Query 015732
Match_columns 401
No_of_seqs 378 out of 2384
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 17:43:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015732.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015732hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lz8_A Putative chaperone DNAJ 100.0 4.1E-66 1.4E-70 507.0 19.8 273 2-343 32-315 (329)
2 1nlt_A Protein YDJ1, mitochond 100.0 5.9E-65 2E-69 481.4 24.1 240 98-339 7-248 (248)
3 3agx_A DNAJ homolog subfamily 100.0 7.7E-48 2.6E-52 347.8 19.6 180 102-344 2-181 (181)
4 2q2g_A HSP40 protein, heat sho 100.0 7.5E-46 2.6E-50 334.6 21.3 178 101-343 2-180 (180)
5 1c3g_A Heat shock protein 40; 100.0 2.5E-42 8.6E-47 308.7 17.2 169 103-339 1-170 (170)
6 1xao_A YDJ1, mitochondrial pro 100.0 5.4E-29 1.8E-33 210.0 13.1 118 248-368 1-120 (121)
7 3i38_A Putative chaperone DNAJ 99.9 3E-26 1E-30 189.6 10.0 95 244-344 2-96 (109)
8 1bq0_A DNAJ, HSP40; chaperone, 99.9 1.9E-23 6.6E-28 171.2 2.9 87 1-87 6-99 (103)
9 2ctt_A DNAJ homolog subfamily 99.8 6.8E-22 2.3E-26 162.3 4.8 102 102-210 1-103 (104)
10 1hdj_A Human HSP40, HDJ-1; mol 99.8 1.5E-21 5.3E-26 151.4 5.4 65 2-66 7-74 (77)
11 2ctr_A DNAJ homolog subfamily 99.8 3E-21 1E-25 153.7 6.1 66 2-67 11-79 (88)
12 2och_A Hypothetical protein DN 99.8 4E-21 1.4E-25 147.5 5.3 61 2-62 12-73 (73)
13 2o37_A Protein SIS1; HSP40, J- 99.8 4.2E-21 1.4E-25 154.0 5.3 65 2-66 12-77 (92)
14 2ej7_A HCG3 gene; HCG3 protein 99.8 5.3E-21 1.8E-25 150.1 4.7 63 2-64 13-80 (82)
15 2dn9_A DNAJ homolog subfamily 99.8 6.7E-21 2.3E-25 148.4 4.9 62 2-63 11-76 (79)
16 2ctp_A DNAJ homolog subfamily 99.8 8.2E-21 2.8E-25 147.6 4.3 62 2-63 11-75 (78)
17 2dmx_A DNAJ homolog subfamily 99.8 9.9E-21 3.4E-25 151.9 4.9 65 2-66 13-82 (92)
18 2cug_A Mkiaa0962 protein; DNAJ 99.8 1.7E-20 5.7E-25 149.3 4.4 61 2-62 21-84 (88)
19 2lgw_A DNAJ homolog subfamily 99.8 1.4E-20 4.7E-25 153.0 3.5 65 2-66 6-75 (99)
20 2ctw_A DNAJ homolog subfamily 99.8 3.5E-20 1.2E-24 153.3 4.7 64 2-65 21-88 (109)
21 2yua_A Williams-beuren syndrom 99.8 6E-20 2.1E-24 149.3 5.9 58 2-59 21-82 (99)
22 2ctq_A DNAJ homolog subfamily 99.8 2.8E-20 9.6E-25 154.6 3.3 64 2-65 24-91 (112)
23 1faf_A Large T antigen; J doma 99.8 8.2E-20 2.8E-24 142.2 3.5 61 2-63 15-77 (79)
24 1gh6_A Large T antigen; tumor 99.8 3.9E-20 1.3E-24 153.8 0.5 60 2-61 12-73 (114)
25 3apq_A DNAJ homolog subfamily 99.8 2.5E-19 8.6E-24 164.2 4.3 82 2-86 6-91 (210)
26 1wjz_A 1700030A21RIK protein; 99.8 1.5E-19 5.2E-24 145.4 2.3 60 2-61 20-89 (94)
27 2pf4_E Small T antigen; PP2A, 99.7 8.6E-20 3E-24 161.9 -0.3 60 2-61 15-76 (174)
28 2qsa_A DNAJ homolog DNJ-2; J-d 99.7 4E-19 1.4E-23 147.0 2.0 60 2-61 19-86 (109)
29 2ys8_A RAB-related GTP-binding 99.7 3.9E-18 1.3E-22 136.1 4.6 54 2-55 31-87 (90)
30 2guz_A Mitochondrial import in 99.7 8E-18 2.7E-22 128.3 4.1 53 2-54 18-71 (71)
31 2l6l_A DNAJ homolog subfamily 99.7 7.3E-18 2.5E-22 148.0 4.5 60 2-61 14-83 (155)
32 1iur_A KIAA0730 protein; DNAJ 99.7 8.9E-18 3E-22 133.2 2.8 55 2-56 20-79 (88)
33 2qwo_B Putative tyrosine-prote 99.6 3.3E-17 1.1E-21 130.5 1.6 48 2-49 37-91 (92)
34 1fpo_A HSC20, chaperone protei 99.6 1.4E-16 4.9E-21 141.8 2.8 59 2-60 5-74 (171)
35 3ag7_A Putative uncharacterize 99.6 1.4E-16 4.9E-21 130.6 1.8 49 2-51 45-104 (106)
36 3hho_A CO-chaperone protein HS 99.6 3.3E-16 1.1E-20 139.8 3.5 58 2-59 8-76 (174)
37 3bvo_A CO-chaperone protein HS 99.6 4.4E-16 1.5E-20 142.6 3.2 57 2-58 47-114 (207)
38 3apo_A DNAJ homolog subfamily 99.6 1.9E-16 6.6E-21 171.6 -0.1 82 2-86 25-110 (780)
39 3uo3_A J-type CO-chaperone JAC 99.5 8.3E-16 2.8E-20 137.9 2.0 58 2-59 15-80 (181)
40 1exk_A DNAJ protein; extended 99.5 3.1E-14 1.1E-18 110.5 7.7 77 119-202 1-78 (79)
41 1nlt_A Protein YDJ1, mitochond 99.1 1.3E-10 4.3E-15 109.4 6.5 52 205-256 190-246 (248)
42 2guz_B Mitochondrial import in 99.0 2.8E-10 9.5E-15 84.5 4.4 48 2-49 8-58 (65)
43 3i38_A Putative chaperone DNAJ 98.9 1.6E-09 5.5E-14 89.0 4.6 52 206-258 40-91 (109)
44 1xao_A YDJ1, mitochondrial pro 98.7 6.8E-09 2.3E-13 86.9 4.3 54 205-258 35-93 (121)
45 1n4c_A Auxilin; four helix bun 98.6 1.8E-08 6.1E-13 89.7 2.7 32 2-33 121-152 (182)
46 1c3g_A Heat shock protein 40; 98.5 1.3E-07 4.3E-12 83.8 7.6 73 255-330 2-82 (170)
47 2q2g_A HSP40 protein, heat sho 98.5 1.4E-07 4.9E-12 84.2 8.0 76 253-331 3-89 (180)
48 3lz8_A Putative chaperone DNAJ 98.5 1.6E-07 5.6E-12 91.6 7.2 76 251-329 138-226 (329)
49 3agx_A DNAJ homolog subfamily 98.4 5.1E-07 1.7E-11 80.7 8.5 75 253-331 2-89 (181)
50 3lcz_A YCZA, inhibitor of trap 97.9 2.7E-06 9.2E-11 60.2 0.7 33 169-203 6-38 (53)
51 1exk_A DNAJ protein; extended 97.6 1.5E-05 5E-10 61.1 1.4 46 127-185 26-77 (79)
52 3pmq_A Decaheme cytochrome C M 97.6 1.2E-06 4.1E-11 92.2 -7.2 78 106-183 168-257 (669)
53 2ctt_A DNAJ homolog subfamily 97.5 4.4E-05 1.5E-09 61.8 2.6 46 128-186 44-95 (104)
54 2bx9_A Anti-trap, AT, tryptoph 96.9 0.00045 1.6E-08 48.7 2.3 26 173-200 10-35 (53)
55 2bx9_A Anti-trap, AT, tryptoph 96.6 0.0011 3.9E-08 46.6 3.0 26 130-157 10-35 (53)
56 3lcz_A YCZA, inhibitor of trap 96.5 0.0015 5.1E-08 46.0 3.0 26 130-157 10-35 (53)
57 2y4t_A DNAJ homolog subfamily 95.4 0.01 3.4E-07 57.9 4.3 33 2-34 386-418 (450)
58 2vl6_A SSO MCM N-TER, minichro 63.3 24 0.00082 32.4 8.3 64 172-242 168-235 (268)
59 3jt0_A Lamin-B1; structural ge 51.3 30 0.001 29.0 6.1 52 267-321 51-102 (144)
60 1ltl_A DNA replication initiat 50.6 69 0.0024 29.5 9.2 15 9-23 8-22 (279)
61 2lll_A Lamin-B2; immunoglobuli 46.2 35 0.0012 28.3 5.7 51 267-320 47-98 (139)
62 3pmq_A Decaheme cytochrome C M 46.0 3.5 0.00012 43.4 -0.6 47 146-199 192-257 (669)
63 2qkd_A Zinc finger protein ZPR 41.9 18 0.0006 35.7 3.7 36 146-181 13-50 (404)
64 3hn9_A Lamin-B1; structural ge 37.5 69 0.0024 25.9 6.1 40 267-307 38-77 (123)
65 2bx2_L Ribonuclease E, RNAse E 35.8 7.7 0.00026 39.5 0.0 31 155-185 390-421 (517)
66 1qo8_A Flavocytochrome C3 fuma 32.6 7.1 0.00024 39.9 -0.9 66 131-198 14-86 (566)
67 1uzc_A Hypothetical protein FL 32.1 34 0.0012 25.0 3.0 52 8-59 10-65 (71)
68 1ufg_A Lamin A, nuclear lamin; 31.4 97 0.0033 26.0 6.2 51 267-320 63-114 (151)
69 2b7e_A PRE-mRNA processing pro 30.1 34 0.0012 24.1 2.6 47 13-59 3-55 (59)
70 1ifr_A Lamin A/C; immunoglobul 29.6 90 0.0031 25.1 5.5 51 267-320 32-83 (121)
71 2rq5_A Protein jumonji; develo 29.0 18 0.00063 29.3 1.2 22 37-58 90-111 (121)
72 3nyb_B Protein AIR2; polya RNA 28.4 26 0.00091 26.4 1.9 54 128-186 4-60 (83)
73 3vdz_A Ubiquitin-40S ribosomal 28.4 57 0.0019 25.5 4.1 40 252-291 14-56 (111)
74 2jrp_A Putative cytoplasmic pr 28.2 94 0.0032 23.3 4.9 54 130-197 3-60 (81)
75 2hcz_X Beta-expansin 1A; domai 26.5 2E+02 0.007 25.9 7.9 27 271-299 210-238 (245)
76 2vf7_A UVRA2, excinuclease ABC 26.4 26 0.00088 37.9 2.1 32 147-182 640-671 (842)
77 1gmu_A UREE; metallochaperone; 25.4 1.1E+02 0.0038 25.2 5.5 45 258-303 16-60 (143)
78 1ny9_A Transcriptional activat 25.3 73 0.0025 26.0 4.4 53 5-61 71-124 (143)
79 1y0p_A Fumarate reductase flav 24.8 12 0.00042 38.1 -0.7 65 131-197 13-88 (571)
80 1sif_A Ubiquitin; hydrophobic 23.7 65 0.0022 23.8 3.4 25 267-291 6-30 (88)
81 3irb_A Uncharacterized protein 22.5 1.4E+02 0.0049 24.5 5.7 22 286-308 119-140 (145)
82 2r6f_A Excinuclease ABC subuni 22.3 42 0.0014 36.9 2.8 32 147-182 755-786 (972)
83 1cf7_A Protein (transcription 22.2 75 0.0026 23.4 3.4 45 8-59 8-52 (76)
84 1ear_A Urease accessory protei 22.0 1.2E+02 0.0041 25.1 5.1 44 259-303 22-65 (147)
85 2ftc_B Mitochondrial ribosomal 22.0 3.3E+02 0.011 22.3 8.6 70 206-291 24-107 (136)
86 2e2z_A TIM15; protein import, 21.6 40 0.0014 26.4 1.8 11 146-156 14-24 (100)
87 2jnz_A PHL P 3 allergen; timot 21.5 3E+02 0.01 21.6 7.2 83 204-299 13-104 (108)
88 1mli_A Muconolactone isomerase 21.5 94 0.0032 24.1 3.9 23 318-340 3-25 (96)
89 2cqn_A Formin-binding protein 20.3 60 0.0021 24.0 2.5 50 11-61 7-63 (77)
No 1
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=100.00 E-value=4.1e-66 Score=506.97 Aligned_cols=273 Identities=27% Similarity=0.405 Sum_probs=158.8
Q ss_pred ceeCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---hHHHHHHHHHHHHhCCccccccccccCccccccCCC-------CC
Q 015732 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMG-------GG 71 (401)
Q Consensus 2 ~iLgv~~~As~~eIKkAYrkla~k~HPDkn~~---~~kFk~I~~AYevLsd~~kR~~YD~~g~~~~~~g~~-------~g 71 (401)
+||||+++||.+|||+|||+||++||||+|++ +++|++|++||+||+||.+|+.||+|+..+...+++ ++
T Consensus 32 ~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~~~~~~~~~ 111 (329)
T 3lz8_A 32 AILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGRQRQTHEQS 111 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCcccccccccCC
Confidence 69999999999999999999999999999975 489999999999999999999999995432211110 11
Q ss_pred CCCCCCccccccccCCCCCCCCCCCcccccCcceEEeEeeeeeeeecCceeeeeeeeeeecCcccCCCCccCCeeeccCC
Q 015732 72 GGAHDPFDIFQSFFGGSPFGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGC 151 (401)
Q Consensus 72 ~~~~~~~d~F~~fFgg~~f~g~~~~~~~~~g~di~~~l~vslee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~~~~C~~C 151 (401)
.++.++.|||++|||+++++ ++.+.+++|.|+.++|.|||+|+|+|+++++.+++.+.|
T Consensus 112 f~~~~f~diF~~~Fg~~g~~--~~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~------------------- 170 (329)
T 3lz8_A 112 YSQQDFDDIFSSMFGQQAHQ--RRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYN------------------- 170 (329)
T ss_dssp ---------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECC-------------------
T ss_pred cCCCchhhhhHhhhcCcCCC--CCCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEeec-------------------
Confidence 11235678999999753221 112335689999999999999999999999999876632
Q ss_pred cccceEEEEEecCCcceeEeEeeCCCCCCcceEEcCCCCCCCcCCccEEEEeEEEEEEEcCCCcCCCEEeccCCcCCCC-
Q 015732 152 QGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAP- 230 (401)
Q Consensus 152 ~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~- 230 (401)
|.|. + ++...+.++|+||||+++|++|+|+|+|++.+
T Consensus 171 -g~G~---------------------------v--------------~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~ 208 (329)
T 3lz8_A 171 -VFGM---------------------------I--------------ESETPKTLNVKIPAGVVDGQRIRLKGQGTPGEN 208 (329)
T ss_dssp -SCC----------------------------C--------------CEEEEEEEEEEECTTCCTTCEEEESSCSCCC--
T ss_pred -CCeE---------------------------E--------------EEecceEEEEeCCCCCCCCCEEEEcccccCCCC
Confidence 1111 0 22335689999999999999999999999964
Q ss_pred CCCcccEEEEEEEeeCCcceecCcceeeeccCCHHHHhCCcEEEEEecCCcEEEEEeCCCccccCCcEEEecCCCCcCCC
Q 015732 231 DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQ 310 (401)
Q Consensus 231 g~~~GDliv~i~~~~h~~f~R~g~dL~~~~~I~l~eAl~G~~~~i~~ldG~~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~ 310 (401)
++.+|||||+|++++|+.|+|+|+||+++++|+|+|||||+++.|+||||+ +.|+||+| ++||++++|+|+|||..
