Query 015737
Match_columns 401
No_of_seqs 137 out of 1421
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 17:48:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015737.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015737hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kp8_A Groel protein; chaperon 100.0 3.8E-81 1.3E-85 653.9 36.5 354 30-385 1-402 (547)
2 1iok_A Chaperonin 60; chaperon 100.0 2.2E-81 7.5E-86 655.9 31.3 354 30-385 2-403 (545)
3 1we3_A CPN60(groel); chaperoni 100.0 1.2E-80 4.2E-85 650.4 35.5 353 30-385 1-401 (543)
4 3rtk_A 60 kDa chaperonin 2; he 100.0 1.7E-81 5.9E-86 655.3 28.1 353 30-385 1-401 (546)
5 1q3q_A Thermosome alpha subuni 100.0 8.3E-69 2.9E-73 562.5 33.7 325 31-385 15-398 (548)
6 3ko1_A Chaperonin; 9-fold symm 100.0 1.2E-68 4.3E-73 561.1 34.4 325 31-385 22-405 (553)
7 1a6d_B Thermosome (beta subuni 100.0 1.4E-68 4.7E-73 560.6 34.0 325 31-385 13-396 (543)
8 3p9d_A T-complex protein 1 sub 100.0 3.5E-69 1.2E-73 566.2 29.0 330 31-385 16-409 (559)
9 1a6d_A Thermosome (alpha subun 100.0 1.3E-68 4.5E-73 560.7 32.7 324 31-385 14-395 (545)
10 3ruv_A Chaperonin, CPN; double 100.0 2.6E-68 8.8E-73 558.3 33.4 325 31-385 11-391 (543)
11 3p9d_D T-complex protein 1 sub 100.0 6E-69 2E-73 561.4 28.1 326 31-385 11-401 (528)
12 3iyg_B T-complex protein 1 sub 100.0 8.9E-68 3.1E-72 551.0 35.1 322 32-384 3-383 (513)
13 3iyg_H T-complex protein 1 sub 100.0 8.2E-68 2.8E-72 551.3 34.4 320 40-384 10-386 (515)
14 3iyg_A T-complex protein 1 sub 100.0 5.3E-67 1.8E-71 547.0 33.5 339 33-396 4-415 (529)
15 3iyg_G T-complex protein 1 sub 100.0 2.1E-66 7.2E-71 540.9 34.8 317 40-384 8-385 (515)
16 3iyg_E T-complex protein 1 sub 100.0 2E-66 6.9E-71 541.3 34.2 323 32-384 3-386 (515)
17 3iyg_D T-complex protein 1 sub 100.0 2.6E-66 8.9E-71 540.6 33.8 321 33-384 5-390 (518)
18 3p9d_G T-complex protein 1 sub 100.0 2E-67 6.7E-72 552.1 22.8 327 31-385 16-400 (550)
19 3p9d_E T-complex protein 1 sub 100.0 5E-66 1.7E-70 542.7 29.1 330 32-385 38-430 (562)
20 3iyg_Q T-complex protein 1 sub 100.0 2.1E-65 7.1E-70 533.3 33.1 315 40-384 10-382 (512)
21 3p9d_B T-complex protein 1 sub 100.0 9.7E-67 3.3E-71 545.0 22.3 324 31-385 9-391 (527)
22 3p9d_H T-complex protein 1 sub 100.0 3.7E-65 1.3E-69 536.6 30.1 336 18-385 5-408 (568)
23 3p9d_C T-complex protein 1 sub 100.0 1.4E-65 4.8E-70 540.2 23.8 324 31-384 11-458 (590)
24 3iyg_Z T-complex protein 1 sub 100.0 1.6E-64 5.4E-69 526.8 31.5 316 40-384 9-389 (517)
25 3p9d_F T-complex protein 1 sub 100.0 1.7E-64 5.8E-69 529.9 22.4 324 32-385 10-402 (546)
26 3aq1_B Thermosome subunit; gro 100.0 2.5E-58 8.6E-63 478.5 25.8 289 69-385 1-349 (500)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 4.1E-40 1.4E-44 295.0 14.2 171 216-386 2-172 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 4.2E-39 1.4E-43 289.1 14.7 168 219-386 12-179 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 1E-36 3.5E-41 261.3 13.4 144 221-364 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.9 5.4E-23 1.8E-27 185.8 13.1 134 212-369 1-174 (178)
31 1ass_A Thermosome; chaperonin, 99.8 8.2E-20 2.8E-24 161.9 14.4 126 219-367 1-153 (159)
32 1s3l_A Hypothetical protein MJ 31.7 1.2E+02 0.0041 26.0 7.2 69 239-315 17-87 (190)
33 3aon_B V-type sodium ATPase su 31.3 67 0.0023 25.8 5.0 75 255-331 26-104 (115)
34 2ln3_A De novo designed protei 31.3 1.5E+02 0.005 21.4 6.2 52 258-332 11-62 (83)
35 2d00_A V-type ATP synthase sub 29.4 1.8E+02 0.0061 22.9 7.2 73 256-329 28-107 (109)
36 2q8p_A Iron-regulated surface 26.4 60 0.0021 28.9 4.4 17 266-282 53-69 (260)
37 3md9_A Hemin-binding periplasm 25.7 1E+02 0.0035 27.3 5.8 58 266-328 52-111 (255)
38 2ooa_A E3 ubiquitin-protein li 25.6 79 0.0027 21.9 3.7 36 131-166 13-51 (52)
39 2r7a_A Bacterial heme binding 24.1 1.1E+02 0.0037 27.1 5.7 58 266-328 52-112 (256)
40 2cos_A Serine/threonine protei 22.7 1.2E+02 0.0041 21.1 4.2 34 134-167 14-51 (54)
41 2lnd_A De novo designed protei 21.2 1.4E+02 0.0047 22.7 4.6 35 257-291 35-69 (112)
No 1
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=3.8e-81 Score=653.90 Aligned_cols=354 Identities=45% Similarity=0.763 Sum_probs=343.1
Q ss_pred cceeeecCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEEecchHHHhccccccCcccchHHHHHHHHHh
Q 015737 30 MVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGA 109 (401)
Q Consensus 30 ~~k~i~~g~~~~a~~~~~~~~~~la~~v~ttlGP~G~~kmI~~~~g~~~iTnDG~TIlk~i~~~hP~~~~gakll~~~a~ 109 (401)
++|+|.|| .++|+.|++||+.++++|+|||||+||||||++++|+|+|||||+||+|+|+++||+||+||||++++|+
T Consensus 1 ~~k~~~~g--~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~ 78 (547)
T 1kp8_A 1 AAKDVKFG--NDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVAS 78 (547)
T ss_dssp CCEEEEEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHH
T ss_pred CCcccccc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHH
Confidence 36999999 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCcchHHHHHHHHHHhhHHHHHcCCChhhHHHHHHHHHHHHHHHHhccccccchh-hhHhhhhhccCCchhHH
Q 015737 110 RTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVEDH-ELADVAAVSAGNDYTVG 188 (401)
Q Consensus 110 ~qd~~~GDGTTt~vvLa~~LL~~~~~li~~G~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~la 188 (401)
+||+++||||||++|||++||+++.+++++|+||+.|++||++|.+.++++|+++++|+++. +|.++|++|++++++++
T Consensus 79 ~qd~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~ 158 (547)
T 1kp8_A 79 KANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSDSKAIAQVGTISANSDETVG 158 (547)
T ss_dssp HHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHH
T ss_pred hhccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHhccchhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999876 89999999999999999
Q ss_pred HHHHHHHHhhccCCcEEeeCCCCccceeEEEeceEEeecccCcccccccccceeEeeCceEEEecccCCCHHHHHHHHHH
Q 015737 189 KMISDALQQVGRNGVVTIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKIKNPKDMFKILDS 268 (401)
Q Consensus 189 ~li~~Av~~v~~~g~I~i~~G~~~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~Ill~d~~I~~~~~i~~~le~ 268 (401)
++++||+.+++++|.|++++|++++||+++++|++|+++|.||||++++++|+++++||+|+++|++|++++++++++|+
T Consensus 159 ~liadAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~ 238 (547)
T 1kp8_A 159 KLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEA 238 (547)
T ss_dssp HHHHHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHH
T ss_pred HHHHHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCEEEEecCcchHHHHHHHHhcccCcceEEEEecCCccccccccHHHHHHHhCCeEEecCCCCcccCCCCCCcee
Q 015737 269 AVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGT 348 (401)
Q Consensus 269 i~~~g~~lvIi~~~I~~~al~~L~~n~~~g~~~v~aVk~p~~~~~~~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG~ 348 (401)
+.+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++++++|+|||++|||+++++++|++++++++++||+
T Consensus 239 i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~ 318 (547)
T 1kp8_A 239 VAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQ 318 (547)
T ss_dssp HHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEE
T ss_pred HHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEc-----------------------------------------------CeEEEEccCCCHHHHHHHHHHHHHH
Q 015737 349 AIKVVITK-----------------------------------------------DSTLIVTDGSTRAAVEKRISEIRSL 381 (401)
Q Consensus 349 ~~~v~v~~-----------------------------------------------~~~tIi~~g~~~~~l~e~~~~l~~~ 381 (401)
|+.|++++ ..|||++||+++..++|++|.++|+
T Consensus 319 a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DA 398 (547)
T 1kp8_A 319 AKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDA 398 (547)
T ss_dssp EEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHH
T ss_pred eeEEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHH
Confidence 99999741 4589999999999999999999999
Q ss_pred HHHH
Q 015737 382 AEVV 385 (401)
Q Consensus 382 l~~~ 385 (401)
|..+
T Consensus 399 l~~~ 402 (547)
T 1kp8_A 399 LHAT 402 (547)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9744
No 2
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=2.2e-81 Score=655.88 Aligned_cols=354 Identities=45% Similarity=0.767 Sum_probs=301.4
Q ss_pred cceeeecCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEEecchHHHhccccccCcccchHHHHHHHHHh
Q 015737 30 MVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGA 109 (401)
Q Consensus 30 ~~k~i~~g~~~~a~~~~~~~~~~la~~v~ttlGP~G~~kmI~~~~g~~~iTnDG~TIlk~i~~~hP~~~~gakll~~~a~ 109 (401)
|+|+|.|| +++|+.|++||+.++++|+|||||+||||||++++|+|+|||||+||||+|+++||+||+||||++++|+
T Consensus 2 ~~k~~~~g--~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~ 79 (545)
T 1iok_A 2 AAKEVKFN--SDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVAS 79 (545)
T ss_dssp CCEEEEEH--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHH
T ss_pred Cchhhhcc--HHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHH
Confidence 68999999 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCcchHHHHHHHHHHhhHHHHHcCCChhhHHHHHHHHHHHHHHHHhccccccchh-hhHhhhhhccCCchhHH
Q 015737 110 RTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVEDH-ELADVAAVSAGNDYTVG 188 (401)
Q Consensus 110 ~qd~~~GDGTTt~vvLa~~LL~~~~~li~~G~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~la 188 (401)
+||+++||||||++|||++||+++.+++++|+||+.|++||++|.+.+++.|+++++|+++. +|.++|++|++++++++
T Consensus 80 ~qd~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~ 159 (545)
T 1iok_A 80 RTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIG 159 (545)
T ss_dssp HGGGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHH
T ss_pred hhccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHhhcCCchhHH
Confidence 99999999999999999999999999999999999999999999999999999999999866 89999999999999999
Q ss_pred HHHHHHHHhhccCCcEEeeCCCCccceeEEEeceEEeecccCcccccccccceeEeeCceEEEecccCCCHHHHHHHHHH
Q 015737 189 KMISDALQQVGRNGVVTIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKIKNPKDMFKILDS 268 (401)
Q Consensus 189 ~li~~Av~~v~~~g~I~i~~G~~~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~Ill~d~~I~~~~~i~~~le~ 268 (401)
++++||+.+++++|.|++++|++++||+++++|++|+++|.||||++++++|+++++||+|+++|++|++++++++++|+
T Consensus 160 ~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~ 239 (545)
T 1iok_A 160 QQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLES 239 (545)
T ss_dssp HHHHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC-------
T ss_pred HHHHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCcCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCEEEEecCcchHHHHHHHHhcccCcceEEEEecCCccccccccHHHHHHHhCCeEEecCCCCcccCCCCCCcee
Q 015737 269 AVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGT 348 (401)
Q Consensus 269 i~~~g~~lvIi~~~I~~~al~~L~~n~~~g~~~v~aVk~p~~~~~~~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG~ 348 (401)
+.+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++++++|+|||++|||+++++++|++++++++++||+
T Consensus 240 i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~ 319 (545)
T 1iok_A 240 VIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGR 319 (545)
T ss_dssp ----CCCCEEEESCBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTTSEE
T ss_pred HHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEc-----------------------------------------------CeEEEEccCCCHHHHHHHHHHHHHH
Q 015737 349 AIKVVITK-----------------------------------------------DSTLIVTDGSTRAAVEKRISEIRSL 381 (401)
Q Consensus 349 ~~~v~v~~-----------------------------------------------~~~tIi~~g~~~~~l~e~~~~l~~~ 381 (401)
|+.|++.+ ..|||++||+++..++|++|.++|+
T Consensus 320 a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DA 399 (545)
T 1iok_A 320 AKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDA 399 (545)
T ss_dssp EEEEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred CcEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 99999752 3579999999999999999999999
Q ss_pred HHHH
Q 015737 382 AEVV 385 (401)
Q Consensus 382 l~~~ 385 (401)
|..+
T Consensus 400 l~~~ 403 (545)
T 1iok_A 400 LNAT 403 (545)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9744
No 3
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=1.2e-80 Score=650.43 Aligned_cols=353 Identities=44% Similarity=0.753 Sum_probs=341.6
Q ss_pred cceeeecCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEEecchHHHhccccccCcccchHHHHHHHHHh
Q 015737 30 MVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGA 109 (401)
Q Consensus 30 ~~k~i~~g~~~~a~~~~~~~~~~la~~v~ttlGP~G~~kmI~~~~g~~~iTnDG~TIlk~i~~~hP~~~~gakll~~~a~ 109 (401)
|+|+|.|| .++|+.|++||+.++++|+|||||+||||||++++|+|+|||||+||||+|+++||+||+||||++++|+
T Consensus 1 ~~k~~~~g--~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~ 78 (543)
T 1we3_A 1 MAKILVFD--EAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVAS 78 (543)
T ss_dssp -CEEEEEH--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHH
T ss_pred CCcccccc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHH
Confidence 57999999 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCcchHHHHHHHHHHhhHHHHHcCCChhhHHHHHHHHHHHHHHHHhccccccchh-hhHhhhhhccCCchhHH
Q 015737 110 RTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVEDH-ELADVAAVSAGNDYTVG 188 (401)
Q Consensus 110 ~qd~~~GDGTTt~vvLa~~LL~~~~~li~~G~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~la 188 (401)
+||+++||||||++|||++||+++.+++++|+||+.|++||++|.+.+++.|+++++|+++. +|.++|++|++ +++++
T Consensus 79 ~qd~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~ 157 (543)
T 1we3_A 79 KTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVEDRKAIEEVATISAN-DPEVG 157 (543)
T ss_dssp HHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHH
T ss_pred hhheecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999866 89999999998 89999
Q ss_pred HHHHHHHHhhccCCcEEeeCCCCccceeEEEeceEEeecccCcccccccccceeEeeCceEEEecccCCCHHHHHHHHHH
Q 015737 189 KMISDALQQVGRNGVVTIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKIKNPKDMFKILDS 268 (401)
Q Consensus 189 ~li~~Av~~v~~~g~I~i~~G~~~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~Ill~d~~I~~~~~i~~~le~ 268 (401)
++++||+.+++++|.|++++|++++|++++++|++|+++|.||||++++++|+++++||+|+++|++|++++++++++|+
T Consensus 158 ~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~ 237 (543)
T 1we3_A 158 KLIADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQ 237 (543)
T ss_dssp HHHHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCCcCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCEEEEecCcchHHHHHHHHhcccCcceEEEEecCCccccccccHHHHHHHhCCeEEecCCCCcccCCCCCCcee
