIRIPRSLSVKAASVLK 251
Query: 334 KCLSNEPKFR 343
L+ +PK R
Sbjct: 252 SFLNKDPKER 261
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLYHP 134
+GEG +G V + +H +A+K+++ Q + + L EI+ L + H
Sbjct: 51 IGEGAYGMVSSAY--DHV-------RKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHE 101
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAY 194
N++ + + ++ + +E L++ S Q LS +GL Y
Sbjct: 102 NVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKS--QQLSNDHICYFLYQILRGLKY 159
Query: 195 LHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG-PTGSQSHVSTRVMGTYGYAAPE 253
+HS A V++RD K SN+L++ + K+ DFGLA+ P + T + T Y APE
Sbjct: 160 IHS--ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPE 217
Query: 254 YMATGHLTAKS-DVYSFGVVLLEMLSGRRVI 283
M KS D++S G +L EMLS R +
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 70 FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE---WLTEIK 126
++ VLG+G FG V TG AVK +++ ++ + L E++
Sbjct: 28 YKGQRVLGKGSFGEVI---------LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 78
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
L QL HPN++KL + + + LV E G L + + + S ++
Sbjct: 79 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR-----KRFSEVDAARIIR 133
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLD---LNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
G+ Y+H K K+++RD K N+LL+ + N ++ DFGL+ +
Sbjct: 134 QVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK--- 188
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+GT Y APE + G K DV+S GV+L +LSG
Sbjct: 189 IGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 27/233 (11%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL---QGHLEWLTEI 125
+F ++G GGFG V Y + TG + A+K L+++ + QG L E
Sbjct: 190 DFSVHRIIGRGGFGEV---------YGCRKADTGKMYAMKCLDKKRIKMKQGETLALNER 240
Query: 126 KHLGQLYHPN--LVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRM 182
L + + + + Y +L + + M G L HL + G + +
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF---- 296
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
A GL ++H+ V+YRD K +NILLD + + ++SD GLA D + + H S
Sbjct: 297 -YAAEIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPHAS-- 350
Query: 243 VMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNL 294
+GT+GY APE + G + +D +S G +L ++L G +++ +H +
Sbjct: 351 -VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 27/233 (11%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL---QGHLEWLTEI 125
+F ++G GGFG V Y + TG + A+K L+++ + QG L E
Sbjct: 190 DFSVHRIIGRGGFGEV---------YGCRKADTGKMYAMKCLDKKRIKMKQGETLALNER 240
Query: 126 KHLGQLYHPN--LVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRM 182
L + + + + Y +L + + M G L HL + G + +
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF---- 296
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
A GL ++H+ V+YRD K +NILLD + + ++SD GLA D + + H S
Sbjct: 297 -YAAEIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPHAS-- 350
Query: 243 VMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNL 294
+GT+GY APE + G + +D +S G +L ++L G +++ +H +
Sbjct: 351 -VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 86/180 (47%), Gaps = 9/180 (5%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAK 190
L H N+VK G+ E + + L E+ G L + R P R L A
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMA-- 116
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y
Sbjct: 117 GVVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 251 APEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVIDKNRPS-REHNLIEWAKPYLQSKRRI 308
APE + A+ DV+S G+VL ML+G D+ S +E++ + K YL ++I
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 234
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 108/230 (46%), Gaps = 17/230 (7%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
D LG G FG V +G Y + + I V + E E + E + + QL
Sbjct: 341 DIELGCGNFGSVRQG-----VYRMRKKQIDVAIKVLKQGTEKADTE-EMMREAQIMHQLD 394
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
+P +V+LIG C + + +LV E G L H F G P+S + + + G+
Sbjct: 395 NPYIVRLIGVC-QAEALMLVMEMAGGGPL--HKFLVGKREEIPVSNVAELLHQV--SMGM 449
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYA 250
YL ++ ++R+ N+LL + AK+SDFGL+K S+ + R G + +
Sbjct: 450 KYL--EEKNFVHRNLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWY 506
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDKNRPSREHNLIEWAK 299
APE + +++SDV+S+GV + E LS G++ K + IE K
Sbjct: 507 APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK 556
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 115/250 (46%), Gaps = 28/250 (11%)
Query: 101 TGMVIAVKRLNQESLQGH--LEWLTEIKHLGQLY--HPNLVKLIGYCLEDDHRLL-VYEF 155
T + A+K + +E + ++W+ KH+ + HP LV L C + + RL V E+
Sbjct: 29 TDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS-CFQTESRLFFVIEY 87
Query: 156 MPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLD 215
+ G L H+ R + L + + L YLH + +IYRD K N+LLD
Sbjct: 88 VNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLH--ERGIIYRDLKLDNVLLD 140
Query: 216 LNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLE 275
+ KL+D+G+ K+G + ++ GT Y APE + D ++ GV++ E
Sbjct: 141 SEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFE 198
Query: 276 MLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAAL--KTAVLAI 333
M++GR D S P ++ +FQV+ +E Q + +L K A +
Sbjct: 199 MMAGRSPFDIVGSS--------DNPDQNTEDYLFQVI---LEKQIRIPRSLSVKAASVLK 247
Query: 334 KCLSNEPKFR 343
L+ +PK R
Sbjct: 248 SFLNKDPKER 257
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 31/216 (14%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ---GHLEWLTEIKHLGQL 131
VLG GGFG VF A TG + A K+LN++ L+ G+ + E K L ++
Sbjct: 192 VLGRGGFGEVF---------ACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 132 YHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRT---GASYIQPLSWTIRMKVALG 187
H + + Y E L LV M G + H++ + +P + ++
Sbjct: 243 -HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV-- 299
Query: 188 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA---KDGPTGSQSHVSTRVM 244
GL +LH + +IYRD K N+LLD + N ++SD GLA K G T ++ +
Sbjct: 300 --SGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA----- 350
Query: 245 GTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
GT G+ APE + D ++ GV L EM++ R
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 86/180 (47%), Gaps = 9/180 (5%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAK 190
L H N+VK G+ E + + L E+ G L + R P R L A
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMA-- 116
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y
Sbjct: 117 GVVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 251 APEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVIDKNRPS-REHNLIEWAKPYLQSKRRI 308
APE + A+ DV+S G+VL ML+G D+ S +E++ + K YL ++I
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 234
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 86/180 (47%), Gaps = 9/180 (5%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAK 190
L H N+VK G+ E + + L E+ G L + R P R L A
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMA-- 116
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y
Sbjct: 117 GVVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 251 APEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVIDKNRPS-REHNLIEWAKPYLQSKRRI 308
APE + A+ DV+S G+VL ML+G D+ S +E++ + K YL ++I
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 234
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 86/180 (47%), Gaps = 9/180 (5%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAK 190
L H N+VK G+ E + + L E+ G L + R P R L A
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMA-- 116
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y
Sbjct: 117 GVVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 251 APEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVIDKNRPS-REHNLIEWAKPYLQSKRRI 308
APE + A+ DV+S G+VL ML+G D+ S +E++ + K YL ++I
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 234
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 33 SYIGEGAYGMVCSAYDN---------LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
H N++ + + ++ + +E L++ + Q LS +GL
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGL 141
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG-PTGSQSHVSTRVMGTYGYAA 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + + T Y A
Sbjct: 142 KYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRA 199
Query: 252 PEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVI 283
PE M KS D++S G +L EMLS R +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 34 SYIGEGAYGMVCSAYDN---------LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 84
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
H N++ + + ++ + +E L++ + Q LS +GL
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGL 142
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG-PTGSQSHVSTRVMGTYGYAA 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + + T Y A
Sbjct: 143 KYIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRA 200
Query: 252 PEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVI 283
PE M KS D++S G +L EMLS R +
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 86/180 (47%), Gaps = 9/180 (5%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAK 190
L H N+VK G+ E + + L E+ G L + R P R L A
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMA-- 115
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y
Sbjct: 116 GVVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 251 APEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVIDKNRPS-REHNLIEWAKPYLQSKRRI 308
APE + A+ DV+S G+VL ML+G D+ S +E++ + K YL ++I
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 31/216 (14%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ---GHLEWLTEIKHLGQL 131
VLG GGFG VF A TG + A K+LN++ L+ G+ + E K L ++
Sbjct: 192 VLGRGGFGEVF---------ACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 132 YHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRT---GASYIQPLSWTIRMKVALG 187
H + + Y E L LV M G + H++ + +P + ++
Sbjct: 243 -HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV-- 299
Query: 188 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA---KDGPTGSQSHVSTRVM 244
GL +LH + +IYRD K N+LLD + N ++SD GLA K G T ++ +
Sbjct: 300 --SGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA----- 350
Query: 245 GTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
GT G+ APE + D ++ GV L EM++ R
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 31/216 (14%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ---GHLEWLTEIKHLGQL 131
VLG GGFG VF A TG + A K+LN++ L+ G+ + E K L ++
Sbjct: 192 VLGRGGFGEVF---------ACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 132 YHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRT---GASYIQPLSWTIRMKVALG 187
H + + Y E L LV M G + H++ + +P + ++
Sbjct: 243 -HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV-- 299
Query: 188 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA---KDGPTGSQSHVSTRVM 244
GL +LH + +IYRD K N+LLD + N ++SD GLA K G T ++ +
Sbjct: 300 --SGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA----- 350
Query: 245 GTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
GT G+ APE + D ++ GV L EM++ R
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 102/238 (42%), Gaps = 48/238 (20%)
Query: 69 NFRPDSVLGEGGFGCVFKG--WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIK 126
+F +VLG+G FG V K +D YA I R +E L L+E+
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYA---------IKKIRHTEEKLST---ILSEVM 54
Query: 127 HLGQLYHPNLVKLIGYCLEDDH-------------RLLVYEFMPKGSLENHLFRTGASYI 173
L L H +V+ LE + + E+ G+L + + +
Sbjct: 55 LLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQ 114
Query: 174 QPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD--- 230
+ W + ++ + L+Y+HS +I+RD K NI +D + N K+ DFGLAK+
Sbjct: 115 RDEYWRLFRQIL----EALSYIHSQG--IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHR 168
Query: 231 ----------GPTGSQSHVSTRVMGTYGYAAPEYM-ATGHLTAKSDVYSFGVVLLEML 277
GS ++ T +GT Y A E + TGH K D+YS G++ EM+
Sbjct: 169 SLDILKLDSQNLPGSSDNL-TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 88/187 (47%), Gaps = 9/187 (4%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L H N+VK G+ E + + L E+ G L + R P R
Sbjct: 55 EICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFF 111
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
L A G+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++
Sbjct: 112 HQLMA--GVVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 244 MGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVIDKNRPS-REHNLIEWAKPY 301
GT Y APE + A+ DV+S G+VL ML+G D+ S +E++ + K Y
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 227
Query: 302 LQSKRRI 308
L ++I
Sbjct: 228 LNPWKKI 234
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 88/187 (47%), Gaps = 9/187 (4%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L H N+VK G+ E + + L E+ G L + R P R
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFF 110
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
L A G+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++
Sbjct: 111 HQLMA--GVVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 244 MGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVIDKNRPS-REHNLIEWAKPY 301
GT Y APE + A+ DV+S G+VL ML+G D+ S +E++ + K Y
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 226
Query: 302 LQSKRRI 308
L ++I
Sbjct: 227 LNPWKKI 233
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 26/230 (11%)
Query: 119 LEWLTEIKHLGQLY--HPNLVKLIGYCLEDDHRLL-VYEFMPKGSLENHLFRTGASYIQP 175
++W+ KH+ + HP LV L C + + RL V E++ G L H+ R +
Sbjct: 96 IDWVQTEKHVFEQASNHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQ-----RK 149
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
L + + L YLH + +IYRD K N+LLD + KL+D+G+ K+G
Sbjct: 150 LPEEHARFYSAEISLALNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 207
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
+ ++ GT Y APE + D ++ GV++ EM++GR D S
Sbjct: 208 DT--TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSS------ 259
Query: 296 EWAKPYLQSKRRIFQVMDARIEGQYSLGAAL--KTAVLAIKCLSNEPKFR 343
P ++ +FQV+ +E Q + +L K A + L+ +PK R
Sbjct: 260 --DNPDQNTEDYLFQVI---LEKQIRIPRSLSVKAASVLKSFLNKDPKER 304
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 31/216 (14%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ---GHLEWLTEIKHLGQL 131
VLG GGFG VF A TG + A K+LN++ L+ G+ + E K L ++
Sbjct: 192 VLGRGGFGEVF---------ACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 132 YHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRT---GASYIQPLSWTIRMKVALG 187
H + + Y E L LV M G + H++ + +P + ++
Sbjct: 243 -HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV-- 299
Query: 188 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA---KDGPTGSQSHVSTRVM 244
GL +LH + +IYRD K N+LLD + N ++SD GLA K G T ++ +
Sbjct: 300 --SGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA----- 350
Query: 245 GTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
GT G+ APE + D ++ GV L EM++ R
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 88/187 (47%), Gaps = 9/187 (4%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L H N+VK G+ E + + L E+ G L + R P R
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFF 110
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
L A G+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++
Sbjct: 111 HQLMA--GVVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 244 MGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVIDKNRPS-REHNLIEWAKPY 301
GT Y APE + A+ DV+S G+VL ML+G D+ S +E++ + K Y
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 226
Query: 302 LQSKRRI 308
L ++I
Sbjct: 227 LNPWKKI 233
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 86/180 (47%), Gaps = 9/180 (5%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAK 190
L H N+VK G+ E + + L E+ G L + R P R L A
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMA-- 115
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y
Sbjct: 116 GVVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 251 APEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVIDKNRPS-REHNLIEWAKPYLQSKRRI 308
APE + A+ DV+S G+VL ML+G D+ S +E++ + K YL ++I
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 15/212 (7%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+F+ +LGEG F V + A +R ++ + + +E+ ++ ++ +
Sbjct: 38 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV--M 91
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALG 187
+L HP VKL +C +DD +L + G L ++ + G+ T
Sbjct: 92 SRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGS-----FDETCTRFYTAE 145
Query: 188 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 247
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 146 IVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 203
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
Y +PE + SD+++ G ++ ++++G
Sbjct: 204 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 70 FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE---WLTEIK 126
++ VLG+G FG V TG AVK +++ ++ + L E++
Sbjct: 34 YKGQRVLGKGSFGEVI---------LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 84
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
L QL HPN++KL + + + LV E G L + + + S ++
Sbjct: 85 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR-----KRFSEVDAARIIR 139
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLD---LNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
G+ Y+H K K+++RD K N+LL+ + N ++ DFGL+ +
Sbjct: 140 QVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK--- 194
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+GT Y APE + G K DV+S GV+L +LSG
Sbjct: 195 IGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 229
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 86/180 (47%), Gaps = 9/180 (5%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAK 190
L H N+VK G+ E + + L E+ G L + R P R L A
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMA-- 115
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y
Sbjct: 116 GVVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 251 APEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVIDKNRPS-REHNLIEWAKPYLQSKRRI 308
APE + A+ DV+S G+VL ML+G D+ S +E++ + K YL ++I
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 86/180 (47%), Gaps = 9/180 (5%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAK 190
L H N+VK G+ E + + L E+ G L + R P R L A
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMA-- 114
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y
Sbjct: 115 GVVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 172
Query: 251 APEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVIDKNRPS-REHNLIEWAKPYLQSKRRI 308
APE + A+ DV+S G+VL ML+G D+ S +E++ + K YL ++I
Sbjct: 173 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 232
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 86/180 (47%), Gaps = 9/180 (5%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAK 190
L H N+VK G+ E + + L E+ G L + R P R L A
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMA-- 115
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y
Sbjct: 116 GVVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 251 APEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVIDKNRPS-REHNLIEWAKPYLQSKRRI 308
APE + A+ DV+S G+VL ML+G D+ S +E++ + K YL ++I
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 96/217 (44%), Gaps = 29/217 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGH---LEWLTEI 125
+FR VLG G F V T ++A+K + +E+L+G +E EI
Sbjct: 21 DFR--DVLGTGAFSEVILA---------EDKRTQKLVAIKCIAKEALEGKEGSME--NEI 67
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
L ++ HPN+V L H L+ + + G L + + G + S ++
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----RLI 122
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNIL---LDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
+ YLH +++RD K N+L LD + +SDFGL+K GS V +
Sbjct: 123 FQVLDAVKYLHD--LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLST 177
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GT GY APE +A + D +S GV+ +L G
Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 86/180 (47%), Gaps = 9/180 (5%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAK 190
L H N+VK G+ E + + L E+ G L + R P R L A
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMA-- 115
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y
Sbjct: 116 GVVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 251 APEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVIDKNRPS-REHNLIEWAKPYLQSKRRI 308
APE + A+ DV+S G+VL ML+G D+ S +E++ + K YL ++I
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 88/187 (47%), Gaps = 9/187 (4%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L H N+VK G+ E + + L E+ G L + R P R
Sbjct: 55 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFF 111
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
L A G+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++
Sbjct: 112 HQLMA--GVVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 244 MGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVIDKNRPS-REHNLIEWAKPY 301
GT Y APE + A+ DV+S G+VL ML+G D+ S +E++ + K Y
Sbjct: 168 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 227
Query: 302 LQSKRRI 308
L ++I
Sbjct: 228 LNPWKKI 234
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-NQESLQGHLEWLTEIKHLGQLYH 133
+GEG FG V +G +P P M +A+K N S ++L E + Q H
Sbjct: 17 CIGEGQFGDVHQG----IYMSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
P++VKLIG + ++ ++ E G L + L S L + A + LA
Sbjct: 71 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFS----LDLASLILYAYQLSTALA 125
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 253
YL S + ++RD N+L+ N KL DFGL++ + S + + APE
Sbjct: 126 YLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPI-KWMAPE 182
Query: 254 YMATGHLTAKSDVYSFGVVLLEML 277
+ T+ SDV+ FGV + E+L
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 86/180 (47%), Gaps = 9/180 (5%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAK 190
L H N+VK G+ E + + L E+ G L + R P R L A
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMA-- 115
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y
Sbjct: 116 GVVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 251 APEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVIDKNRPS-REHNLIEWAKPYLQSKRRI 308
APE + A+ DV+S G+VL ML+G D+ S +E++ + K YL ++I
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 86/180 (47%), Gaps = 9/180 (5%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAK 190
L H N+VK G+ E + + L E+ G L + R P R L A
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMA-- 115
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y
Sbjct: 116 GVVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 251 APEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVIDKNRPS-REHNLIEWAKPYLQSKRRI 308
APE + A+ DV+S G+VL ML+G D+ S +E++ + K YL ++I
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 86/180 (47%), Gaps = 9/180 (5%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAK 190
L H N+VK G+ E + + L E+ G L + R P R L A
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMA-- 115
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y
Sbjct: 116 GVVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 251 APEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVIDKNRPS-REHNLIEWAKPYLQSKRRI 308
APE + A+ DV+S G+VL ML+G D+ S +E++ + K YL ++I
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKI 233
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 86/180 (47%), Gaps = 9/180 (5%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAK 190
L H N+VK G+ E + + L E+ G L + R P R L A
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMA-- 116
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y
Sbjct: 117 GVVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 251 APEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVIDKNRPS-REHNLIEWAKPYLQSKRRI 308
APE + A+ DV+S G+VL ML+G D+ S +E++ + K YL ++I
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 234
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 26/216 (12%)
Query: 70 FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE---WLTEIK 126
++ VLG+G FG V TG AVK +++ ++ + L E++
Sbjct: 28 YKGQRVLGKGSFGEVI---------LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 78
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
L QL HPN+ KL + + + LV E G L + + + S ++
Sbjct: 79 LLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISR-----KRFSEVDAARIIR 133
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLD---LNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
G+ Y H K K+++RD K N+LL+ + N ++ DFGL+ +
Sbjct: 134 QVLSGITYXH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK--- 188
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+GT Y APE + G K DV+S GV+L +LSG
Sbjct: 189 IGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 99/227 (43%), Gaps = 42/227 (18%)
Query: 79 GGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTE--IKHLGQLYHPNL 136
G FGCV+K + +AVK LQ W +E I + H NL
Sbjct: 26 GRFGCVWKAQL-----------MNDFVAVKIF---PLQDKQSWQSEREIFSTPGMKHENL 71
Query: 137 VKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKG 191
++ I G LE + L+ F KGSL ++L ++W VA ++G
Sbjct: 72 LQFIAAEKRGSNLEVE-LWLITAFHDKGSLTDYLKGN------IITWNELCHVAETMSRG 124
Query: 192 LAYLHSD---------KAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
L+YLH D K + +RDFK+ N+LL + A L+DFGLA G +
Sbjct: 125 LSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHG 184
Query: 243 VMGTYGYAAPEYMATG-----HLTAKSDVYSFGVVLLEMLSGRRVID 284
+GT Y APE + + D+Y+ G+VL E++S + D
Sbjct: 185 QVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 86/180 (47%), Gaps = 9/180 (5%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAK 190
L H N+VK G+ E + + L E+ G L + R P R L A
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMA-- 115
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y
Sbjct: 116 GVVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 251 APEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVIDKNRPS-REHNLIEWAKPYLQSKRRI 308
APE + A+ DV+S G+VL ML+G D+ S +E++ + K YL ++I
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 96/217 (44%), Gaps = 29/217 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGH---LEWLTEI 125
+FR VLG G F V T ++A+K + +E+L+G +E EI
Sbjct: 21 DFR--DVLGTGAFSEVILA---------EDKRTQKLVAIKCIAKEALEGKEGSME--NEI 67
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
L ++ HPN+V L H L+ + + G L + + G + S ++
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----RLI 122
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNIL---LDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
+ YLH +++RD K N+L LD + +SDFGL+K GS V +
Sbjct: 123 FQVLDAVKYLHD--LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLST 177
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GT GY APE +A + D +S GV+ +L G
Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-NQESLQGHLEWLTEIKHLGQLYH 133
+GEG FG V +G +P P M +A+K N S ++L E + Q H
Sbjct: 17 CIGEGQFGDVHQG----IYMSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
P++VKLIG E+ ++ E G L + F Y L+ I L A LA
Sbjct: 71 PHIVKLIGVITENP-VWIIMELCTLGELRS--FLQVRKYSLDLASLILYAYQLSTA--LA 125
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 253
YL S + ++RD N+L+ N KL DFGL++ S + +++ + APE
Sbjct: 126 YLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPE 182
Query: 254 YMATGHLTAKSDVYSFGVVLLEML 277
+ T+ SDV+ FGV + E+L
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 86/180 (47%), Gaps = 9/180 (5%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAK 190
L H N+VK G+ E + + L E+ G L + R P R L A
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMA-- 116
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y
Sbjct: 117 GVVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 251 APEYMATGHLTAKS-DVYSFGVVLLEMLSGRRVIDKNRPS-REHNLIEWAKPYLQSKRRI 308
APE + A+ DV+S G+VL ML+G D+ S +E++ + K YL ++I
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 234
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 95/215 (44%), Gaps = 25/215 (11%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL-TEIKH 127
+FR VLG G F V T ++A+K + +E+L+G + EI
Sbjct: 21 DFR--DVLGTGAFSEVILA---------EDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALG 187
L ++ HPN+V L H L+ + + G L + + G + S ++
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----RLIFQ 124
Query: 188 AAKGLAYLHSDKAKVIYRDFKTSNIL---LDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 244
+ YLH +++RD K N+L LD + +SDFGL+K GS V +
Sbjct: 125 VLDAVKYLHD--LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTAC 179
Query: 245 GTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GT GY APE +A + D +S GV+ +L G
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 15/203 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-NQESLQGHLEWLTEIKHLGQLYHP 134
+GEG FG V +G +P P M +A+K N S ++L E + Q HP
Sbjct: 398 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAY 194
++VKLIG E+ ++ E G L + L S L + A + LAY
Sbjct: 452 HIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFS----LDLASLILYAYQLSTALAY 506
Query: 195 LHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEY 254
L S + ++RD N+L+ N KL DFGL++ S + +++ + APE
Sbjct: 507 LES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPES 563
Query: 255 MATGHLTAKSDVYSFGVVLLEML 277
+ T+ SDV+ FGV + E+L
Sbjct: 564 INFRRFTSASDVWMFGVCMWEIL 586
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVI-AVKRLNQESLQGHLEWLTEIKHLGQLYH 133
+GEG FG V +G +P P + I K +S++ ++L E + Q H
Sbjct: 20 CIGEGQFGDVHQG----IYMSPENPALAVAIKTCKNCTSDSVRE--KFLQEALTMRQFDH 73
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
P++VKLIG E+ ++ E G L + F Y L+ I L A LA
Sbjct: 74 PHIVKLIGVITENP-VWIIMELCTLGELRS--FLQVRKYSLDLASLILYAYQLSTA--LA 128
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 253
YL S + ++RD N+L+ N KL DFGL++ S + +++ + APE
Sbjct: 129 YLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPE 185
Query: 254 YMATGHLTAKSDVYSFGVVLLEML 277
+ T+ SDV+ FGV + E+L
Sbjct: 186 SINFRRFTSASDVWMFGVCMWEIL 209
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVI-AVKRLNQESLQGHLEWLTEIKHLGQLYH 133
+GEG FG V +G +P P + I K +S++ ++L E + Q H
Sbjct: 19 CIGEGQFGDVHQG----IYMSPENPALAVAIKTCKNCTSDSVRE--KFLQEALTMRQFDH 72
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
P++VKLIG + ++ ++ E G L + F Y L+ I L A LA
Sbjct: 73 PHIVKLIGV-ITENPVWIIMELCTLGELRS--FLQVRKYSLDLASLILYAYQLSTA--LA 127
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 253
YL S + ++RD N+L+ N KL DFGL++ S + +++ + APE
Sbjct: 128 YLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPE 184
Query: 254 YMATGHLTAKSDVYSFGVVLLEML 277
+ T+ SDV+ FGV + E+L
Sbjct: 185 SINFRRFTSASDVWMFGVCMWEIL 208
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVI-AVKRLNQESLQGHLEWLTEIKHLGQLYH 133
+GEG FG V +G +P P + I K +S++ ++L E + Q H
Sbjct: 14 CIGEGQFGDVHQG----IYMSPENPALAVAIKTCKNCTSDSVRE--KFLQEALTMRQFDH 67
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
P++VKLIG E+ ++ E G L + F Y L+ I L A LA
Sbjct: 68 PHIVKLIGVITENP-VWIIMELCTLGELRS--FLQVRKYSLDLASLILYAYQLSTA--LA 122
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 253
YL S + ++RD N+L+ N KL DFGL++ S + +++ + APE
Sbjct: 123 YLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPE 179
Query: 254 YMATGHLTAKSDVYSFGVVLLEML 277
+ T+ SDV+ FGV + E+L
Sbjct: 180 SINFRRFTSASDVWMFGVCMWEIL 203
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 102/223 (45%), Gaps = 32/223 (14%)
Query: 67 TRNFRPDSV-----LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQ 116
TR+F D LG+G FG V Y + ++A+K ++ +E ++
Sbjct: 17 TRHFTIDDFEIGRPLGKGKFGNV---------YLAREKKSHFIVALKVLFKSQIEKEGVE 67
Query: 117 GHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPL 176
L EI+ L+HPN+++L Y + L+ E+ P+G L L + ++ +
Sbjct: 68 HQLRREIEIQ--AHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL-QKSCTFDEQR 124
Query: 177 SWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ 236
+ TI ++A L Y H K VI+RD K N+LL L K++DFG + P+ +
Sbjct: 125 TATIMEELA----DALMYCHGKK--VIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRR 178
Query: 237 SHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y PE + K D++ GV+ E+L G
Sbjct: 179 K----TMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVI-AVKRLNQESLQGHLEWLTEIKHLGQLYH 133
+GEG FG V +G +P P + I K +S++ ++L E + Q H
Sbjct: 17 CIGEGQFGDVHQG----IYMSPENPALAVAIKTCKNCTSDSVRE--KFLQEALTMRQFDH 70
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
P++VKLIG + ++ ++ E G L + F Y L+ I L A LA
Sbjct: 71 PHIVKLIGV-ITENPVWIIMELCTLGELRS--FLQVRKYSLDLASLILYAYQLSTA--LA 125
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 253
YL S + ++RD N+L+ N KL DFGL++ S + +++ + APE
Sbjct: 126 YLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPE 182
Query: 254 YMATGHLTAKSDVYSFGVVLLEML 277
+ T+ SDV+ FGV + E+L
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 18/185 (9%)
Query: 103 MVIAVKRLNQESLQGHLEWLTEIKHLGQLY--HPNLVKLIGYCLEDDHRLLVYEFMPKGS 160
M + +RL+ E L+ E H+ + HP+++ LI LV++ M KG
Sbjct: 127 MEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGE 186
Query: 161 LENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA 220
L ++L A LS + + +++LH++ +++RD K NILLD N
Sbjct: 187 LFDYLTEKVA-----LSEKETRSIMRSLLEAVSFLHANN--IVHRDLKPENILLDDNMQI 239
Query: 221 KLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGH------LTAKSDVYSFGVVLL 274
+LSDFG + G + + GT GY APE + + D+++ GV+L
Sbjct: 240 RLSDFGFSCHLEPGEKLR---ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILF 296
Query: 275 EMLSG 279
+L+G
Sbjct: 297 TLLAG 301
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVI-AVKRLNQESLQGHLEWLTEIKHLGQLYH 133
+GEG FG V +G +P P + I K +S++ ++L E + Q H
Sbjct: 22 CIGEGQFGDVHQG----IYMSPENPALAVAIKTCKNCTSDSVRE--KFLQEALTMRQFDH 75
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
P++VKLIG + ++ ++ E G L + F Y L+ I L A LA
Sbjct: 76 PHIVKLIGV-ITENPVWIIMELCTLGELRS--FLQVRKYSLDLASLILYAYQLSTA--LA 130
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 253
YL S + ++RD N+L+ N KL DFGL++ S + +++ + APE
Sbjct: 131 YLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPE 187
Query: 254 YMATGHLTAKSDVYSFGVVLLEML 277
+ T+ SDV+ FGV + E+L
Sbjct: 188 SINFRRFTSASDVWMFGVCMWEIL 211
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVI-AVKRLNQESLQGHLEWLTEIKHLGQLYH 133
+GEG FG V +G +P P + I K +S++ ++L E + Q H
Sbjct: 45 CIGEGQFGDVHQG----IYMSPENPALAVAIKTCKNCTSDSVRE--KFLQEALTMRQFDH 98
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
P++VKLIG + ++ ++ E G L + F Y L+ I L A LA
Sbjct: 99 PHIVKLIG-VITENPVWIIMELCTLGELRS--FLQVRKYSLDLASLILYAYQLSTA--LA 153
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 253
YL S + ++RD N+L+ N KL DFGL++ S + +++ + APE
Sbjct: 154 YLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPE 210
Query: 254 YMATGHLTAKSDVYSFGVVLLEML 277
+ T+ SDV+ FGV + E+L
Sbjct: 211 SINFRRFTSASDVWMFGVCMWEIL 234
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 90/183 (49%), Gaps = 18/183 (9%)
Query: 101 TGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGS 160
+G +AVK ++ Q E+ + H N+V++ L + ++ EF+ G+
Sbjct: 69 SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128
Query: 161 LENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA 220