T Consensus 209 gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~-v~l~ip~g--t~~g~~~rl~G~GmP~~- 284 (329)
T 3lz8_A 209 GGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPG--SQAGQRLRIKGKGLVSK- 284 (329)
T ss_dssp -CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTT--CCTTCEEEETTCSCBCS-
T ss_pred CCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCC-EEEEECCC--CCCCCEEEEcCCCCCCC-
Confidence 678999999999999999999999999999999999999999999999998 68999999 79999999999999975
Q ss_pred CCCCCCCEEEEEEEeCCCCCCHHHHHHHHhhCC
Q 015732 311 RPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 343 (401)
Q Consensus 311 ~~~~~GdL~v~~~V~~P~~l~~~~~~~l~~~lp 343 (401)
..+|||||+|+|+||++|+++|+++|+++..
T Consensus 285 --~~rGDL~v~~~V~~P~~l~~~q~~~l~~~~~ 315 (329)
T 3lz8_A 285 --THTGDLFAVIKIVMPTKPDEKARELWQQLAA 315 (329)
T ss_dssp --SCBCCEEEEEEECCCSSCCHHHHHHHHHHHH
T ss_pred --CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 3699999999999999999999999999875
No 2
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=100.00 E-value=5.9e-65 Score=481.41 Aligned_cols=240 Identities=45% Similarity=0.868 Sum_probs=220.3
Q ss_pred ccccCcceEEeEeeeeeeeecCceeeeeeeeeeecCcccCCCCccCCeeeccCCcccceEEEEEecCCcceeEeEeeCCC
Q 015732 98 RQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNE 177 (401)
Q Consensus 98 ~~~~g~di~~~l~vslee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~ 177 (401)
++++|.|+.+.|.|||+|+|+|+++++.+++.+.|+.|+|+|++.++..+|+.|+|+|+++..+++|| |+++++++|+.
T Consensus 7 ~~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~-~~~~~~~~C~~ 85 (248)
T 1nlt_A 7 GPQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGP-MIQRFQTECDV 85 (248)
T ss_dssp -CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSS-EEEEEECSCTT
T ss_pred CCCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCc-eEEEEEEcCCC
Confidence 45689999999999999999999999999999999999999999887789999999999999999999 99999999999
Q ss_pred CCCcceEEcCCCCCCCcCCccEEEEeEEEEEEEcCCCcCCCEEeccCCcCCCCCCCcccEEEEEEEeeCCcceecCccee
Q 015732 178 CKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLF 257 (401)
Q Consensus 178 C~G~G~~~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~g~~~GDliv~i~~~~h~~f~R~g~dL~ 257 (401)
|+|+|+++.++++|+.|+|+|++.+.++++|+|||||++|++|+|+|+|++.+++.+|||||+|++++|+.|+|+|+|||
T Consensus 86 C~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~ 165 (248)
T 1nlt_A 86 CHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLV 165 (248)
T ss_dssp CSSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEE
T ss_pred CCCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEE
Confidence 99999999888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccCCHHHHhCCcEEEEEecCCcEEEEEeCCCccccCCcEEEecCCCCcCCCCCCCCCCEEEEEEEeCCCC--CCHHHH
Q 015732 258 VEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES--LSPDQC 335 (401)
Q Consensus 258 ~~~~I~l~eAl~G~~~~i~~ldG~~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v~~~V~~P~~--l~~~~~ 335 (401)
++++|||+|||+|+++.|+||||+.+.|+||||++++||++++|+|+|||..+++ .+|||||+|+|+||++ ||++|+
T Consensus 166 ~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~~~~Ls~~q~ 244 (248)
T 1nlt_A 166 YEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHFTSEENL 244 (248)
T ss_dssp EEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC---------
T ss_pred EEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCCCCCCCHHHH
Confidence 9999999999999999999999988999999999999999999999999987554 6899999999999999 999998
Q ss_pred HHHH
Q 015732 336 KMLE 339 (401)
Q Consensus 336 ~~l~ 339 (401)
++|+
T Consensus 245 ~~l~ 248 (248)
T 1nlt_A 245 KKLE 248 (248)
T ss_dssp ----
T ss_pred HhhC
Confidence 8875
No 3
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=100.00 E-value=7.7e-48 Score=347.75 Aligned_cols=180 Identities=39% Similarity=0.681 Sum_probs=161.5
Q ss_pred CcceEEeEeeeeeeeecCceeeeeeeeeeecCcccCCCCccCCeeeccCCcccceEEEEEecCCcceeEeEeeCCCCCCc
Q 015732 102 GEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGT 181 (401)
Q Consensus 102 g~di~~~l~vslee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~ 181 (401)
++|+.++|.|||+|+|+|+++++.+++
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~----------------------------------------------------- 28 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISH----------------------------------------------------- 28 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEE-----------------------------------------------------
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEec-----------------------------------------------------
Confidence 468899999999999999999997653
Q ss_pred ceEEcCCCCCCCcCCccEEEEeEEEEEEEcCCCcCCCEEeccCCcCCCCCCCcccEEEEEEEeeCCcceecCcceeeecc
Q 015732 182 GETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHT 261 (401)
Q Consensus 182 G~~~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~g~~~GDliv~i~~~~h~~f~R~g~dL~~~~~ 261 (401)
+|+.|+|+|++.+.++++|+|||||++|++|+|+|+|++.+++.+|||||+|++++|+.|+|+|+|||++++
T Consensus 29 --------~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~ 100 (181)
T 3agx_A 29 --------KRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPAR 100 (181)
T ss_dssp --------EEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSSSCCCCEEEEEEECCCSSCEEETTEEEEEEE
T ss_pred --------ccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCCCCcccEEEEEEEeccccceeeCCcEEEEEE
Confidence 133344444667889999999999999999999999999889999999999999999999999999999999
Q ss_pred CCHHHHhCCcEEEEEecCCcEEEEEeCCCccccCCcEEEecCCCCcCCCCCCCCCCEEEEEEEeCCCCCCHHHHHHHHhh
Q 015732 262 LSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETV 341 (401)
Q Consensus 262 I~l~eAl~G~~~~i~~ldG~~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v~~~V~~P~~l~~~~~~~l~~~ 341 (401)
|||+|||+|+++.|+||||+.+.|++|++ ++||++++|+|+|||..++++.+|||||+|+|.||++||++|+++|+++
T Consensus 101 Isl~eAllG~~i~v~tldG~~~~i~i~~~--t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~ls~~q~~~l~~~ 178 (181)
T 3agx_A 101 ISLREALCGCTVNVPTLDGRTIPVVFKDV--IRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQV 178 (181)
T ss_dssp EEHHHHHHCEEEEEECTTSCEEEEEECSC--CCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSCCCHHHHHHHHHH
T ss_pred cCHHHHhCCCEEEeECCCCCEEEEECCCc--cCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHh
Confidence 99999999999999999999899999987 8999999999999998765567899999999999999999999999999
Q ss_pred CCC
Q 015732 342 LPP 344 (401)
Q Consensus 342 lp~ 344 (401)
||+
T Consensus 179 ~~~ 181 (181)
T 3agx_A 179 LPI 181 (181)
T ss_dssp SCC
T ss_pred ccC
Confidence 973
No 4
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.5e-46 Score=334.57 Aligned_cols=178 Identities=37% Similarity=0.659 Sum_probs=164.9
Q ss_pred cCcceEEeEeeeeeeeecCceeeeeeeeeeecCcccCCCCccCCeeeccCCcccceEEEEEecCCcceeEeEeeCCCCCC
Q 015732 101 RGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKG 180 (401)
Q Consensus 101 ~g~di~~~l~vslee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G 180 (401)
++.|+.+.|.|||+|+|+|+++++.+++.+.|+.
T Consensus 2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~---------------------------------------------- 35 (180)
T 2q2g_A 2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEH---------------------------------------------- 35 (180)
T ss_dssp --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETT----------------------------------------------
T ss_pred CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCC----------------------------------------------
Confidence 3789999999999999999999999999888731
Q ss_pred cceEEcCCCCCCCcCCccEEEEeEEEEEEEcCCCcCCCEEeccCCcCC-CCCCCcccEEEEEEEeeCCcceecCcceeee
Q 015732 181 TGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADE-APDTVTGDIVFVLQQKEHPKFKRKGDDLFVE 259 (401)
Q Consensus 181 ~G~~~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~-~~g~~~GDliv~i~~~~h~~f~R~g~dL~~~ 259 (401)
+++.+.++++|+|||||++|++|+|+|+|++ .+++.+|||||+|++++|+.|+|+|+|||++
T Consensus 36 -----------------g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~ 98 (180)
T 2q2g_A 36 -----------------KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMK 98 (180)
T ss_dssp -----------------EEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEE
T ss_pred -----------------ceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEE
Confidence 2456778999999999999999999999999 7899999999999999999999999999999
Q ss_pred ccCCHHHHhCCcEEEEEecCCcEEEEEeCCCccccCCcEEEecCCCCcCCCCCCCCCCEEEEEEEeCCCCCCHHHHHHHH
Q 015732 260 HTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLE 339 (401)
Q Consensus 260 ~~I~l~eAl~G~~~~i~~ldG~~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v~~~V~~P~~l~~~~~~~l~ 339 (401)
++|||+|||+|+++.|+||||+.+.|++|++ ++||++++|+|+|||..++++.+|||||+|+|.||++||++|+++|+
T Consensus 99 ~~Isl~eAllG~~i~v~tldG~~v~i~ip~~--t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~ 176 (180)
T 2q2g_A 99 VTIPLVRALTGFTCPVTTLDNRNLQIPIKEI--VNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIK 176 (180)
T ss_dssp EEEEHHHHHHCEEEEEECTTCCEEEEEECSC--CCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSCCCHHHHHHHH
T ss_pred EEcCHHHHhCCCEEEeeCCCCCEEEEECCCc--cCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHH
Confidence 9999999999999999999999899999988 89999999999999987656678999999999999999999999999
Q ss_pred hhCC
Q 015732 340 TVLP 343 (401)
Q Consensus 340 ~~lp 343 (401)
++||
T Consensus 177 ~~~p 180 (180)
T 2q2g_A 177 EALD 180 (180)
T ss_dssp HHC-
T ss_pred HhcC
Confidence 9985
No 5
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=100.00 E-value=2.5e-42 Score=308.75 Aligned_cols=169 Identities=36% Similarity=0.582 Sum_probs=153.9
Q ss_pred cceEEeEeeeeeeeecCceeeeeeeeeeecCcccCCCCccCCeeeccCCcccceEEEEEecCCcceeEeEeeCCCCCCcc
Q 015732 103 EDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTG 182 (401)
Q Consensus 103 ~di~~~l~vslee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G 182 (401)
+|+.+.|.|||+|+|+|+++++.+++.. + .
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~~----~------------------~---------------------------- 30 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG----P------------------H---------------------------- 30 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEEE----T------------------T----------------------------
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEec----C------------------C----------------------------
Confidence 4789999999999999999999998651 0 0
Q ss_pred eEEcCCCCCCCcCCccEEEEeEEEEEEEcCCCcCCCEEeccCCcCC-CCCCCcccEEEEEEEeeCCcceecCcceeeecc
Q 015732 183 ETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADE-APDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHT 261 (401)
Q Consensus 183 ~~~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~-~~g~~~GDliv~i~~~~h~~f~R~g~dL~~~~~ 261 (401)
|.+ +.++++|+|||||++|++|+|+|+|++ .+++.+|||||+|++++|+.|+|+|+|||++++
T Consensus 31 ---------------G~~-~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~ 94 (170)
T 1c3g_A 31 ---------------GAS-EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLP 94 (170)
T ss_dssp ---------------TEE-EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEEC
T ss_pred ---------------CcE-EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEE
Confidence 123 678899999999999999999999995 789999999999999999999999999999999
Q ss_pred CCHHHHhCCcEEEEEecCCcEEEEEeCCCccccCCcEEEecCCCCcCCCCCCCCCCEEEEEEEeCCCCCCHHHHHHHH
Q 015732 262 LSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLE 339 (401)
Q Consensus 262 I~l~eAl~G~~~~i~~ldG~~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v~~~V~~P~~l~~~~~~~l~ 339 (401)
|||+|||+|+++.|+||||+.+.|++|++ ++||++++|+|+|||..++++.+|||||+|+|.||++||++|+++|+
T Consensus 95 Isl~eAllG~~~~v~tldG~~~~i~i~~~--t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~ 170 (170)
T 1c3g_A 95 LSFKESLLGFSKTIQTIDGRTLPLSRVQP--VQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID 170 (170)
T ss_dssp CBHHHHHHCEEEEEECSSSCEEEEEESSC--CCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTHHHHTC
T ss_pred cCHHHHhCCCeEEeeCCCCCEEEEECCCc--cCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCCCCCHHHHHhhC
Confidence 99999999999999999998889999988 79999999999999987656678999999999999999999988763
No 6
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.4e-29 Score=210.04 Aligned_cols=118 Identities=37% Similarity=0.596 Sum_probs=101.4
Q ss_pred cceecCcceeeeccCCHHHHhCCcEEEEEecCCcEEEEEeCCCccccCCcEEEecCCCCcCCCCCCCCCCEEEEEEEeCC
Q 015732 248 KFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFP 327 (401)
Q Consensus 248 ~f~R~g~dL~~~~~I~l~eAl~G~~~~i~~ldG~~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v~~~V~~P 327 (401)
.|+|+|+||+++++|||++||+|+++.|+||||+.+.|+||+|++++||++++|+|+|||..+++ .+|||||+|+|.||
T Consensus 1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P 79 (121)
T 1xao_A 1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP 79 (121)
T ss_dssp CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence 49999999999999999999999999999999998999999999999999999999999987554 68999999999999
Q ss_pred CC--CCHHHHHHHHhhCCCCCCCCCccCcccccceeeeccCCh
Q 015732 328 ES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNI 368 (401)
Q Consensus 328 ~~--l~~~~~~~l~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (401)
++ |+++|+++|+++++..+. .. ....+++|++.+.++++
T Consensus 80 ~~~~ls~~q~~~l~~l~~~~~~-~~-~~~~~~~ee~~~~~~~~ 120 (121)
T 1xao_A 80 ENHFTSEENLKKLEEILPPRIV-PA-IPKKATVDECVLADFDP 120 (121)
T ss_dssp CTTCSCHHHHHHHHHHSCCCCC-CC-CCTTSCEEEEECEECCC
T ss_pred CCCCCCHHHHHHHHHHcccccc-cC-CCCCCCceEEEeeccCC
Confidence 99 999999999999987653 11 13346778888888875
No 7
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.93 E-value=3e-26 Score=189.57 Aligned_cols=95 Identities=20% Similarity=0.332 Sum_probs=88.1
Q ss_pred eeCCcceecCcceeeeccCCHHHHhCCcEEEEEecCCcEEEEEeCCCccccCCcEEEecCCCCcCCCCCCCCCCEEEEEE
Q 015732 244 KEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFT 323 (401)
Q Consensus 244 ~~h~~f~R~g~dL~~~~~I~l~eAl~G~~~~i~~ldG~~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v~~~ 323 (401)
++|+.|+|+|+||+++++|||+|||+|+++.|+||||. +.|+||+| ++||++++|+|+|||.. + .+|||||+|+
T Consensus 2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~-~~v~ip~g--~~~G~~~rl~G~G~p~~-~--~~GDL~v~~~ 75 (109)
T 3i38_A 2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPG--SQAGQRLRIKGKGLVSK-T--HTGDLFAVIK 75 (109)
T ss_dssp --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTT--CCTTCEEEETTCSCBCS-S--CBCCEEEEEE
T ss_pred CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCC-EEEeeCCC--cCcCeEEEECCccCCCC-C--CCcCEEEEEE
Confidence 68999999999999999999999999999999999995 89999999 89999999999999973 2 6999999999
Q ss_pred EeCCCCCCHHHHHHHHhhCCC
Q 015732 324 VDFPESLSPDQCKMLETVLPP 344 (401)
Q Consensus 324 V~~P~~l~~~~~~~l~~~lp~ 344 (401)
|.||++|+++|+++|++++..