Q 015737 269 AVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGT 348 (401)
Q Consensus 269 i~~~g~~lvIi~~~I~~~al~~L~~n~~~g~~~v~aVk~p~~~~~~~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG~ 348 (401)
+.+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++++++|+|||++|||+++++++|++++++++++||+
T Consensus 238 i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~ 317 (543)
T 1we3_A 238 VAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGR 317 (543)
T ss_dssp HHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEE
T ss_pred HHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEc-----------------------------------------------CeEEEEccCCCHHHHHHHHHHHHHH
Q 015737 349 AIKVVITK-----------------------------------------------DSTLIVTDGSTRAAVEKRISEIRSL 381 (401)
Q Consensus 349 ~~~v~v~~-----------------------------------------------~~~tIi~~g~~~~~l~e~~~~l~~~ 381 (401)
|+.|++.+ ..|||++||+++..++|++|.++|+
T Consensus 318 a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DA 397 (543)
T 1we3_A 318 AERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDA 397 (543)
T ss_dssp EEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred ceEEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 99998741 4589999999999999999999999
Q ss_pred HHHH
Q 015737 382 AEVV 385 (401)
Q Consensus 382 l~~~ 385 (401)
|..+
T Consensus 398 l~~~ 401 (543)
T 1we3_A 398 LNAT 401 (543)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9744
No 4
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=1.7e-81 Score=655.30 Aligned_cols=353 Identities=44% Similarity=0.758 Sum_probs=272.1
Q ss_pred cceeeecCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEEecchHHHhccccccCcccchHHHHHHHHHh
Q 015737 30 MVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGA 109 (401)
Q Consensus 30 ~~k~i~~g~~~~a~~~~~~~~~~la~~v~ttlGP~G~~kmI~~~~g~~~iTnDG~TIlk~i~~~hP~~~~gakll~~~a~ 109 (401)
|+|+|.|| ++||+.|++|+++++++|+|||||+||||||+++.|+|+|||||+||||+|+++||++|+||||++++|+
T Consensus 1 ~~k~~~~~--~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~ 78 (546)
T 3rtk_A 1 MAKTIAYD--EEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAK 78 (546)
T ss_dssp --------------------------------------------------------------CCCHHHHHHHHHHHHHHT
T ss_pred CCceeecc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHH
Confidence 68999999 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCcchHHHHHHHHHHhhHHHHHcCCChhhHHHHHHHHHHHHHHHHhccccccchh-hhHhhhhhccCCchhHH
Q 015737 110 RTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVEDH-ELADVAAVSAGNDYTVG 188 (401)
Q Consensus 110 ~qd~~~GDGTTt~vvLa~~LL~~~~~li~~G~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~la 188 (401)
+||+++||||||++|||++||+++.+++++|+||+.|++||++|.+.++++|+++++|+++. +|.++|++|++ ++.++
T Consensus 79 ~qd~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~ 157 (546)
T 3rtk_A 79 KTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVETKEQIAATAAISAG-DQSIG 157 (546)
T ss_dssp SCC-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHH
T ss_pred hhhhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCChHHHHhHeEEeCC-chHHH
Confidence 99999999999999999999999999999999999999999999999999999999999876 89999999998 88999
Q ss_pred HHHHHHHHhhccCCcEEeeCCCCccceeEEEeceEEeecccCcccccccccceeEeeCceEEEecccCCCHHHHHHHHHH
Q 015737 189 KMISDALQQVGRNGVVTIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKIKNPKDMFKILDS 268 (401)
Q Consensus 189 ~li~~Av~~v~~~g~I~i~~G~~~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~Ill~d~~I~~~~~i~~~le~ 268 (401)
++++||+.+++++|.|+++.+.+..+.+++++||+|+++|.||||++++++|+++++||+|+++|++|++++++++++|+
T Consensus 158 ~liadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~~~~l~~~le~ 237 (546)
T 3rtk_A 158 DLIAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEK 237 (546)
T ss_dssp HHHHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECCSTTTHHHHHH
T ss_pred HHHHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCccCCHHHHHHHHHH
Confidence 99999999999999999987766654449999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCEEEEecCcchHHHHHHHHhcccCcceEEEEecCCccccccccHHHHHHHhCCeEEecCCCCcccCCCCCCcee
Q 015737 269 AVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGT 348 (401)
Q Consensus 269 i~~~g~~lvIi~~~I~~~al~~L~~n~~~g~~~v~aVk~p~~~~~~~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG~ 348 (401)
+.+.|+|||||+++|+++|+++|+.|+++|+++|+|||+|+||+.++++|+|||++|||+++++++|++++++++++||+
T Consensus 238 I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~ 317 (546)
T 3rtk_A 238 VIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGK 317 (546)
T ss_dssp HHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEE
T ss_pred HHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEcC-----------------------------------------------eEEEEccCCCHHHHHHHHHHHHHH
Q 015737 349 AIKVVITKD-----------------------------------------------STLIVTDGSTRAAVEKRISEIRSL 381 (401)
Q Consensus 349 ~~~v~v~~~-----------------------------------------------~~tIi~~g~~~~~l~e~~~~l~~~ 381 (401)
|++|+++++ .|||++||+++..++|++|.++|+
T Consensus 318 a~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DA 397 (546)
T 3rtk_A 318 ARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDA 397 (546)
T ss_dssp EEEEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHH
T ss_pred eEEEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 999997532 578889999999999999999999
Q ss_pred HHHH
Q 015737 382 AEVV 385 (401)
Q Consensus 382 l~~~ 385 (401)
|..+
T Consensus 398 l~a~ 401 (546)
T 3rtk_A 398 VRNA 401 (546)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9743
No 5
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=8.3e-69 Score=562.51 Aligned_cols=325 Identities=24% Similarity=0.379 Sum_probs=303.2
Q ss_pred ceeeecCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEEecchHHHhccccccCcccchHHHHHHHHHhc
Q 015737 31 VKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGAR 110 (401)
Q Consensus 31 ~k~i~~g~~~~a~~~~~~~~~~la~~v~ttlGP~G~~kmI~~~~g~~~iTnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 110 (401)
++++.|| +++|..|++||+.++++|+|||||+||||||+++.|+++|||||+||||+|+++||+ |||++++|++
T Consensus 15 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 88 (548)
T 1q3q_A 15 GTQRYVG--RDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPA----AKMMVEVAKT 88 (548)
T ss_dssp TCEEEEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHH----HHHHHHHHHH
T ss_pred Ccceech--HHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchH----HHHHHHHHHh
Confidence 5778999 899999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCCcchHHHHHHHHHHhhHHHHHcCCChhhHHHHHHHHHHHHHHHHhccccccch--h-hhHhhhhhccC-----
Q 015737 111 TNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVED--H-ELADVAAVSAG----- 182 (401)
Q Consensus 111 qd~~~GDGTTt~vvLa~~LL~~~~~li~~G~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~--~-~l~~va~ts~~----- 182 (401)
||+++||||||++|||++||+++.+++++|+||+.|++||++|.+.++++|++++++++. . +|.++|+||++
T Consensus 89 qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~ 168 (548)
T 1q3q_A 89 QDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAE 168 (548)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHSCSSTTG
T ss_pred cCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhccccc
Confidence 999999999999999999999999999999999999999999999999999999999874 3 89999998865
Q ss_pred -CchhHHHHHHHHHHhhccC--C-------cEEee--CCCCccceeEEEeceEEeecccCcccccccccceeEeeCceEE
Q 015737 183 -NDYTVGKMISDALQQVGRN--G-------VVTIE--KGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLL 250 (401)
Q Consensus 183 -~~~~la~li~~Av~~v~~~--g-------~I~i~--~G~~~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~Il 250 (401)
+++.|+++++||+.+++++ | .|+++ +|++++|| ++++|++|+++|.||| |+++++||+|+
T Consensus 169 ~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIl 240 (548)
T 1q3q_A 169 SHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEES-ELVRGVVIDKEVVHPR-------MPKRVENAKIA 240 (548)
T ss_dssp GGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGC-EEESSEEESCCCSSTT-------SCSEESSEEEE
T ss_pred cchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccce-EEEeeEEEeccCCCCC-------CcceecCCEEE
Confidence 3689999999999999865 4 57665 99999999 9999999999999997 57789999999
Q ss_pred Eeccc-------------CCCHHHH-----------HHHHHHHHHcCCCEEEEecCcchHHHHHHHHhcccCcceEEEEe
Q 015737 251 LVDKK-------------IKNPKDM-----------FKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIK 306 (401)
Q Consensus 251 l~d~~-------------I~~~~~i-----------~~~le~i~~~g~~lvIi~~~I~~~al~~L~~n~~~g~~~v~aVk 306 (401)
++|++ |++++++ .++++++.+.|+||||++++|+++|+++|+.|+ |+||
T Consensus 241 l~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av- 313 (548)
T 1q3q_A 241 LINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYG------IMAV- 313 (548)
T ss_dssp EECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTT------CEEE-
T ss_pred EEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCC------cEEE-
Confidence 99998 7888886 678899999999999999999999999999986 5786
Q ss_pred cCCccccccccHHHHHHHhCCeEEecCCCCcccCCCCCCceeeeEEEEE---------------cCeEEEEccCCCHHHH
Q 015737 307 APAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT---------------KDSTLIVTDGSTRAAV 371 (401)
Q Consensus 307 ~p~~~~~~~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG~~~~v~v~---------------~~~~tIi~~g~~~~~l 371 (401)
+++++++|+|||++|||++++ +++++++++||+|+.|++. +..|||++||+++..+
T Consensus 314 ----~~~~k~~le~ia~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l 384 (548)
T 1q3q_A 314 ----RRVKKSDMEKLAKATGAKIVT-----NVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVI 384 (548)
T ss_dssp ----CSCCHHHHHHHHHHHCCCCBS-----SGGGCCGGGCEEESEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHH
T ss_pred ----ccCCHHHHHHHHHHhCCeEec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCCCCeEEEEECCCChHHH
Confidence 688999999999999999999 4899999999999999975 4789999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 015737 372 EKRISEIRSLAEVV 385 (401)
Q Consensus 372 ~e~~~~l~~~l~~~ 385 (401)
+|++|.++|+|..+
T Consensus 385 ~E~er~l~DAl~~~ 398 (548)
T 1q3q_A 385 DEVERALEDAVKVV 398 (548)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999744
No 6
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=1.2e-68 Score=561.12 Aligned_cols=325 Identities=23% Similarity=0.373 Sum_probs=295.9
Q ss_pred ceeeecCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEEecchHHHhccccccCcccchHHHHHHHHHhc
Q 015737 31 VKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGAR 110 (401)
Q Consensus 31 ~k~i~~g~~~~a~~~~~~~~~~la~~v~ttlGP~G~~kmI~~~~g~~~iTnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 110 (401)
+.+..|| .++|..|+.||+.++++|+|||||+||||||+++.|+++|||||+||||+|+++||+ |||++++|++
T Consensus 22 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 95 (553)
T 3ko1_A 22 GSSRTYG--KEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPA----AKLLVQIAKG 95 (553)
T ss_dssp ------C--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSHH----HHHHHHHHHT
T ss_pred Ccccchh--HHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccChh----HHHHHHHhhC
Confidence 4567788 789999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCCcchHHHHHHHHHHhhHHHHHcCCChhhHHHHHHHHHHHHHHHHhccccccc--hh-hhHhhhhhccCC----
Q 015737 111 TNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVE--DH-ELADVAAVSAGN---- 183 (401)
Q Consensus 111 qd~~~GDGTTt~vvLa~~LL~~~~~li~~G~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~~---- 183 (401)
||+++||||||++|||++||+++.+++++|+||+.|++||++|.+.++++|++++++++ +. .|.++|+||+++
T Consensus 96 qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~L~~vA~tsl~sK~~~ 175 (553)
T 3ko1_A 96 QDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSINDTDLLRKIAMTSLSSKAVA 175 (553)
T ss_dssp CSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHHHHHHHHHHHTTSSCC
T ss_pred CcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999987 44 899999999886
Q ss_pred --chhHHHHHHHHHHhhccC--Cc-------EEee--CCCCccceeEEEeceEEeecccCcccccccccceeEeeCceEE
Q 015737 184 --DYTVGKMISDALQQVGRN--GV-------VTIE--KGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLL 250 (401)
Q Consensus 184 --~~~la~li~~Av~~v~~~--g~-------I~i~--~G~~~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~Il 250 (401)
+++|+++++||+.+++++ |. |+++ .|+++.|+ ++++||+|+++|.||| |+++++||+|+
T Consensus 176 ~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIl 247 (553)
T 3ko1_A 176 GAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDT-QLVYGIVVDKEVVHPG-------MPKRLENAKIA 247 (553)
T ss_dssp TTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGC-EEESEEEECSCBSCTT-------SCSCCBSCEEE
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccc-eeeEEEEecccccCCC-------CccccccceEE
Confidence 789999999999999875 65 6654 78899998 9999999999999997 67889999999
Q ss_pred Eecc-------------cCCCHHHH-----------HHHHHHHHHcCCCEEEEecCcchHHHHHHHHhcccCcceEEEEe
Q 015737 251 LVDK-------------KIKNPKDM-----------FKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIK 306 (401)
Q Consensus 251 l~d~-------------~I~~~~~i-----------~~~le~i~~~g~~lvIi~~~I~~~al~~L~~n~~~g~~~v~aVk 306 (401)
++|+ .|++++++ .++++++.+.|+||||++++|+++++++|+.++ |++|
T Consensus 248 l~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~g------I~~v- 320 (553)
T 3ko1_A 248 LIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKG------VLAV- 320 (553)
T ss_dssp EECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHT------CEEE-
T ss_pred EecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcc------hhhh-
Confidence 9999 46788774 456789999999999999999999999999775 4776
Q ss_pred cCCccccccccHHHHHHHhCCeEEecCCCCcccCCCCCCceeeeEEEEE---------------cCeEEEEccCCCHHHH
Q 015737 307 APAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT---------------KDSTLIVTDGSTRAAV 371 (401)
Q Consensus 307 ~p~~~~~~~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG~~~~v~v~---------------~~~~tIi~~g~~~~~l 371 (401)
+++++++|+|||++|||++++ +++++++++||+|+.|++. +..|||++||+++..+
T Consensus 321 ----~~v~k~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~~~~TI~lrG~te~~l 391 (553)
T 3ko1_A 321 ----RRAKKSDLEKLARATGGRVVS-----NIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNPKSISILIRGGLERLV 391 (553)
T ss_dssp ----CCCCHHHHHHHHTTTTCCEES-----CGGGCCSSSSEECSEEECCCCSSSCCEEEESCSSSSCEEEEECCSSTTHH