L + + + + Q + V + LAYLH+ VI+RD K+ +ILL L+
Sbjct: 129 LTDIVSQVRLNEEQIAT------VCEAVLQALAYLHAQG--VIHRDIKSDSILLTLDGRV 180
Query: 221 KLSDFG----LAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEM 276
KLSDFG ++KD P ++GT + APE ++ + D++S G++++EM
Sbjct: 181 KLSDFGFCAQISKDVPK------RKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEM 234
Query: 277 LSG 279
+ G
Sbjct: 235 VDG 237
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 30/226 (13%)
Query: 70 FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLG 129
F+ + + G+G FG V G TGM +A+K++ Q+ + E L ++ L
Sbjct: 25 FQVERMAGQGTFGTVQLG---------KEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLA 74
Query: 130 QLYHPNLVKLIGYCL---EDDHRLL----VYEFMPKGSLENHLFRTGASYI--QPLSWTI 180
L+HPN+V+L Y E D R + V E++P + L R +Y Q I
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP-----DTLHRCCRNYYRRQVAPPPI 129
Query: 181 RMKVAL-GAAKGLAYLHSDKAKVIYRDFKTSNILL-DLNYNAKLSDFGLAKDGPTGSQSH 238
+KV L + + LH V +RD K N+L+ + + KL DFG AK S S
Sbjct: 130 LIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAK---KLSPSE 186
Query: 239 VSTRVMGTYGYAAPEYM-ATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
+ + + Y APE + H T D++S G + EM+ G +
Sbjct: 187 PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIF 232
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH--VSTRVMGTY 247
+GL Y+HS A+VI+RD K SN+L++ N K+ DFG+A+ T H T + T
Sbjct: 170 RGLKYMHS--AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 248 GYAAPEYMATGH-LTAKSDVYSFGVVLLEMLSGRRVI 283
Y APE M + H T D++S G + EML+ R++
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 264
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 80/161 (49%), Gaps = 18/161 (11%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
L E + L + P LVKL + +D+ L +V E+MP G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYMPGGDMFSHLRRIG-RFSEPHARFY 146
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSH 238
++ L YLHS +IYRD K N+L+D K++DFG AK G T
Sbjct: 147 AAQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX--- 197
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 198 ----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 95/215 (44%), Gaps = 25/215 (11%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL-TEIKH 127
+FR VLG G F V T ++A+K + +++L+G + EI
Sbjct: 21 DFR--DVLGTGAFSEVILA---------EDKRTQKLVAIKCIAKKALEGKEGSMENEIAV 69
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALG 187
L ++ HPN+V L H L+ + + G L + + G + S ++
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----RLIFQ 124
Query: 188 AAKGLAYLHSDKAKVIYRDFKTSNIL---LDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 244
+ YLH +++RD K N+L LD + +SDFGL+K GS V +
Sbjct: 125 VLDAVKYLHD--LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTAC 179
Query: 245 GTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GT GY APE +A + D +S GV+ +L G
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 79 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 80/161 (49%), Gaps = 18/161 (11%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
L E + L + P LVKL + +D+ L +V E+MP G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYMPGGDMFSHLRRIG-RFSEPHARFY 146
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSH 238
++ L YLHS +IYRD K N+L+D K++DFG AK G T
Sbjct: 147 AAQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX--- 197
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 198 ----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 91/214 (42%), Gaps = 23/214 (10%)
Query: 70 FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL-TEIKHL 128
F LG G F V TG + AVK + +++L+G + EI L
Sbjct: 24 FEFKETLGTGAFSEVVLA---------EEKATGKLFAVKCIPKKALKGKESSIENEIAVL 74
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
++ H N+V L +H LV + + G L + + G + S IR +
Sbjct: 75 RKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVL---- 130
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILL---DLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 245
+ YLH + +++RD K N+L D +SDFGL+K G V + G
Sbjct: 131 -DAVYYLH--RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTACG 184
Query: 246 TYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
T GY APE +A + D +S GV+ +L G
Sbjct: 185 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 129/302 (42%), Gaps = 41/302 (13%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGH--LEWLTEI 125
+ F +LG+G FG V + + + G+ + +AVK L + + E+L E
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQED------GSFVKVAVKMLKADIIASSDIEEFLREA 76
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHR------LLVYEFMPKGSLENHLF--RTGAS-YIQPL 176
+ + HP++ KL+G L + +++ FM G L L R G + + PL
Sbjct: 77 ACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPL 136
Query: 177 SWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ 236
+R V + A G+ YL S I+RD N +L + ++DFGL++ +G
Sbjct: 137 QTLVRFMVDI--ACGMEYLSS--RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY 192
Query: 237 SHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIE 296
+ A E +A T SDV++FGV + E+++ R + IE
Sbjct: 193 YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT--------RGQTPYAGIE 244
Query: 297 WAKP--YLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALE 354
A+ YL R+ Q + +E Y L +C S +PK RP+ + LE
Sbjct: 245 NAEIYNYLIGGNRLKQPPEC-MEEVYD---------LMYQCWSADPKQRPSFTCLRMELE 294
Query: 355 QI 356
I
Sbjct: 295 NI 296
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 95/219 (43%), Gaps = 34/219 (15%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
R + D +G G F V+KG E T A + ++L + Q E E +
Sbjct: 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVA----WCELQDRKLTKSERQRFKE---EAEX 78
Query: 128 LGQLYHPNLVKLIG---------YCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPL-S 177
L L HPN+V+ C+ +LV E G+L+ +L R I+ L S
Sbjct: 79 LKGLQHPNIVRFYDSWESTVKGKKCI-----VLVTELXTSGTLKTYLKRFKVXKIKVLRS 133
Query: 178 WTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLD-LNYNAKLSDFGLAKDGPTGSQ 236
W ++ KGL +LH+ +I+RD K NI + + K+ D GLA T +
Sbjct: 134 WCRQI------LKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA----TLKR 183
Query: 237 SHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLE 275
+ + V+GT + APE + DVY+FG LE
Sbjct: 184 ASFAKAVIGTPEFXAPEXYEEKY-DESVDVYAFGXCXLE 221
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 34/243 (13%)
Query: 55 IKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ-- 112
+K+ SF+ + +G G +G V R TG +A+K++
Sbjct: 41 LKARSFDVTFDVGDEYEIIETIGNGAYGVVSSA---------RRRLTGQQVAIKKIPNAF 91
Query: 113 ESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLEN-----HLFR 167
+ + L E+K L H N++ ++D R V P G ++ L
Sbjct: 92 DVVTNAKRTLRELKILKHFKHDNII-----AIKDILRPTV----PYGEFKSVYVVLDLME 142
Query: 168 TGASYI----QPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLS 223
+ I QPL+ +GL Y+HS A+VI+RD K SN+L++ N K+
Sbjct: 143 SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHS--AQVIHRDLKPSNLLVNENCELKIG 200
Query: 224 DFGLAKDGPTGSQSH--VSTRVMGTYGYAAPEYMATGH-LTAKSDVYSFGVVLLEMLSGR 280
DFG+A+ T H T + T Y APE M + H T D++S G + EML+ R
Sbjct: 201 DFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
Query: 281 RVI 283
++
Sbjct: 261 QLF 263
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 21/154 (13%)
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSW----TIRMKVALGAA 189
P +V+L +D + +V E+MP G L N + ++Y P W T + +AL A
Sbjct: 135 PWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM----SNYDVPEKWAKFYTAEVVLALDAI 190
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
+ +H RD K N+LLD + + KL+DFG H T V GT Y
Sbjct: 191 HSMGLIH--------RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDY 241
Query: 250 AAPEYMAT----GHLTAKSDVYSFGVVLLEMLSG 279
+PE + + G+ + D +S GV L EML G
Sbjct: 242 ISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 32/210 (15%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
LG G FG V G W ++ +A+K + + S+ E++ E K + L H
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-----------VAIKMIKEGSMSED-EFIEEAKVMMNLSHE 64
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASY-IQPLSWTIRMKVALGAAKGLA 193
LV+L G C + ++ E+M G L N+L + Q L +++ + +
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAME 119
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK----DGPTGSQ-SHVSTRVMGTYG 248
YL S + ++RD N L++ K+SDFGL++ D T S+ S R
Sbjct: 120 YLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVR------ 171
Query: 249 YAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
++ PE + ++KSD+++FGV++ E+ S
Sbjct: 172 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 38/249 (15%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
LG G FG V G W ++ +A+K + + S+ E++ E K + L H
Sbjct: 32 LGTGQFGVVKYGKWRGQYD-----------VAIKMIKEGSMSED-EFIEEAKVMMNLSHE 79
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASY-IQPLSWTIRMKVALGAAKGLA 193
LV+L G C + ++ E+M G L N+L + Q L +++ + +
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAME 134
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK----DGPTGSQ-SHVSTRVMGTYG 248
YL S + ++RD N L++ K+SDFGL++ D T S S R
Sbjct: 135 YLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVR------ 186
Query: 249 YAAPEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDK--NRPSREH--NLIEWAKPYLQ 303
++ PE + ++KSD+++FGV++ E+ S G+ ++ N + EH + +P+L
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA 246
Query: 304 SKRRIFQVM 312
S+ +++ +M
Sbjct: 247 SE-KVYTIM 254
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 15/203 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-NQESLQGHLEWLTEIKHLGQLYHP 134
+GEG FG V +G +P P M +A+K N S ++L E + Q HP
Sbjct: 398 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAY 194
++VKLIG E+ ++ E G L + L S L + A + LAY
Sbjct: 452 HIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFS----LDLASLILYAYQLSTALAY 506
Query: 195 LHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEY 254
L S + ++RD N+L+ KL DFGL++ S + +++ + APE
Sbjct: 507 LES--KRFVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPES 563
Query: 255 MATGHLTAKSDVYSFGVVLLEML 277
+ T+ SDV+ FGV + E+L
Sbjct: 564 INFRRFTSASDVWMFGVCMWEIL 586
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 33 SPIGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 84 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 131
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 132 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVA 189
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 190 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 30/217 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 42 QFERIKTLGTGSFGRVM---LVKHK------ETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKV 184
+ L + P LVKL Y +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 93 RILQAVNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQI 150
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTR 242
L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 151 VLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------- 197
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 70 FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEIK 126
F LG G FG V + +H TG A+K L+++ L+ L E +
Sbjct: 43 FERIKTLGTGSFGRVM---LVKHK------ETGNHFAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
L + P LVKL Y +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 94 ILQAVNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIV 151
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTRV 243
L YLHS +IYRD K N+L+D +++DFG AK G T +
Sbjct: 152 LT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-------L 198
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GT Y APE + + D ++ GV++ EM +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 35 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 86 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 133
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 134 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA 191
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 192 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 33 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 84 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 131
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 132 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVA 189
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 190 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 101/238 (42%), Gaps = 48/238 (20%)
Query: 69 NFRPDSVLGEGGFGCVFKG--WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIK 126
+F +VLG+G FG V K +D YA I R +E L L+E+
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYA---------IKKIRHTEEKLST---ILSEVM 54
Query: 127 HLGQLYHPNLVKLIGYCLEDDH-------------RLLVYEFMPKGSLENHLFRTGASYI 173
L L H +V+ LE + + E+ +L + + +
Sbjct: 55 LLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQ 114
Query: 174 QPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD--- 230
+ W + ++ + L+Y+HS +I+RD K NI +D + N K+ DFGLAK+
Sbjct: 115 RDEYWRLFRQIL----EALSYIHSQG--IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHR 168
Query: 231 ----------GPTGSQSHVSTRVMGTYGYAAPEYM-ATGHLTAKSDVYSFGVVLLEML 277
GS ++ T +GT Y A E + TGH K D+YS G++ EM+
Sbjct: 169 SLDILKLDSQNLPGSSDNL-TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 30/217 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 42 QFERIKTLGTGSFGRVM---LVKHK------ETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKV 184
+ L + P LVKL Y +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 93 RILQAVNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQI 150
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTR 242
L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 151 VLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------- 197
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 70 FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH-- 127
F LG G FG V + +H TG A+K L+++ + L EI+H
Sbjct: 43 FERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVK----LKEIEHTL 89
Query: 128 -----LGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIR 181
L + P LVKL + +D+ L +V E+ P G + +HL R G + +P +
Sbjct: 90 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIG-RFSEPHARFYA 147
Query: 182 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHV 239
++ L YLHS +IYRD K N+++D K++DFGLAK G T
Sbjct: 148 AQIVLT----FEYLHS--LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWX---- 197
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 79 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 35 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 86 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 133
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 134 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA 191
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 192 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 79 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDH 126
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVA 184
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 31/213 (14%)
Query: 75 VLGEGGFGCVFK--GWIDEHTYAPARPGTGMVIAVKRLNQESLQGH--LEWLTEIKHLGQ 130
+LG+G FG V K I + YA VK +N+ S + L E++ L +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYA-----------VKVINKASAKNKDTSTILREVELLKK 77
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAK 190
L HPN++KL + +V E G L + + + + S ++
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFS 132
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLD---LNYNAKLSDFGLAKDGPTGSQSHVSTR-VMGT 246
G+ Y+H K +++RD K NILL+ + + K+ DFGL+ T Q + + +GT
Sbjct: 133 GITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS----TCFQQNTKMKDRIGT 186
Query: 247 YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
Y APE + G K DV+S GV+L +LSG
Sbjct: 187 AYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 42/224 (18%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 40 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHM 90
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 91 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 138
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 139 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 196
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGRRVI 283
TR Y APE M H D++S G ++ E+L+GR +
Sbjct: 197 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V A TG+ +AVK+L++ +S+ E++ L +
Sbjct: 39 SPVGSGAYGSVC---------AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 89
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 90 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 137
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 138 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVA 195
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 196 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 15/204 (7%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-NQESLQGHLEWLTEIKHLGQLYH 133
+GEG FG V +G +P P M +A+K N S ++L E + Q H
Sbjct: 17 CIGEGQFGDVHQG----IYMSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
P++VKLIG + ++ ++ E G L + L S L + A + LA
Sbjct: 71 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFS----LDLASLILYAYQLSTALA 125
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 253
YL S + ++RD N+L+ KL DFGL++ S + +++ + APE
Sbjct: 126 YLESKR--FVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPE 182
Query: 254 YMATGHLTAKSDVYSFGVVLLEML 277
+ T+ SDV+ FGV + E+L
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 79 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 35 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 86 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 133
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 134 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA 191
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 192 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 42/224 (18%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 51 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 101
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 102 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 149
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 150 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVA 207
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGRRVI 283
TR Y APE M H D++S G ++ E+L+GR +
Sbjct: 208 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 42/224 (18%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + +G+ IAVK+L++ +S+ E++ L +
Sbjct: 57 SPVGSGAYGSVCSSY---------DVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHM 107
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 108 KHENVIGLLDV------------FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 155
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 156 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 213
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGRRVI 283
TR Y APE M H D++S G ++ E+L+GR +
Sbjct: 214 TR-----WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLF 252
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL-TEIKHLGQLYHP 134
LG G FG V ++E + +G+ +K +N++ Q +E + EI+ L L HP
Sbjct: 30 LGSGAFGDV--HLVEERS-------SGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP 80
Query: 135 NLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
N++K+ ED H + +V E G L + A + LS ++ LA
Sbjct: 81 NIIKIFE-VFEDYHNMYIVMETCEGGELLERIVSAQARG-KALSEGYVAELMKQMMNALA 138
Query: 194 YLHSDKAKVIYRDFKTSNILL-DLNYNA--KLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
Y HS V+++D K NIL D + ++ K+ DFGLA+ S H ST GT Y
Sbjct: 139 YFHSQ--HVVHKDLKPENILFQDTSPHSPIKIIDFGLAE--LFKSDEH-STNAAGTALYM 193
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLSG 279
APE +T K D++S GVV+ +L+G
Sbjct: 194 APEVFKRD-VTFKCDIWSAGVVMYFLLTG 221
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 40 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 90
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 91 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 138
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 139 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 196
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 197 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 15/183 (8%)
Query: 105 IAVKRLNQESLQG---HLEWLTEIKHLGQLYHPNLVKL--IGYCLEDDHRL--LVYEFMP 157
+AVK L + + +L + E ++ L HP +V + G L +V E++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 158 KGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLN 217
+L + + G P++ ++V A + L + H + +I+RD K +NIL+
Sbjct: 100 GVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANILISAT 152
Query: 218 YNAKLSDFGLAKD-GPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEM 276
K+ DFG+A+ +G+ + V+GT Y +PE + A+SDVYS G VL E+
Sbjct: 153 NAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 277 LSG 279
L+G
Sbjct: 213 LTG 215
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 40 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 90
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 91 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 138
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 139 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 196
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 197 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 30 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 81 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 128
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 129 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 186
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 187 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 30 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 81 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 128
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 129 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 186
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 187 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 27/210 (12%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE--WLTEIKHLGQLYH 133
+GEG +G VFK TG ++A+K+ + ++ L EI+ L QL H
Sbjct: 11 IGEGSYGVVFKC---------RNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSL-ENHLFRTGAS--YIQPLSWTIRMKVALGAAK 190
PNLV L+ LV+E+ L E ++ G ++ ++W +
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ--------TLQ 113
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
+ + H K I+RD K NIL+ + KL DFG A+ TG + V T Y
Sbjct: 114 AVNFCH--KHNCIHRDVKPENILITKHSVIKLCDFGFAR-LLTGPSDYYDDEV-ATRWYR 169
Query: 251 APEYMA-TGHLTAKSDVYSFGVVLLEMLSG 279
+PE + DV++ G V E+LSG
Sbjct: 170 SPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 79 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 79 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 15/217 (6%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT 123
K +F+ +LGEG F V + A +R ++ + + +E+ ++
Sbjct: 5 KKRPEDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRER 60
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQPLSWTIRM 182
++ + +L HP VKL + +DD +L + G L ++ + G+ T
Sbjct: 61 DV--MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS-----FDETCTR 112
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
L YLH +I+RD K NILL+ + + +++DFG AK S+ +
Sbjct: 113 FYTAEIVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 170
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+GT Y +PE + SD+++ G ++ ++++G
Sbjct: 171 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 15/217 (6%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT 123
K +F+ +LGEG F V + A +R ++ + + +E+ ++
Sbjct: 4 KKRPEDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRER 59
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQPLSWTIRM 182
++ + +L HP VKL + +DD +L + G L ++ + G+ T
Sbjct: 60 DV--MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS-----FDETCTR 111
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
L YLH +I+RD K NILL+ + + +++DFG AK S+ +
Sbjct: 112 FYTAEIVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 169
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+GT Y +PE + SD+++ G ++ ++++G
Sbjct: 170 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 15/217 (6%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT 123
K +F+ +LGEG F V + A +R ++ + + +E+ ++
Sbjct: 3 KKRPEDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRER 58
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQPLSWTIRM 182
++ + +L HP VKL + +DD +L + G L ++ + G+ T
Sbjct: 59 DV--MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS-----FDETCTR 110
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
L YLH +I+RD K NILL+ + + +++DFG AK S+ +
Sbjct: 111 FYTAEIVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 168
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+GT Y +PE + SD+++ G ++ ++++G
Sbjct: 169 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 35 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 86 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 133
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 134 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 191
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 192 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 42/224 (18%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 34 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 85 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 132
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 133 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 190
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGRRVI 283
TR Y APE M H D++S G ++ E+L+GR +
Sbjct: 191 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 39 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 89
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 90 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 137
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 138 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 195
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 196 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 33 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 84 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 131
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 132 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 189
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 190 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 27 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 77
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 78 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 125
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 126 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 183
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 184 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 30 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 81 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 128
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 129 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVA 186
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 187 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 116/269 (43%), Gaps = 41/269 (15%)
Query: 100 GTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDD--HRLLVYEFMP 157
G +V+ V ++ S + ++ E L HPN++ ++G C H L+ +MP
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92
Query: 158 KGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLN 217
GSL N + G +++ S + K AL A+G+A+LH+ + + + ++++D +
Sbjct: 93 YGSLYN-VLHEGTNFVVDQSQAV--KFALDMARGMAFLHTLEPLIPRHALNSRSVMIDED 149
Query: 218 YNAKLS--DFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAK---SDVYSFGVV 272
A++S D + P M + APE + +D++SF V+
Sbjct: 150 MTARISMADVKFSFQSPGR---------MYAPAWVAPEALQKKPEDTNRRSADMWSFAVL 200
Query: 273 LLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDARIEG---QYSLGAALKTA 329
L E+++ + P + + +E M +EG G + +
Sbjct: 201 LWELVT------REVPFADLSNMEIG-------------MKVALEGLRPTIPPGISPHVS 241
Query: 330 VLAIKCLSNEPKFRPTMDEVVKALEQIQD 358
L C++ +P RP D +V LE++QD
Sbjct: 242 KLMKICMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 15/217 (6%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT 123
K +F+ +LGEG F V + A +R ++ + + +E+ ++
Sbjct: 6 KKRPEDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRER 61
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQPLSWTIRM 182
++ + +L HP VKL + +DD +L + G L ++ + G+ T
Sbjct: 62 DV--MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS-----FDETCTR 113
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
L YLH +I+RD K NILL+ + + +++DFG AK S+ +
Sbjct: 114 FYTAEIVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 171
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+GT Y +PE + SD+++ G ++ ++++G
Sbjct: 172 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 79 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 42/224 (18%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 34 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 85 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 132
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 133 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 190
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGRRVI 283
TR Y APE M H D++S G ++ E+L+GR +
Sbjct: 191 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 38/249 (15%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
LG G FG V G W ++ +A+K + + S+ E++ E K + L H
Sbjct: 32 LGTGQFGVVKYGKWRGQYD-----------VAIKMIKEGSMSED-EFIEEAKVMMNLSHE 79
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASY-IQPLSWTIRMKVALGAAKGLA 193
LV+L G C + ++ E+M G L N+L + Q L +++ + +
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAME 134
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK----DGPTGSQ-SHVSTRVMGTYG 248
YL S + ++RD N L++ K+SDFGL++ D T S S R
Sbjct: 135 YLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR------ 186
Query: 249 YAAPEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDK--NRPSREH--NLIEWAKPYLQ 303
++ PE + ++KSD+++FGV++ E+ S G+ ++ N + EH + +P+L
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA 246
Query: 304 SKRRIFQVM 312
S+ +++ +M
Sbjct: 247 SE-KVYTIM 254
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 30 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 81 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 128
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 129 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 186
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 187 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 79 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 79 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDH 126
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 47 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 97
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 98 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 145
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 146 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 203
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 204 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 25 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 75
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 76 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 123
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 124 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 181
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 182 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 79 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 34 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 85 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 132
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 133 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVA 190
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 191 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 92/221 (41%), Gaps = 43/221 (19%)
Query: 73 DSVLGEGGFG----CVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
D LGEG F CV K + AVK +++ + +T +K
Sbjct: 16 DKPLGEGSFSICRKCVHKK-------------SNQAFAVKIISKRMEANTQKEITALKLC 62
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL------ENHLFRTGASYIQPLSWTIRM 182
HPN+VKL + H LV E + G L + H T ASYI +R
Sbjct: 63 EG--HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYI------MRK 114
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILL---DLNYNAKLSDFGLAKDGPTGSQSHV 239
V+ A H V++RD K N+L + N K+ DFG A+ P +Q +
Sbjct: 115 LVS-------AVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP-L 166
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
T T YAAPE + D++S GV+L MLSG+
Sbjct: 167 KTPCF-TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 17/163 (10%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLED---DHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
EI L +L HPN+VKL+ L+D DH +V+E + +G + ++PLS
Sbjct: 86 EIAILKKLDHPNVVKLVE-VLDDPNEDHLYMVFELVNQGPV------MEVPTLKPLSEDQ 138
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
KG+ YLH K+I+RD K SN+L+ + + K++DFG++ + GS + +S
Sbjct: 139 ARFYFQDLIKGIEYLHY--QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF-KGSDALLS 195
Query: 241 TRVMGTYGYAAPEYMATGH--LTAKS-DVYSFGVVLLEMLSGR 280
V GT + APE ++ + K+ DV++ GV L + G+
Sbjct: 196 NTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 48 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 99 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 146
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 147 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 204
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 205 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 25 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 75
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 76 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 123
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 124 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 181
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 182 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 51 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 101
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 102 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 149
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 150 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 207
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 208 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 32/210 (15%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
LG G FG V G W ++ +A+K + + S+ E++ E K + L H
Sbjct: 16 LGTGQFGVVKYGKWRGQYD-----------VAIKMIKEGSMSED-EFIEEAKVMMNLSHE 63
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASY-IQPLSWTIRMKVALGAAKGLA 193
LV+L G C + ++ E+M G L N+L + Q L +++ + +
Sbjct: 64 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAME 118
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK----DGPTGSQ-SHVSTRVMGTYG 248
YL S + ++RD N L++ K+SDFGL++ D T S S R