T Consensus 76 V~~P~~Ls~~q~~~l~~l~~~ 96 (109)
T 3i38_A 76 IVMPTKPDEKARELWQQLAAA 96 (109)
T ss_dssp ECCCSSCCHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHhh
Confidence 999999999999999999853
No 8
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.87 E-value=1.9e-23 Score=171.24 Aligned_cols=87 Identities=45% Similarity=0.785 Sum_probs=62.4
Q ss_pred CceeCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----hHHHHHHHHHHHHhCCccccccccccCccccccCCCCCC---C
Q 015732 1 MRFSESRKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGG---G 73 (401)
Q Consensus 1 ~~iLgv~~~As~~eIKkAYrkla~k~HPDkn~~----~~kFk~I~~AYevLsd~~kR~~YD~~g~~~~~~g~~~g~---~ 73 (401)
.+||||+++||.+|||+|||+||++||||++++ .++|++|++||+||+||.+|+.||++|+.++..+..+++ +
T Consensus 6 y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~~~~~~~~~~ 85 (103)
T 1bq0_A 6 YEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGG 85 (103)
T ss_dssp TTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCSCC--------
T ss_pred HHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcccCcCCCCCCC
Confidence 369999999999999999999999999999974 379999999999999999999999999988875321111 1
Q ss_pred CCCCccccccccCC
Q 015732 74 AHDPFDIFQSFFGG 87 (401)
Q Consensus 74 ~~~~~d~F~~fFgg 87 (401)
+.++.++|+.||+.
T Consensus 86 ~~~~~~~f~~~f~~ 99 (103)
T 1bq0_A 86 GADFSDIFGDVFGD 99 (103)
T ss_dssp --------------
T ss_pred CCCHHHHHHHHHHh
Confidence 23456778888764
No 9
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=6.8e-22 Score=162.27 Aligned_cols=102 Identities=27% Similarity=0.597 Sum_probs=90.5
Q ss_pred CcceEEeEeeeeeeeecCceeeeeeeeeeecCcccCCCCccCCe-eeccCCcccceEEEEEecCCcceeEeEeeCCCCCC
Q 015732 102 GEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGAS-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKG 180 (401)
Q Consensus 102 g~di~~~l~vslee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G 180 (401)
|.++.++|.|||+|+|+|+++++.+.+.+.|+.|+|+|++.+.. .+|+.|+|+|++...+ |+ ++++++|+.|+|
T Consensus 1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~--G~---~~~~~~C~~C~G 75 (104)
T 2ctt_A 1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINT--GP---FVMRSTCRRCGG 75 (104)
T ss_dssp CCCCCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEE--TT---EEEEEECSSSSS
T ss_pred CCceEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEe--CC---EEEEEECCcCCC
Confidence 45788999999999999999999999999999999999988764 7999999999876543 54 346789999999
Q ss_pred cceEEcCCCCCCCcCCccEEEEeEEEEEEE
Q 015732 181 TGETINDKDRCPQCKGEKVIQEKKVLEVIV 210 (401)
Q Consensus 181 ~G~~~~~~~~C~~C~G~g~~~~~~~l~V~I 210 (401)
+|+++. ++|+.|+|.|++.+.++|+|+|
T Consensus 76 ~G~~i~--~~C~~C~G~G~v~~~k~l~V~~ 103 (104)
T 2ctt_A 76 RGSIII--SPCVVCRGAGQAKQKKRSGPSS 103 (104)
T ss_dssp SSEECS--SCCSSSSSCSEECCCCSSCCSC
T ss_pred cceECC--CcCCCCCCeeEEEEEEEEEEEc
Confidence 999985 8999999999999999988875
No 10
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.84 E-value=1.5e-21 Score=151.35 Aligned_cols=65 Identities=52% Similarity=0.925 Sum_probs=61.1
Q ss_pred ceeCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---hHHHHHHHHHHHHhCCccccccccccCcccccc
Q 015732 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKE 66 (401)
Q Consensus 2 ~iLgv~~~As~~eIKkAYrkla~k~HPDkn~~---~~kFk~I~~AYevLsd~~kR~~YD~~g~~~~~~ 66 (401)
+||||+++||.+|||+|||+|+++||||++++ .++|++|++||++|+||.+|+.||++|.+++.+
T Consensus 7 ~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 74 (77)
T 1hdj_A 7 QTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG 74 (77)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccccc
Confidence 68999999999999999999999999999975 489999999999999999999999999987764
No 11
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=3e-21 Score=153.65 Aligned_cols=66 Identities=44% Similarity=0.708 Sum_probs=62.0
Q ss_pred ceeCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---hHHHHHHHHHHHHhCCccccccccccCccccccC
Q 015732 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEG 67 (401)
Q Consensus 2 ~iLgv~~~As~~eIKkAYrkla~k~HPDkn~~---~~kFk~I~~AYevLsd~~kR~~YD~~g~~~~~~g 67 (401)
+||||+++||.+|||+|||+|+++||||++++ .++|++|++||++|+||.+|+.||.+|..++.++
T Consensus 11 ~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~ 79 (88)
T 2ctr_A 11 DILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSG 79 (88)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTCS
T ss_pred HHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccccC
Confidence 68999999999999999999999999999987 3799999999999999999999999999887753
No 12
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.82 E-value=4e-21 Score=147.51 Aligned_cols=61 Identities=57% Similarity=0.869 Sum_probs=57.0
Q ss_pred ceeCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-hHHHHHHHHHHHHhCCccccccccccCcc
Q 015732 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD-PEKFKELAQAYEVLSDPEKREIYDQYGED 62 (401)
Q Consensus 2 ~iLgv~~~As~~eIKkAYrkla~k~HPDkn~~-~~kFk~I~~AYevLsd~~kR~~YD~~g~~ 62 (401)
+||||+++||.+|||+|||+|+++||||++++ .++|++|++||+||+||.+|+.||++|++
T Consensus 12 ~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 73 (73)
T 2och_A 12 DVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQIYDQGGEE 73 (73)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence 68999999999999999999999999999986 59999999999999999999999999863
No 13
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.82 E-value=4.2e-21 Score=154.04 Aligned_cols=65 Identities=54% Similarity=0.894 Sum_probs=61.7
Q ss_pred ceeCCCCCCCHHHHHHHHHHHHHHhCCCCCC-ChHHHHHHHHHHHHhCCccccccccccCcccccc
Q 015732 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGG-DPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE 66 (401)
Q Consensus 2 ~iLgv~~~As~~eIKkAYrkla~k~HPDkn~-~~~kFk~I~~AYevLsd~~kR~~YD~~g~~~~~~ 66 (401)
+||||+++||.+|||+|||+|+++||||+++ ++++|++|++||+||+||.+|+.||++|+.++..
T Consensus 12 ~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~ 77 (92)
T 2o37_A 12 DLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKREIYDQYGLEAARS 77 (92)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHT
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhc
Confidence 6899999999999999999999999999996 4689999999999999999999999999988875
No 14
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.82 E-value=5.3e-21 Score=150.08 Aligned_cols=63 Identities=49% Similarity=0.819 Sum_probs=59.0
Q ss_pred ceeCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-----HHHHHHHHHHHHhCCccccccccccCcccc
Q 015732 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGDP-----EKFKELAQAYEVLSDPEKREIYDQYGEDAL 64 (401)
Q Consensus 2 ~iLgv~~~As~~eIKkAYrkla~k~HPDkn~~~-----~kFk~I~~AYevLsd~~kR~~YD~~g~~~~ 64 (401)
+||||+++||.+|||+|||+|+++||||++++. ++|++|++||++|+||.+|+.||++|+.++
T Consensus 13 ~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 13 EVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp HHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 689999999999999999999999999999862 689999999999999999999999997654
No 15
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.81 E-value=6.7e-21 Score=148.45 Aligned_cols=62 Identities=52% Similarity=0.755 Sum_probs=58.2
Q ss_pred ceeCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----hHHHHHHHHHHHHhCCccccccccccCccc
Q 015732 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDA 63 (401)
Q Consensus 2 ~iLgv~~~As~~eIKkAYrkla~k~HPDkn~~----~~kFk~I~~AYevLsd~~kR~~YD~~g~~~ 63 (401)
+||||+++||.+|||+|||+|+++||||++++ .++|++|++||++|+||.+|+.||++|..+
T Consensus 11 ~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 11 QILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 68999999999999999999999999999974 389999999999999999999999998754
No 16
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=8.2e-21 Score=147.62 Aligned_cols=62 Identities=50% Similarity=0.808 Sum_probs=58.4
Q ss_pred ceeCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---hHHHHHHHHHHHHhCCccccccccccCccc
Q 015732 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD---PEKFKELAQAYEVLSDPEKREIYDQYGEDA 63 (401)
Q Consensus 2 ~iLgv~~~As~~eIKkAYrkla~k~HPDkn~~---~~kFk~I~~AYevLsd~~kR~~YD~~g~~~ 63 (401)
+||||+++||.+|||+|||+|+++||||+++. .++|++|++||+||+||.+|+.||++|..+
T Consensus 11 ~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 11 EILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 68999999999999999999999999999975 389999999999999999999999998754
No 17
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=9.9e-21 Score=151.86 Aligned_cols=65 Identities=48% Similarity=0.746 Sum_probs=60.7
Q ss_pred ceeCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----hHHHHHHHHHHHHhCCccccccccccCcccccc
Q 015732 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKE 66 (401)
Q Consensus 2 ~iLgv~~~As~~eIKkAYrkla~k~HPDkn~~-----~~kFk~I~~AYevLsd~~kR~~YD~~g~~~~~~ 66 (401)
+||||+++||.+|||+|||+|+++||||++++ .++|++|++||+||+||.+|+.||++|..++..
T Consensus 13 ~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 82 (92)
T 2dmx_A 13 EVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRA 82 (92)
T ss_dssp HHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCC
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 68999999999999999999999999999985 279999999999999999999999999877664
No 18
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.80 E-value=1.7e-20 Score=149.31 Aligned_cols=61 Identities=48% Similarity=0.773 Sum_probs=57.8
Q ss_pred ceeCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---hHHHHHHHHHHHHhCCccccccccccCcc
Q 015732 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD---PEKFKELAQAYEVLSDPEKREIYDQYGED 62 (401)
Q Consensus 2 ~iLgv~~~As~~eIKkAYrkla~k~HPDkn~~---~~kFk~I~~AYevLsd~~kR~~YD~~g~~ 62 (401)
+||||+++||.+|||+|||+|+++||||++++ .++|++|++||++|+||.+|+.||++|+.
T Consensus 21 ~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 84 (88)
T 2cug_A 21 RVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSG 84 (88)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTC
T ss_pred HHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCC
Confidence 68999999999999999999999999999975 38999999999999999999999999874
No 19
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.80 E-value=1.4e-20 Score=152.98 Aligned_cols=65 Identities=55% Similarity=0.893 Sum_probs=58.2
Q ss_pred ceeCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----hHHHHHHHHHHHHhCCccccccccccCcccccc
Q 015732 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKE 66 (401)
Q Consensus 2 ~iLgv~~~As~~eIKkAYrkla~k~HPDkn~~-----~~kFk~I~~AYevLsd~~kR~~YD~~g~~~~~~ 66 (401)
+||||+++||.+|||+|||+||++||||++++ .++|++|++||++|+||.+|+.||++|..++.+
T Consensus 6 ~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~ 75 (99)
T 2lgw_A 6 EILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG 75 (99)
T ss_dssp HHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 68999999999999999999999999999985 279999999999999999999999999877664
No 20
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.79 E-value=3.5e-20 Score=153.26 Aligned_cols=64 Identities=50% Similarity=0.778 Sum_probs=60.3
Q ss_pred ceeCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----hHHHHHHHHHHHHhCCccccccccccCccccc
Q 015732 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALK 65 (401)
Q Consensus 2 ~iLgv~~~As~~eIKkAYrkla~k~HPDkn~~----~~kFk~I~~AYevLsd~~kR~~YD~~g~~~~~ 65 (401)
+||||+++||.+|||+|||+||++||||++++ .++|++|++||+||+||.+|+.||++|..++.
T Consensus 21 ~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~ 88 (109)
T 2ctw_A 21 HVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88 (109)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred HHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence 68999999999999999999999999999985 38999999999999999999999999987764
No 21
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=6e-20 Score=149.27 Aligned_cols=58 Identities=31% Similarity=0.515 Sum_probs=55.1
Q ss_pred ceeCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----hHHHHHHHHHHHHhCCcccccccccc
Q 015732 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQY 59 (401)
Q Consensus 2 ~iLgv~~~As~~eIKkAYrkla~k~HPDkn~~----~~kFk~I~~AYevLsd~~kR~~YD~~ 59 (401)
+||||+++||.+|||+|||+||++||||++++ .++|++|++||+||+||.+|+.||++
T Consensus 21 ~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~ 82 (99)
T 2yua_A 21 DLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRG 82 (99)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHT
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHh
Confidence 68999999999999999999999999999974 48999999999999999999999984
No 22
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=2.8e-20 Score=154.63 Aligned_cols=64 Identities=25% Similarity=0.477 Sum_probs=59.8
Q ss_pred ceeCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----hHHHHHHHHHHHHhCCccccccccccCccccc
Q 015732 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALK 65 (401)
Q Consensus 2 ~iLgv~~~As~~eIKkAYrkla~k~HPDkn~~----~~kFk~I~~AYevLsd~~kR~~YD~~g~~~~~ 65 (401)
+||||+++||.+|||+|||+||++||||++++ .++|++|++||+||+||.+|+.||++|..++.