T ss_pred ----hhhhhhhHHHHHHhhCCeeec-----ccccCChhhcchHHHHHHhhcCcceEEEeccCCCCceEEEeeeccHHHHH
Confidence 567899999999999999999 4899999999999999964 5789999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 015737 372 EKRISEIRSLAEVV 385 (401)
Q Consensus 372 ~e~~~~l~~~l~~~ 385 (401)
+|++|.++|+|..+
T Consensus 392 ~E~er~l~DAl~~~ 405 (553)
T 3ko1_A 392 DETERALRDALGTV 405 (553)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999743
No 7
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=1.4e-68 Score=560.60 Aligned_cols=325 Identities=24% Similarity=0.362 Sum_probs=296.9
Q ss_pred ceeeecCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEEecchHHHhccccccCcccchHHHHHHHHHhc
Q 015737 31 VKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGAR 110 (401)
Q Consensus 31 ~k~i~~g~~~~a~~~~~~~~~~la~~v~ttlGP~G~~kmI~~~~g~~~iTnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 110 (401)
+.++.|| +++|..|+.||+.++++|+|||||+||||||+++.|+++|||||+||||+|+++||+ |||++++|++
T Consensus 13 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 86 (543)
T 1a6d_B 13 GTKRESG--KDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPA----AKMMVEVSKT 86 (543)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHH----HHHHHHHHTC
T ss_pred cchhhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchH----HHHHHHHHHh
Confidence 4567888 789999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCCcchHHHHHHHHHHhhHHHHHcCCChhhHHHHHHHHHHHHHHHHhccccccch--h-hhHhhhhhccC-----
Q 015737 111 TNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVED--H-ELADVAAVSAG----- 182 (401)
Q Consensus 111 qd~~~GDGTTt~vvLa~~LL~~~~~li~~G~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~--~-~l~~va~ts~~----- 182 (401)
||+++||||||++|||++||+++.+++++|+||+.|++||++|.+.++++|++++++++. . +|.++|+|+++
T Consensus 87 qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~l~~va~tsl~sKi~~ 166 (543)
T 1a6d_B 87 QDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSKSAS 166 (543)
T ss_dssp TTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHHHHHHHHHHHTTSGGG
T ss_pred cCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhcccccc
Confidence 999999999999999999999999999999999999999999999999999999999874 3 89999998764
Q ss_pred -CchhHHHHHHHHHHhhccC--Cc-------EEee--CCCCccceeEEEeceEEeecccCcccccccccceeEeeCceEE
Q 015737 183 -NDYTVGKMISDALQQVGRN--GV-------VTIE--KGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLL 250 (401)
Q Consensus 183 -~~~~la~li~~Av~~v~~~--g~-------I~i~--~G~~~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~Il 250 (401)
+++.|+++++||+.+++++ |. |+++ +|++++|+ ++++|++|+++|.||| |+++++||+|+
T Consensus 167 ~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIl 238 (543)
T 1a6d_B 167 VAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDT-QLINGIIVDKEKVHPG-------MPDVVKDAKIA 238 (543)
T ss_dssp GGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGC-EEESEEEESCCCSSTT-------SCSEEEEEEEE
T ss_pred ccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccce-eEEccEEEecCCCCCC-------CcceecCCeEE
Confidence 4689999999999999875 53 6665 99999999 9999999999999997 57789999999
Q ss_pred Eeccc-------------CCCHHHH-----------HHHHHHHHHcCCCEEEEecCcchHHHHHHHHhcccCcceEEEEe
Q 015737 251 LVDKK-------------IKNPKDM-----------FKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIK 306 (401)
Q Consensus 251 l~d~~-------------I~~~~~i-----------~~~le~i~~~g~~lvIi~~~I~~~al~~L~~n~~~g~~~v~aVk 306 (401)
++|++ |++++++ .++++++.+.|+||||++++|+++|+++|+.|+ |+||
T Consensus 239 l~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av- 311 (543)
T 1a6d_B 239 LLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAG------IYAV- 311 (543)
T ss_dssp EESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTT------CEEE-
T ss_pred EEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCC------eeEe-
Confidence 99998 7888876 678899999999999999999999999999986 5786
Q ss_pred cCCccccccccHHHHHHHhCCeEEecCCCCcccCCCCCCceeeeEEEEE---------------cCeEEEEccCCCHHHH
Q 015737 307 APAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT---------------KDSTLIVTDGSTRAAV 371 (401)
Q Consensus 307 ~p~~~~~~~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG~~~~v~v~---------------~~~~tIi~~g~~~~~l 371 (401)
+++++++|+|||++|||++++ +++++++++||+|+.|++. +..|||++||+++..+
T Consensus 312 ----~~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l 382 (543)
T 1a6d_B 312 ----RRVKKSDMDKLAKATGASIVS-----TIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNPKAVSILVRGETEHVV 382 (543)
T ss_dssp ----CSCCHHHHHHHHHHHTCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESSSSCEEEEEEESSHHHH
T ss_pred ----ccCCHHHHHHHHHHhCCceec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEecCCCHHHH
Confidence 688999999999999999999 4899999999999999974 4789999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 015737 372 EKRISEIRSLAEVV 385 (401)
Q Consensus 372 ~e~~~~l~~~l~~~ 385 (401)
+|++|.++|+|..+
T Consensus 383 ~E~er~l~DAl~~~ 396 (543)
T 1a6d_B 383 DEMERSITDSLHVV 396 (543)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999743
No 8
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=3.5e-69 Score=566.23 Aligned_cols=330 Identities=20% Similarity=0.299 Sum_probs=303.8
Q ss_pred ceeeecCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEEecchHHHhccccccCcccchHHHHHHHHHhc
Q 015737 31 VKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGAR 110 (401)
Q Consensus 31 ~k~i~~g~~~~a~~~~~~~~~~la~~v~ttlGP~G~~kmI~~~~g~~~iTnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 110 (401)
+|++.|| .++|..|+.||+.|+++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |||++++|++
T Consensus 16 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 89 (559)
T 3p9d_A 16 GGEKISG--DDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPA----GKILVELAQQ 89 (559)
T ss_dssp SCEEEET--HHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHH----HHHHHHHHHH
T ss_pred cccccch--HHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHH----HHHHHHHHHH
Confidence 7899999 899999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCCcchHHHHHHHHHHhhHHHHHcCCChhhHHHHHHHHHHHHHHHHhc-cccccch--h-hhHhhhhhccCC---
Q 015737 111 TNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKL-TSREVED--H-ELADVAAVSAGN--- 183 (401)
Q Consensus 111 qd~~~GDGTTt~vvLa~~LL~~~~~li~~G~~p~~I~~g~~~a~~~~~~~L~~-~s~~v~~--~-~l~~va~ts~~~--- 183 (401)
||+++||||||++|||++||+++.+++++|+||+.|++||++|.+.++++|++ +++|++. . +|.++|+||+++
T Consensus 90 qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~ 169 (559)
T 3p9d_A 90 QDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKII 169 (559)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGG
T ss_pred HHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcc
Confidence 99999999999999999999999999999999999999999999999999999 9999874 3 899999999986
Q ss_pred ---chhHHHHHHHHHHhhcc-----CCc-----EE--eeCCCCccceeEEEeceEEeecccCcccccccccceeEee--C
Q 015737 184 ---DYTVGKMISDALQQVGR-----NGV-----VT--IEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFH--D 246 (401)
Q Consensus 184 ---~~~la~li~~Av~~v~~-----~g~-----I~--i~~G~~~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~--n 246 (401)
+++|+++++||+.++++ +|. |+ ..+|++++|| ++++||+|+++|.||| |+++++ |
T Consensus 170 ~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds-~lv~G~v~dk~~~~~~-------m~~~ie~~n 241 (559)
T 3p9d_A 170 GADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATES-LLVPGYALNCTVASQA-------MPKRIAGGN 241 (559)
T ss_dssp GTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCC-BCCSEECCCCCCSSTT-------SCSEECSSS
T ss_pred cchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccce-eEeccEEEeecccCCC-------cceeeccCC
Confidence 79999999999999984 244 22 2359999998 9999999999999997 778889 9
Q ss_pred ceEEEecccC-------------CCHHH-----------HHHHHHHHHHcCCCEEEEecCcchHHHHHHHHhcccCcceE
Q 015737 247 GKLLLVDKKI-------------KNPKD-----------MFKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKA 302 (401)
Q Consensus 247 ~~Ill~d~~I-------------~~~~~-----------i~~~le~i~~~g~~lvIi~~~I~~~al~~L~~n~~~g~~~v 302 (401)
|+|+++|++| +++++ +.++++++.+.|+||||++++|+++|+++|+.|++
T Consensus 242 ~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~I------ 315 (559)
T 3p9d_A 242 VKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKI------ 315 (559)
T ss_dssp BCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTTC------
T ss_pred ceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcCC------
Confidence 9999999986 45555 56789999999999999999999999999999974
Q ss_pred EEEecCCccccccccHHHHHHHhCCeEEecCCCCcc-cCCCCCCceeeeEEEEE---------------cCeEEEEccCC
Q 015737 303 AAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTL-DKAGKEVLGTAIKVVIT---------------KDSTLIVTDGS 366 (401)
Q Consensus 303 ~aVk~p~~~~~~~~~Le~Ia~~tGa~~i~~~~g~~~-~~~~~~~LG~~~~v~v~---------------~~~~tIi~~g~ 366 (401)
+|| +++++.+|+|||++|||+++++..|++. +++++++||+|+.|++. ...|||++||+
T Consensus 316 ~av-----~~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~ 390 (559)
T 3p9d_A 316 MGV-----RRCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSKHSSSSIILRGA 390 (559)
T ss_dssp EEE-----SSCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESSSCCCCEEEEES
T ss_pred ceE-----ccCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCCCCEEEEEEcCC
Confidence 775 6888999999999999999998777765 89999999999999953 46899999999
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 015737 367 TRAAVEKRISEIRSLAEVV 385 (401)
Q Consensus 367 ~~~~l~e~~~~l~~~l~~~ 385 (401)
++..++|++|.++|+|..+
T Consensus 391 te~~l~E~kr~l~DAL~~~ 409 (559)
T 3p9d_A 391 NDYSLDEMERSLHDSLSVV 409 (559)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999743
No 9
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=1.3e-68 Score=560.68 Aligned_cols=324 Identities=21% Similarity=0.355 Sum_probs=299.7
Q ss_pred ceeeecCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEEecchHHHhccccccCcccchHHHHHHHHHhc
Q 015737 31 VKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGAR 110 (401)
Q Consensus 31 ~k~i~~g~~~~a~~~~~~~~~~la~~v~ttlGP~G~~kmI~~~~g~~~iTnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 110 (401)
+.++.|| +++|..|+.||+.++++|+|||||+||||||+++.|+++|||||+||||+|+++||+ |||++++|++
T Consensus 14 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 87 (545)
T 1a6d_A 14 GTQREQG--KNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPT----AKMIVEVSKA 87 (545)
T ss_dssp ---CEEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHH----HHHHHGGGGC
T ss_pred cchhhch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchH----HHHHHHHHHh
Confidence 4567888 899999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCCcchHHHHHHHHHHhhHHHHHcCCChhhHHHHHHHHHHHHHHHHhccccccc-hh-hhHhhhhhccC------
Q 015737 111 TNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVE-DH-ELADVAAVSAG------ 182 (401)
Q Consensus 111 qd~~~GDGTTt~vvLa~~LL~~~~~li~~G~~p~~I~~g~~~a~~~~~~~L~~~s~~v~-~~-~l~~va~ts~~------ 182 (401)
||+++||||||++|||++||+++.+++++|+||+.|++||++|.+.++++|+++++| + +. +|.++|+||++
T Consensus 88 qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~~~~~~l~~va~tsl~sKi~~~ 166 (545)
T 1a6d_A 88 QDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-STDDATLRKIALTALSGKNTGL 166 (545)
T ss_dssp TTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-CCCHHHHHHHHHHHTTTSSCCS
T ss_pred cCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHhcccccc
Confidence 999999999999999999999999999999999999999999999999999999998 6 44 89999998864
Q ss_pred CchhHHHHHHHHHHhhccC---------CcEEee--CCCCccceeEEEeceEEeecccCcccccccccceeEeeCceEEE
Q 015737 183 NDYTVGKMISDALQQVGRN---------GVVTIE--KGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLL 251 (401)
Q Consensus 183 ~~~~la~li~~Av~~v~~~---------g~I~i~--~G~~~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~Ill 251 (401)
+++.|+++++||+.+++++ +.|+++ +|++++|| ++++|++|+++|.||| |+++++||+|++
T Consensus 167 ~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll 238 (545)
T 1a6d_A 167 SNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDT-QFISGIVIDKEKVHSK-------MPDVVKNAKIAL 238 (545)
T ss_dssp THHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTC-EEESEEEESCCCSCTT-------SCSEEEEEEEEE
T ss_pred cHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceee-EEEeeEEEeccCCCCC-------CcceecCCEEEE
Confidence 4799999999999999865 367765 99999999 9999999999999997 577899999999
Q ss_pred eccc-------------CCCHHHH-----------HHHHHHHHHcCCCEEEEecCcchHHHHHHHHhcccCcceEEEEec
Q 015737 252 VDKK-------------IKNPKDM-----------FKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKA 307 (401)
Q Consensus 252 ~d~~-------------I~~~~~i-----------~~~le~i~~~g~~lvIi~~~I~~~al~~L~~n~~~g~~~v~aVk~ 307 (401)
+|++ |++++++ .++++++.+.|+||||++++|+++|+++|+.|+ |+||
T Consensus 239 ~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av-- 310 (545)
T 1a6d_A 239 IDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEG------IYAV-- 310 (545)
T ss_dssp ECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHT------CEEE--
T ss_pred EecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCC------eeEe--
Confidence 9998 7788776 678899999999999999999999999999986 5786
Q ss_pred CCccccccccHHHHHHHhCCeEEecCCCCcccCCCCCCceeeeEEEEE---------------cCeEEEEccCCCHHHHH
Q 015737 308 PAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT---------------KDSTLIVTDGSTRAAVE 372 (401)
Q Consensus 308 p~~~~~~~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG~~~~v~v~---------------~~~~tIi~~g~~~~~l~ 372 (401)
+++++++|+|||++|||++++ +++++++++||+|+.|++. +..|||++||+++..++
T Consensus 311 ---~~~~k~~le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~ 382 (545)
T 1a6d_A 311 ---RRVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNPKAVSILIRGGTDHVVS 382 (545)
T ss_dssp ---CSCCHHHHHHHHHHHCCCEES-----SGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESCSSCEEEEECCSSSTTHH
T ss_pred ---ccCCHHHHHHHHHHhCCeeec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEEcCCCHHHHH
Confidence 678999999999999999999 4899999999999999974 47899999999999999
Q ss_pred HHHHHHHHHHHHH
Q 015737 373 KRISEIRSLAEVV 385 (401)
Q Consensus 373 e~~~~l~~~l~~~ 385 (401)
|++|.++|+|..+
T Consensus 383 E~kr~l~DAl~~~ 395 (545)
T 1a6d_A 383 EVERALNDAIRVV 395 (545)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999743
No 10
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=2.6e-68 Score=558.25 Aligned_cols=325 Identities=23% Similarity=0.360 Sum_probs=299.2