Sbjct: 119 YLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR------ 170
Query: 249 YAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
++ PE + ++KSD+++FGV++ E+ S
Sbjct: 171 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 33 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 84 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 131
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 132 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 189
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 190 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 24 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 75 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 122
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 123 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 180
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 181 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 98/212 (46%), Gaps = 15/212 (7%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+F+ +LGEG F V + A +R ++ + + +E+ ++ ++ +
Sbjct: 33 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV--M 86
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALG 187
+L HP VKL + +DD +L + G L ++ + G+ T
Sbjct: 87 SRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYIRKIGS-----FDETCTRFYTAE 140
Query: 188 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 247
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 141 IVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 198
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
Y +PE + + SD+++ G ++ ++++G
Sbjct: 199 QYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 26 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 76
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 77 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 124
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 125 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 182
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 183 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 32/210 (15%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
LG G FG V G W ++ +A+K + + S+ E++ E K + L H
Sbjct: 12 LGTGQFGVVKYGKWRGQYD-----------VAIKMIKEGSMSED-EFIEEAKVMMNLSHE 59
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASY-IQPLSWTIRMKVALGAAKGLA 193
LV+L G C + ++ E+M G L N+L + Q L +++ + +
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAME 114
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK----DGPTGSQ-SHVSTRVMGTYG 248
YL S + ++RD N L++ K+SDFGL++ D T S S R
Sbjct: 115 YLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR------ 166
Query: 249 YAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
++ PE + ++KSD+++FGV++ E+ S
Sbjct: 167 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 38/249 (15%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
LG G FG V G W ++ +A+K + + S+ E++ E K + L H
Sbjct: 23 LGTGQFGVVKYGKWRGQYD-----------VAIKMIKEGSMSED-EFIEEAKVMMNLSHE 70
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASY-IQPLSWTIRMKVALGAAKGLA 193
LV+L G C + ++ E+M G L N+L + Q L +++ + +
Sbjct: 71 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAME 125
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK----DGPTGSQ-SHVSTRVMGTYG 248
YL S + ++RD N L++ K+SDFGL++ D T S S R
Sbjct: 126 YLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR------ 177
Query: 249 YAAPEYMATGHLTAKSDVYSFGVVLLEMLS-GRRVIDK--NRPSREH--NLIEWAKPYLQ 303
++ PE + ++KSD+++FGV++ E+ S G+ ++ N + EH + +P+L
Sbjct: 178 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA 237
Query: 304 SKRRIFQVM 312
S+ +++ +M
Sbjct: 238 SE-KVYTIM 245
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 18/161 (11%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
L E + L + P LVKL + +D+ L +V E++P G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFY 146
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSH 238
++ L YLHS +IYRD K N+L+D K++DFG AK G T
Sbjct: 147 AAQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX--- 197
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 198 ----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 32/210 (15%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
LG G FG V G W ++ +A+K + + S+ E++ E K + L H
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-----------VAIKMIKEGSMSED-EFIEEAKVMMNLSHE 64
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASY-IQPLSWTIRMKVALGAAKGLA 193
LV+L G C + ++ E+M G L N+L + Q L +++ + +
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAME 119
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK----DGPTGSQ-SHVSTRVMGTYG 248
YL S + ++RD N L++ K+SDFGL++ D T S S R
Sbjct: 120 YLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR------ 171
Query: 249 YAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
++ PE + ++KSD+++FGV++ E+ S
Sbjct: 172 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 70 FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEIK 126
F LG G FG V + +H TG A+K L+++ L+ L E +
Sbjct: 44 FERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
L + P LVKL + +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 95 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIV 152
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTRV 243
L YLHS +IYRD K N+L+D +++DFG AK G T + +
Sbjct: 153 LT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT-------L 199
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GT Y APE + + D ++ GV++ EM +G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 118 HLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLS 177
H E EI L L HPN++KL + + LV EF G L +
Sbjct: 90 HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK--FDECD 147
Query: 178 WTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLN---YNAKLSDFGLAKDGPTG 234
MK L G+ YLH K +++RD K NILL+ N K+ DFGL+
Sbjct: 148 AANIMKQILS---GICYLH--KHNIVHRDIKPENILLENKNSLLNIKIVDFGLS---SFF 199
Query: 235 SQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
S+ + +GT Y APE + + K DV+S GV++ +L G
Sbjct: 200 SKDYKLRDRLGTAYYIAPEVLKKKY-NEKCDVWSCGVIMYILLCG 243
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 15/183 (8%)
Query: 105 IAVKRLNQESLQG---HLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHR----LLVYEFMP 157
+AVK L + + +L + E ++ L HP +V + + +V E++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVD 99
Query: 158 KGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLN 217
+L + + G P++ ++V A + L + H + +I+RD K +NI++
Sbjct: 100 GVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISAT 152
Query: 218 YNAKLSDFGLAKD-GPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEM 276
K+ DFG+A+ +G+ + V+GT Y +PE + A+SDVYS G VL E+
Sbjct: 153 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 277 LSG 279
L+G
Sbjct: 213 LTG 215
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+F+ +LGEG F V + A +R ++ + + +E+ ++ ++ +
Sbjct: 31 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV--M 84
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALG 187
+L HP VKL + +DD +L + G L ++ + G+ T
Sbjct: 85 SRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS-----FDETCTRFYTAE 138
Query: 188 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 247
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 139 IVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
Y +PE + SD+++ G ++ ++++G
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 70 FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEIK 126
F LG G FG V + +H TG A+K L+++ L+ L E +
Sbjct: 43 FERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
L + P LVKL + +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 94 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFXEPHARFYAAQIV 151
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTRV 243
L YLHS +IYRD K N+L+D +++DFG AK G T +
Sbjct: 152 LT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-------L 198
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GT Y APE + + D ++ GV++ EM +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+F+ +LGEG F V + A +R ++ + + +E+ ++ ++ +
Sbjct: 31 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV--M 84
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALG 187
+L HP VKL + +DD +L + G L ++ + G+ T
Sbjct: 85 SRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS-----FDETCTRFYTAE 138
Query: 188 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 247
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 139 IVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
Y +PE + SD+++ G ++ ++++G
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 17/213 (7%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT-EIKH 127
+F+ +LGEG F V + A +R ++ + + +E+ + ++T E
Sbjct: 33 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 85
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
+ +L HP VKL + +DD +L + G L ++ + G+ T
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS-----FDETCTRFYTA 139
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 140 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 247 YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
Y +PE + SD+++ G ++ ++++G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 17/213 (7%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT-EIKH 127
+F+ +LGEG F V + A +R ++ + + +E+ + ++T E
Sbjct: 33 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 85
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
+ +L HP VKL + +DD +L + G L ++ + G+ T
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS-----FDETCTRFYTA 139
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 140 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 247 YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
Y +PE + SD+++ G ++ ++++G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 17/213 (7%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT-EIKH 127
+F+ +LGEG F V + A +R ++ + + +E+ + ++T E
Sbjct: 34 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 86
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
+ +L HP VKL + +DD +L + G L ++ + G+ T
Sbjct: 87 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS-----FDETCTRFYTA 140
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 141 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 247 YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
Y +PE + SD+++ G ++ ++++G
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 17/213 (7%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT-EIKH 127
+F+ +LGEG F V + A +R ++ + + +E+ + ++T E
Sbjct: 33 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 85
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
+ +L HP VKL + +DD +L + G L ++ + G+ T
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS-----FDETCTRFYTA 139
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 140 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 247 YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
Y +PE + SD+++ G ++ ++++G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+F+ +LGEG F V + A +R ++ + + +E+ ++ ++ +
Sbjct: 34 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV--M 87
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALG 187
+L HP VKL + +DD +L + G L ++ + G+ T
Sbjct: 88 SRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS-----FDETCTRFYTAE 141
Query: 188 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 247
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 142 IVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 199
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
Y +PE + SD+++ G ++ ++++G
Sbjct: 200 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 15/183 (8%)
Query: 105 IAVKRLNQESLQG---HLEWLTEIKHLGQLYHPNLVKL--IGYCLEDDHRL--LVYEFMP 157
+AVK L + + +L + E ++ L HP +V + G L +V E++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 158 KGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLN 217
+L + + G P++ ++V A + L + H + +I+RD K +NI++
Sbjct: 100 GVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISAT 152
Query: 218 YNAKLSDFGLAKD-GPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEM 276
K+ DFG+A+ +G+ + V+GT Y +PE + A+SDVYS G VL E+
Sbjct: 153 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 277 LSG 279
L+G
Sbjct: 213 LTG 215
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 70 FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEIK 126
F LG G FG V + +H TG A+K L+++ L+ L E +
Sbjct: 43 FERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
L + P LVKL + +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 94 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFXEPHARFYAAQIV 151
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTRV 243
L YLHS +IYRD K N+L+D +++DFG AK G T +
Sbjct: 152 LT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-------L 198
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GT Y APE + + D ++ GV++ EM +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 70 FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH-- 127
F LG G FG V + +H TG A+K L+++ + L EI+H
Sbjct: 43 FERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVK----LKEIEHTL 89
Query: 128 -----LGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIR 181
L + P LVKL + +D+ L +V E+ P G + +HL R G + +P +
Sbjct: 90 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIG-RFSEPHARFYA 147
Query: 182 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHV 239
++ L YLHS +IYRD K N+++D +++DFGLAK G T
Sbjct: 148 AQIVLT----FEYLHS--LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWX---- 197
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 15/183 (8%)
Query: 105 IAVKRLNQESLQG---HLEWLTEIKHLGQLYHPNLVKL--IGYCLEDDHRL--LVYEFMP 157
+AVK L + + +L + E ++ L HP +V + G L +V E++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 158 KGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLN 217
+L + + G P++ ++V A + L + H + +I+RD K +NI++
Sbjct: 100 GVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISAT 152
Query: 218 YNAKLSDFGLAKD-GPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEM 276
K+ DFG+A+ +G+ + V+GT Y +PE + A+SDVYS G VL E+
Sbjct: 153 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 277 LSG 279
L+G
Sbjct: 213 LTG 215
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARP-GTGMVIAVKRLNQESL--QGHLEWLT-E 124
+F+ +LGEG F V AR T A+K L + + + + ++T E
Sbjct: 15 DFKFGKILGEGSFSTV----------VLARELATSREYAIKILEKRHIIKENKVPYVTRE 64
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
+ +L HP VKL + +DD +L + G L ++ + G+ T
Sbjct: 65 RDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS-----FDETCTRF 118
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
L YLH +I+RD K NILL+ + + +++DFG AK S+ +
Sbjct: 119 YTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 176
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+GT Y +PE + SD+++ G ++ ++++G
Sbjct: 177 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+F+ +LGEG F V + A +R ++ + + +E+ ++ ++ +
Sbjct: 33 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV--M 86
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALG 187
+L HP VKL + +DD +L + G L ++ + G+ T
Sbjct: 87 SRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS-----FDETCTRFYTAE 140
Query: 188 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 247
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 141 IVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
Y +PE + SD+++ G ++ ++++G
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 30/217 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 43 QFERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKV 184
+ L + P LVKL + +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 94 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFXEPHARFYAAQI 151
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTR 242
L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 152 VLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------- 198
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+F+ +LGEG F V + A +R ++ + + +E+ ++ ++ +
Sbjct: 31 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV--M 84
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALG 187
+L HP VKL + +DD +L + G L ++ + G+ T
Sbjct: 85 SRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS-----FDETCTRFYTAE 138
Query: 188 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 247
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 139 IVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTA 196
Query: 248 GYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
Y +PE + SD+++ G ++ ++++G
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 17/213 (7%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT-EIKH 127
+F+ +LGEG F V + A +R ++ + + +E+ + ++T E
Sbjct: 33 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 85
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
+ +L HP VKL + +DD +L + G L ++ + G+ T
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS-----FDETCTRFYTA 139
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 140 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 247 YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
Y +PE + SD+++ G ++ ++++G
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 17/213 (7%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT-EIKH 127
+F+ +LGEG F V + A +R ++ + + +E+ + ++T E
Sbjct: 36 DFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDV 88
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
+ +L HP VKL + +DD +L + G L ++ + G+ T
Sbjct: 89 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS-----FDETCTRFYTA 142
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 143 EIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 247 YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
Y +PE + SD+++ G ++ ++++G
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 102/234 (43%), Gaps = 43/234 (18%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N + ++G G +G V+KG +DE RP +AVK + + Q + I +
Sbjct: 14 NLKLLELIGRGRYGAVYKGSLDE------RP-----VAVKVFSFANRQNFIN-EKNIYRV 61
Query: 129 GQLYHPNLVKLI--GYCLEDDHR---LLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
+ H N+ + I + D R LLV E+ P GSL +L + W +
Sbjct: 62 PLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL------SLHTSDWVSSCR 115
Query: 184 VALGAAKGLAYLHSD-------KAKVIYRDFKTSNILLDLNYNAKLSDFGLA------KD 230
+A +GLAYLH++ K + +RD + N+L+ + +SDFGL+ +
Sbjct: 116 LAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRL 175
Query: 231 GPTGSQSHVSTRVMGTYGYAAPEYMATG-------HLTAKSDVYSFGVVLLEML 277
G + + + +GT Y APE + + D+Y+ G++ E+
Sbjct: 176 VRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 79 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ V+
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVA 184
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 74/155 (47%), Gaps = 23/155 (14%)
Query: 134 PNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSW----TIRMKVALGA 188
P +V+L Y +DD L +V E+MP G L N + ++Y P W T + +AL A
Sbjct: 129 PWVVQLF-YAFQDDRYLYMVMEYMPGGDLVNLM----SNYDVPEKWARFYTAEVVLALDA 183
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYG 248
+ ++H RD K N+LLD + + KL+DFG T V GT
Sbjct: 184 IHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPD 234
Query: 249 YAAPEYMAT----GHLTAKSDVYSFGVVLLEMLSG 279
Y +PE + + G+ + D +S GV L EML G
Sbjct: 235 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 100/216 (46%), Gaps = 30/216 (13%)
Query: 70 FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEIK 126
F LG G FG V + +H TG A+K L+++ L+ L E +
Sbjct: 43 FERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
L + P LVKL + +D+ L +V E+ P G + +HL R G + +P + ++
Sbjct: 94 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIG-RFXEPHARFYAAQIV 151
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTRV 243
L YLHS +IYRD K N+++D K++DFG AK G T +
Sbjct: 152 LT----FEYLHS--LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX-------L 198
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GT Y APE + + D ++ GV++ EM +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 15/183 (8%)
Query: 105 IAVKRLNQESLQG---HLEWLTEIKHLGQLYHPNLVKL--IGYCLEDDHRL--LVYEFMP 157
+AVK L + + +L + E ++ L HP +V + G L +V E++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 158 KGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLN 217
+L + + G P++ ++V A + L + H + +I+RD K +NI++
Sbjct: 100 GVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISAT 152
Query: 218 YNAKLSDFGLAKD-GPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEM 276
K+ DFG+A+ +G+ + V+GT Y +PE + A+SDVYS G VL E+
Sbjct: 153 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 277 LSG 279
L+G
Sbjct: 213 LTG 215
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 30/226 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 28 QFERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 78
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKV 184
+ L + P LVKL + +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 79 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQI 136
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTR 242
L YLHS +IYRD K N+L+D +++DFG AK G T +
Sbjct: 137 VLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT------- 183
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRP 288
+ GT Y APE + + D ++ GV++ EM +G ++P
Sbjct: 184 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 229
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARP-GTGMVIAVKRLNQESL--QGHLEWLT-E 124
+F+ +LGEG F V AR T A+K L + + + + ++T E
Sbjct: 30 DFKFGKILGEGSFSTV----------VLARELATSREYAIKILEKRHIIKENKVPYVTRE 79
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
+ +L HP VKL + +DD +L + G L ++ + G+ T
Sbjct: 80 RDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS-----FDETCTRF 133
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
L YLH +I+RD K NILL+ + + +++DFG AK S+ +
Sbjct: 134 YTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 191
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+GT Y +PE + SD+++ G ++ ++++G
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 21/215 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL--QGHLEWLT-EI 125
+F+ +LGEG F T T A+K L + + + + ++T E
Sbjct: 31 DFKFGKILGEGSFST---------TVLARELATSREYAIKILEKRHIIKENKVPYVTRER 81
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQPLSWTIRMKV 184
+ +L HP VKL + +DD +L + G L ++ + G+ T
Sbjct: 82 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS-----FDETCTRFY 135
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 244
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +
Sbjct: 136 TAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 245 GTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GT Y +PE + SD+++ G ++ ++++G
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 23/216 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARP-GTGMVIAVKRLNQESL--QGHLEWLT-E 124
+F+ +LGEG F V AR T A+K L + + + + ++T E
Sbjct: 30 DFKFGKILGEGSFSTV----------VLARELATSREYAIKILEKRHIIKENKVPYVTRE 79
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
+ +L HP VKL + +DD +L + G L ++ + G+ T
Sbjct: 80 RDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS-----FDETCTRF 133
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
L YLH +I+RD K NILL+ + + +++DFG AK S+ +
Sbjct: 134 YTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 191
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+GT Y +PE + SD+++ G ++ ++++G
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 31/213 (14%)
Query: 75 VLGEGGFGCVFK--GWIDEHTYAPARPGTGMVIAVKRLNQESLQGH--LEWLTEIKHLGQ 130
+LG+G FG V K I + YA VK +N+ S + L E++ L +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYA-----------VKVINKASAKNKDTSTILREVELLKK 77
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAK 190
L HPN++KL + +V E G L + + + + S ++
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFS 132
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLD---LNYNAKLSDFGLAKDGPTGSQSHVSTR-VMGT 246
G+ Y+H K +++RD K NILL+ + + K+ DFGL+ T Q + + +GT
Sbjct: 133 GITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS----TCFQQNTKMKDRIGT 186
Query: 247 YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
Y APE + G K DV+S GV+L +LSG
Sbjct: 187 AYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 30/217 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 35 QFERIKTLGTGSFGRVM---LVKHK------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 85
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKV 184
+ L + P LVKL + +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 86 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFXEPHARFYAAQI 143
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTR 242
L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 144 VLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------- 190
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 191 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 31/213 (14%)
Query: 75 VLGEGGFGCVFK--GWIDEHTYAPARPGTGMVIAVKRLNQESLQGH--LEWLTEIKHLGQ 130
+LG+G FG V K I + YA VK +N+ S + L E++ L +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYA-----------VKVINKASAKNKDTSTILREVELLKK 77
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAK 190
L HPN++KL + +V E G L + + + + S ++
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFS 132
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLD---LNYNAKLSDFGLAKDGPTGSQSHVSTR-VMGT 246
G+ Y+H K +++RD K NILL+ + + K+ DFGL+ T Q + + +GT
Sbjct: 133 GITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS----TCFQQNTKMKDRIGT 186
Query: 247 YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
Y APE + G K DV+S GV+L +LSG
Sbjct: 187 AYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 79 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ D+GLA+ +V+
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVA 184
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 70 FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEIK 126
F LG G FG V + +H TG A+K L+++ L+ L E +
Sbjct: 43 FERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
L + P LVKL + +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 94 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIV 151
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTRV 243
L YLHS +IYRD K N+L+D +++DFG AK G T +
Sbjct: 152 LT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-------L 198
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GT Y APE + + D ++ GV++ EM +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 74/155 (47%), Gaps = 23/155 (14%)
Query: 134 PNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSW----TIRMKVALGA 188
P +V+L Y +DD L +V E+MP G L N + ++Y P W T + +AL A
Sbjct: 134 PWVVQLF-YAFQDDRYLYMVMEYMPGGDLVNLM----SNYDVPEKWARFYTAEVVLALDA 188
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYG 248
+ ++H RD K N+LLD + + KL+DFG T V GT
Sbjct: 189 IHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPD 239
Query: 249 YAAPEYMAT----GHLTAKSDVYSFGVVLLEMLSG 279
Y +PE + + G+ + D +S GV L EML G
Sbjct: 240 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 129/355 (36%), Gaps = 97/355 (27%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIKHLGQL-YH 133
LG G FG V I+ + + T +AVK L + + H ++E+K L + +H
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 134 PNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHL----------------FRTGASYIQPL 176
N+V L+G C + L+V EF G+L +L FR G Y+ +
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAI 152
Query: 177 SWTIRMKV---------------------------------------------ALGAAKG 191
++ ++ + AKG
Sbjct: 153 PVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKG 212
Query: 192 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 251
+ +L S K I+RD NILL K+ DFGLA+D + A
Sbjct: 213 MEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 270
Query: 252 PEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSK------ 305
PE + T +SDV+SFGV+L E+ S A PY K
Sbjct: 271 PETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASPYPGVKIDEEFC 313
Query: 306 RRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDTN 360
RR+ + R Y+ +T + C EP RPT E+V+ L + N
Sbjct: 314 RRLKEGTRMRAP-DYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLGNLLQAN 364
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 74/155 (47%), Gaps = 23/155 (14%)
Query: 134 PNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSW----TIRMKVALGA 188
P +V+L Y +DD L +V E+MP G L N + ++Y P W T + +AL A
Sbjct: 134 PWVVQLF-YAFQDDRYLYMVMEYMPGGDLVNLM----SNYDVPEKWARFYTAEVVLALDA 188
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYG 248
+ ++H RD K N+LLD + + KL+DFG T V GT
Sbjct: 189 IHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPD 239
Query: 249 YAAPEYMAT----GHLTAKSDVYSFGVVLLEMLSG 279
Y +PE + + G+ + D +S GV L EML G
Sbjct: 240 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 70 FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEIK 126
F LG G FG V + +H TG A+K L+++ L+ L E +
Sbjct: 43 FERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
L + P LVKL + +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 94 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIV 151
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTRV 243
L YLHS +IYRD K N+L+D +++DFG AK G T +
Sbjct: 152 LT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-------L 198
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GT Y APE + + D ++ GV++ EM +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 30/217 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 42 QFERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKV 184
+ L + P LVKL + +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQI 150
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTR 242
L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 151 VLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------- 197
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 30/217 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 43 QFERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKV 184
+ L + P LVKL + +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 94 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQI 151
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTR 242
L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 152 VLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------- 198
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 20/206 (9%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+GEG FG K + + T G VI +++ S + E E+ L + HPN
Sbjct: 32 IGEGSFG---KAILVKST----EDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPN 84
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQP---LSWTIRMKVALGAAKGL 192
+V+ E+ +V ++ G L + Q L W +++ +AL
Sbjct: 85 IVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK----- 139
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAP 252
H K+++RD K+ NI L + +L DFG+A+ S ++ +GT Y +P
Sbjct: 140 ---HVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIAR--VLNSTVELARACIGTPYYLSP 194
Query: 253 EYMATGHLTAKSDVYSFGVVLLEMLS 278
E KSD+++ G VL E+ +
Sbjct: 195 EICENKPYNNKSDIWALGCVLYELCT 220
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 104/226 (46%), Gaps = 30/226 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 63 QFERIKTLGTGSFGRVM---LVKHK------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 113
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKV 184
+ L + P LVKL + +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 114 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQI 171
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTR 242
L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 172 VLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------- 218
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRP 288
+ GT Y APE + + D ++ GV++ EM +G ++P
Sbjct: 219 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 79 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 15/183 (8%)
Query: 105 IAVKRLNQESLQG---HLEWLTEIKHLGQLYHPNLVKL--IGYCLEDDHRL--LVYEFMP 157
+AVK L + + +L + E ++ L HP +V + G L +V E++
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 116
Query: 158 KGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLN 217
+L + + G P++ ++V A + L + H + +I+RD K +NI++
Sbjct: 117 GVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISAT 169
Query: 218 YNAKLSDFGLAKD-GPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEM 276
K+ DFG+A+ +G+ + V+GT Y +PE + A+SDVYS G VL E+
Sbjct: 170 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 229
Query: 277 LSG 279
L+G
Sbjct: 230 LTG 232
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 31/225 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL--- 122
AT + P + +G G +G V+K P +G +A+K + + G L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGGGGGGGLPIS 57
Query: 123 -----TEIKHLGQLYHPNLVKLIGYCLED--DHRL---LVYEFMPKGSLENHLFRTGASY 172
++ L HPN+V+L+ C D + LV+E + + L +L +
Sbjct: 58 TVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPG 116
Query: 173 IQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGP 232
+ + M+ L +GL +LH++ +++RD K NIL+ KL+DFGLA+
Sbjct: 117 LPAETIKDLMRQFL---RGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLAR--- 168
Query: 233 TGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEML 277
S T V+ T Y APE + D++S G + EM
Sbjct: 169 IYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN----QESLQ-GHLE 120
AT + P + +G G +G V+K P +G +A+K + +E L +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCL--EDDHRL---LVYEFMPKGSLENHLFRTGASYIQP 175
+ ++ L HPN+V+L+ C D + LV+E + + L +L + +
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
+ M+ L +GL +LH++ +++RD K NIL+ KL+DFGLA+ S
Sbjct: 112 ETIKDLMRQFL---RGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLAR---IYS 163
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEML 277
V+ T Y APE + D++S G + EM
Sbjct: 164 YQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 30/217 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 43 QFERIKTLGTGSFGRVM---LVKHK------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKV 184
+ L + P LVKL + +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 94 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQI 151
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTR 242
L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 152 VLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------- 198
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 30/217 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 43 QFERIKTLGTGSFGRVM---LVKHK------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKV 184
+ L + P LVKL + +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 94 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQI 151
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTR 242
L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 152 VLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------- 198
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 79 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDH 126
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGL + +V+
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVA 184