T Consensus 24 ~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~ 91 (112)
T 2ctq_A 24 TLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS 91 (112)
T ss_dssp HHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence 68999999999999999999999999999984 48999999999999999999999999987654
No 23
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.77 E-value=8.2e-20 Score=142.24 Aligned_cols=61 Identities=18% Similarity=0.331 Sum_probs=56.8
Q ss_pred ceeCCCCC--CCHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhCCccccccccccCccc
Q 015732 2 RFSESRKN--ASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDA 63 (401)
Q Consensus 2 ~iLgv~~~--As~~eIKkAYrkla~k~HPDkn~~~~kFk~I~~AYevLsd~~kR~~YD~~g~~~ 63 (401)
+||||+++ ||.+|||+|||+||++||||+++++++|++|++||++|+|+.+|.. |.||..+
T Consensus 15 ~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~ 77 (79)
T 1faf_A 15 ELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYNLR-MNLGGTG 77 (79)
T ss_dssp HHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCHHHHHHHHHHHHHHHHHHHHHT-TCCSSCC
T ss_pred HHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHhhHHHHHH-HhcCCcc
Confidence 68999999 9999999999999999999999999999999999999999999988 5577654
No 24
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.76 E-value=3.9e-20 Score=153.77 Aligned_cols=60 Identities=32% Similarity=0.463 Sum_probs=58.1
Q ss_pred ceeCCCCCCCH--HHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhCCccccccccccCc
Q 015732 2 RFSESRKNASQ--DDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGE 61 (401)
Q Consensus 2 ~iLgv~~~As~--~eIKkAYrkla~k~HPDkn~~~~kFk~I~~AYevLsd~~kR~~YD~~g~ 61 (401)
+||||+++|+. +|||+|||+||++||||+++++++|++|++||+||+||.+|+.||.+|.
T Consensus 12 ~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 12 DLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTTTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred HHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCccHHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 68999999999 9999999999999999999999999999999999999999999999885
No 25
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.75 E-value=2.5e-19 Score=164.15 Aligned_cols=82 Identities=35% Similarity=0.674 Sum_probs=67.6
Q ss_pred ceeCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----hHHHHHHHHHHHHhCCccccccccccCccccccCCCCCCCCCCC
Q 015732 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGAHDP 77 (401)
Q Consensus 2 ~iLgv~~~As~~eIKkAYrkla~k~HPDkn~~----~~kFk~I~~AYevLsd~~kR~~YD~~g~~~~~~g~~~g~~~~~~ 77 (401)
+||||+++||.+|||+|||+||++||||+|++ .++|++|++||++|+||.+|+.||+||+.++.... ++....
T Consensus 6 ~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~~---~~~~~~ 82 (210)
T 3apq_A 6 SLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQ---GGQYES 82 (210)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTTC---SCCCCC
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccccccc---cccccc
Confidence 68999999999999999999999999999973 37999999999999999999999999998776432 122333
Q ss_pred ccccccccC
Q 015732 78 FDIFQSFFG 86 (401)
Q Consensus 78 ~d~F~~fFg 86 (401)
+.+|...|+
T Consensus 83 ~~~~~~~fg 91 (210)
T 3apq_A 83 WSYYRYDFG 91 (210)
T ss_dssp HHHHHHSSS
T ss_pred ccccccccc
Confidence 445555554
No 26
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.75 E-value=1.5e-19 Score=145.42 Aligned_cols=60 Identities=32% Similarity=0.513 Sum_probs=55.8
Q ss_pred ceeCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----------hHHHHHHHHHHHHhCCccccccccccCc
Q 015732 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD----------PEKFKELAQAYEVLSDPEKREIYDQYGE 61 (401)
Q Consensus 2 ~iLgv~~~As~~eIKkAYrkla~k~HPDkn~~----------~~kFk~I~~AYevLsd~~kR~~YD~~g~ 61 (401)
+||||+++||.+|||+|||+||++||||+++. .++|++|++||+||+||.+|+.||.+..
T Consensus 20 ~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 20 SILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp HHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 68999999999999999999999999999863 2799999999999999999999999754
No 27
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.75 E-value=8.6e-20 Score=161.90 Aligned_cols=60 Identities=32% Similarity=0.458 Sum_probs=55.1
Q ss_pred ceeCCCCCCC--HHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhCCccccccccccCc
Q 015732 2 RFSESRKNAS--QDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGE 61 (401)
Q Consensus 2 ~iLgv~~~As--~~eIKkAYrkla~k~HPDkn~~~~kFk~I~~AYevLsd~~kR~~YD~~g~ 61 (401)
+||||+++|| .+|||+|||+||++||||+++++++|++|++||+||+||.+|+.||+||.
T Consensus 15 ~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 15 DLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CCTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred HHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 6899999999 69999999999999999999999999999999999999999999999995
No 28
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.73 E-value=4e-19 Score=146.95 Aligned_cols=60 Identities=38% Similarity=0.620 Sum_probs=56.9
Q ss_pred ceeCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC-------hHHHHHHHHHHHHhCCccccccccccCc
Q 015732 2 RFSESRKNA-SQDDLKKAYRKAAIKNHPDKGGD-------PEKFKELAQAYEVLSDPEKREIYDQYGE 61 (401)
Q Consensus 2 ~iLgv~~~A-s~~eIKkAYrkla~k~HPDkn~~-------~~kFk~I~~AYevLsd~~kR~~YD~~g~ 61 (401)
+||||+++| |.+|||+|||+||++||||++++ .++|++|++||+||+||.+|+.||+++.
T Consensus 19 ~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 19 DVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp HHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred HHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 689999999 99999999999999999999986 3799999999999999999999999875
No 29
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=3.9e-18 Score=136.10 Aligned_cols=54 Identities=33% Similarity=0.409 Sum_probs=50.7
Q ss_pred ceeCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---hHHHHHHHHHHHHhCCcccccc
Q 015732 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD---PEKFKELAQAYEVLSDPEKREI 55 (401)
Q Consensus 2 ~iLgv~~~As~~eIKkAYrkla~k~HPDkn~~---~~kFk~I~~AYevLsd~~kR~~ 55 (401)
+||||+++||.+|||+|||+||++||||++++ .++|++|++||++|+||.+|+.
T Consensus 31 ~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 31 DMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred HHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence 58999999999999999999999999999965 4899999999999999999874
No 30
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.69 E-value=8e-18 Score=128.30 Aligned_cols=53 Identities=26% Similarity=0.425 Sum_probs=50.2
Q ss_pred ceeCCCC-CCCHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhCCccccc
Q 015732 2 RFSESRK-NASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKRE 54 (401)
Q Consensus 2 ~iLgv~~-~As~~eIKkAYrkla~k~HPDkn~~~~kFk~I~~AYevLsd~~kR~ 54 (401)
+||||++ +||.+|||+|||+||++||||+++++++|++|++||++|+|+..|+
T Consensus 18 ~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~~~~f~~i~~Aye~L~~~~~rk 71 (71)
T 2guz_A 18 QILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFLATKINEAKDFLEKRGISK 71 (71)
T ss_dssp HHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCCHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhhhhhcC
Confidence 6899999 7999999999999999999999999999999999999999987764
No 31
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.69 E-value=7.3e-18 Score=148.00 Aligned_cols=60 Identities=32% Similarity=0.497 Sum_probs=55.9
Q ss_pred ceeCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh----------HHHHHHHHHHHHhCCccccccccccCc
Q 015732 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGDP----------EKFKELAQAYEVLSDPEKREIYDQYGE 61 (401)
Q Consensus 2 ~iLgv~~~As~~eIKkAYrkla~k~HPDkn~~~----------~kFk~I~~AYevLsd~~kR~~YD~~g~ 61 (401)
+||||+++||.++||+|||+||++||||+++.. ++|++|++||+||+||.+|+.||.++.
T Consensus 14 ~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 14 SILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred HhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 689999999999999999999999999998642 799999999999999999999998764
No 32
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.68 E-value=8.9e-18 Score=133.19 Aligned_cols=55 Identities=25% Similarity=0.294 Sum_probs=50.4
Q ss_pred ceeCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----hHHHHHHHHHHHHhCCccccccc
Q 015732 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPEKREIY 56 (401)
Q Consensus 2 ~iLgv~~~As~~eIKkAYrkla~k~HPDkn~~-----~~kFk~I~~AYevLsd~~kR~~Y 56 (401)
+||||+++||.+|||+|||+||++||||+|++ .++|++|++||++|+|...|..+
T Consensus 20 ~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~~ 79 (88)
T 1iur_A 20 SVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQN 79 (88)
T ss_dssp HHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSSS
T ss_pred HHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 68999999999999999999999999999986 37999999999999998877433
No 33
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.63 E-value=3.3e-17 Score=130.48 Aligned_cols=48 Identities=27% Similarity=0.379 Sum_probs=44.4
Q ss_pred ceeCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-------hHHHHHHHHHHHHhCC
Q 015732 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD-------PEKFKELAQAYEVLSD 49 (401)
Q Consensus 2 ~iLgv~~~As~~eIKkAYrkla~k~HPDkn~~-------~~kFk~I~~AYevLsd 49 (401)
++|||+++||++|||+|||+||++||||||++ +++|++|++|||||.+
T Consensus 37 ~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 37 KPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred eecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 58999999999999999999999999999975 2589999999999974
No 34
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.61 E-value=1.4e-16 Score=141.81 Aligned_cols=59 Identities=19% Similarity=0.190 Sum_probs=54.9
Q ss_pred ceeCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCh---------HHHHHHHHHHHHhCCccccccccccC
Q 015732 2 RFSESRKNA--SQDDLKKAYRKAAIKNHPDKGGDP---------EKFKELAQAYEVLSDPEKREIYDQYG 60 (401)
Q Consensus 2 ~iLgv~~~A--s~~eIKkAYrkla~k~HPDkn~~~---------~kFk~I~~AYevLsd~~kR~~YD~~g 60 (401)
+||||+++| |.++||+|||+|+++||||++++. ++|+.|++||+||+||.+|+.||...
T Consensus 5 ~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 5 TLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp HHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 689999999 999999999999999999998752 58999999999999999999999864
No 35
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.60 E-value=1.4e-16 Score=130.60 Aligned_cols=49 Identities=20% Similarity=0.325 Sum_probs=44.6
Q ss_pred ceeCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----------hHHHHHHHHHHHHhCCcc
Q 015732 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD-----------PEKFKELAQAYEVLSDPE 51 (401)
Q Consensus 2 ~iLgv~~~As~~eIKkAYrkla~k~HPDkn~~-----------~~kFk~I~~AYevLsd~~ 51 (401)
+|||++. ||.+|||+|||+||++||||||++ +++|++|++||+||||+.
T Consensus 45 ~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 45 PVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp CCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 5899986 999999999999999999999862 379999999999999986
No 36
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.59 E-value=3.3e-16 Score=139.84 Aligned_cols=58 Identities=21% Similarity=0.278 Sum_probs=54.0
Q ss_pred ceeCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCh---------HHHHHHHHHHHHhCCcccccccccc
Q 015732 2 RFSESRKNAS--QDDLKKAYRKAAIKNHPDKGGDP---------EKFKELAQAYEVLSDPEKREIYDQY 59 (401)
Q Consensus 2 ~iLgv~~~As--~~eIKkAYrkla~k~HPDkn~~~---------~kFk~I~~AYevLsd~~kR~~YD~~ 59 (401)
+||||+++|| .++||+|||+|+++||||++++. ++|+.|++||+||+||.+|+.||..
T Consensus 8 ~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 76 (174)
T 3hho_A 8 ELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLS 76 (174)
T ss_dssp HHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred HHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 6899999998 99999999999999999998741 6899999999999999999999974
No 37
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.58 E-value=4.4e-16 Score=142.59 Aligned_cols=57 Identities=19% Similarity=0.304 Sum_probs=52.5
Q ss_pred ceeCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCh---------HHHHHHHHHHHHhCCccccccccc
Q 015732 2 RFSESRKN--ASQDDLKKAYRKAAIKNHPDKGGDP---------EKFKELAQAYEVLSDPEKREIYDQ 58 (401)
Q Consensus 2 ~iLgv~~~--As~~eIKkAYrkla~k~HPDkn~~~---------~kFk~I~~AYevLsd~~kR~~YD~ 58 (401)
+||||+++ ||.++||+|||+|+++||||++++. ++|++|++||+||+||.+|+.||.
T Consensus 47 ~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 47 SLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp HHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred HHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 68999987 7999999999999999999998741 579999999999999999999995
No 38
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.57 E-value=1.9e-16 Score=171.63 Aligned_cols=82 Identities=35% Similarity=0.674 Sum_probs=42.2
Q ss_pred ceeCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----hHHHHHHHHHHHHhCCccccccccccCccccccCCCCCCCCCCC
Q 015732 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGAHDP 77 (401)
Q Consensus 2 ~iLgv~~~As~~eIKkAYrkla~k~HPDkn~~----~~kFk~I~~AYevLsd~~kR~~YD~~g~~~~~~g~~~g~~~~~~ 77 (401)
+||||+++||.+|||+|||+||++||||+|++ .++|++|++||++|+||.+|+.||+||+.++..+.+ +....
T Consensus 25 ~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~~~---~~~~~ 101 (780)
T 3apo_A 25 SLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQG---GQYES 101 (780)
T ss_dssp HHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC------------------
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccCCC---CCccc
Confidence 68999999999999999999999999999963 379999999999999999999999999988775321 12233
Q ss_pred ccccccccC
Q 015732 78 FDIFQSFFG 86 (401)
Q Consensus 78 ~d~F~~fFg 86 (401)
+++|...|+
T Consensus 102 ~~~~~~~fg 110 (780)
T 3apo_A 102 WSYYRYDFG 110 (780)
T ss_dssp --CCSSSSS
T ss_pred ccccchhhc
Confidence 445555554
No 39
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.55 E-value=8.3e-16 Score=137.92 Aligned_cols=58 Identities=31% Similarity=0.460 Sum_probs=53.0
Q ss_pred cee------CCCC-CCCHHHHHHHHHHHHHHhCCCCCC-ChHHHHHHHHHHHHhCCcccccccccc
Q 015732 2 RFS------ESRK-NASQDDLKKAYRKAAIKNHPDKGG-DPEKFKELAQAYEVLSDPEKREIYDQY 59 (401)
Q Consensus 2 ~iL------gv~~-~As~~eIKkAYrkla~k~HPDkn~-~~~kFk~I~~AYevLsd~~kR~~YD~~ 59 (401)
+|| |+++ +||.++||+|||+||++||||+++ ..++|++|++||+||+||.+|+.||..
T Consensus 15 ~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~a~~~f~~i~~AY~vL~dp~~R~~Yd~~ 80 (181)
T 3uo3_A 15 ELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAYHTLKDPLRRSQYMLK 80 (181)
T ss_dssp GGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCSCSSGGGSHHHHHHHHHSHHHHHHHHHH
T ss_pred HHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCccHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 678 4554 999999999999999999999998 468999999999999999999999984
No 40
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=99.50 E-value=3.1e-14 Score=110.46 Aligned_cols=77 Identities=30% Similarity=0.758 Sum_probs=65.7
Q ss_pred CceeeeeeeeeeecCcccCCCCccCCe-eeccCCcccceEEEEEecCCcceeEeEeeCCCCCCcceEEcCCCCCCCcCCc
Q 015732 119 GTSKKLSLSRNVICTKCKGKGSKSGAS-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGE 197 (401)
Q Consensus 119 G~~~~~~~~r~~~C~~C~G~G~~~~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~ 197 (401)
|++++|.+++.+.|+.|+|+|...... .+|+.|+|+|.++..+ |++ +++.+|+.|+|+|.++. ++|+.|+|.