Q ss_pred ceeeecCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEEecchHHHhccccccCcccchHHHHHHHHHhc
Q 015737 31 VKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGAR 110 (401)
Q Consensus 31 ~k~i~~g~~~~a~~~~~~~~~~la~~v~ttlGP~G~~kmI~~~~g~~~iTnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 110 (401)
+.+..+| .++|..|+.||+.++++|+|||||+||||||+++.|+++|||||+||||+|+++||+ |||++++|++
T Consensus 11 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 84 (543)
T 3ruv_A 11 NMKRYMG--RDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPA----AKMLIEVAKT 84 (543)
T ss_dssp SEEEEET--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHH----HHHHHHHHHH
T ss_pred Ccchhcc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHH
Confidence 4566778 799999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCCcchHHHHHHHHHHhhHHHHHcCCChhhHHHHHHHHHHHHHHHHhccccccc--hh-hhHhhhhhccCC----
Q 015737 111 TNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVE--DH-ELADVAAVSAGN---- 183 (401)
Q Consensus 111 qd~~~GDGTTt~vvLa~~LL~~~~~li~~G~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~~---- 183 (401)
||+++||||||++|||++||+++.+++++|+||+.|++||++|.+.++++|++++++++ +. +|.++|+||+++
T Consensus 85 qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~L~~va~tsl~sK~~~ 164 (543)
T 3ruv_A 85 QEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAE 164 (543)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHHHHTCGG
T ss_pred HHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999987 44 899999999864
Q ss_pred --chhHHHHHHHHHHhhccC-Cc-----EEee--CCCCccceeEEEeceEEeecccCcccccccccceeEeeCceEEEec
Q 015737 184 --DYTVGKMISDALQQVGRN-GV-----VTIE--KGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVD 253 (401)
Q Consensus 184 --~~~la~li~~Av~~v~~~-g~-----I~i~--~G~~~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~Ill~d 253 (401)
+++|+++++||+.+++++ |. |+++ .|+++.|+ ++++|++|+++|.||| |+++++||+|+++|
T Consensus 165 ~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~~~n~kIll~~ 236 (543)
T 3ruv_A 165 KAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDT-ELIKGVLVDKERVSAQ-------MPKKVTDAKIALLN 236 (543)
T ss_dssp GCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGC-EEESSEEESCCCSCTT-------SCSEEEEEEEEEES
T ss_pred hhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccc-eeecceEEeccccCcc-------ccccccCcEEEEEc
Confidence 799999999999999987 64 6554 79899998 9999999999999997 68889999999999
Q ss_pred cc-------------CCCHHH-----------HHHHHHHHHHcCCCEEEEecCcchHHHHHHHHhcccCcceEEEEecCC
Q 015737 254 KK-------------IKNPKD-----------MFKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPA 309 (401)
Q Consensus 254 ~~-------------I~~~~~-----------i~~~le~i~~~g~~lvIi~~~I~~~al~~L~~n~~~g~~~v~aVk~p~ 309 (401)
++ |+++++ +.++++++.+.|+|||||+++|+++++++|+.++ |++|
T Consensus 237 ~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~g------I~~v---- 306 (543)
T 3ruv_A 237 CAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEG------IVAA---- 306 (543)
T ss_dssp SCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTT------CEEE----
T ss_pred ccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcC------cEEE----
Confidence 94 677776 4566789999999999999999999999998765 5776
Q ss_pred ccccccccHHHHHHHhCCeEEecCCCCcccCCCCCCceeeeEEEEE---------------cCeEEEEccCCCHHHHHHH
Q 015737 310 FGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT---------------KDSTLIVTDGSTRAAVEKR 374 (401)
Q Consensus 310 ~~~~~~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG~~~~v~v~---------------~~~~tIi~~g~~~~~l~e~ 374 (401)
+++++++|+|||++|||++++ +++++++++||+|+.|++. +..|||++||+++..++|+
T Consensus 307 -~~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~TI~lrG~te~~l~E~ 380 (543)
T 3ruv_A 307 -RRVKKSDMEKLAKATGANVIA-----AIAALSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEHVIEEV 380 (543)
T ss_dssp -CSCCHHHHHHHHHHHCCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHH
T ss_pred -eeCCHHHHHHHHHHhCCceec-----ccccCCHHHCCcccEEEEEEeCCceEEEEECCCCCceeEEEecCCCHHHHHHH
Confidence 567899999999999999999 4899999999999999975 4689999999999999999
Q ss_pred HHHHHHHHHHH
Q 015737 375 ISEIRSLAEVV 385 (401)
Q Consensus 375 ~~~l~~~l~~~ 385 (401)
+|.++|+|..+
T Consensus 381 kr~l~DAl~~~ 391 (543)
T 3ruv_A 381 ARAVDDAVGVV 391 (543)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999743
No 11
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=6e-69 Score=561.37 Aligned_cols=326 Identities=19% Similarity=0.314 Sum_probs=300.0
Q ss_pred ceeeecCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEEecchHHHhccccccCcccchHHHHHHHHHhc
Q 015737 31 VKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGAR 110 (401)
Q Consensus 31 ~k~i~~g~~~~a~~~~~~~~~~la~~v~ttlGP~G~~kmI~~~~g~~~iTnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 110 (401)
.|+..|| +++|..|+.||+.++++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |||++++|++
T Consensus 11 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~ 84 (528)
T 3p9d_D 11 FKNKEKP--QEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPV----ARMLVEVSAA 84 (528)
T ss_dssp SCBCCCH--HHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTT----HHHHHHHHHH
T ss_pred cchhcch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHH----HHHHHHHHHH
Confidence 6778899 899999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCCcchHHHHHHHHHHhhHHHHHcCCChhhHHHHHHHHHHHHHHHHhccccccc--hh-hhHhhhhhccCC----
Q 015737 111 TNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVE--DH-ELADVAAVSAGN---- 183 (401)
Q Consensus 111 qd~~~GDGTTt~vvLa~~LL~~~~~li~~G~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~~---- 183 (401)
||+++||||||++|||++||+++.+++++|+||+.|++||++|.+.++++|+++++|++ +. +|.++|+||+++
T Consensus 85 qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~sK~~~ 164 (528)
T 3p9d_D 85 QDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVS 164 (528)
T ss_dssp HHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCSSSCS
T ss_pred hhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999987 44 899999999975
Q ss_pred --chhHHHHHHHHHHhhcc--CCcEEe-------eCCCCccceeEEEeceEEeecccCcccccccccceeEeeCceEEEe
Q 015737 184 --DYTVGKMISDALQQVGR--NGVVTI-------EKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLV 252 (401)
Q Consensus 184 --~~~la~li~~Av~~v~~--~g~I~i-------~~G~~~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~Ill~ 252 (401)
+++|+++++||+.++++ +|.|++ .+|++++|| ++++||+|+++|.|||| |+++++||+|+++
T Consensus 165 ~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~~------m~~~ien~kIll~ 237 (528)
T 3p9d_D 165 QYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDT-EMIDGVVLTQTAIKSAG------GPTRKEKAKIGLI 237 (528)
T ss_dssp TTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCC-EEESSCBCCCCCCCSSS------CCSEESSEEEEEE
T ss_pred hhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccce-EEEeeeEEeecccCccc------CcccccCceEEEE
Confidence 69999999999999987 454433 359999998 99999999999999975 8899999999999
Q ss_pred cccCC-------------CHHH-----------HHHHHHHHHHcCCCEEEEecCc-----chHHHHHHHHhcccCcceEE
Q 015737 253 DKKIK-------------NPKD-----------MFKILDSAVKEKYPIVIVAEDI-----EQQALALLIRNKLRGVLKAA 303 (401)
Q Consensus 253 d~~I~-------------~~~~-----------i~~~le~i~~~g~~lvIi~~~I-----~~~al~~L~~n~~~g~~~v~ 303 (401)
|++|+ ++++ +.++++++.+.|+||||++++| +++++++|..++ |+
T Consensus 238 ~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~------I~ 311 (528)
T 3p9d_D 238 QFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLN------IM 311 (528)
T ss_dssp CCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTS------CC
T ss_pred eccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcC------cE
Confidence 99865 5554 5678999999999999999999 999999999876 57
Q ss_pred EEecCCccccccccHHHHHHHhCCeEEecCCCCcccCCCCCCceeeeEEEEE------------------cCeEEEEccC
Q 015737 304 AIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT------------------KDSTLIVTDG 365 (401)
Q Consensus 304 aVk~p~~~~~~~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG~~~~v~v~------------------~~~~tIi~~g 365 (401)
||| ++++++|+|||++|||+++++ ++++++++||+|+.|++. ...|||++||
T Consensus 312 av~-----~~~k~~le~ia~~tGa~ii~~-----~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~~~~tI~lrG 381 (528)
T 3p9d_D 312 VVK-----DIEREEIEFLSKGLGCKPIAD-----IELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNNARPTVSVVIRG 381 (528)
T ss_dssp EEE-----CCCTHHHHHHHHHHTCCCCSC-----STTCCSSSEEEESCEECCEETTEECCBCTTBCCGGGCCCCEEECCC
T ss_pred EEE-----eCCHHHHHHHHHHHCCEEecc-----cccCCHHHCCcccEEEEEEECCEEEEEEEcccccCCCceEEEEEcC
Confidence 875 677999999999999999995 789999999999999864 2479999999
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q 015737 366 STRAAVEKRISEIRSLAEVV 385 (401)
Q Consensus 366 ~~~~~l~e~~~~l~~~l~~~ 385 (401)
+++..++|++|.++|+|..+
T Consensus 382 ~te~~l~E~kr~i~DAl~~~ 401 (528)
T 3p9d_D 382 ANNMIIDETERSLHDALCVI 401 (528)
T ss_dssp SSTTHHHHHHHHHTTTHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999743
No 12
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=8.9e-68 Score=551.02 Aligned_cols=322 Identities=21% Similarity=0.289 Sum_probs=295.9
Q ss_pred eeeecCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCC--CCcEEecchHHHhccccccCcccchHHHHHHHHHh
Q 015737 32 KEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKY--GPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGA 109 (401)
Q Consensus 32 k~i~~g~~~~a~~~~~~~~~~la~~v~ttlGP~G~~kmI~~~~--g~~~iTnDG~TIlk~i~~~hP~~~~gakll~~~a~ 109 (401)
.+-.|| .++|..|+.||+.++++|+|||||+||||||+++. |+|+|||||+||||+|+++||+ |||++++|+
T Consensus 3 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~----Akll~e~a~ 76 (513)
T 3iyg_B 3 ADEERA--ETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPA----AKVLVDMSR 76 (513)
T ss_pred cchhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHH----HHHHHHHHH
Confidence 345678 89999999999999999999999999999999999 9999999999999999999998 999999999
Q ss_pred ccccccCCCcchHHHHHHHHHHhhHHHHHcCCChhhHHHHHHHHHHHHHHHHhccccccc-----hh-hhHhhhhhccC-
Q 015737 110 RTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVE-----DH-ELADVAAVSAG- 182 (401)
Q Consensus 110 ~qd~~~GDGTTt~vvLa~~LL~~~~~li~~G~~p~~I~~g~~~a~~~~~~~L~~~s~~v~-----~~-~l~~va~ts~~- 182 (401)
+||+++||||||++|||++||+++.+++++|+||+.|++||++|.+.++++|+++++|++ +. +|.++|+||++
T Consensus 77 ~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslss 156 (513)
T 3iyg_B 77 VQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSS 156 (513)
T ss_pred HhhhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhcc
Confidence 999999999999999999999999999999999999999999999999999999999986 33 79999998875
Q ss_pred -----CchhHHHHHHHHHHhhccC---CcEEee--CCCCccceeEEEeceEEeecccCcccccccccceeEeeCceEEEe
Q 015737 183 -----NDYTVGKMISDALQQVGRN---GVVTIE--KGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLV 252 (401)
Q Consensus 183 -----~~~~la~li~~Av~~v~~~---g~I~i~--~G~~~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~Ill~ 252 (401)
+++.|+++++||+.+++++ +.|+++ .|++++|| ++++||+|+++|.|| |+++++||+|+++
T Consensus 157 K~~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds-~lv~G~v~dk~~~~~--------m~~~~en~kIll~ 227 (513)
T 3iyg_B 157 KLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADS-YLDEGFLLDKKIGVN--------QPKRIENAKILIA 227 (513)
T ss_pred cccccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccce-eEEeeEEEeccccCC--------CceeecCceEEEE
Confidence 4689999999999999987 777654 69999999 999999999999876 7889999999999
Q ss_pred cc--------------cCCCHHHHHH-----------HHHHHHHcCCCEEEEecCcchHHHHHHHHhcccCcceEEEEec
Q 015737 253 DK--------------KIKNPKDMFK-----------ILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKA 307 (401)
Q Consensus 253 d~--------------~I~~~~~i~~-----------~le~i~~~g~~lvIi~~~I~~~al~~L~~n~~~g~~~v~aVk~ 307 (401)
|+ +|++++++.+ +++++.+.|+||||++++|+++++++|..++ |+|||+
T Consensus 228 ~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~~------I~av~~ 301 (513)
T 3iyg_B 228 NTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAG------VMAIEH 301 (513)
T ss_pred cCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHcC------ceEEec
Confidence 98 4677877765 5789999999999999999999999998765 699987
Q ss_pred CCccccccccHHHHHHHhCCeEEecCCCCcccCCCCCCceeeeEEEEE---------------cCeEEEEccCCCHHHHH
Q 015737 308 PAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT---------------KDSTLIVTDGSTRAAVE 372 (401)
Q Consensus 308 p~~~~~~~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG~~~~v~v~---------------~~~~tIi~~g~~~~~l~ 372 (401)
|+ +.+|+|||++|||++++ +++++++++||+|+.|++. ...|||++||+++..++
T Consensus 302 ~~-----~~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~t~~~l~ 371 (513)
T 3iyg_B 302 AD-----FVGVERLALVTGGEIAS-----TFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILD 371 (513)
T ss_pred CC-----HHHHHHHHHHhCCEEec-----ccccCCHhHCCcccEEEEEEECCeEEEEEecCCCCceEEEEecCCCHHHHH
Confidence 75 57899999999999999 4899999999999999843 35899999999999999
Q ss_pred HHHHHHHHHHHH
Q 015737 373 KRISEIRSLAEV 384 (401)
Q Consensus 373 e~~~~l~~~l~~ 384 (401)
|++|.++|+|..
T Consensus 372 E~kr~l~DAl~~ 383 (513)
T 3iyg_B 372 EAERSLHDALCV 383 (513)
T ss_pred HHHHHHHHHHHH
Confidence 999999999973
No 13
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=8.2e-68 Score=551.30 Aligned_cols=320 Identities=20% Similarity=0.322 Sum_probs=293.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEEecchHHHhccccccCcccchHHHHHHHHHhccccccCCCc
Q 015737 40 GSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGARTNDLAGDGC 119 (401)
Q Consensus 40 ~~a~~~~~~~~~~la~~v~ttlGP~G~~kmI~~~~g~~~iTnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGT 119 (401)
.+++..|+.+|+.++++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |||++++|++||+++||||
T Consensus 10 ~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~~~GDGT 85 (515)
T 3iyg_H 10 IPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPA----AKTLVDIAKSQDAEVGDGT 85 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHH----HHHHHHHHHHhhceeCcch
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHhhHHHHHcCCChhhHHHHHHHHHHHHHHHHhccccccc--h----h-hhHhhhhhccC------Cchh
Q 015737 120 TTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVE--D----H-ELADVAAVSAG------NDYT 186 (401)
Q Consensus 120 Tt~vvLa~~LL~~~~~li~~G~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~----~-~l~~va~ts~~------~~~~ 186 (401)
||++|||++||+++.+++++|+||+.|++||++|.+.++++|+++++|++ + . .|.++|+||++ +++.
