Query 015736
Match_columns 401
No_of_seqs 293 out of 1399
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 09:05:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015736.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015736hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2132 Uncharacterized conser 100.0 1.1E-69 2.3E-74 513.8 9.6 331 45-387 22-355 (355)
2 PF13621 Cupin_8: Cupin-like d 100.0 1.3E-47 2.7E-52 363.0 15.3 229 167-395 1-249 (251)
3 KOG2130 Phosphatidylserine-spe 100.0 1.3E-39 2.8E-44 306.3 14.8 234 153-396 50-301 (407)
4 KOG2508 Predicted phospholipas 99.9 1.8E-27 4E-32 227.9 13.3 233 163-396 29-312 (437)
5 KOG2131 Uncharacterized conser 99.9 3.1E-24 6.7E-29 206.3 7.7 228 158-395 29-305 (427)
6 COG2850 Uncharacterized conser 99.7 7.3E-18 1.6E-22 163.8 9.1 201 162-394 12-215 (383)
7 PF08007 Cupin_4: Cupin superf 99.7 3.1E-17 6.8E-22 162.0 9.0 97 281-394 114-212 (319)
8 PF02373 JmjC: JmjC domain, hy 99.3 1.8E-12 3.8E-17 108.3 2.6 106 285-391 2-114 (114)
9 KOG3706 Uncharacterized conser 99.1 2.1E-10 4.6E-15 114.6 8.4 89 279-382 315-405 (629)
10 KOG1633 F-box protein JEMMA an 98.3 2.2E-06 4.9E-11 92.9 10.4 203 169-392 9-230 (776)
11 KOG2132 Uncharacterized conser 98.3 4.3E-07 9.4E-12 87.8 2.8 113 285-400 178-295 (355)
12 KOG1356 Putative transcription 98.0 1.5E-06 3.3E-11 92.7 -0.3 224 166-396 529-837 (889)
13 COG2140 Thermophilic glucose-6 97.5 0.00042 9.1E-09 63.8 8.6 62 289-384 88-152 (209)
14 PF00190 Cupin_1: Cupin; Inte 97.1 0.002 4.3E-08 56.3 7.5 78 289-395 42-123 (144)
15 PF07883 Cupin_2: Cupin domain 96.4 0.0085 1.8E-07 45.0 5.7 57 289-384 6-63 (71)
16 PRK04190 glucose-6-phosphate i 96.4 0.024 5.2E-07 52.1 9.3 65 294-392 87-156 (191)
17 TIGR03037 anthran_nbaC 3-hydro 96.3 0.021 4.6E-07 50.7 8.2 69 286-389 33-101 (159)
18 PF06560 GPI: Glucose-6-phosph 96.3 0.006 1.3E-07 55.5 4.8 67 303-400 85-152 (182)
19 PRK13264 3-hydroxyanthranilate 95.9 0.034 7.3E-07 50.2 7.9 68 287-389 40-107 (177)
20 smart00558 JmjC A domain famil 95.9 0.0054 1.2E-07 44.7 2.1 28 283-310 28-57 (57)
21 TIGR03404 bicupin_oxalic bicup 95.6 0.079 1.7E-06 53.6 10.0 61 289-383 253-314 (367)
22 smart00835 Cupin_1 Cupin. This 95.2 0.18 3.8E-06 44.0 9.6 62 289-383 38-100 (146)
23 TIGR03404 bicupin_oxalic bicup 94.7 0.24 5.2E-06 50.2 10.3 66 285-385 72-137 (367)
24 COG1898 RfbC dTDP-4-dehydrorha 94.3 0.35 7.5E-06 43.7 9.3 90 281-398 45-138 (173)
25 PF06052 3-HAO: 3-hydroxyanthr 94.0 0.31 6.7E-06 42.7 8.1 69 285-388 37-105 (151)
26 PF02041 Auxin_BP: Auxin bindi 93.4 0.33 7.2E-06 42.5 7.1 73 280-382 41-115 (167)
27 COG1917 Uncharacterized conser 93.3 0.45 9.8E-06 40.5 8.0 69 283-390 45-116 (131)
28 TIGR01221 rmlC dTDP-4-dehydror 93.1 0.76 1.6E-05 41.7 9.5 81 282-390 45-130 (176)
29 PF05523 FdtA: WxcM-like, C-te 92.3 0.53 1.1E-05 40.5 7.0 71 288-394 40-112 (131)
30 COG0662 {ManC} Mannose-6-phosp 92.1 0.16 3.5E-06 43.3 3.6 25 359-383 76-100 (127)
31 PRK09943 DNA-binding transcrip 91.5 1.2 2.5E-05 40.5 8.7 37 359-395 147-183 (185)
32 TIGR02272 gentisate_1_2 gentis 91.4 0.5 1.1E-05 47.2 6.7 58 289-384 89-146 (335)
33 COG4101 Predicted mannose-6-ph 91.4 0.25 5.5E-06 41.5 3.7 25 359-383 89-113 (142)
34 PF00908 dTDP_sugar_isom: dTDP 90.4 1.6 3.4E-05 39.6 8.4 83 282-392 44-132 (176)
35 PLN00212 glutelin; Provisional 88.2 2.8 6.1E-05 44.1 9.4 66 290-388 357-423 (493)
36 TIGR02466 conserved hypothetic 88.1 3.6 7.8E-05 38.2 9.2 99 281-392 94-199 (201)
37 PF02311 AraC_binding: AraC-li 85.8 4.1 8.8E-05 33.5 7.6 56 289-383 11-66 (136)
38 KOG0958 DNA damage-responsive 85.7 0.41 8.8E-06 51.2 1.6 109 282-394 174-295 (690)
39 PRK13290 ectC L-ectoine syntha 85.1 1.7 3.6E-05 37.2 4.8 26 359-384 76-101 (125)
40 PF09313 DUF1971: Domain of un 82.6 9.1 0.0002 30.2 7.7 53 303-387 27-79 (82)
41 TIGR03214 ura-cupin putative a 82.3 5.9 0.00013 38.1 8.0 35 359-393 99-133 (260)
42 KOG2508 Predicted phospholipas 79.2 3.2 7E-05 41.5 5.0 44 351-394 354-404 (437)
43 PF13759 2OG-FeII_Oxy_5: Putat 78.2 3.2 6.9E-05 33.7 4.0 35 356-390 64-101 (101)
44 PF05899 Cupin_3: Protein of u 78.0 1.6 3.5E-05 33.6 2.0 16 359-374 45-60 (74)
45 PF01050 MannoseP_isomer: Mann 75.4 3.7 8.1E-05 36.3 3.9 25 359-383 103-127 (151)
46 TIGR01479 GMP_PMI mannose-1-ph 73.4 16 0.00035 38.2 8.7 27 358-384 415-441 (468)
47 COG3450 Predicted enzyme of th 71.8 3.3 7.1E-05 35.0 2.5 21 359-379 83-103 (116)
48 PF03079 ARD: ARD/ARD' family; 70.1 11 0.00023 33.6 5.6 39 356-394 113-152 (157)
49 TIGR03214 ura-cupin putative a 69.8 5.3 0.00011 38.5 3.8 26 358-383 218-243 (260)
50 PRK13502 transcriptional activ 67.2 21 0.00047 34.0 7.5 26 358-383 56-81 (282)
51 COG4766 EutQ Ethanolamine util 66.8 20 0.00044 31.6 6.4 17 358-374 136-152 (176)
52 TIGR02272 gentisate_1_2 gentis 66.4 22 0.00048 35.6 7.5 68 287-395 256-323 (335)
53 PRK15457 ethanolamine utilizat 66.2 9.6 0.00021 36.0 4.6 23 358-380 193-215 (233)
54 PRK11171 hypothetical protein; 64.5 10 0.00022 36.7 4.6 33 359-391 102-134 (266)
55 PF05995 CDO_I: Cysteine dioxy 63.3 34 0.00074 30.8 7.6 75 289-389 83-159 (175)
56 COG5285 Protein involved in bi 62.3 8.8 0.00019 37.5 3.7 51 341-394 179-232 (299)
57 PF06249 EutQ: Ethanolamine ut 60.1 6.8 0.00015 34.7 2.3 17 358-374 113-129 (152)
58 PLN00212 glutelin; Provisional 59.5 55 0.0012 34.6 9.2 85 287-384 87-174 (493)
59 COG1791 Uncharacterized conser 56.6 40 0.00086 30.5 6.5 51 295-381 91-141 (181)
60 KOG2107 Uncharacterized conser 56.2 16 0.00035 32.7 3.9 29 356-384 114-142 (179)
61 PRK15131 mannose-6-phosphate i 52.9 11 0.00024 38.6 2.8 23 358-380 237-259 (389)
62 PF10014 2OG-Fe_Oxy_2: 2OG-Fe 52.6 17 0.00036 33.5 3.7 61 295-382 117-178 (195)
63 PF13640 2OG-FeII_Oxy_3: 2OG-F 52.3 15 0.00032 29.2 3.0 30 362-391 66-99 (100)
64 PRK11171 hypothetical protein; 50.6 23 0.00051 34.1 4.5 36 358-393 223-258 (266)
65 KOG3995 3-hydroxyanthranilate 48.6 50 0.0011 30.8 6.0 68 285-387 37-104 (279)
66 PRK10296 DNA-binding transcrip 48.3 74 0.0016 30.2 7.7 22 359-380 62-83 (278)
67 COG3435 Gentisate 1,2-dioxygen 46.5 66 0.0014 31.7 6.7 71 280-389 258-331 (351)
68 TIGR00218 manA mannose-6-phosp 45.3 11 0.00025 36.9 1.5 21 358-378 151-171 (302)
69 COG5553 Predicted metal-depend 44.8 47 0.001 29.7 5.0 25 289-313 81-105 (191)
70 COG1482 ManA Phosphomannose is 44.5 17 0.00037 36.0 2.5 24 358-381 158-181 (312)
71 COG3435 Gentisate 1,2-dioxygen 44.5 42 0.00091 33.1 5.1 55 290-382 101-155 (351)
72 PRK15460 cpsB mannose-1-phosph 43.9 32 0.00069 36.2 4.6 30 358-387 424-453 (478)
73 TIGR03027 pepcterm_export puta 42.2 16 0.00034 32.5 1.8 17 359-375 149-165 (165)
74 PLN02288 mannose-6-phosphate i 41.5 17 0.00037 37.2 2.1 23 358-380 251-273 (394)
75 PRK05467 Fe(II)-dependent oxyg 41.3 37 0.0008 32.1 4.2 39 358-396 141-181 (226)
76 PRK13501 transcriptional activ 41.1 31 0.00066 33.2 3.8 26 358-383 56-81 (290)
77 PF12852 Cupin_6: Cupin 38.5 28 0.00061 31.2 2.9 25 359-383 56-80 (186)
78 COG4297 Uncharacterized protei 36.4 1.1E+02 0.0024 26.7 5.8 30 358-387 85-114 (163)
79 PF15138 Syncollin: Syncollin 35.5 39 0.00084 27.9 2.8 39 357-395 34-75 (112)
80 COG3822 ABC-type sugar transpo 35.2 1.3E+02 0.0027 27.8 6.3 27 357-383 152-178 (225)
81 TIGR02297 HpaA 4-hydroxyphenyl 34.4 85 0.0018 29.8 5.7 24 359-382 63-86 (287)
82 PRK13500 transcriptional activ 33.7 52 0.0011 32.2 4.1 26 358-383 86-111 (312)
83 PRK10371 DNA-binding transcrip 32.2 1.1E+02 0.0024 29.8 6.1 61 284-383 29-89 (302)
84 PF12973 Cupin_7: ChrR Cupin-l 31.7 63 0.0014 25.4 3.5 25 361-385 61-85 (91)
85 TIGR03028 EpsE polysaccharide 29.6 28 0.00061 32.9 1.4 15 361-375 225-239 (239)
86 smart00702 P4Hc Prolyl 4-hydro 29.1 67 0.0014 28.4 3.7 36 357-392 138-178 (178)
87 PF07385 DUF1498: Protein of u 28.0 1E+02 0.0022 29.0 4.7 86 285-384 91-180 (225)
88 PF12854 PPR_1: PPR repeat 27.7 77 0.0017 20.1 2.8 26 67-94 6-31 (34)
89 PF11699 CENP-C_C: Mif2/CENP-C 24.9 1.4E+02 0.003 23.7 4.3 26 359-384 52-77 (85)
90 PF01238 PMI_typeI: Phosphoman 22.8 55 0.0012 33.3 2.1 23 358-380 250-272 (373)
91 PRK12335 tellurite resistance 21.6 4.2E+02 0.009 25.5 7.9 59 302-392 34-94 (287)
No 1
>KOG2132 consensus Uncharacterized conserved protein, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-69 Score=513.83 Aligned_cols=331 Identities=45% Similarity=0.745 Sum_probs=281.3
Q ss_pred HHHHHHhhhccccCCCCCchHHHHHHHHHHHHHHhhccCCcHHHHHHHHHhhhccCCCcchhHHHHHHHHhhhhhhcCCC
Q 015736 45 ARDLAWEQLHSGPWHSVLPVWRDAYSMACLHGAKYHYRNGEFKEALRVLDMGVLMGGPVLRKDLDSAIETLSLKAREGEN 124 (401)
Q Consensus 45 ~~~~a~e~l~~g~~~~v~~~wr~~y~~~~l~~~~~~~~~~~~~~~~~~ld~~li~g~~~~~~~~~~~~~~~~~~~~~~~~ 124 (401)
++++||||||+|||++|+..||++|+++|+++++..++++.+.+|+| ||||++||+...... ++.+++....+..
T Consensus 22 ~l~~awe~l~tg~~~~v~~~wr~~y~~~c~~~~~~~~~~~~~~~al~-~D~gllmg~~~~~d~----~l~va~~~~~~~~ 96 (355)
T KOG2132|consen 22 ALDPAWEKLNTGHWSFVDRVWRRLYAIACLAKALIEFQAPLVYAALK-LDMGLLMGNIGLGDS----LLKVASELKFGYY 96 (355)
T ss_pred ccCchhhhhccCccccCCchHHHHHHHHHHHHHHhhcccchhHHHHh-hCHHHHhhchhcchH----HHHHHHHhhccCc
Confidence 58999999999999999999999999999999999999999999999 999999998765221 1222222211111
Q ss_pred cccccccccccccc-ccchhhhhccCCCCCcCCCcccccCCCCHHHHHHhhhcCCCcEEEecCCCCCccCCCCCcHHHHH
Q 015736 125 ERFGEREANRLVSE-EFNTAKALQVLPNRSLSCKLVVKRSALSLEGFLSEYFLSGSPVIITDCMAHWPARTNWNDLDYLK 203 (401)
Q Consensus 125 ~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~i~r~~~lS~e~F~~~y~~~~~PvVi~g~~~~WpA~~~Wt~~~yL~ 203 (401)
.+..-. ...-.. +.....+...+|.... +..+++.+.+++++|..+++.+++|++++|.+.||||.++|+ ++|+.
T Consensus 97 ~~~~~~--~~~~~~p~~e~~~~~~~ip~~~~-~~~~~~~~~~~l~~~l~d~~~~~~p~~~l~~~~hwpa~~kw~-l~~l~ 172 (355)
T KOG2132|consen 97 SDKPAA--VALNFKPNREENKVHEFIPKVQL-EIDVPGEDRLSLQEFLNDTVGRGTPVILLGFNWHWPAIQKWS-LGYLQ 172 (355)
T ss_pred ccchhh--hhccCCCCccccccccccchhhh-hhhhccccchHHHHHHHHhhcCCCceEEecccccchHhhhcc-hhHHH
Confidence 000000 000000 1111223444555333 567888899999999999999999999999999999999995 99999
Q ss_pred HHhCCceEEEEeCcccccCCceeeecCHHHHHHHHHhCCCCCCCCceeeccchhhhhHhhhccCCCCCccccCCccc--c
Q 015736 204 RVAGDRTVPVEVGKNYLCQDWKQELIPFSQFLERIQSNGSSASVPTYLAQHQLFDQINELRNDICIPDYCFVGGGEL--R 281 (401)
Q Consensus 204 ~~~G~~~V~ve~g~~y~~~~w~~~~mt~~eFl~~~~~~~~~~~~~~YL~q~~l~~~~p~L~~Di~~P~~~~~~~~~~--~ 281 (401)
+..|.|+|+||+|.+|.+.+|.|..|++.+|+.++.... +..++|++||.+|+|+|+++.||.+||||+..+.+. .
T Consensus 173 ~va~~rTvpvEvg~~y~~~~w~q~l~t~~~g~~R~~~~~--p~~~~YlAqh~lfdqi~elk~Di~iPDyc~~~~f~~~~v 250 (355)
T KOG2132|consen 173 QVAGNRTVPVEVGSTYADEDWSQNLMTQIKGIKRCILFE--PRECLYLAQHHLFDQIPELKFDISIPDYCSFPNFENEVV 250 (355)
T ss_pred hcccceeeeeecccccchhHHHhhhHHHhhhhhhhhcCC--ccccchhhhhhhhccchhhhhccCCCceeecCCCCcccc
Confidence 999999999999999999999999999999999998876 457899999999999999999999999998766554 6
Q ss_pred ccceeeccCCCCCccccccCCceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEEE
Q 015736 282 SLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCI 361 (401)
Q Consensus 282 ~~~~W~Gp~gt~splH~D~~~n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~i 361 (401)
..++|+||+||+||+|+|++||+++||.|+|+|+|++|..++.+||+...++. |||||+++||++.||+|++++.++|+
T Consensus 251 ~~~~w~GpaGtV~pih~dp~hNi~~qv~G~k~i~l~~p~~s~~lyP~d~~~~~-tsqvdvenPdlk~fp~~~k~~~l~~l 329 (355)
T KOG2132|consen 251 DINAWIGPAGTVLPIHMDPWHNILSQVFGRKRIRLYPPEDSGALYPTDTYLLE-TSQVDVENPDLKAFPKFAKARFLDCL 329 (355)
T ss_pred ceeEEeccCCceeccccccccceeeeeecceEEEEecCcccCCCCCccchhhc-ccccccCCCChhhhhHHHHHHHHHHh
Confidence 88999999999999999999999999999999999999999999999877655 99999999999999999999999999
Q ss_pred EcCCCEEEeCCCceEEEEecCceEEE
Q 015736 362 LDEGEMLYIPPKWWHYVRSLSISFSV 387 (401)
Q Consensus 362 L~pGD~LyIP~gWwH~V~sl~~siSV 387 (401)
|+|||+||||+.|||+|++++.|+|+
T Consensus 330 L~pGe~L~iP~kwwhyvrs~d~s~s~ 355 (355)
T KOG2132|consen 330 LEPGEALFIPPKWWHYVRSLDKSFSV 355 (355)
T ss_pred cCCchhccccHHHhhhhhhccccccC
Confidence 99999999999999999999999875
No 2
>PF13621 Cupin_8: Cupin-like domain; PDB: 3AL6_C 3AL5_C 2XUM_A 2Y0I_A 1MZE_A 3KCY_A 1MZF_A 1YCI_A 2ILM_A 1H2L_A ....
Probab=100.00 E-value=1.3e-47 Score=362.96 Aligned_cols=229 Identities=40% Similarity=0.712 Sum_probs=176.7
Q ss_pred HHHHHHhhhcCCCcEEEecCCCCCccCCCCCc----HHHHHHHhCCceEEEEeCcc-----cc------cCCceeeecCH
Q 015736 167 LEGFLSEYFLSGSPVIITDCMAHWPARTNWND----LDYLKRVAGDRTVPVEVGKN-----YL------CQDWKQELIPF 231 (401)
Q Consensus 167 ~e~F~~~y~~~~~PvVi~g~~~~WpA~~~Wt~----~~yL~~~~G~~~V~ve~g~~-----y~------~~~w~~~~mt~ 231 (401)
+++|+++|+.+++||||+|++.+|||+++|++ ++||.+.+|+..|++..... +. ....+...|+|
T Consensus 1 p~eF~~~~~~~~~PvVi~g~~~~w~a~~~W~~~~~~~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (251)
T PF13621_consen 1 PEEFFERYVKPNKPVVIRGAAADWPAFQKWTDDEYLLDYLKEKYGDVPVPVRDSPNGISDSFGYNDDRKFVNFERERMPF 80 (251)
T ss_dssp -HHHHHHTCCTT--EEEESSSTTCCHHHH-S-----HHHHHHHHTSSEEEEEEEST--SSBTS-B-GCCCTCEEEEEEEH
T ss_pred CHHHHHHHhCCCCCEEEeCCccCCchhhhccchhHHHHHHHHHcCCeEEEEEecCCcccccccccccccccCCeeEECcH
Confidence 58999999999999999999999999999995 69999999999999975431 11 12346789999
Q ss_pred HHHHHHHHhCCCC-CCCCceeeccchhhhhHhhhccCCCCCccccCCccccccceeeccCCCCCccccccCCceeEEEee
Q 015736 232 SQFLERIQSNGSS-ASVPTYLAQHQLFDQINELRNDICIPDYCFVGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVG 310 (401)
Q Consensus 232 ~eFl~~~~~~~~~-~~~~~YL~q~~l~~~~p~L~~Di~~P~~~~~~~~~~~~~~~W~Gp~gt~splH~D~~~n~l~qV~G 310 (401)
++|++.+...... .....|+.+..+.+.+|+|.+|..+|.............++|||++|++|++|+|+.+||+|||+|
T Consensus 81 ~~f~~~~~~~~~~~~~~~~y~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~ig~~gs~t~lH~D~~~n~~~~i~G 160 (251)
T PF13621_consen 81 RDFLDRLRANRDQRDKPYYYLQNWNLFEDFPELREDNDLPFPPELFGKEPQSSNLWIGPPGSFTPLHYDPSHNLLAQIRG 160 (251)
T ss_dssp HHHHHHHHHSCHSTSSSEEEEEEETHHHHSHHHHCCS-CHHHHCHSCCHCCEEEEEEE-TTEEEEEEE-SSEEEEEEEES
T ss_pred HHHHHHHHhcccccCCceEEEecCchHHHhhhhhhccccccchhhcccCccccEEEEeCCCceeeeeECchhhhhhccCC
Confidence 9999999877521 346789998899999999999866552111112224567999999999999999999999999999
Q ss_pred eeEEEEecCCCCCccccCcccc-cCCCCcccCCCcccccCCCCCCCceEEEEEcCCCEEEeCCCceEEEEec--Cc-eEE
Q 015736 311 KKYIRLYPASLSEELYPYSETM-LCNSSQVDLDNIDETKFPKVRDLEFFDCILDEGEMLYIPPKWWHYVRSL--SI-SFS 386 (401)
Q Consensus 311 ~K~~~L~pP~~~~~Lyp~~~~~-~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~pGD~LyIP~gWwH~V~sl--~~-siS 386 (401)
+|+|+||||.+...||+..... ..+.|.+|++++|.++||.+++++.++|+|+|||+||||+||||+|+|+ ++ |||
T Consensus 161 ~K~~~L~pP~~~~~l~~~~~~~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~l~pGD~LfiP~gWwH~V~~~~~~~~sis 240 (251)
T PF13621_consen 161 RKRWILFPPDDSPNLYPRPDSHGGTVFSWVDPDNPDLERFPKFRKAPPYEVVLEPGDVLFIPPGWWHQVENLSDDDLSIS 240 (251)
T ss_dssp EEEEEEE-GGGGGGCTBETTTST-TCBBSS-TTS--TTT-CGGGG--EEEEEEETT-EEEE-TT-EEEEEESTTSSCEEE
T ss_pred CEEEEEECCccccccccceecccccceeeeeccChhhhhhhhhccCceeEEEECCCeEEEECCCCeEEEEEcCCCCeEEE
Confidence 9999999999999999876322 2467889999999999999999999999999999999999999999999 76 999
Q ss_pred EEeccCCCC
Q 015736 387 VSFWWSDGG 395 (401)
Q Consensus 387 Vs~wf~~~~ 395 (401)
||+||++..