T Consensus 1 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~-~~~~~C~~C~G~G~~~~--~~C~~C~G~ 73 (79)
T 1exk_A 1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ----GFF-AVQQTCPHCQGRGTLIK--DPCNKCHGH 73 (79)
T ss_dssp CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEE----TTE-EEEEECTTTTTSSEECS--SBCGGGTTS
T ss_pred CcEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEc----CCC-EEeeECcCCCCccEECC--CcCCCCCCe
Confidence 678899999999999999999876654 6999999999876533 444 47789999999999875 899999999
Q ss_pred cEEEE
Q 015732 198 KVIQE 202 (401)
Q Consensus 198 g~~~~ 202 (401)
|++.+
T Consensus 74 G~~~~ 78 (79)
T 1exk_A 74 GRVER 78 (79)
T ss_dssp SEEEC
T ss_pred EEEee
Confidence 99864
No 41
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=99.06 E-value=1.3e-10 Score=109.38 Aligned_cols=52 Identities=15% Similarity=0.228 Sum_probs=38.0
Q ss_pred EEEEEEcCC--CcCCCEEeccCCcCCCCCC-CcccEEEEEEEeeCCc--ceecCcce
Q 015732 205 VLEVIVEKG--MQNGQKITFPGEADEAPDT-VTGDIVFVLQQKEHPK--FKRKGDDL 256 (401)
Q Consensus 205 ~l~V~Ip~G--~~~G~~i~~~g~G~~~~g~-~~GDliv~i~~~~h~~--f~R~g~dL 256 (401)
.++|.||+| +++|++++|+|+|.+.... ..|||||+|+|.-+.. ++.+...|
T Consensus 190 ~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~~~Ls~~q~~~ 246 (248)
T 1nlt_A 190 WLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPENHFTSEENLKK 246 (248)
T ss_dssp EEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC-----------
T ss_pred EEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEEEECCCCCCCCHHHHHh
Confidence 689999999 9999999999999985432 6799999999997766 66655544
No 42
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.99 E-value=2.8e-10 Score=84.49 Aligned_cols=48 Identities=17% Similarity=0.151 Sum_probs=45.5
Q ss_pred ceeCCCCC---CCHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhCC
Q 015732 2 RFSESRKN---ASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSD 49 (401)
Q Consensus 2 ~iLgv~~~---As~~eIKkAYrkla~k~HPDkn~~~~kFk~I~~AYevLsd 49 (401)
.||||+++ ||.++|++|||+|...+|||+.+++..+..|++|+++|..
T Consensus 8 ~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 8 KILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYLQSKVYRAAERLKW 58 (65)
T ss_dssp HHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Confidence 58999999 9999999999999999999999999999999999999953
No 43
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=98.85 E-value=1.6e-09 Score=89.01 Aligned_cols=52 Identities=25% Similarity=0.354 Sum_probs=44.4
Q ss_pred EEEEEcCCCcCCCEEeccCCcCCCCCCCcccEEEEEEEeeCCcceecCcceee
Q 015732 206 LEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFV 258 (401)
Q Consensus 206 l~V~Ip~G~~~G~~i~~~g~G~~~~g~~~GDliv~i~~~~h~~f~R~g~dL~~ 258 (401)
++|.||+|+++|++++++|+|.+..+ ..|||||+|+|.-+..++.+..+|+-
T Consensus 40 ~~v~ip~g~~~G~~~rl~G~G~p~~~-~~GDL~v~~~V~~P~~Ls~~q~~~l~ 91 (109)
T 3i38_A 40 ILLTVPPGSQAGQRLRIKGKGLVSKT-HTGDLFAVIKIVMPTKPDEKARELWQ 91 (109)
T ss_dssp EEEEECTTCCTTCEEEETTCSCBCSS-CBCCEEEEEEECCCSSCCHHHHHHHH
T ss_pred EEEeeCCCcCcCeEEEECCccCCCCC-CCcCEEEEEEEECCCCCCHHHHHHHH
Confidence 68999999999999999999998754 78999999999988877766655543
No 44
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=98.72 E-value=6.8e-09 Score=86.88 Aligned_cols=54 Identities=15% Similarity=0.180 Sum_probs=42.0
Q ss_pred EEEEEEcCC--CcCCCEEeccCCcCCCCCC-CcccEEEEEEEeeCCc--ceecCcceee
Q 015732 205 VLEVIVEKG--MQNGQKITFPGEADEAPDT-VTGDIVFVLQQKEHPK--FKRKGDDLFV 258 (401)
Q Consensus 205 ~l~V~Ip~G--~~~G~~i~~~g~G~~~~g~-~~GDliv~i~~~~h~~--f~R~g~dL~~ 258 (401)
.+.|+||+| +++|++++++|+|.+..+. ..|||||+++|.-+.. ++.+..+|+.
T Consensus 35 ~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~~~~ls~~q~~~l~ 93 (121)
T 1xao_A 35 WLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPENHFTSEENLKKLE 93 (121)
T ss_dssp EEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCCTTCSCHHHHHHHH
T ss_pred EEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHH
Confidence 478999999 9999999999999985433 6899999999998776 7666655543
No 45
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=98.57 E-value=1.8e-08 Score=89.74 Aligned_cols=32 Identities=31% Similarity=0.459 Sum_probs=30.4
Q ss_pred ceeCCCCCCCHHHHHHHHHHHHHHhCCCCCCC
Q 015732 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD 33 (401)
Q Consensus 2 ~iLgv~~~As~~eIKkAYrkla~k~HPDkn~~ 33 (401)
+||||+++||.+|||+|||+||++||||++++
T Consensus 121 ~vLgv~~~As~~eIKkAYRklal~~HPDK~~~ 152 (182)
T 1n4c_A 121 KPVGMADLVTPEQVKKVYRKAVLVVHPDKATG 152 (182)
T ss_dssp CCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSS
T ss_pred hcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCC
Confidence 69999999999999999999999999999864
No 46
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=98.55 E-value=1.3e-07 Score=83.84 Aligned_cols=73 Identities=18% Similarity=0.133 Sum_probs=60.6
Q ss_pred ceeeeccCCHHHHhCCcEEEEEec----CC----cEEEEEeCCCccccCCcEEEecCCCCcCCCCCCCCCCEEEEEEEeC
Q 015732 255 DLFVEHTLSLTEALCGFQFVITHL----DG----RQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDF 326 (401)
Q Consensus 255 dL~~~~~I~l~eAl~G~~~~i~~l----dG----~~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v~~~V~~ 326 (401)
|+.+++.|||.||+.|.++.|..- +| +.+.|+||+| +..|+.++++|+|-+.. ..+..|||||.++|.-
T Consensus 2 d~~~~l~islee~~~G~~k~i~~~~~~~~G~~~~~~l~V~Ip~G--~~~G~~ir~~g~G~~~~-~gg~~GDl~v~i~v~~ 78 (170)
T 1c3g_A 2 TVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPG--WKAGTKITYKNQGDYNP-QTGRRKTLQFVIQEKS 78 (170)
T ss_dssp EEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTT--CCTTCEEEESSCSSBCS-SSSCBCEEEEEEEECC
T ss_pred CEEEEEEeEHHHhhCCcEEEEEEEEecCCCcEEeEEEEEEeCCC--ccCCCEEEEeccccCCC-CCCccccEEEEEEEcc
Confidence 789999999999999998877643 23 7899999999 89999999999998654 3456899999999975
Q ss_pred CCCC
Q 015732 327 PESL 330 (401)
Q Consensus 327 P~~l 330 (401)
...+
T Consensus 79 h~~F 82 (170)
T 1c3g_A 79 HPNF 82 (170)
T ss_dssp CSSE
T ss_pred CCcc
Confidence 4443
No 47
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=98.55 E-value=1.4e-07 Score=84.25 Aligned_cols=76 Identities=16% Similarity=0.098 Sum_probs=61.6
Q ss_pred CcceeeeccCCHHHHhCCcEEEEEec-----------CCcEEEEEeCCCccccCCcEEEecCCCCcCCCCCCCCCCEEEE
Q 015732 253 GDDLFVEHTLSLTEALCGFQFVITHL-----------DGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIH 321 (401)
Q Consensus 253 g~dL~~~~~I~l~eAl~G~~~~i~~l-----------dG~~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v~ 321 (401)
+.|+.+++.|||.||+.|.++.|..- ..+.|.|+||+| ++.|+.++++|+|-+.. ..+..|||||.
T Consensus 3 g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g~~~~~~~l~V~Ip~G--~~~G~~ir~~g~G~~g~-~gg~~GDl~v~ 79 (180)
T 2q2g_A 3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPG--WKDGTKLTYSGEGDQES-PGTSPGDLVLI 79 (180)
T ss_dssp -CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTEEEEEEEEEEEEECTT--CCTTCEEEETTCSCCSS-TTSCCCEEEEE
T ss_pred CCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCceEEeeEEEEEEECCC--CcCCcEEEEeeccCCCC-CCCccccEEEE
Confidence 67999999999999999998777532 246799999999 89999999999998732 23468999999
Q ss_pred EEEeCCCCCC
Q 015732 322 FTVDFPESLS 331 (401)
Q Consensus 322 ~~V~~P~~l~ 331 (401)
++|.-...+.
T Consensus 80 i~~~~h~~F~ 89 (180)
T 2q2g_A 80 IQTKTHPRFT 89 (180)
T ss_dssp EEECCCSSCE
T ss_pred EEEEecccEE
Confidence 9997444443
No 48
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=98.48 E-value=1.6e-07 Score=91.56 Aligned_cols=76 Identities=22% Similarity=0.210 Sum_probs=59.0
Q ss_pred ecCcceeeeccCCHHHHhCCcEEEEEec------C-------CcEEEEEeCCCccccCCcEEEecCCCCcCCCCCCCCCC
Q 015732 251 RKGDDLFVEHTLSLTEALCGFQFVITHL------D-------GRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGK 317 (401)
Q Consensus 251 R~g~dL~~~~~I~l~eAl~G~~~~i~~l------d-------G~~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~~~~~~Gd 317 (401)
++|.||++++.|+|.||+.|.+..|..- . .+.|.|+|||| +++|++++++|+|.|.. +.+..||
T Consensus 138 ~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~G--v~~G~~Irl~G~G~~g~-~gg~~GD 214 (329)
T 3lz8_A 138 ARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAG--VVDGQRIRLKGQGTPGE-NGGPNGD 214 (329)
T ss_dssp CCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTT--CCTTCEEEESSCSCCC----CCCCC
T ss_pred CCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCC--CCCCCEEEEcccccCCC-CCCCCCc
Confidence 5688899999999999999877665432 2 34688999999 89999999999999865 2346899
Q ss_pred EEEEEEEeCCCC
Q 015732 318 LYIHFTVDFPES 329 (401)
Q Consensus 318 L~v~~~V~~P~~ 329 (401)
|||.|+|.-...
T Consensus 215 L~v~I~v~~h~~ 226 (329)
T 3lz8_A 215 LWLVIHIAPHPL 226 (329)
T ss_dssp EEEEECCCCCSS
T ss_pred EEEEEEEecCCc
Confidence 999998864443
No 49
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=98.43 E-value=5.1e-07 Score=80.70 Aligned_cols=75 Identities=16% Similarity=0.139 Sum_probs=58.9
Q ss_pred CcceeeeccCCHHHHhCCcEEEEEec------CC-------cEEEEEeCCCccccCCcEEEecCCCCcCCCCCCCCCCEE
Q 015732 253 GDDLFVEHTLSLTEALCGFQFVITHL------DG-------RQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLY 319 (401)
Q Consensus 253 g~dL~~~~~I~l~eAl~G~~~~i~~l------dG-------~~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~ 319 (401)
+.|+.+++.|||.||..|.++.|.-- .| +.|.|+||+| +..|+.++++|+|-+..+ +..||||
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g~~~~~~~l~V~Ip~G--~~~G~~ir~~G~G~~~~~--g~~GDl~ 77 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKG--WKEGTKITFPKEGDQTSN--NIPADIV 77 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSCEEEEEEEEEEEECTT--CCTTCEEEETTCSCCCSS--SCCCCEE
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCceEEEEeEEEEEEECCC--ccCCcEEEEeeccccCCC--CCcccEE
Confidence 46899999999999999998776532 34 5789999999 899999999999998652 4689999
Q ss_pred EEEEEeCCCCCC
Q 015732 320 IHFTVDFPESLS 331 (401)
Q Consensus 320 v~~~V~~P~~l~ 331 (401)
|.++|.-...+.
T Consensus 78 v~i~~~~h~~F~ 89 (181)
T 3agx_A 78 FVLKDKPHNIFK 89 (181)
T ss_dssp EEEEECCCSSCE
T ss_pred EEEEEeccccce
Confidence 999997544444
No 50
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=97.86 E-value=2.7e-06 Score=60.23 Aligned_cols=33 Identities=30% Similarity=0.859 Sum_probs=28.6
Q ss_pred eEeEeeCCCCCCcceEEcCCCCCCCcCCccEEEEe
Q 015732 169 QQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEK 203 (401)
Q Consensus 169 ~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~ 203 (401)
++++++|+.|+|+|+++. ++|+.|+|.|++.+.
T Consensus 6 qq~~~~C~~C~GsG~~i~--~~C~~C~G~G~v~~~ 38 (53)
T 3lcz_A 6 DDLETTCPNCNGSGREEP--EPCPKCLGKGVILTA 38 (53)
T ss_dssp HHHEEECTTTTTSCEETT--EECTTTTTSSEEECH
T ss_pred CceeccCcCCcccccCCC--CcCCCCCCcEEEEEE
Confidence 457889999999999986 899999999988654
No 51
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=97.61 E-value=1.5e-05 Score=61.10 Aligned_cols=46 Identities=33% Similarity=0.849 Sum_probs=35.7
Q ss_pred eeeeecCcccCCCCccCC------eeeccCCcccceEEEEEecCCcceeEeEeeCCCCCCcceEE
Q 015732 127 SRNVICTKCKGKGSKSGA------SMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETI 185 (401)
Q Consensus 127 ~r~~~C~~C~G~G~~~~~------~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~ 185 (401)
.....|+.|+|+|..... ..+|+.|+|+|.+ +..+|+.|+|.|.+.
T Consensus 26 ~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~-------------~~~~C~~C~G~G~~~ 77 (79)
T 1exk_A 26 TQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTL-------------IKDPCNKCHGHGRVE 77 (79)
T ss_dssp SCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEE-------------CSSBCGGGTTSSEEE
T ss_pred ccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEE-------------CCCcCCCCCCeEEEe
Confidence 345689999999975321 2589999999964 246899999999874
No 52
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}
Probab=97.56 E-value=1.2e-06 Score=92.21 Aligned_cols=78 Identities=17% Similarity=0.230 Sum_probs=57.2
Q ss_pred EEeEeeeeeeeecCceeeeeeeeeeecCcccCCCCccCC----eeeccCCcccceEEE--------EEecCCcceeEeEe
Q 015732 106 IHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGA----SMKCSGCQGSGMKVS--------IRHLGPSMIQQMQH 173 (401)
Q Consensus 106 ~~~l~vslee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~----~~~C~~C~G~G~~~~--------~~~~gpg~~~~~~~ 173 (401)
.+.+.++|+|++.|.++++.+.+...|..|+|+|++.+. ..+|+.|+|+..... .+.+-.|++-+...
T Consensus 168 ~~~l~i~feeA~~G~~k~i~v~~~~~C~tCHGsGA~~Gt~~~~~~tC~tCHGs~~~~~~~~~~~~~iH~iH~G~fP~~~~ 247 (669)
T 3pmq_A 168 ITNQHYDWQSSGNMLAYTRNLVSIDTCNSCHSNLAFHGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSKHLTGFPQSIS 247 (669)
T ss_dssp SCCCEEEEECSSSSCCCCCCCCCSHHHHHHHSSCCTTTTTSCSSSCSTTTSSTTTCCCSSCSHHHHHHHHTTSSCSSCTT
T ss_pred eEEEEEEhHHhhCCCceEEEeccCCcCCCCCCCCCcCCccCcCCccCCCCCCCcccCCccccccceeeeeeccCCCCccC
Confidence 467899999999999999999999999999999998875 478999999941100 00000012223346
Q ss_pred eCCCCCCcce
Q 015732 174 PCNECKGTGE 183 (401)
Q Consensus 174 ~C~~C~G~G~ 183 (401)
.|..|+..+.