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 30/217 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 43 QFERIKTLGTGSFGRVM---LVKHK------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKV 184
+ L + P LVKL + +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 94 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQI 151
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTR 242
L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 152 VLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------- 198
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 100/216 (46%), Gaps = 30/216 (13%)
Query: 70 FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEIK 126
F LG G FG V + +H TG A+K L+++ L+ L E +
Sbjct: 43 FERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
L + P LVKL + +D+ L +V E+ P G + +HL R G + +P + ++
Sbjct: 94 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIG-RFSEPHARFYAAQIV 151
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTRV 243
L YLHS +IYRD K N+++D K++DFG AK G T +
Sbjct: 152 LT----FEYLHS--LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX-------L 198
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GT Y APE + + D ++ GV++ EM +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG +AVK+L++ +S+ E++ L +
Sbjct: 48 SPVGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 99 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 146
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 147 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 204
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 205 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG +AVK+L++ +S+ E++ L +
Sbjct: 24 SPVGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHL--FRTGASYIQPLSWTIRMKV 184
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQI---- 130
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 244
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 131 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 182
Query: 245 GTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
Y APE M H D++S G ++ E+L+GR
Sbjct: 183 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 129/355 (36%), Gaps = 97/355 (27%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIKHLGQL-YH 133
LG G FG V I+ + + T +AVK L + + H ++E+K L + +H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 134 PNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHL----------------FRTGASYIQPL 176
N+V L+G C + L+V EF G+L +L FR G Y+ +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAI 150
Query: 177 SWTIRMKV---------------------------------------------ALGAAKG 191
++ ++ + AKG
Sbjct: 151 PVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKG 210
Query: 192 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 251
+ +L S K I+RD NILL K+ DFGLA+D + A
Sbjct: 211 MEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 268
Query: 252 PEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSK------ 305
PE + T +SDV+SFGV+L E+ S A PY K
Sbjct: 269 PETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASPYPGVKIDEEFC 311
Query: 306 RRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDTN 360
RR+ + R Y+ +T + C EP RPT E+V+ L + N
Sbjct: 312 RRLKEGTRMRAP-DYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLGNLLQAN 362
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 129/355 (36%), Gaps = 97/355 (27%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIKHLGQL-YH 133
LG G FG V I+ + + T +AVK L + + H ++E+K L + +H
Sbjct: 28 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 83
Query: 134 PNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHL----------------FRTGASYIQPL 176
N+V L+G C + L+V EF G+L +L FR G Y+ +
Sbjct: 84 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAI 143
Query: 177 SWTIRMKV---------------------------------------------ALGAAKG 191
++ ++ + AKG
Sbjct: 144 PVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKG 203
Query: 192 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 251
+ +L S K I+RD NILL K+ DFGLA+D + A
Sbjct: 204 MEFLASRKC--IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 261
Query: 252 PEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSK------ 305
PE + T +SDV+SFGV+L E+ S A PY K
Sbjct: 262 PETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASPYPGVKIDEEFC 304
Query: 306 RRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDTN 360
RR+ + R Y+ +T + C EP RPT E+V+ L + N
Sbjct: 305 RRLKEGTRMRAP-DYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLGNLLQAN 355
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 42/224 (18%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG +AVK+L++ +S+ E++ L +
Sbjct: 34 SPVGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 85 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 132
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 133 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 190
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGRRVI 283
TR Y APE M H D++S G ++ E+L+GR +
Sbjct: 191 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 30/226 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 43 QFERIKTLGTGSFGRVM---LVKHK------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKV 184
+ L + P LVKL + +D+ L +V E+ P G + +HL R G + +P + ++
Sbjct: 94 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIG-RFSEPHARFYAAQI 151
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTR 242
L YLHS +IYRD K N+++D K++DFG AK G T
Sbjct: 152 VLT----FEYLHS--LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX------- 198
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRP 288
+ GT Y APE + + D ++ GV++ EM +G ++P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG +AVK+L++ +S+ E++ L +
Sbjct: 47 SPVGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 97
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 98 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 145
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 146 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 203
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 204 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 30/217 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 35 QFERIKTLGTGSFGRVM---LVKHK------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 85
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKV 184
+ L + P LVKL + +D+ L +V E++P G + +HL R G + +P + ++
Sbjct: 86 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQI 143
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTR 242
L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 144 VLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------- 190
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 191 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG +AVK+L++ +S+ E++ L +
Sbjct: 24 SPVGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 75 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 122
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+
Sbjct: 123 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 180
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 181 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 91/213 (42%), Gaps = 30/213 (14%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH------- 127
V+G+G FG V + H + AVK L ++++ E KH
Sbjct: 45 VIGKGSFGKVL---LARHK------AEEVFYAVKVLQKKAILKK----KEEKHIMSERNV 91
Query: 128 -LGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
L + HP LV L D V +++ G L HL R +++P + ++A
Sbjct: 92 LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERC-FLEPRARFYAAEIA- 149
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
L YLHS ++YRD K NILLD + L+DFGL K+ + ++ GT
Sbjct: 150 ---SALGYLHS--LNIVYRDLKPENILLDSQGHIVLTDFGLCKEN--IEHNSTTSTFCGT 202
Query: 247 YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
Y APE + D + G VL EML G
Sbjct: 203 PEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 129/355 (36%), Gaps = 97/355 (27%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIKHLGQL-YH 133
LG G FG V I+ + + T +AVK L + + H ++E+K L + +H
Sbjct: 30 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 85
Query: 134 PNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHL----------------FRTGASYIQPL 176
N+V L+G C + L+V EF G+L +L FR G Y+ +
Sbjct: 86 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAI 145
Query: 177 SWTIRMKV---------------------------------------------ALGAAKG 191
++ ++ + AKG
Sbjct: 146 PVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKG 205
Query: 192 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 251
+ +L S K I+RD NILL K+ DFGLA+D + A
Sbjct: 206 MEFLASRKC--IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 263
Query: 252 PEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSK------ 305
PE + T +SDV+SFGV+L E+ S A PY K
Sbjct: 264 PETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASPYPGVKIDEEFC 306
Query: 306 RRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDTN 360
RR+ + R Y+ +T + C EP RPT E+V+ L + N
Sbjct: 307 RRLKEGTRMRAP-DYTTPEMYQT---MLDCWHGEPSQRPTFSELVEHLGNLLQAN 357
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 96/219 (43%), Gaps = 42/219 (19%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQLYH 133
+G G +G V + TG +AVK+L++ +S+ E++ L + H
Sbjct: 40 VGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 90
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTIRM 182
N++ L+ F P SLE HL + I Q L+
Sbjct: 91 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 138
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 139 FLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 196
Query: 243 VMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
Y APE M H D++S G ++ E+L+GR
Sbjct: 197 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN----QESLQ-GHLE 120
AT + P + +G G +G V+K P +G +A+K + +E L +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCL--EDDHRL---LVYEFMPKGSLENHLFRTGASYIQP 175
+ ++ L HPN+V+L+ C D + LV+E + + L +L + +
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
+ M+ L +GL +LH++ +++RD K NIL+ KL+DFGLA+ S
Sbjct: 112 ETIKDLMRQFL---RGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLAR---IYS 163
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEML 277
V+ T Y APE + D++S G + EM
Sbjct: 164 YQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 10/188 (5%)
Query: 98 RPGTGMVIAVKRLNQESL-QGHLEWL-TEIKHLGQLYHPNLVKLIGYCLEDDHRLL--VY 153
R G ++ K L+ S+ + + L +E+ L +L HPN+V+ ++ + L V
Sbjct: 27 RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86
Query: 154 EFMPKGSLENHLFRTGASYIQPL--SWTIRMKVALGAAKGLAYLHSDKA-KVIYRDFKTS 210
E+ G L + + G Q L + +R+ L A + SD V++RD K +
Sbjct: 87 EYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPA 145
Query: 211 NILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFG 270
N+ LD N KL DFGLA+ + +GT Y +PE M KSD++S G
Sbjct: 146 NVFLDGKQNVKLGDFGLAR--ILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLG 203
Query: 271 VVLLEMLS 278
+L E+ +
Sbjct: 204 CLLYELCA 211
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKR--LNQESLQGHLEWLTEIKHLGQLYH 133
+GEG +G VFK E T ++A+KR L+ + L EI L +L H
Sbjct: 10 IGEGTYGTVFKAKNRE---------THEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
N+V+L D LV+EF + L + S L I KGL
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFC-----DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLG 115
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 253
+ HS V++RD K N+L++ N KL+DFGLA+ + + + V T Y P+
Sbjct: 116 FCHS--RNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--TLWYRPPD 171
Query: 254 YMATGHLTAKS-DVYSFGVVLLEMLSGRR 281
+ L + S D++S G + E+ + R
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAAR 200
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 10/188 (5%)
Query: 98 RPGTGMVIAVKRLNQESL-QGHLEWL-TEIKHLGQLYHPNLVKLIGYCLEDDHRLL--VY 153
R G ++ K L+ S+ + + L +E+ L +L HPN+V+ ++ + L V
Sbjct: 27 RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86
Query: 154 EFMPKGSLENHLFRTGASYIQPL--SWTIRMKVALGAAKGLAYLHSDKA-KVIYRDFKTS 210
E+ G L + + G Q L + +R+ L A + SD V++RD K +
Sbjct: 87 EYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPA 145
Query: 211 NILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFG 270
N+ LD N KL DFGLA+ + + +GT Y +PE M KSD++S G
Sbjct: 146 NVFLDGKQNVKLGDFGLAR--ILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLG 203
Query: 271 VVLLEMLS 278
+L E+ +
Sbjct: 204 CLLYELCA 211
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 10/188 (5%)
Query: 98 RPGTGMVIAVKRLNQESL-QGHLEWL-TEIKHLGQLYHPNLVKLIGYCLEDDHRLL--VY 153
R G ++ K L+ S+ + + L +E+ L +L HPN+V+ ++ + L V
Sbjct: 27 RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86
Query: 154 EFMPKGSLENHLFRTGASYIQPL--SWTIRMKVALGAAKGLAYLHSDKA-KVIYRDFKTS 210
E+ G L + + G Q L + +R+ L A + SD V++RD K +
Sbjct: 87 EYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPA 145
Query: 211 NILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFG 270
N+ LD N KL DFGLA+ + + +GT Y +PE M KSD++S G
Sbjct: 146 NVFLDGKQNVKLGDFGLAR--ILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLG 203
Query: 271 VVLLEMLS 278
+L E+ +
Sbjct: 204 CLLYELCA 211
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 33/230 (14%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L H ++V G+ ++D +V E + SL L + + +P + +
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ 147
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA-KDGPTGSQSHVSTR 242
+ LG YLH ++ VI+RD K N+ L+ + K+ DFGLA K G + V
Sbjct: 148 IVLGCQ----YLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--- 198
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYL 302
+ GT Y APE ++ + + DV+S G ++ +L G +P E + ++ YL
Sbjct: 199 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETSCLKET--YL 249
Query: 303 QSKRRIFQVMDARIEGQYSLGAALK--TAVLAIKCLSNEPKFRPTMDEVV 350
+ K+ +YS+ + A L K L +P RPT++E++
Sbjct: 250 RIKK-----------NEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 288
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN----QESLQ-GHLE 120
AT + P + +G G +G V+K P +G +A+K + +E L +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCL--EDDHRL---LVYEFMPKGSLENHLFRTGASYIQP 175
+ ++ L HPN+V+L+ C D + LV+E + + L +L + +
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 235
+ M+ L +GL +LH++ +++RD K NIL+ KL+DFGLA+ S
Sbjct: 112 ETIKDLMRQFL---RGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLAR---IYS 163
Query: 236 QSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEML 277
V+ T Y APE + D++S G + EM
Sbjct: 164 YQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 105/241 (43%), Gaps = 44/241 (18%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL 122
+T R +G+G +G V++G W G +AVK + Q W
Sbjct: 4 RTVARQVALVECVGKGRYGEVWRGLW------------HGESVAVKIFSSRDEQS---WF 48
Query: 123 --TEIKHLGQLYHPNLVKLIGYCL----EDDHRLLVYEFMPKGSLENHLFRTGASYIQPL 176
TEI + L H N++ I + L+ + GSL + L R Q L
Sbjct: 49 RETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQR------QTL 102
Query: 177 SWTIRMKVALGAAKGLAYLHSD------KAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 230
+ +++A+ AA GLA+LH + K + +RDFK+ N+L+ N ++D GLA
Sbjct: 103 EPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVM 162
Query: 231 GPTGSQ--SHVSTRVMGTYGYAAPEYMATGHLT------AKSDVYSFGVVLLEMLSGRRV 282
GS + +GT Y APE + T +D+++FG+VL E+ RR
Sbjct: 163 HSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRT 220
Query: 283 I 283
I
Sbjct: 221 I 221
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 33/230 (14%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L H ++V G+ ++D +V E + SL L + + +P + +
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ 149
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA-KDGPTGSQSHVSTR 242
+ LG YLH ++ VI+RD K N+ L+ + K+ DFGLA K G + V
Sbjct: 150 IVLGCQ----YLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--- 200
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYL 302
+ GT Y APE ++ + + DV+S G ++ +L G +P E + ++ YL
Sbjct: 201 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETSCLKET--YL 251
Query: 303 QSKRRIFQVMDARIEGQYSLGAALK--TAVLAIKCLSNEPKFRPTMDEVV 350
+ K+ +YS+ + A L K L +P RPT++E++
Sbjct: 252 RIKK-----------NEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 290
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 33/223 (14%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAK 190
L H ++V G+ ++D +V E + SL L + + +P + ++ LG
Sbjct: 72 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQ- 129
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA-KDGPTGSQSHVSTRVMGTYGY 249
YLH ++ VI+RD K N+ L+ + K+ DFGLA K G + V + GT Y
Sbjct: 130 ---YLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNY 181
Query: 250 AAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIF 309
APE ++ + + DV+S G ++ +L G +P E + ++ + YL+ K+
Sbjct: 182 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETSCLK--ETYLRIKK--- 229
Query: 310 QVMDARIEGQYSLGAALK--TAVLAIKCLSNEPKFRPTMDEVV 350
+YS+ + A L K L +P RPT++E++
Sbjct: 230 --------NEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 264
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL- 122
K NF VLG G +G VF + TG + A+K L + ++ +
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFL------VRKISGHDTGKLYAMKVLKKATIVQKAKTTE 103
Query: 123 ---TEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSW 178
TE + L + + + Y + + +L L+ +++ G L HL + +
Sbjct: 104 HTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQI 163
Query: 179 TIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH 238
+ V LA H K +IYRD K NILLD N + L+DFGL+K+ ++
Sbjct: 164 YVGEIV-------LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF-VADETE 215
Query: 239 VSTRVMGTYGYAAPEYM---ATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y AP+ + +GH A D +S GV++ E+L+G
Sbjct: 216 RAYDFCGTIEYMAPDIVRGGDSGHDKA-VDWWSLGVLMYELLTG 258
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 23/215 (10%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
+ F VLG G F VF + TG + A+K + + EI
Sbjct: 9 KTFIFMEVLGSGAFSEVF---------LVKQRLTGKLFALKCIKKSPAFRDSSLENEIAV 59
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALG 187
L ++ H N+V L H LV + + G L + + G + S I+ L
Sbjct: 60 LKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ--VLS 117
Query: 188 AAKGLAYLHSDKAKVIYRDFKTSNILL---DLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 244
A K YLH + +++RD K N+L + N ++DFGL+K Q+ + +
Sbjct: 118 AVK---YLHENG--IVHRDLKPENLLYLTPEENSKIMITDFGLSK----MEQNGIMSTAC 168
Query: 245 GTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GT GY APE +A + D +S GV+ +L G
Sbjct: 169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 79 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ V+
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVA 184
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 79 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ V+
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVA 184
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 103/234 (44%), Gaps = 42/234 (17%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL 122
+T R +G+G FG V++G W E +AVK + + W
Sbjct: 38 RTIARTIVLQESIGKGRFGEVWRGKWRGEE------------VAVKIFSSREERS---WF 82
Query: 123 --TEIKHLGQLYHPNLVKLIGYCLEDD----HRLLVYEFMPKGSLENHLFRTGASYIQPL 176
EI L H N++ I +D+ LV ++ GSL ++L R + ++ +
Sbjct: 83 REAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVT-VEGM 141
Query: 177 SWTIRMKVALGAAKGLAYLHSD------KAKVIYRDFKTSNILLDLNYNAKLSDFGLA-- 228
+K+AL A GLA+LH + K + +RD K+ NIL+ N ++D GLA
Sbjct: 142 -----IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 196
Query: 229 KDGPTGSQSHVSTRVMGTYGYAAPEYMATG----HLTA--KSDVYSFGVVLLEM 276
D T + +GT Y APE + H + ++D+Y+ G+V E+
Sbjct: 197 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG +AVK+L++ +S+ E++ L +
Sbjct: 48 SPVGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 99 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 146
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ V+
Sbjct: 147 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVA 204
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 205 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 74/149 (49%), Gaps = 18/149 (12%)
Query: 134 PNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGL 192
P LVKL + +D+ L +V E+ P G + +HL R G + +P + ++ L
Sbjct: 102 PFLVKL-EFSFKDNSNLYMVLEYAPGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----F 155
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTRVMGTYGYA 250
YLHS +IYRD K N+L+D K++DFG AK G T + GT Y
Sbjct: 156 EYLHS--LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX-------LCGTPEYL 206
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLSG 279
APE + + D ++ GV++ EM +G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 102/233 (43%), Gaps = 40/233 (17%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL- 122
+T R +G+G FG V++G G +AVK + + W
Sbjct: 25 RTIARTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSSREERS---WFR 70
Query: 123 -TEIKHLGQLYHPNLVKLIGYCLEDD----HRLLVYEFMPKGSLENHLFRTGASYIQPLS 177
EI L H N++ I +D+ LV ++ GSL ++L R + ++ +
Sbjct: 71 EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVT-VEGM- 128
Query: 178 WTIRMKVALGAAKGLAYLHSD------KAKVIYRDFKTSNILLDLNYNAKLSDFGLA--K 229
+K+AL A GLA+LH + K + +RD K+ NIL+ N ++D GLA
Sbjct: 129 ----IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 184
Query: 230 DGPTGSQSHVSTRVMGTYGYAAPEYMATG----HLTA--KSDVYSFGVVLLEM 276
D T + +GT Y APE + H + ++D+Y+ G+V E+
Sbjct: 185 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
+LG G FG V K E T TG+ +A K + ++ E EI + QL H
Sbjct: 96 ILGGGRFGQVHKC---EET------ATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHA 146
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASY-IQPLSWTIRMKVALGAAKGLA 193
NL++L + +LV E++ G L + + SY + L + MK +G+
Sbjct: 147 NLIQLYDAFESKNDIVLVMEYVDGGELFDRII--DESYNLTELDTILFMK---QICEGIR 201
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNA---KLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
++H + +++ D K NIL +N +A K+ DFGLA+ + V+ GT +
Sbjct: 202 HMH--QMYILHLDLKPENILC-VNRDAKQIKIIDFGLARRYKPREKLKVN---FGTPEFL 255
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLSG 279
APE + ++ +D++S GV+ +LSG
Sbjct: 256 APEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 70 FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEIK 126
F LG G FG V + +H TG A+K L+++ L+ L E +
Sbjct: 44 FERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
L + P L KL + +D+ L +V E+ P G + +HL R G + +P + ++
Sbjct: 95 ILQAVNFPFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIG-RFXEPHARFYAAQIV 152
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTRV 243
L YLHS +IYRD K N+++D K++DFG AK G T +
Sbjct: 153 LT----FEYLHS--LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX-------L 199
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GT Y APE + + D ++ GV++ EM +G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
K+ L K L +L + K+I+RD K SNILLD + N KL DFG++ S TR
Sbjct: 129 KITLATVKALNHLK-ENLKIIHRDIKPSNILLDRSGNIKLCDFGISG---QLVDSIAKTR 184
Query: 243 VMGTYGYAAPEYMATGH----LTAKSDVYSFGVVLLEMLSGR 280
G Y APE + +SDV+S G+ L E+ +GR
Sbjct: 185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 30/225 (13%)
Query: 70 FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEIK 126
F LG G FG V + +H TG A+K L+++ L+ L E +
Sbjct: 43 FERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
L + P LVKL + +D+ L +V E+ P G + +HL R G + +P + ++
Sbjct: 94 ILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIG-RFSEPHARFYAAQIV 151
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTRV 243
L YLHS +IYRD K N+++D +++DFG AK G T +
Sbjct: 152 LT----FEYLHS--LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWX-------L 198
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRP 288
GT Y APE + + D ++ GV++ EM +G ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 65 TATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL-- 122
T R +G+G FG V++G G +AVK + + W
Sbjct: 1 TIARTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSSREERS---WFRE 46
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDD----HRLLVYEFMPKGSLENHLFRTGASYIQPLSW 178
EI L H N++ I +D+ LV ++ GSL ++L R + ++ +
Sbjct: 47 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVT-VEGM-- 103
Query: 179 TIRMKVALGAAKGLAYLHSD------KAKVIYRDFKTSNILLDLNYNAKLSDFGLA--KD 230
+K+AL A GLA+LH + K + +RD K+ NIL+ N ++D GLA D
Sbjct: 104 ---IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 160
Query: 231 GPTGSQSHVSTRVMGTYGYAAPEYMATG----HLTA--KSDVYSFGVVLLEM 276
T + +GT Y APE + H + ++D+Y+ G+V E+
Sbjct: 161 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG +AVK+L++ +S+ E++ L +
Sbjct: 24 SPVGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 75 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 122
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ V+
Sbjct: 123 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVA 180
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 181 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 128/302 (42%), Gaps = 50/302 (16%)
Query: 63 LKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-----NQESLQG 117
++ + P LG G +G V ++ + P +G ++AVKR+ +QE +
Sbjct: 2 MEVKADDLEPIMELGRGAYGVV-----EKMRHVP----SGQIMAVKRIRATVNSQEQKRL 52
Query: 118 HLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLS 177
++ ++ + P V G + + E M SL+ ++ Q +
Sbjct: 53 LMDLDISMRTVD---CPFTVTFYGALFREGDVWICMELM-DTSLDK-FYKQVIDKGQTIP 107
Query: 178 WTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGL--------AK 229
I K+A+ K L +LHS K VI+RD K SN+L++ K+ DFG+ AK
Sbjct: 108 EDILGKIAVSIVKALEHLHS-KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAK 166
Query: 230 DGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPS 289
D G + +++ + PE G+ + KSD++S G+ ++E+ R D
Sbjct: 167 DIDAGCKPYMAPERIN------PELNQKGY-SVKSDIWSLGITMIELAILRFPYD----- 214
Query: 290 REHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEV 349
W P+ Q K+ + + ++S T+ +CL K RPT E+
Sbjct: 215 ------SWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTS----QCLKKNSKERPTYPEL 264
Query: 350 VK 351
++
Sbjct: 265 MQ 266
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 65 TATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL-- 122
T R +G+G FG V++G G +AVK + + W
Sbjct: 3 TIARTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSSREERS---WFRE 48
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDD----HRLLVYEFMPKGSLENHLFRTGASYIQPLSW 178
EI L H N++ I +D+ LV ++ GSL ++L R + ++ +
Sbjct: 49 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVT-VEGM-- 105
Query: 179 TIRMKVALGAAKGLAYLHSD------KAKVIYRDFKTSNILLDLNYNAKLSDFGLA--KD 230
+K+AL A GLA+LH + K + +RD K+ NIL+ N ++D GLA D
Sbjct: 106 ---IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 162
Query: 231 GPTGSQSHVSTRVMGTYGYAAPEYMATG----HLTA--KSDVYSFGVVLLEM 276
T + +GT Y APE + H + ++D+Y+ G+V E+
Sbjct: 163 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 23/221 (10%)
Query: 69 NFRPDSVLGEGGFG----CVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTE 124
N+ P +LG G C+ K E+ G + + + QE + L+ +
Sbjct: 5 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEV-QELREATLKEVDI 63
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKV 184
++ + HPN+++L + LV++ M KG L ++L LS K+
Sbjct: 64 LRKVSG--HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT-----LSEKETRKI 116
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 244
+ + LH K +++RD K NILLD + N KL+DFG + G + V
Sbjct: 117 MRALLEVICALH--KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVC 171
Query: 245 GTYGYAAPEY----MATGH--LTAKSDVYSFGVVLLEMLSG 279
GT Y APE M H + D++S GV++ +L+G
Sbjct: 172 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 31/229 (13%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L H ++V G+ ++D +V E + SL L + + +P + +
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ 125
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
+ LG YLH ++ VI+RD K N+ L+ + K+ DFGLA + + +
Sbjct: 126 IVLGCQ----YLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--L 177
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQ 303
GT Y APE ++ + + DV+S G ++ +L G +P E + ++ YL+
Sbjct: 178 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETSCLKET--YLR 228
Query: 304 SKRRIFQVMDARIEGQYSLGAALK--TAVLAIKCLSNEPKFRPTMDEVV 350
K+ +YS+ + A L K L +P RPT++E++
Sbjct: 229 IKK-----------NEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 23/221 (10%)
Query: 69 NFRPDSVLGEGGFG----CVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTE 124
N+ P +LG G C+ K E+ G + + + QE + L+ +
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEV-QELREATLKEVDI 76
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKV 184
++ + HPN+++L + LV++ M KG L ++L LS K+
Sbjct: 77 LRKVSG--HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT-----LSEKETRKI 129
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 244
+ + LH K +++RD K NILLD + N KL+DFG + G + V
Sbjct: 130 MRALLEVICALH--KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVC 184
Query: 245 GTYGYAAPEY----MATGH--LTAKSDVYSFGVVLLEMLSG 279
GT Y APE M H + D++S GV++ +L+G
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 31/229 (13%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L H ++V G+ ++D +V E + SL L + + +P + +
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ 129
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
+ LG YLH ++ VI+RD K N+ L+ + K+ DFGLA + + +
Sbjct: 130 IVLGCQ----YLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--L 181
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQ 303
GT Y APE ++ + + DV+S G ++ +L G +P E + ++ YL+
Sbjct: 182 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETSCLKET--YLR 232
Query: 304 SKRRIFQVMDARIEGQYSLGAALK--TAVLAIKCLSNEPKFRPTMDEVV 350
K+ +YS+ + A L K L +P RPT++E++
Sbjct: 233 IKK-----------NEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 270
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 47/234 (20%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE---WLTEIKHLGQLY 132
LG+G +G V+K ID T G V+AVK++ ++ Q + EI L +L
Sbjct: 17 LGKGAYGIVWKS-IDRRT--------GEVVAVKKI-FDAFQNSTDAQRTFREIMILTELS 66
Query: 133 -HPNLVKLIGYCLEDDHR--LLVYEFMPKGSLENHLFRT-GASYIQPLSWTIRMKVALGA 188
H N+V L+ D+ R LV+++M E L A+ ++P+ + V
Sbjct: 67 GHENIVNLLNVLRADNDRDVYLVFDYM-----ETDLHAVIRANILEPVH---KQYVVYQL 118
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK----------DGPTGSQSH 238
K + YLHS +++RD K SNILL+ + K++DFGL++ + P +
Sbjct: 119 IKVIKYLHS--GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINEN 176
Query: 239 ---------VSTRVMGTYGYAAPEY-MATGHLTAKSDVYSFGVVLLEMLSGRRV 282
+ T + T Y APE + + T D++S G +L E+L G+ +
Sbjct: 177 TENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPI 230
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 31/229 (13%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI L H ++V G+ ++D +V E + SL L + + +P + +
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ 125
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
+ LG YLH ++ VI+RD K N+ L+ + K+ DFGLA + + +
Sbjct: 126 IVLGCQ----YLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--L 177
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQ 303
GT Y APE ++ + + DV+S G ++ +L G +P E + ++ YL+
Sbjct: 178 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETSCLKET--YLR 228
Query: 304 SKRRIFQVMDARIEGQYSLGAALK--TAVLAIKCLSNEPKFRPTMDEVV 350
K+ +YS+ + A L K L +P RPT++E++
Sbjct: 229 IKK-----------NEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 9/158 (5%)
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRM 182
TEI L +P++V G+ +DD +V E + SL R A + +R
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ 150
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
+ +G+ YLH+++ VI+RD K N+ L+ + + K+ DFGLA +
Sbjct: 151 TI-----QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKX 201
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
+ GT Y APE + + + D++S G +L +L G+
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 9/158 (5%)
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRM 182
TEI L +P++V G+ +DD +V E + SL R A + +R
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ 150
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
+ +G+ YLH+++ VI+RD K N+ L+ + + K+ DFGLA + +
Sbjct: 151 TI-----QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-- 201
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
+ GT Y APE + + + D++S G +L +L G+
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 79 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ FGLA+ +V+
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVA 184
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 122/281 (43%), Gaps = 37/281 (13%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMV-IAVKRLNQESLQGHLEWLTEIKHLGQLYH 133
VLG+G +G V+ G R + V IA+K + + + EI L H
Sbjct: 29 VLGKGTYGIVYAG----------RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKH 78
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
N+V+ +G E+ + E +P GSL + L R+ ++ TI +GL
Sbjct: 79 KNIVQYLGSFSENGFIKIFMEQVPGGSL-SALLRSKWGPLKDNEQTIGFYTK-QILEGLK 136
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNA--KLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 251
YLH + ++++RD K N+L++ Y+ K+SDFG +K + + GT Y A
Sbjct: 137 YLHDN--QIVHRDIKGDNVLIN-TYSGVLKISDFGTSKR--LAGINPCTETFTGTLQYMA 191
Query: 252 PEYMATGH--LTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIF 309
PE + G +D++S G ++EM +G+ E +P + +F
Sbjct: 192 PEIIDKGPRGYGKAADIWSLGCTIIEMATGKP-----------PFYELGEP----QAAMF 236
Query: 310 QVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVV 350
+V ++ + + + +KC +P R ++++
Sbjct: 237 KVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLL 277
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 65 TATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL-- 122
T R +G+G FG V++G G +AVK + + W
Sbjct: 6 TIARTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSSREERS---WFRE 51
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDD----HRLLVYEFMPKGSLENHLFRTGASYIQPLSW 178
EI L H N++ I +D+ LV ++ GSL ++L R + ++ +
Sbjct: 52 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVT-VEGM-- 108
Query: 179 TIRMKVALGAAKGLAYLHSD------KAKVIYRDFKTSNILLDLNYNAKLSDFGLA--KD 230
+K+AL A GLA+LH + K + +RD K+ NIL+ N ++D GLA D
Sbjct: 109 ---IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 165
Query: 231 GPTGSQSHVSTRVMGTYGYAAPEYMATG----HLTA--KSDVYSFGVVLLEM 276
T + +GT Y APE + H + ++D+Y+ G+V E+
Sbjct: 166 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 70 FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEIK 126
F LG G FG V + +H TG A+K L+++ L+ L E +
Sbjct: 44 FERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
L + P L KL + +D+ L +V E+ P G + +HL R G + +P + ++
Sbjct: 95 ILQAVNFPFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIG-RFSEPHARFYAAQIV 152
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTRV 243
L YLHS +IYRD K N+++D K++DFG AK G T +
Sbjct: 153 LT----FEYLHS--LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX-------L 199
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GT Y APE + + D ++ GV++ EM +G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 79 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ D GLA+ +V+
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVA 184