T Consensus 241 vn~w~~~~~ 249 (251)
T PF13621_consen 241 VNYWFRTPF 249 (251)
T ss_dssp EEEEEESS-
T ss_pred EEEEecccc
Confidence 999999864
No 3
>KOG2130 consensus Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-39 Score=306.34 Aligned_cols=234 Identities=21% Similarity=0.419 Sum_probs=190.7
Q ss_pred CcCCCcccccCCCCHHHHHHhhhcCCCcEEEecCCCCCccCCCCCcHHHHHHHhCCceEEEEeCcccccCCceeeecCHH
Q 015736 153 SLSCKLVVKRSALSLEGFLSEYFLSGSPVIITDCMAHWPARTNWNDLDYLKRVAGDRTVPVEVGKNYLCQDWKQELIPFS 232 (401)
Q Consensus 153 ~~~~~~i~r~~~lS~e~F~~~y~~~~~PvVi~g~~~~WpA~~~Wt~~~yL~~~~G~~~V~ve~g~~y~~~~w~~~~mt~~ 232 (401)
.+...++.|..++|.|+|.++|-.+.+||||+|+.+.|||..+|| +++|.++||+..+.+. .. ++--...|+|+
T Consensus 50 ~~dn~~r~~~~~isveeF~~~ferp~kPVll~g~~DgW~A~ekWT-~drLskkyrnq~Fkcg--ed---~~gnsv~MKmk 123 (407)
T KOG2130|consen 50 FFDNGNRERRRNISVEEFIERFERPYKPVLLSGLTDGWPASEKWT-LDRLSKKYRNQKFKCG--ED---NNGNSVKMKMK 123 (407)
T ss_pred ccccchhhhhcCCCHHHHHHHhcccCCceEeeccccCCchhhhhh-HHHHHHHhcCcccccc--cc---CCCcceeeeHH
Confidence 444567788899999999999999999999999999999999999 9999999999877663 22 22235789999
Q ss_pred HHHHHHHhCCCCCCCCceeeccchhhhhH--hhhccCCCCCcccc-----CCccccccceee--ccCCCCCccccccC--
Q 015736 233 QFLERIQSNGSSASVPTYLAQHQLFDQIN--ELRNDICIPDYCFV-----GGGELRSLNAWF--GPAGTVTPLHHDPH-- 301 (401)
Q Consensus 233 eFl~~~~~~~~~~~~~~YL~q~~l~~~~p--~L~~Di~~P~~~~~-----~~~~~~~~~~W~--Gp~gt~splH~D~~-- 301 (401)
.|+++|.+.. ++.|+|+++..+-++.| .|.+|+.+|.||.. .+.+.++.+.|| ||++++|.+|.||.
T Consensus 124 yY~~Ym~~~R--ddsPLYiFDssFgE~~~~rkLl~dY~VPk~F~dDlF~y~g~e~RPpyRWfvmGParSGtsiHIDPlgT 201 (407)
T KOG2130|consen 124 YYIEYMKSTR--DDSPLYIFDSSFGEHAPRRKLLEDYSVPKYFRDDLFQYLGEERRPPYRWFVMGPARSGTSIHIDPLGT 201 (407)
T ss_pred HHHHHHhccc--cCCCeEEecchhhcccchhhhhhhcCcchhhhHHHHHhcCcccCCCceeEEecCCCCCceeEECCcch
Confidence 9999999887 89999999998888888 89999999998753 233446788886 99999999999997
Q ss_pred CceeEEEeeeeEEEEecCCCCCc-cccCcccccCCCCcccCCCcc-----cccCCCCCC-CceEEEEEcCCCEEEeCCCc
Q 015736 302 HNILAQVVGKKYIRLYPASLSEE-LYPYSETMLCNSSQVDLDNID-----ETKFPKVRD-LEFFDCILDEGEMLYIPPKW 374 (401)
Q Consensus 302 ~n~l~qV~G~K~~~L~pP~~~~~-Lyp~~~~~~~ntS~vD~~~~d-----~~~fP~~~~-a~~~e~iL~pGD~LyIP~gW 374 (401)
..|++.|+|+|+|.||||...+. +.+.... ....++.+..|- ..++|.... -.++||++.|||++|||.||
T Consensus 202 SAWNtll~GhKrW~LfPp~~p~~lvkv~~~e--~g~~~de~itwf~~~y~rt~~Pswp~E~kPIEc~q~pGEt~fVP~GW 279 (407)
T KOG2130|consen 202 SAWNTLLQGHKRWVLFPPGTPPELVKVTVDE--GGKQPDEIITWFSTIYPRTQLPSWPDEYKPIECLQKPGETMFVPSGW 279 (407)
T ss_pred HHHHHHhhccceeEEcCCCCCCCceeecccc--cCCCCcceechhhhccccccCCCCccccCCceeeecCCceEEecCCe
Confidence 47999999999999999998754 3443322 112334444333 334444433 36899999999999999999
Q ss_pred eEEEEecCceEEEEeccCCCCC
Q 015736 375 WHYVRSLSISFSVSFWWSDGGS 396 (401)
Q Consensus 375 wH~V~sl~~siSVs~wf~~~~~ 396 (401)
||-|.|++++|+|+++|.+.+.
T Consensus 280 WHvVlNle~TIAiTqNf~s~eN 301 (407)
T KOG2130|consen 280 WHVVLNLEPTIAITQNFASKEN 301 (407)
T ss_pred EEEEeccCceeeeeeccccccC
Confidence 9999999999999999988764
No 4
>KOG2508 consensus Predicted phospholipase [Lipid transport and metabolism]
Probab=99.95 E-value=1.8e-27 Score=227.92 Aligned_cols=233 Identities=24% Similarity=0.440 Sum_probs=172.3
Q ss_pred CCCCHHHHHHhhhcCCCcEEEecCCCCCccCCCCCcHHHHHHHhCCceEEEEeCcc-cccC------Cc----eeeecCH
Q 015736 163 SALSLEGFLSEYFLSGSPVIITDCMAHWPARTNWNDLDYLKRVAGDRTVPVEVGKN-YLCQ------DW----KQELIPF 231 (401)
Q Consensus 163 ~~lS~e~F~~~y~~~~~PvVi~g~~~~WpA~~~Wt~~~yL~~~~G~~~V~ve~g~~-y~~~------~w----~~~~mt~ 231 (401)
..||+-+|.++|+.+++||||+.+..||||+++|+..+||++..|++.|.|++..+ |.+. +. ..++|++
T Consensus 29 ~~Ptpl~Fyr~fvs~n~PvIIrkAL~hWpal~lWs~p~Yl~~algd~vvsvaitPngyadgav~~g~e~f~~pae~Klkl 108 (437)
T KOG2508|consen 29 LTPTPLDFYRKFVSTNTPVIIRKALPHWPALKLWSQPDYLLSALGDIVVSVAITPNGYADGAVMSGNEMFIKPAEQKLKL 108 (437)
T ss_pred CCCchHHHHHhhhcCCCcEEEecccccCchhhccCchHHHHHhccCeEEEEEeCCCCccccccccCcceeechhhhhccc
Confidence 36789999999999999999999999999999999888999999999999998654 3221 10 1125566
Q ss_pred HHHHHHHHhCCCCCCCCceeecc--chhhhhHhhhccCCCCCcccc---CCccccccceeeccCCCCCccccccCCceeE
Q 015736 232 SQFLERIQSNGSSASVPTYLAQH--QLFDQINELRNDICIPDYCFV---GGGELRSLNAWFGPAGTVTPLHHDPHHNILA 306 (401)
Q Consensus 232 ~eFl~~~~~~~~~~~~~~YL~q~--~l~~~~p~L~~Di~~P~~~~~---~~~~~~~~~~W~Gp~gt~splH~D~~~n~l~ 306 (401)
++-+....... .....+|+.+. +|...+|.|..|...-++-++ .+......|+|||...++|.+|+|+++|++|
T Consensus 109 sevL~vl~~~~-~~~~Vly~qkQ~snl~~elp~la~Dl~~~d~~wa~eafgk~PdavNlWiG~~~avTSlHkDhyENlYa 187 (437)
T KOG2508|consen 109 SEVLYVLTQYD-ESNEVLYGQKQNSNLVKELPPLATDLLLTDFSWAPEAFGKVPDAVNLWIGKSEAVTSLHKDHYENLYA 187 (437)
T ss_pred hhhheehhccc-CCCceeehhhhcccccccccccccccccccccccHHHhCCChhheeeeecccccccccccccccceEE
Confidence 66665554433 25577888753 355667777766655443221 1223356899999999999999999999999
Q ss_pred EEeeeeEEEEecCCCCCc----cccCcccccC-C-------------------CCcccCC-C-----cccccCCCCCC-C
Q 015736 307 QVVGKKYIRLYPASLSEE----LYPYSETMLC-N-------------------SSQVDLD-N-----IDETKFPKVRD-L 355 (401)
Q Consensus 307 qV~G~K~~~L~pP~~~~~----Lyp~~~~~~~-n-------------------tS~vD~~-~-----~d~~~fP~~~~-a 355 (401)
+|.|.|+|.|+||++.+. +||......+ . .+.+|.- . .+.+++|.+.. .
T Consensus 188 ViSGeKhFvlipP~d~~~lp~eiyp~g~ysy~~e~g~fk~e~~dEe~~~~a~~~~svd~~~s~~~~a~~~~k~~l~~~~~ 267 (437)
T KOG2508|consen 188 VISGEKHFVLIPPDDANQLPLEIYPNGLYSYEGEDGPFKSEGLDEEDAAIAKTWFSVDPIGSPKELAVPQEKIPLLEAEY 267 (437)
T ss_pred EEeccceEEEeCcccccccceeecCCcceeeecCCCceeecccchhhhhhcceeeeecccCCHHHhccchhhCccccccc
Confidence 999999999999998754 4554321111 0 0112221 1 25578887755 6
Q ss_pred ceEEEEEcCCCEEEeCCCceEEEEec----CceEEEEeccCCCCC
Q 015736 356 EFFDCILDEGEMLYIPPKWWHYVRSL----SISFSVSFWWSDGGS 396 (401)
Q Consensus 356 ~~~e~iL~pGD~LyIP~gWwH~V~sl----~~siSVs~wf~~~~~ 396 (401)
...-+.+.+|+++|.|..|.|+|... .-.|+||+|......
T Consensus 268 k~~~~rv~a~~i~~lp~~w~h~~sq~~gd~~~~Iavn~~~d~~~d 312 (437)
T KOG2508|consen 268 KPEMDRVLAGQILYLPEDWFHHVSQVGGDPESDIAVNEWYDIEAD 312 (437)
T ss_pred cceeeeeeccccccChhhhhhhccccCCCccceeEEeeecccccc
Confidence 77889999999999999999999988 469999999876543
No 5
>KOG2131 consensus Uncharacterized conserved protein, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms]
Probab=99.90 E-value=3.1e-24 Score=206.35 Aligned_cols=228 Identities=20% Similarity=0.301 Sum_probs=147.4
Q ss_pred cccccCC--CCHHHHHHhhhcCCCcEEEecCCCCCccC----CCCCcH------HHHHHHhCCceEEEE-----eCcccc
Q 015736 158 LVVKRSA--LSLEGFLSEYFLSGSPVIITDCMAHWPAR----TNWNDL------DYLKRVAGDRTVPVE-----VGKNYL 220 (401)
Q Consensus 158 ~i~r~~~--lS~e~F~~~y~~~~~PvVi~g~~~~WpA~----~~Wt~~------~yL~~~~G~~~V~ve-----~g~~y~ 220 (401)
.|+|+.. ++.+.|.+.|..++.||+|.++..+|++. ..|.|+ .-+...|+.+.|... ....-.
T Consensus 29 ~v~r~~g~~~d~~~~a~~~~~k~~~v~is~v~~d~~~~~~~~~s~~dl~~~~~l~n~~~~f~k~~v~~~~~~v~~~~~s~ 108 (427)
T KOG2131|consen 29 CVLRLIGPTADYGDFAERDTHKRPGVLISYVLEDWPCVSRDNESGADLNNNPDLKNFARSFAKRIVQNGDKNVFLCDLSL 108 (427)
T ss_pred hhhhhcccccCcccchhhhcccCCCccccccccCcccccCCCcchhhhccCcchhHHHHHHhHHHHhcCCcccccccccc
Confidence 5666655 78899999999999999999999999998 455431 112222333333222 111100
Q ss_pred cCCceeeecCHHHHHHHHHhCCCC----------------------CCCCceeeccchhhhhHhhhccCCCCCccccCC-
Q 015736 221 CQDWKQELIPFSQFLERIQSNGSS----------------------ASVPTYLAQHQLFDQINELRNDICIPDYCFVGG- 277 (401)
Q Consensus 221 ~~~w~~~~mt~~eFl~~~~~~~~~----------------------~~~~~YL~q~~l~~~~p~L~~Di~~P~~~~~~~- 277 (401)
..+.+.-.+++.+|+....+.... ....+|+.++.|+.++|. ..-+..|++|....
T Consensus 109 f~~~~~Le~ny~d~~v~~a~~~e~e~~~l~lad~~~~e~~~~~~~~q~p~ly~kDwHL~~~~d~-~~~~~~pd~F~~dwl 187 (427)
T KOG2131|consen 109 FPDYEYLERNYGDFVVPVANCNEKERYSLKLADWEFREEQVQLACPQAPSLYGKDWHLYRFLDN-DFPYWTPDLFAKDWL 187 (427)
T ss_pred CccHHHHHhhhhhcchhhccccchhhhhhhhccchhHHHhHhhhcCCCccccccchheeeecCc-ccccccchhhhhccc
Confidence 122334455666666655443322 223455555555554441 11124566664311
Q ss_pred ------ccc-cccceeeccCCCCCccccccCC--ceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCccccc
Q 015736 278 ------GEL-RSLNAWFGPAGTVTPLHHDPHH--NILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETK 348 (401)
Q Consensus 278 ------~~~-~~~~~W~Gp~gt~splH~D~~~--n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~ 348 (401)
++. .-..+++||+||.||+|.|.++ .|-+.|.|+|+|.|+||.+...|+-.-.. -++++..+-++.
T Consensus 188 ne~~i~~~~ddyrFvy~Gp~gSwtp~HaDVf~s~swS~nicG~KrWl~~pP~qe~~l~dr~gn-----lp~~~~~~~ld~ 262 (427)
T KOG2131|consen 188 NEFVIDGESDDYRFVYAGPAGSWTPFHADVFHSPSWSVNICGRKRWLLYPPEQEQTLADRYGN-----LPLPSWITKLDL 262 (427)
T ss_pred chhhccCCCCceeEEEeccCCCCCccchhhhcCCcceeeeecceeEEEeChHHhhhhhhhccC-----cCCccccccccc
Confidence 111 1235678999999999999985 68999999999999999998777653221 123332222222
Q ss_pred CCCCCCCceEEEEEcCCCEEEeCCCceEEEEecCceEEEEeccCCCC
Q 015736 349 FPKVRDLEFFDCILDEGEMLYIPPKWWHYVRSLSISFSVSFWWSDGG 395 (401)
Q Consensus 349 fP~~~~a~~~e~iL~pGD~LyIP~gWwH~V~sl~~siSVs~wf~~~~ 395 (401)
| ..++++++++|||++|+|+||.|||.||+++||||.+|.+..
T Consensus 263 ~----~~~~lei~Qepge~VFvPsGW~hQV~NL~dTISINHNW~N~~ 305 (427)
T KOG2131|consen 263 F----RGPLLEIFQEPGETVFVPSGWHHQVLNLGDTISINHNWCNAT 305 (427)
T ss_pred c----ccchhhhhccCCceeeccCccccccccccceeeecccccccc
Confidence 2 246699999999999999999999999999999999998864
No 6
>COG2850 Uncharacterized conserved protein [Function unknown]
Probab=99.73 E-value=7.3e-18 Score=163.79 Aligned_cols=201 Identities=20% Similarity=0.272 Sum_probs=130.7
Q ss_pred cCCCCHHHHHHhhhcCCCcEEEecCCCCCccCCCCCcHHHHHHHhCCceEEEEeCcccccCCceeeecCHHHHHHHHHhC
Q 015736 162 RSALSLEGFLSEYFLSGSPVIITDCMAHWPARTNWNDLDYLKRVAGDRTVPVEVGKNYLCQDWKQELIPFSQFLERIQSN 241 (401)
Q Consensus 162 ~~~lS~e~F~~~y~~~~~PvVi~g~~~~WpA~~~Wt~~~yL~~~~G~~~V~ve~g~~y~~~~w~~~~mt~~eFl~~~~~~ 241 (401)
...+|+++|+++|+ .+||+||||+..+. ...-+ .+-|.+.+-...|.-..-....+..|.-..-+|.++=..-.
T Consensus 12 ~~glt~~~FL~~YW-qkKPlliR~a~p~~--~~p~~-pdeLa~La~~edV~srLV~~~~~~~w~~~~gPfe~~d~~~~-- 85 (383)
T COG2850 12 PLGLTPEDFLRDYW-QKKPLLIRNAFPEF--HSPLS-PDELAGLAQEEDVTSRLVSHESDGTWQVSHGPFEEEDFLGL-- 85 (383)
T ss_pred cCCCCHHHHHHHHh-hhcchHHhhccccc--ccCCC-HHHHHHHhccccccchhhhhccCCceeEeeCccchhccccC--
Confidence 46789999999999 79999999988552 22333 45577666544443332222224567666667766532211
Q ss_pred CCCCCCCceeecc--chhhhhHhhhccCC-CCCccccCCccccccceeeccCCCCCccccccCCceeEEEeeeeEEEEec
Q 015736 242 GSSASVPTYLAQH--QLFDQINELRNDIC-IPDYCFVGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYP 318 (401)
Q Consensus 242 ~~~~~~~~YL~q~--~l~~~~p~L~~Di~-~P~~~~~~~~~~~~~~~W~Gp~gt~splH~D~~~n~l~qV~G~K~~~L~p 318 (401)
.....-+.|. ....+...|.+.+. +|++ ....+.+-+.+.|.+...|+|.|++|+.|..|+|||++-.
T Consensus 86 ---p~~wsllvq~vd~w~p~v~~l~~~FrflP~w------r~ddiMIS~a~~GGgvg~H~D~YDVfliQg~G~RRW~v~~ 156 (383)
T COG2850 86 ---PRNWSLLVQAVDHWHPEVAALMEPFRFLPDW------RIDDIMISFAAPGGGVGPHFDQYDVFLIQGQGRRRWRVGK 156 (383)
T ss_pred ---CcCceEEEehhhhcCHHHHHHHHHhccCccc------cccceEEEEecCCCccCccccchheeEEeecccceeecCC
Confidence 1122223321 11123334555554 6663 3345566678888888999999999999999999999999
Q ss_pred CCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEEEEcCCCEEEeCCCceEEEEecCceEEEEeccCCC
Q 015736 319 ASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDEGEMLYIPPKWWHYVRSLSISFSVSFWWSDG 394 (401)
Q Consensus 319 P~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~pGD~LyIP~gWwH~V~sl~~siSVs~wf~~~ 394 (401)
+......+|+.... .++.. ....+-+|+||||||||+||||+-.++++++..|+=|+.+
T Consensus 157 ~~~~~~~~~~~d~~-----~~~~f------------~~~~d~vlepGDiLYiPp~~~H~gvae~dc~tySvG~r~P 215 (383)
T COG2850 157 KCNMSTLCPHPDLL-----ILAPF------------EPDIDEVLEPGDILYIPPGFPHYGVAEDDCMTYSVGFRAP 215 (383)
T ss_pred cccccCcCCCcchh-----hcCCC------------CchhhhhcCCCceeecCCCCCcCCcccccccceeeeccCC
Confidence 88776666632211 01111 1336789999999999999999999998876666655544
No 7
>PF08007 Cupin_4: Cupin superfamily protein; InterPro: IPR022777 This signature represents primarily the cupin fold found in JmjC transcription factors. The fold is also found in lysine-specific demethylase NO66.; PDB: 2XDV_A 1VRB_B 4DIQ_B.
Probab=99.70 E-value=3.1e-17 Score=162.04 Aligned_cols=97 Identities=26% Similarity=0.492 Sum_probs=65.9
Q ss_pred cccceeeccCC-CCCccccccCCceeEEEeeeeEEEEecCCCC-CccccCcccccCCCCcccCCCcccccCCCCCCCceE
Q 015736 281 RSLNAWFGPAG-TVTPLHHDPHHNILAQVVGKKYIRLYPASLS-EELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFF 358 (401)
Q Consensus 281 ~~~~~W~Gp~g-t~splH~D~~~n~l~qV~G~K~~~L~pP~~~-~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~ 358 (401)
...|++++|+| .+.+.|+|.+++|.+|+.|+|+|+|+++... ...++. .++. ....+ .+..