T Consensus 248 ~C~~CH~~~~ 257 (669)
T 3pmq_A 248 NCQTCHADNP 257 (669)
T ss_dssp CCTTTSCCCT
T ss_pred cchhhcCCcc
Confidence 7999998764
No 53
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.47 E-value=4.4e-05 Score=61.75 Aligned_cols=46 Identities=30% Similarity=0.796 Sum_probs=35.6
Q ss_pred eeeecCcccCCCCcc---C---CeeeccCCcccceEEEEEecCCcceeEeEeeCCCCCCcceEEc
Q 015732 128 RNVICTKCKGKGSKS---G---ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETIN 186 (401)
Q Consensus 128 r~~~C~~C~G~G~~~---~---~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~ 186 (401)
....|+.|+|+|... + ...+|+.|+|+|.+ +..+|+.|+|.|.+..
T Consensus 44 ~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~-------------i~~~C~~C~G~G~v~~ 95 (104)
T 2ctt_A 44 KVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSI-------------IISPCVVCRGAGQAKQ 95 (104)
T ss_dssp CCEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEE-------------CSSCCSSSSSCSEECC
T ss_pred CCccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceE-------------CCCcCCCCCCeeEEEE
Confidence 346899999999642 1 23689999999964 3468999999998754
No 54
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=96.87 E-value=0.00045 Score=48.69 Aligned_cols=26 Identities=38% Similarity=0.940 Sum_probs=11.7
Q ss_pred eeCCCCCCcceEEcCCCCCCCcCCccEE
Q 015732 173 HPCNECKGTGETINDKDRCPQCKGEKVI 200 (401)
Q Consensus 173 ~~C~~C~G~G~~~~~~~~C~~C~G~g~~ 200 (401)
.+|+.|+|+|.++. .+|+.|+|.|.+
T Consensus 10 ~~C~~C~GsG~~~~--~~C~~C~G~G~v 35 (53)
T 2bx9_A 10 VACPKCERAGEIEG--TPCPACSGKGVI 35 (53)
T ss_dssp EECTTTTTSSEETT--EECTTTTTSSEE
T ss_pred ccCCCCcceeccCC--CCCccCCCCccE
Confidence 34444444444432 345555554443
No 55
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=96.64 E-value=0.0011 Score=46.65 Aligned_cols=26 Identities=38% Similarity=0.972 Sum_probs=15.1
Q ss_pred eecCcccCCCCccCCeeeccCCcccceE
Q 015732 130 VICTKCKGKGSKSGASMKCSGCQGSGMK 157 (401)
Q Consensus 130 ~~C~~C~G~G~~~~~~~~C~~C~G~G~~ 157 (401)
..|+.|+|+|.... .+|+.|+|+|.+
T Consensus 10 ~~C~~C~GsG~~~~--~~C~~C~G~G~v 35 (53)
T 2bx9_A 10 VACPKCERAGEIEG--TPCPACSGKGVI 35 (53)
T ss_dssp EECTTTTTSSEETT--EECTTTTTSSEE
T ss_pred ccCCCCcceeccCC--CCCccCCCCccE
Confidence 45666666665532 456666666654
No 56
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=96.53 E-value=0.0015 Score=46.03 Aligned_cols=26 Identities=31% Similarity=0.870 Sum_probs=14.6
Q ss_pred eecCcccCCCCccCCeeeccCCcccceE
Q 015732 130 VICTKCKGKGSKSGASMKCSGCQGSGMK 157 (401)
Q Consensus 130 ~~C~~C~G~G~~~~~~~~C~~C~G~G~~ 157 (401)
..|+.|+|+|.... .+|+.|+|+|.+
T Consensus 10 ~~C~~C~GsG~~i~--~~C~~C~G~G~v 35 (53)
T 3lcz_A 10 TTCPNCNGSGREEP--EPCPKCLGKGVI 35 (53)
T ss_dssp EECTTTTTSCEETT--EECTTTTTSSEE
T ss_pred ccCcCCcccccCCC--CcCCCCCCcEEE
Confidence 45666666665432 456666666643
No 57
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=95.44 E-value=0.01 Score=57.85 Aligned_cols=33 Identities=33% Similarity=0.557 Sum_probs=30.5
Q ss_pred ceeCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh
Q 015732 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGDP 34 (401)
Q Consensus 2 ~iLgv~~~As~~eIKkAYrkla~k~HPDkn~~~ 34 (401)
.+||+.+.++.++|+++|+++|+++|||+.+++
T Consensus 386 ~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~ 418 (450)
T 2y4t_A 386 KILGVKRNAKKQEIIKAYRKLALQWHPDNFQNE 418 (450)
T ss_dssp GGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSH
T ss_pred HHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCc
Confidence 578999999999999999999999999999863
No 58
>2vl6_A SSO MCM N-TER, minichromosome maintenance protein MCM; helicase, hydrolase, zinc-finger, ATP-binding, DNA-BIND ssDNA binding; 2.8A {Sulfolobus solfataricus}
Probab=63.29 E-value=24 Score=32.41 Aligned_cols=64 Identities=17% Similarity=0.196 Sum_probs=30.4
Q ss_pred EeeCCCCCCcceEEcCCCCCCCcCCccEEEEeEEEEEEE-cCCCcCCC---EEeccCCcCCCCCCCcccEEEEEE
Q 015732 172 QHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIV-EKGMQNGQ---KITFPGEADEAPDTVTGDIVFVLQ 242 (401)
Q Consensus 172 ~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~l~V~I-p~G~~~G~---~i~~~g~G~~~~g~~~GDliv~i~ 242 (401)
...|+.|+.+|........| .......++|.= |..++.|+ .|.+-=.++-.-...|||-+.+.=
T Consensus 168 P~~Cp~C~~~~~~~l~~~~s-------~f~D~Q~ikiQE~pe~vp~G~~Prsi~v~l~~dLvd~~~PGDrV~vtG 235 (268)
T 2vl6_A 168 PTICPKCGKPGQFRLIPEKT-------KLIDWQKAVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTG 235 (268)
T ss_dssp CSBCTTTCCBCEEEECGGGC-------EEEEEEEEEEECCGGGSCTTSCCCEEEEEEEGGGTTSSCTTCEEEEEE
T ss_pred CccCCCCCCCCCEEEecCcc-------EEEeeEEEEEEeCCCCCCCCCCCcEEEEEEccCccCcccCCCEEEEEE
Confidence 34577777766322111111 333445555532 22233343 233333444445567899877543
No 59
>3jt0_A Lamin-B1; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, HR5546A, LMNB1_human; 2.39A {Homo sapiens}
Probab=51.31 E-value=30 Score=28.97 Aligned_cols=52 Identities=13% Similarity=0.143 Sum_probs=35.8
Q ss_pred HhCCcEEEEEecCCcEEEEEeCCCccccCCcEEEecCCCCcCCCCCCCCCCEEEE
Q 015732 267 ALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIH 321 (401)
Q Consensus 267 Al~G~~~~i~~ldG~~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v~ 321 (401)
.|-|+++. ...||+.+..+.|++.+++||..++|-.+|.-...+ ...||+-+
T Consensus 51 ~LgGW~L~-r~v~g~~~~y~FP~~~~L~pg~~VtVwa~g~g~~~~--pp~dlv~~ 102 (144)
T 3jt0_A 51 PMGGWEMI-RKIGDTSVSYKYTSRYVLKAGQTVTIWAANAGVTAS--PPTDLIWK 102 (144)
T ss_dssp ECTTCEEE-EEETTEEEEEECCTTCEECTTCEEEEEETTSCCCCB--TTTEEEET
T ss_pred ecCCcEEE-EEeCCCceEEEcCCCcEECCCCEEEEEECCCCCCCC--CChhheec
Confidence 45566655 346777677899999999999999998776532212 24566654
No 60
>1ltl_A DNA replication initiator (CDC21/CDC54); HET: DNA; 3.00A {Methanothermobacterthermautotrophicus} SCOP: b.40.4.11
Probab=50.60 E-value=69 Score=29.47 Aligned_cols=15 Identities=0% Similarity=0.047 Sum_probs=9.1
Q ss_pred CCCHHHHHHHHHHHH
Q 015732 9 NASQDDLKKAYRKAA 23 (401)
Q Consensus 9 ~As~~eIKkAYrkla 23 (401)
.|...||++.|+..-
T Consensus 8 ~~~~~~~~~~f~~Fl 22 (279)
T 1ltl_A 8 TVDKSKTLTKFEEFF 22 (279)
T ss_dssp -CCHHHHHHHHHHHT
T ss_pred cCChHHHHHHHHHHh
Confidence 456778877755543
No 61
>2lll_A Lamin-B2; immunoglobulin-like fold, structural protein, NESG, northeas structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=46.21 E-value=35 Score=28.34 Aligned_cols=51 Identities=12% Similarity=0.152 Sum_probs=34.2
Q ss_pred HhCCcEEEEEecCCc-EEEEEeCCCccccCCcEEEecCCCCcCCCCCCCCCCEEE
Q 015732 267 ALCGFQFVITHLDGR-QLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYI 320 (401)
Q Consensus 267 Al~G~~~~i~~ldG~-~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v 320 (401)
.|-|+++.= ..||+ .+..+.|++-+++||..++|-..|.-.... ...||+.
T Consensus 47 ~L~GW~L~r-~v~g~~~~~y~Fp~~~~L~pg~~VtIws~~~g~~~~--pp~dlv~ 98 (139)
T 2lll_A 47 SLGNWRIKR-QVLEGEEIAYKFTPKYILRAGQMVTVWAAGAGVAHS--PPSTLVW 98 (139)
T ss_dssp ECSSCEEEE-EETTSCEEEEECCTTCEECTTCEEEEEEGGGTCCCB--TTTEEEE
T ss_pred ccCCCEEEE-ecCCCccEEEEECCCcEECCCCEEEEEeCCCCCCCC--CchhEEE
Confidence 455666543 44554 378899999999999999999877532212 2356664
No 62
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}
Probab=45.96 E-value=3.5 Score=43.38 Aligned_cols=47 Identities=13% Similarity=0.371 Sum_probs=30.9
Q ss_pred eeccCCcccceEEEEEecCCcceeEeEeeCCCCCCcceE-------------------EcCCCCCCCcCCccE
Q 015732 146 MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGET-------------------INDKDRCPQCKGEKV 199 (401)
Q Consensus 146 ~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~-------------------~~~~~~C~~C~G~g~ 199 (401)
.+|..|+|+|.. +|.......+|+.|+|.... ......|..|+....
T Consensus 192 ~~C~tCHGsGA~-------~Gt~~~~~~tC~tCHGs~~~~~~~~~~~~~iH~iH~G~fP~~~~~C~~CH~~~~ 257 (669)
T 3pmq_A 192 DTCNSCHSNLAF-------HGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSKHLTGFPQSISNCQTCHADNP 257 (669)
T ss_dssp HHHHHHHSSCCT-------TTTTSCSSSCSTTTSSTTTCCCSSCSHHHHHHHHTTSSCSSCTTCCTTTSCCCT
T ss_pred CcCCCCCCCCCc-------CCccCcCCccCCCCCCCcccCCccccccceeeeeeccCCCCccCcchhhcCCcc
Confidence 579999999952 33211134689999999311 112357999998764
No 63
>2qkd_A Zinc finger protein ZPR1; helical hairpins, beta helix, anti-parrallel beta sheet, double straded anti-parallel beta helix, metal binding protein; 2.00A {Mus musculus}
Probab=41.90 E-value=18 Score=35.68 Aligned_cols=36 Identities=19% Similarity=0.346 Sum_probs=22.2
Q ss_pred eeccCCcccceEEEEEecCC--cceeEeEeeCCCCCCc
Q 015732 146 MKCSGCQGSGMKVSIRHLGP--SMIQQMQHPCNECKGT 181 (401)
Q Consensus 146 ~~C~~C~G~G~~~~~~~~gp--g~~~~~~~~C~~C~G~ 181 (401)
..|+.|+..|........=| +=+-.+...|+.|+=+
T Consensus 13 s~Cp~C~~~g~t~~~~~~IP~F~eVii~Sf~C~~CGyr 50 (404)
T 2qkd_A 13 SLCMNCYRNGTTRLLLTKIPFFREIIVSSFSCEHCGWN 50 (404)
T ss_dssp EECTTTSSEEEEEEEEEEETTTEEEEEEEEECTTTCCE
T ss_pred ccCCCCCCCceEEEEEEcCCCCceEEEEEEECCCCCCc
Confidence 46888887776543322223 3344567889999765
No 64
>3hn9_A Lamin-B1; structural genomics, structural genomics consortium, SGC, acetylation, chromosomal rearrangement, coiled coil, intermediate filament; 2.00A {Homo sapiens} PDB: 3umn_A 2kpw_A
Probab=37.52 E-value=69 Score=25.85 Aligned_cols=40 Identities=15% Similarity=0.188 Sum_probs=30.0
Q ss_pred HhCCcEEEEEecCCcEEEEEeCCCccccCCcEEEecCCCCc
Q 015732 267 ALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMP 307 (401)
Q Consensus 267 Al~G~~~~i~~ldG~~l~i~ip~g~vi~~g~~~~i~g~Gmp 307 (401)
.|-|+++.- ..||.....+.|++-+++||..++|-.+|.-
T Consensus 38 ~L~gW~l~r-~v~~~~~~y~Fp~~~~L~pg~~vtVwa~g~g 77 (123)
T 3hn9_A 38 PMGGWEMIR-KIGDTSVSYKYTSRYVLKAGQTVTIWAANAG 77 (123)
T ss_dssp ECTTCEEEE-EETTEEEEEECCTTCEECTTCEEEEEETTSS
T ss_pred ecCCcEEEE-EeCCCceEEEcCCCcEECCCCEEEEEECCCC
Confidence 456666653 3567655689999999999999999877653
No 65
>2bx2_L Ribonuclease E, RNAse E; RNA-binding, RNA turnover, RNA processing, hydrolase, endonu nuclease; 2.85A {Escherichia coli} PDB: 2c0b_L 2c4r_L 2vmk_A 2vrt_A 1slj_A 1smx_A 1sn8_A
Probab=35.77 E-value=7.7 Score=39.54 Aligned_cols=31 Identities=32% Similarity=0.629 Sum_probs=19.1
Q ss_pred ceEEEE-EecCCcceeEeEeeCCCCCCcceEE
Q 015732 155 GMKVSI-RHLGPSMIQQMQHPCNECKGTGETI 185 (401)
Q Consensus 155 G~~~~~-~~~gpg~~~~~~~~C~~C~G~G~~~ 185 (401)
|.+.++ ++.++.+...+..+||.|+|+|.+.