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 70 FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEIK 126
F LG G FG V + +H TG A+K L+++ L+ L E +
Sbjct: 44 FERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVA 185
L + P L KL + +D+ L +V E+ P G + +HL R G + +P + ++
Sbjct: 95 ILQAVNFPFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIG-RFSEPHARFYAAQIV 152
Query: 186 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTRV 243
L YLHS +IYRD K N+++D K++DFG AK G T +
Sbjct: 153 LT----FEYLHS--LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX-------L 199
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GT Y APE + + D ++ GV++ EM +G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 104/230 (45%), Gaps = 31/230 (13%)
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRM 182
TEI L +P++V G+ +DD +V E + SL R A + +R
Sbjct: 75 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ 134
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
+ +G+ YLH+++ VI+RD K N+ L+ + + K+ DFGLA +
Sbjct: 135 TI-----QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKD 185
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYL 302
+ GT Y APE + + + D++S G +L +L G +P E + ++ Y+
Sbjct: 186 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG-------KPPFETSCLKET--YI 236
Query: 303 QSKRRIFQVMDARIEGQYSLGAALKTAVLAI--KCLSNEPKFRPTMDEVV 350
+ K+ +YS+ + A+ + L +P RP++ E++
Sbjct: 237 RIKK-----------NEYSVPRHINPVASALIRRMLHADPTLRPSVAELL 275
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 79 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ D GLA+ +V+
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVA 184
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 99/238 (41%), Gaps = 48/238 (20%)
Query: 69 NFRPDSVLGEGGFGCVFKG--WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIK 126
+F +VLG+G FG V K +D YA I R +E L L+E+
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYA---------IKKIRHTEEKLST---ILSEVX 54
Query: 127 HLGQLYHPNLVKLIGYCLEDDH-------------RLLVYEFMPKGSLENHLFRTGASYI 173
L L H +V+ LE + + E+ +L + + +
Sbjct: 55 LLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQ 114
Query: 174 QPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD--- 230
+ W + ++ + L+Y+HS +I+R+ K NI +D + N K+ DFGLAK+
Sbjct: 115 RDEYWRLFRQIL----EALSYIHSQG--IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHR 168
Query: 231 ----------GPTGSQSHVSTRVMGTYGYAAPEYM-ATGHLTAKSDVYSFGVVLLEML 277
GS ++ T +GT Y A E + TGH K D YS G++ E +
Sbjct: 169 SLDILKLDSQNLPGSSDNL-TSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 14/168 (8%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 110 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFY 167
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
++ L YLHS +IYRD K N+L+D +++DFG AK + +
Sbjct: 168 AAQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT--- 218
Query: 241 TRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRP 288
+ GT Y APE + + D ++ GV++ EM +G ++P
Sbjct: 219 --LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 29/188 (15%)
Query: 105 IAVKRLNQ--ESLQGHLEWLTEIKHLGQLYHPNLVKLI-----GYCLEDDHRL-LVYEFM 156
+AVK+L++ +SL E++ L L H N++ L+ +ED + LV M
Sbjct: 56 VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 115
Query: 157 PKGSLENHLFRTGA---SYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNIL 213
G+ N++ ++ A ++Q L + + +GL Y+HS A +I+RD K SN+
Sbjct: 116 --GADLNNIVKSQALSDEHVQFLVYQL--------LRGLKYIHS--AGIIHRDLKPSNVA 163
Query: 214 LDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVV 272
++ + ++ DFGLA+ +V+TR Y APE M H D++S G +
Sbjct: 164 VNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 273 LLEMLSGR 280
+ E+L G+
Sbjct: 219 MAELLQGK 226
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 50/237 (21%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMV-------------IAVKRLNQESL 115
++R L +G F + D YA + ++ I++K +
Sbjct: 32 DYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKS-KYDDF 90
Query: 116 QGHLEWLTEIKHLGQLYHPNLVKLIGYCL-------EDDHRLLVYEFMPKGSL---ENHL 165
+ L+ +T+IK+ YCL D ++YE+M S+ + +
Sbjct: 91 KNELQIITDIKN-------------EYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYF 137
Query: 166 FRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDF 225
F +Y + + + +Y+H++K + +RD K SNIL+D N KLSDF
Sbjct: 138 FVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK-NICHRDVKPSNILMDKNGRVKLSDF 196
Query: 226 GLAKDGPTGSQSHVSTRVM---GTYGYAAPEYMA--TGHLTAKSDVYSFGVVLLEML 277
G S+ V ++ GTY + PE+ + + + AK D++S G+ L M
Sbjct: 197 G-------ESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMF 246
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 9/158 (5%)
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRM 182
TEI L +P++V G+ +DD +V E + SL R A + +R
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ 150
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
+ +G+ YLH+++ VI+RD K N+ L+ + + K+ DFGLA +
Sbjct: 151 TI-----QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKD 201
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGR 280
+ GT Y APE + + + D++S G +L +L G+
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 23/221 (10%)
Query: 69 NFRPDSVLGEGGFG----CVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTE 124
N+ P +LG G C+ K E+ G + + + QE + L+ +
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEV-QELREATLKEVDI 76
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKV 184
++ + HPN+++L + LV++ M KG L ++L LS K+
Sbjct: 77 LRKVSG--HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT-----LSEKETRKI 129
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 244
+ + LH K +++RD K NILLD + N KL+DFG + G + V
Sbjct: 130 MRALLEVICALH--KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---SVC 184
Query: 245 GTYGYAAPEY----MATGH--LTAKSDVYSFGVVLLEMLSG 279
GT Y APE M H + D++S GV++ +L+G
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 124/293 (42%), Gaps = 44/293 (15%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-----NQESLQGHLEWLT 123
+ P LG G +G V ++ + P +G ++AVKR+ +QE + ++
Sbjct: 52 DLEPIMELGRGAYGVV-----EKMRHVP----SGQIMAVKRIRATVNSQEQKRLLMDLDI 102
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
++ + P V G + + E M SL+ ++ Q + I K
Sbjct: 103 SMRTVD---CPFTVTFYGALFREGDVWICMELM-DTSLDK-FYKQVIDKGQTIPEDILGK 157
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
+A+ K L +LHS K VI+RD K SN+L++ K+ DFG++ S T
Sbjct: 158 IAVSIVKALEHLHS-KLSVIHRDVKPSNVLINALGQVKMCDFGISG---YLVDSVAKTID 213
Query: 244 MGTYGYAAPEYM-----ATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWA 298
G Y APE + G+ + KSD++S G+ ++E+ R D W
Sbjct: 214 AGCKPYMAPERINPELNQKGY-SVKSDIWSLGITMIELAILRFPYD-----------SWG 261
Query: 299 KPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVK 351
P+ Q K+ + + ++S T+ +CL K RPT E+++
Sbjct: 262 TPFQQLKQVVEEPSPQLPADKFSAEFVDFTS----QCLKKNSKERPTYPELMQ 310
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 28/211 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGH-LEWLTEIKHLGQLYHP 134
LGEG + V+KG T ++A+K + E +G + E+ L L H
Sbjct: 10 LGEGTYATVYKG---------KSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK----VALGAAK 190
N+V L + LV+E++ K L+ +L G I M +
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGN--------IINMHNVKLFLFQLLR 111
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
GLAY H + KV++RD K N+L++ KL+DFGLA+ ++++ + V T Y
Sbjct: 112 GLAYCH--RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYR 167
Query: 251 APE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
P+ + + + + D++ G + EM +GR
Sbjct: 168 PPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 29/214 (13%)
Query: 76 LGEGGFG--CVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW---LTEIKHLGQ 130
+G+G FG C+ + + T + A+K +N++ E E++ +
Sbjct: 23 IGKGSFGKVCIVQ-----------KNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAK 190
L HP LV L +++ +V + + G L HL + T+++ +
Sbjct: 72 LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL----QQNVHFKEETVKLFIC-ELVM 126
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
L YL + ++I+RD K NILLD + + ++DF +A P +Q T + GT Y
Sbjct: 127 ALDYLQN--QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ---ITTMAGTKPYM 181
Query: 251 APEYMAT---GHLTAKSDVYSFGVVLLEMLSGRR 281
APE ++ + D +S GV E+L GRR
Sbjct: 182 APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 29/188 (15%)
Query: 105 IAVKRLNQ--ESLQGHLEWLTEIKHLGQLYHPNLVKLI-----GYCLEDDHRL-LVYEFM 156
+AVK+L++ +SL E++ L L H N++ L+ +ED + LV M
Sbjct: 48 VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 107
Query: 157 PKGSLENHLFRTGA---SYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNIL 213
G+ N++ + A ++Q L + + +GL Y+HS A +I+RD K SN+
Sbjct: 108 --GADLNNIVKCQALSDEHVQFLVYQL--------LRGLKYIHS--AGIIHRDLKPSNVA 155
Query: 214 LDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVV 272
++ + ++ DFGLA+ +V+TR Y APE M H D++S G +
Sbjct: 156 VNEDCELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCI 210
Query: 273 LLEMLSGR 280
+ E+L G+
Sbjct: 211 MAELLQGK 218
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 42/217 (19%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT--EIKHLGQLYH 133
+GEG +G V+K A+ G A+K++ E + T EI L +L H
Sbjct: 10 IGEGTYGVVYK----------AQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPK----------GSLENHLFRTGASYIQPLSWTIRMK 183
N+VKL +LV+E + + G LE+ T S++
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLES---VTAKSFL---------- 106
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
L G+AY H +V++RD K N+L++ K++DFGLA+ G T
Sbjct: 107 --LQLLNGIAYCHD--RRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHE 160
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSG 279
+ T Y AP+ M + + D++S G + EM++G
Sbjct: 161 IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 107/248 (43%), Gaps = 33/248 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKR--LNQESLQGHLEWLTEIKHLGQLYH 133
+GEG +G VFK E T ++A+KR L+ + L EI L +L H
Sbjct: 10 IGEGTYGTVFKAKNRE---------THEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
N+V+L D LV+EF + L + S L I KGL
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFC-----DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLG 115
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 253
+ HS V++RD K N+L++ N KL++FGLA+ + + + V T Y P+
Sbjct: 116 FCHS--RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TLWYRPPD 171
Query: 254 YMATGHLTAKS-DVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVM 312
+ L + S D++S G + E+ + RP N ++ +RIF+++
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANA------GRPLFPGNDVD------DQLKRIFRLL 219
Query: 313 DARIEGQY 320
E Q+
Sbjct: 220 GTPTEEQW 227
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 76/162 (46%), Gaps = 16/162 (9%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL-ENHLFRTGASYIQPLSWTI 180
L E+ L QL HPN++KL + + + LV E G L + + R S + +
Sbjct: 52 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDA---AV 108
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKDGPTGSQS 237
MK L G YLH K +++RD K N+LL+ K+ DFGL+ G +
Sbjct: 109 IMKQVLS---GTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK- 162
Query: 238 HVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+GT Y APE + + K DV+S GV+L +L G
Sbjct: 163 --MKERLGTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCG 201
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 79 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ D GLA+ +V+
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVA 184
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 42/217 (19%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT--EIKHLGQLYH 133
+GEG +G V+K A+ G A+K++ E + T EI L +L H
Sbjct: 10 IGEGTYGVVYK----------AQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPK----------GSLENHLFRTGASYIQPLSWTIRMK 183
N+VKL +LV+E + + G LE+ T S++
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLES---VTAKSFL---------- 106
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
L G+AY H +V++RD K N+L++ K++DFGLA+ G T
Sbjct: 107 --LQLLNGIAYCHD--RRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHE 160
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSG 279
+ T Y AP+ M + + D++S G + EM++G
Sbjct: 161 VVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 122/281 (43%), Gaps = 37/281 (13%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMV-IAVKRLNQESLQGHLEWLTEIKHLGQLYH 133
VLG+G +G V+ G R + V IA+K + + + EI L H
Sbjct: 15 VLGKGTYGIVYAG----------RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKH 64
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
N+V+ +G E+ + E +P GSL + L R+ ++ TI +GL
Sbjct: 65 KNIVQYLGSFSENGFIKIFMEQVPGGSL-SALLRSKWGPLKDNEQTIGFYTK-QILEGLK 122
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNA--KLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 251
YLH + ++++RD K N+L++ Y+ K+SDFG +K + + GT Y A
Sbjct: 123 YLHDN--QIVHRDIKGDNVLIN-TYSGVLKISDFGTSKR--LAGINPCTETFTGTLQYMA 177
Query: 252 PEYMATGH--LTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIF 309
PE + G +D++S G ++EM +G+ E +P + +F
Sbjct: 178 PEIIDKGPRGYGKAADIWSLGCTIIEMATGKP-----------PFYELGEP----QAAMF 222
Query: 310 QVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVV 350
+V ++ + + + +KC +P R ++++
Sbjct: 223 KVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLL 263
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 40/221 (18%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL--TEIKHLGQLYH 133
+G+G FG V++G G +AVK + + W EI L H
Sbjct: 11 IGKGRFGEVWRG-----------KWRGEEVAVKIFSSREERS---WFREAEIYQTVMLRH 56
Query: 134 PNLVKLIGYCLEDD----HRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAA 189
N++ I +D+ LV ++ GSL ++L R + ++ + +K+AL A
Sbjct: 57 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVT-VEGM-----IKLALSTA 110
Query: 190 KGLAYLHSD------KAKVIYRDFKTSNILLDLNYNAKLSDFGLA--KDGPTGSQSHVST 241
GLA+LH + K + +RD K+ NIL+ N ++D GLA D T +
Sbjct: 111 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPN 170
Query: 242 RVMGTYGYAAPEYMATG----HLTA--KSDVYSFGVVLLEM 276
+GT Y APE + H + ++D+Y+ G+V E+
Sbjct: 171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 86/206 (41%), Gaps = 20/206 (9%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V + + E TG A K + EI+ + L HP
Sbjct: 59 LGTGAFGVVHR--VTER-------ATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 109
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV L +D+ +++YEFM G LF A +S ++ KGL ++
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGE----LFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 165
Query: 196 HSDKAKVIYRDFKTSNILLDLNYN--AKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 253
H + ++ D K NI+ + KL DFGL V+T GT +AAPE
Sbjct: 166 HEN--NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPE 220
Query: 254 YMATGHLTAKSDVYSFGVVLLEMLSG 279
+ +D++S GV+ +LSG
Sbjct: 221 VAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 29/188 (15%)
Query: 105 IAVKRLNQ--ESLQGHLEWLTEIKHLGQLYHPNLVKLI-----GYCLEDDHRL-LVYEFM 156
+AVK+L++ +SL E++ L L H N++ L+ +ED + LV M
Sbjct: 56 VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 115
Query: 157 PKGSLENHLFRTGA---SYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNIL 213
G+ N++ + A ++Q L + + +GL Y+HS A +I+RD K SN+
Sbjct: 116 --GADLNNIVKCQALSDEHVQFLVYQL--------LRGLKYIHS--AGIIHRDLKPSNVA 163
Query: 214 LDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVV 272
++ + ++ DFGLA+ +V+TR Y APE M H D++S G +
Sbjct: 164 VNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 273 LLEMLSGR 280
+ E+L G+
Sbjct: 219 MAELLQGK 226
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 42/217 (19%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT--EIKHLGQLYH 133
+GEG +G V+K A+ G A+K++ E + T EI L +L H
Sbjct: 10 IGEGTYGVVYK----------AQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPK----------GSLENHLFRTGASYIQPLSWTIRMK 183
N+VKL +LV+E + + G LE+ T S++
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLES---VTAKSFL---------- 106
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
L G+AY H +V++RD K N+L++ K++DFGLA+ G T
Sbjct: 107 --LQLLNGIAYCHD--RRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHE 160
Query: 244 MGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSG 279
+ T Y AP+ M + + D++S G + EM++G
Sbjct: 161 VVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFXEPHARFY 146
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSH 238
++ L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 147 AAQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX--- 197
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 198 ----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFXEPHARFY 146
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSH 238
++ L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 147 AAQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX--- 197
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 198 ----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 14/178 (7%)
Query: 105 IAVKRLNQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENH 164
I + R S + + L E+ L L HPN++KL + + + LV E G L +
Sbjct: 67 IKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDE 126
Query: 165 LFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN---AK 221
+ + + +K L G+ YLH K +++RD K N+LL+ K
Sbjct: 127 IIHRMK--FNEVDAAVIIKQVLS---GVTYLH--KHNIVHRDLKPENLLLESKEKDALIK 179
Query: 222 LSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ DFGL+ +Q + R +GT Y APE + + K DV+S GV+L +L+G
Sbjct: 180 IVDFGLS--AVFENQKKMKER-LGTAYYIAPEVLRKKY-DEKCDVWSIGVILFILLAG 233
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFXEPHARFY 146
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSH 238
++ L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 147 AAQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX--- 197
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 198 ----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 110 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFXEPHARFY 167
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSH 238
++ L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 168 AAQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX--- 218
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRP 288
+ GT Y APE + + D ++ GV++ EM +G ++P
Sbjct: 219 ----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 84 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFXEPHARFY 141
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSH 238
++ L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 142 AAQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX--- 192
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 193 ----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 86/206 (41%), Gaps = 20/206 (9%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V + + E TG A K + EI+ + L HP
Sbjct: 165 LGTGAFGVVHR--VTER-------ATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 215
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV L +D+ +++YEFM G LF A +S ++ KGL ++
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGE----LFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 271
Query: 196 HSDKAKVIYRDFKTSNILLDLNYN--AKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 253
H + ++ D K NI+ + KL DFGL V+T GT +AAPE
Sbjct: 272 HEN--NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPE 326
Query: 254 YMATGHLTAKSDVYSFGVVLLEMLSG 279
+ +D++S GV+ +LSG
Sbjct: 327 VAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 95/229 (41%), Gaps = 28/229 (12%)
Query: 58 FSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG 117
F N + N+ LG+G F V + TG+ A K +N + L
Sbjct: 19 FMMNASTKFSDNYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTKKLSA 69
Query: 118 H----LEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYI 173
LE E + +L HPN+V+L E+ LV++ + G L +
Sbjct: 70 RDFQKLE--REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE 127
Query: 174 QPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKD 230
S I+ + + +AY HS+ +++R+ K N+LL KL+DFGLA +
Sbjct: 128 ADASHCIQQIL-----ESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180
Query: 231 GPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
H GT GY +PE + + D+++ GV+L +L G
Sbjct: 181 VNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFAEPHARFY 146
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSH 238
++ L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 147 AAQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX--- 197
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 198 ----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%), Gaps = 31/189 (16%)
Query: 172 YIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG 231
Y +P++ + + A+G+ +L S K I+RD NILL N K+ DFGLA+D
Sbjct: 192 YKEPITMEDLISYSFQVARGMEFLSS--RKCIHRDLAARNILLSENNVVKICDFGLARDI 249
Query: 232 PTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS-------GRRVID 284
+ APE + + KSDV+S+GV+L E+ S G + +D
Sbjct: 250 YKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQ-MD 308
Query: 285 KNRPSREHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRP 344
++ SR + P S I+Q+M + C +PK RP
Sbjct: 309 EDFCSRLREGMRMRAPEY-STPEIYQIM--------------------LDCWHRDPKERP 347
Query: 345 TMDEVVKAL 353
E+V+ L
Sbjct: 348 RFAELVEKL 356
Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL-TEIKHLGQL-YH 133
LG G FG V + + + T +AVK L + + + L TE+K L + +H
Sbjct: 35 LGRGAFGKV----VQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHH 90
Query: 134 PNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHL 165
N+V L+G C + L+V E+ G+L N+L
Sbjct: 91 LNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 121/293 (41%), Gaps = 53/293 (18%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKR-LNQESLQGHLEWLTEIKH 127
+R +LG+GGFG VF G H VI R L L + E+
Sbjct: 32 EYRLGPLLGKGGFGTVFAG----HRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVAL 87
Query: 128 LGQLY----HPNLVKLIGYCLEDDHRLLVYE-FMPKGSLENHLFRTGASYIQPLSWTIRM 182
L ++ HP +++L+ + + +LV E +P L +++ G P
Sbjct: 88 LWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQ 147
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN-AKLSDFG---LAKDGPTGSQSH 238
VA A H V++RD K NIL+DL AKL DFG L D P
Sbjct: 148 VVA-------AIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPY----- 195
Query: 239 VSTRVMGTYGYAAPEYMATGHLTA-KSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEW 297
T GT Y+ PE+++ A + V+S G++L +M+ G ++++
Sbjct: 196 --TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ---------- 243
Query: 298 AKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVV 350
++++A + + + L +CL+ +P RP+++E++
Sbjct: 244 ------------EILEAEL--HFPAHVSPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFY 146
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSH 238
++ L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 147 AAQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX--- 197
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 198 ----LXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 42/221 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE--------NHLFRTGASYI---QPLSWTI 180
H N++ L+ F P SLE HL + I Q L+
Sbjct: 79 KHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 240
+ +GL Y+HS A +I+RD K SN+ ++ + K+ DF LA+ +V+
Sbjct: 127 VQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVA 184
Query: 241 TRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
TR Y APE M H D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 90 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFY 147
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSH 238
++ L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 148 AAQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX--- 198
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 199 ----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFY 146
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSH 238
++ L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 147 AAQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX--- 197
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 198 ----LAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 102/230 (44%), Gaps = 41/230 (17%)
Query: 63 LKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL--- 119
++ R+ +P +G G +G V +D T G +A+K+L + Q L
Sbjct: 23 VRAVYRDLQP---VGSGAYGAVCSA-VDGRT--------GAKVAIKKLYR-PFQSELFAK 69
Query: 120 EWLTEIKHLGQLYHPNLVKLIGYCLEDD------HRLLVYEFMPK--GSLENHLFRTGAS 171
E++ L + H N++ L+ D+ LV FM G L H + G
Sbjct: 70 RAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE-KLGED 128
Query: 172 YIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG 231
IQ L + + KGL Y+H+ A +I+RD K N+ ++ + K+ DFGLA+
Sbjct: 129 RIQFLVYQM--------LKGLRYIHA--AGIIHRDLKPGNLAVNEDCELKILDFGLARQA 178
Query: 232 PTGSQSHVSTRVMGTYGYAAPEYMATG-HLTAKSDVYSFGVVLLEMLSGR 280
+ V TR Y APE + T D++S G ++ EM++G+
Sbjct: 179 DSEMXGXVVTR-----WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFY 146
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSH 238
++ L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 147 AAQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX--- 197
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 198 ----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFY 146
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSH 238
++ L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 147 AAQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX--- 197
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 198 ----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFY 146
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSH 238
++ L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 147 AAQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX--- 197
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 198 ----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 100/217 (46%), Gaps = 30/217 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 42 QFERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKV 184
+ L + P LVKL + +D+ L +V E++ G + +HL R G + +P + ++
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQI 150
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVSTR 242
L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 151 VLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX------- 197
Query: 243 VMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFY 146
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSH 238
++ L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 147 AAQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX--- 197
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 198 ----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 76/162 (46%), Gaps = 16/162 (9%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL-ENHLFRTGASYIQPLSWTI 180
L E+ L QL HPN++KL + + + LV E G L + + R S + +
Sbjct: 69 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDA---AV 125
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKDGPTGSQS 237
MK L G YLH K +++RD K N+LL+ K+ DFGL+ G +
Sbjct: 126 IMKQVLS---GTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK- 179
Query: 238 HVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+GT Y APE + + K DV+S GV+L +L G
Sbjct: 180 --MKERLGTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCG 218
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFY 146
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSH 238
++ L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 147 AAQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX--- 197
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 198 ----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 141/343 (41%), Gaps = 63/343 (18%)
Query: 50 LLGSNIKSFSFNGL-----KTATRNFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGM 103
LL + S S +GL +T R +G+G +G V++G W E+
Sbjct: 14 LLDHSCTSGSGSGLPFLVQRTVARQITLLECVGKGRYGEVWRGSWQGEN----------- 62
Query: 104 VIAVKRLNQESLQGHLEWL--TEIKHLGQLYHPNLVKLIGYCLEDDHR----LLVYEFMP 157
+AVK S + W TE+ + L H N++ I + H L+ +
Sbjct: 63 -VAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 118
Query: 158 KGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSD------KAKVIYRDFKTSN 211
GSL ++L T + L ++ L A GLA+LH + K + +RD K+ N
Sbjct: 119 MGSLYDYLQLTTLDTVSCL------RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKN 172
Query: 212 ILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV-----MGTYGYAAPEYM-ATGHLTA--- 262
IL+ N ++D GLA SQS V +GT Y APE + T +
Sbjct: 173 ILVKKNGQCCIADLGLAV---MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDS 229
Query: 263 --KSDVYSFGVVLLE----MLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDAR- 315
+ D+++FG+VL E M+S V D P + + P + R++ V R
Sbjct: 230 YKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD---VVPNDPSFEDMRKVVCVDQQRP 286
Query: 316 -IEGQYSLGAALKT-AVLAIKCLSNEPKFRPTMDEVVKALEQI 356
I ++ L + A L +C P R T + K L +I
Sbjct: 287 NIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 329
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 136/324 (41%), Gaps = 58/324 (17%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL 122
+T R+ +G+G +G V++G W E+ +AVK + + W
Sbjct: 4 RTVARDITLLECVGKGRYGEVWRGSWQGEN------------VAVKIFSSRDEKS---WF 48
Query: 123 --TEIKHLGQLYHPNLVKLIGYCLEDDHR----LLVYEFMPKGSLENHLFRTGASYIQPL 176
TE+ + L H N++ I + H L+ + GSL ++L T + L
Sbjct: 49 RETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL 108
Query: 177 SWTIRMKVALGAAKGLAYLHSD------KAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 230
++ L A GLA+LH + K + +RD K+ NIL+ N ++D GLA
Sbjct: 109 ------RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-- 160
Query: 231 GPTGSQSHVSTRV-----MGTYGYAAPEYM-ATGHLTA-----KSDVYSFGVVLLE---- 275
SQS V +GT Y APE + T + + D+++FG+VL E
Sbjct: 161 -VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
Query: 276 MLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDAR--IEGQYSLGAALKT-AVLA 332
M+S V D P ++++ P + R++ V R I ++ L + A L
Sbjct: 220 MVSNGIVEDYKPPF--YDVVP-NDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLM 276
Query: 333 IKCLSNEPKFRPTMDEVVKALEQI 356
+C P R T + K L +I
Sbjct: 277 KECWYQNPSARLTALRIKKTLTKI 300
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFY 146
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSH 238
++ L YLHS +IYRD K N+++D +++DFG AK G T
Sbjct: 147 AAQIVLT----FEYLHS--LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWX--- 197
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 198 ----LCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 26/192 (13%)
Query: 101 TGMVIAVKRL----NQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFM 156
TG VIAVK++ N+E + L L + L P +V+ G + + + E M
Sbjct: 49 TGHVIAVKQMRRSGNKEENKRILMDLDVV--LKSHDCPYIVQCFGTFITNTDVFIAMELM 106
Query: 157 PKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL 216
G+ L + P+ I K+ + K L YL +K VI+RD K SNILLD
Sbjct: 107 --GTCAEKLKKRMQG---PIPERILGKMTVAIVKALYYL-KEKHGVIHRDVKPSNILLDE 160
Query: 217 NYNAKLSDFGL--------AKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYS 268
KL DFG+ AKD G ++++ + P+Y ++DV+S
Sbjct: 161 RGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDY------DIRADVWS 214
Query: 269 FGVVLLEMLSGR 280
G+ L+E+ +G+
Sbjct: 215 LGISLVELATGQ 226
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 76 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFY 133
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSH 238
++ L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 134 AAQIVLT----FEYLHS--LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWX--- 184
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ EM +G
Sbjct: 185 ----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ LQG E++ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 135 NLVKLIGYCL-----EDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
N+V+L + +D+ L LV +++P+ + A P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 131
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQ--SHVSTRVMG 245
+ LAY+HS + +RD K N+LLD + KL DFG AK G S++ +R
Sbjct: 132 FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 187
Query: 246 TYGYAAPEYM--ATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
Y APE + AT + T+ DV+S G VL E+L G+ +
Sbjct: 188 ---YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ LQG E++ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 135 NLVKLIGYCL-----EDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
N+V+L + +D+ L LV +++P+ + A P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 131
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQ--SHVSTRVMG 245
+ LAY+HS + +RD K N+LLD + KL DFG AK G S++ +R
Sbjct: 132 FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 187
Query: 246 TYGYAAPEYM--ATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
Y APE + AT + T+ DV+S G VL E+L G+ +
Sbjct: 188 ---YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFY 146
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSH 238
++ L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 147 AAQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX--- 197
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y APE + + D ++ GV++ +M +G
Sbjct: 198 ----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 22/207 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V + TG V K +N EI + QL+HP
Sbjct: 59 LGSGAFGVVHRC---------VEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPK 109
Query: 136 LVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAY 194
L+ L ED + + L+ EF+ G LF A+ +S + A +GL +
Sbjct: 110 LINLHD-AFEDKYEMVLILEFLSGGE----LFDRIAAEDYKMSEAEVINYMRQACEGLKH 164
Query: 195 LHSDKAKVIYRDFKTSNILLDLNY--NAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAP 252
+H + +++ D K NI+ + + K+ DFGLA V+T T +AAP
Sbjct: 165 MH--EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAP 219
Query: 253 EYMATGHLTAKSDVYSFGVVLLEMLSG 279
E + + +D+++ GV+ +LSG
Sbjct: 220 EIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 102/237 (43%), Gaps = 37/237 (15%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG--HLEWLTEIKHLGQLYH 133
+G+G FG VFK H TG +A+K++ E+ + + L EIK L L H
Sbjct: 26 IGQGTFGEVFKA---RHR------KTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 134 PNLVKLIGYCLEDDHRL--------LVYEFMP---KGSLENHLFRTGASYIQPLSWTIRM 182
N+V LI C LV++F G L N L + S I+
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK-------- 128
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH---V 239
+V GL Y+H +K +++RD K +N+L+ + KL+DFGLA+ S
Sbjct: 129 RVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 240 STRVMGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
RV+ T Y PE + D++ G ++ EM + ++ N + LI
Sbjct: 187 XNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
KGL Y+HS A V++RD K N+ ++ + K+ DFGLA+ +V TR Y
Sbjct: 155 KGLKYIHS--AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WY 207
Query: 250 AAPEYMATG-HLTAKSDVYSFGVVLLEMLSGRRVI 283
APE + + H D++S G ++ EML+G+ +
Sbjct: 208 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF 242
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
KGL Y+HS A V++RD K N+ ++ + K+ DFGLA+ +V TR Y
Sbjct: 137 KGLKYIHS--AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WY 189
Query: 250 AAPEYMATG-HLTAKSDVYSFGVVLLEMLSGRRVI 283
APE + + H D++S G ++ EML+G+ +