T Consensus 114 ~~~n~Y~tp~g~~g~~~H~D~~dvfvlQ~~G~K~W~l~~~~~~~~~~~~~----------~~~~-----~~~~~--~~~~ 176 (319)
T PF08007_consen 114 VGANAYLTPPGSQGFGPHYDDHDVFVLQLEGRKRWRLYPPPDEPAPLYSD----------QPFK-----QLEEF--EPVE 176 (319)
T ss_dssp EEEEEEEETSSBEESECEE-SSEEEEEEEES-EEEEEE-SCCCTTTSSCE------------TT-----TCG----STSE
T ss_pred cceEEEecCCCCCCccCEECCcccEEEECCceeEEEECCCCcccccccCC----------CCcc-----ccccC--ceeE
Confidence 35699999998 5569999999999999999999999994432 122211 1111 00111 3567
Q ss_pred EEEEcCCCEEEeCCCceEEEEecCceEEEEeccCCC
Q 015736 359 DCILDEGEMLYIPPKWWHYVRSLSISFSVSFWWSDG 394 (401)
Q Consensus 359 e~iL~pGD~LyIP~gWwH~V~sl~~siSVs~wf~~~ 394 (401)
+++|+|||+||||+||||++.+.+.|+++|+.+..+
T Consensus 177 ~~~L~pGD~LYlPrG~~H~~~~~~~S~hltv~~~~~ 212 (319)
T PF08007_consen 177 EVVLEPGDVLYLPRGWWHQAVTTDPSLHLTVGFRAP 212 (319)
T ss_dssp EEEE-TT-EEEE-TT-EEEEEESS-EEEEEEEECCE
T ss_pred EEEECCCCEEEECCCccCCCCCCCCceEEEEeeeCC
Confidence 999999999999999999999999999999987754
No 8
>PF02373 JmjC: JmjC domain, hydroxylase; InterPro: IPR013129 Jumonji protein is required for neural tube formation in mice [].There is evidence of domain swapping within the jumonji family of transcription factors []. This domain is often associated with jmjN (see IPR003349 from INTERPRO) and belongs to the Cupin superfamily [].; PDB: 2YU2_A 2YU1_A 3AVR_A 3AVS_A 2OX0_B 2OQ6_B 2WWJ_A 2Q8D_A 3PDQ_A 2YBK_A ....
Probab=99.27 E-value=1.8e-12 Score=108.34 Aligned_cols=106 Identities=21% Similarity=0.327 Sum_probs=63.4
Q ss_pred eeeccCCCCCccccccCCc---eeEEEeeeeEEEEecCCCCCccccCcccc-cCCCCcccCCCcccccCCC---CCCCce
Q 015736 285 AWFGPAGTVTPLHHDPHHN---ILAQVVGKKYIRLYPASLSEELYPYSETM-LCNSSQVDLDNIDETKFPK---VRDLEF 357 (401)
Q Consensus 285 ~W~Gp~gt~splH~D~~~n---~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~-~~ntS~vD~~~~d~~~fP~---~~~a~~ 357 (401)
+.+|.++|.|++|.|.... ++...-|.|.|.++||.....+...-... ..+.+.. ....+...-|. -.+.++
T Consensus 2 ~~ig~~~s~t~~H~e~~~~~sv~~~~~g~~k~W~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~l~~~gi~~ 80 (114)
T PF02373_consen 2 LYIGMKGSYTPWHIEDNGLSSVNYHHFGGSKVWYIVPPEDADKFEKFLRSKESQNCPQF-LDHKNIFVSPEQLKKAGIPV 80 (114)
T ss_dssp EEEE-TTEEEEEEE-GGG-EEEEEEEEESEEEEEEE-GGGHHHHHHHHHHHHHHHSTTG-GCTGGEEEGHHHHHHTTS--
T ss_pred EEEeCCCcCCCcEecCCCCceeeeeccCcceEeEEechhhhhhHHHHHhhccccccccc-ccccccccceeeeeccCccc
Confidence 5789999999999998642 23445678999999999865443211100 0000010 11000000011 134688
Q ss_pred EEEEEcCCCEEEeCCCceEEEEecCceEEEEecc
Q 015736 358 FDCILDEGEMLYIPPKWWHYVRSLSISFSVSFWW 391 (401)
Q Consensus 358 ~e~iL~pGD~LyIP~gWwH~V~sl~~siSVs~wf 391 (401)
+.++++|||+++||+||+|+|.|++.|++++.+|
T Consensus 81 ~~~~Q~~Ge~V~i~pg~~H~v~n~g~~i~~a~Nf 114 (114)
T PF02373_consen 81 YRFVQKPGEFVFIPPGAYHQVFNLGDNISEAVNF 114 (114)
T ss_dssp EEEEEETT-EEEE-TT-EEEEEESSSEEEEEEEE
T ss_pred ccceECCCCEEEECCCceEEEEeCCceEEEEecC
Confidence 9999999999999999999999999999998876
No 9
>KOG3706 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.10 E-value=2.1e-10 Score=114.58 Aligned_cols=89 Identities=29% Similarity=0.404 Sum_probs=69.1
Q ss_pred cccccceeeccCCCCC-ccccccCCceeEEEeeeeEEEEecCCCC-CccccCcccccCCCCcccCCCcccccCCCCCCCc
Q 015736 279 ELRSLNAWFGPAGTVT-PLHHDPHHNILAQVVGKKYIRLYPASLS-EELYPYSETMLCNSSQVDLDNIDETKFPKVRDLE 356 (401)
Q Consensus 279 ~~~~~~~W~Gp~gt~s-plH~D~~~n~l~qV~G~K~~~L~pP~~~-~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~ 356 (401)
.+...|+++.|+||.. +.|||--+.|+.||.|||+|+||.|... ..|+-- ...|+++-|+. -+
T Consensus 315 c~vGaNvYLTPagSqGfaPHyDdIeaFvlQvEGrK~Wrly~P~~~~eel~l~---sS~Nf~eedlg------------eP 379 (629)
T KOG3706|consen 315 CLVGANVYLTPAGSQGFAPHYDDIEAFVLQVEGRKHWRLYHPTVPLEELALV---SSDNFTEEDLG------------EP 379 (629)
T ss_pred cccccceeecCCCCCCCCCchhhhhhhhheeccceeeEeecCCCcHhhhhhc---cCCCCChhHhC------------Cc
Confidence 3456799999999874 8999999999999999999999999865 344421 12344443332 25
Q ss_pred eEEEEEcCCCEEEeCCCceEEEEecC
Q 015736 357 FFDCILDEGEMLYIPPKWWHYVRSLS 382 (401)
Q Consensus 357 ~~e~iL~pGD~LyIP~gWwH~V~sl~ 382 (401)
.++.+|+|||+||+|.|.-||.+.-+
T Consensus 380 V~e~vle~GDllYfPRG~IHQA~t~~ 405 (629)
T KOG3706|consen 380 VHEFVLEPGDLLYFPRGTIHQADTPA 405 (629)
T ss_pred hHHhhcCCCcEEEecCcceeeccccc
Confidence 67899999999999999999987654
No 10
>KOG1633 consensus F-box protein JEMMA and related proteins with JmjC, PHD, F-box and LRR domains [Chromatin structure and dynamics]
Probab=98.33 E-value=2.2e-06 Score=92.87 Aligned_cols=203 Identities=19% Similarity=0.239 Sum_probs=121.5
Q ss_pred HHHHhhhcCCCcEEEecCCCCCccCC--CCCcHHHHHHHhC-CceEEEEeCcccccCCceeeecCHHHHHHHHHhCCCCC
Q 015736 169 GFLSEYFLSGSPVIITDCMAHWPART--NWNDLDYLKRVAG-DRTVPVEVGKNYLCQDWKQELIPFSQFLERIQSNGSSA 245 (401)
Q Consensus 169 ~F~~~y~~~~~PvVi~g~~~~WpA~~--~Wt~~~yL~~~~G-~~~V~ve~g~~y~~~~w~~~~mt~~eFl~~~~~~~~~~ 245 (401)
+|.++-. .+.|.+.++-...-.++- ..+ .+--+...| ++.+.|-.-.+- +...|++.+|+++|.....
T Consensus 9 ef~~~~~-~~~p~~~~~~~~lg~~~p~p~f~-v~dv~~~vg~~r~~~v~dv~~q-----~~~km~~~~~~~yy~~~~~-- 79 (776)
T KOG1633|consen 9 EFLQDNG-LRVPILFRNKDGLGMTLPSPDFT-VNDVKELVGSDRMIDVVDVNTQ-----KDCKMTLKEFVKYYSSPQR-- 79 (776)
T ss_pred hhhhhcc-cccchhhccCCCccccCCCCCcc-hhhhHHhhCCCccceeeeeecc-----ccccccHHHHhhhhcCcch--
Confidence 4554433 466777765322222221 343 333334445 565555421111 3467999999999987752
Q ss_pred CCCce-eeccchh-------hhhHhhhccCC-----CCCccccCCccccccceeeccCCCCCccccccC--CceeEEEee
Q 015736 246 SVPTY-LAQHQLF-------DQINELRNDIC-----IPDYCFVGGGELRSLNAWFGPAGTVTPLHHDPH--HNILAQVVG 310 (401)
Q Consensus 246 ~~~~Y-L~q~~l~-------~~~p~L~~Di~-----~P~~~~~~~~~~~~~~~W~Gp~gt~splH~D~~--~n~l~qV~G 310 (401)
. ++| +-..++. -+-|++.+++. +|+-+.. .......+.-++-.++.|.+|.|+. ..|+-.+.|
T Consensus 80 ~-R~yNVisLEfS~Trl~~~V~~P~ivr~ldwV~n~wP~~~~~-~~P~vqkyclmsv~~~Ytdfhidfggtsvwyhil~G 157 (776)
T KOG1633|consen 80 K-RLYNVISLEFSDTRLSNLVESPEIVRKLDWVDNQWPDDLKM-EYPKVQKYCLMSVKDSYTDFHIDFGGTSVWYHILAG 157 (776)
T ss_pred h-hhhheeccccCcchHHhcCCCchhhhhhhchhccCCchhcc-cccccccceeeeccccccccccCCCCcchhhhhhcc
Confidence 2 233 2222211 12355544442 3443321 0111234566899999999999996 468888999
Q ss_pred eeEEEEecCCCCC-ccccCcccccCCCCcccCCCcccccCCCCCCCceEEEEEcCCCEEEeCCCceEEEEecCceEEEEe
Q 015736 311 KKYIRLYPASLSE-ELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDEGEMLYIPPKWWHYVRSLSISFSVSF 389 (401)
Q Consensus 311 ~K~~~L~pP~~~~-~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~pGD~LyIP~gWwH~V~sl~~siSVs~ 389 (401)
.|.++|++|.... .+|-... .+ .+- |...|+.-- -.++.|+|++|+.||||.||-|.|..-.+++++.-
T Consensus 158 ~K~f~lI~pt~~nl~~ye~w~--~s----~~q---~~~ffGd~V-dkC~~~~l~~g~T~~iPsGwIhAV~Tp~d~l~fgG 227 (776)
T KOG1633|consen 158 EKTFYLIPPTCENLELYECWE--SS----TPQ---DEIFFGDCV-DKCYKCILKQGQTLFIPSGWIHAVLTPTDCLVFGG 227 (776)
T ss_pred ccceeeeCCcccchhhhhhhh--hc----ccc---cccccCCcc-ceeEEEEeccCceEecccceeEeeecCcchheecc
Confidence 9999999999874 3554432 11 111 112333221 25799999999999999999999999999888766
Q ss_pred ccC
Q 015736 390 WWS 392 (401)
Q Consensus 390 wf~ 392 (401)
+|-
T Consensus 228 nfl 230 (776)
T KOG1633|consen 228 NFL 230 (776)
T ss_pred chh
Confidence 664
No 11
>KOG2132 consensus Uncharacterized conserved protein, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms]
Probab=98.27 E-value=4.3e-07 Score=87.77 Aligned_cols=113 Identities=20% Similarity=0.212 Sum_probs=86.9
Q ss_pred eeeccCCCCCccccccCCceeEEEeeeeEEEEecCCCCCccccCccccc---CCCCcccCCCcccccCCCCCC--CceEE
Q 015736 285 AWFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYPASLSEELYPYSETML---CNSSQVDLDNIDETKFPKVRD--LEFFD 359 (401)
Q Consensus 285 ~W~Gp~gt~splH~D~~~n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~---~ntS~vD~~~~d~~~fP~~~~--a~~~e 359 (401)
.=++-....+..|.|-.+|++.|+.|.||.++++|++ .+| .....+ -+.-..|+..||+.++|.|.+ +....
T Consensus 178 rTvpvEvg~~y~~~~w~q~l~t~~~g~~R~~~~~p~~--~~Y-lAqh~lfdqi~elk~Di~iPDyc~~~~f~~~~v~~~~ 254 (355)
T KOG2132|consen 178 RTVPVEVGSTYADEDWSQNLMTQIKGIKRCILFEPRE--CLY-LAQHHLFDQIPELKFDISIPDYCSFPNFENEVVDINA 254 (355)
T ss_pred eeeeeecccccchhHHHhhhHHHhhhhhhhhcCCccc--cch-hhhhhhhccchhhhhccCCCceeecCCCCccccceeE
Confidence 3355556668999999999999999999999999993 333 111111 112236888899999999988 78888
Q ss_pred EEEcCCCEEEeCCCceEEEEecCceEEEEeccCCCCCCCCC
Q 015736 360 CILDEGEMLYIPPKWWHYVRSLSISFSVSFWWSDGGSSTAY 400 (401)
Q Consensus 360 ~iL~pGD~LyIP~gWwH~V~sl~~siSVs~wf~~~~~~~~~ 400 (401)
++..+|++++||..|||.+.+.-..--+..-|.+.+++++|
T Consensus 255 w~GpaGtV~pih~dp~hNi~~qv~G~k~i~l~~p~~s~~ly 295 (355)
T KOG2132|consen 255 WIGPAGTVLPIHMDPWHNILSQVFGRKRIRLYPPEDSGALY 295 (355)
T ss_pred EeccCCceeccccccccceeeeeecceEEEEecCcccCCCC
Confidence 99999999999999999999987765555566666666665
No 12
>KOG1356 consensus Putative transcription factor 5qNCA, contains JmjC domain [Transcription]
Probab=97.96 E-value=1.5e-06 Score=92.71 Aligned_cols=224 Identities=21% Similarity=0.238 Sum_probs=120.5
Q ss_pred CHHHHHHhhhcCCCcEEEecCCCCCccCCCCCcHHHHHHHhCCceEEEEeCcccccCCceeeec-CHHHHHHHHHhCCCC
Q 015736 166 SLEGFLSEYFLSGSPVIITDCMAHWPARTNWNDLDYLKRVAGDRTVPVEVGKNYLCQDWKQELI-PFSQFLERIQSNGSS 244 (401)
Q Consensus 166 S~e~F~~~y~~~~~PvVi~g~~~~WpA~~~Wt~~~yL~~~~G~~~V~ve~g~~y~~~~w~~~~m-t~~eFl~~~~~~~~~ 244 (401)
....|. +++..++|||++|+.+.-+. ..|. ++-|...+|+..+-+--+.+-. --...-| .|-+|++.+......
T Consensus 529 n~~~FQ-EhWkqGqPViVs~V~~~l~g-~lW~-P~a~~~~~g~q~~~l~n~~~~~--i~s~d~~~~fwegFe~~~kr~~~ 603 (889)
T KOG1356|consen 529 NLKHFQ-EHWKQGQPVIVSGVHKKLNG-LLWK-PEALSRAFGDQVVDLSNCNNSQ--IISNDCVDNFWEGFEGYSKRLKS 603 (889)
T ss_pred HHHHHH-HHHhcCCcEEehHhhhhccc-cccc-hHHHHHHhccchhhhhcCCCCC--ccccchhhhHHHhhcccccCccc
Confidence 456676 57779999999999877665 3898 7888877887654443222110 0011122 366777665543311
Q ss_pred -C--CCCceeeccc----hhhhhH----hhhccCCCCCccccCCccc-----------c---ccceee--------ccCC
Q 015736 245 -A--SVPTYLAQHQ----LFDQIN----ELRNDICIPDYCFVGGGEL-----------R---SLNAWF--------GPAG 291 (401)
Q Consensus 245 -~--~~~~YL~q~~----l~~~~p----~L~~Di~~P~~~~~~~~~~-----------~---~~~~W~--------Gp~g 291 (401)
. ...+=|.+++ +-+.+| +|..-+.+|.|+... |.+ . ...+|+ |-.-
T Consensus 604 ~~g~p~vLKLKDWpp~~~Fkd~lP~r~eell~sLPlpEYt~r~-G~LNlAs~LP~~fv~PDLGPk~y~AYG~~~e~gr~~ 682 (889)
T KOG1356|consen 604 ENGWPEVLKLKDWPPGEDFKDMLPRRFEELLASLPLPEYTDRD-GKLNLASKLPEGFVRPDLGPKLYNAYGVSTELGRGD 682 (889)
T ss_pred ccCCeeEEeecCCCchHhHhhhhhHHHHHHHHcCCchhhhcCC-CccchHhhCcccccCCCCCchhhhhccccccccCCC
Confidence 1 1224455663 223444 566667888887632 211 1 112232 3345
Q ss_pred CCCccccccCC--ceeEEEe------------------e------e-----------eEEEEecCCCCCcccc----Ccc
Q 015736 292 TVTPLHHDPHH--NILAQVV------------------G------K-----------KYIRLYPASLSEELYP----YSE 330 (401)
Q Consensus 292 t~splH~D~~~--n~l~qV~------------------G------~-----------K~~~L~pP~~~~~Lyp----~~~ 330 (401)
++|-||.|..+ |+++-|- | + -.|-+|.-.+.+.|.- +..
T Consensus 683 gtTnLH~dvSDaVNILvyv~e~~~~~~~~~~~~k~~~~~~~de~~~~~~~~~~e~~GALWhIF~~~Dv~KireyL~k~~~ 762 (889)
T KOG1356|consen 683 GTTNLHLDVSDAVNILVYVGEPPGQIEQIAKVLKKIQEGDLDEITRSRISSVSETPGALWHIFRAQDVPKIREYLRKVCK 762 (889)
T ss_pred CceeeceehhhhhhheeeeccCCchHHhHHHHHHhhhhcchhhhhhhhccccccCCcchhhhhhhcchHHHHHHHHHhhH
Confidence 67899999987 4443221 0 0 0111111111111000 000
Q ss_pred cc-cCCCCcccCC---CcccccC------CCCCCCceEEEEEcCCCEEEeCCCceEEEEecCceEEEEeccCCCCC
Q 015736 331 TM-LCNSSQVDLD---NIDETKF------PKVRDLEFFDCILDEGEMLYIPPKWWHYVRSLSISFSVSFWWSDGGS 396 (401)
Q Consensus 331 ~~-~~ntS~vD~~---~~d~~~f------P~~~~a~~~e~iL~pGD~LyIP~gWwH~V~sl~~siSVs~wf~~~~~ 396 (401)
+. ..++-..|+- ++=++++ -++ +++++..++..||++|||+|-.|||+||-.+|.|+.-|..++.
T Consensus 763 E~~~~~~~v~hPIhDQS~YLd~~lr~RLkeEy-GVe~WtfvQ~LGdAVfIPAGaPHQVrNLkSCikVa~DFVSPE~ 837 (889)
T KOG1356|consen 763 EQGHEVPKVHHPIHDQSWYLDRYLRRRLKEEY-GVEPWTFVQFLGDAVFIPAGAPHQVRNLKSCIKVAEDFVSPEH 837 (889)
T ss_pred HhcCCCCcccCCCcccceeccHHHHHHHHHHh-CCCccchhhcccceEEecCCCcHHhhhhhhHHHHHHhhCChhh
Confidence 00 0111111110 1101111 011 3678999999999999999999999999999999998887764
No 13
>COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes [Carbohydrate transport and metabolism / General function prediction only]
Probab=97.53 E-value=0.00042 Score=63.81 Aligned_cols=62 Identities=21% Similarity=0.374 Sum_probs=51.5
Q ss_pred cCCCCCccccccC-Cc--eeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEEEEcCC
Q 015736 289 PAGTVTPLHHDPH-HN--ILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDEG 365 (401)
Q Consensus 289 p~gt~splH~D~~-~n--~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~pG 365 (401)
++|+...+|+.|+ +- |+-.|.|+=+.+|+.|.- ...+..+++|
T Consensus 88 t~G~~~~~H~Hp~ade~E~y~vi~G~g~m~v~~~~G----------------------------------~~~v~~~~~G 133 (209)
T COG2140 88 TPGAMRELHYHPNADEPEIYYVLKGEGRMLVQKPEG----------------------------------EARVIAVRAG 133 (209)
T ss_pred cCCcccccccCCCCCcccEEEEEeccEEEEEEcCCC----------------------------------cEEEEEecCC
Confidence 4567777899997 34 899999999999987751 1357889999
Q ss_pred CEEEeCCCceEEEEecCce
Q 015736 366 EMLYIPPKWWHYVRSLSIS 384 (401)
Q Consensus 366 D~LyIP~gWwH~V~sl~~s 384 (401)
|++|||++|-|+++|.++.
T Consensus 134 d~iyVPp~~gH~t~N~Gd~ 152 (209)
T COG2140 134 DVIYVPPGYGHYTINTGDE 152 (209)
T ss_pred cEEEeCCCcceEeecCCCC
Confidence 9999999999999999863
No 14
>PF00190 Cupin_1: Cupin; InterPro: IPR006045 This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins, and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant. ; GO: 0045735 nutrient reservoir activity; PDB: 2E9Q_A 2EVX_A 1OD5_A 1UCX_A 1UD1_C 1FXZ_C 3KGL_C 3KSC_D 1UIJ_F 1IPK_B ....
Probab=97.07 E-value=0.002 Score=56.27 Aligned_cols=78 Identities=12% Similarity=0.222 Sum_probs=54.4
Q ss_pred cCCCCCccccccCCceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEE--EEcCCC
Q 015736 289 PAGTVTPLHHDPHHNILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDC--ILDEGE 366 (401)
Q Consensus 289 p~gt~splH~D~~~n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~--iL~pGD 366 (401)
.+|+....|+...+-++..++|+=++.++.|.... .+.....- .+++||
T Consensus 42 ~pg~~~~Ph~h~a~~i~~V~~G~~~~~~v~~~~~~-----------------------------~~~~~~~~~v~l~~Gd 92 (144)
T PF00190_consen 42 EPGGLRAPHYHNADEIVYVIEGRGRVGVVGPGGPQ-----------------------------EEFRDFSQKVRLKAGD 92 (144)
T ss_dssp ETTEEEEEEEESSEEEEEEEESEEEEEEEETTCSS-----------------------------SEEEEEEEEEEEETTE
T ss_pred hcCCccceeEeeeeEEeeeeccceEEEEEecCCcc-----------------------------ccceeeeceeeeeccc
Confidence 46677788887445688899999888888776421 00112223 599999
Q ss_pred EEEeCCCceEEEEec--CceEEEEeccCCCC
Q 015736 367 MLYIPPKWWHYVRSL--SISFSVSFWWSDGG 395 (401)
Q Consensus 367 ~LyIP~gWwH~V~sl--~~siSVs~wf~~~~ 395 (401)
+++||+||.|++.|. ++.+.+.....+.+
T Consensus 93 v~~vP~G~~h~~~n~~~~~~~~~~~f~~~~~ 123 (144)
T PF00190_consen 93 VFVVPAGHPHWIINDGDDEALVLIIFDTNNP 123 (144)
T ss_dssp EEEE-TT-EEEEEECSSSSEEEEEEEEESST
T ss_pred ceeeccceeEEEEcCCCCCCEEEEEEECCCC
Confidence 999999999999999 46777766655544
No 15
>PF07883 Cupin_2: Cupin domain; InterPro: IPR013096 This family represents the conserved barrel domain of the cupin superfamily [] (cupa is the Latin term for a small barrel). ; PDB: 2OPK_C 3BU7_B 2PHD_D 3NVC_A 3NKT_A 3NJZ_A 3NW4_A 3NST_A 3NL1_A 2H0V_A ....