T Consensus 390 GLvEmTRkR~r~sL~e~~~~~Cp~C~G~G~v~ 421 (517)
T 2bx2_L 390 GLLEMSRQRLSPSLGESSHHVCPRCSGTGTVR 421 (517)
T ss_dssp SEEEEEECCCSCCHHHHHCCCCSSSSSSSCCC
T ss_pred ceEEEeecCcCcChhhhhcCcCCCcCCceeEC
Confidence 444333 3455656555667788888888654
No 66
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=32.57 E-value=7.1 Score=39.91 Aligned_cols=66 Identities=21% Similarity=0.471 Sum_probs=37.2
Q ss_pred ecCcccCCCCccCC-----eeeccCCcccceEEEE--EecCCcceeEeEeeCCCCCCcceEEcCCCCCCCcCCcc
Q 015732 131 ICTKCKGKGSKSGA-----SMKCSGCQGSGMKVSI--RHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEK 198 (401)
Q Consensus 131 ~C~~C~G~G~~~~~-----~~~C~~C~G~G~~~~~--~~~gpg~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g 198 (401)
.|..||+.+..... ...|-.|++.-..+.. ....|.....-...|..|+-.-.. ....|..||...
T Consensus 14 ~C~~CH~~~~~~~~~~~~~~~~C~~CH~~~~~~~~~~~~~~~h~~~~~~~~C~~CH~~h~~--~~~~c~~ch~~~ 86 (566)
T 1qo8_A 14 SCQSCHAKPIKVTDSETHENAQCKSCHGEYAELANDKLQFDPHNSHLGDINCTSCHKGHEE--PKFYCNECHSFD 86 (566)
T ss_dssp CGGGTSCSSCCCCTTCHHHHHHHHHHHCCHHHHCCSSSSSCTTSSTTCSCCGGGTSCSSSC--CCCGGGGTCCCC
T ss_pred ChhhhCCCccccccccCccCCHHhhhCcCHHHHhhccccCCcchhcCCCCCchhhCcCCcC--cCchhhhhcCCC
Confidence 69999998754311 1469999975321100 000010000114689999976542 347899998764
No 67
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=32.06 E-value=34 Score=24.95 Aligned_cols=52 Identities=17% Similarity=0.369 Sum_probs=31.2
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCChHH-HHHHH--HHHHHhCCc-ccccccccc
Q 015732 8 KNASQDDLKKAYRKAAIKNHPDKGGDPEK-FKELA--QAYEVLSDP-EKREIYDQY 59 (401)
Q Consensus 8 ~~As~~eIKkAYrkla~k~HPDkn~~~~k-Fk~I~--~AYevLsd~-~kR~~YD~~ 59 (401)
.-+|.+|.+.||++|-..++-+-.-.=++ .+.|. .-|.+|.++ ++++.|+.|
T Consensus 10 ~~~t~eea~~~F~~LL~e~~V~~~~tWe~~~~~i~~DpRY~al~~~~eRk~~F~ey 65 (71)
T 1uzc_A 10 TWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAY 65 (71)
T ss_dssp CCCSHHHHHHHHHHHHHHTTCCTTCCHHHHHHHHHTSGGGGGCSSHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHcCcCCCCCHHHHHHHHccCccccccCCHHHHHHHHHHH
Confidence 45799999999999999885333222122 22222 346666653 455566665
No 68
>1ufg_A Lamin A, nuclear lamin; immunoglobulin like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: b.1.16.1
Probab=31.38 E-value=97 Score=26.01 Aligned_cols=51 Identities=14% Similarity=0.074 Sum_probs=34.4
Q ss_pred HhCCcEEEEEecCCc-EEEEEeCCCccccCCcEEEecCCCCcCCCCCCCCCCEEE
Q 015732 267 ALCGFQFVITHLDGR-QLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYI 320 (401)
Q Consensus 267 Al~G~~~~i~~ldG~-~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v 320 (401)
.|-|+++.=. .||. .+..+.|++-+++||..++|-..|.-.... ...||+.
T Consensus 63 ~L~GW~L~r~-vdg~~~~~y~Fp~~~~L~pg~tVtIws~~~g~~~~--pp~dlv~ 114 (151)
T 1ufg_A 63 SMGNWQIRRQ-NGDDPLMTYRFPPKFTLKAGQVVTIWASGAGATHS--PPTDLVW 114 (151)
T ss_dssp ECSSCEEEEE-ETTSCCEEEECCTTCEECTTCEEEEEESSSSCCCC--TTTEEEE
T ss_pred ccCCCEEEEe-cCCCccEEEEECCCcEECCCCEEEEEeCCCCCCCC--CchhEEE
Confidence 4566665433 4654 377899999999999999999877532212 2356665
No 69
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=30.13 E-value=34 Score=24.11 Aligned_cols=47 Identities=23% Similarity=0.417 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCC-hHHHHHH---HHHHHHhCC-cc-cccccccc
Q 015732 13 DDLKKAYRKAAIKNHPDKGGD-PEKFKEL---AQAYEVLSD-PE-KREIYDQY 59 (401)
Q Consensus 13 ~eIKkAYrkla~k~HPDkn~~-~~kFk~I---~~AYevLsd-~~-kR~~YD~~ 59 (401)
+|..+||.+|-+...=|-+=+ +...+.| .--|-+|.| |. +++.|+.|
T Consensus 3 eEae~aF~~lL~~~~V~s~wsweqamr~i~i~DPrY~al~d~~~eRK~~Fe~Y 55 (59)
T 2b7e_A 3 MEAEKEFITMLKENQVDSTWSFSRIISELGTRDPRYWMVDDDPLWKKEMFEKY 55 (59)
T ss_dssp THHHHHHHHHHHHTTCCSSCCHHHHHHHHHHHCTHHHHSCCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCCcHHHHHHHhccCCCccccccCCHHHHHHHHHHH
Confidence 577899999988764333222 3566777 368999997 65 66778876
No 70
>1ifr_A Lamin A/C; immunoglobulin, immune system; 1.40A {Homo sapiens} SCOP: b.1.16.1 PDB: 1ivt_A 3gef_A
Probab=29.57 E-value=90 Score=25.10 Aligned_cols=51 Identities=16% Similarity=0.082 Sum_probs=34.5
Q ss_pred HhCCcEEEEEecCCc-EEEEEeCCCccccCCcEEEecCCCCcCCCCCCCCCCEEE
Q 015732 267 ALCGFQFVITHLDGR-QLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYI 320 (401)
Q Consensus 267 Al~G~~~~i~~ldG~-~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v 320 (401)
.|-|+++.=. .+|+ ....+.|++-+++||..++|-..|.-.... ...||+-
T Consensus 32 ~L~gW~l~r~-v~~~~~~~y~Fp~~~~L~pg~~vtIws~~~g~~~~--pp~dlv~ 83 (121)
T 1ifr_A 32 SMGNWQIKRQ-NGDDPLLTYRFPPKFTLKAGQVVTIWAAGAGATHS--PPTDLVW 83 (121)
T ss_dssp ECTTCEEEEE-ETTSCCEEEECCSSCEECTTCEEEEEETTSSCCCB--TTTEEEE
T ss_pred ccCCCEEEEE-cCCCccEEEEeCCCcEECCCCEEEEEeCCCCCCCC--CchhEEE
Confidence 4566665443 4554 378899999999999999999887532222 2356665
No 71
>2rq5_A Protein jumonji; developmental protein, nucleus, repressor, transcription, transcription regulation; NMR {Mus musculus}
Probab=28.97 E-value=18 Score=29.30 Aligned_cols=22 Identities=23% Similarity=0.431 Sum_probs=15.1
Q ss_pred HHHHHHHHHHhCCccccccccc
Q 015732 37 FKELAQAYEVLSDPEKREIYDQ 58 (401)
Q Consensus 37 Fk~I~~AYevLsd~~kR~~YD~ 58 (401)
+..+=.+||.+++.++++.+|.
T Consensus 90 Y~k~L~~YE~~~~~e~~~l~~~ 111 (121)
T 2rq5_A 90 YCQYLLSYDSLSPEEHRRLEKE 111 (121)
T ss_dssp HHTTHHHHHHCCHHHHHHHHHH
T ss_pred HHHHhHHHHCcCHHHHhhHHHH
Confidence 3334567788888888777664
No 72
>3nyb_B Protein AIR2; polya RNA polymerase, zinc knuckle protein, RNA surveillance binds to TRF4P/AIR2P heterodimer; 2.70A {Saccharomyces cerevisiae}
Probab=28.38 E-value=26 Score=26.37 Aligned_cols=54 Identities=24% Similarity=0.366 Sum_probs=27.7
Q ss_pred eeeecCcccCCCCccCCe---eeccCCcccceEEEEEecCCcceeEeEeeCCCCCCcceEEc
Q 015732 128 RNVICTKCKGKGSKSGAS---MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETIN 186 (401)
Q Consensus 128 r~~~C~~C~G~G~~~~~~---~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~ 186 (401)
+.+.|..|...|=.+..- ..|-.|...|.+...... | .....|-.|+..|.+-.
T Consensus 4 k~~~C~~Cg~~GH~~~~Cp~~~rcY~c~~~gh~~~~c~~-p----~~~~~CYnCG~~GH~~r 60 (83)
T 3nyb_B 4 KKVQCTLCKSKKHSKERCPSIWRAYILVDDNEKAKPKVL-P----FHTIYCYNCGGKGHFGD 60 (83)
T ss_dssp ---CCSSSCCSSSCGGGCGGGTCCCCBC------------------CCCBCSSSSCBSSCGG
T ss_pred ccCCCCCCCCCCCccccCCCcccccccccCCcccccccC-C----CCCCeecccCCCCcCcc
Confidence 456799999888554321 368889888865332211 1 12467999999997653
No 73
>3vdz_A Ubiquitin-40S ribosomal protein S27A; gadolinium, MRI contrast agent, peptide-based contrast agent lanthanide binding TAG; 2.40A {Synthetic construct} PDB: 2ojr_A
Probab=28.36 E-value=57 Score=25.48 Aligned_cols=40 Identities=20% Similarity=0.548 Sum_probs=26.5
Q ss_pred cCcceeeeccCC---HHHHhCCcEEEEEecCCcEEEEEeCCCc
Q 015732 252 KGDDLFVEHTLS---LTEALCGFQFVITHLDGRQLLIKSQPGE 291 (401)
Q Consensus 252 ~g~dL~~~~~I~---l~eAl~G~~~~i~~ldG~~l~i~ip~g~ 291 (401)
++.++++....+ ..+.....++.|++++|+.+.|.+++..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~m~I~Vk~~~G~~~~l~v~~~~ 56 (111)
T 3vdz_A 14 DGDELYIDTDNDGSIDGDELLAMQIFVKTLTGKTITLEVEPSD 56 (111)
T ss_dssp CGGGEEECTTCSSCCCTGGGGCEEEEEECSSSCEEEEEECTTC
T ss_pred CCceeccccccccccCcCCCccEEEEEEeCCCCEEEEEeCCCC
Confidence 466777776655 3444455677788888877777776653
No 74
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=28.15 E-value=94 Score=23.28 Aligned_cols=54 Identities=19% Similarity=0.545 Sum_probs=28.0
Q ss_pred eecCcccCCCCccCCeeeccCCcccceEEEEEecCCcceeEeEeeCCCCCCcceEEc----CCCCCCCcCCc
Q 015732 130 VICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETIN----DKDRCPQCKGE 197 (401)
Q Consensus 130 ~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~----~~~~C~~C~G~ 197 (401)
..|+.|+..=...+....|..|+.. + ....-||.|+-.=.+.+ ..-.|..|++-
T Consensus 3 ~~CP~C~~~l~~~~~~~~C~~C~~~-------------~-~~~afCPeCgq~Le~lkACGA~~yFC~~C~~L 60 (81)
T 2jrp_A 3 ITCPVCHHALERNGDTAHCETCAKD-------------F-SLQALCPDCRQPLQVLKACGAVDYFCQNGHGL 60 (81)
T ss_dssp CCCSSSCSCCEECSSEEECTTTCCE-------------E-EEEEECSSSCSCCCEEEETTEEEECCTTTTCC
T ss_pred CCCCCCCCccccCCCceECcccccc-------------C-CCcccCcchhhHHHHHHhcCCcCeeeccCCCE
Confidence 4688887553323334557777752 0 12236777765422111 12467777665
No 75
>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}
Probab=26.45 E-value=2e+02 Score=25.93 Aligned_cols=27 Identities=22% Similarity=0.442 Sum_probs=19.1
Q ss_pred cEEEEEecCCcEEEEE--eCCCccccCCcEE
Q 015732 271 FQFVITHLDGRQLLIK--SQPGEVVKPDQFK 299 (401)
Q Consensus 271 ~~~~i~~ldG~~l~i~--ip~g~vi~~g~~~ 299 (401)
+++.|++.||++|... +|.+ -++|++.
T Consensus 210 ls~RvT~~~G~~v~~~nViP~~--w~~g~ty 238 (245)
T 2hcz_X 210 FSIRLTSESGKKVIAKDVIPAN--WRPDAVY 238 (245)
T ss_dssp CCEEEEETTSCEEEESCSCCSS--CCTTCEE
T ss_pred EEEEEEEeCCcEEEEeeeecCC--CCCCCEE
Confidence 6899999999987654 4444 4566655
No 76
>2vf7_A UVRA2, excinuclease ABC, subunit A.; DNA-binding protein, nucleotide-binding, zinc-binding domain, SOS response, metal-binding; HET: ADP; 2.30A {Deinococcus radiodurans} PDB: 2vf8_A*
Probab=26.45 E-value=26 Score=37.93 Aligned_cols=32 Identities=34% Similarity=0.757 Sum_probs=19.4
Q ss_pred eccCCcccceEEEEEecCCcceeEeEeeCCCCCCcc
Q 015732 147 KCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTG 182 (401)
Q Consensus 147 ~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G 182 (401)
.|+.|.|.|.+....+..| ....+|+.|+|+.
T Consensus 640 ~c~~c~g~G~~~~~~~f~~----~v~~~c~~c~G~r 671 (842)
T 2vf7_A 640 RCEHCQGEGWVMVELLFLP----SVYAPCPVCHGTR 671 (842)
T ss_dssp BCTTTTTCSEEEETTCSSS----CEEEECTTTTTCC
T ss_pred ccccccCCCccchhhhcCC----ccceecccccCcc
Confidence 3888888887644333322 3456677777654
No 77
>1gmu_A UREE; metallochaperone; 1.5A {Klebsiella aerogenes} SCOP: b.107.1.1 d.58.38.1 PDB: 1gmw_A 1gmw_D 1gmv_A
Probab=25.36 E-value=1.1e+02 Score=25.23 Aligned_cols=45 Identities=16% Similarity=0.153 Sum_probs=36.8
Q ss_pred eeccCCHHHHhCCcEEEEEecCCcEEEEEeCCCccccCCcEEEecC
Q 015732 258 VEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAIND 303 (401)
Q Consensus 258 ~~~~I~l~eAl~G~~~~i~~ldG~~l~i~ip~g~vi~~g~~~~i~g 303 (401)
-++.++..+. .--...+.|-+|+.+-|.+|.|..++.|+++....
T Consensus 16 ~~v~L~~~~r-~k~R~r~~t~~G~e~~l~L~r~~~L~dGDvL~~dd 60 (143)
T 1gmu_A 16 ASVTLPIDVR-VKSRVKVTLNDGRDAGLLLPRGLLLRGGDVLSNEE 60 (143)
T ss_dssp EEEEECHHHH-TCSEEEEECTTSCEEEEECCSSCCCCTTCEEECTT
T ss_pred eEEEeCHHHH-hcceEEEECCCCCEEEEECCCCcccCCCCEEEECC
Confidence 4467777776 44578889999999999999999999999997764
No 78
>1ny9_A Transcriptional activator TIPA-S; all alpha, globin like; NMR {Streptomyces lividans} SCOP: a.181.1.1
Probab=25.31 E-value=73 Score=25.97 Aligned_cols=53 Identities=21% Similarity=0.155 Sum_probs=35.4
Q ss_pred CCCCCCCH-HHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhCCccccccccccCc
Q 015732 5 ESRKNASQ-DDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGE 61 (401)
Q Consensus 5 gv~~~As~-~eIKkAYrkla~k~HPDkn~~~~kFk~I~~AYevLsd~~kR~~YD~~g~ 61 (401)
|++++... .+|-+.++.+...+.++. +++.|..|.+-|. .||.-++.||++|.