T Consensus 86 TtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~ 165 (515)
T 3iyg_H 86 TSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAF 165 (515)
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHH
Confidence 99999999999999999999999999999999999999999999999984 3 3 57999999875 5789
Q ss_pred HHHHHHHHHHhhccC---CcEEee--CCCCccceeEEEeceEEeecccCcccccccccceeEeeCceEEEeccc------
Q 015737 187 VGKMISDALQQVGRN---GVVTIE--KGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKK------ 255 (401)
Q Consensus 187 la~li~~Av~~v~~~---g~I~i~--~G~~~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~Ill~d~~------ 255 (401)
|+++++||+.+++.+ +.|+++ +|+++.|+ ++++||+|+++|.||||.+ +|.+++||+|+++|++
T Consensus 166 i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~p~~~~----~p~~~en~kIll~~~~Le~~k~ 240 (515)
T 3iyg_H 166 FAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEES-QLVAGVAFKKTFSYAGFEM----QPKKYHNPMIALLNVELELKAE 240 (515)
T ss_pred HHHHHHHHHHHhcccCCcceEEEEecCCCCccce-EEEeeeEEecCccCccccc----CCccccccEEEEEccccccccc
Confidence 999999999999865 666654 68899999 9999999999999999864 5668999999999994
Q ss_pred -------CCCHHHH-----------HHHHHHHHHcCCCEEEEecCcchHHHHHHHHhcccCcceEEEEecCCcccccccc
Q 015737 256 -------IKNPKDM-----------FKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHY 317 (401)
Q Consensus 256 -------I~~~~~i-----------~~~le~i~~~g~~lvIi~~~I~~~al~~L~~n~~~g~~~v~aVk~p~~~~~~~~~ 317 (401)
|++++++ .++++++.+.|+||||++++|++.++++|..++ |+++ +++++++
T Consensus 241 e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~g------I~~v-----~~~~k~~ 309 (515)
T 3iyg_H 241 KDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRD------MFCA-----GRVPEED 309 (515)
T ss_pred ccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHcC------Cccc-----ccccHHH
Confidence 7788876 455889999999999999999999998887654 4564 7889999
Q ss_pred HHHHHHHhCCeEEecCCCCcccCCCCCCceeeeEEEEE---------------cCeEEEEccCCCHHHHHHHHHHHHHHH
Q 015737 318 LDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT---------------KDSTLIVTDGSTRAAVEKRISEIRSLA 382 (401)
Q Consensus 318 Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG~~~~v~v~---------------~~~~tIi~~g~~~~~l~e~~~~l~~~l 382 (401)
|+|||++|||+++++ ++++++++||+|+.|++. +..|||++||+++..++|++|.++|+|
T Consensus 310 leria~~tGa~ii~~-----l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~t~~~l~E~kr~i~DAl 384 (515)
T 3iyg_H 310 LKRTMMACGGSIQTS-----VNALSSDVLGRCQVFEETQIGGERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAI 384 (515)
T ss_pred HHHHHHHhCCEEeec-----cccCCHHHCCcccEEEEEEEcCeEEEEEecCCCCceEEEEEeCCcHHHHHHHHHHHHHHH
Confidence 999999999999994 899999999999999875 468999999999999999999999999
Q ss_pred HH
Q 015737 383 EV 384 (401)
Q Consensus 383 ~~ 384 (401)
..
T Consensus 385 ~~ 386 (515)
T 3iyg_H 385 MI 386 (515)
T ss_pred HH
Confidence 73
No 14
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.3e-67 Score=547.05 Aligned_cols=339 Identities=19% Similarity=0.268 Sum_probs=301.5
Q ss_pred eeecCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEEecchHHHhccccccCcccchHHHHHHHHHhccc
Q 015737 33 EVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGARTN 112 (401)
Q Consensus 33 ~i~~g~~~~a~~~~~~~~~~la~~v~ttlGP~G~~kmI~~~~g~~~iTnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd 112 (401)
+-.|| .++|..|+.||+.++++|+|||||+||+|||+++.|+++|||||+||||+|+++||+ |||++++|++||
T Consensus 4 ~~~~g--~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd 77 (529)
T 3iyg_A 4 DRSTG--EAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPA----AKVLCELADLQD 77 (529)
T ss_pred chhch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChH----HHHHHHHHHHhh
Confidence 45678 899999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCCCcchHHHHHHHHHHhhHHHHHcCCChhhHHHHHHHHHHHHHHHHhc-cccccc--hh-hhHhhhhhccC------
Q 015737 113 DLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKL-TSREVE--DH-ELADVAAVSAG------ 182 (401)
Q Consensus 113 ~~~GDGTTt~vvLa~~LL~~~~~li~~G~~p~~I~~g~~~a~~~~~~~L~~-~s~~v~--~~-~l~~va~ts~~------ 182 (401)
+++||||||++|||++||+++.+++++|+||+.|++||++|.+.++++|++ ++++++ +. +|.++|+||++
T Consensus 78 ~e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~ 157 (529)
T 3iyg_A 78 KEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGI 157 (529)
T ss_pred hhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccc
Confidence 999999999999999999999999999999999999999999999999999 999987 34 89999999985
Q ss_pred CchhHHHHHHHHHHhhc---cCC-----c--EE--eeCCCCccceeEEEeceEEeecccCcccccccccceeEeeCceEE
Q 015737 183 NDYTVGKMISDALQQVG---RNG-----V--VT--IEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLL 250 (401)
Q Consensus 183 ~~~~la~li~~Av~~v~---~~g-----~--I~--i~~G~~~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~Il 250 (401)
++++|+++++||+.+++ ++| . |+ ..+|++++|| ++++|++|+++|.||| |+++++||+|+
T Consensus 158 ~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIl 229 (529)
T 3iyg_A 158 NGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMES-MLINGYALNCVVGSQG-------MPKRIVNAKIA 229 (529)
T ss_pred cHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccce-EEEeeeEEecCccccc-------CCcccCCceEE
Confidence 46899999999999997 344 2 44 3589999999 9999999999999996 77889999999
Q ss_pred EecccC-------------CCHHH-----------HHHHHHHHHHcCCCEEEEecCcchHHHHHHHHhcccCcceEEEEe
Q 015737 251 LVDKKI-------------KNPKD-----------MFKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIK 306 (401)
Q Consensus 251 l~d~~I-------------~~~~~-----------i~~~le~i~~~g~~lvIi~~~I~~~al~~L~~n~~~g~~~v~aVk 306 (401)
++|+++ +++++ +.+++++|.+.|+||||++++|+++++++|+.|+ |+||
T Consensus 230 ll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~g------I~av- 302 (529)
T 3iyg_A 230 CLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAG------AMAV- 302 (529)
T ss_pred EecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC------Ccee-
Confidence 999964 44544 4456889999999999999999999999999996 5786
Q ss_pred cCCccccccccHHHHHHHhCCeEEecCCCCc-ccCCCCCCceeeeEEEEE---------------cCeEEEEccCCCHHH
Q 015737 307 APAFGERKSHYLDDIAILTGGLVIRDEMGLT-LDKAGKEVLGTAIKVVIT---------------KDSTLIVTDGSTRAA 370 (401)
Q Consensus 307 ~p~~~~~~~~~Le~Ia~~tGa~~i~~~~g~~-~~~~~~~~LG~~~~v~v~---------------~~~~tIi~~g~~~~~ 370 (401)
+++++++|+|||++|||+++++..+++ .+++++++||+|+.|++. +..|||++||+++..
T Consensus 303 ----~~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~ 378 (529)
T 3iyg_A 303 ----RRVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKARTSASVILRGANDFM 378 (529)
T ss_pred ----ccCCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCCceEEEEECCchHHH
Confidence 578899999999999999999765555 355778999999999842 468999999999999
Q ss_pred HHHHHHHHHHHHHHHh-----------cccceeeehh
Q 015737 371 VEKRISEIRSLAEVVL-----------LVSFYIVLVH 396 (401)
Q Consensus 371 l~e~~~~l~~~l~~~~-----------~~~~~~~~~~ 396 (401)
++|.+|.++|+|..+- .|.+|+.+++
T Consensus 379 l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~ 415 (529)
T 3iyg_A 379 CDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSI 415 (529)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHH
Confidence 9999999999997332 5566665543
No 15
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.1e-66 Score=540.92 Aligned_cols=317 Identities=21% Similarity=0.327 Sum_probs=292.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEEecchHHHhccccccCcccchHHHHHHHHHhccccccCCCc
Q 015737 40 GSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGARTNDLAGDGC 119 (401)
Q Consensus 40 ~~a~~~~~~~~~~la~~v~ttlGP~G~~kmI~~~~g~~~iTnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGT 119 (401)
.++|..|+.+|+.++++|||||||+||||||+++.|+++|||||+|||++|+++||+ |||++++|++||+++||||
T Consensus 8 ~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGT 83 (515)
T 3iyg_G 8 RKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPA----AKSMIEISRTQDEEVGDGT 83 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHH----HHHHHHHHHHhhhhhCCCh
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHhhHHHHHcCCChhhHHHHHHHHHHHHHHHHhccccccch--h-hhHhhhhhccCC------chhHHHH
Q 015737 120 TTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVED--H-ELADVAAVSAGN------DYTVGKM 190 (401)
Q Consensus 120 Tt~vvLa~~LL~~~~~li~~G~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~--~-~l~~va~ts~~~------~~~la~l 190 (401)
||+||||++||+++.+++++|+||+.|++||++|.+.++++|+++++|++. . .|.++|+||+++ .+.++++
T Consensus 84 TtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i 163 (515)
T 3iyg_G 84 TSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKVISRWSSLACNI 163 (515)
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999874 3 899999999875 3677899
Q ss_pred HHHHHHhhccC--C----------cEEeeCCCCccceeEEEeceEEeecccCcccccccccceeEeeCceEEEecc----
Q 015737 191 ISDALQQVGRN--G----------VVTIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDK---- 254 (401)
Q Consensus 191 i~~Av~~v~~~--g----------~I~i~~G~~~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~Ill~d~---- 254 (401)
++||+..+.++ + .|.+.+|++++|+ ++++||+|+++|.||+ |+++++||+|+++|+
T Consensus 164 ~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~~~~Le~ 235 (515)
T 3iyg_G 164 ALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDS-CVLRGVMINKDVTHPR-------MRRYIKNPRIVLLDSSLEY 235 (515)
T ss_pred HHHHHHhcccccCCCcccchhheeEEEEecCCCcccc-eEEeeEEEeCCCCCCC-------CcceeeeeEEEEEcccccc
Confidence 99999988732 2 1334589999999 9999999999999984 899999999999999
Q ss_pred ---------cCCCHHHHHHHHH-----------HHHHcCCCEEEEecCcchHHHHHHHHhcccCcceEEEEecCCccccc
Q 015737 255 ---------KIKNPKDMFKILD-----------SAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERK 314 (401)
Q Consensus 255 ---------~I~~~~~i~~~le-----------~i~~~g~~lvIi~~~I~~~al~~L~~n~~~g~~~v~aVk~p~~~~~~ 314 (401)
.|++++++.++++ ++.+.|++|||++++|++.++++|..++ |+|| ++++
T Consensus 236 ~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~------I~av-----~~~~ 304 (515)
T 3iyg_G 236 KKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRAN------ITAI-----RRVR 304 (515)
T ss_pred cccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHCC------ceee-----ccCC
Confidence 5788899888776 8899999999999999999999998765 5775 7889
Q ss_pred cccHHHHHHHhCCeEEecCCCCcccCCCCCCcee-eeEEEEE---------------cCeEEEEccCCCHHHHHHHHHHH
Q 015737 315 SHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGT-AIKVVIT---------------KDSTLIVTDGSTRAAVEKRISEI 378 (401)
Q Consensus 315 ~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG~-~~~v~v~---------------~~~~tIi~~g~~~~~l~e~~~~l 378 (401)
+++|+|||++|||+++++ ++++++++||+ |+.|++. +..|||++||+++..++|++|.+
T Consensus 305 k~~leria~~tGa~ii~~-----l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~~~~TIllrG~t~~~l~E~er~i 379 (515)
T 3iyg_G 305 KTDNNRIARACGARIVSR-----PEELREEDVGTGAGLLEIKKIGDEYFTFITECKDPKACTILLRGASKEILSEVERNL 379 (515)
T ss_pred HHHHHHHHHHhCCeeecc-----ccccChhhcCCcccEEEEEEECCceEEEEeCCCCCCeEEEEEcCCCHHHHHHHHHHH
Confidence 999999999999999995 89999999999 9999864 46899999999999999999999
Q ss_pred HHHHHH
Q 015737 379 RSLAEV 384 (401)
Q Consensus 379 ~~~l~~ 384 (401)
+|+|..
T Consensus 380 ~Dal~~ 385 (515)
T 3iyg_G 380 QDAMQV 385 (515)
T ss_pred HHHHHH
Confidence 999973
No 16
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2e-66 Score=541.29 Aligned_cols=323 Identities=22% Similarity=0.353 Sum_probs=293.2
Q ss_pred eeeecCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEEecchHHHhccccccCcccchHHHHHHHHHhcc
Q 015737 32 KEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGART 111 (401)
Q Consensus 32 k~i~~g~~~~a~~~~~~~~~~la~~v~ttlGP~G~~kmI~~~~g~~~iTnDG~TIlk~i~~~hP~~~~gakll~~~a~~q 111 (401)
++..|| .+||..|+.||+.++++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |||++++|++|
T Consensus 3 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~----Akll~~~a~~q 76 (515)
T 3iyg_E 3 KSRLMG--LEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQI----AKLMVELSKSQ 76 (515)
T ss_pred chhhch--HHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHH----HHHHHHHHHHh
Confidence 345678 899999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred ccccCCCcchHHHHHHHHHHhhHHHHHcCCChhhHHHHHHHHHHHHHHHHhccccccch----h-hhHhhhhhccCC---
Q 015737 112 NDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVED----H-ELADVAAVSAGN--- 183 (401)
Q Consensus 112 d~~~GDGTTt~vvLa~~LL~~~~~li~~G~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~----~-~l~~va~ts~~~--- 183 (401)
|+++||||||++|||++||+++.+++++|+||+.|++||++|.+.++++|+++++|++. . +|.++|+||+++
T Consensus 77 d~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i 156 (515)
T 3iyg_E 77 DDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVV 156 (515)
T ss_pred hhhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccch
Confidence 99999999999999999999999999999999999999999999999999999988753 3 799999999976
Q ss_pred ---chhHHHHHHHHHHhhccC-------CcEE--eeCCCCccceeEEEeceEEeecccCcccccccccceeEeeCceEEE
Q 015737 184 ---DYTVGKMISDALQQVGRN-------GVVT--IEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLL 251 (401)
Q Consensus 184 ---~~~la~li~~Av~~v~~~-------g~I~--i~~G~~~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~Ill 251 (401)
.+.|+++++||+..+.+. +.|+ ..+|++++|+ ++++||+|+++|.||| |++.++||+|++
T Consensus 157 ~~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lv~G~~~dk~~~~~~-------m~~~~~~~kIal 228 (515)
T 3iyg_E 157 NSCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDT-KLIKGVIVDKDFSHPQ-------MPKQVEDAKIAI 228 (515)
T ss_pred hHHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccc-eEEeeEEEeccccccc-------ccccCCCceEEE
Confidence 478999999999998642 2344 4579999999 9999999999999997 666778899999
Q ss_pred eccc-------------CCCHHHH-----------HHHHHHHHHcCCCEEEEecCcchHHHHHHHHhcccCcceEEEEec
Q 015737 252 VDKK-------------IKNPKDM-----------FKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKA 307 (401)
Q Consensus 252 ~d~~-------------I~~~~~i-----------~~~le~i~~~g~~lvIi~~~I~~~al~~L~~n~~~g~~~v~aVk~ 307 (401)
++++ |++++++ .++++++.+.|+||||++++|+++|+++|+.|++ ++|+
T Consensus 229 l~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I------~~v~- 301 (515)
T 3iyg_E 229 LTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDL------PAVR- 301 (515)
T ss_pred EcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCC------EEEe-
Confidence 8875 5677776 5678899999999999999999999999999975 6664
Q ss_pred CCccccccccHHHHHHHhCCeEEecCCCCcccCCCCCCceeeeEEEE-----E------------cCeEEEEccCCCHHH
Q 015737 308 PAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVI-----T------------KDSTLIVTDGSTRAA 370 (401)
Q Consensus 308 p~~~~~~~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG~~~~v~v-----~------------~~~~tIi~~g~~~~~ 370 (401)
++++.+|+|||++|||++++ +++++++++||+|+.|++ + +..|||++||+++..