Probab=96.41 E-value=0.0085 Score=44.99 Aligned_cols=57 Identities=26% Similarity=0.408 Sum_probs=45.8
Q ss_pred cCCCCCccccccCC-ceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEEEEcCCCE
Q 015736 289 PAGTVTPLHHDPHH-NILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDEGEM 367 (401)
Q Consensus 289 p~gt~splH~D~~~-n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~pGD~ 367 (401)
++|...+.|.++.. -++..+.|+-.+.+ . --...|++||+
T Consensus 6 ~pG~~~~~h~H~~~~e~~~vl~G~~~~~~-~--------------------------------------~~~~~l~~Gd~ 46 (71)
T PF07883_consen 6 PPGGSIPPHRHPGEDEFFYVLSGEGTLTV-D--------------------------------------GERVELKPGDA 46 (71)
T ss_dssp ETTEEEEEEEESSEEEEEEEEESEEEEEE-T--------------------------------------TEEEEEETTEE
T ss_pred CCCCCCCCEECCCCCEEEEEEECCEEEEE-c--------------------------------------cEEeEccCCEE
Confidence 45557789998876 78899999877763 1 01578999999
Q ss_pred EEeCCCceEEEEecCce
Q 015736 368 LYIPPKWWHYVRSLSIS 384 (401)
Q Consensus 368 LyIP~gWwH~V~sl~~s 384 (401)
++||++=+|.++|.++.
T Consensus 47 ~~i~~~~~H~~~n~~~~ 63 (71)
T PF07883_consen 47 IYIPPGVPHQVRNPGDE 63 (71)
T ss_dssp EEEETTSEEEEEEESSS
T ss_pred EEECCCCeEEEEECCCC
Confidence 99999999999999864
No 16
>PRK04190 glucose-6-phosphate isomerase; Provisional
Probab=96.35 E-value=0.024 Score=52.11 Aligned_cols=65 Identities=20% Similarity=0.237 Sum_probs=45.2
Q ss_pred CccccccCC---ceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEEEEcCCCEEEe
Q 015736 294 TPLHHDPHH---NILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDEGEMLYI 370 (401)
Q Consensus 294 splH~D~~~---n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~pGD~LyI 370 (401)
|+.|+.+.. =++..+.|+-.+.|-.++ .......++|||++||
T Consensus 87 t~gH~H~~~~~~EiyyvlsG~g~~~l~~~~----------------------------------G~~~~~~v~pGd~v~I 132 (191)
T PRK04190 87 TKGHFHAKADRAEIYYGLKGKGLMLLQDPE----------------------------------GEARWIEMEPGTVVYV 132 (191)
T ss_pred CCCeEcCCCCCCEEEEEEeCEEEEEEecCC----------------------------------CcEEEEEECCCCEEEE
Confidence 777765432 477788898777763211 0245688999999999
Q ss_pred CCCceEEEEecCc--eEEEEeccC
Q 015736 371 PPKWWHYVRSLSI--SFSVSFWWS 392 (401)
Q Consensus 371 P~gWwH~V~sl~~--siSVs~wf~ 392 (401)
|+||-|.++|.++ -.-++.|+.
T Consensus 133 Ppg~~H~~iN~G~epl~fl~v~p~ 156 (191)
T PRK04190 133 PPYWAHRSVNTGDEPLVFLACYPA 156 (191)
T ss_pred CCCCcEEeEECCCCCEEEEEEEcC
Confidence 9999999999875 333444443
No 17
>TIGR03037 anthran_nbaC 3-hydroxyanthranilate 3,4-dioxygenase. Members of this protein family, from both bacteria and eukaryotes, are the enzyme 3-hydroxyanthranilate 3,4-dioxygenase. This enzyme acts on the tryptophan metabolite 3-hydroxyanthranilate and produces 2-amino-3-carboxymuconate semialdehyde, which can rearrange spontaneously to quinolinic acid and feed into nicotinamide biosynthesis, or undergo further enzymatic degradation.
Probab=96.27 E-value=0.021 Score=50.69 Aligned_cols=69 Identities=22% Similarity=0.377 Sum_probs=56.2
Q ss_pred eeccCCCCCccccccCCceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEEEEcCC
Q 015736 286 WFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDEG 365 (401)
Q Consensus 286 W~Gp~gt~splH~D~~~n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~pG 365 (401)
-+|++|..+.+|.++.+-|+.|+.|.=.+.+.... ...++.|++|
T Consensus 33 ~vgGpn~R~d~H~~~tdE~FyqleG~~~l~v~d~g-----------------------------------~~~~v~L~eG 77 (159)
T TIGR03037 33 VVGGPNARTDFHDDPGEEFFYQLKGEMYLKVTEEG-----------------------------------KREDVPIREG 77 (159)
T ss_pred EeCCCCCCcccccCCCceEEEEEcceEEEEEEcCC-----------------------------------cEEEEEECCC
Confidence 36889999999998889999999998766543211 2346899999
Q ss_pred CEEEeCCCceEEEEecCceEEEEe
Q 015736 366 EMLYIPPKWWHYVRSLSISFSVSF 389 (401)
Q Consensus 366 D~LyIP~gWwH~V~sl~~siSVs~ 389 (401)
|+++||+|--|.....+.|+.+.+
T Consensus 78 d~flvP~gvpHsP~r~~~t~~LvI 101 (159)
T TIGR03037 78 DIFLLPPHVPHSPQRPAGSIGLVI 101 (159)
T ss_pred CEEEeCCCCCcccccCCCcEEEEE
Confidence 999999999999998888777654
No 18
>PF06560 GPI: Glucose-6-phosphate isomerase (GPI); InterPro: IPR010551 This entry consists of several bacterial and archaeal glucose-6-phosphate isomerase (GPI) proteins (5.3.1.9 from EC), which are involved in glycolysis and in gluconeogenesis and catalyse the conversion of D-glucose 6-phosphate to D-fructose 6-phosphate. The deduced amino acid sequence of the first archaeal PGI isolated from Pyrococcus furiosus revealed that it is not related to its eukaryotic and many of its bacterial counterparts. In contrast, this archaeal PGI shares similarity with the cupin superfamily that consists of a variety of proteins that are generally involved in sugar metabolism in both prokaryotes and eukaryotes [].; GO: 0004347 glucose-6-phosphate isomerase activity, 0006094 gluconeogenesis, 0006096 glycolysis, 0005737 cytoplasm; PDB: 1J3Q_B 1J3R_B 1J3P_A 2GC0_A 1X8E_A 1X82_A 1QY4_B 2GC2_B 1QXJ_A 1QXR_B ....
Probab=96.27 E-value=0.006 Score=55.50 Aligned_cols=67 Identities=18% Similarity=0.313 Sum_probs=40.0
Q ss_pred ceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEEEEcCCCEEEeCCCceEEEEecC
Q 015736 303 NILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDEGEMLYIPPKWWHYVRSLS 382 (401)
Q Consensus 303 n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~pGD~LyIP~gWwH~V~sl~ 382 (401)
=++..+.|+=.+.|-.++.. + -..++-+..+|||++|||++|-|.+.|.+
T Consensus 85 EvY~vl~G~g~~lLq~~~~~-----------------~-------------~~~~~~v~~~~G~~v~IPp~yaH~tIN~g 134 (182)
T PF06560_consen 85 EVYEVLSGEGLILLQKEEGD-----------------D-------------VGDVIAVEAKPGDVVYIPPGYAHRTINTG 134 (182)
T ss_dssp EEEEEEESSEEEEEE-TTS-----------------------------------EEEEEE-TTEEEEE-TT-EEEEEE-S
T ss_pred cEEEEEeCEEEEEEEecCCC-----------------c-------------ceeEEEEEeCCCCEEEECCCceEEEEECC
Confidence 36778888888887654420 0 01456788999999999999999999998
Q ss_pred ce-EEEEeccCCCCCCCCC
Q 015736 383 IS-FSVSFWWSDGGSSTAY 400 (401)
Q Consensus 383 ~s-iSVs~wf~~~~~~~~~ 400 (401)
+. +.+..|| +...++.|
T Consensus 135 ~~~L~~~~~~-~~~~g~dY 152 (182)
T PF06560_consen 135 DEPLVFAAWV-PRDAGHDY 152 (182)
T ss_dssp SS-EEEEEEE-ETT---BC
T ss_pred CCcEEEEEEE-ecCCCCCc
Confidence 74 5555554 44444443
No 19
>PRK13264 3-hydroxyanthranilate 3,4-dioxygenase; Provisional
Probab=95.94 E-value=0.034 Score=50.25 Aligned_cols=68 Identities=25% Similarity=0.391 Sum_probs=56.3
Q ss_pred eccCCCCCccccccCCceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEEEEcCCC
Q 015736 287 FGPAGTVTPLHHDPHHNILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDEGE 366 (401)
Q Consensus 287 ~Gp~gt~splH~D~~~n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~pGD 366 (401)
+|.+|..+.+|+++.+-|+-|+.|.=++.+.... +..++.|++||
T Consensus 40 vgGpn~r~d~H~~~tdE~FyqleG~~~l~v~d~g-----------------------------------~~~~v~L~eGd 84 (177)
T PRK13264 40 VGGPNARTDFHYDPGEEFFYQLEGDMYLKVQEDG-----------------------------------KRRDVPIREGE 84 (177)
T ss_pred EccCCcccccccCCCceEEEEECCeEEEEEEcCC-----------------------------------ceeeEEECCCC
Confidence 6888988999999999999999998776664311 22468899999
Q ss_pred EEEeCCCceEEEEecCceEEEEe
Q 015736 367 MLYIPPKWWHYVRSLSISFSVSF 389 (401)
Q Consensus 367 ~LyIP~gWwH~V~sl~~siSVs~ 389 (401)
+++||+|--|..+....|+.+.+
T Consensus 85 ~fllP~gvpHsP~r~~~tv~Lvi 107 (177)
T PRK13264 85 MFLLPPHVPHSPQREAGSIGLVI 107 (177)
T ss_pred EEEeCCCCCcCCccCCCeEEEEE
Confidence 99999999999998887877764
No 20
>smart00558 JmjC A domain family that is part of the cupin metalloenzyme superfamily. Probable enzymes, but of unknown functions, that regulate chromatin reorganisation processes (Clissold and Ponting, in press).
Probab=95.88 E-value=0.0054 Score=44.74 Aligned_cols=28 Identities=43% Similarity=0.557 Sum_probs=24.3
Q ss_pred cceeeccCCCCCccccccCC--ceeEEEee
Q 015736 283 LNAWFGPAGTVTPLHHDPHH--NILAQVVG 310 (401)
Q Consensus 283 ~~~W~Gp~gt~splH~D~~~--n~l~qV~G 310 (401)
.++|+|+.+|.|++|+|+++ |++.|+.|
T Consensus 28 ~~~~~G~~~s~t~~H~d~~~~~n~~~~~~~ 57 (57)
T smart00558 28 PYLYMGMAGSVTPWHIDDYDLVNYLHQGAG 57 (57)
T ss_pred ceEEEeCCCCccceeEcCCCeEEEEEecCC
Confidence 67999999999999999999 87776654
No 21
>TIGR03404 bicupin_oxalic bicupin, oxalate decarboxylase family. Members of this protein family are defined as bicupins as they have two copies of the cupin domain (pfam00190). Two different known activities for members of this family are oxalate decarboxylase (EC 4.1.1.2) and oxalate oxidase (EC 1.2.3.4), although the latter activity has more often been found in distantly related monocupin (germin) proteins.
Probab=95.59 E-value=0.079 Score=53.65 Aligned_cols=61 Identities=20% Similarity=0.330 Sum_probs=47.0
Q ss_pred cCCCCCccccccC-CceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEEEEcCCCE
Q 015736 289 PAGTVTPLHHDPH-HNILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDEGEM 367 (401)
Q Consensus 289 p~gt~splH~D~~-~n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~pGD~ 367 (401)
.+|..+++|+.+. +-|+..+.|+=++.++.++. ...+..+++||+
T Consensus 253 ~PG~~~~~H~H~~~~E~~yvl~G~~~~~v~d~~g----------------------------------~~~~~~l~~GD~ 298 (367)
T TIGR03404 253 EPGAMRELHWHPNADEWQYFIQGQARMTVFAAGG----------------------------------NARTFDYQAGDV 298 (367)
T ss_pred CCCCccCCeeCcCCCeEEEEEEEEEEEEEEecCC----------------------------------cEEEEEECCCCE
Confidence 3566678898775 45888889988888765541 113466999999
Q ss_pred EEeCCCceEEEEecCc
Q 015736 368 LYIPPKWWHYVRSLSI 383 (401)
Q Consensus 368 LyIP~gWwH~V~sl~~ 383 (401)
+|||.|..|+++|.++
T Consensus 299 ~~iP~g~~H~i~N~G~ 314 (367)
T TIGR03404 299 GYVPRNMGHYVENTGD 314 (367)
T ss_pred EEECCCCeEEEEECCC
Confidence 9999999999999863
No 22
>smart00835 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins, and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.
Probab=95.16 E-value=0.18 Score=44.04 Aligned_cols=62 Identities=21% Similarity=0.338 Sum_probs=44.9
Q ss_pred cCCCCCcccccc-CCceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEEEEcCCCE
Q 015736 289 PAGTVTPLHHDP-HHNILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDEGEM 367 (401)
Q Consensus 289 p~gt~splH~D~-~~n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~pGD~ 367 (401)
++|+.++.|+.+ ..-++..+.|+=.+.+--+.. -...+..+++||+
T Consensus 38 ~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~~~~~~---------------------------------~~~~~~~l~~GD~ 84 (146)
T smart00835 38 EPGGMLPPHYHPRATELLYVVRGEGRVGVVDPNG---------------------------------NKVYDARLREGDV 84 (146)
T ss_pred cCCcCcCCeeCCCCCEEEEEEeCeEEEEEEeCCC---------------------------------CeEEEEEecCCCE
Confidence 345567788765 345777889986666533211 0235788999999
Q ss_pred EEeCCCceEEEEecCc
Q 015736 368 LYIPPKWWHYVRSLSI 383 (401)
Q Consensus 368 LyIP~gWwH~V~sl~~ 383 (401)
++||++.+|...|.++
T Consensus 85 ~~ip~g~~H~~~n~~~ 100 (146)
T smart00835 85 FVVPQGHPHFQVNSGD 100 (146)
T ss_pred EEECCCCEEEEEcCCC
Confidence 9999999999999875
No 23
>TIGR03404 bicupin_oxalic bicupin, oxalate decarboxylase family. Members of this protein family are defined as bicupins as they have two copies of the cupin domain (pfam00190). Two different known activities for members of this family are oxalate decarboxylase (EC 4.1.1.2) and oxalate oxidase (EC 1.2.3.4), although the latter activity has more often been found in distantly related monocupin (germin) proteins.
Probab=94.67 E-value=0.24 Score=50.19 Aligned_cols=66 Identities=18% Similarity=0.250 Sum_probs=48.3
Q ss_pred eeeccCCCCCccccccCCceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEEEEcC
Q 015736 285 AWFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDE 364 (401)
Q Consensus 285 ~W~Gp~gt~splH~D~~~n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~p 364 (401)
+-+.+ |...++|......++.++.|+=++.+..... +.+...|++
T Consensus 72 ~~l~p-G~~~~~HwH~~~E~~yVl~G~~~v~~~d~~g----------------------------------~~~~~~L~~ 116 (367)
T TIGR03404 72 MRLEP-GAIRELHWHKEAEWAYVLYGSCRITAVDENG----------------------------------RNYIDDVGA 116 (367)
T ss_pred EEEcC-CCCCCcccCCCceEEEEEeeEEEEEEEcCCC----------------------------------cEEEeEECC
Confidence 34554 4455788776667999999998888754320 123347999
Q ss_pred CCEEEeCCCceEEEEecCceE
Q 015736 365 GEMLYIPPKWWHYVRSLSISF 385 (401)
Q Consensus 365 GD~LyIP~gWwH~V~sl~~si 385 (401)
||++|||+|..|..++.+...
T Consensus 117 GD~~~fP~g~~H~~~n~~~~~ 137 (367)
T TIGR03404 117 GDLWYFPPGIPHSLQGLDEGC 137 (367)
T ss_pred CCEEEECCCCeEEEEECCCCe
Confidence 999999999999999986543
No 24
>COG1898 RfbC dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes [Cell envelope biogenesis, outer membrane]
Probab=94.27 E-value=0.35 Score=43.74 Aligned_cols=90 Identities=21% Similarity=0.264 Sum_probs=65.5
Q ss_pred cccceeeccCCCCCccccccCC-c-eeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceE
Q 015736 281 RSLNAWFGPAGTVTPLHHDPHH-N-ILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFF 358 (401)
Q Consensus 281 ~~~~~W~Gp~gt~splH~D~~~-n-~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~ 358 (401)
...|.-++.+|+.=.+|+.... + +++.|.|+=...++.-.... |.|. ...
T Consensus 45 ~Q~n~S~S~~GvlRGlHyq~~~q~klv~~v~G~v~dv~vDlR~~S--------------------------pTyg--~~~ 96 (173)
T COG1898 45 VQDNHSFSYPGVLRGLHYQHKPQGKLVRVVSGKVFDVAVDLRKDS--------------------------PTYG--KWV 96 (173)
T ss_pred ccceEEEecCCeeEEEEcccCCCCeEEEEecCeEEEEEEEccCCC--------------------------CCcc--eEE
Confidence 3457777779999999998866 4 67778898777776554321 2222 334
Q ss_pred EEEEcCC--CEEEeCCCceEEEEecCceEEEEeccCCCCCCC
Q 015736 359 DCILDEG--EMLYIPPKWWHYVRSLSISFSVSFWWSDGGSST 398 (401)
Q Consensus 359 e~iL~pG--D~LyIP~gWwH~V~sl~~siSVs~wf~~~~~~~ 398 (401)
.++|.+- .+|+||+|+.|...+|+++..|.++-...-.|+
T Consensus 97 ~~~ls~~N~~~l~IP~G~AHGf~~L~d~~~~~y~~~~~Y~p~ 138 (173)
T COG1898 97 GVVLSAENKRQLYIPPGFAHGFQVLSDDAEVVYKVTEEYDPE 138 (173)
T ss_pred EEEecCCCceEEEeCCcccceeEEccCceEEEEEecceeCcc
Confidence 5666665 899999999999999999888888766655554
No 25
>PF06052 3-HAO: 3-hydroxyanthranilic acid dioxygenase; InterPro: IPR010329 Members of this protein family, from both bacteria and eukaryotes, are the enzyme 3-hydroxyanthranilate 3,4-dioxygenase (1.13.11.6 from EC). It is part of the kynurenine pathway for the degradation of tryptophan and the biosynthesis of nicotinic acid [].The prokaryotic homologue is involved in the 2-nitrobenzoate degradation pathway []. The enzyme acts on the tryptophan metabolite 3-hydroxyanthranilate and produces 2-amino-3-carboxymuconate semialdehyde, which can rearrange spontaneously to quinolinic acid and feed into nicotinamide biosynthesis, or undergo further enzymatic degradation.; GO: 0000334 3-hydroxyanthranilate 3,4-dioxygenase activity, 0005506 iron ion binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 1ZVF_A 1YFX_A 1YFW_A 1YFY_A 1YFU_A 2QNK_A 3FE5_A.
Probab=94.03 E-value=0.31 Score=42.73 Aligned_cols=69 Identities=19% Similarity=0.282 Sum_probs=46.9
Q ss_pred eeeccCCCCCccccccCCceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEEEEcC
Q 015736 285 AWFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDE 364 (401)
Q Consensus 285 ~W~Gp~gt~splH~D~~~n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~p 364 (401)
..+|+++..+..|.|+..-|+-|+.|.-...+.... ..-++.+++
T Consensus 37 mvVGGPN~R~DyHine~eE~FyQ~kG~m~Lkv~e~g-----------------------------------~~kdi~I~E 81 (151)
T PF06052_consen 37 MVVGGPNQRTDYHINETEEFFYQLKGDMCLKVVEDG-----------------------------------KFKDIPIRE 81 (151)
T ss_dssp EEEESSB--SSEEE-SS-EEEEEEES-EEEEEEETT-----------------------------------EEEEEEE-T
T ss_pred EEEcCCCCCCccccCCcceEEEEEeCcEEEEEEeCC-----------------------------------ceEEEEeCC
Confidence 346999999999999999999999998777664432 234789999
Q ss_pred CCEEEeCCCceEEEEecCceEEEE
Q 015736 365 GEMLYIPPKWWHYVRSLSISFSVS 388 (401)
Q Consensus 365 GD~LyIP~gWwH~V~sl~~siSVs 388 (401)
||+.++|++--|.-+-.++||.+=
T Consensus 82 Ge~fLLP~~vpHsP~R~~~tiGLV 105 (151)
T PF06052_consen 82 GEMFLLPANVPHSPQRPADTIGLV 105 (151)
T ss_dssp TEEEEE-TT--EEEEE-TT-EEEE
T ss_pred CcEEecCCCCCCCCcCCCCcEEEE
Confidence 999999999999988777777653
No 26
>PF02041 Auxin_BP: Auxin binding protein; InterPro: IPR000526 Auxin binding protein is located in the lumen of the endoplasmic reticulum (ER). The primary structure contains an N-terminal hydrophobic leader sequence of 30-40 amino acids, which could represent a signal for translocation of the protein to the ER [, ]. The mature protein comprises around 165 residues, and contains a number of potential N-glycosylation sites. In vitro transport studies have demonstrated co-translational glycosylation []. Retention within the lumen of the ER correlates with an additional signal located at the C terminus, represented by the sequence Lys-Asp-Glu-Leu, known to be responsible for preventing secretion of proteins from the lumen of the ER in eukaryotic cells [, ].; GO: 0004872 receptor activity, 0005788 endoplasmic reticulum lumen; PDB: 1LR5_D 1LRH_D.