Sbjct: 190 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF 224
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 108/269 (40%), Gaps = 41/269 (15%)
Query: 100 GTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDD--HRLLVYEFMP 157
G +V+ V ++ S + ++ E L HPN++ ++G C H L+ + P
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXP 92
Query: 158 KGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLN 217
GSL N + G +++ S + K AL A+G A+LH+ + + + ++ +D +
Sbjct: 93 YGSLYN-VLHEGTNFVVDQSQAV--KFALDXARGXAFLHTLEPLIPRHALNSRSVXIDED 149
Query: 218 YNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAK--------SDVYSF 269
A++ S + V AP ++A L K +D +SF
Sbjct: 150 XTARI------------SXADVKFSFQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSF 197
Query: 270 GVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTA 329
V+L E++ +RE + + + K V + G + +
Sbjct: 198 AVLLWELV-----------TREVPFADLSNXEIGXK-----VALEGLRPTIPPGISPHVS 241
Query: 330 VLAIKCLSNEPKFRPTMDEVVKALEQIQD 358
L C + +P RP D +V LE+ QD
Sbjct: 242 KLXKICXNEDPAKRPKFDXIVPILEKXQD 270
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 102/237 (43%), Gaps = 37/237 (15%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG--HLEWLTEIKHLGQLYH 133
+G+G FG VFK H TG +A+K++ E+ + + L EIK L L H
Sbjct: 26 IGQGTFGEVFKA---RHR------KTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 134 PNLVKLIGYCLEDDHRL--------LVYEFMP---KGSLENHLFRTGASYIQPLSWTIRM 182
N+V LI C LV++F G L N L + S I+
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIK-------- 128
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH---V 239
+V GL Y+H +K +++RD K +N+L+ + KL+DFGLA+ S
Sbjct: 129 RVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 240 STRVMGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
RV+ T Y PE + D++ G ++ EM + ++ N + LI
Sbjct: 187 XNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 28/218 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGH----LEWLTE 124
N+ LG+G F V + TG+ A K +N + L LE E
Sbjct: 6 NYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTKKLSARDFQKLE--RE 54
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKV 184
+ +L HPN+V+L E+ LV++ + G L + S I+ +
Sbjct: 55 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL 114
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKDGPTGSQSHVST 241
+ +AY HS+ +++R+ K N+LL KL+DFGLA + H
Sbjct: 115 -----ESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--- 164
Query: 242 RVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GT GY +PE + + D+++ GV+L +L G
Sbjct: 165 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 102/237 (43%), Gaps = 37/237 (15%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG--HLEWLTEIKHLGQLYH 133
+G+G FG VFK H TG +A+K++ E+ + + L EIK L L H
Sbjct: 26 IGQGTFGEVFKA---RHR------KTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 134 PNLVKLIGYCLEDDHRL--------LVYEFMP---KGSLENHLFRTGASYIQPLSWTIRM 182
N+V LI C LV++F G L N L + S I+
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK-------- 128
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH---V 239
+V GL Y+H +K +++RD K +N+L+ + KL+DFGLA+ S
Sbjct: 129 RVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 240 STRVMGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
RV+ T Y PE + D++ G ++ EM + ++ N + LI
Sbjct: 187 XNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 101/224 (45%), Gaps = 38/224 (16%)
Query: 69 NFRPDSVLGEGGFG-CVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
+F P VLG G G V++G D +AVKR+ E + ++
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRD-----------VAVKRILPECFSFADREVQLLRE 73
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRTGASYI--QPLSWTIRMKV 184
+ HPN+++ +C E D + + +L+ ++ + +++ +P++ +
Sbjct: 74 SDE--HPNVIRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPIT------L 123
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL-----NYNAKLSDFGLAKDGPTGSQSHV 239
GLA+LHS +++RD K NIL+ + A +SDFGL K G S
Sbjct: 124 LQQTTSGLAHLHS--LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS-F 180
Query: 240 STR--VMGTYGYAAPEYMATG---HLTAKSDVYSFGVVLLEMLS 278
S R V GT G+ APE ++ + T D++S G V ++S
Sbjct: 181 SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 28/218 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGH----LEWLTE 124
N+ LG+G F V + TG+ A K +N + L LE E
Sbjct: 7 NYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTKKLSARDFQKLE--RE 55
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKV 184
+ +L HPN+V+L E+ LV++ + G L + S I+ +
Sbjct: 56 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL 115
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKDGPTGSQSHVST 241
+ +AY HS+ +++R+ K N+LL KL+DFGLA + H
Sbjct: 116 -----ESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--- 165
Query: 242 RVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GT GY +PE + + D+++ GV+L +L G
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 61 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 107
Query: 135 NLVKLIGYCL-----EDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
N+V+L + +D+ L LV +++P+ + A P+ + L
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 165
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQ--SHVSTRVMG 245
+ LAY+HS + +RD K N+LLD + KL DFG AK G S++ +R
Sbjct: 166 FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 221
Query: 246 TYGYAAPEYM--ATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
Y APE + AT + T+ DV+S G VL E+L G+ +
Sbjct: 222 ---YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIF 257
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 102/237 (43%), Gaps = 37/237 (15%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG--HLEWLTEIKHLGQLYH 133
+G+G FG VFK H TG +A+K++ E+ + + L EIK L L H
Sbjct: 25 IGQGTFGEVFKA---RHR------KTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 134 PNLVKLIGYCLEDDHRL--------LVYEFMP---KGSLENHLFRTGASYIQPLSWTIRM 182
N+V LI C LV++F G L N L + S I+
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK-------- 127
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH---V 239
+V GL Y+H +K +++RD K +N+L+ + KL+DFGLA+ S
Sbjct: 128 RVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 185
Query: 240 STRVMGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLI 295
RV+ T Y PE + D++ G ++ EM + ++ N + LI
Sbjct: 186 XNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 241
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 65 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 111
Query: 135 NLVKLIGYCL-----EDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
N+V+L + +D+ L LV +++P+ + A P+ + L
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 169
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQ--SHVSTRVMG 245
+ LAY+HS + +RD K N+LLD + KL DFG AK G S++ +R
Sbjct: 170 FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 225
Query: 246 TYGYAAPEYM--ATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
Y APE + AT + T+ DV+S G VL E+L G+ +
Sbjct: 226 ---YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIF 261
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 63 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 109
Query: 135 NLVKLIGYCL-----EDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
N+V+L + +D+ L LV +++P+ + A P+ + L
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 167
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQ--SHVSTRVMG 245
+ LAY+HS + +RD K N+LLD + KL DFG AK G S++ +R
Sbjct: 168 FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 223
Query: 246 TYGYAAPEYM--ATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
Y APE + AT + T+ DV+S G VL E+L G+ +
Sbjct: 224 ---YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIF 259
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 55 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 101
Query: 135 NLVKLIGYCL-----EDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
N+V+L + +D+ L LV +++P+ + A P+ + L
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 159
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQ--SHVSTRVMG 245
+ LAY+HS + +RD K N+LLD + KL DFG AK G S++ +R
Sbjct: 160 FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 215
Query: 246 TYGYAAPEYM--ATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
Y APE + AT + T+ DV+S G VL E+L G+ +
Sbjct: 216 ---YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIF 251
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 134/314 (42%), Gaps = 73/314 (23%)
Query: 73 DSVLGEGGFG-CVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQL 131
+ +LG G G VF+G RP +AVKR+ + L EIK L +
Sbjct: 20 EKILGYGSSGTVVFQGSFQ------GRP-----VAVKRMLIDFCDIAL---MEIKLLTES 65
Query: 132 Y-HPNLVKLIGYCLEDDHRLL----------VYEFMPKGSLENHLFRTGASYIQPLSWTI 180
HPN+++ YC E R L + + + ++ + + Y P+S
Sbjct: 66 DDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY-NPISLLR 122
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL-------------NYNAKLSDFGL 227
++ A G+A+LHS K+I+RD K NIL+ N +SDFGL
Sbjct: 123 QI------ASGVAHLHS--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 228 AKDGPTGSQSHVSTRV---MGTYGYAAPEYMATGH-------LTAKSDVYSFGVVLLEML 277
K +G QS T + GT G+ APE + + LT D++S G V +L
Sbjct: 175 CKKLDSG-QSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
Query: 278 SGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLS 337
S + ++ SRE N+I R IF + + + SL A + L + +
Sbjct: 234 SKGKHPFGDKYSRESNII----------RGIFSLDEMKCLHDRSLIA--EATDLISQMID 281
Query: 338 NEPKFRPTMDEVVK 351
++P RPT +V++
Sbjct: 282 HDPLKRPTAMKVLR 295
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 28/218 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGH----LEWLTE 124
N+ LG+G F V + TG+ A K +N + L LE E
Sbjct: 7 NYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTKKLSARDFQKLE--RE 55
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKV 184
+ +L HPN+V+L E+ LV++ + G L + S I+ +
Sbjct: 56 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL 115
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKDGPTGSQSHVST 241
+ +AY HS+ +++R+ K N+LL KL+DFGLA + H
Sbjct: 116 -----ESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--- 165
Query: 242 RVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GT GY +PE + + D+++ GV+L +L G
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 18/161 (11%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFY 146
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSH 238
++ L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 147 AAQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX--- 197
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT Y AP + + D ++ GV++ EM +G
Sbjct: 198 ----LCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 107/218 (49%), Gaps = 30/218 (13%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ LQG E++ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 135 NLVKLIGYCL-----EDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
N+V+L + +D+ L LV +++P + A P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQL-- 131
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGTY 247
+ LAY+HS + +RD K N+LLD + KL DFG AK G + +VS + +
Sbjct: 132 FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX--ICSR 186
Query: 248 GYAAPEYM--ATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
Y APE + AT + T+ DV+S G VL E+L G+ +
Sbjct: 187 YYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 106 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 152
Query: 135 NLVKLIGYCL-----EDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
N+V+L + +D+ L LV +++P+ + A P+ + L
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 210
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQ--SHVSTRVMG 245
+ LAY+HS + +RD K N+LLD + KL DFG AK G S++ +R
Sbjct: 211 FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 266
Query: 246 TYGYAAPEYM--ATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
Y APE + AT + T+ DV+S G VL E+L G+ +
Sbjct: 267 ---YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIF 302
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 40 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 86
Query: 135 NLVKLIGYCL-----EDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
N+V+L + +D+ L LV +++P+ + A P+ + L
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 144
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQ--SHVSTRVMG 245
+ LAY+HS + +RD K N+LLD + KL DFG AK G S++ +R
Sbjct: 145 FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 200
Query: 246 TYGYAAPEYM--ATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
Y APE + AT + T+ DV+S G VL E+L G+ +
Sbjct: 201 ---YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIF 236
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 132/312 (42%), Gaps = 58/312 (18%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL--TEIKHLGQLY 132
+G+G +G V++G W E+ +AVK + + W TE+ + L
Sbjct: 16 VGKGRYGEVWRGSWQGEN------------VAVKIFSSRDEKS---WFRETELYNTVMLR 60
Query: 133 HPNLVKLIGYCLEDDHR----LLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
H N++ I + H L+ + GSL ++L T + L ++ L
Sbjct: 61 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL------RIVLSI 114
Query: 189 AKGLAYLHSD------KAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 242
A GLA+LH + K + +RD K+ NIL+ N ++D GLA SQS
Sbjct: 115 ASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA---VMHSQSTNQLD 171
Query: 243 V-----MGTYGYAAPEYM-ATGHLTA-----KSDVYSFGVVLLE----MLSGRRVIDKNR 287
V +GT Y APE + T + + D+++FG+VL E M+S V D
Sbjct: 172 VGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP 231
Query: 288 PSREHNLIEWAKPYLQSKRRIFQVMDAR--IEGQYSLGAALKT-AVLAIKCLSNEPKFRP 344
P ++++ P + R++ V R I ++ L + A L +C P R
Sbjct: 232 PF--YDVVP-NDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARL 288
Query: 345 TMDEVVKALEQI 356
T + K L +I
Sbjct: 289 TALRIKKTLTKI 300
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 36/265 (13%)
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDD----HRLLVYEFMPKGSLENHLFRTGASYIQPLSW 178
TEI + H N++ I ++ L+ ++ GSL ++L T L
Sbjct: 80 TEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT------LDA 133
Query: 179 TIRMKVALGAAKGLAYLHSD------KAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGP 232
+K+A + GL +LH++ K + +RD K+ NIL+ N ++D GLA
Sbjct: 134 KSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFI 193
Query: 233 TGSQS---HVSTRVMGTYGYAAPEYMATG----HLTA--KSDVYSFGVVLLEM----LSG 279
+ + +TRV GT Y PE + H + +D+YSFG++L E+ +SG
Sbjct: 194 SDTNEVDIPPNTRV-GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSG 252
Query: 280 RRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDAR--IEGQYSLGAALK-TAVLAIKCL 336
V + P H+L+ + P + R I + R ++S L+ L +C
Sbjct: 253 GIVEEYQLPY--HDLVP-SDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECW 309
Query: 337 SNEPKFRPTMDEVVKALEQIQDTND 361
++ P R T V K L ++ ++ D
Sbjct: 310 AHNPASRLTALRVKKTLAKMSESQD 334
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 32 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 78
Query: 135 NLVKLIGYCL-----EDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
N+V+L + +D+ L LV +++P+ + A P+ + L
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 136
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQ--SHVSTRVMG 245
+ LAY+HS + +RD K N+LLD + KL DFG AK G S++ +R
Sbjct: 137 FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 192
Query: 246 TYGYAAPEYM--ATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
Y APE + AT + T+ DV+S G VL E+L G+ +
Sbjct: 193 ---YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIF 228
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 73
Query: 135 NLVKLIGYCL-----EDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
N+V+L + +D+ L LV +++P+ + A P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 131
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQ--SHVSTRVMG 245
+ LAY+HS + +RD K N+LLD + KL DFG AK G S++ +R
Sbjct: 132 FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 187
Query: 246 TYGYAAPEYM--ATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
Y APE + AT + T+ DV+S G VL E+L G+ +
Sbjct: 188 ---YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 30/218 (13%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 61 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 107
Query: 135 NLVKLIGYCL-----EDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
N+V+L + +D+ L LV +++P+ + A P+ + L
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 165
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGTY 247
+ LAY+HS + +RD K N+LLD + KL DFG AK G + +VS + Y
Sbjct: 166 FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX-ICSRY 221
Query: 248 GYAAPEYM--ATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
Y APE + AT + T+ DV+S G VL E+L G+ +
Sbjct: 222 -YRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIF 257
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI + L HPN+V+ L H +V E+ G L + G + +
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 124
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLN--YNAKLSDFGLAKDGPTGSQSHVST 241
++ G++Y H+ +V +RD K N LLD + K+ DFG +K SQ +
Sbjct: 125 IS-----GVSYCHA--MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST- 176
Query: 242 RVMGTYGYAAPEYMATGHLTAK-SDVYSFGVVLLEMLSG 279
+GT Y APE + K +DV+S GV L ML G
Sbjct: 177 --VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 30/218 (13%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 35 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 81
Query: 135 NLVKLIGYCL-----EDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
N+V+L + +D+ L LV +++P+ + A P+ + L
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 139
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGTY 247
+ LAY+HS + +RD K N+LLD + KL DFG AK G + +VS + +
Sbjct: 140 FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX--ICSR 194
Query: 248 GYAAPEYM--ATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
Y APE + AT + T+ DV+S G VL E+L G+ +
Sbjct: 195 YYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIF 231
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 30/218 (13%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 46 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 92
Query: 135 NLVKLIGYCL-----EDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
N+V+L + +D+ L LV +++P+ + A P+ + L
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 150
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGTY 247
+ LAY+HS + +RD K N+LLD + KL DFG AK G + +VS + +
Sbjct: 151 FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX--ICSR 205
Query: 248 GYAAPEYM--ATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
Y APE + AT + T+ DV+S G VL E+L G+ +
Sbjct: 206 YYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIF 242
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI + L HPN+V+ L H +V E+ G L + G + +
Sbjct: 64 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 123
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLN--YNAKLSDFGLAKDGPTGSQSHVST 241
++ G++Y H+ +V +RD K N LLD + K+ DFG +K SQ +
Sbjct: 124 IS-----GVSYCHA--MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST- 175
Query: 242 RVMGTYGYAAPEYMATGHLTAK-SDVYSFGVVLLEMLSG 279
+GT Y APE + K +DV+S GV L ML G
Sbjct: 176 --VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 30/218 (13%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 39 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 85
Query: 135 NLVKLIGYCL-----EDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
N+V+L + +D+ L LV +++P+ + A P+ + L
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 143
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGTY 247
+ LAY+HS + +RD K N+LLD + KL DFG AK G + +VS + +
Sbjct: 144 FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX--ICSR 198
Query: 248 GYAAPEYM--ATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
Y APE + AT + T+ DV+S G VL E+L G+ +
Sbjct: 199 YYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIF 235
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI + L HPN+V+ L H ++ E+ G L + G + +
Sbjct: 66 EIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQL 125
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLN--YNAKLSDFGLAKDGPTGSQSHVST 241
++ G++Y HS ++ +RD K N LLD + K+ DFG +K SQ +
Sbjct: 126 LS-----GVSYCHS--MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST- 177
Query: 242 RVMGTYGYAAPEYMATGHLTAK-SDVYSFGVVLLEMLSG 279
+GT Y APE + K +DV+S GV L ML G
Sbjct: 178 --VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 18/161 (11%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTI 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R G + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFY 146
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSH 238
++ L YLHS +IYRD K N+L+D +++DFG AK G T
Sbjct: 147 AAQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX--- 197
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT APE + + D ++ GV++ EM +G
Sbjct: 198 ----LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 22/227 (9%)
Query: 61 NGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPAR----PGTGMVIAVKRLNQESLQ 116
+G+ T N S++ G+ V K I +Y+ + T M AVK +++ S +
Sbjct: 9 SGVDLGTENLYFQSMVFSDGY--VVKETIGVGSYSECKRCVHKATNMEYAVKVIDK-SKR 65
Query: 117 GHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPL 176
E + + GQ HPN++ L + H LV E M G L + + R +
Sbjct: 66 DPSEEIEILLRYGQ--HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREA 123
Query: 177 SWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNIL-LDLNYNA---KLSDFGLAKDGP 232
S+ + K + YLHS V++RD K SNIL +D + N ++ DFG AK
Sbjct: 124 SFVLHT-----IGKTVEYLHSQG--VVHRDLKPSNILYVDESGNPECLRICDFGFAKQ-- 174
Query: 233 TGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+++ + T + APE + D++S G++L ML+G
Sbjct: 175 LRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E+ L Q+ HPN++ L +L+ E + G L + L + + + + I+
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ- 123
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNI-LLDLNY---NAKLSDFGLAKDGPTGSQSHV 239
G+ YLH+ K+ + D K NI LLD N + KL DFGLA + G +
Sbjct: 124 ----ILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK- 176
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 177 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 129/309 (41%), Gaps = 67/309 (21%)
Query: 73 DSVLGEGGFG-CVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQL 131
+ +LG G G VF+G RP +AVKR+ + L EIK L +
Sbjct: 38 EKILGYGSSGTVVFQGSFQ------GRP-----VAVKRMLIDFCDIAL---MEIKLLTES 83
Query: 132 Y-HPNLVKLIGYCLEDDHRLL----------VYEFMPKGSLENHLFRTGASYIQPLSWTI 180
HPN+++ YC E R L + + + ++ + + Y P+S
Sbjct: 84 DDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY-NPISLLR 140
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL-------------NYNAKLSDFGL 227
++ A G+A+LHS K+I+RD K NIL+ N +SDFGL
Sbjct: 141 QI------ASGVAHLHS--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 228 AKDGPTGSQSHVST--RVMGTYGYAAPEYMATG---HLTAKSDVYSFGVVLLEMLSGRRV 282
K +G GT G+ APE + LT D++S G V +LS +
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 283 IDKNRPSREHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKF 342
++ SRE N+I R IF + + + SL A + L + + ++P
Sbjct: 253 PFGDKYSRESNII----------RGIFSLDEMKCLHDRSLIA--EATDLISQMIDHDPLK 300
Query: 343 RPTMDEVVK 351
RPT +V++
Sbjct: 301 RPTAMKVLR 309
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 40/225 (17%)
Query: 76 LGEGGFGCV--FKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY- 132
LGEGGF V +G D H YA R ++ ++ ++E Q + + +L+
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKR-----ILCHEQQDREEAQREAD-------MHRLFN 84
Query: 133 HPNLVKLIGYCLED----DHRLLVYEFMPKGSLENHL--FRTGASYI--QPLSWTIRMKV 184
HPN+++L+ YCL + L+ F +G+L N + + +++ + W +
Sbjct: 85 HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLL---- 140
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPT---GSQSHVST 241
LG +GL +H+ +RD K +NILL L D G GS+ ++
Sbjct: 141 -LGICRGLEAIHAKGYA--HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTL 197
Query: 242 RVMG----TYGYAAPEYMATGH---LTAKSDVYSFGVVLLEMLSG 279
+ T Y APE + + ++DV+S G VL M+ G
Sbjct: 198 QDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFG 242
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 129/309 (41%), Gaps = 67/309 (21%)
Query: 73 DSVLGEGGFG-CVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQL 131
+ +LG G G VF+G RP +AVKR+ + L EIK L +
Sbjct: 38 EKILGYGSSGTVVFQGSFQ------GRP-----VAVKRMLIDFCDIAL---MEIKLLTES 83
Query: 132 Y-HPNLVKLIGYCLEDDHRLL----------VYEFMPKGSLENHLFRTGASYIQPLSWTI 180
HPN+++ YC E R L + + + ++ + + Y P+S
Sbjct: 84 DDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY-NPISLLR 140
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL-------------NYNAKLSDFGL 227
++ A G+A+LHS K+I+RD K NIL+ N +SDFGL
Sbjct: 141 QI------ASGVAHLHS--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 228 AKDGPTGSQSHVST--RVMGTYGYAAPEYMATG---HLTAKSDVYSFGVVLLEMLSGRRV 282
K +G GT G+ APE + LT D++S G V +LS +
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 283 IDKNRPSREHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKF 342
++ SRE N+I R IF + + + SL A + L + + ++P
Sbjct: 253 PFGDKYSRESNII----------RGIFSLDEMKCLHDRSLIA--EATDLISQMIDHDPLK 300
Query: 343 RPTMDEVVK 351
RPT +V++
Sbjct: 301 RPTAMKVLR 309
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 30/218 (13%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 39 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 85
Query: 135 NLVKLIGYCL-----EDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
N+V+L + +D+ L LV +++P+ + A P+ + L
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 143
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGTY 247
+ LAY+HS + +RD K N+LLD + KL DFG AK G + +VS + +
Sbjct: 144 FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX--ICSR 198
Query: 248 GYAAPEYM--ATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
Y APE + AT + T+ DV+S G VL E+L G+ +
Sbjct: 199 YYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIF 235
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 30/218 (13%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 73
Query: 135 NLVKLIGYCL-----EDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
N+V+L + +D+ L LV +++P+ + A P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 131
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGTY 247
+ LAY+HS + +RD K N+LLD + KL DFG AK G + +VS + +
Sbjct: 132 FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX--ICSR 186
Query: 248 GYAAPEYM--ATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
Y APE + AT + T+ DV+S G VL E+L G+ +
Sbjct: 187 YYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 30/218 (13%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 73
Query: 135 NLVKLIGYCL-----EDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
N+V+L + +D+ L LV +++P+ + A P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 131
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGTY 247
+ LAY+HS + +RD K N+LLD + KL DFG AK G + +VS + +
Sbjct: 132 FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX--ICSR 186
Query: 248 GYAAPEYM--ATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
Y APE + AT + T+ DV+S G VL E+L G+ +
Sbjct: 187 YYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 103/248 (41%), Gaps = 38/248 (15%)
Query: 43 PRTEGE--ILLGSNIKSFSFN---GLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPA 97
P+TE +LL +K + + AT R LG G FG V + +++
Sbjct: 67 PKTEDNEGVLLTEKLKPVDYEYREEVHWATHQLR----LGRGSFGEVHR--MEDKQ---- 116
Query: 98 RPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMP 157
TG AVK++ E + E+ L P +V L G E + E +
Sbjct: 117 ---TGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLE 168
Query: 158 KGSLENHLFRTGASYIQPLSWTIRMKVALGAA-KGLAYLHSDKAKVIYRDFKTSNILLDL 216
GSL + G R LG A +GL YLHS + +++ D K N+LL
Sbjct: 169 GGSLGQLVKEQGCLPED------RALYYLGQALEGLEYLHSRR--ILHGDVKADNVLLSS 220
Query: 217 N-YNAKLSDFG----LAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGV 271
+ +A L DFG L DG G + GT + APE + AK DV+S
Sbjct: 221 DGSHAALCDFGHAVCLQPDG-LGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCC 279
Query: 272 VLLEMLSG 279
++L ML+G
Sbjct: 280 MMLHMLNG 287
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 30/218 (13%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 28 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 74
Query: 135 NLVKLIGYCL-----EDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
N+V+L + +D+ L LV +++P+ + A P+ + L
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 132
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGTY 247
+ LAY+HS + +RD K N+LLD + KL DFG AK G + +VS + +
Sbjct: 133 FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX--ICSR 187
Query: 248 GYAAPEYM--ATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
Y APE + AT + T+ DV+S G VL E+L G+ +
Sbjct: 188 YYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIF 224
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 103/248 (41%), Gaps = 38/248 (15%)
Query: 43 PRTEGE--ILLGSNIKSFSFN---GLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPA 97
P+TE +LL +K + + AT R LG G FG V + +++
Sbjct: 48 PKTEDNEGVLLTEKLKPVDYEYREEVHWATHQLR----LGRGSFGEVHR--MEDKQ---- 97
Query: 98 RPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMP 157
TG AVK++ E + E+ L P +V L G E + E +
Sbjct: 98 ---TGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLE 149
Query: 158 KGSLENHLFRTGASYIQPLSWTIRMKVALGAA-KGLAYLHSDKAKVIYRDFKTSNILLDL 216
GSL + G R LG A +GL YLHS + +++ D K N+LL
Sbjct: 150 GGSLGQLVKEQGCLPED------RALYYLGQALEGLEYLHSRR--ILHGDVKADNVLLSS 201
Query: 217 N-YNAKLSDFG----LAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGV 271
+ +A L DFG L DG G + GT + APE + AK DV+S
Sbjct: 202 DGSHAALCDFGHAVCLQPDG-LGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCC 260
Query: 272 VLLEMLSG 279
++L ML+G
Sbjct: 261 MMLHMLNG 268
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 25/155 (16%)
Query: 137 VKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLS--WTIRMKVALGAAKGLA 193
+ + Y +DD+ L LV ++ G L L + + ++ + M +A+ + L
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH 195
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFG----LAKDGPTGSQSHVSTRVMGTYGY 249
Y+H RD K NIL+D+N + +L+DFG L +DG QS V+ +GT Y
Sbjct: 196 YVH--------RDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV--QSSVA---VGTPDY 242
Query: 250 AAPEYMAT-----GHLTAKSDVYSFGVVLLEMLSG 279
+PE + G + D +S GV + EML G
Sbjct: 243 ISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLSG 279
APE + D++S GV++ EM+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 106/259 (40%), Gaps = 49/259 (18%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTE-------IKH 127
V+G+G F V + E TG AVK ++ TE I H
Sbjct: 31 VIGKGAFSVVRRCINRE---------TGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH 81
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLF-RTGASYIQPLSWTIRMKVAL 186
+ L HP++V+L+ D +V+EFM L + R A ++ S +
Sbjct: 82 M--LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFV--YSEAVASHYMR 137
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA---KLSDFGLAKDGPTGSQSHVSTRV 243
+ L Y H + +I+RD K N+LL N+ KL DFG+A G V+
Sbjct: 138 QILEALRYCHDNN--IIHRDVKPENVLLASKENSAPVKLGDFGVAIQ--LGESGLVAGGR 193
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQ 303
+GT + APE + DV+ GV+L +LSG P+
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG------------------CLPFYG 235
Query: 304 SKRRIFQVMDARIEGQYSL 322
+K R+F+ + I+G+Y +
Sbjct: 236 TKERLFEGI---IKGKYKM 251
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLSG 279
APE + D++S GV++ EM+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 31/184 (16%)
Query: 174 QPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGL------ 227
Q + I K+A+ K L +LHS K VI+RD K SN+L++ K DFG+
Sbjct: 131 QTIPEDILGKIAVSIVKALEHLHS-KLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVD 189
Query: 228 --AKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDK 285
AKD G + + + + PE G+ + KSD++S G+ +E+ R D
Sbjct: 190 DVAKDIDAGCKPYXAPERIN------PELNQKGY-SVKSDIWSLGITXIELAILRFPYDS 242
Query: 286 NRPSREHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPT 345
W P+ Q K+ + + ++S T+ +CL K RPT
Sbjct: 243 -----------WGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTS----QCLKKNSKERPT 287
Query: 346 MDEV 349
E+
Sbjct: 288 YPEL 291
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 72/159 (45%), Gaps = 13/159 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI + L HPN+V+ L H +V E+ G L + G + +
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 124
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLN--YNAKLSDFGLAKDGPTGSQSHVST 241
++ G++Y H+ +V +RD K N LLD + K++DFG +K SQ +
Sbjct: 125 IS-----GVSYAHA--MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA- 176
Query: 242 RVMGTYGYAAPEYMATGHLTAK-SDVYSFGVVLLEMLSG 279
+GT Y APE + K +DV+S GV L ML G
Sbjct: 177 --VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 30/218 (13%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 31 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 77
Query: 135 NLVKLIGYCL-----EDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGA 188
N+V+L + +D+ L LV +++P+ + A P+ + L
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 135
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGTY 247
+ LAY+HS + +RD K N+LLD + KL DFG AK G + +VS + +
Sbjct: 136 FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX--ICSR 190
Query: 248 GYAAPEYM--ATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
Y APE + AT + T+ DV+S G VL E+L G+ +
Sbjct: 191 YYRAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIF 227
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 86/209 (41%), Gaps = 23/209 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG--HLEWLTEIKHLGQLYH 133
LG+G F V + + G A K +N + L H + E + L H
Sbjct: 30 LGKGAFSVVRRC---------VKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 80
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
PN+V+L E+ H L+++ + G L + S I+ + A
Sbjct: 81 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE-------A 133
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
LH + V++RD K N+LL KL+DFGLA + Q+ GT GY
Sbjct: 134 VLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--FAGTPGYL 191
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+PE + D+++ GV+L +L G
Sbjct: 192 SPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 129/326 (39%), Gaps = 52/326 (15%)
Query: 52 GSNIKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN 111
G + F ++ R VL EGGF V Y G+G A+KRL
Sbjct: 12 GRDQSDFVGQTVELGELRLRVRRVLAEGGFAFV---------YEAQDVGSGREYALKRLL 62
Query: 112 QESLQGHLEWLTEIKHLGQLY-HPNLVKL-----IGYCLED--DHRLLVYEFMPKGSLEN 163
+ + + E+ + +L HPN+V+ IG D L+ + KG L
Sbjct: 63 SNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVE 122
Query: 164 HLFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLS 223
L + + PLS +K+ + + ++H K +I+RD K N+LL KL
Sbjct: 123 FLKKMESR--GPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLC 180
Query: 224 DFGLA---KDGPTGSQSHVSTRVM-------GTYGYAAPEYM---ATGHLTAKSDVYSFG 270
DFG A P S S ++ T Y PE + + + K D+++ G
Sbjct: 181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALG 240
Query: 271 VVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAV 330
+L + R+H + AK + + + D QY++ +L A+