T Consensus 302 ----~v~k~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~~~~tI~lrG~te~~ 372 (515)
T 3iyg_E 302 ----WVGGPEIELIAIATGGRIVP-----RFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMI 372 (515)
T ss_pred ----ccCHHHHHHHHHHhCCEEec-----ccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCCceEEEEEeCCcHHH
Confidence 56799999999999999999 489999999999999987 2 467899999999999
Q ss_pred HHHHHHHHHHHHHH
Q 015737 371 VEKRISEIRSLAEV 384 (401)
Q Consensus 371 l~e~~~~l~~~l~~ 384 (401)
++|++|.++|+|..
T Consensus 373 l~E~kr~i~DAl~~ 386 (515)
T 3iyg_E 373 IEEAKRSLHDALCV 386 (515)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999973
No 17
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.6e-66 Score=540.57 Aligned_cols=321 Identities=22% Similarity=0.316 Sum_probs=292.0
Q ss_pred eeecCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEEecchHHHhccccccCcccchHHHHHHHHHhccc
Q 015737 33 EVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGARTN 112 (401)
Q Consensus 33 ~i~~g~~~~a~~~~~~~~~~la~~v~ttlGP~G~~kmI~~~~g~~~iTnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd 112 (401)
+-.+| .++|..|+.||+.++++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |||++++|++||
T Consensus 5 ~~~~g--~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd 78 (518)
T 3iyg_D 5 DRDKP--AQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPA----ARMLVELSKAQD 78 (518)
T ss_pred cchhh--HHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHH----HHHHHHHHHHhh
Confidence 34556 789999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCCCcchHHHHHHHHHHhhHHHHHcCCChhhHHHHHHHHHHHHHHHHhccccccc--hh-hhHhhhhhccCCc-----
Q 015737 113 DLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVE--DH-ELADVAAVSAGND----- 184 (401)
Q Consensus 113 ~~~GDGTTt~vvLa~~LL~~~~~li~~G~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~~~----- 184 (401)
+++||||||++|||++||+++.+++++|+||+.|++||++|.+.++++|+++++|++ +. +|.++|+||++++
T Consensus 79 ~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~ 158 (518)
T 3iyg_D 79 IEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQY 158 (518)
T ss_pred hhhCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhh
Confidence 999999999999999999999999999999999999999999999999999999987 44 8999999999875
Q ss_pred -hhHHHHHHHHHHhhcc---CCc-----EEee--CCCCccceeEEEeceEEeecccCcccccccccceeEeeCceEEEec
Q 015737 185 -YTVGKMISDALQQVGR---NGV-----VTIE--KGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVD 253 (401)
Q Consensus 185 -~~la~li~~Av~~v~~---~g~-----I~i~--~G~~~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~Ill~d 253 (401)
+.|+++++||+.++++ +|. |+++ .|++..|+ ++++||+|+++|.| . ||..++||+|++++
T Consensus 159 ~~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~-~-------mp~~i~n~kIlll~ 229 (518)
T 3iyg_D 159 SSLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDC-ELVEGLVLTQKVAN-S-------GITRVEKAKIGLIQ 229 (518)
T ss_pred HHHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhh-eEeccEEEeccccc-C-------CCccccCceEEEEE
Confidence 8999999999999985 454 5543 78999998 99999999999987 2 67788999999999
Q ss_pred ccC-------------CCHHH-----------HHHHHHHHHHcCCCEEEE-----ecCcchHHHHHHHHhcccCcceEEE
Q 015737 254 KKI-------------KNPKD-----------MFKILDSAVKEKYPIVIV-----AEDIEQQALALLIRNKLRGVLKAAA 304 (401)
Q Consensus 254 ~~I-------------~~~~~-----------i~~~le~i~~~g~~lvIi-----~~~I~~~al~~L~~n~~~g~~~v~a 304 (401)
+++ +++++ +.++++++.+.|+||||+ +++|+++++++|+.++ |+|
T Consensus 230 ~~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~~------I~a 303 (518)
T 3iyg_D 230 FCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMK------IMV 303 (518)
T ss_pred eeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHcC------cEE
Confidence 864 45553 567789999999999999 8999999999999885 699
Q ss_pred EecCCccccccccHHHHHHHhCCeEEecCCCCcccCCCCCCceeeeEEEEE-----------------cCeEEEEccCCC
Q 015737 305 IKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT-----------------KDSTLIVTDGST 367 (401)
Q Consensus 305 Vk~p~~~~~~~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG~~~~v~v~-----------------~~~~tIi~~g~~ 367 (401)
||+|+ +.+|+|||++|||+++++ ++++++++||+|+.|++. ...|||++||++
T Consensus 304 v~~~~-----~~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~~~~~~tI~lrG~t 373 (518)
T 3iyg_D 304 VKDIE-----REDIEFICKTIGTKPVAH-----VDQFTADMLGSAELAEEVSLNGSGKLIKITGCASPGKTVTIVVRGSN 373 (518)
T ss_pred EecCC-----HHHHHHHHHHhCCEEecc-----cccCCHHHCCcCcEEEEEEeCCCceEEEEECCCCCCceEEEEECCCC
Confidence 88765 578999999999999995 899999999999998763 357899999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 015737 368 RAAVEKRISEIRSLAEV 384 (401)
Q Consensus 368 ~~~l~e~~~~l~~~l~~ 384 (401)
+..++|++|.++|+|..
T Consensus 374 e~~l~E~kr~l~DAl~~ 390 (518)
T 3iyg_D 374 KLVIEEAERSIHDALCV 390 (518)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999999973
No 18
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=2e-67 Score=552.05 Aligned_cols=327 Identities=20% Similarity=0.278 Sum_probs=295.4
Q ss_pred ceeeecCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEEecchHHHhccccccCcccchHHHHHHHHHhc
Q 015737 31 VKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGAR 110 (401)
Q Consensus 31 ~k~i~~g~~~~a~~~~~~~~~~la~~v~ttlGP~G~~kmI~~~~g~~~iTnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 110 (401)
+.+..+| .++|..|+.||+.|+++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |||++++|++
T Consensus 16 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~----Akll~e~a~~ 89 (550)
T 3p9d_G 16 GTDASQG--KGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPA----AKTLVDISRA 89 (550)
T ss_dssp CCCEEES--HHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSHH----HHHHHHHHHH
T ss_pred Ccchhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCHH----HHHHHHHHHH
Confidence 3456678 799999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCCcchHHHHHHHHHHhhHHHHHcCCChhhHHHHHHHHHHHHHHHHhccccccch-----h-hhHhhhhhccC--
Q 015737 111 TNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVED-----H-ELADVAAVSAG-- 182 (401)
Q Consensus 111 qd~~~GDGTTt~vvLa~~LL~~~~~li~~G~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~-----~-~l~~va~ts~~-- 182 (401)
||+++||||||++|||++||+++.+++++|+||+.|++||++|.+.++++|++++++++. . +|.++|+||++
T Consensus 90 qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK 169 (550)
T 3p9d_G 90 QDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCARTAMSSK 169 (550)
T ss_dssp HHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHHHHHHHHHT
T ss_pred hhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHHhccCc
Confidence 999999999999999999999999999999999999999999999999999999998852 4 79999999864
Q ss_pred ----CchhHHHHHHHHHHhhcc-C------CcEEeeCCCCccceeEEEeceEEeecccCcccccccccceeEeeCceEEE
Q 015737 183 ----NDYTVGKMISDALQQVGR-N------GVVTIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLL 251 (401)
Q Consensus 183 ----~~~~la~li~~Av~~v~~-~------g~I~i~~G~~~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~Ill 251 (401)
+++.|+++++||+.++++ + +.+++ +|++++|| ++++||+|+++|.||||.+ |+.+++||+|++
T Consensus 170 ~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv-~Gg~~~ds-~lv~G~~~dk~~~s~yf~~----~~~~~en~kIll 243 (550)
T 3p9d_G 170 LIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKI-PGGAMEES-LFINGVAFKKTFSYAGFEQ----QPKKFNNPKILS 243 (550)
T ss_dssp TTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBC-CSSCGGGC-CCCSSEEECCCSSCTTCSC----SCSCCSSCCEEE
T ss_pred cccccHhHHHHHHHHHHHHhCccccCchheeEEEe-cCCCccce-eEEeeEEEecccccccccc----CcccccCceEEE
Confidence 478999999999999984 3 44444 69999999 9999999999999999864 666799999999
Q ss_pred eccc-------------CCCHHHHHH-----------HHHHHHHcCCCEEEEecCcchHHHHHHHHhcccCcceEEEEec
Q 015737 252 VDKK-------------IKNPKDMFK-----------ILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKA 307 (401)
Q Consensus 252 ~d~~-------------I~~~~~i~~-----------~le~i~~~g~~lvIi~~~I~~~al~~L~~n~~~g~~~v~aVk~ 307 (401)
+|++ |++++++.+ ++++|.+.|++|||++++|++.++++|..++ |+++
T Consensus 244 ~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~g------I~~v-- 315 (550)
T 3p9d_G 244 LNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRN------IFCA-- 315 (550)
T ss_dssp ECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGT------CEEE--
T ss_pred eccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcC------Cccc--
Confidence 9997 567777665 5678899999999999999999999887654 4664
Q ss_pred CCccccccccHHHHHHHhCCeEEecCCCCcccCCCCCCceeeeEEEEE---------------cCeEEEEccCCCHHHHH
Q 015737 308 PAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT---------------KDSTLIVTDGSTRAAVE 372 (401)
Q Consensus 308 p~~~~~~~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG~~~~v~v~---------------~~~~tIi~~g~~~~~l~ 372 (401)
+++++++|+|||++|||++++ +++++++++||+|+.|++. +..|||++||+++..++
T Consensus 316 ---~~v~k~~lerIa~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~~~~tI~lrG~te~~l~ 387 (550)
T 3p9d_G 316 ---GRVSADDMNRVIQAVGGSIQS-----TTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQAKTCTLLLRGGAEQVIA 387 (550)
T ss_dssp ---ECCCTTHHHHHHHHTCCCCBS-----SGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTCCCCCCCBCSSSHHHHH
T ss_pred ---cCcCHHHHHHHHHHhCCceec-----chhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCCceeEEEEeCCcHHHHH
Confidence 788999999999999999999 4899999999999998863 24799999999999999
Q ss_pred HHHHHHHHHHHHH
Q 015737 373 KRISEIRSLAEVV 385 (401)
Q Consensus 373 e~~~~l~~~l~~~ 385 (401)
|++|.++|+|..+
T Consensus 388 E~kr~l~DAl~~~ 400 (550)
T 3p9d_G 388 EVERSLHDAIMIV 400 (550)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHH
Confidence 9999999999743
No 19
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=5e-66 Score=542.65 Aligned_cols=330 Identities=25% Similarity=0.377 Sum_probs=293.6
Q ss_pred eeeecCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEEecchHHHhccccccCcccchHHHHHHHHHhcc
Q 015737 32 KEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGART 111 (401)
Q Consensus 32 k~i~~g~~~~a~~~~~~~~~~la~~v~ttlGP~G~~kmI~~~~g~~~iTnDG~TIlk~i~~~hP~~~~gakll~~~a~~q 111 (401)
++..|| .+||..|+.||+.|+++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |||++++|++|
T Consensus 38 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~q 111 (562)
T 3p9d_E 38 KKRQHG--LEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEI----AKLLVQLSKSQ 111 (562)
T ss_dssp CSCSHH--HHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSHH----HHHHHHHHHHH
T ss_pred ceecch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCHH----HHHHHHHHHHH
Confidence 678899 899999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred ccccCCCcchHHHHHHHHHHhhHHHHHcCCChhhHHHHHHHHHHHHHHHHhccccccch-------hhhHhhhhhccCC-
Q 015737 112 NDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVED-------HELADVAAVSAGN- 183 (401)
Q Consensus 112 d~~~GDGTTt~vvLa~~LL~~~~~li~~G~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~-------~~l~~va~ts~~~- 183 (401)
|+++||||||++|||++||+++.+++++|+||+.|++||++|.+.++++|++++++++. ++|.++|+||+++
T Consensus 112 d~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~tSl~sK 191 (562)
T 3p9d_E 112 DDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGSK 191 (562)
T ss_dssp HHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHHHHSSS
T ss_pred HhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999999999999999999988853 2699999999875
Q ss_pred -----chhHHHHHHHHHHhhccC-------CcE--EeeCCCCccceeEEEeceEEeecccCcccccccccceeEeeCceE
Q 015737 184 -----DYTVGKMISDALQQVGRN-------GVV--TIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKL 249 (401)
Q Consensus 184 -----~~~la~li~~Av~~v~~~-------g~I--~i~~G~~~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~I 249 (401)
.+.|+++++||+..+.+. +.| ...+|++++|| ++++||+|+++|.||||.++.+ .+..++||+|
T Consensus 192 ~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lveGmv~dk~~~sp~m~~~~~-~~~~~~~~kI 269 (562)
T 3p9d_E 192 IVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDS-KLINGVILDKDFSHPQMPKCVL-PKEGSDGVKL 269 (562)
T ss_dssp TTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGC-EEESSEEESSCCCTTSCCC------TTCSSCEE
T ss_pred hhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhh-ceeeeEEEecCCCCCCcCcccc-cccccccceE
Confidence 478999999999998652 233 34589999999 9999999999999998544321 1112279999
Q ss_pred EEeccc-------------CCCHHH-----------HHHHHHHHHHcCCCEEEEecCcchHHHHHHHHhcccCcceEEEE
Q 015737 250 LLVDKK-------------IKNPKD-----------MFKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAI 305 (401)
Q Consensus 250 ll~d~~-------------I~~~~~-----------i~~~le~i~~~g~~lvIi~~~I~~~al~~L~~n~~~g~~~v~aV 305 (401)
++++++ |+++++ +.++++++.+.|+|||||+++|+++++++|+.|++ ++|
T Consensus 270 all~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I------~~v 343 (562)
T 3p9d_E 270 AILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDL------PAV 343 (562)
T ss_dssp CEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTC------CCE
T ss_pred EEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCC------EEE
Confidence 999875 456666 56789999999999999999999999999999986 455
Q ss_pred ecCCccccccccHHHHHHHhCCeEEecCCCCcccCCCCCCceeeeEEEEE-----------------cCeEEEEccCCCH
Q 015737 306 KAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT-----------------KDSTLIVTDGSTR 368 (401)
Q Consensus 306 k~p~~~~~~~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG~~~~v~v~-----------------~~~~tIi~~g~~~ 368 (401)
+ ++++++|+|||++|||+++++ ++++++++||+|+.|++. +..|||++||+++