Probab=93.39 E-value=0.33 Score=42.49 Aligned_cols=73 Identities=18% Similarity=0.351 Sum_probs=43.5
Q ss_pred ccccceeec--cCCCCCccccccCCceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCce
Q 015736 280 LRSLNAWFG--PAGTVTPLHHDPHHNILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEF 357 (401)
Q Consensus 280 ~~~~~~W~G--p~gt~splH~D~~~n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~ 357 (401)
+..+.+|+- .+|+.||.|...++-.++++.|+=+..|..... +||. .+
T Consensus 41 mkevEVwlQTfAPG~~TPiHRHsCEEVFvVLkG~GTl~l~~~~~--------------------------~~pG----~p 90 (167)
T PF02041_consen 41 MKEVEVWLQTFAPGSATPIHRHSCEEVFVVLKGSGTLYLASSHE--------------------------KYPG----KP 90 (167)
T ss_dssp -SSEEEEEEEE-TT-B--EEEESS-EEEEEEE--EEEEE--SSS--------------------------SS------S-
T ss_pred ceeeeEEeeeecCCCCCCCccccccEEEEEEecceEEEEecccc--------------------------cCCC----Cc
Confidence 345678873 579999999999999999999998888863321 2222 45
Q ss_pred EEEEEcCCCEEEeCCCceEEEEecC
Q 015736 358 FDCILDEGEMLYIPPKWWHYVRSLS 382 (401)
Q Consensus 358 ~e~iL~pGD~LyIP~gWwH~V~sl~ 382 (401)
.+....|++.++||++--|||.|-+
T Consensus 91 qef~~~pnSTf~IPvn~~HQv~NT~ 115 (167)
T PF02041_consen 91 QEFPIFPNSTFHIPVNDAHQVWNTN 115 (167)
T ss_dssp EEEEE-TTEEEEE-TT--EEEE---
T ss_pred eEEEecCCCeEEeCCCCcceeecCC
Confidence 7888999999999999999999986
No 27
>COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]
Probab=93.30 E-value=0.45 Score=40.48 Aligned_cols=69 Identities=19% Similarity=0.250 Sum_probs=52.4
Q ss_pred cceeeccCCCCCcccccc-CCceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEEE
Q 015736 283 LNAWFGPAGTVTPLHHDP-HHNILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCI 361 (401)
Q Consensus 283 ~~~W~Gp~gt~splH~D~-~~n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~i 361 (401)
...+...+|..++.|+.| ..-.+..+.|+=++.+= --.-+
T Consensus 45 ~~~v~~~~G~~~~~H~hp~~~~~~~Vl~G~~~~~~~---------------------------------------g~~~~ 85 (131)
T COG1917 45 VVLVTFEPGAVIPWHTHPLGEQTIYVLEGEGTVQLE---------------------------------------GEKKE 85 (131)
T ss_pred EEEEEECCCcccccccCCCcceEEEEEecEEEEEec---------------------------------------CCceE
Confidence 345667889999999998 55677788887655541 01367
Q ss_pred EcCCCEEEeCCCceEEEEecCce--EEEEec
Q 015736 362 LDEGEMLYIPPKWWHYVRSLSIS--FSVSFW 390 (401)
Q Consensus 362 L~pGD~LyIP~gWwH~V~sl~~s--iSVs~w 390 (401)
+++||+++||+|=.|.+.+.+++ +-+...
T Consensus 86 l~~Gd~i~ip~g~~H~~~a~~~~~~~~l~v~ 116 (131)
T COG1917 86 LKAGDVIIIPPGVVHGLKAVEDEPMVLLLVF 116 (131)
T ss_pred ecCCCEEEECCCCeeeeccCCCCceeEEEEe
Confidence 99999999999999999999876 444443
No 28
>TIGR01221 rmlC dTDP-4-dehydrorhamnose 3,5-epimerase. This enzyme participates in the biosynthesis of dTDP-L-rhamnose, often as a precursor to LPS O-antigen
Probab=93.13 E-value=0.76 Score=41.71 Aligned_cols=81 Identities=17% Similarity=0.181 Sum_probs=57.4
Q ss_pred ccceeeccCCCCCcccccc---CCceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceE
Q 015736 282 SLNAWFGPAGTVTPLHHDP---HHNILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFF 358 (401)
Q Consensus 282 ~~~~W~Gp~gt~splH~D~---~~n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~ 358 (401)
..|.=+..+|++-.+|+.. ..=+...+.|+=.-+++..... | |.|. +..
T Consensus 45 Q~n~S~S~~gvlRGlH~q~~~~q~Klv~c~~G~i~dV~VDlR~~--------------S------------pTfG--~~~ 96 (176)
T TIGR01221 45 QDNHSKSYKGVLRGLHYQRPHPQGKLVRVLRGEVFDVAVDLRRN--------------S------------PTFG--KWV 96 (176)
T ss_pred eeEEEEecCCEEEEEEECCCCCCceEEEEccCCEEEEEEECCCC--------------c------------CCCC--eEE
Confidence 3456666778888999873 3457888899888787766532 1 2232 345
Q ss_pred EEEEcC--CCEEEeCCCceEEEEecCceEEEEec
Q 015736 359 DCILDE--GEMLYIPPKWWHYVRSLSISFSVSFW 390 (401)
Q Consensus 359 e~iL~p--GD~LyIP~gWwH~V~sl~~siSVs~w 390 (401)
.++|.+ +-+||||+|.+|...+|++...|.+-
T Consensus 97 ~~~L~~~~~~~l~IP~G~aHGF~~L~d~a~v~Y~ 130 (176)
T TIGR01221 97 GVLLSAENKRQLWIPEGFAHGFVVLSDEAEFLYK 130 (176)
T ss_pred EEEECCCCCCEEEeCCcceeEEEEcCCCeEEEEe
Confidence 667777 66999999999999999886555443
No 29
>PF05523 FdtA: WxcM-like, C-terminal ; InterPro: IPR008894 This entry includes FdtA (Q6T1W8 from SWISSPROT) from Aneurinibacillus thermoaerophilus, which has been characterised as a dTDP-6-deoxy-3,4-keto-hexulose isomerase []. It also includes WxcM (Q93S92 from SWISSPROT) from Xanthomonas campestris pv campestris) []. ; PDB: 2PAK_A 2PAE_A 2PA7_B 2PAM_A.
Probab=92.30 E-value=0.53 Score=40.54 Aligned_cols=71 Identities=27% Similarity=0.370 Sum_probs=36.6
Q ss_pred ccCCCCCccccccC-CceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEEEEcCC-
Q 015736 288 GPAGTVTPLHHDPH-HNILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDEG- 365 (401)
Q Consensus 288 Gp~gt~splH~D~~-~n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~pG- 365 (401)
-+.|..-.+|.... .-+++.+.|+=.+.+..... ..+.+|...
T Consensus 40 ~~~~~~RG~H~Hk~~~~~~~~l~Gs~~v~~~d~~~-----------------------------------~~~~~L~~~~ 84 (131)
T PF05523_consen 40 VPPGVIRGWHAHKKTTQWFIVLSGSFKVVLDDGRE-----------------------------------EEEFILDEPN 84 (131)
T ss_dssp --SS--EEEEEESS--EEEEEEES-EEEEEE-SS------------------------------------EEEEEE--TT
T ss_pred CCCCCcccccccccccEEEEEEeCEEEEEEecCCC-----------------------------------cEEEEECCCC
Confidence 34454456666544 35788899998887533221 135566655
Q ss_pred CEEEeCCCceEEEEecCceEEEEeccCCC
Q 015736 366 EMLYIPPKWWHYVRSLSISFSVSFWWSDG 394 (401)
Q Consensus 366 D~LyIP~gWwH~V~sl~~siSVs~wf~~~ 394 (401)
..|+||+|+||...++++. ||=+-|.+.
T Consensus 85 ~~L~Ippg~w~~~~~~s~~-svlLv~as~ 112 (131)
T PF05523_consen 85 KGLYIPPGVWHGIKNFSED-SVLLVLASE 112 (131)
T ss_dssp EEEEE-TT-EEEEE---TT--EEEEEESS
T ss_pred eEEEECCchhhHhhccCCC-cEEEEEcCC
Confidence 4899999999999999876 554445443
No 30
>COG0662 {ManC} Mannose-6-phosphate isomerase [Carbohydrate transport and metabolism]
Probab=92.10 E-value=0.16 Score=43.35 Aligned_cols=25 Identities=28% Similarity=0.432 Sum_probs=23.4
Q ss_pred EEEEcCCCEEEeCCCceEEEEecCc
Q 015736 359 DCILDEGEMLYIPPKWWHYVRSLSI 383 (401)
Q Consensus 359 e~iL~pGD~LyIP~gWwH~V~sl~~ 383 (401)
+..|++||++|||+|-.|.++|.+.
T Consensus 76 ~~~v~~gd~~~iP~g~~H~~~N~G~ 100 (127)
T COG0662 76 EVEVKAGDSVYIPAGTPHRVRNTGK 100 (127)
T ss_pred EEEecCCCEEEECCCCcEEEEcCCC
Confidence 5789999999999999999999985
No 31
>PRK09943 DNA-binding transcriptional repressor PuuR; Provisional
Probab=91.45 E-value=1.2 Score=40.46 Aligned_cols=37 Identities=16% Similarity=-0.024 Sum_probs=30.9
Q ss_pred EEEEcCCCEEEeCCCceEEEEecCceEEEEeccCCCC
Q 015736 359 DCILDEGEMLYIPPKWWHYVRSLSISFSVSFWWSDGG 395 (401)
Q Consensus 359 e~iL~pGD~LyIP~gWwH~V~sl~~siSVs~wf~~~~ 395 (401)
+..|++||.+|||++=.|..+|.+..-+.-+|+..++
T Consensus 147 ~~~l~~Gd~~~~~~~~~H~~~n~~~~~~~~l~~~~p~ 183 (185)
T PRK09943 147 DYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPT 183 (185)
T ss_pred EEEecCCCEEEEcCCCCeeeeCCCCCCeEEEEEeCCC
Confidence 4679999999999999999999987766777766543
No 32
>TIGR02272 gentisate_1_2 gentisate 1,2-dioxygenase. This family consists of gentisate 1,2-dioxygenases. This ring-opening enzyme acts in salicylate degradation that goes via gentisate rather than via catechol. It converts gentisate to maleylpyruvate. Some putative gentisate 1,2-dioxygenases are excluded by a relatively high trusted cutoff score because they are too closely related to known examples of 1-hydroxy-2-naphthoate dioxygenase. Therefore some homologs may be bona fide gentisate 1,2-dioxygenases even if they score below the given cutoffs.
Probab=91.44 E-value=0.5 Score=47.19 Aligned_cols=58 Identities=19% Similarity=0.248 Sum_probs=45.6
Q ss_pred cCCCCCccccccCCceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEEEEcCCCEE
Q 015736 289 PAGTVTPLHHDPHHNILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDEGEML 368 (401)
Q Consensus 289 p~gt~splH~D~~~n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~pGD~L 368 (401)
++|..++.|......+...|.|.-.+.++ ....+..++||++
T Consensus 89 ~pGe~~~~HRht~sAl~~vveG~G~~t~V--------------------------------------~g~~~~~~~gD~~ 130 (335)
T TIGR02272 89 LPGEVAPSHRHTQSALRFIVEGKGAFTAV--------------------------------------DGERTTMHPGDFI 130 (335)
T ss_pred CCCCCCCccccccceEEEEEEcCceEEEE--------------------------------------CCEEEeeeCCCEE
Confidence 67888999998888888888886533331 1235889999999
Q ss_pred EeCCCceEEEEecCce
Q 015736 369 YIPPKWWHYVRSLSIS 384 (401)
Q Consensus 369 yIP~gWwH~V~sl~~s 384 (401)
++|+++||.=.|.++.
T Consensus 131 ~tP~w~wH~H~n~~d~ 146 (335)
T TIGR02272 131 ITPSWTWHDHGNPGDE 146 (335)
T ss_pred EeCCCeeEecccCCCC
Confidence 9999999998887654
No 33
>COG4101 Predicted mannose-6-phosphate isomerase [Carbohydrate transport and metabolism]
Probab=91.36 E-value=0.25 Score=41.53 Aligned_cols=25 Identities=32% Similarity=0.523 Sum_probs=23.0
Q ss_pred EEEEcCCCEEEeCCCceEEEEecCc
Q 015736 359 DCILDEGEMLYIPPKWWHYVRSLSI 383 (401)
Q Consensus 359 e~iL~pGD~LyIP~gWwH~V~sl~~ 383 (401)
.++..|||++|||+|--|+-.|++.
T Consensus 89 ha~~~pGDf~YiPpgVPHqp~N~S~ 113 (142)
T COG4101 89 HAEVGPGDFFYIPPGVPHQPANLST 113 (142)
T ss_pred eEEecCCCeEEcCCCCCCcccccCC
Confidence 5789999999999999999999874
No 34
>PF00908 dTDP_sugar_isom: dTDP-4-dehydrorhamnose 3,5-epimerase; InterPro: IPR000888 Deoxythymidine diphosphate (dTDP)-4-keto-6-deoxy-d-hexulose 3, 5-epimerase (RmlC, 5.1.3.13 from EC) is involved in the biosynthesis of dTDP-l-rhamnose, which is an essential component of the bacterial cell wall, converting dTDP-4-keto-6-deoxy-D-glucose to dTDP-4-keto-L-rhamnose. The crystal structure of RmlC from Methanobacterium thermoautotrophicum was determined in the presence and absence of a substrate analogue. RmlC is a homodimer comprising a central jelly roll motif, which extends in two directions into longer beta-sheets. Binding of dTDP is stabilised by ionic interactions to the phosphate group and by a combination of ionic and hydrophobic interactions with the base. The active site, which is located in the centre of the jelly roll, is formed by residues that are conserved in all known RmlC sequence homologues. The active site is lined with a number of charged residues and a number of residues with hydrogen-bonding potentials, which together comprise a potential network for substrate binding and catalysis. The active site is also lined with aromatic residues which provide favorable environments for the base moiety of dTDP and potentially for the sugar moiety of the substrate [].; GO: 0008830 dTDP-4-dehydrorhamnose 3,5-epimerase activity, 0009103 lipopolysaccharide biosynthetic process; PDB: 1EPZ_A 1EP0_A 1NXM_A 1NZC_D 2IXL_C 1NYW_B 2IXC_D 1PM7_B 1UPI_A 3RYK_B ....
Probab=90.42 E-value=1.6 Score=39.62 Aligned_cols=83 Identities=19% Similarity=0.221 Sum_probs=57.3
Q ss_pred ccceeeccCCCCCccccccCC----ceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCce
Q 015736 282 SLNAWFGPAGTVTPLHHDPHH----NILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEF 357 (401)
Q Consensus 282 ~~~~W~Gp~gt~splH~D~~~----n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~ 357 (401)
..|.-+..+|++=.+|+.... =+...++|+=.-+++..... | |.|. +.
T Consensus 44 q~n~S~s~~gvlRGlH~q~~~~~q~Klv~~~~G~i~dV~vDlR~~--------------S------------pTfg--~~ 95 (176)
T PF00908_consen 44 QDNISVSKKGVLRGLHYQSPPYAQAKLVRCLRGEIFDVAVDLRKG--------------S------------PTFG--KW 95 (176)
T ss_dssp EEEEEEEETTBEEEEEEESTTT-EEEEEEEEESEEEEEEEE-BTT--------------S------------TTTT---E
T ss_pred ceEEEEccccEEEEEEEecCCCCCCcEEEEecCeEEEEEEECCCC--------------C------------CCCC--EE
Confidence 346666777888889987753 47788899877777654321 1 2232 45
Q ss_pred EEEEEcCCC--EEEeCCCceEEEEecCceEEEEeccC
Q 015736 358 FDCILDEGE--MLYIPPKWWHYVRSLSISFSVSFWWS 392 (401)
Q Consensus 358 ~e~iL~pGD--~LyIP~gWwH~V~sl~~siSVs~wf~ 392 (401)
..++|.+++ +||||+|.+|...++++.-.|.+.-.
T Consensus 96 ~~~~Ls~~n~~~l~IP~G~aHGf~~l~d~a~v~Y~~t 132 (176)
T PF00908_consen 96 VSVELSAENPRQLYIPPGVAHGFQTLEDDAEVLYKVT 132 (176)
T ss_dssp EEEEEETTT--EEEE-TTEEEEEEESSSEEEEEEEES
T ss_pred EEEEeCccccCEEEeCCcceeeEEeccCceEEEEecC
Confidence 778888886 79999999999999998755655433
No 35
>PLN00212 glutelin; Provisional
Probab=88.19 E-value=2.8 Score=44.08 Aligned_cols=66 Identities=12% Similarity=0.229 Sum_probs=50.4
Q ss_pred CCCCCccccccC-CceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEEEEcCCCEE
Q 015736 290 AGTVTPLHHDPH-HNILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDEGEML 368 (401)
Q Consensus 290 ~gt~splH~D~~-~n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~pGD~L 368 (401)
+|+..+.|+.+. +.+..++.|+=++-++.+.- -.+++..|++||++
T Consensus 357 ~gam~~PHwn~nA~eI~yV~rG~g~vqvV~~~g---------------------------------~~vf~~~L~~Gdvf 403 (493)
T PLN00212 357 QNALLSPFWNVNAHSVVYITQGRARVQVVSNNG---------------------------------KTVFNGVLRPGQLL 403 (493)
T ss_pred CCcccCCeecCCCCEEEEEeecceEEEEEcCCC---------------------------------CEEEEEEEcCCCEE
Confidence 577778888876 45777888888888765420 13478999999999
Q ss_pred EeCCCceEEEEecCceEEEE
Q 015736 369 YIPPKWWHYVRSLSISFSVS 388 (401)
Q Consensus 369 yIP~gWwH~V~sl~~siSVs 388 (401)
+||.|+.|..++-+..+-+.
T Consensus 404 VVPqg~~v~~~A~~egfe~v 423 (493)
T PLN00212 404 IIPQHYAVLKKAEREGCQYI 423 (493)
T ss_pred EECCCCeEEEeecCCceEEE
Confidence 99999999988876665543
No 36
>TIGR02466 conserved hypothetical protein. This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
Probab=88.12 E-value=3.6 Score=38.15 Aligned_cols=99 Identities=22% Similarity=0.301 Sum_probs=52.0
Q ss_pred cccceee--ccCCCCCccccccCCceeEEEeeeeEEEEecCCCCCc-c-ccCcccccCCCCcccCCCcccccCCCCCCCc
Q 015736 281 RSLNAWF--GPAGTVTPLHHDPHHNILAQVVGKKYIRLYPASLSEE-L-YPYSETMLCNSSQVDLDNIDETKFPKVRDLE 356 (401)
Q Consensus 281 ~~~~~W~--Gp~gt~splH~D~~~n~l~qV~G~K~~~L~pP~~~~~-L-yp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~ 356 (401)
...+.|+ -.+|..-..|..+.. .+.|.=|+.+ |+..... + .|....++ +... ..++.. ...-.
T Consensus 94 ~i~~~W~ni~~~Gg~h~~H~Hp~~----~lSgvyYl~~-p~~~g~~~f~~p~~~~~~-~~~~---~~~~~~----~~~~~ 160 (201)
T TIGR02466 94 RIQKAWVNILPQGGTHSPHLHPGS----VISGTYYVQT-PENCGAIKFEDPRLDDMM-AAPM---RIPNAK----RAVQR 160 (201)
T ss_pred EEeeEeEEEcCCCCccCceECCCc----eEEEEEEEeC-CCCCCceeEecCcchhhh-cccc---ccCccc----cccCc
Confidence 3456786 456666688887743 5677666665 3332211 1 12111000 0000 000000 00112
Q ss_pred eEEEEEcCCCEEEeCCCceEEEEec---CceEEEEeccC
Q 015736 357 FFDCILDEGEMLYIPPKWWHYVRSL---SISFSVSFWWS 392 (401)
Q Consensus 357 ~~e~iL~pGD~LyIP~gWwH~V~sl---~~siSVs~wf~ 392 (401)
.+.+.-++|++|..|+.-||.|..- ++-|||||+++
T Consensus 161 ~~~v~P~~G~lvlFPS~L~H~v~p~~~~~~RISiSFNl~ 199 (201)
T TIGR02466 161 FVYVPPQEGRVLLFESWLRHEVPPNESEEERISVSFNYA 199 (201)
T ss_pred cEEECCCCCeEEEECCCCceecCCCCCCCCEEEEEEeeE
Confidence 3445569999999999999999865 34566666553
No 37
>PF02311 AraC_binding: AraC-like ligand binding domain; InterPro: IPR003313 This entry defines the arabinose-binding and dimerisation domain of the bacterial gene regulatory protein AraC. The crystal structure of the arabinose-binding and dimerization domain of the Escherichia coli gene regulatory protein AraC was determined in the presence and absence of L-arabinose. The arabinose-bound molecule shows that the protein adopts an unusual fold, binding sugar within a beta barrel and completely burying the arabinose with the amino-terminal arm of the protein. Dimer contacts in the presence of arabinose are mediated by an antiparallel coiled-coil. In the uncomplexed protein, the amino-terminal arm is disordered, uncovering the sugar-binding pocket and allowing it to serve as an oligomerization interface [].; GO: 0006355 regulation of transcription, DNA-dependent; PDB: 1XJA_B 2ARA_A 2AAC_B 2ARC_A.
Probab=85.77 E-value=4.1 Score=33.47 Aligned_cols=56 Identities=20% Similarity=0.231 Sum_probs=36.1
Q ss_pred cCCCCCccccccCCceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEEEEcCCCEE
Q 015736 289 PAGTVTPLHHDPHHNILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDEGEML 368 (401)
Q Consensus 289 p~gt~splH~D~~~n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~pGD~L 368 (401)
..+...+.|...+..+..++.|.-.+.+ ..-+..++|||++
T Consensus 11 ~~~~~~~~h~h~~~~i~~v~~G~~~~~~---------------------------------------~~~~~~l~~g~~~ 51 (136)
T PF02311_consen 11 SPNFEFPPHWHDFYEIIYVLSGEGTLHI---------------------------------------DGQEYPLKPGDLF 51 (136)
T ss_dssp STT-SEEEETT-SEEEEEEEEE-EEEEE---------------------------------------TTEEEEE-TT-EE
T ss_pred CCCCccCCEECCCEEEEEEeCCEEEEEE---------------------------------------CCEEEEEECCEEE
Confidence 3444556787777788888888766553 1135789999999
Q ss_pred EeCCCceEEEEecCc
Q 015736 369 YIPPKWWHYVRSLSI 383 (401)
Q Consensus 369 yIP~gWwH~V~sl~~ 383 (401)
+||+|=.|.....+.