Sbjct: 241 CILYLLC-----------FRQHPFEDGAKLRIVNGKYSIPPHDT----QYTVFHSLIRAM 285
Query: 331 LAIKCLSNEPKFRPTMDEVVKALEQI 356
L + P+ R ++ EVV L++I
Sbjct: 286 LQVN-----PEERLSIAEVVHQLQEI 306
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 15/181 (8%)
Query: 102 GMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL 161
M+I K+L S + H + E + L HPN+V+L E+ H L+++ + G L
Sbjct: 41 AMIINTKKL---SARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL 97
Query: 162 ENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN-- 219
+ Y + ++ L A LH + V++R+ K N+LL
Sbjct: 98 FEDI--VAREYYSEADASHCIQQILEAV-----LHCHQMGVVHRNLKPENLLLASKLKGA 150
Query: 220 -AKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
KL+DFGLA + Q+ GT GY +PE + D+++ GV+L +L
Sbjct: 151 AVKLADFGLAIEVEGEQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV 208
Query: 279 G 279
G
Sbjct: 209 G 209
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 73
Query: 135 NLVKLIGYCLED-DHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL---GAAK 190
N+V+L + + + +VY + + ++R Y + + V L +
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGTYGY 249
LAY+HS + +RD K N+LLD + KL DFG AK G + +VS + + Y
Sbjct: 134 SLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX--ICSRYY 188
Query: 250 AAPEYM--ATGHLTAKSDVYSFGVVLLEMLSGRRVI 283
APE + AT + T+ DV+S G VL E+L G+ +
Sbjct: 189 RAPELIFGATDY-TSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 70 FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLG 129
F +S LG G V++ + GT A+K L + + + TEI L
Sbjct: 55 FEVESELGRGATSIVYRC---------KQKGTQKPYALKVLKKTVDKKIVR--TEIGVLL 103
Query: 130 QLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAA 189
+L HPN++KL LV E + G L + + G Y +K L A
Sbjct: 104 RLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKG--YYSERDAADAVKQILEA- 160
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDL---NYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
+AYLH + +++RD K N+L + K++DFGL+K + V GT
Sbjct: 161 --VAYLHENG--IVHRDLKPENLLYATPAPDAPLKIADFGLSK---IVEHQVLMKTVCGT 213
Query: 247 YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GY APE + + D++S G++ +L G
Sbjct: 214 PGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 17/163 (10%)
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRM 182
TEI+ L +L HP ++K+ + +D+ +V E M G L + + G ++ + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKV--VGNKRLKEATCKLYF 120
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILL---DLNYNAKLSDFGLAKDGPTGSQSHV 239
L A + YLH + +I+RD K N+LL + + K++DFG +K G S +
Sbjct: 121 YQMLLAVQ---YLHEN--GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLM 173
Query: 240 STRVMGTYGYAAPEYMA---TGHLTAKSDVYSFGVVLLEMLSG 279
T + GT Y APE + T D +S GV+L LSG
Sbjct: 174 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 17/163 (10%)
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRM 182
TEI+ L +L HP ++K+ + +D+ +V E M G L + + G ++ + +
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKV--VGNKRLKEATCKLYF 245
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILL---DLNYNAKLSDFGLAKDGPTGSQSHV 239
L A + YLH + +I+RD K N+LL + + K++DFG +K G S +
Sbjct: 246 YQMLLAVQ---YLHEN--GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLM 298
Query: 240 STRVMGTYGYAAPEYMA---TGHLTAKSDVYSFGVVLLEMLSG 279
T + GT Y APE + T D +S GV+L LSG
Sbjct: 299 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 17/163 (10%)
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRM 182
TEI+ L +L HP ++K+ + +D+ +V E M G L + + G ++ + +
Sbjct: 63 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKV--VGNKRLKEATCKLYF 119
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILL---DLNYNAKLSDFGLAKDGPTGSQSHV 239
L A + YLH + +I+RD K N+LL + + K++DFG +K G S +
Sbjct: 120 YQMLLAVQ---YLHEN--GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLM 172
Query: 240 STRVMGTYGYAAPEYMA---TGHLTAKSDVYSFGVVLLEMLSG 279
T + GT Y APE + T D +S GV+L LSG
Sbjct: 173 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 17/163 (10%)
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRM 182
TEI+ L +L HP ++K+ + +D+ +V E M G L + + G ++ + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKV--VGNKRLKEATCKLYF 120
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILL---DLNYNAKLSDFGLAKDGPTGSQSHV 239
L A + YLH + +I+RD K N+LL + + K++DFG +K G S +
Sbjct: 121 YQMLLAVQ---YLHEN--GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLM 173
Query: 240 STRVMGTYGYAAPEYMA---TGHLTAKSDVYSFGVVLLEMLSG 279
T + GT Y APE + T D +S GV+L LSG
Sbjct: 174 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 39/219 (17%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG VF+ + E +A+K++ Q+ + E++ + + HP
Sbjct: 47 VIGNGSFGVVFQAKLVESDE----------VAIKKVLQDKRFKN----RELQIMRIVKHP 92
Query: 135 NLVKLIGYCL-----EDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKV---- 184
N+V L + +D+ L LV E++P+ ++R Y + L T+ M +
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYVPET-----VYRASRHYAK-LKQTMPMLLIKLY 146
Query: 185 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRV 243
+ LAY+HS + +RD K N+LLD KL DFG AK G + +VS
Sbjct: 147 MYQLLRSLAYIHS--IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG-EPNVSX-- 201
Query: 244 MGTYGYAAPEYM--ATGHLTAKSDVYSFGVVLLEMLSGR 280
+ + Y APE + AT + T D++S G V+ E++ G+
Sbjct: 202 ICSRYYRAPELIFGATNY-TTNIDIWSTGCVMAELMQGQ 239
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 17/163 (10%)
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRM 182
TEI+ L +L HP ++K+ + +D+ +V E M G L + + G ++ + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKV--VGNKRLKEATCKLYF 120
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILL---DLNYNAKLSDFGLAKDGPTGSQSHV 239
L A + YLH + +I+RD K N+LL + + K++DFG +K G S +
Sbjct: 121 YQMLLAVQ---YLHEN--GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLM 173
Query: 240 STRVMGTYGYAAPEYMA---TGHLTAKSDVYSFGVVLLEMLSG 279
T + GT Y APE + T D +S GV+L LSG
Sbjct: 174 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 139 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 193
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLSG 279
APE + D++S G ++ EM+ G
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 17/163 (10%)
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRM 182
TEI+ L +L HP ++K+ + +D+ +V E M G L + + G ++ + +
Sbjct: 70 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKV--VGNKRLKEATCKLYF 126
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILL---DLNYNAKLSDFGLAKDGPTGSQSHV 239
L A + YLH + +I+RD K N+LL + + K++DFG +K G S +
Sbjct: 127 YQMLLAVQ---YLHEN--GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLM 179
Query: 240 STRVMGTYGYAAPEYMA---TGHLTAKSDVYSFGVVLLEMLSG 279
T + GT Y APE + T D +S GV+L LSG
Sbjct: 180 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 100 GTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKG 159
T M AVK +++ S + E + + GQ HPN++ L + H LV E M G
Sbjct: 50 ATNMEYAVKVIDK-SKRDPSEEIEILLRYGQ--HPNIITLKDVYDDGKHVYLVTELMRGG 106
Query: 160 SLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNIL-LDLNY 218
L + + R + S+ + K + YLHS V++RD K SNIL +D +
Sbjct: 107 ELLDKILRQKFFSEREASFVLHT-----IGKTVEYLHSQG--VVHRDLKPSNILYVDESG 159
Query: 219 NA---KLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLE 275
N ++ DFG AK +++ + T + APE + D++S G++L
Sbjct: 160 NPECLRICDFGFAKQ--LRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYT 217
Query: 276 MLSG 279
ML+G
Sbjct: 218 MLAG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLSG 279
APE + D++S G ++ EM+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLSG 279
APE + D++S G ++ EM+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 17/163 (10%)
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRM 182
TEI+ L +L HP ++K+ + +D+ +V E M G L + + G ++ + +
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKV--VGNKRLKEATCKLYF 259
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILL---DLNYNAKLSDFGLAKDGPTGSQSHV 239
L A + YLH + +I+RD K N+LL + + K++DFG +K G S +
Sbjct: 260 YQMLLAVQ---YLHEN--GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLM 312
Query: 240 STRVMGTYGYAAPEYMA---TGHLTAKSDVYSFGVVLLEMLSG 279
T + GT Y APE + T D +S GV+L LSG
Sbjct: 313 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 130/313 (41%), Gaps = 71/313 (22%)
Query: 73 DSVLGEGGFG-CVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQL 131
+ +LG G G VF+G RP +AVKR+ + L EIK L +
Sbjct: 20 EKILGYGSSGTVVFQGSFQ------GRP-----VAVKRMLIDFCDIAL---MEIKLLTES 65
Query: 132 Y-HPNLVKLIGYCLEDDHRLL----------VYEFMPKGSLENHLFRTGASYIQPLSWTI 180
HPN+++ YC E R L + + + ++ + + Y P+S
Sbjct: 66 DDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY-NPISLLR 122
Query: 181 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL-------------NYNAKLSDFGL 227
++ A G+A+LHS K+I+RD K NIL+ N +SDFGL
Sbjct: 123 QI------ASGVAHLHS--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 228 AKDGPTGSQSHVST--RVMGTYGYAAPEYMATGH-------LTAKSDVYSFGVVLLEMLS 278
K +G GT G+ APE + + LT D++S G V +LS
Sbjct: 175 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 279 GRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSN 338
+ ++ SRE N+I R IF + + + SL A + L + + +
Sbjct: 235 KGKHPFGDKYSRESNII----------RGIFSLDEMKCLHDRSLIA--EATDLISQMIDH 282
Query: 339 EPKFRPTMDEVVK 351
+P RPT +V++
Sbjct: 283 DPLKRPTAMKVLR 295
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLSG 279
APE + D++S G ++ EM+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 37/223 (16%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLYH 133
+LG+G VF+G TG + A+K N S ++ + E + L +L H
Sbjct: 16 ILGQGATANVFRG---------RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH 66
Query: 134 PNLVKLIGYCLEDD----HRLLVYEFMPKGSLENHLFRTGASYIQPLS-WTIRMKVALGA 188
N+VKL + +E++ H++L+ EF P GSL L +Y P S + I ++ +G
Sbjct: 67 KNIVKL--FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA----KLSDFGLAKDGPTGSQSHVSTRVM 244
H + +++R+ K NI+ + + KL+DFG A++ Q +
Sbjct: 125 MN-----HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ---FVXLY 176
Query: 245 GTYGYAAPEYMATGHLT--------AKSDVYSFGVVLLEMLSG 279
GT Y P+ L A D++S GV +G
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 89/214 (41%), Gaps = 29/214 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG------HLEWLTEIKHLG 129
LG G F V K + GTG A K + + L E E+ L
Sbjct: 13 LGSGQFAIVRKC---------RQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63
Query: 130 QLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAA 189
++ HPN++ L +L+ E + G L + L + L+ +
Sbjct: 64 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK-----ESLTEDEATQFLKQIL 118
Query: 190 KGLAYLHSDKAKVIYRDFKTSNI-LLDLNY---NAKLSDFGLAKDGPTGSQSHVSTRVMG 245
G+ YLHS ++ + D K NI LLD N KL DFG+A G++ + G
Sbjct: 119 DGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFG 173
Query: 246 TYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
T + APE + L ++D++S GV+ +LSG
Sbjct: 174 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLSG 279
APE + D++S G ++ EM+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPEVVTRYYR 192
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLSG 279
APE + D++S G ++ EM+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T + + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TACTNFMMTPYVVTRYYR 192
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLSG 279
APE + A D++S G ++ E++ G
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 37/223 (16%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLYH 133
+LG+G VF+G TG + A+K N S ++ + E + L +L H
Sbjct: 16 ILGQGATANVFRG---------RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH 66
Query: 134 PNLVKLIGYCLEDD----HRLLVYEFMPKGSLENHLFRTGASYIQPLS-WTIRMKVALGA 188
N+VKL + +E++ H++L+ EF P GSL L +Y P S + I ++ +G
Sbjct: 67 KNIVKL--FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124
Query: 189 AKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA----KLSDFGLAKDGPTGSQSHVSTRVM 244
H + +++R+ K NI+ + + KL+DFG A++ Q +
Sbjct: 125 MN-----HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ---FVSLY 176
Query: 245 GTYGYAAPEYMATGHLT--------AKSDVYSFGVVLLEMLSG 279
GT Y P+ L A D++S GV +G
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLSG 279
APE + D++S G ++ EM+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLSG 279
APE + D++S G ++ EM+ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 100 GTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKG 159
T M AVK +++ S + E + + GQ HPN++ L + + +V E M G
Sbjct: 45 ATNMEFAVKIIDK-SKRDPTEEIEILLRYGQ--HPNIITLKDVYDDGKYVYVVTELMKGG 101
Query: 160 SLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNIL-LDLNY 218
L + + R + S V K + YLH+ V++RD K SNIL +D +
Sbjct: 102 ELLDKILRQ-----KFFSEREASAVLFTITKTVEYLHAQG--VVHRDLKPSNILYVDESG 154
Query: 219 N---AKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLE 275
N ++ DFG AK +++ + T + APE + A D++S GV+L
Sbjct: 155 NPESIRICDFGFAKQ--LRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYT 212
Query: 276 MLSG 279
ML+G
Sbjct: 213 MLTG 216
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + + T Y
Sbjct: 140 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMVPFVVTRYYR 194
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLSG 279
APE + D++S G ++ EM+ G
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 89/214 (41%), Gaps = 29/214 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG------HLEWLTEIKHLG 129
LG G F V K + GTG A K + + L E E+ L
Sbjct: 20 LGSGQFAIVRKC---------RQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 70
Query: 130 QLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAA 189
++ HPN++ L +L+ E + G L + L + L+ +
Sbjct: 71 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK-----ESLTEDEATQFLKQIL 125
Query: 190 KGLAYLHSDKAKVIYRDFKTSNI-LLDLNY---NAKLSDFGLAKDGPTGSQSHVSTRVMG 245
G+ YLHS ++ + D K NI LLD N KL DFG+A G++ + G
Sbjct: 126 DGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFG 180
Query: 246 TYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
T + APE + L ++D++S GV+ +LSG
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 13/159 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI + L HPN+V+ L H +V E+ G L + G + +
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 124
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLN--YNAKLSDFGLAKDGPTGSQSHVST 241
++ G++Y H+ +V +RD K N LLD + K+ FG +K SQ +
Sbjct: 125 IS-----GVSYCHA--MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST- 176
Query: 242 RVMGTYGYAAPEYMATGHLTAK-SDVYSFGVVLLEMLSG 279
+GT Y APE + K +DV+S GV L ML G
Sbjct: 177 --VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 89/214 (41%), Gaps = 29/214 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG------HLEWLTEIKHLG 129
LG G F V K + GTG A K + + L E E+ L
Sbjct: 34 LGSGQFAIVRKC---------RQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILR 84
Query: 130 QLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAA 189
++ HPN++ L +L+ E + G L + L + L+ +
Sbjct: 85 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK-----ESLTEDEATQFLKQIL 139
Query: 190 KGLAYLHSDKAKVIYRDFKTSNI-LLDLNY---NAKLSDFGLAKDGPTGSQSHVSTRVMG 245
G+ YLHS ++ + D K NI LLD N KL DFG+A G++ + G
Sbjct: 140 DGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFG 194
Query: 246 TYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
T + APE + L ++D++S GV+ +LSG
Sbjct: 195 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 96/234 (41%), Gaps = 30/234 (12%)
Query: 56 KSFSFNGLKTATR---NFRPDSVLGEGGFG----CVFKGWIDEHTYAPARPGTGMVIAVK 108
++ F + T TR +++ LG+G F CV K P + +I K
Sbjct: 16 ENLYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKK--------TPTQEYAAKIINTK 67
Query: 109 RLNQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRT 168
+L S + H + E + L HPN+V+L E+ LV++ + G L +
Sbjct: 68 KL---SARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI--V 122
Query: 169 GASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDF 225
Y + + L + H + +++RD K N+LL KL+DF
Sbjct: 123 AREYYSEADASHCIHQILESVN-----HIHQHDIVHRDLKPENLLLASKCKGAAVKLADF 177
Query: 226 GLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
GLA + Q+ GT GY +PE + D+++ GV+L +L G
Sbjct: 178 GLAIEVQGEQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
EI + L HPN+V+ L H +V E+ G L + G + +
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 124
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLN--YNAKLSDFGLAKDGPTGSQSHVST 241
++ G++Y H+ +V +RD K N LLD + K+ FG +K SQ
Sbjct: 125 IS-----GVSYCHA--MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQ---PK 174
Query: 242 RVMGTYGYAAPEYMATGHLTAK-SDVYSFGVVLLEMLSG 279
+GT Y APE + K +DV+S GV L ML G
Sbjct: 175 DTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 139 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 193
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEML------SGRRVIDK 285
APE + D++S G ++ EM+ GR ID+
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 234
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + + T + T Y
Sbjct: 136 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYYR 190
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLSGRRV 282
APE + D++S G ++ E++ G +
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKGSVI 222
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 137 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 191
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEML------SGRRVIDK 285
APE + D++S G ++ EM+ GR ID+
Sbjct: 192 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 232
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 131 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 185
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEML------SGRRVIDK 285
APE + D++S G ++ EM+ GR ID+
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 226
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 176 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 230
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEML------SGRRVIDK 285
APE + D++S G ++ EM+ GR ID+
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 271
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEML------SGRRVIDK 285
APE + D++S G ++ EM+ GR ID+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEML------SGRRVIDK 285
APE + D++S G ++ EM+ GR ID+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 132 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 186
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEML------SGRRVIDK 285
APE + D++S G ++ EM+ GR ID+
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 227
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 132 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 186
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEML------SGRRVIDK 285
APE + D++S G ++ EM+ GR ID+
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 227
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEML------SGRRVIDK 285
APE + D++S G ++ EM+ GR ID+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 131 GIKHLHS--AGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 185
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEML------SGRRVIDK 285
APE + D++S G ++ EM+ GR ID+
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 226
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEML------SGRRVIDK 285
APE + D++S G ++ EM+ GR ID+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 139 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 193
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEML------SGRRVIDK 285
APE + D++S G ++ EM+ GR ID+
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 234
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 176 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 230
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEML------SGRRVIDK 285
APE + D++S G ++ EM+ GR ID+
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 271
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E+ L ++ HPN++ L +L+ E + G L + F + T +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLK 121
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNI-LLDLNY---NAKLSDFGLAKDGPTGSQSHV 239
L G+ YLHS ++ + D K NI LLD N K+ DFGLA G++
Sbjct: 122 QILN---GVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 --NIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEML------SGRRVIDK 285
APE + D++S G ++ EM+ GR ID+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEML------SGRRVIDK 285
APE + D++S G ++ EM+ GR ID+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 143 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 197
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLS------GRRVIDK 285
APE + D++S G ++ EM+ GR ID+
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ 238
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 108/266 (40%), Gaps = 56/266 (21%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 15 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 133 ------HPNLVKLIGYCLEDDHRLLVYEFM-PKGSLENHLFRTGA---SYIQPLSWTIRM 182
+++L+ + D +L+ E M P L + + GA + W +
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQV-- 123
Query: 183 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDGPTGSQSH 238
L A + H V++RD K NIL+DLN KL DFG L KD
Sbjct: 124 ---LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------- 168
Query: 239 VSTRVMGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR------------RVIDK 285
V T GT Y+ PE++ +S V+S G++L +M+ G +V +
Sbjct: 169 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 228
Query: 286 NRPSRE-HNLIEWAKPYLQSKRRIFQ 310
R S E +LI W S R F+
Sbjct: 229 QRVSSECQHLIRWCLALRPSDRPTFE 254
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 132 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 186
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLS------GRRVIDK 285
APE + D++S G ++ EM+ GR ID+
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ 227
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 92/213 (43%), Gaps = 25/213 (11%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
++F+ S LG G +G VFK E G + AVKR + +G + ++
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKE---------DGRLYAVKR-SMSPFRGPKDRARKLAE 106
Query: 128 LGQL----YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
+G HP V+L E+ L + + SL+ H GAS + W
Sbjct: 107 VGSHEKVGQHPCCVRL-EQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRD 165
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 243
L LA+LHS +++ D K +NI L KL DFGL + T V
Sbjct: 166 TLLA----LAHLHSQG--LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE-- 217
Query: 244 MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEM 276
G Y APE + + TA +DV+S G+ +LE+
Sbjct: 218 -GDPRYMAPELLQGSYGTA-ADVFSLGLTILEV 248
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 80/185 (43%), Gaps = 20/185 (10%)
Query: 101 TGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGS 160
TG AVK++ E + + E+ L P +V L G E + E + GS
Sbjct: 82 TGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGS 136
Query: 161 LENHLFRTGASYIQPLSWTIRMKVALGAA-KGLAYLHSDKAKVIYRDFKTSNILLDLN-Y 218
L + + G R LG A +GL YLH+ + +++ D K N+LL +
Sbjct: 137 LGQLIKQMGCLPED------RALYYLGQALEGLEYLHTRR--ILHGDVKADNVLLSSDGS 188
Query: 219 NAKLSDFG----LAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLL 274
A L DFG L DG G + GT + APE + AK D++S ++L
Sbjct: 189 RAALCDFGHALCLQPDG-LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMML 247
Query: 275 EMLSG 279
ML+G
Sbjct: 248 HMLNG 252
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 80/185 (43%), Gaps = 20/185 (10%)
Query: 101 TGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGS 160
TG AVK++ E + + E+ L P +V L G E + E + GS
Sbjct: 96 TGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGS 150
Query: 161 LENHLFRTGASYIQPLSWTIRMKVALGAA-KGLAYLHSDKAKVIYRDFKTSNILLDLN-Y 218
L + + G R LG A +GL YLH+ + +++ D K N+LL +
Sbjct: 151 LGQLIKQMGCLPED------RALYYLGQALEGLEYLHTRR--ILHGDVKADNVLLSSDGS 202
Query: 219 NAKLSDFG----LAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLL 274
A L DFG L DG G + GT + APE + AK D++S ++L
Sbjct: 203 RAALCDFGHALCLQPDG-LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMML 261
Query: 275 EMLSG 279
ML+G
Sbjct: 262 HMLNG 266
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 80/185 (43%), Gaps = 20/185 (10%)
Query: 101 TGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGS 160
TG AVK++ E + + E+ L P +V L G E + E + GS
Sbjct: 98 TGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGS 152
Query: 161 LENHLFRTGASYIQPLSWTIRMKVALGAA-KGLAYLHSDKAKVIYRDFKTSNILLDLN-Y 218
L + + G R LG A +GL YLH+ + +++ D K N+LL +
Sbjct: 153 LGQLIKQMGCLPED------RALYYLGQALEGLEYLHTRR--ILHGDVKADNVLLSSDGS 204
Query: 219 NAKLSDFG----LAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLL 274
A L DFG L DG G + GT + APE + AK D++S ++L
Sbjct: 205 RAALCDFGHALCLQPDG-LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMML 263
Query: 275 EMLSG 279
ML+G
Sbjct: 264 HMLNG 268
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 65 TATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL----NQESLQGHLE 120
T+ +R + LGEG +G V+K ID T +A+KR+ +E + G
Sbjct: 31 TSIDRYRRITKLGEGTYGEVYKA-IDT--------VTNETVAIKRIRLEHEEEGVPGTA- 80
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRTGASYIQPLSWT 179
+ E+ L +L H N+++L + +HRL L++E+ + L+ ++ + +S
Sbjct: 81 -IREVSLLKELQHRNIIEL-KSVIHHNHRLHLIFEYA-ENDLKKYMDKNPD-----VSMR 132
Query: 180 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-----KLSDFGLAKDGPTG 234
+ G+ + HS + ++RD K N+LL ++ + K+ DFGLA+ G
Sbjct: 133 VIKSFLYQLINGVNFCHSRRC--LHRDLKPQNLLLSVSDASETPVLKIGDFGLAR--AFG 188
Query: 235 SQSHVSTRVMGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEML 277
T + T Y PE + + H + D++S + EML
Sbjct: 189 IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 118/271 (43%), Gaps = 42/271 (15%)
Query: 57 SFSFNGLKTATR--NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES 114
S + +G +R + +P LG GG G VF ++ +A+K++
Sbjct: 1 SMNIHGFDLGSRYMDLKP---LGCGGNGLVFSAVDND---------CDKRVAIKKIVLTD 48
Query: 115 LQGHLEWLTEIKHLGQLYHPNLVKL--------------IGYCLEDDHRLLVYEFMPKGS 160
Q L EIK + +L H N+VK+ +G E + +V E+M +
Sbjct: 49 PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETD 107
Query: 161 LENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL-NYN 219
L N L + PL +GL Y+HS A V++RD K +N+ ++ +
Sbjct: 108 LANVLEQG------PLLEEHARLFMYQLLRGLKYIHS--ANVLHRDLKPANLFINTEDLV 159
Query: 220 AKLSDFGLAK--DGPTGSQSHVSTRVMGTYGYAAPEYMAT-GHLTAKSDVYSFGVVLLEM 276
K+ DFGLA+ D + H+S ++ T Y +P + + + T D+++ G + EM
Sbjct: 160 LKIGDFGLARIMDPHYSHKGHLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEM 218
Query: 277 LSGRRVIDKNRPSREHNLIEWAKPYLQSKRR 307
L+G+ + + LI + P + + R
Sbjct: 219 LTGKTLFAGAHELEQMQLILESIPVVHEEDR 249
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E+ L ++ HPN++ L +L+ E + G L + F + T +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLK 121
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNI-LLDLNY---NAKLSDFGLAKDGPTGSQSHV 239
L G+ YLHS ++ + D K NI LLD N K+ DFGLA G++
Sbjct: 122 QILN---GVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E+ L ++ HPN++ L +L+ E + G L + F + T +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLK 121
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNI-LLDLNY---NAKLSDFGLAKDGPTGSQSHV 239
L G+ YLHS ++ + D K NI LLD N K+ DFGLA G++
Sbjct: 122 QILN---GVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E+ L ++ HPN++ L +L+ E + G L + F + T +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLK 121
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNI-LLDLNY---NAKLSDFGLAKDGPTGSQSHV 239
L G+ YLHS ++ + D K NI LLD N K+ DFGLA G++
Sbjct: 122 QILN---GVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 15/181 (8%)
Query: 104 VIAVKRLNQESLQGHLEWLT----EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKG 159
++A+K L E+L + T E + G+L P++V + + E D +L V + G
Sbjct: 61 IVALK-LXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFG-EIDGQLYVDXRLING 118
Query: 160 -SLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY 218
L L R G PL+ VA+ G A + A +RD K NIL+ +
Sbjct: 119 VDLAAXLRRQG-----PLAPP--RAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADD 171
Query: 219 NAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLS 278
A L DFG+A + + V GT Y APE + H T ++D+Y+ VL E L+
Sbjct: 172 FAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYRADIYALTCVLYECLT 230
Query: 279 G 279
G
Sbjct: 231 G 231
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E+ L Q+ H N++ L +L+ E + G L + L + + + + I+
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ- 123
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNI-LLDLNY---NAKLSDFGLAKDGPTGSQSHV 239
G+ YLH+ K+ + D K NI LLD N + KL DFGLA + G +
Sbjct: 124 ----ILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF-- 175
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E+ L ++ HPN++ L +L+ E + G L + F + T +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLK 121
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNI-LLDLNY---NAKLSDFGLAKDGPTGSQSHV 239
L G+ YLHS ++ + D K NI LLD N K+ DFGLA G++
Sbjct: 122 QILN---GVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E+ L ++ HPN++ L +L+ E + G L + F + T +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLK 121
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNI-LLDLNY---NAKLSDFGLAKDGPTGSQSHV 239
L G+ YLHS ++ + D K NI LLD N K+ DFGLA G++
Sbjct: 122 QILN---GVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E+ L ++ HPN++ L +L+ E + G L + F + T +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLK 121
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNI-LLDLNY---NAKLSDFGLAKDGPTGSQSHV 239
L G+ YLHS ++ + D K NI LLD N K+ DFGLA G++
Sbjct: 122 QILN---GVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E+ L ++ HPN++ L +L+ E + G L + F + T +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLK 121
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNI-LLDLNY---NAKLSDFGLAKDGPTGSQSHV 239
L G+ YLHS ++ + D K NI LLD N K+ DFGLA G++
Sbjct: 122 QILN---GVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E+ L ++ HPN++ L +L+ E + G L + F + T +K
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLK 120
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNI-LLDLNY---NAKLSDFGLAKDGPTGSQSHV 239
L G+ YLHS ++ + D K NI LLD N K+ DFGLA G++
Sbjct: 121 QILN---GVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 174
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 175 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E+ L Q+ H N++ L +L+ E + G L + L + + + + I+
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ- 123
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNI-LLDLNY---NAKLSDFGLAKDGPTGSQSHV 239
G+ YLH+ K+ + D K NI LLD N + KL DFGLA + G +
Sbjct: 124 ----ILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF-- 175
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E+ L ++ HPN++ L +L+ E + G L + F + T +K
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLK 120
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNI-LLDLNY---NAKLSDFGLAKDGPTGSQSHV 239
L G+ YLHS ++ + D K NI LLD N K+ DFGLA G++
Sbjct: 121 QILN---GVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 174
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 175 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ G+ + V+ Y Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRY-YR 192
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLS------GRRVIDK 285
APE + D++S G ++ EM+ GR ID+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQ 233
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E+ L Q+ H N++ L +L+ E + G L + L + + + + I+
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ- 123
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNI-LLDLNY---NAKLSDFGLAKDGPTGSQSHV 239
G+ YLH+ K+ + D K NI LLD N + KL DFGLA + G +
Sbjct: 124 ----ILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF-- 175
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E+ L ++ HPN++ L +L+ E + G L + F + T +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLK 121
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNI-LLDLNY---NAKLSDFGLAKDGPTGSQSHV 239
L G+ YLHS ++ + D K NI LLD N K+ DFGLA G++
Sbjct: 122 QILN---GVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 23/209 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG--HLEWLTEIKHLGQLYH 133
+G+G F V + + TG A K +N + L H + E + L H
Sbjct: 12 IGKGAFSVVRRC---------VKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
N+V+L E+ LV++ + G L + Y + ++ L A
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDI--VAREYYSEADASHCIQQILEAV---- 116
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
LH + V++RD K N+LL KL+DFGLA + Q+ GT GY
Sbjct: 117 -LHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYL 173
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+PE + D+++ GV+L +L G
Sbjct: 174 SPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E+ L ++ HPN++ L +L+ E + G L + F + T +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLK 121
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNI-LLDLNY---NAKLSDFGLAKDGPTGSQSHV 239
L G+ YLHS ++ + D K NI LLD N K+ DFGLA G++
Sbjct: 122 QILN---GVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E+ L Q+ H N++ L +L+ E + G L + L + + + + I+
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ- 123
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNI-LLDLNY---NAKLSDFGLAKDGPTGSQSHV 239
G+ YLH+ K+ + D K NI LLD N + KL DFGLA + G +
Sbjct: 124 ----ILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF-- 175
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E+ L Q+ H N++ L +L+ E + G L + L + + + + I+
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNI-LLDLNY---NAKLSDFGLAKDGPTGSQSHV 239
+ G+ YLH+ K+ + D K NI LLD N + KL DFGLA + G +
Sbjct: 125 L-----DGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF-- 175
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E+ L ++ HPN++ L +L+ E + G L + F + T +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLK 121
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNI-LLDLNY---NAKLSDFGLAKDGPTGSQSHV 239
L G+ YLHS ++ + D K NI LLD N K+ DFGLA G++
Sbjct: 122 QILN---GVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 12/106 (11%)
Query: 182 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGL--AKDGPTGSQSHV 239
+ + + A+ + +LHS +++RD K SNI ++ K+ DFGL A D Q+ +
Sbjct: 167 LHIFIQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 240 STRV--------MGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEML 277
+ +GT Y +PE + + + K D++S G++L E+L
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 69 NFRPDSVLGEGGFGCVF--KGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIK 126
+F P +G GGFG VF K +D+ YA R + + + L +E + + E+K
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKR----IRLPNRELAREKV------MREVK 56
Query: 127 HLGQLYHPNLVKLIGYCLE 145
L +L HP +V+ LE
Sbjct: 57 ALAKLEHPGIVRYFNAWLE 75
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 96/230 (41%), Gaps = 42/230 (18%)
Query: 68 RNFRPDSVLGEGGFG--CVFKGWIDEHTYAPARPGTGMVI-----AVKRLNQESL-QGHL 119
+F V+G G FG V K E YA ++ A R ++ L G
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 133
Query: 120 EWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLS-- 177
+W+T + + Q +++H LV ++ G L L + + ++
Sbjct: 134 QWITALHYAFQ--------------DENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARF 179