T Consensus 344 ~-----~v~k~~le~ia~~TGa~iis~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~~~~TIllrG~te 413 (562)
T 3p9d_E 344 R-----WVGGQELEHIAISTNGRIVPR-----FQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKETKTVTCFVRGSNK 413 (562)
T ss_dssp E-----CCCTTTHHHHHHHHCCCEEES-----SSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCCSCCEEEEECTTT
T ss_pred e-----ccCHHHHHHHHHHhCCEEEec-----cccCCHHHCCcceEEEEEEeccCCceEEEEecCCCCCeEEEEEeCCCH
Confidence 4 557899999999999999994 899999999999999982 4678999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 015737 369 AAVEKRISEIRSLAEVV 385 (401)
Q Consensus 369 ~~l~e~~~~l~~~l~~~ 385 (401)
..++|++|.++|+|..+
T Consensus 414 ~~l~E~kr~i~DAL~~~ 430 (562)
T 3p9d_E 414 MIVDEAERALHDSLCVV 430 (562)
T ss_dssp TTHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999999743
No 20
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.1e-65 Score=533.29 Aligned_cols=315 Identities=18% Similarity=0.271 Sum_probs=286.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEEecchHHHhccccccCcccchHHHHHHHHHhccccccCCCc
Q 015737 40 GSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGARTNDLAGDGC 119 (401)
Q Consensus 40 ~~a~~~~~~~~~~la~~v~ttlGP~G~~kmI~~~~g~~~iTnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGT 119 (401)
+++|..|+.||+.++++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |||++++|++||+++||||
T Consensus 10 ~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~~~GDGT 85 (512)
T 3iyg_Q 10 EEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPA----AKMIVMASHMQEQEVGDGT 85 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHH----HHHHHHHHHHhhhhhCCCh
Confidence 589999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHhhHHHHHcCCChhhHHHHHHHHHHHHHHHHhcc----ccccchh-hhHhhhhhccCC-----chhHHH
Q 015737 120 TTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLT----SREVEDH-ELADVAAVSAGN-----DYTVGK 189 (401)
Q Consensus 120 Tt~vvLa~~LL~~~~~li~~G~~p~~I~~g~~~a~~~~~~~L~~~----s~~v~~~-~l~~va~ts~~~-----~~~la~ 189 (401)
||++|||++||+++.+++++|+||+.|++||++|.+.++++|+++ +.++++. +|.++|+||+++ +++|++
T Consensus 86 TtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~ 165 (512)
T 3iyg_Q 86 NFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGNEVFLAK 165 (512)
T ss_pred hHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCccchHHHHH
Confidence 999999999999999999999999999999999999999999998 4566666 899999999987 789999
Q ss_pred HHHHHHHhhccC-CcEE-------eeCCCCccceeEEEeceEEeecccCcccccccccceeEeeCceEEEeccc------
Q 015737 190 MISDALQQVGRN-GVVT-------IEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKK------ 255 (401)
Q Consensus 190 li~~Av~~v~~~-g~I~-------i~~G~~~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~Ill~d~~------ 255 (401)
+++||+.+++++ |.|+ +..|+++.|+ ++++||+|+++|.+ |++.++||+|++++++
T Consensus 166 livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds-~lv~G~~~dk~~~~---------~~~~~~n~kI~ll~~~le~~~~ 235 (512)
T 3iyg_Q 166 LIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSS-SVLHGMVFKKETEG---------DVTSVKDAKIAVYSCPFDGMIT 235 (512)
T ss_pred HHHHHHHHHhccCCcccHhHeeEeeccCCCcccc-eEEeeEEEecCcCC---------CCcccccCceEEEecccccccc
Confidence 999999999876 4433 3469999888 99999999999864 5677889999998875
Q ss_pred -------CCCHHHHHHH-------HH----HHHHcCCCEEEEecCcchHHHHHHHHhcccCcceEEEEecCCcccccccc
Q 015737 256 -------IKNPKDMFKI-------LD----SAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHY 317 (401)
Q Consensus 256 -------I~~~~~i~~~-------le----~i~~~g~~lvIi~~~I~~~al~~L~~n~~~g~~~v~aVk~p~~~~~~~~~ 317 (401)
|++++++.++ ++ ++.+.|+||||++++|++.++++|..+ +|+|||.|+ +.+
T Consensus 236 e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~------~I~av~~~~-----~~d 304 (512)
T 3iyg_Q 236 ETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKY------NIMLVRLNS-----KWD 304 (512)
T ss_pred cccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHC------CeEEEEeCC-----HHH
Confidence 5678888776 54 888999999999999999999998764 479998765 567
Q ss_pred HHHHHHHhCCeEEecCCCCcccCCCCCCceeeeEEEEE----------------cCeEEEEccCCCHHHHHHHHHHHHHH
Q 015737 318 LDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT----------------KDSTLIVTDGSTRAAVEKRISEIRSL 381 (401)
Q Consensus 318 Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG~~~~v~v~----------------~~~~tIi~~g~~~~~l~e~~~~l~~~ 381 (401)
|+|||++|||++++ +++++++++||+|+.|++. ...|||++||+++..++|++|.++|+
T Consensus 305 le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DA 379 (512)
T 3iyg_Q 305 LRRLCKTVGATALP-----RLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDG 379 (512)
T ss_pred HHHHHHHhCCEEec-----ccccCCHHHCCcccEEEEEEeCCeEEEEEEcccCCCceEEEEECCCcHHHHHHHHHHHHHH
Confidence 99999999999999 4899999999999999864 35799999999999999999999999
Q ss_pred HHH
Q 015737 382 AEV 384 (401)
Q Consensus 382 l~~ 384 (401)
|..
T Consensus 380 l~~ 382 (512)
T 3iyg_Q 380 VNT 382 (512)
T ss_pred HHH
Confidence 973
No 21
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=9.7e-67 Score=545.05 Aligned_cols=324 Identities=22% Similarity=0.292 Sum_probs=294.5
Q ss_pred ceeeecCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeec-CCCCcEEecchHHHhccccccCcccchHHHHHHHHHh
Q 015737 31 VKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQN-KYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGA 109 (401)
Q Consensus 31 ~k~i~~g~~~~a~~~~~~~~~~la~~v~ttlGP~G~~kmI~~-~~g~~~iTnDG~TIlk~i~~~hP~~~~gakll~~~a~ 109 (401)
++++.|| +++|..|+.||+.++++|+|||||+||||||++ +.|+|+|||||+||||+|+++||+ |||++++|+
T Consensus 9 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~----Akll~e~a~ 82 (527)
T 3p9d_B 9 QVTEERA--ENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPA----AKVLVNISK 82 (527)
T ss_dssp CEEEEES--HHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHH----HHHHHHHHH
T ss_pred cchhhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHH----HHHHHHHHH
Confidence 6789999 899999999999999999999999999999999 899999999999999999999998 999999999
Q ss_pred ccccccCCCcchHHHHHHHHHHhhHHHHHc-CCChhhHHHHHHHHHHHHHHHHhccccccch-----h-hhHhhhhhccC
Q 015737 110 RTNDLAGDGCTTSIILAQGLIAEGVKVIAA-GMNPVQIARGIEKTSKALLSELKLTSREVED-----H-ELADVAAVSAG 182 (401)
Q Consensus 110 ~qd~~~GDGTTt~vvLa~~LL~~~~~li~~-G~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~-----~-~l~~va~ts~~ 182 (401)
+||+++||||||++|||++||+++.+++++ |+||+.|++||++|.+.++++|++++++++. . +|.++|+||++
T Consensus 83 ~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~ 162 (527)
T 3p9d_B 83 VQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLS 162 (527)
T ss_dssp HHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHT
T ss_pred HhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccc
Confidence 999999999999999999999999999999 9999999999999999999999999999874 4 89999999998
Q ss_pred C------chhHHHHHHHHHHhhccCC---cEEee--CCCCccceeEEEeceEEeecccCcccccccccceeEeeCceEEE
Q 015737 183 N------DYTVGKMISDALQQVGRNG---VVTIE--KGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLL 251 (401)
Q Consensus 183 ~------~~~la~li~~Av~~v~~~g---~I~i~--~G~~~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~Ill 251 (401)
+ ++.|+++++||+.++++++ .|+++ .|+++.|+ ++++||+|+++|.||| |.+++||+|++
T Consensus 163 sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds-~lv~G~~~dk~~~~~~--------p~~~~n~kIll 233 (527)
T 3p9d_B 163 SKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDS-FLDEGFILAKKFGNNQ--------PKRIENAKILI 233 (527)
T ss_dssp TSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCC-CEESSCCCSCCCSSSC--------CSCCSSCEEEE
T ss_pred cCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCcccc-EEEEeEEEecccCCCC--------CeeeecceEEE
Confidence 6 6899999999999999886 66654 69999998 9999999999999985 34568999999
Q ss_pred eccc--------------CCCHHHH-----------HHHHHHHHHcCCCEEEEecCcchHHHHHHHHhcccCcceEEEEe
Q 015737 252 VDKK--------------IKNPKDM-----------FKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIK 306 (401)
Q Consensus 252 ~d~~--------------I~~~~~i-----------~~~le~i~~~g~~lvIi~~~I~~~al~~L~~n~~~g~~~v~aVk 306 (401)
++++ +++++++ .+.+++|.+.|+||||++++|+++++++|..++ |++|+
T Consensus 234 l~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~------i~av~ 307 (527)
T 3p9d_B 234 ANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLG------INSIE 307 (527)
T ss_dssp ECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTC------BCCCC
T ss_pred eccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCC------CEEEe
Confidence 9885 4556665 467888999999999999999999999999986 57876
Q ss_pred cCCccccccccHHHHHHHhCCeEEecCCCCcccCCCCCCceeeeEEEEE---------------cCeEEEEccCCCHHHH
Q 015737 307 APAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT---------------KDSTLIVTDGSTRAAV 371 (401)
Q Consensus 307 ~p~~~~~~~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG~~~~v~v~---------------~~~~tIi~~g~~~~~l 371 (401)
. .++.+|+|||++|||+++++ ++++++++||+|+.|++. ...|||++||+++..+
T Consensus 308 ~-----~~~~dle~ia~~tGa~iv~~-----~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrg~te~~l 377 (527)
T 3p9d_B 308 H-----ADFEGVERLALVTGGEVVST-----FDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKAGEACTIVLRGATDQTL 377 (527)
T ss_dssp C-----CHHHHHHHHHHHTCCCCCST-----TSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCCSCCEECBCCTTCTTHH
T ss_pred c-----CCHHHHHHHHHHhCCEEecc-----hhhCCHHHCCCCcEEEEEEecceEEEEEECCCCCCEEEEEEcCCCHHHH
Confidence 4 45678999999999999995 899999999999999842 3689999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 015737 372 EKRISEIRSLAEVV 385 (401)
Q Consensus 372 ~e~~~~l~~~l~~~ 385 (401)
+|++|.++|+|..+
T Consensus 378 ~E~kr~i~DAl~~~ 391 (527)
T 3p9d_B 378 DEAERSLHDALSVL 391 (527)
T ss_dssp HHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999743
No 22
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=3.7e-65 Score=536.61 Aligned_cols=336 Identities=22% Similarity=0.318 Sum_probs=295.3
Q ss_pred CCCCCCCCCccccceeeecCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEEecchHHHhccccccCccc
Q 015737 18 LPKRAPNSVPRAMVKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLE 97 (401)
Q Consensus 18 ~~~~~~~~~~~~~~k~i~~g~~~~a~~~~~~~~~~la~~v~ttlGP~G~~kmI~~~~g~~~iTnDG~TIlk~i~~~hP~~ 97 (401)
+|+.....+.+-..+. ..|. +++|..|+.||+.|+++|+|||||+||||||+++.|+++|||||+||||+|+++||+
T Consensus 5 ~~~~~~~~~l~~~~~~-~~g~-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~- 81 (568)
T 3p9d_H 5 LPQNPNAGLFKQGYNS-YSNA-DGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPA- 81 (568)
T ss_dssp CCCCCCCSSCCSSCCB-CCCH-HHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCCHH-
T ss_pred CCCcchhhhhhcCccc-cccH-HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHH-
Confidence 3443233555543333 3342 679999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHhccccccCCCcchHHHHHHHHHHhhHHHHHcCCChhhHHHHHHHHHHHHHHHHhcccccc----chh-h
Q 015737 98 NIGVKLVRQAGARTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREV----EDH-E 172 (401)
Q Consensus 98 ~~gakll~~~a~~qd~~~GDGTTt~vvLa~~LL~~~~~li~~G~~p~~I~~g~~~a~~~~~~~L~~~s~~v----~~~-~ 172 (401)
|||++++|++||+++||||||++|||++||+++.+++++|+||+.|++||++|.+.++++|++++.++ ++. +
T Consensus 82 ---Akll~e~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~~~ 158 (568)
T 3p9d_H 82 ---VKVLVMATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDKNE 158 (568)
T ss_dssp ---HHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTHH
T ss_pred ---HHHHHHHHHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999876 344 8
Q ss_pred hHhhhhhccC-----CchhHHHHHHHHHHhhccC-----C-------cEEe--eCCCCccceeEEEeceEEeecccCccc
Q 015737 173 LADVAAVSAG-----NDYTVGKMISDALQQVGRN-----G-------VVTI--EKGKCTENSLEIVEGMRFDRGFLSPYF 233 (401)
Q Consensus 173 l~~va~ts~~-----~~~~la~li~~Av~~v~~~-----g-------~I~i--~~G~~~~ds~~~i~G~~~~~~~~~~~~ 233 (401)
|.++|+||++ ++++|+++++||+.+++++ | .|++ .+|++++|| ++++|++|+++|.
T Consensus 159 l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS-~lv~G~v~dk~~~---- 233 (568)
T 3p9d_H 159 LLKMIKPVISSKKYGSEDILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNS-TVIKGMVFNREPE---- 233 (568)
T ss_dssp HHHHHHHHHTTTSTTCHHHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGC-EEESSCCBSSCBS----
T ss_pred HHHHHHHHhhccCcchHHHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchh-eeeccEEEeeccc----
Confidence 9999999975 3589999999999999874 3 4554 469999999 9999999999873
Q ss_pred ccccccceeEee---CceEEEeccc-------------CCCHHHHHH-----------HHHHHHHcCCCEEEEecCcchH
Q 015737 234 VTDRQKRTVEFH---DGKLLLVDKK-------------IKNPKDMFK-----------ILDSAVKEKYPIVIVAEDIEQQ 286 (401)
Q Consensus 234 ~~~~~~~~~~i~---n~~Ill~d~~-------------I~~~~~i~~-----------~le~i~~~g~~lvIi~~~I~~~ 286 (401)
+|+++++ ||+|++++++ |++++++.+ ++++|.+.|+||||++++|+++
T Consensus 234 -----~m~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~ 308 (568)
T 3p9d_H 234 -----GHVKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGEL 308 (568)
T ss_dssp -----SGGGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHH
T ss_pred -----CCcEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChH
Confidence 3788888 9999999997 678888765 5778999999999999999999
Q ss_pred HHHHHHHhcccCcceEEEEecCCccccccccHHHHHHHhCCeEEecCCCCcccCCCCCCceeeeEEEEE-----------
Q 015737 287 ALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT----------- 355 (401)
Q Consensus 287 al~~L~~n~~~g~~~v~aVk~p~~~~~~~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG~~~~v~v~----------- 355 (401)
++++|..++ |+|||.| ++.+|+|||++|||+++++ ++++++++||+|+.|++.