T Consensus 52 li~p~~~H~~~~~~~ 66 (136)
T PF02311_consen 52 LIPPGQPHSYYPDSN 66 (136)
T ss_dssp EE-TTS-EEEEE-TT
T ss_pred EecCCccEEEecCCC
Confidence 999999999999873
No 38
>KOG0958 consensus DNA damage-responsive repressor GIS1/RPH1, jumonji superfamily [Replication, recombination and repair]
Probab=85.69 E-value=0.41 Score=51.20 Aligned_cols=109 Identities=17% Similarity=0.165 Sum_probs=75.6
Q ss_pred ccceeeccCCCCCccccccCC--ceeEEEeee-eEEEEecCCCCCccccCcccccCCCCc---------ccCCCcc-ccc
Q 015736 282 SLNAWFGPAGTVTPLHHDPHH--NILAQVVGK-KYIRLYPASLSEELYPYSETMLCNSSQ---------VDLDNID-ETK 348 (401)
Q Consensus 282 ~~~~W~Gp~gt~splH~D~~~--n~l~qV~G~-K~~~L~pP~~~~~Lyp~~~~~~~ntS~---------vD~~~~d-~~~ 348 (401)
..++++|.=.|.-++|.+-++ .++..-.|. |.|..+||.....+.......-...++ +=+..|+ +.+
T Consensus 174 t~yLyfGmwKttFaWHtEdmDLySINyLHFGaPK~WYaIP~eh~~rfekla~~~fp~~~~~C~aFLRHK~~LiSP~~Lkq 253 (690)
T KOG0958|consen 174 TPYLYFGMWKTTFAWHTEDMDLYSINYLHFGAPKQWYAIPPEHGDRFEKLASELFPDSSQGCPAFLRHKMTLISPSVLKQ 253 (690)
T ss_pred ccceeeeeeecccccccCCccceeeeeeecCCCcceeecCHHHHHHHHHHHHhhCCccccCCHHHHhhcccccCHHHHHH
Confidence 457899999999999998875 566667786 999999999876554321111000000 0011111 111
Q ss_pred CCCCCCCceEEEEEcCCCEEEeCCCceEEEEecCceEEEEeccCCC
Q 015736 349 FPKVRDLEFFDCILDEGEMLYIPPKWWHYVRSLSISFSVSFWWSDG 394 (401)
Q Consensus 349 fP~~~~a~~~e~iL~pGD~LyIP~gWwH~V~sl~~siSVs~wf~~~ 394 (401)
.+.++...++++||.+.-=++=+|.--|++.+++=+++|...
T Consensus 254 ----nGIpfn~ivqeagEFmITFPygyHaGFN~GfN~aES~nFat~ 295 (690)
T KOG0958|consen 254 ----NGIPFNRIVQEAGEFMITFPYGYHAGFNHGFNCAESTNFATP 295 (690)
T ss_pred ----cCCCcceeeecCCcEEEecCcccccccccchhhhhhhcccch
Confidence 135788999999999999999999999999988888888654
No 39
>PRK13290 ectC L-ectoine synthase; Reviewed
Probab=85.05 E-value=1.7 Score=37.19 Aligned_cols=26 Identities=19% Similarity=0.145 Sum_probs=23.5
Q ss_pred EEEEcCCCEEEeCCCceEEEEecCce
Q 015736 359 DCILDEGEMLYIPPKWWHYVRSLSIS 384 (401)
Q Consensus 359 e~iL~pGD~LyIP~gWwH~V~sl~~s 384 (401)
+..|+|||++|+|++=.|..+|.++.
T Consensus 76 ~~~L~aGD~i~~~~~~~H~~~N~e~~ 101 (125)
T PRK13290 76 VHPIRPGTMYALDKHDRHYLRAGEDM 101 (125)
T ss_pred EEEeCCCeEEEECCCCcEEEEcCCCE
Confidence 57899999999999999999998653
No 40
>PF09313 DUF1971: Domain of unknown function (DUF1971); InterPro: IPR015392 This uncharacterised domain is predominantly found in bacterial Tellurite resistance proteins. ; PDB: 3BB6_C 3M70_A 3DL3_I.
Probab=82.56 E-value=9.1 Score=30.25 Aligned_cols=53 Identities=19% Similarity=0.180 Sum_probs=38.2
Q ss_pred ceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEEEEcCCCEEEeCCCceEEEEecC
Q 015736 303 NILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDEGEMLYIPPKWWHYVRSLS 382 (401)
Q Consensus 303 n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~pGD~LyIP~gWwH~V~sl~ 382 (401)
..+..+.|+=+++.+.++.. ....++.+.+|+.-+|||.-||.|..++
T Consensus 27 g~l~Vl~G~L~f~~~~~~~~--------------------------------~~~~~~~~~~~~~~~i~Pq~wH~V~p~s 74 (82)
T PF09313_consen 27 GKLRVLEGELKFYGLDEEGE--------------------------------EPEEEVFIPAGQPPVIEPQQWHRVEPLS 74 (82)
T ss_dssp EEEEEEESEEEEEEESSTT---------------------------------SESEEEEEETTEEEEE-TT-EEEEEESS
T ss_pred EEEEEEeeEEEEEEECCCCC--------------------------------ceeEEEEeCCCCCceeCCCceEEEEECC
Confidence 35778899988888776421 1225789999999999999999999998
Q ss_pred ceEEE
Q 015736 383 ISFSV 387 (401)
Q Consensus 383 ~siSV 387 (401)
+-+.+
T Consensus 75 ~D~~f 79 (82)
T PF09313_consen 75 DDLRF 79 (82)
T ss_dssp TT-EE
T ss_pred CCEEE
Confidence 74443
No 41
>TIGR03214 ura-cupin putative allantoin catabolism protein. This model represents a protein containing a tandem arrangement of cupin domains (N-terminal part of pfam07883 and C-terminal more distantly related to pfam00190). This protein is found in the vicinity of genes involved in the catabolism of allantoin, a breakdown product of urate and sometimes of urate iteslf. The distribution of pathway components in the genomes in which this family is observed suggests that the function is linked to the allantoate catabolism to glyoxylate pathway (GenProp0686) since it is sometimes found in genomes lacking any elements of the xanthine-to-allantoin pathways (e.g. in Enterococcus faecalis).
Probab=82.32 E-value=5.9 Score=38.14 Aligned_cols=35 Identities=20% Similarity=0.251 Sum_probs=28.5
Q ss_pred EEEEcCCCEEEeCCCceEEEEecCceEEEEeccCC
Q 015736 359 DCILDEGEMLYIPPKWWHYVRSLSISFSVSFWWSD 393 (401)
Q Consensus 359 e~iL~pGD~LyIP~gWwH~V~sl~~siSVs~wf~~ 393 (401)
+.+|++||.+|+|++--|..+|.+..-+.=+|.+.
T Consensus 99 ~~~L~~Gd~~y~pa~~~H~~~N~~~~~a~~l~v~k 133 (260)
T TIGR03214 99 THELREGGYAYLPPGSKWTLANAQAEDARFFLYKK 133 (260)
T ss_pred EEEECCCCEEEECCCCCEEEEECCCCCEEEEEEEe
Confidence 46899999999999999999998865555556553
No 42
>KOG2508 consensus Predicted phospholipase [Lipid transport and metabolism]
Probab=79.22 E-value=3.2 Score=41.46 Aligned_cols=44 Identities=27% Similarity=0.647 Sum_probs=36.2
Q ss_pred CCCCCceEEEEEcCCCEEEeCCCceEEEEecC-------ceEEEEeccCCC
Q 015736 351 KVRDLEFFDCILDEGEMLYIPPKWWHYVRSLS-------ISFSVSFWWSDG 394 (401)
Q Consensus 351 ~~~~a~~~e~iL~pGD~LyIP~gWwH~V~sl~-------~siSVs~wf~~~ 394 (401)
..+..-++.+.+++||++|+|.-|.|.|.+-+ ..|.+++||...
T Consensus 354 ~lA~~~~l~v~~~~~~~~~l~~~~~~~~~~~~~ssg~~~v~l~~~y~~~~~ 404 (437)
T KOG2508|consen 354 ALAGTVPLVVDLEPGDMLYLPASWFHEVTSSSASSGGSDVHIAFNYWFHPE 404 (437)
T ss_pred ccccceeEEEecccCceeeechhheeeeeccccccCCcceeEEeecccccc
Confidence 34445679999999999999999999998753 358999999764
No 43
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=78.19 E-value=3.2 Score=33.66 Aligned_cols=35 Identities=26% Similarity=0.495 Sum_probs=23.2
Q ss_pred ceEEEEEcCCCEEEeCCCceEEEEecC---ceEEEEec
Q 015736 356 EFFDCILDEGEMLYIPPKWWHYVRSLS---ISFSVSFW 390 (401)
Q Consensus 356 ~~~e~iL~pGD~LyIP~gWwH~V~sl~---~siSVs~w 390 (401)
..+....++||+|..|+.-+|.|..-. +=|||+|+
T Consensus 64 ~~~~~~p~~G~lvlFPs~l~H~v~p~~~~~~RisisfN 101 (101)
T PF13759_consen 64 PYYIVEPEEGDLVLFPSWLWHGVPPNNSDEERISISFN 101 (101)
T ss_dssp SEEEE---TTEEEEEETTSEEEE----SSS-EEEEEEE
T ss_pred ceEEeCCCCCEEEEeCCCCEEeccCcCCCCCEEEEEcC
Confidence 567788999999999999999997653 46777764
No 44
>PF05899 Cupin_3: Protein of unknown function (DUF861); InterPro: IPR008579 The function of the proteins in this entry are unknown. They contain the conserved barrel domain of the 'cupin' superfamily and members are specific to plants and bacteria.; PDB: 1RC6_A 3MYX_A 1O5U_A 2K9Z_A 1LKN_A 3ES4_A 1SFN_B 3BCW_A.
Probab=78.01 E-value=1.6 Score=33.57 Aligned_cols=16 Identities=19% Similarity=0.843 Sum_probs=13.9
Q ss_pred EEEEcCCCEEEeCCCc
Q 015736 359 DCILDEGEMLYIPPKW 374 (401)
Q Consensus 359 e~iL~pGD~LyIP~gW 374 (401)
...+.|||++|+|.||
T Consensus 45 ~~~~~aGD~~~~p~G~ 60 (74)
T PF05899_consen 45 TVTFKAGDAFFLPKGW 60 (74)
T ss_dssp EEEEETTEEEEE-TTE
T ss_pred EEEEcCCcEEEECCCC
Confidence 4789999999999999
No 45
>PF01050 MannoseP_isomer: Mannose-6-phosphate isomerase; InterPro: IPR001538 Mannose-6-phosphate isomerase or phosphomannose isomerase (5.3.1.8 from EC) (PMI) is the enzyme that catalyses the interconversion of mannose-6-phosphate and fructose-6-phosphate. In eukaryotes PMI is involved in the synthesis of GDP-mannose, a constituent of N- and O-linked glycans and GPI anchors and in prokaryotes it participates in a variety of pathways, including capsular polysaccharide biosynthesis and D-mannose metabolism. PMI's belong to the cupin superfamily whose functions range from isomerase and epimerase activities involved in the modification of cell wall carbohydrates in bacteria and plants, to non-enzymatic storage proteins in plant seeds, and transcription factors linked to congenital baldness in mammals []. Three classes of PMI have been defined []. The type II phosphomannose isomerases are bifunctional enzymes 5.3.1.8 from EC. This entry covers the isomerase region of the protein []. The guanosine diphospho-D-mannose pyrophosphorylase region is described in another InterPro entry (see IPR005836 from INTERPRO).; GO: 0016779 nucleotidyltransferase activity, 0005976 polysaccharide metabolic process
Probab=75.41 E-value=3.7 Score=36.27 Aligned_cols=25 Identities=28% Similarity=0.454 Sum_probs=22.3
Q ss_pred EEEEcCCCEEEeCCCceEEEEecCc
Q 015736 359 DCILDEGEMLYIPPKWWHYVRSLSI 383 (401)
Q Consensus 359 e~iL~pGD~LyIP~gWwH~V~sl~~ 383 (401)
.-.+.+||.+|||.|-.|.+.|.+.
T Consensus 103 ~~~~~~g~sv~Ip~g~~H~i~n~g~ 127 (151)
T PF01050_consen 103 EFTLKEGDSVYIPRGAKHRIENPGK 127 (151)
T ss_pred EEEEcCCCEEEECCCCEEEEECCCC
Confidence 4679999999999999999999763
No 46
>TIGR01479 GMP_PMI mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase (EC 5.3.1.8) (PMI) and mannose-1-phosphate guanylyltransferase (EC 2.7.7.22) in Pseudomonas aeruginosa, Xanthomonas campestris, and Gluconacetobacter xylinus. The literature on the enzyme from E. coli attributes mannose-6-phosphate isomerase activity to an adjacent gene, but the present sequence has not been shown to lack the activity. The PMI domain is C-terminal.
Probab=73.45 E-value=16 Score=38.25 Aligned_cols=27 Identities=26% Similarity=0.241 Sum_probs=24.1
Q ss_pred EEEEEcCCCEEEeCCCceEEEEecCce
Q 015736 358 FDCILDEGEMLYIPPKWWHYVRSLSIS 384 (401)
Q Consensus 358 ~e~iL~pGD~LyIP~gWwH~V~sl~~s 384 (401)
-+..|++||.+|||++=-|.++|.+..
T Consensus 415 ~~~~l~~GDsi~ip~~~~H~~~N~g~~ 441 (468)
T TIGR01479 415 ETLLLTENESTYIPLGVIHRLENPGKI 441 (468)
T ss_pred EEEEecCCCEEEECCCCcEEEEcCCCC
Confidence 357899999999999999999998753
No 47
>COG3450 Predicted enzyme of the cupin superfamily [General function prediction only]
Probab=71.81 E-value=3.3 Score=35.00 Aligned_cols=21 Identities=10% Similarity=0.150 Sum_probs=17.2
Q ss_pred EEEEcCCCEEEeCCCceEEEE
Q 015736 359 DCILDEGEMLYIPPKWWHYVR 379 (401)
Q Consensus 359 e~iL~pGD~LyIP~gWwH~V~ 379 (401)
-..++|||.+|+|+||+=-=+
T Consensus 83 ~v~~~aGD~~~~~~G~~g~W~ 103 (116)
T COG3450 83 PVEVRAGDSFVFPAGFKGTWE 103 (116)
T ss_pred EEEEcCCCEEEECCCCeEEEE
Confidence 477999999999999974433
No 48
>PF03079 ARD: ARD/ARD' family; InterPro: IPR004313 The two acireductone dioxygenase enzymes (ARD and ARD', previously known as E-2 and E-2') from Klebsiella pneumoniae share the same amino acid sequence Q9ZFE7 from SWISSPROT, but bind different metal ions: ARD binds Ni2+, ARD' binds Fe2+ []. ARD and ARD' can be experimentally interconverted by removal of the bound metal ion and reconstitution with the appropriate metal ion. The two enzymes share the same substrate, 1,2-dihydroxy-3-keto-5-(methylthio)pentene, but yield different products. ARD' yields the alpha-keto precursor of methionine (and formate), thus forming part of the ubiquitous methionine salvage pathway that converts 5'-methylthioadenosine (MTA) to methionine. This pathway is responsible for the tight control of the concentration of MTA, which is a powerful inhibitor of polyamine biosynthesis and transmethylation reactions []. ARD yields methylthiopropanoate, carbon monoxide and formate, and thus prevents the conversion of MTA to methionine. The role of the ARD catalysed reaction is unclear: methylthiopropanoate is cytotoxic, and carbon monoxide can activate guanylyl cyclase, leading to increased intracellular cGMP levels [, ]. This family also contains other proteins, whose functions are not well characterised.; GO: 0010309 acireductone dioxygenase [iron(II)-requiring] activity, 0055114 oxidation-reduction process; PDB: 1VR3_A 1ZRR_A 2HJI_A.
Probab=70.10 E-value=11 Score=33.60 Aligned_cols=39 Identities=13% Similarity=0.251 Sum_probs=25.7
Q ss_pred ceEEEEEcCCCEEEeCCCceEEEEec-CceEEEEeccCCC
Q 015736 356 EFFDCILDEGEMLYIPPKWWHYVRSL-SISFSVSFWWSDG 394 (401)
Q Consensus 356 ~~~e~iL~pGD~LyIP~gWwH~V~sl-~~siSVs~wf~~~ 394 (401)
.+..+.+++||+|.||+|-.|...-- ++.|..=-.|..+
T Consensus 113 ~wiri~~e~GDli~vP~g~~HrF~~~~~~~i~aiRlF~~~ 152 (157)
T PF03079_consen 113 VWIRILCEKGDLIVVPAGTYHRFTLGESPYIKAIRLFKDE 152 (157)
T ss_dssp EEEEEEEETTCEEEE-TT--EEEEESTTSSEEEEEEESSC
T ss_pred EEEEEEEcCCCEEecCCCCceeEEcCCCCcEEEEEeecCC
Confidence 45679999999999999999998643 3455555555444
No 49
>TIGR03214 ura-cupin putative allantoin catabolism protein. This model represents a protein containing a tandem arrangement of cupin domains (N-terminal part of pfam07883 and C-terminal more distantly related to pfam00190). This protein is found in the vicinity of genes involved in the catabolism of allantoin, a breakdown product of urate and sometimes of urate iteslf. The distribution of pathway components in the genomes in which this family is observed suggests that the function is linked to the allantoate catabolism to glyoxylate pathway (GenProp0686) since it is sometimes found in genomes lacking any elements of the xanthine-to-allantoin pathways (e.g. in Enterococcus faecalis).
Probab=69.83 E-value=5.3 Score=38.49 Aligned_cols=26 Identities=4% Similarity=-0.066 Sum_probs=23.5
Q ss_pred EEEEEcCCCEEEeCCCceEEEEecCc
Q 015736 358 FDCILDEGEMLYIPPKWWHYVRSLSI 383 (401)
Q Consensus 358 ~e~iL~pGD~LyIP~gWwH~V~sl~~ 383 (401)
-...+++||++|||++--|+..|.+.
T Consensus 218 ~~~~V~~GD~i~i~~~~~h~~~~~G~ 243 (260)
T TIGR03214 218 NWVPVEAGDYIWMGAYCPQACYAGGR 243 (260)
T ss_pred EEEEecCCCEEEECCCCCEEEEecCC
Confidence 35789999999999999999999875
No 50
>PRK13502 transcriptional activator RhaR; Provisional
Probab=67.23 E-value=21 Score=34.01 Aligned_cols=26 Identities=19% Similarity=0.234 Sum_probs=21.9
Q ss_pred EEEEEcCCCEEEeCCCceEEEEecCc
Q 015736 358 FDCILDEGEMLYIPPKWWHYVRSLSI 383 (401)
Q Consensus 358 ~e~iL~pGD~LyIP~gWwH~V~sl~~ 383 (401)
.+..++|||+++||++=.|.....+.
T Consensus 56 ~~~~l~~g~l~li~~~~~H~~~~~~~ 81 (282)
T PRK13502 56 RPYRITRGDLFYIRAEDKHSYTSVND 81 (282)
T ss_pred EEEeecCCcEEEECCCCcccccccCC
Confidence 35789999999999999998876554
No 51
>COG4766 EutQ Ethanolamine utilization protein [Amino acid transport and metabolism]
Probab=66.81 E-value=20 Score=31.63 Aligned_cols=17 Identities=24% Similarity=0.493 Sum_probs=14.0
Q ss_pred EEEEEcCCCEEEeCCCc
Q 015736 358 FDCILDEGEMLYIPPKW 374 (401)
Q Consensus 358 ~e~iL~pGD~LyIP~gW 374 (401)
-.++-+|||++|||.|=
T Consensus 136 ~tv~a~aGDvifiPKgs 152 (176)
T COG4766 136 RTVIAGAGDVIFIPKGS 152 (176)
T ss_pred CeEecCCCcEEEecCCC
Confidence 34677899999999984
No 52
>TIGR02272 gentisate_1_2 gentisate 1,2-dioxygenase. This family consists of gentisate 1,2-dioxygenases. This ring-opening enzyme acts in salicylate degradation that goes via gentisate rather than via catechol. It converts gentisate to maleylpyruvate. Some putative gentisate 1,2-dioxygenases are excluded by a relatively high trusted cutoff score because they are too closely related to known examples of 1-hydroxy-2-naphthoate dioxygenase. Therefore some homologs may be bona fide gentisate 1,2-dioxygenases even if they score below the given cutoffs.
Probab=66.39 E-value=22 Score=35.64 Aligned_cols=68 Identities=16% Similarity=0.159 Sum_probs=49.2
Q ss_pred eccCCCCCccccccCCceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEEEEcCCC
Q 015736 287 FGPAGTVTPLHHDPHHNILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDEGE 366 (401)
Q Consensus 287 ~Gp~gt~splH~D~~~n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~pGD 366 (401)
+=++|..|..|......++.+|.|+=+.++ + -.....++||
T Consensus 256 ~L~~G~~t~~~r~T~s~Vf~VieG~G~s~i-----------------------g----------------~~~~~W~~gD 296 (335)
T TIGR02272 256 LLPKGFRTATYRSTDATVFCVVEGRGQVRI-----------------------G----------------DAVFRFSPKD 296 (335)
T ss_pred ccCCCCCCCCccccccEEEEEEeCeEEEEE-----------------------C----------------CEEEEecCCC
Confidence 357888899999888888899999765554 0 0246799999
Q ss_pred EEEeCCCceEEEEecCceEEEEeccCCCC
Q 015736 367 MLYIPPKWWHYVRSLSISFSVSFWWSDGG 395 (401)
Q Consensus 367 ~LyIP~gWwH~V~sl~~siSVs~wf~~~~ 395 (401)
++.||+.-+|.-.+.++ ++=|++...|
T Consensus 297 ~f~vPsW~~~~h~a~~d--a~Lf~~~D~P 323 (335)
T TIGR02272 297 VFVVPSWHPVRFEASDD--AVLFSFSDRP 323 (335)
T ss_pred EEEECCCCcEecccCCC--eEEEEecCHH
Confidence 99999977777666655 3455555543
No 53
>PRK15457 ethanolamine utilization protein EutQ; Provisional
Probab=66.15 E-value=9.6 Score=36.01 Aligned_cols=23 Identities=17% Similarity=0.238 Sum_probs=18.9
Q ss_pred EEEEEcCCCEEEeCCCceEEEEe
Q 015736 358 FDCILDEGEMLYIPPKWWHYVRS 380 (401)
Q Consensus 358 ~e~iL~pGD~LyIP~gWwH~V~s 380 (401)
.+.+++|||++|||.|=.|+..+
T Consensus 193 ~t~~l~pGDvlfIPkGs~~hf~t 215 (233)
T PRK15457 193 ETMIAKAGDVMFIPKGSSIEFGT 215 (233)
T ss_pred EEEEeCCCcEEEECCCCeEEecC
Confidence 35789999999999999955544
No 54
>PRK11171 hypothetical protein; Provisional
Probab=64.45 E-value=10 Score=36.66 Aligned_cols=33 Identities=24% Similarity=0.345 Sum_probs=26.4
Q ss_pred EEEEcCCCEEEeCCCceEEEEecCceEEEEecc
Q 015736 359 DCILDEGEMLYIPPKWWHYVRSLSISFSVSFWW 391 (401)
Q Consensus 359 e~iL~pGD~LyIP~gWwH~V~sl~~siSVs~wf 391 (401)
+.+|++||.+|+|++=-|..+|.++.-+.=.|.