Query: 178 WTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFG--LAKDGPTGS 235
+ M +A+ + L Y+H RD K N+LLD+N + +L+DFG L +
Sbjct: 180 YIGEMVLAIDSIHQLHYVH--------RDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTV 231
Query: 236 QSHVSTRVMGTYGYAAPEYM-----ATGHLTAKSDVYSFGVVLLEMLSGR 280
QS V+ +GT Y +PE + G + D +S GV + EML G
Sbjct: 232 QSSVA---VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 104/235 (44%), Gaps = 26/235 (11%)
Query: 74 SVLGEGG----FGCVFKGWIDEHTYAPAR-PGTGMVIAVKRLNQESLQGHL-EWLTEIKH 127
S L EGG + KG+ D T AR TG + V+R+N E+ + +L H
Sbjct: 3 SFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELH 62
Query: 128 LGQLY-HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
+ +L+ HPN+V + D+ +V FM GS ++ + + L+ ++
Sbjct: 63 VSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQ--- 119
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLS----DFGLAKDGPTGSQSH---- 238
G K L Y+H ++R K S+IL+ ++ LS + + G H
Sbjct: 120 GVLKALDYIH--HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPK 177
Query: 239 VSTRVMGTYGYAAPEYMATGH--LTAKSDVYSFGVVLLEMLSGRRVIDKNRPSRE 291
S +V+ + +PE + AKSD+YS G+ E+ +G V K+ P+ +
Sbjct: 178 YSVKVLP---WLSPEVLQQNLQGYDAKSDIYSVGITACELANG-HVPFKDMPATQ 228
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 96/230 (41%), Gaps = 42/230 (18%)
Query: 68 RNFRPDSVLGEGGFG--CVFKGWIDEHTYAPARPGTGMVI-----AVKRLNQESL-QGHL 119
+F V+G G FG V K E YA ++ A R ++ L G
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 149
Query: 120 EWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLS-- 177
+W+T + + Q +++H LV ++ G L L + + ++
Sbjct: 150 QWITALHYAFQ--------------DENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARF 195
Query: 178 WTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFG--LAKDGPTGS 235
+ M +A+ + L Y+H RD K N+LLD+N + +L+DFG L +
Sbjct: 196 YIGEMVLAIDSIHQLHYVH--------RDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTV 247
Query: 236 QSHVSTRVMGTYGYAAPEYM-----ATGHLTAKSDVYSFGVVLLEMLSGR 280
QS V+ +GT Y +PE + G + D +S GV + EML G
Sbjct: 248 QSSVA---VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 104/235 (44%), Gaps = 26/235 (11%)
Query: 74 SVLGEGG----FGCVFKGWIDEHTYAPAR-PGTGMVIAVKRLNQESLQGHL-EWLTEIKH 127
S L EGG + KG+ D T AR TG + V+R+N E+ + +L H
Sbjct: 19 SFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELH 78
Query: 128 LGQLY-HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVAL 186
+ +L+ HPN+V + D+ +V FM GS ++ + + L+ ++
Sbjct: 79 VSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQ--- 135
Query: 187 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLS----DFGLAKDGPTGSQSH---- 238
G K L Y+H ++R K S+IL+ ++ LS + + G H
Sbjct: 136 GVLKALDYIH--HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPK 193
Query: 239 VSTRVMGTYGYAAPEYMATGH--LTAKSDVYSFGVVLLEMLSGRRVIDKNRPSRE 291
S +V+ + +PE + AKSD+YS G+ E+ +G V K+ P+ +
Sbjct: 194 YSVKVLP---WLSPEVLQQNLQGYDAKSDIYSVGITACELANG-HVPFKDMPATQ 244
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 191 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ G+ + V+ Y Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRY-YR 192
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLS------GRRVIDK 285
APE + D++S G ++ EM+ GR ID+
Sbjct: 193 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ 233
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 108/273 (39%), Gaps = 70/273 (25%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 30 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 133 ------HPNLVKLIGYCLEDDHRLLVYE-----------FMPKGSLENHLFRTGASYIQP 175
+++L+ + D +L+ E +G+L+ L R+
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------- 133
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDG 231
W + L A + H V++RD K NIL+DLN KL DFG L KD
Sbjct: 134 FFWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 183
Query: 232 PTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR---------- 280
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 184 -------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 236
Query: 281 --RVIDKNRPSRE-HNLIEWAKPYLQSKRRIFQ 310
+V + R S E +LI W S R F+
Sbjct: 237 RGQVFFRQRVSSECQHLIRWCLALRPSDRPTFE 269
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 108/273 (39%), Gaps = 70/273 (25%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 30 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 133 ------HPNLVKLIGYCLEDDHRLLVYE-----------FMPKGSLENHLFRTGASYIQP 175
+++L+ + D +L+ E +G+L+ L R+
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------- 133
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDG 231
W + L A + H V++RD K NIL+DLN KL DFG L KD
Sbjct: 134 FFWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 183
Query: 232 PTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR---------- 280
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 184 -------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 236
Query: 281 --RVIDKNRPSRE-HNLIEWAKPYLQSKRRIFQ 310
+V + R S E +LI W S R F+
Sbjct: 237 RGQVFFRQRVSXECQHLIRWCLALRPSDRPTFE 269
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 106/257 (41%), Gaps = 55/257 (21%)
Query: 56 KSFSFNGLKTA--TRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ- 112
++ F G+K N+ ++G G +G V+ + T +A+K++N+
Sbjct: 12 ENLYFQGIKNVHVPDNYIIKHLIGRGSYGYVYLAY---------DKNTEKNVAIKKVNRM 62
Query: 113 -ESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDD----HRLLVYEFMPKGSLENHLFR 167
E L L EI L +L +++L + DD L + + L+ LF+
Sbjct: 63 FEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKK-LFK 121
Query: 168 TGASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGL 227
T + TI + LG ++H ++ +I+RD K +N LL+ + + K+ DFGL
Sbjct: 122 TPIFLTEEHIKTILYNLLLGEN----FIH--ESGIIHRDLKPANCLLNQDCSVKVCDFGL 175
Query: 228 AKD-------------------GPTGSQ------SHVSTRVMGTYGYAAPEYMATGHLTA 262
A+ GP SHV TR Y APE +
Sbjct: 176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTR-----WYRAPELILLQENYT 230
Query: 263 KS-DVYSFGVVLLEMLS 278
KS D++S G + E+L+
Sbjct: 231 KSIDIWSTGCIFAELLN 247
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMK 183
E+ L ++ HPN++ L +L+ E + G L + F + T +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFD--FLAEKESLTEEEATEFLK 121
Query: 184 VALGAAKGLAYLHSDKAKVIYRDFKTSNI-LLDLNY---NAKLSDFGLAKDGPTGSQSHV 239
L G+ YLHS ++ + D K NI LLD N K+ DFGLA G++
Sbjct: 122 QILN---GVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 240 STRVMGTYGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+ GT + APE + L ++D++S GV+ +LSG
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 108/273 (39%), Gaps = 70/273 (25%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 133 ------HPNLVKLIGYCLEDDHRLLVYE-----------FMPKGSLENHLFRTGASYIQP 175
+++L+ + D +L+ E +G+L+ L R+
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------- 134
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDG 231
W + L A + H V++RD K NIL+DLN KL DFG L KD
Sbjct: 135 FFWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 184
Query: 232 PTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR---------- 280
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 185 -------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 237
Query: 281 --RVIDKNRPSRE-HNLIEWAKPYLQSKRRIFQ 310
+V + R S E +LI W S R F+
Sbjct: 238 RGQVFFRQRVSSECQHLIRWCLALRPSDRPTFE 270
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 108/273 (39%), Gaps = 70/273 (25%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 133 ------HPNLVKLIGYCLEDDHRLLVYE-----------FMPKGSLENHLFRTGASYIQP 175
+++L+ + D +L+ E +G+L+ L R+
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------- 134
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDG 231
W + L A + H V++RD K NIL+DLN KL DFG L KD
Sbjct: 135 FFWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 184
Query: 232 PTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR---------- 280
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 185 -------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 237
Query: 281 --RVIDKNRPSRE-HNLIEWAKPYLQSKRRIFQ 310
+V + R S E +LI W S R F+
Sbjct: 238 RGQVFFRQRVSXECQHLIRWCLALRPSDRPTFE 270
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 108/273 (39%), Gaps = 70/273 (25%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 133 ------HPNLVKLIGYCLEDDHRLLVYE-----------FMPKGSLENHLFRTGASYIQP 175
+++L+ + D +L+ E +G+L+ L R+
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------- 147
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDG 231
W + L A + H V++RD K NIL+DLN KL DFG L KD
Sbjct: 148 FFWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
Query: 232 PTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR---------- 280
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 198 -------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250
Query: 281 --RVIDKNRPSRE-HNLIEWAKPYLQSKRRIFQ 310
+V + R S E +LI W S R F+
Sbjct: 251 GGQVFFRQRVSSECQHLIRWCLALRPSDRPTFE 283
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 108/273 (39%), Gaps = 70/273 (25%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 58 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 133 ------HPNLVKLIGYCLEDDHRLLVYE-----------FMPKGSLENHLFRTGASYIQP 175
+++L+ + D +L+ E +G+L+ L R+
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------- 161
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDG 231
W + L A + H V++RD K NIL+DLN KL DFG L KD
Sbjct: 162 FFWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 211
Query: 232 PTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR---------- 280
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 212 -------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 264
Query: 281 --RVIDKNRPSRE-HNLIEWAKPYLQSKRRIFQ 310
+V + R S E +LI W S R F+
Sbjct: 265 RGQVFFRQRVSSECQHLIRWCLALRPSDRPTFE 297
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 108/273 (39%), Gaps = 70/273 (25%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 133 ------HPNLVKLIGYCLEDDHRLLVYE-----------FMPKGSLENHLFRTGASYIQP 175
+++L+ + D +L+ E +G+L+ L R+
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------- 147
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDG 231
W + L A + H V++RD K NIL+DLN KL DFG L KD
Sbjct: 148 FFWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
Query: 232 PTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR---------- 280
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 198 -------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250
Query: 281 --RVIDKNRPSRE-HNLIEWAKPYLQSKRRIFQ 310
+V + R S E +LI W S R F+
Sbjct: 251 GGQVFFRQRVSSECQHLIRWCLALRPSDRPTFE 283
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 108/273 (39%), Gaps = 70/273 (25%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 133 ------HPNLVKLIGYCLEDDHRLLVYE-----------FMPKGSLENHLFRTGASYIQP 175
+++L+ + D +L+ E +G+L+ L R+
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------- 119
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDG 231
W + L A + H V++RD K NIL+DLN KL DFG L KD
Sbjct: 120 FFWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 169
Query: 232 PTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR---------- 280
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 170 -------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 222
Query: 281 --RVIDKNRPSRE-HNLIEWAKPYLQSKRRIFQ 310
+V + R S E +LI W S R F+
Sbjct: 223 RGQVFFRQRVSSECQHLIRWCLALRPSDRPTFE 255
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 108/273 (39%), Gaps = 70/273 (25%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 133 ------HPNLVKLIGYCLEDDHRLLVYE-----------FMPKGSLENHLFRTGASYIQP 175
+++L+ + D +L+ E +G+L+ L R+
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------- 147
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDG 231
W + L A + H V++RD K NIL+DLN KL DFG L KD
Sbjct: 148 FFWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
Query: 232 PTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR---------- 280
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 198 -------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250
Query: 281 --RVIDKNRPSRE-HNLIEWAKPYLQSKRRIFQ 310
+V + R S E +LI W S R F+
Sbjct: 251 GGQVFFRQRVSXECQHLIRWCLALRPSDRPTFE 283
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 108/273 (39%), Gaps = 70/273 (25%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 133 ------HPNLVKLIGYCLEDDHRLLVYE-----------FMPKGSLENHLFRTGASYIQP 175
+++L+ + D +L+ E +G+L+ L R+
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------- 119
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDG 231
W + L A + H V++RD K NIL+DLN KL DFG L KD
Sbjct: 120 FFWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 169
Query: 232 PTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR---------- 280
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 170 -------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 222
Query: 281 --RVIDKNRPSRE-HNLIEWAKPYLQSKRRIFQ 310
+V + R S E +LI W S R F+
Sbjct: 223 RGQVFFRQRVSSECQHLIRWCLALRPSDRPTFE 255
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 108/273 (39%), Gaps = 70/273 (25%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 50 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 100
Query: 133 ------HPNLVKLIGYCLEDDHRLLVYE-----------FMPKGSLENHLFRTGASYIQP 175
+++L+ + D +L+ E +G+L+ L R+
Sbjct: 101 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------- 153
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDG 231
W + L A + H V++RD K NIL+DLN KL DFG L KD
Sbjct: 154 FFWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 203
Query: 232 PTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR---------- 280
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 204 -------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 256
Query: 281 --RVIDKNRPSRE-HNLIEWAKPYLQSKRRIFQ 310
+V + R S E +LI W S R F+
Sbjct: 257 RGQVFFRQRVSSECQHLIRWCLALRPSDRPTFE 289
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 108/273 (39%), Gaps = 70/273 (25%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 133 ------HPNLVKLIGYCLEDDHRLLVYE-----------FMPKGSLENHLFRTGASYIQP 175
+++L+ + D +L+ E +G+L+ L R+
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------- 146
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDG 231
W + L A + H V++RD K NIL+DLN KL DFG L KD
Sbjct: 147 FFWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 196
Query: 232 PTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR---------- 280
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 197 -------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 249
Query: 281 --RVIDKNRPSRE-HNLIEWAKPYLQSKRRIFQ 310
+V + R S E +LI W S R F+
Sbjct: 250 RGQVFFRQRVSSECQHLIRWCLALRPSDRPTFE 282
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 108/273 (39%), Gaps = 70/273 (25%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 133 ------HPNLVKLIGYCLEDDHRLLVYE-----------FMPKGSLENHLFRTGASYIQP 175
+++L+ + D +L+ E +G+L+ L R+
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------- 147
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDG 231
W + L A + H V++RD K NIL+DLN KL DFG L KD
Sbjct: 148 FFWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
Query: 232 PTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR---------- 280
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 198 -------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250
Query: 281 --RVIDKNRPSRE-HNLIEWAKPYLQSKRRIFQ 310
+V + R S E +LI W S R F+
Sbjct: 251 GGQVFFRQRVSXECQHLIRWCLALRPSDRPTFE 283
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 108/273 (39%), Gaps = 70/273 (25%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 58 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 133 ------HPNLVKLIGYCLEDDHRLLVYE-----------FMPKGSLENHLFRTGASYIQP 175
+++L+ + D +L+ E +G+L+ L R+
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------- 161
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDG 231
W + L A + H V++RD K NIL+DLN KL DFG L KD
Sbjct: 162 FFWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 211
Query: 232 PTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR---------- 280
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 212 -------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 264
Query: 281 --RVIDKNRPSRE-HNLIEWAKPYLQSKRRIFQ 310
+V + R S E +LI W S R F+
Sbjct: 265 RGQVFFRQRVSXECQHLIRWCLALRPSDRPTFE 297
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 108/273 (39%), Gaps = 70/273 (25%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 133 ------HPNLVKLIGYCLEDDHRLLVYE-----------FMPKGSLENHLFRTGASYIQP 175
+++L+ + D +L+ E +G+L+ L R+
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------- 146
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDG 231
W + L A + H V++RD K NIL+DLN KL DFG L KD
Sbjct: 147 FFWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 196
Query: 232 PTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR---------- 280
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 197 -------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 249
Query: 281 --RVIDKNRPSRE-HNLIEWAKPYLQSKRRIFQ 310
+V + R S E +LI W S R F+
Sbjct: 250 GGQVFFRQRVSSECQHLIRWCLALRPSDRPTFE 282
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 108/273 (39%), Gaps = 70/273 (25%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 15 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 133 ------HPNLVKLIGYCLEDDHRLLVYE-----------FMPKGSLENHLFRTGASYIQP 175
+++L+ + D +L+ E +G+L+ L R+
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------- 118
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDG 231
W + L A + H V++RD K NIL+DLN KL DFG L KD
Sbjct: 119 FFWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 168
Query: 232 PTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR---------- 280
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 169 -------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 221
Query: 281 --RVIDKNRPSRE-HNLIEWAKPYLQSKRRIFQ 310
+V + R S E +LI W S R F+
Sbjct: 222 RGQVFFRQRVSSECQHLIRWCLALRPSDRPTFE 254
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 85/209 (40%), Gaps = 23/209 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG--HLEWLTEIKHLGQLYH 133
LG+G F V + + TG A K +N + L H + E + L H
Sbjct: 12 LGKGAFSVVRRC---------MKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
PN+V+L E+ LV++ + G L + Y + ++ L +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDI--VAREYYSEADASHCIQQILESVN--- 117
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
H +++RD K N+LL KL+DFGLA + Q+ GT GY
Sbjct: 118 --HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYL 173
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+PE + D+++ GV+L +L G
Sbjct: 174 SPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 108/273 (39%), Gaps = 70/273 (25%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 133 ------HPNLVKLIGYCLEDDHRLLVYE-----------FMPKGSLENHLFRTGASYIQP 175
+++L+ + D +L+ E +G+L+ L R+
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------- 146
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDG 231
W + L A + H V++RD K NIL+DLN KL DFG L KD
Sbjct: 147 FFWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 196
Query: 232 PTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR---------- 280
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 197 -------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 249
Query: 281 --RVIDKNRPSRE-HNLIEWAKPYLQSKRRIFQ 310
+V + R S E +LI W S R F+
Sbjct: 250 GGQVFFRQRVSSECQHLIRWCLALRPSDRPTFE 282
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 108/273 (39%), Gaps = 70/273 (25%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 63 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 113
Query: 133 ------HPNLVKLIGYCLEDDHRLLVYE-----------FMPKGSLENHLFRTGASYIQP 175
+++L+ + D +L+ E +G+L+ L R+
Sbjct: 114 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------- 166
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDG 231
W + L A + H V++RD K NIL+DLN KL DFG L KD
Sbjct: 167 FFWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 216
Query: 232 PTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR---------- 280
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 217 -------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 269
Query: 281 --RVIDKNRPSRE-HNLIEWAKPYLQSKRRIFQ 310
+V + R S E +LI W S R F+
Sbjct: 270 RGQVFFRQRVSXECQHLIRWCLALRPSDRPTFE 302
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 108/273 (39%), Gaps = 70/273 (25%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 133 ------HPNLVKLIGYCLEDDHRLLVYE-----------FMPKGSLENHLFRTGASYIQP 175
+++L+ + D +L+ E +G+L+ L R+
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------- 146
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDG 231
W + L A + H V++RD K NIL+DLN KL DFG L KD
Sbjct: 147 FFWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 196
Query: 232 PTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR---------- 280
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 197 -------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 249
Query: 281 --RVIDKNRPSRE-HNLIEWAKPYLQSKRRIFQ 310
+V + R S E +LI W S R F+
Sbjct: 250 GGQVFFRQRVSXECQHLIRWCLALRPSDRPTFE 282
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 108/273 (39%), Gaps = 70/273 (25%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 133 ------HPNLVKLIGYCLEDDHRLLVYE-----------FMPKGSLENHLFRTGASYIQP 175
+++L+ + D +L+ E +G+L+ L R+
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------- 119
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDG 231
W + L A + H V++RD K NIL+DLN KL DFG L KD
Sbjct: 120 FFWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 169
Query: 232 PTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR---------- 280
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 170 -------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 222
Query: 281 --RVIDKNRPSRE-HNLIEWAKPYLQSKRRIFQ 310
+V + R S E +LI W S R F+
Sbjct: 223 RGQVFFRQRVSSECQHLIRWCLALRPSDRPTFE 255
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 60/136 (44%), Gaps = 25/136 (18%)
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDGPTGSQSHVSTRVMGTYG 248
A H V++RD K NIL+DLN KL DFG L KD V T GT
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRV 221
Query: 249 YAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR------------RVIDKNRPSRE-HNL 294
Y+ PE++ +S V+S G++L +M+ G +V + R S E +L
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 281
Query: 295 IEWAKPYLQSKRRIFQ 310
I W S R F+
Sbjct: 282 IRWCLALRPSDRPTFE 297
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 60/136 (44%), Gaps = 25/136 (18%)
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDGPTGSQSHVSTRVMGTYG 248
A H V++RD K NIL+DLN KL DFG L KD V T GT
Sbjct: 149 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRV 201
Query: 249 YAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR------------RVIDKNRPSRE-HNL 294
Y+ PE++ +S V+S G++L +M+ G +V + R S E +L
Sbjct: 202 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHL 261
Query: 295 IEWAKPYLQSKRRIFQ 310
I W S R F+
Sbjct: 262 IRWCLALRPSDRPTFE 277
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLF-RTGASYIQPLSWTIRMKVALGAA 189
L HP++V+L+ D +V+EFM L + R A ++ S +
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFV--YSEAVASHYMRQIL 142
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNA---KLSDFGLAKDGPTGSQSHVSTRVMGT 246
+ L Y H + +I+RD K +LL N+ KL FG+A G V+ +GT
Sbjct: 143 EALRYCHDNN--IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRVGT 198
Query: 247 YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKR 306
+ APE + DV+ GV+L +LSG P+ +K
Sbjct: 199 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSG------------------CLPFYGTKE 240
Query: 307 RIFQVMDARIEGQYSL 322
R+F+ + I+G+Y +
Sbjct: 241 RLFEGI---IKGKYKM 253
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 60/136 (44%), Gaps = 25/136 (18%)
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDGPTGSQSHVSTRVMGTYG 248
A H V++RD K NIL+DLN KL DFG L KD V T GT
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRV 174
Query: 249 YAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR------------RVIDKNRPSRE-HNL 294
Y+ PE++ +S V+S G++L +M+ G +V + R S E +L
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHL 234
Query: 295 IEWAKPYLQSKRRIFQ 310
I W S R F+
Sbjct: 235 IRWCLALRPSDRPTFE 250
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 60/136 (44%), Gaps = 25/136 (18%)
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDGPTGSQSHVSTRVMGTYG 248
A H V++RD K NIL+DLN KL DFG L KD V T GT
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRV 174
Query: 249 YAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR------------RVIDKNRPSRE-HNL 294
Y+ PE++ +S V+S G++L +M+ G +V + R S E +L
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 234
Query: 295 IEWAKPYLQSKRRIFQ 310
I W S R F+
Sbjct: 235 IRWCLALRPSDRPTFE 250
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 60/136 (44%), Gaps = 25/136 (18%)
Query: 193 AYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDGPTGSQSHVSTRVMGTYG 248
A H V++RD K NIL+DLN KL DFG L KD V T GT
Sbjct: 125 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRV 177
Query: 249 YAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR------------RVIDKNRPSRE-HNL 294
Y+ PE++ +S V+S G++L +M+ G +V + R S E +L
Sbjct: 178 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 237
Query: 295 IEWAKPYLQSKRRIFQ 310
I W S R F+
Sbjct: 238 IRWCLALRPSDRPTFE 253
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 85/209 (40%), Gaps = 23/209 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG--HLEWLTEIKHLGQLYH 133
LG+G F V + + TG A K +N + L H + E + L H
Sbjct: 12 LGKGAFSVVRRC---------MKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
PN+V+L E+ LV++ + G L + Y + ++ L +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDI--VAREYYSEADASHCIQQILESVN--- 117
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 250
H +++RD K N+LL KL+DFGLA + Q+ GT GY
Sbjct: 118 --HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYL 173
Query: 251 APEYMATGHLTAKSDVYSFGVVLLEMLSG 279
+PE + D+++ GV+L +L G
Sbjct: 174 SPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 119/284 (41%), Gaps = 29/284 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG+G F +FKG E T +++ V L++ + + +L H +
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKV--LDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV G C+ D +LV EF+ GSL+ +L + + I L W +++VA A + +L
Sbjct: 74 LVLNYGVCVCGDENILVQEFVKFGSLDTYL-KKNKNCINIL-W--KLEVAKQLAAAMHFL 129
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR--VMGTYGYAAPE 253
+ +I+ + NILL + K + K G V + + + PE
Sbjct: 130 EEN--TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPE 187
Query: 254 YMAT-GHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVM 312
+ +L +D +SFG L E+ SG ++P L S+R++ Q
Sbjct: 188 CIENPKNLNLATDKWSFGTTLWEICSG-----GDKPLSA----------LDSQRKL-QFY 231
Query: 313 DARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
+ R Q A + A L C+ EP RP+ +++ L +
Sbjct: 232 EDR--HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 31/196 (15%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLF-RTGASYIQPLSWTIRMKVALGAA 189
L HP++V+L+ D +V+EFM L + R A ++ S +
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFV--YSEAVASHYMRQIL 140
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNA---KLSDFGLAKDGPTGSQSHVSTRVMGT 246
+ L Y H + +I+RD K +LL N+ KL FG+A G V+ +GT
Sbjct: 141 EALRYCHDNN--IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRVGT 196
Query: 247 YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKR 306
+ APE + DV+ GV+L +LSG P+ +K
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSG------------------CLPFYGTKE 238
Query: 307 RIFQVMDARIEGQYSL 322
R+F+ + I+G+Y +
Sbjct: 239 RLFEGI---IKGKYKM 251
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 108/273 (39%), Gaps = 70/273 (25%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 11 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 133 ------HPNLVKLIGYCLEDDHRLLVYE-----------FMPKGSLENHLFRTGASYIQP 175
+++L+ + D +L+ E +G+L+ L R+
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------- 114
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDG 231
W + L A + H V++RD K NIL+DLN KL DFG L KD
Sbjct: 115 FFWQV-----LEAVR-----HCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 164
Query: 232 PTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR---------- 280
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 165 -------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 217
Query: 281 --RVIDKNRPSRE-HNLIEWAKPYLQSKRRIFQ 310
+V + R S E +LI W S R F+
Sbjct: 218 RGQVFFRQRVSXECQHLIRWCLALRPSDRPTFE 250
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 124/299 (41%), Gaps = 47/299 (15%)
Query: 75 VLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYH 133
++G+G FG V+ G W H R +I ++R N++ L+ + E+ Q H
Sbjct: 40 LIGKGRFGQVYHGRW---HGEVAIR-----LIDIERDNEDQLKA---FKREVMAYRQTRH 88
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLA 193
N+V +G C+ H L + + KG + R A + ++ T ++A KG+
Sbjct: 89 ENVVLFMGACMSPPH-LAIITSLCKGRTLYSVVRD-AKIVLDVNKT--RQIAQEIVKGMG 144
Query: 194 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPT--GSQSHVSTRVM-GTYGYA 250
YLH+ ++++D K+ N+ D N ++DFGL + R+ G +
Sbjct: 145 YLHA--KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHL 201
Query: 251 APEYMATGH---------LTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPY 301
APE + + SDV++ G + E L R EW
Sbjct: 202 APEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYE-LHAR---------------EWPFKT 245
Query: 302 LQSKRRIFQVMDARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQIQDTN 360
++ I+Q+ +G + + + + C + E + RPT +++ LE++ N
Sbjct: 246 QPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLD---LNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
+ + YLHS + +RD K N+L N KL+DFG AK+ T S + ++T
Sbjct: 132 EAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTP 187
Query: 247 YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
Y Y APE + D++S GV++ +L G
Sbjct: 188 Y-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 219
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 107/273 (39%), Gaps = 70/273 (25%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 133 ------HPNLVKLIGYCLEDDHRLLVYE-----------FMPKGSLENHLFRTGASYIQP 175
+++L+ + D +L+ E +G+L+ L R+
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS------- 134
Query: 176 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY-NAKLSDFG---LAKDG 231
W + L A + H V++RD K NIL+DLN KL DFG L KD
Sbjct: 135 FFWQV-----LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 184
Query: 232 PTGSQSHVSTRVMGTYGYAAPEYMATGHLTAKS-DVYSFGVVLLEMLSGR---------- 280
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 185 -------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 237
Query: 281 --RVIDKNRPSRE-HNLIEWAKPYLQSKRRIFQ 310
+V + R S E +LI W R F+
Sbjct: 238 RGQVFFRQRVSXECQHLIRWCLALRPXDRPTFE 270
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 24/169 (14%)
Query: 122 LTEIKHLGQLYHPNLVKL--IGYCLEDD--HRL-LVYEFMPKG---SLENHLFRTGASYI 173
L EI+ L +HPN++ L I E+ H+L LV E M + + +I
Sbjct: 77 LREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHI 136
Query: 174 QPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGP 232
Q + I + GL LH +A V++RD NILL N + + DF LA+ D
Sbjct: 137 QYFMYHILL--------GLHVLH--EAGVVHRDLHPGNILLADNNDITICDFNLAREDTA 186
Query: 233 TGSQSHVSTRVMGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLSGR 280
+++H T Y APE M T D++S G V+ EM + +
Sbjct: 187 DANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLD---LNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
+ + YLHS + +RD K N+L N KL+DFG AK+ T S + ++T
Sbjct: 134 EAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTP 189
Query: 247 YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
Y Y APE + D++S GV++ +L G
Sbjct: 190 Y-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 221
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 75/167 (44%), Gaps = 24/167 (14%)
Query: 122 LTEIKHLGQLYHPNLVKL--IGYCLEDD--HRL-LVYEFMPKG---SLENHLFRTGASYI 173
L EI+ L +HPN++ L I E+ H+L LV E M + + +I
Sbjct: 77 LREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHI 136
Query: 174 QPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGP 232
Q + I + GL LH +A V++RD NILL N + + DF LA+ D
Sbjct: 137 QYFMYHILL--------GLHVLH--EAGVVHRDLHPGNILLADNNDITICDFNLAREDTA 186
Query: 233 TGSQSHVSTRVMGTYGYAAPE-YMATGHLTAKSDVYSFGVVLLEMLS 278
+++H T Y APE M T D++S G V+ EM +
Sbjct: 187 DANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLD---LNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
+ + YLHS + +RD K N+L N KL+DFG AK+ T S + ++T
Sbjct: 133 EAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTP 188
Query: 247 YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
Y Y APE + D++S GV++ +L G
Sbjct: 189 Y-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 220
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDL---NYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
+ + YLHS + +RD K N+L N KL+DFG AK+ T S + ++T
Sbjct: 172 EAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTP 227
Query: 247 YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
Y Y APE + D++S GV++ +L G
Sbjct: 228 Y-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 118/284 (41%), Gaps = 29/284 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG+G F +FKG E T +++ V L++ + + +L H +
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKV--LDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRTGASYIQPLSWTIRMKVALGAAKGLAYL 195
LV G C D +LV EF+ GSL+ +L + + I L W +++VA A + +L
Sbjct: 74 LVLNYGVCFCGDENILVQEFVKFGSLDTYL-KKNKNCINIL-W--KLEVAKQLAWAMHFL 129
Query: 196 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR--VMGTYGYAAPE 253
+ +I+ + NILL + K + K G V + + + PE
Sbjct: 130 EEN--TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPE 187
Query: 254 YMAT-GHLTAKSDVYSFGVVLLEMLSGRRVIDKNRPSREHNLIEWAKPYLQSKRRIFQVM 312
+ +L +D +SFG L E+ SG ++P L S+R++ Q
Sbjct: 188 CIENPKNLNLATDKWSFGTTLWEICSG-----GDKPLSA----------LDSQRKL-QFY 231
Query: 313 DARIEGQYSLGAALKTAVLAIKCLSNEPKFRPTMDEVVKALEQI 356
+ R Q A + A L C+ EP RP+ +++ L +
Sbjct: 232 EDR--HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 190 KGLAYLHSDKAKVIYRDFKTSNILLDL---NYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 246
+ + YLHS + +RD K N+L N KL+DFG AK+ T S + ++T
Sbjct: 128 EAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTP 183
Query: 247 YGYAAPEYMATGHLTAKSDVYSFGVVLLEMLSG 279
Y Y APE + D++S GV++ +L G
Sbjct: 184 Y-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,262,469
Number of Sequences: 62578
Number of extensions: 514946
Number of successful extensions: 3896
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 233
Number of HSP's that attempted gapping in prelim test: 1316
Number of HSP's gapped (non-prelim): 1215
length of query: 401
length of database: 14,973,337
effective HSP length: 101
effective length of query: 300
effective length of database: 8,652,959
effective search space: 2595887700
effective search space used: 2595887700
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)