T Consensus 71 g~~p~s~eaq~l~~~h~~~l~~~~~~~--s~e~~~~L~~mYv--~D~rF~~~~d~~~~ 124 (143)
T 1ny9_A 71 GEPADSEGAMDAAEDHRQGIARNHYDC--GYEMHTCLGEMYV--SDERFTRNIDAAKP 124 (143)
T ss_dssp TCCTTCHHHHHHHHHHHHHHHHHSSCC--CHHHHHHHHHHTT--STHHHHHHHGGGST
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCCCC--CHHHHHHHHHHHh--cCHHHHHhHcccCh
Confidence 44444322 345555666544544543 5688888888876 79999999999864
No 79
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=24.83 E-value=12 Score=38.08 Aligned_cols=65 Identities=18% Similarity=0.469 Sum_probs=36.0
Q ss_pred ecCcccCCCCccC------CeeeccCCcccceEEEEE----ecCCcceeE-eEeeCCCCCCcceEEcCCCCCCCcCCc
Q 015732 131 ICTKCKGKGSKSG------ASMKCSGCQGSGMKVSIR----HLGPSMIQQ-MQHPCNECKGTGETINDKDRCPQCKGE 197 (401)
Q Consensus 131 ~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~----~~gpg~~~~-~~~~C~~C~G~G~~~~~~~~C~~C~G~ 197 (401)
.|..||+...... ....|..|+......... ...|..... -...|..|+..=.. ....|..||-.
T Consensus 13 ~C~~CH~~~~~~~~~~~~~~~~~C~~CH~~~~~~~~~~~~~~~~~h~~H~~~~~~C~~CH~~h~~--~~~~C~~CH~~ 88 (571)
T 1y0p_A 13 ECDSCHTPDGELSNDSLTYENTQCVSCHGTLAEVAETTKHEHYNAHASHFPGEVACTSCHSAHEK--SMVYCDSCHSF 88 (571)
T ss_dssp CGGGTSCTTCCCCCTTCHHHHHHHHHHHCCHHHHHTTSCCSSCCTTSCSCCSCCCGGGTCCSSSC--BCCGGGGTCCC
T ss_pred ChhhcCCCcccccccccccccchhhhhCcChhhcccccccccCCccccccCCCCCccccCccccC--CCccccccChh
Confidence 6999999874321 124699999753210000 000100000 13579999976432 34789999875
No 80
>1sif_A Ubiquitin; hydrophobic mutants, folding, stability, structural protein; 2.18A {Homo sapiens} SCOP: d.15.1.1
Probab=23.68 E-value=65 Score=23.82 Aligned_cols=25 Identities=28% Similarity=0.631 Sum_probs=16.4
Q ss_pred HhCCcEEEEEecCCcEEEEEeCCCc
Q 015732 267 ALCGFQFVITHLDGRQLLIKSQPGE 291 (401)
Q Consensus 267 Al~G~~~~i~~ldG~~l~i~ip~g~ 291 (401)
-|.|.++.|.+++|+.+.+.+++..
T Consensus 6 ~~~~~~i~v~~~~G~~~~l~v~~~~ 30 (88)
T 1sif_A 6 HLQGLQLFIKTLTGKTFTVEMEPSD 30 (88)
T ss_dssp ----CEEEEEETTSCEEEEECCTTS
T ss_pred cccceEEEEEeCCCCEEEEEECCCC
Confidence 3567888888888888777777654
No 81
>3irb_A Uncharacterized protein from DUF35 family; 13815350, protein with unknown function from DUF35 family, S genomics; 1.80A {Sulfolobus solfataricus}
Probab=22.45 E-value=1.4e+02 Score=24.52 Aligned_cols=22 Identities=23% Similarity=0.134 Sum_probs=15.7
Q ss_pred EeCCCccccCCcEEEecCCCCcC
Q 015732 286 KSQPGEVVKPDQFKAINDEGMPM 308 (401)
Q Consensus 286 ~ip~g~vi~~g~~~~i~g~Gmp~ 308 (401)
.+.+++ ++.|+.+++...+||.
T Consensus 119 ~~~~~~-v~iGm~V~vv~~~~Pv 140 (145)
T 3irb_A 119 CYAEGN-VKVGAKAKILSFQWPL 140 (145)
T ss_dssp EEEEES-CCTTCBCEEEECSSSC
T ss_pred cccCCc-CCCCCEEEEEEcCCCE
Confidence 333444 5778888888888885
No 82
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A
Probab=22.35 E-value=42 Score=36.86 Aligned_cols=32 Identities=28% Similarity=0.749 Sum_probs=20.4
Q ss_pred eccCCcccceEEEEEecCCcceeEeEeeCCCCCCcc
Q 015732 147 KCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTG 182 (401)
Q Consensus 147 ~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G 182 (401)
.|+.|.|.|.+....+.- .....+|+.|.|..
T Consensus 755 rC~~C~g~G~i~~em~fl----~~v~~~ce~c~G~r 786 (972)
T 2r6f_A 755 RCEACHGDGIIKIEMHFL----PDVYVPCEVCHGKR 786 (972)
T ss_dssp BCTTTTTCSEEEECCSSS----CCEEEECTTTTTCC
T ss_pred cccccccccceeeehhcc----cccccccccccccc
Confidence 499999999765433322 23456788887763
No 83
>1cf7_A Protein (transcription factor E2F-4); E2F, winged-helix, DNA-binding domain, cell cycle, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: a.4.5.17
Probab=22.22 E-value=75 Score=23.40 Aligned_cols=45 Identities=27% Similarity=0.223 Sum_probs=32.6
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhCCcccccccccc
Q 015732 8 KNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQY 59 (401)
Q Consensus 8 ~~As~~eIKkAYrkla~k~HPDkn~~~~kFk~I~~AYevLsd~~kR~~YD~~ 59 (401)
++.|...+-+.|-+|... +|+..-+ |++|-+.|.-.++|++||-.
T Consensus 8 ~~~SL~~lt~kFi~l~~~-~~~~~i~------l~~aa~~L~v~~kRRiYDI~ 52 (76)
T 1cf7_A 8 HEKSLGLLTTKFVSLLQE-AKDGVLD------LKLAADTLAVRQKRRIYDIT 52 (76)
T ss_dssp TTTCHHHHHHHHHHHHHH-SSTTEEE------HHHHHHHTTTCCTHHHHHHH
T ss_pred ccCcHHHHHHHHHHHHHh-CCCCcCc------HHHHHHHhCCccceehhhHH
Confidence 456777888888887664 4443322 78888888765799999974
No 84
>1ear_A Urease accessory protein UREE; chaperone, putative NI-chaperone, urease operon; 1.7A {Bacillus pasteurii} SCOP: b.107.1.1 d.58.38.1 PDB: 1eb0_A
Probab=22.05 E-value=1.2e+02 Score=25.13 Aligned_cols=44 Identities=9% Similarity=0.009 Sum_probs=36.0
Q ss_pred eccCCHHHHhCCcEEEEEecCCcEEEEEeCCCccccCCcEEEecC
Q 015732 259 EHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAIND 303 (401)
Q Consensus 259 ~~~I~l~eAl~G~~~~i~~ldG~~l~i~ip~g~vi~~g~~~~i~g 303 (401)
++.++..+. .--...+.|-+|+.+-|.+|.+..++.|+++....
T Consensus 22 ~v~L~~~~r-~k~R~r~~t~~G~e~~l~L~r~~~L~dGDvL~~dd 65 (147)
T 1ear_A 22 WLEVEWEDL-NKRILRKETENGTDIAIKLENSGTLRYGDVLYESD 65 (147)
T ss_dssp EEEECGGGG-GCSEEEEECTTCCEEEEECSSCCCCCTTEEEEECS
T ss_pred EEEeCHHHH-hcceeEEECCCCCEEEEECCCCcccCCCCEEEECC
Confidence 456676665 44478889999999999999999999999998864
No 85
>2ftc_B Mitochondrial ribosomal protein L2; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus} PDB: 3iy9_B
Probab=21.99 E-value=3.3e+02 Score=22.29 Aligned_cols=70 Identities=16% Similarity=0.164 Sum_probs=45.0
Q ss_pred EEEEEcCCCcCCCEEeccCC----------cCCC--CCCCcccEEEEEEEeeCCc--ceecCcceeeeccCCHHHHhCCc
Q 015732 206 LEVIVEKGMQNGQKITFPGE----------ADEA--PDTVTGDIVFVLQQKEHPK--FKRKGDDLFVEHTLSLTEALCGF 271 (401)
Q Consensus 206 l~V~Ip~G~~~G~~i~~~g~----------G~~~--~g~~~GDliv~i~~~~h~~--f~R~g~dL~~~~~I~l~eAl~G~ 271 (401)
--|--|.|++.|+.|..-.+ |+.. ...+.|.++..|+.+|-.. |.|.- |.
T Consensus 24 ~yIlAp~gl~~Gd~I~s~~~~g~~a~~i~~GN~lpL~~iP~Gt~IhNIE~~pG~gg~laRsA----------------Gt 87 (136)
T 2ftc_B 24 RWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAA----------------GT 87 (136)
T ss_pred EEEEeecCCcCCCEEEECCcccccccccCcCcEEEecccCCCCEEEEEeccCCCCcEEEEeC----------------CC
Confidence 35777999999999986322 3332 2456799999998887654 55542 33
Q ss_pred EEEEEecCCcEEEEEeCCCc
Q 015732 272 QFVITHLDGRQLLIKSQPGE 291 (401)
Q Consensus 272 ~~~i~~ldG~~l~i~ip~g~ 291 (401)
...|-.-++....|++|.|+
T Consensus 88 ~a~ii~ke~~~~~vrLPSGe 107 (136)
T 2ftc_B 88 CGVLLRKVNGTAIIQLPSKR 107 (136)
T ss_pred eEEEEEecCCEEEEECCCCC
Confidence 33333235666778877764
No 86
>2e2z_A TIM15; protein import, zinc finger, protein transport, chaperone regulator; NMR {Saccharomyces cerevisiae}
Probab=21.56 E-value=40 Score=26.37 Aligned_cols=11 Identities=18% Similarity=0.670 Sum_probs=6.6
Q ss_pred eeccCCcccce
Q 015732 146 MKCSGCQGSGM 156 (401)
Q Consensus 146 ~~C~~C~G~G~ 156 (401)
.||..|+.+-.
T Consensus 14 FTC~~C~tRs~ 24 (100)
T 2e2z_A 14 FTCKKCNTRSS 24 (100)
T ss_dssp EEETTTTEEEE
T ss_pred EEccCCCCcch
Confidence 46666666544
No 87
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=21.54 E-value=3e+02 Score=21.61 Aligned_cols=83 Identities=14% Similarity=0.201 Sum_probs=45.9
Q ss_pred EEEEEEEcCCCcCCCEEec-cCCcCCCCCCCcccEEEEEEEeeC--Cc---ceecCcceeeeccCCHHHHhCC-cEEEEE
Q 015732 204 KVLEVIVEKGMQNGQKITF-PGEADEAPDTVTGDIVFVLQQKEH--PK---FKRKGDDLFVEHTLSLTEALCG-FQFVIT 276 (401)
Q Consensus 204 ~~l~V~Ip~G~~~G~~i~~-~g~G~~~~g~~~GDliv~i~~~~h--~~---f~R~g~dL~~~~~I~l~eAl~G-~~~~i~ 276 (401)
..|.++|..|..+.--.++ ...|. .|| |..+.++.. .. .+|.|..--+... ..|.| +++.|.
T Consensus 13 ~~v~f~V~~~snp~~l~VlV~nv~G------~Gd-I~~V~Ik~~~~~~W~~M~rnGa~W~~~s~----~~L~GplSfRvt 81 (108)
T 2jnz_A 13 VQVTFTVQKGSDPKKLVLDIKYTRP------GDS-LAEVELRQHGSEEWEPLTKKGNVWEVKSS----KPLVGPFNFRFM 81 (108)
T ss_dssp CEEEEEECTTCCSSEEEEEEEEEBT------TBC-EEEEEEECTTCCCCEECEEETTEEEEECS----SCCCSSEEEEEE
T ss_pred ccEEEEEecCCCccEEEEEEEEeCC------CCC-EEEEEEEeCCCCcEeEccccCCEeEeCCC----CCCCCCEEEEEE
Confidence 3577777777776554333 22221 355 556666642 22 3455433332221 12455 688899
Q ss_pred ecCCcEEEEE--eCCCccccCCcEE
Q 015732 277 HLDGRQLLIK--SQPGEVVKPDQFK 299 (401)
Q Consensus 277 ~ldG~~l~i~--ip~g~vi~~g~~~ 299 (401)
+-||+++... ||++ -++|++.
T Consensus 82 ts~G~~~va~nViPa~--W~~Gqty 104 (108)
T 2jnz_A 82 SKGGMRNVFDEVIPTA--FSIGKTY 104 (108)
T ss_dssp ETTTEEEEEEEEECSS--CCTTCEE
T ss_pred EcCCcEEEECeEECCC--CCCCCEE
Confidence 9999876543 6655 5667654
No 88
>1mli_A Muconolactone isomerase; intramolecular oxidoreductase; 3.30A {Pseudomonas putida} SCOP: d.58.4.1
Probab=21.45 E-value=94 Score=24.08 Aligned_cols=23 Identities=22% Similarity=0.540 Sum_probs=18.5
Q ss_pred EEEEEEEeCCCCCCHHHHHHHHh
Q 015732 318 LYIHFTVDFPESLSPDQCKMLET 340 (401)
Q Consensus 318 L~v~~~V~~P~~l~~~~~~~l~~ 340 (401)
..|++.|++|..+++++...|+.
T Consensus 3 FlV~m~V~~P~~~~~~~~~~~~a 25 (96)
T 1mli_A 3 FHVKMTVKLPVDMDPAKATQLKA 25 (96)
T ss_pred EEEEEEeeCCCCCCHHHHHHHHH
Confidence 46899999999999988666543
No 89
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=20.29 E-value=60 Score=23.96 Aligned_cols=50 Identities=18% Similarity=0.333 Sum_probs=35.4
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCh------HHHHHHHHHHHHhCCc-cccccccccCc
Q 015732 11 SQDDLKKAYRKAAIKNHPDKGGDP------EKFKELAQAYEVLSDP-EKREIYDQYGE 61 (401)
Q Consensus 11 s~~eIKkAYrkla~k~HPDkn~~~------~kFk~I~~AYevLsd~-~kR~~YD~~g~ 61 (401)
-+.-++.+|+.+.+...|...... .+|..- .+|..+.++ +++.+|+.|-.
T Consensus 7 r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~-~~fkav~~E~eR~~lFeeYi~ 63 (77)
T 2cqn_A 7 GMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKE-PAFEDITLESERKRIFKDFMH 63 (77)
T ss_dssp SHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTS-HHHHTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccC-HHHHhcCCHHHHHHHHHHHHH
Confidence 456688999998777778876642 345444 489999775 66678888853
Done!