T Consensus 102 ~~~L~~GDsi~~p~~~~H~~~N~g~~~a~~l~v 134 (266)
T PRK11171 102 THALSEGGYAYLPPGSDWTLRNAGAEDARFHWI 134 (266)
T ss_pred EEEECCCCEEEECCCCCEEEEECCCCCEEEEEE
Confidence 578999999999999999999987543333333
No 55
>PF05995 CDO_I: Cysteine dioxygenase type I; InterPro: IPR010300 Cysteine dioxygenase type I (1.13.11.20 from EC) converts cysteine to cysteinesulphinic acid and is the rate-limiting step in sulphate production.; GO: 0005506 iron ion binding, 0017172 cysteine dioxygenase activity, 0046439 L-cysteine metabolic process, 0055114 oxidation-reduction process; PDB: 2IC1_A 3EQE_B 3ELN_A 2B5H_A 2GH2_A 2Q4S_A 2ATF_A 2GM6_A 3USS_B.
Probab=63.30 E-value=34 Score=30.78 Aligned_cols=75 Identities=21% Similarity=0.183 Sum_probs=42.0
Q ss_pred cCCCCCcccccc-CCceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEEEEcCCCE
Q 015736 289 PAGTVTPLHHDP-HHNILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDEGEM 367 (401)
Q Consensus 289 p~gt~splH~D~-~~n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~pGD~ 367 (401)
++|..||.|=.. ..-++.++.|.=+-..|..... .. .|.. .......+.+|.+
T Consensus 83 ~pGq~S~IHDH~~s~g~~~vl~G~l~e~~y~~~~~-~~-----------------------~~~~--~~~~~~~~~~g~~ 136 (175)
T PF05995_consen 83 PPGQRSPIHDHGGSWGWVKVLSGELEETRYRRPDD-GG-----------------------APLE--LVGRERLLPGGVT 136 (175)
T ss_dssp -TT-B--EEE-TTSEEEEEEEESEEEEEEEEESTS-SS------------------------EEE--ECEEEEEETTTEE
T ss_pred CCCCcCCCCCCCCceEEEEEecceEEEEEeccCCc-cc-----------------------Cccc--ccCceEecCCCeE
Confidence 678999999544 3467889999865555543322 00 0000 0123456788888
Q ss_pred EEeCCCceEEEEecC-ceEEEEe
Q 015736 368 LYIPPKWWHYVRSLS-ISFSVSF 389 (401)
Q Consensus 368 LyIP~gWwH~V~sl~-~siSVs~ 389 (401)
.+.+.+..|+|.|.+ +..+||+
T Consensus 137 ~~~~~~~iH~v~n~s~~~~avSL 159 (175)
T PF05995_consen 137 YIFDPHGIHRVENPSGDEPAVSL 159 (175)
T ss_dssp EEBTTTBEEEEEES-SSS-EEEE
T ss_pred EecCCCCeEEeccCCCCCCEEEE
Confidence 888999999998875 4444443
No 56
>COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=62.32 E-value=8.8 Score=37.51 Aligned_cols=51 Identities=14% Similarity=0.276 Sum_probs=34.3
Q ss_pred CCCcccccCCCCCCCceEEEEEcCCCEEEeCCCceEEEEecCce---EEEEeccCCC
Q 015736 341 LDNIDETKFPKVRDLEFFDCILDEGEMLYIPPKWWHYVRSLSIS---FSVSFWWSDG 394 (401)
Q Consensus 341 ~~~~d~~~fP~~~~a~~~e~iL~pGD~LyIP~gWwH~V~sl~~s---iSVs~wf~~~ 394 (401)
+..+|-+.|++- ....+.|++||+|+.=+.=||....-..+ .++++.|...
T Consensus 179 ~~r~d~~~y~~~---~~~pv~lekGDallF~~~L~HaA~aNrT~~~R~A~~~~~~~~ 232 (299)
T COG5285 179 PERPDHETYLER---NAVPVELEKGDALLFNGSLWHAAGANRTSADRVALTLQFTVS 232 (299)
T ss_pred CCCCCccchhhh---cceeeeecCCCEEEEcchhhhhhhcCCCCcccceEEEEEeec
Confidence 444554444431 24668899999999999999999765433 5666665543
No 57
>PF06249 EutQ: Ethanolamine utilisation protein EutQ; InterPro: IPR010424 The eut operon of Salmonella typhimurium encodes proteins involved in the cobalamin-dependent degradation of ethanolamine. The role of EutQ in this process is unclear [].; PDB: 2PYT_B 3LWC_A.
Probab=60.12 E-value=6.8 Score=34.69 Aligned_cols=17 Identities=18% Similarity=0.413 Sum_probs=12.3
Q ss_pred EEEEEcCCCEEEeCCCc
Q 015736 358 FDCILDEGEMLYIPPKW 374 (401)
Q Consensus 358 ~e~iL~pGD~LyIP~gW 374 (401)
...+.+|||+||||.|=
T Consensus 113 ~~~~A~~GDvi~iPkGs 129 (152)
T PF06249_consen 113 QTVTAKPGDVIFIPKGS 129 (152)
T ss_dssp EEEEEETT-EEEE-TT-
T ss_pred EEEEEcCCcEEEECCCC
Confidence 46789999999999984
No 58
>PLN00212 glutelin; Provisional
Probab=59.49 E-value=55 Score=34.60 Aligned_cols=85 Identities=14% Similarity=0.117 Sum_probs=49.5
Q ss_pred eccCCCCCccccccCCceeEEEeeeeEEEEecCCCCCc---cccCcccccCCCCcccCCCcccccCCCCCCCceEEEEEc
Q 015736 287 FGPAGTVTPLHHDPHHNILAQVVGKKYIRLYPASLSEE---LYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILD 363 (401)
Q Consensus 287 ~Gp~gt~splH~D~~~n~l~qV~G~K~~~L~pP~~~~~---Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~ 363 (401)
|.|.|-. ..||-...-++..+.|+=.+-+.-|...+. .+..... ...+ .--.+++-.--.-.++
T Consensus 87 i~p~gL~-lP~y~na~~liyV~qG~G~~G~v~pGcpeT~~~~~~~~~~--~~~~----------~~~~~~d~hqkv~~lr 153 (493)
T PLN00212 87 IEPQGLL-LPRYSNTPGLVYIIQGRGSMGLTFPGCPATYQQQFQQFLT--EGQS----------QSQKFRDEHQKIHQFR 153 (493)
T ss_pred ecCCccc-CccccCCCeEEEEEeCeEEEEEEeCCCcchhhhhcccccc--cccc----------cccccccccccceEec
Confidence 4555554 444444466778899998888887764322 1110000 0000 0111222111235799
Q ss_pred CCCEEEeCCCceEEEEecCce
Q 015736 364 EGEMLYIPPKWWHYVRSLSIS 384 (401)
Q Consensus 364 pGD~LyIP~gWwH~V~sl~~s 384 (401)
+||++.||+|--|+..|.+++
T Consensus 154 ~GDViaiPaG~~hw~yN~Gd~ 174 (493)
T PLN00212 154 QGDVVALPAGVAHWFYNDGDA 174 (493)
T ss_pred cCCEEEECCCCeEEEEeCCCC
Confidence 999999999999999998764
No 59
>COG1791 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]
Probab=56.60 E-value=40 Score=30.45 Aligned_cols=51 Identities=18% Similarity=0.400 Sum_probs=36.8
Q ss_pred ccccccCCceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEEEEcCCCEEEeCCCc
Q 015736 295 PLHHDPHHNILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDEGEMLYIPPKW 374 (401)
Q Consensus 295 plH~D~~~n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~pGD~LyIP~gW 374 (401)
.+|.|.- .-..|.|.-.|.+-+++. +.+...+++||.|-||+|-
T Consensus 91 H~H~d~E--vRy~vaG~GiF~v~~~d~----------------------------------~~~~i~c~~gDLI~vP~gi 134 (181)
T COG1791 91 HLHTDDE--VRYFVAGEGIFDVHSPDG----------------------------------KVYQIRCEKGDLISVPPGI 134 (181)
T ss_pred hccCCce--EEEEEecceEEEEECCCC----------------------------------cEEEEEEccCCEEecCCCc
Confidence 4666653 333578888888766652 3467788999999999999
Q ss_pred eEEEEec
Q 015736 375 WHYVRSL 381 (401)
Q Consensus 375 wH~V~sl 381 (401)
.|...--
T Consensus 135 ~HwFtlt 141 (181)
T COG1791 135 YHWFTLT 141 (181)
T ss_pred eEEEEcc
Confidence 9986543
No 60
>KOG2107 consensus Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]
Probab=56.18 E-value=16 Score=32.69 Aligned_cols=29 Identities=10% Similarity=0.473 Sum_probs=24.8
Q ss_pred ceEEEEEcCCCEEEeCCCceEEEEecCce
Q 015736 356 EFFDCILDEGEMLYIPPKWWHYVRSLSIS 384 (401)
Q Consensus 356 ~~~e~iL~pGD~LyIP~gWwH~V~sl~~s 384 (401)
..+.+-++.||+++||+|=+|.......+
T Consensus 114 ~WIRi~vekGDlivlPaGiyHRFTtt~~n 142 (179)
T KOG2107|consen 114 QWIRIFVEKGDLIVLPAGIYHRFTTTPSN 142 (179)
T ss_pred CEEEEEEecCCEEEecCcceeeeecCchH
Confidence 56889999999999999999998765543
No 61
>PRK15131 mannose-6-phosphate isomerase; Provisional
Probab=52.92 E-value=11 Score=38.58 Aligned_cols=23 Identities=17% Similarity=0.114 Sum_probs=20.3
Q ss_pred EEEEEcCCCEEEeCCCceEEEEe
Q 015736 358 FDCILDEGEMLYIPPKWWHYVRS 380 (401)
Q Consensus 358 ~e~iL~pGD~LyIP~gWwH~V~s 380 (401)
-.+.|+|||++|||+|--|...+
T Consensus 237 N~v~l~pGeaifipAg~~HAyl~ 259 (389)
T PRK15131 237 NVVKLNPGEAMFLFAETPHAYLQ 259 (389)
T ss_pred eEEEeCCCCEEEeCCCCCeEEcC
Confidence 46789999999999999998654
No 62
>PF10014 2OG-Fe_Oxy_2: 2OG-Fe dioxygenase; InterPro: IPR018724 Members of this family of hypothetical bacterial proteins have no known function. Some are described as putative biofilm formation or putative agglutination proteins. ; PDB: 3PL0_B.
Probab=52.63 E-value=17 Score=33.48 Aligned_cols=61 Identities=23% Similarity=0.508 Sum_probs=35.6
Q ss_pred ccccccCCceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEEEEcCCCEEEeC-CC
Q 015736 295 PLHHDPHHNILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDEGEMLYIP-PK 373 (401)
Q Consensus 295 plH~D~~~n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~pGD~LyIP-~g 373 (401)
.+|.|..+-..+.+.||+.+. +..|.|.. .-++.......++|||+|++- ..
T Consensus 117 GiH~DG~d~v~~~li~r~Ni~------------------GG~s~i~~---------~~~~~~~~~~l~~p~d~l~~~D~~ 169 (195)
T PF10014_consen 117 GIHRDGVDFVFIHLINRHNIE------------------GGESQIYD---------NDKEILFFFTLLEPGDTLLVDDRR 169 (195)
T ss_dssp SSB--SSSEEEEEEEEEESEE------------------E--EEEEE---------TTSSEEEEE---STTEEEEEETTT
T ss_pred CccCCCCCEEEEEEEcCCCcc------------------CceEEEEe---------CCCCcceEEEecCCCCEEEEeCCc
Confidence 499999987778888876551 11122210 012234567899999999999 99
Q ss_pred ceEEEEecC
Q 015736 374 WWHYVRSLS 382 (401)
Q Consensus 374 WwH~V~sl~ 382 (401)
-||+|..+.
T Consensus 170 ~~H~vtpI~ 178 (195)
T PF10014_consen 170 VWHYVTPIR 178 (195)
T ss_dssp EEEEE--EE
T ss_pred ceECCCcee
Confidence 999998764
No 63
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=52.31 E-value=15 Score=29.20 Aligned_cols=30 Identities=23% Similarity=0.609 Sum_probs=25.6
Q ss_pred EcCCCEEEeCC-CceEEEEec-C--ceEEEEecc
Q 015736 362 LDEGEMLYIPP-KWWHYVRSL-S--ISFSVSFWW 391 (401)
Q Consensus 362 L~pGD~LyIP~-gWwH~V~sl-~--~siSVs~wf 391 (401)
-++|+++++|. ..||.|... . .=++|++||
T Consensus 66 p~~g~~v~F~~~~~~H~v~~v~~~~~R~~l~~~~ 99 (100)
T PF13640_consen 66 PKPGRLVIFPSDNSLHGVTPVGEGGRRYSLTFWF 99 (100)
T ss_dssp -BTTEEEEEESCTCEEEEEEE-EESEEEEEEEEE
T ss_pred CCCCEEEEEeCCCCeecCcccCCCCCEEEEEEEE
Confidence 89999999999 999999988 3 368888887
No 64
>PRK11171 hypothetical protein; Provisional
Probab=50.62 E-value=23 Score=34.11 Aligned_cols=36 Identities=6% Similarity=-0.039 Sum_probs=28.6
Q ss_pred EEEEEcCCCEEEeCCCceEEEEecCceEEEEeccCC
Q 015736 358 FDCILDEGEMLYIPPKWWHYVRSLSISFSVSFWWSD 393 (401)
Q Consensus 358 ~e~iL~pGD~LyIP~gWwH~V~sl~~siSVs~wf~~ 393 (401)
-+..|++||+|++|++=-|...|.+..-..=+++++
T Consensus 223 ~~~~l~~GD~i~~~~~~~h~~~N~g~~~~~yl~~k~ 258 (266)
T PRK11171 223 DWVEVEAGDFIWMRAYCPQACYAGGPGPFRYLLYKD 258 (266)
T ss_pred EEEEeCCCCEEEECCCCCEEEECCCCCcEEEEEEcc
Confidence 456899999999999999999998765555455544
No 65
>KOG3995 consensus 3-hydroxyanthranilate oxygenase HAAO [Amino acid transport and metabolism]
Probab=48.61 E-value=50 Score=30.80 Aligned_cols=68 Identities=15% Similarity=0.344 Sum_probs=52.4
Q ss_pred eeeccCCCCCccccccCCceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEEEEcC
Q 015736 285 AWFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDE 364 (401)
Q Consensus 285 ~W~Gp~gt~splH~D~~~n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~p 364 (401)
+++|.+++.+..|..+..-|+-|..|.-...++.-. ...+.+.+.
T Consensus 37 m~VGGPN~RkdyHieegeE~FyQ~KGdMvLKVie~g-----------------------------------~~rDivI~q 81 (279)
T KOG3995|consen 37 MFVGGPNTRKDYHIEEGEEVFYQLKGDMVLKVLEQG-----------------------------------KHRDVVIRQ 81 (279)
T ss_pred EEecCCCcccccccCCcchhheeecCceEEeeeccC-----------------------------------cceeeEEec
Confidence 567999999999999999999999997655543322 223788999
Q ss_pred CCEEEeCCCceEEEEecCceEEE
Q 015736 365 GEMLYIPPKWWHYVRSLSISFSV 387 (401)
Q Consensus 365 GD~LyIP~gWwH~V~sl~~siSV 387 (401)
||+..+|..--|.-.-...++.+
T Consensus 82 Ge~flLParVpHSPqRFantvGl 104 (279)
T KOG3995|consen 82 GEIFLLPARVPHSPQRFANTVGL 104 (279)
T ss_pred CcEEEeccCCCCChhhhccceeE
Confidence 99999999999887665555443
No 66
>PRK10296 DNA-binding transcriptional regulator ChbR; Provisional
Probab=48.30 E-value=74 Score=30.21 Aligned_cols=22 Identities=23% Similarity=0.451 Sum_probs=19.3
Q ss_pred EEEEcCCCEEEeCCCceEEEEe
Q 015736 359 DCILDEGEMLYIPPKWWHYVRS 380 (401)
Q Consensus 359 e~iL~pGD~LyIP~gWwH~V~s 380 (401)
...+.|||+++||+|=.|....
T Consensus 62 ~~~l~~g~l~~i~p~~~H~~~~ 83 (278)
T PRK10296 62 RVLLERGDFVFIPLGSHHQSFY 83 (278)
T ss_pred EEEECCCcEEEeCCCCccceee
Confidence 5689999999999999998754
No 67
>COG3435 Gentisate 1,2-dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=46.47 E-value=66 Score=31.74 Aligned_cols=71 Identities=20% Similarity=0.258 Sum_probs=50.9
Q ss_pred ccccceee--ccCCCCCccccccCCceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCce
Q 015736 280 LRSLNAWF--GPAGTVTPLHHDPHHNILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEF 357 (401)
Q Consensus 280 ~~~~~~W~--Gp~gt~splH~D~~~n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~ 357 (401)
+..+-+|| =|+|-.+..|......++.++.|+-+.++= -
T Consensus 258 mptI~a~mqlL~~Gf~~~~~r~t~s~iy~V~eGsg~~~Ig---------------------------------------~ 298 (351)
T COG3435 258 MPTIGAFMQLLPPGFHGKAHRHTDSTIYHVVEGSGYTIIG---------------------------------------G 298 (351)
T ss_pred CchHHHHHHhcCCcccCCceeccCCEEEEEEecceeEEEC---------------------------------------C
Confidence 34455665 478888888888878889999997766540 0
Q ss_pred EEEEEcCCCEEEeCCCceEEEEec-CceEEEEe
Q 015736 358 FDCILDEGEMLYIPPKWWHYVRSL-SISFSVSF 389 (401)
Q Consensus 358 ~e~iL~pGD~LyIP~gWwH~V~sl-~~siSVs~ 389 (401)
....-++||+..||+.-||...|. ++++-+||
T Consensus 299 ~rf~~~~~D~fvVPsW~~~~~~~gs~da~LFsf 331 (351)
T COG3435 299 ERFDWSAGDIFVVPSWAWHEHVNGSEDAVLFSF 331 (351)
T ss_pred EEeeccCCCEEEccCcceeecccCCcceEEEec
Confidence 124467999999999999999984 44554443
No 68
>TIGR00218 manA mannose-6-phosphate isomerase, class I. The names phosphomannose isomerase and mannose-6-phosphate isomerase are synonomous. This family contains two rather deeply branched groups. One group contains an experimentally determined phosphomannose isomerase of Streptococcus mutans as well as three uncharacterized paralogous proteins of Bacillus subtilis, all at more than 50 % identity to each other, plus a more distant homolog from Archaeoglobus fulgidus. The other group contains members from E. coli, budding yeast, Borrelia burgdorferi, etc.
Probab=45.28 E-value=11 Score=36.91 Aligned_cols=21 Identities=24% Similarity=0.355 Sum_probs=18.7
Q ss_pred EEEEEcCCCEEEeCCCceEEE
Q 015736 358 FDCILDEGEMLYIPPKWWHYV 378 (401)
Q Consensus 358 ~e~iL~pGD~LyIP~gWwH~V 378 (401)
..+.++|||++|||+|--|.-
T Consensus 151 n~v~v~~Gd~i~ipaGt~HA~ 171 (302)
T TIGR00218 151 NRIKLKPGDFFYVPSGTPHAY 171 (302)
T ss_pred cccccCCCCEEEeCCCCcccc
Confidence 457799999999999999984
No 69
>COG5553 Predicted metal-dependent enzyme of the double-stranded beta helix superfamily [General function prediction only]
Probab=44.79 E-value=47 Score=29.73 Aligned_cols=25 Identities=16% Similarity=0.268 Sum_probs=19.2
Q ss_pred cCCCCCccccccCCceeEEEeeeeE
Q 015736 289 PAGTVTPLHHDPHHNILAQVVGKKY 313 (401)
Q Consensus 289 p~gt~splH~D~~~n~l~qV~G~K~ 313 (401)
.+|+.+|.|-.-...+..++.|..+
T Consensus 81 ~PG~~~p~HnH~~wglVgil~G~E~ 105 (191)
T COG5553 81 SPGVQYPPHNHLMWGLVGILWGGET 105 (191)
T ss_pred CCCcccCCcccchheeeeeeecccc
Confidence 4688899997777788888888543
No 70
>COG1482 ManA Phosphomannose isomerase [Carbohydrate transport and metabolism]
Probab=44.48 E-value=17 Score=36.01 Aligned_cols=24 Identities=21% Similarity=0.174 Sum_probs=20.6
Q ss_pred EEEEEcCCCEEEeCCCceEEEEec
Q 015736 358 FDCILDEGEMLYIPPKWWHYVRSL 381 (401)
Q Consensus 358 ~e~iL~pGD~LyIP~gWwH~V~sl 381 (401)
-.+.|+|||.+|+|+|--|....-
T Consensus 158 n~v~lkpGe~~fl~Agt~HA~~~G 181 (312)
T COG1482 158 NRVKLKPGEAFFLPAGTPHAYLKG 181 (312)
T ss_pred cEEecCCCCEEEecCCCceeeccc
Confidence 357899999999999999987643
No 71
>COG3435 Gentisate 1,2-dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=44.47 E-value=42 Score=33.09 Aligned_cols=55 Identities=20% Similarity=0.320 Sum_probs=42.5
Q ss_pred CCCCCccccccCCceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEEEEcCCCEEE
Q 015736 290 AGTVTPLHHDPHHNILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDEGEMLY 369 (401)
Q Consensus 290 ~gt~splH~D~~~n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~pGD~Ly 369 (401)
+|-++|-|......+-..|.|+--|..+.- -...+++||.|.
T Consensus 101 PGEvApsHrHsqsAlRFvveG~Ga~T~VdG--------------------------------------er~~M~~GDfil 142 (351)
T COG3435 101 PGEVAPSHRHNQSALRFVVEGKGAYTVVDG--------------------------------------ERTPMEAGDFIL 142 (351)
T ss_pred CcccCCcccccccceEEEEeccceeEeecC--------------------------------------ceeeccCCCEEE
Confidence 688889999888888888888765553211 135689999999
Q ss_pred eCCCceEEEEecC
Q 015736 370 IPPKWWHYVRSLS 382 (401)
Q Consensus 370 IP~gWwH~V~sl~ 382 (401)
.|.+-||.--|.+
T Consensus 143 TP~w~wHdHgn~g 155 (351)
T COG3435 143 TPAWTWHDHGNEG 155 (351)
T ss_pred ccCceeccCCCCC
Confidence 9999999877654
No 72
>PRK15460 cpsB mannose-1-phosphate guanyltransferase; Provisional
Probab=43.87 E-value=32 Score=36.25 Aligned_cols=30 Identities=23% Similarity=0.088 Sum_probs=25.4
Q ss_pred EEEEEcCCCEEEeCCCceEEEEecCceEEE
Q 015736 358 FDCILDEGEMLYIPPKWWHYVRSLSISFSV 387 (401)
Q Consensus 358 ~e~iL~pGD~LyIP~gWwH~V~sl~~siSV 387 (401)
.+..|+|||.+|||+|=-|..+|.++.-.+
T Consensus 424 ~~~~L~~GDSi~ip~g~~H~~~N~g~~~l~ 453 (478)
T PRK15460 424 DIKLLGENESIYIPLGATHCLENPGKIPLD 453 (478)
T ss_pred EEEEecCCCEEEECCCCcEEEEcCCCCCEE
Confidence 367899999999999999999998764333
No 73
>TIGR03027 pepcterm_export putative polysaccharide export protein, PEP-CTERM sytem-associated. This protein family belongs to the larger set of polysaccharide biosynthesis/export proteins described by Pfam model pfam02563. Members of this family are variable in either containing of lacking a 78-residue insert, but appear to fall within a single clade, nevertheless, where the regions in which the gene is found encode components of the PEP-CTERM/EpsH proposed exosortase protein sorting system.
Probab=42.24 E-value=16 Score=32.48 Aligned_cols=17 Identities=35% Similarity=0.915 Sum_probs=14.3
Q ss_pred EEEEcCCCEEEeCCCce
Q 015736 359 DCILDEGEMLYIPPKWW 375 (401)
Q Consensus 359 e~iL~pGD~LyIP~gWw 375 (401)
...|+|||++|||..++
T Consensus 149 n~~L~~gD~I~Vp~~~f 165 (165)
T TIGR03027 149 NVELKPGDVLIIPESWF 165 (165)
T ss_pred CceeCCCCEEEEecccC
Confidence 36699999999998764
No 74
>PLN02288 mannose-6-phosphate isomerase
Probab=41.55 E-value=17 Score=37.22 Aligned_cols=23 Identities=30% Similarity=0.215 Sum_probs=19.7
Q ss_pred EEEEEcCCCEEEeCCCceEEEEe
Q 015736 358 FDCILDEGEMLYIPPKWWHYVRS 380 (401)
Q Consensus 358 ~e~iL~pGD~LyIP~gWwH~V~s 380 (401)
-.+.|+|||.+|+|+|--|.-.+
T Consensus 251 N~v~L~PGeaifl~ag~~HAYl~ 273 (394)
T PLN02288 251 NYVKLNPGEALYLGANEPHAYLS 273 (394)
T ss_pred ceEecCCCCEEEecCCCCceecC
Confidence 35789999999999999998543
No 75
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=41.29 E-value=37 Score=32.07 Aligned_cols=39 Identities=18% Similarity=0.311 Sum_probs=32.6
Q ss_pred EEEEEcCCCEEEeCCCceEEEEecCc--eEEEEeccCCCCC
Q 015736 358 FDCILDEGEMLYIPPKWWHYVRSLSI--SFSVSFWWSDGGS 396 (401)
Q Consensus 358 ~e~iL~pGD~LyIP~gWwH~V~sl~~--siSVs~wf~~~~~ 396 (401)
..+.+.+|++|+.|+.-+|.|...+. =+++.+|..+-..
T Consensus 141 ~~Vkp~aG~~vlfps~~lH~v~pVt~G~R~~~~~Wi~S~v~ 181 (226)
T PRK05467 141 HRVKLPAGDLVLYPSTSLHRVTPVTRGVRVASFFWIQSLVR 181 (226)
T ss_pred EEEecCCCeEEEECCCCceeeeeccCccEEEEEecHHHHcC
Confidence 46789999999999999999998754 6888999876543
No 76
>PRK13501 transcriptional activator RhaR; Provisional
Probab=41.09 E-value=31 Score=33.21 Aligned_cols=26 Identities=19% Similarity=0.231 Sum_probs=22.2
Q ss_pred EEEEEcCCCEEEeCCCceEEEEecCc
Q 015736 358 FDCILDEGEMLYIPPKWWHYVRSLSI 383 (401)
Q Consensus 358 ~e~iL~pGD~LyIP~gWwH~V~sl~~ 383 (401)
....+++||+++||+|=.|.+.+.++
T Consensus 56 ~~~~l~~g~~~~I~p~~~H~~~~~~~ 81 (290)
T PRK13501 56 HPYRITCGDVFYIQAADHHSYESVHD 81 (290)
T ss_pred eeeeecCCeEEEEcCCCcccccccCC
Confidence 35779999999999999999887654
No 77
>PF12852 Cupin_6: Cupin
Probab=38.48 E-value=28 Score=31.15 Aligned_cols=25 Identities=20% Similarity=0.251 Sum_probs=21.2
Q ss_pred EEEEcCCCEEEeCCCceEEEEecCc
Q 015736 359 DCILDEGEMLYIPPKWWHYVRSLSI 383 (401)
Q Consensus 359 e~iL~pGD~LyIP~gWwH~V~sl~~ 383 (401)
...|++||++++|.|--|...+-..
T Consensus 56 ~~~L~~GDivllp~g~~H~l~~~~~ 80 (186)
T PF12852_consen 56 PIRLEAGDIVLLPRGTAHVLSSDPD 80 (186)
T ss_pred eEEecCCCEEEEcCCCCeEeCCCCC
Confidence 3679999999999999999976543
No 78
>COG4297 Uncharacterized protein containing double-stranded beta helix domain [Function unknown]
Probab=36.39 E-value=1.1e+02 Score=26.72 Aligned_cols=30 Identities=30% Similarity=0.357 Sum_probs=23.6
Q ss_pred EEEEEcCCCEEEeCCCceEEEEecCceEEE
Q 015736 358 FDCILDEGEMLYIPPKWWHYVRSLSISFSV 387 (401)
Q Consensus 358 ~e~iL~pGD~LyIP~gWwH~V~sl~~siSV 387 (401)
.+..+..||+|.||.|-=|.-..-+.-|.|
T Consensus 85 ~el~v~~GDvlliPAGvGH~rl~sS~DF~V 114 (163)
T COG4297 85 QELEVGEGDVLLIPAGVGHCRLHSSADFQV 114 (163)
T ss_pred ceeeecCCCEEEEecCcccccccCCCCeEE
Confidence 467789999999999999987665555544
No 79
>PF15138 Syncollin: Syncollin
Probab=35.47 E-value=39 Score=27.92 Aligned_cols=39 Identities=21% Similarity=0.494 Sum_probs=29.2
Q ss_pred eEEEEEcCCC-EEEeCCCceEEEEecC--ceEEEEeccCCCC
Q 015736 357 FFDCILDEGE-MLYIPPKWWHYVRSLS--ISFSVSFWWSDGG 395 (401)
Q Consensus 357 ~~e~iL~pGD-~LyIP~gWwH~V~sl~--~siSVs~wf~~~~ 395 (401)
.-+..++||| +=|+|.+|=|.+.||- .-..++.|=...-
T Consensus 34 G~~l~v~pg~DlPylPs~w~n~iSSlvV~~RCeLtVWS~~gK 75 (112)
T PF15138_consen 34 GAELSVEPGDDLPYLPSGWANKISSLVVAPRCELTVWSRSGK 75 (112)
T ss_pred CcEEeecCCCCCCcCCccccCeeeeEEEcCceEEEEEeccCC
Confidence 3456789996 5599999999999984 4677777765543
No 80
>COG3822 ABC-type sugar transport system, auxiliary component [General function prediction only]
Probab=35.21 E-value=1.3e+02 Score=27.82 Aligned_cols=27 Identities=22% Similarity=0.247 Sum_probs=23.0
Q ss_pred eEEEEEcCCCEEEeCCCceEEEEecCc
Q 015736 357 FFDCILDEGEMLYIPPKWWHYVRSLSI 383 (401)
Q Consensus 357 ~~e~iL~pGD~LyIP~gWwH~V~sl~~ 383 (401)
.-...|+||+-+-+|||-||..-..+.
T Consensus 152 g~~lkL~PGesitL~Pg~~HsFwae~g 178 (225)
T COG3822 152 GSQLKLSPGESITLPPGLYHSFWAEEG 178 (225)
T ss_pred ceeEEECCCCcEecCCCceeeeeecCC
Confidence 356789999999999999999877654
No 81
>TIGR02297 HpaA 4-hydroxyphenylacetate catabolism regulatory protein HpaA. This putative transcriptional regulator, which contains both the substrate-binding, dimerization domain (pfam02311) and the helix-turn-helix DNA-binding domain (pfam00165) of the AraC famil, is located proximal to genes of the 4-hydroxyphenylacetate catabolism pathway.
Probab=34.37 E-value=85 Score=29.84 Aligned_cols=24 Identities=13% Similarity=-0.047 Sum_probs=20.5
Q ss_pred EEEEcCCCEEEeCCCceEEEEecC
Q 015736 359 DCILDEGEMLYIPPKWWHYVRSLS 382 (401)
Q Consensus 359 e~iL~pGD~LyIP~gWwH~V~sl~ 382 (401)
...+++||+++||++-.|.+...+
T Consensus 63 ~~~l~~g~~~ii~~~~~H~~~~~~ 86 (287)
T TIGR02297 63 EYSEYAPCFFLTPPSVPHGFVTDL 86 (287)
T ss_pred EEEecCCeEEEeCCCCccccccCC
Confidence 467999999999999999987654
No 82
>PRK13500 transcriptional activator RhaR; Provisional
Probab=33.68 E-value=52 Score=32.20 Aligned_cols=26 Identities=19% Similarity=0.217 Sum_probs=22.3
Q ss_pred EEEEEcCCCEEEeCCCceEEEEecCc
Q 015736 358 FDCILDEGEMLYIPPKWWHYVRSLSI 383 (401)
Q Consensus 358 ~e~iL~pGD~LyIP~gWwH~V~sl~~ 383 (401)
....+.+||+++||++=.|...+.++
T Consensus 86 ~~~~l~~Gdl~~I~~~~~H~~~~~~~ 111 (312)
T PRK13500 86 RPYRITRGDLFYIHADDKHSYASVND 111 (312)
T ss_pred EEEeecCCeEEEECCCCeecccccCC
Confidence 45789999999999999999887554
No 83
>PRK10371 DNA-binding transcriptional regulator MelR; Provisional
Probab=32.25 E-value=1.1e+02 Score=29.84 Aligned_cols=61 Identities=10% Similarity=0.032 Sum_probs=42.7
Q ss_pred ceeeccCCCCCccccccCCceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEEEEc
Q 015736 284 NAWFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILD 363 (401)
Q Consensus 284 ~~W~Gp~gt~splH~D~~~n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~ 363 (401)
.+-.-+..+..++|....--++.++.|.=.+.. ...+.++.
T Consensus 29 ~~~~~~~~~m~~~HwH~e~Ei~yv~~G~~~~~i---------------------------------------~g~~~~l~ 69 (302)
T PRK10371 29 EIEFRPPHIMPTSHWHGQVEVNVPFDGDVEYLI---------------------------------------NNEKVQIN 69 (302)
T ss_pred EEEeeCCCCCCCCCccccEEEEEecCCcEEEEE---------------------------------------CCEEEEEc
Confidence 344456666678888776667777788533332 11367899
Q ss_pred CCCEEEeCCCceEEEEecCc
Q 015736 364 EGEMLYIPPKWWHYVRSLSI 383 (401)
Q Consensus 364 pGD~LyIP~gWwH~V~sl~~ 383 (401)
|||+++||++=-|.....+.
T Consensus 70 ~Gd~ili~s~~~H~~~~~~~ 89 (302)
T PRK10371 70 QGHITLFWACTPHQLTDPGN 89 (302)
T ss_pred CCcEEEEecCCcccccccCC
Confidence 99999999999998876554
No 84
>PF12973 Cupin_7: ChrR Cupin-like domain; PDB: 3O14_B 2Z2S_F 2Q1Z_B 3EBR_A.
Probab=31.66 E-value=63 Score=25.41 Aligned_cols=25 Identities=28% Similarity=0.288 Sum_probs=20.6
Q ss_pred EEcCCCEEEeCCCceEEEEecCceE
Q 015736 361 ILDEGEMLYIPPKWWHYVRSLSISF 385 (401)
Q Consensus 361 iL~pGD~LyIP~gWwH~V~sl~~si 385 (401)
...+||.++.|+|--|...+.+.++
T Consensus 61 ~~~~G~~~~~p~g~~h~~~s~~gc~ 85 (91)
T PF12973_consen 61 RYGAGDWLRLPPGSSHTPRSDEGCL 85 (91)
T ss_dssp EEETTEEEEE-TTEEEEEEESSCEE
T ss_pred cCCCCeEEEeCCCCccccCcCCCEE
Confidence 4599999999999999999876643
No 85
>TIGR03028 EpsE polysaccharide export protein EpsE. Sequences in this family of proteins are members of a polysaccharide export protein family (pfam02563) which includes the wza protein from E.coli. This family of proteins are homologous to the EpsE protein of the methanolan biosynthesis operon of Methylobacillus species strain 12S. The distribution of this protein appears to be restricted to a subset of exopolysaccharide operons containing a syntenic grouping of genes including a variant of the EpsH exosortase protein. Exosortase has been proposed to be involved in the targetting and processing of proteins containing the PEP-CTERM domain to the exopolysaccharide layer.
Probab=29.63 E-value=28 Score=32.88 Aligned_cols=15 Identities=7% Similarity=0.550 Sum_probs=13.4
Q ss_pred EEcCCCEEEeCCCce
Q 015736 361 ILDEGEMLYIPPKWW 375 (401)
Q Consensus 361 iL~pGD~LyIP~gWw 375 (401)
.|+|||++|||..|+
T Consensus 225 ~l~~gDii~V~~s~~ 239 (239)
T TIGR03028 225 LVQPDDVIYVRESLF 239 (239)
T ss_pred ccCCCCEEEEeCccC
Confidence 499999999999885
No 86
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=29.12 E-value=67 Score=28.43 Aligned_cols=36 Identities=17% Similarity=0.376 Sum_probs=29.9
Q ss_pred eEEEEEcCCCEEEeCCC---ceEEEEecC--ceEEEEeccC
Q 015736 357 FFDCILDEGEMLYIPPK---WWHYVRSLS--ISFSVSFWWS 392 (401)
Q Consensus 357 ~~e~iL~pGD~LyIP~g---WwH~V~sl~--~siSVs~wf~ 392 (401)
...+.-++|++|+.|.+ .+|.|.... .-.+++.|++
T Consensus 138 ~~~v~P~~G~~v~f~~~~~~~~H~v~pv~~G~r~~~~~W~~ 178 (178)
T smart00702 138 CATVKPKKGDLLFFPSGRGRSLHGVCPVTRGSRWAITGWIR 178 (178)
T ss_pred ceEEeCCCCcEEEEeCCCCCccccCCcceeCCEEEEEEEEC
Confidence 45677789999999985 999998765 5789999984
No 87
>PF07385 DUF1498: Protein of unknown function (DUF1498); InterPro: IPR010864 This family consists of several hypothetical bacterial proteins of around 225 residues in length. The function of this family is unknown.; PDB: 3MPB_B 3KMH_A.
Probab=28.00 E-value=1e+02 Score=29.01 Aligned_cols=86 Identities=24% Similarity=0.373 Sum_probs=44.9
Q ss_pred eeeccCCCCCccccccC--CceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCccc--ccCCCCCCCceEEE
Q 015736 285 AWFGPAGTVTPLHHDPH--HNILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDE--TKFPKVRDLEFFDC 360 (401)
Q Consensus 285 ~W~Gp~gt~splH~D~~--~n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~--~~fP~~~~a~~~e~ 360 (401)
+-+...|-.||+|+... ..+..---|.=.+.||-......+-. .+.|.+ ..|- ..+| ..-..
T Consensus 91 im~~~~~Q~tP~H~H~~K~EDIINRGGG~L~i~l~~s~~~~~~~~--------~~~v~V-~~DG~~~t~~-----aG~~l 156 (225)
T PF07385_consen 91 IMIVREGQVTPMHFHWKKMEDIINRGGGNLVIELYNSDPDGELDA--------DTDVTV-PVDGIRRTVP-----AGTQL 156 (225)
T ss_dssp EEEE-BT-EEEEEEESS--EEEEEEEES-EEEEEEEB--TTSSB---------SS-EEE-EETTEEEEE------TT-EE
T ss_pred heeccCCCcCCcccCcchhhheeecCCceEEEEEEeccCCCcccc--------CCCeEE-ecCCcEEEec-----CCceE
Confidence 45677888999999875 34554444566677776654222211 111111 0111 1122 23578
Q ss_pred EEcCCCEEEeCCCceEEEEecCce
Q 015736 361 ILDEGEMLYIPPKWWHYVRSLSIS 384 (401)
Q Consensus 361 iL~pGD~LyIP~gWwH~V~sl~~s 384 (401)
+|.||+-+=||+|-||........
T Consensus 157 ~L~PGESiTL~Pg~yH~Fw~e~g~ 180 (225)
T PF07385_consen 157 RLNPGESITLPPGIYHWFWGEGGD 180 (225)
T ss_dssp EE-TT-EEEE-TTEEEEEEE-TTS
T ss_pred EeCCCCeEeeCCCCeeeEEecCCC
Confidence 999999999999999998887644
No 88
>PF12854 PPR_1: PPR repeat
Probab=27.68 E-value=77 Score=20.10 Aligned_cols=26 Identities=23% Similarity=0.339 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHhhccCCcHHHHHHHHH
Q 015736 67 DAYSMACLHGAKYHYRNGEFKEALRVLD 94 (401)
Q Consensus 67 ~~y~~~~l~~~~~~~~~~~~~~~~~~ld 94 (401)
+.+|+.+|.. .+++.|++++|.+.+|
T Consensus 6 d~~ty~~lI~--~~Ck~G~~~~A~~l~~ 31 (34)
T PF12854_consen 6 DVVTYNTLID--GYCKAGRVDEAFELFD 31 (34)
T ss_pred cHhHHHHHHH--HHHHCCCHHHHHHHHH
Confidence 5677777744 3456889999999886
No 89
>PF11699 CENP-C_C: Mif2/CENP-C like; PDB: 2VPV_B.
Probab=24.88 E-value=1.4e+02 Score=23.73 Aligned_cols=26 Identities=8% Similarity=0.295 Sum_probs=19.3
Q ss_pred EEEEcCCCEEEeCCCceEEEEecCce
Q 015736 359 DCILDEGEMLYIPPKWWHYVRSLSIS 384 (401)
Q Consensus 359 e~iL~pGD~LyIP~gWwH~V~sl~~s 384 (401)
+.++.+|++.+||+|=--..+|+...
T Consensus 52 ~f~v~~G~~F~VP~gN~Y~i~N~~~~ 77 (85)
T PF11699_consen 52 SFVVTKGGSFQVPRGNYYSIKNIGNE 77 (85)
T ss_dssp EEEEETT-EEEE-TT-EEEEEE-SSS
T ss_pred EEEEeCCCEEEECCCCEEEEEECCCC
Confidence 57899999999999999999998753
No 90
>PF01238 PMI_typeI: Phosphomannose isomerase type I; InterPro: IPR001250 Mannose-6-phosphate isomerase or phosphomannose isomerase (5.3.1.8 from EC) (PMI) is the enzyme that catalyses the interconversion of mannose-6-phosphate and fructose-6-phosphate. In eukaryotes PMI is involved in the synthesis of GDP-mannose, a constituent of N- and O-linked glycans and GPI anchors and in prokaryotes it participates in a variety of pathways, including capsular polysaccharide biosynthesis and D-mannose metabolism. PMI's belong to the cupin superfamily whose functions range from isomerase and epimerase activities involved in the modification of cell wall carbohydrates in bacteria and plants, to non-enzymatic storage proteins in plant seeds, and transcription factors linked to congenital baldness in mammals []. Three classes of PMI have been defined []. Type I includes eukaryotic PMI and the enzyme encoded by the manA gene in enterobacteria. PMI has a bound zinc ion, which is essential for activity. A crystal structure of PMI from Candida albicans shows that the enzyme has three distinct domains []. The active site lies in the central domain, contains a single essential zinc atom, and forms a deep, open cavity of suitable dimensions to contain M6P or F6P The central domain is flanked by a helical domain on one side and a jelly-roll like domain on the other.; GO: 0004476 mannose-6-phosphate isomerase activity, 0008270 zinc ion binding, 0005975 carbohydrate metabolic process; PDB: 1PMI_A 1QWR_B 1ZX5_A 3H1Y_A 2WFP_A 3H1M_A 3H1W_A.
Probab=22.76 E-value=55 Score=33.26 Aligned_cols=23 Identities=26% Similarity=0.237 Sum_probs=18.4
Q ss_pred EEEEEcCCCEEEeCCCceEEEEe
Q 015736 358 FDCILDEGEMLYIPPKWWHYVRS 380 (401)
Q Consensus 358 ~e~iL~pGD~LyIP~gWwH~V~s 380 (401)
-.+.|+|||.+|+|+|=-|...+
T Consensus 250 N~v~L~pGeaifl~a~~~HAYl~ 272 (373)
T PF01238_consen 250 NYVELQPGEAIFLPAGEPHAYLS 272 (373)
T ss_dssp EEEEE-TT-EEEEHTTHHEEEEE
T ss_pred EEEEecCCceEEecCCCcccccc
Confidence 45789999999999999998776
No 91
>PRK12335 tellurite resistance protein TehB; Provisional
Probab=21.55 E-value=4.2e+02 Score=25.47 Aligned_cols=59 Identities=17% Similarity=0.167 Sum_probs=38.6
Q ss_pred CceeEEEeeeeEEEEecCCCCCccccCcccccCCCCcccCCCcccccCCCCCCCceEEEEEcCCCEEEeCCCceEEEEec
Q 015736 302 HNILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDEGEMLYIPPKWWHYVRSL 381 (401)
Q Consensus 302 ~n~l~qV~G~K~~~L~pP~~~~~Lyp~~~~~~~ntS~vD~~~~d~~~fP~~~~a~~~e~iL~pGD~LyIP~gWwH~V~sl 381 (401)
.-.+..++|+=.++.+.++.. ....+.....++.-+||++=||.+..+
T Consensus 34 ~~~~~vl~G~l~~~~~de~g~--------------------------------~~~~~~l~~~~~~~~i~p~~wh~v~~~ 81 (287)
T PRK12335 34 WAKLTVLKGELKFYELTEDGE--------------------------------ELSEHIFDAENQPPFIEPQAWHRIEAA 81 (287)
T ss_pred ceEEEEEeeeEEEEEECCCCC--------------------------------eeeEEEEecCCCCceeCCcceEEEEEc
Confidence 467889999988888755421 011223334455667999999999999
Q ss_pred Cc--eEEEEeccC
Q 015736 382 SI--SFSVSFWWS 392 (401)
Q Consensus 382 ~~--siSVs~wf~ 392 (401)
++ .+.+.|.-.
T Consensus 82 s~d~~~~l~fy~~ 94 (287)
T PRK12335 82 SDDLECQLSFYCK 94 (287)
T ss_pred CCCcEEEEEEEEc
Confidence 65 555555543
Done!