T Consensus 309 al~~L~~~g------I~av~~v-----~~~~leria~~tGa~ivs~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~~~ 372 (568)
T 3p9d_H 309 ALHYLNRYG------ILVLKVP-----SKFELRRLCRVCGATPLPR-----LGAPTPEELGLVETVKTMEIGGDRVTVFK 372 (568)
T ss_dssp HHHHHHHHT------CEEECCC-----CHHHHHHHHHHHSCCCCSS-----SSCCCGGGCEECSCCCCCEETTEECBCCC
T ss_pred HHHHHHHCC------eEEEecC-----CHHHHHHHHHHhCCEEEec-----cccCCHHHCCcceEEEEEEecCceEEEEe
Confidence 999999886 5898655 5789999999999999995 899999999999988753
Q ss_pred ------cCeEEEEccCCCHHHHHHHHHHHHHHHHHH
Q 015737 356 ------KDSTLIVTDGSTRAAVEKRISEIRSLAEVV 385 (401)
Q Consensus 356 ------~~~~tIi~~g~~~~~l~e~~~~l~~~l~~~ 385 (401)
...|||++||+++..++|.+|.++|+|..+
T Consensus 373 g~~~l~~~~~TIllrG~t~~~l~E~er~i~DAL~vv 408 (568)
T 3p9d_H 373 QEQGEISRTSTIILRGATQNNLDDIERAIDDGVAAV 408 (568)
T ss_dssp CCSSSCCSSCEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCeEEEEECCCcHHHHHHHHHHHHHHHHHH
Confidence 357999999999999999999999999743
No 23
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=1.4e-65 Score=540.20 Aligned_cols=324 Identities=21% Similarity=0.325 Sum_probs=292.2
Q ss_pred ceeeecCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEEecchHHHhccccccCcccchHHHHHHHHHhc
Q 015737 31 VKEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGAR 110 (401)
Q Consensus 31 ~k~i~~g~~~~a~~~~~~~~~~la~~v~ttlGP~G~~kmI~~~~g~~~iTnDG~TIlk~i~~~hP~~~~gakll~~~a~~ 110 (401)
+.+..+| .++|..|+.||+.++++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |||++++|++
T Consensus 11 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~----Akll~e~a~~ 84 (590)
T 3p9d_C 11 SQERTTG--RQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPA----AKSMLELSRT 84 (590)
T ss_dssp TCCBCTT--HHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHH----HHTHHHHTTT
T ss_pred CcchhhH--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHH----HHHHHHHHHh
Confidence 3355677 899999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCCcchHHHHHHHHHHhhHHH-HHcCCChhhHHHHHHHHHHHHHHHHhccccccch--h-hhHhhhhhccCC---
Q 015737 111 TNDLAGDGCTTSIILAQGLIAEGVKV-IAAGMNPVQIARGIEKTSKALLSELKLTSREVED--H-ELADVAAVSAGN--- 183 (401)
Q Consensus 111 qd~~~GDGTTt~vvLa~~LL~~~~~l-i~~G~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~--~-~l~~va~ts~~~--- 183 (401)
||+++||||||++|||++||+++.++ +++|+||+.|++||++|.+.++++|+++++|++. . .|.++|+||+++
T Consensus 85 qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~L~~vA~tslsSK~~ 164 (590)
T 3p9d_C 85 QDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVENDAAMKKLIQASIGTKYV 164 (590)
T ss_dssp HHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCTHHHHHHHTTTSTTSTT
T ss_pred hhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999999 9999999999999999999999999999999874 3 799999998754
Q ss_pred ---chhHHHHHHHHHHhhccCCc------------------EEeeCCCCccceeEEEeceEEeecccCccccccccccee
Q 015737 184 ---DYTVGKMISDALQQVGRNGV------------------VTIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTV 242 (401)
Q Consensus 184 ---~~~la~li~~Av~~v~~~g~------------------I~i~~G~~~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~ 242 (401)
++.|+++++||+.++++++. |.+.+|++++|+ ++++||+|++++.|| +|++
T Consensus 165 ~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds-~lv~Gmvfdk~~~~~-------~m~~ 236 (590)
T 3p9d_C 165 IHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDS-RVLKGVLLNKDVVHP-------KMSR 236 (590)
T ss_dssp GGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGC-BCCSSEEECCCCSCT-------TSCS
T ss_pred cccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccc-eeeeEEEEecccCCC-------CCcc
Confidence 68999999999999987642 333579999999 999999999998876 4899
Q ss_pred EeeCceEEEeccc-------------CCCHHHHHHHH-----------HHHHHcCCCEEEEecCcchHHHHHHHHhcccC
Q 015737 243 EFHDGKLLLVDKK-------------IKNPKDMFKIL-----------DSAVKEKYPIVIVAEDIEQQALALLIRNKLRG 298 (401)
Q Consensus 243 ~i~n~~Ill~d~~-------------I~~~~~i~~~l-----------e~i~~~g~~lvIi~~~I~~~al~~L~~n~~~g 298 (401)
+++||+|+++|++ |++++++.+++ +++.+.|++|||++++|+++|+++|+.+++
T Consensus 237 ~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~I-- 314 (590)
T 3p9d_C 237 HIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGC-- 314 (590)
T ss_dssp CEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTTC--
T ss_pred eeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhccc--
Confidence 9999999999994 46677777655 688899999999999999999999998864
Q ss_pred cceEEEEecCCccccccccHHHHHHHhCCeEEecCCCCcccCCCCCCcee-eeEEEEE---------------cCe----
Q 015737 299 VLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGT-AIKVVIT---------------KDS---- 358 (401)
Q Consensus 299 ~~~v~aVk~p~~~~~~~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG~-~~~v~v~---------------~~~---- 358 (401)
++ ++++++.+|+|||++|||++++ +++++++++||+ |+.|++. +..
T Consensus 315 ----~a-----v~~~~k~~le~ia~~TGa~iis-----~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~ 380 (590)
T 3p9d_C 315 ----SV-----LRRVKKSDNNRIARVTGATIVN-----RVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGW 380 (590)
T ss_dssp ----CC-----CCCCCHHHHHHHHHHHTCCCCS-----CSTTCCTTSCBCCCSEEECCEETTEECEEECC----------
T ss_pred ----ee-----eccCCHHHHHHHHHHhCCceee-----cccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccccccc
Confidence 55 5889999999999999999999 489999999999 9998742 233
Q ss_pred ----------------------------------------------------EEEEccCCCHHHHHHHHHHHHHHHHH
Q 015737 359 ----------------------------------------------------TLIVTDGSTRAAVEKRISEIRSLAEV 384 (401)
Q Consensus 359 ----------------------------------------------------~tIi~~g~~~~~l~e~~~~l~~~l~~ 384 (401)
+||++||+++..++|++|.++|+|..
T Consensus 381 ~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a 458 (590)
T 3p9d_C 381 SHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHHHHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAV 458 (590)
T ss_dssp -----------------------------------------------CCCSCCCEEEECSSTTTHHHHHHHHHHHHHH
T ss_pred cccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999974
No 24
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.6e-64 Score=526.78 Aligned_cols=316 Identities=21% Similarity=0.357 Sum_probs=283.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEEecchHHHhccccccCcccchHHHHHHHHHhccccccCCCc
Q 015737 40 GSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGARTNDLAGDGC 119 (401)
Q Consensus 40 ~~a~~~~~~~~~~la~~v~ttlGP~G~~kmI~~~~g~~~iTnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGT 119 (401)
.+++..|+.+|++++++|+|||||+||||||+++.|+++|||||+||||+|+++||+ |||++++|++||+++||||
T Consensus 9 ~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~----akll~~~a~~qd~e~GDGT 84 (517)
T 3iyg_Z 9 QAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPT----ASLIAKVATAQDDITGDGT 84 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHHHHhCCCc
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred chHHHHHHHHHHhhHHHHHcCCChhhHHHHHHHHHHHHHHHHhccccccc-hh-hhHhhhhhccCC------chhHHHHH
Q 015737 120 TTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVE-DH-ELADVAAVSAGN------DYTVGKMI 191 (401)
Q Consensus 120 Tt~vvLa~~LL~~~~~li~~G~~p~~I~~g~~~a~~~~~~~L~~~s~~v~-~~-~l~~va~ts~~~------~~~la~li 191 (401)
||++|||++||+++.+++++|+||+.|++||++|.+.++++|++++++++ +. .|.++|+||+++ .+.|++++
T Consensus 85 TtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d~la~l~ 164 (517)
T 3iyg_Z 85 TSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRTKVHAELADVLTEAV 164 (517)
T ss_pred eeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCCHHHHHHHHHHHhccccchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999887 44 899999999875 48899999
Q ss_pred HHHHHhhccCC--------cEEeeCCCCccceeEEEeceEEeecccCcccccccccceeEeeCceEEEecccC-------
Q 015737 192 SDALQQVGRNG--------VVTIEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKI------- 256 (401)
Q Consensus 192 ~~Av~~v~~~g--------~I~i~~G~~~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~Ill~d~~I------- 256 (401)
+||+..+.+++ .|.+.+|++..|+ ++++||+|+++|.||| |+++++||+|+++|++|
T Consensus 165 vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~p~-------m~~~ien~kIll~~~~le~~k~e~ 236 (517)
T 3iyg_Z 165 VDSILAIKKQDEPIDLFMVEIMEMKHKSETDT-SLIRGLVLDHGARHPD-------MKKRVEDAYILTCNVSLEYEKTEV 236 (517)
T ss_pred HHHhheeccCCCcCChhHheeeeecCCCcccc-ceEeeEEEeccCCCCC-------ccccccCCeEEEeccccccccccc
Confidence 99999886532 2445689999999 9999999999999996 88999999999999875
Q ss_pred ------CCHHHHHH-----------HHHHHHHcCCC---------EEEEecCcchHHHHHHHHhcccCcceEEEEecCCc
Q 015737 257 ------KNPKDMFK-----------ILDSAVKEKYP---------IVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAF 310 (401)
Q Consensus 257 ------~~~~~i~~-----------~le~i~~~g~~---------lvIi~~~I~~~al~~L~~n~~~g~~~v~aVk~p~~ 310 (401)
++++++.+ .+++|...|++ |||++++|+++++++|..++ |++|+
T Consensus 237 ~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~g------I~~v~---- 306 (517)
T 3iyg_Z 237 NSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEG------IIALR---- 306 (517)
T ss_pred ceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHCC------CEEEE----
Confidence 45555544 35566555544 36667999999999999875 57764
Q ss_pred cccccccHHHHHHHhCCeEEecCCCCcccCCCCCC-ceeeeEEEEE---------------cCeEEEEccCCCHHHHHHH
Q 015737 311 GERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEV-LGTAIKVVIT---------------KDSTLIVTDGSTRAAVEKR 374 (401)
Q Consensus 311 ~~~~~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~~~-LG~~~~v~v~---------------~~~~tIi~~g~~~~~l~e~ 374 (401)
++++++|+|||++|||++++ +++++++++ ||+|+ |++. +..|||++||+++..++|.
T Consensus 307 -~v~~~~leria~~tGa~iv~-----~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~ 379 (517)
T 3iyg_Z 307 -RAKRRNMERLTLACGGIALN-----SLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQI 379 (517)
T ss_pred -ecCHHHHHHHHHHhCCEEec-----chhhCcccccCCcce-EEEEEEcCceEEEEeCCCCchhheeeecCCcHHHHHHH
Confidence 56789999999999999999 499999999 99999 8543 4679999999999999999
Q ss_pred HHHHHHHHHH
Q 015737 375 ISEIRSLAEV 384 (401)
Q Consensus 375 ~~~l~~~l~~ 384 (401)
+|.++|+|..
T Consensus 380 kr~l~DAl~~ 389 (517)
T 3iyg_Z 380 KDAIRDGLRA 389 (517)
T ss_pred HHHHHHHHHH
Confidence 9999999973
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=1.7e-64 Score=529.93 Aligned_cols=324 Identities=21% Similarity=0.321 Sum_probs=284.9
Q ss_pred eeeecCCcHHHHHHHHHHHHHHHHHhhhccCCCCCceEeecCCCCcEEecchHHHhccccccCcccchHHHHHHHHHhcc
Q 015737 32 KEVYFNHDGSATKKLQAGVDLVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGART 111 (401)
Q Consensus 32 k~i~~g~~~~a~~~~~~~~~~la~~v~ttlGP~G~~kmI~~~~g~~~iTnDG~TIlk~i~~~hP~~~~gakll~~~a~~q 111 (401)
.+...| .+++..|+.+|++++++|+|||||+||||||+++.|+|+|||||+||||+|+++||+ |||++++|++|
T Consensus 10 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~q 83 (546)
T 3p9d_F 10 AESLRR--DAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPT----AVLIARAAAAQ 83 (546)
T ss_dssp EEEEEH--HHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHH----HHHHHHHHHHH
T ss_pred cchhhH--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHH
Confidence 456667 799999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred ccccCCCcchHHHHHHHHHHhhHHHHHcCCChhhHHHHHHHHHHHHHHHHhccccccc----hh-hhHhhhhhccCC---
Q 015737 112 NDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIARGIEKTSKALLSELKLTSREVE----DH-ELADVAAVSAGN--- 183 (401)
Q Consensus 112 d~~~GDGTTt~vvLa~~LL~~~~~li~~G~~p~~I~~g~~~a~~~~~~~L~~~s~~v~----~~-~l~~va~ts~~~--- 183 (401)
|+++||||||++|||++||+++.+++++|+||+.|++||++|.+.++++|++++++++ +. +|.++|+||+++
T Consensus 84 d~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~ 163 (546)
T 3p9d_F 84 DEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVD 163 (546)
T ss_dssp HHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTH
T ss_pred HHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999885 33 899999999985
Q ss_pred ---chhHHHHHHHHHHhhccC-------CcEE--eeCCCCccceeEEEeceEEeecccCcccccccccceeEeeCceEEE
Q 015737 184 ---DYTVGKMISDALQQVGRN-------GVVT--IEKGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLL 251 (401)
Q Consensus 184 ---~~~la~li~~Av~~v~~~-------g~I~--i~~G~~~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~Ill 251 (401)
.+.|+++++||+..+.++ ..|+ +.+|++..|| ++++||+|+++|.||+ |+++++||+|++
T Consensus 164 ~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~~en~kIll 235 (546)
T 3p9d_F 164 ADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDT-TFIKGLVLDHGGRHPD-------MPTRVKNAYVLI 235 (546)
T ss_dssp HHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTC-CCCSSCEESCCCCSSS-------SCSSBCSCCCCE
T ss_pred hhHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCcccc-EEEeeEEEeccccccc-------CcceecCceEEE
Confidence 478999999999988631 2233 4589999999 9999999999999984 889999999999
Q ss_pred ecccC-------------CCHHHHH-----------HHHHHHHH---------cCCC-EEEEecCcchHHHHHHHHhccc
Q 015737 252 VDKKI-------------KNPKDMF-----------KILDSAVK---------EKYP-IVIVAEDIEQQALALLIRNKLR 297 (401)
Q Consensus 252 ~d~~I-------------~~~~~i~-----------~~le~i~~---------~g~~-lvIi~~~I~~~al~~L~~n~~~ 297 (401)
+|++| ++++++. ..+++|.. .|+| |||++++|+++|+++|+.|++
T Consensus 236 ~~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI- 314 (546)
T 3p9d_F 236 LNVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNI- 314 (546)
T ss_dssp ECCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTTC-
T ss_pred ecCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCCC-
Confidence 99864 3444433 23455554 3455 677788999999999999874
Q ss_pred CcceEEEEecCCccccccccHHHHHHHhCCeEEecCCCCcccCCCCCCceeeeEEEEE---------------cCeEEEE
Q 015737 298 GVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVIT---------------KDSTLIV 362 (401)
Q Consensus 298 g~~~v~aVk~p~~~~~~~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG~~~~v~v~---------------~~~~tIi 362 (401)
++| +++++.+|+|||++|||++++ +++++++++||+|+.|++. +..|||+
T Consensus 315 -----~~v-----r~v~~~~leria~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~ 379 (546)
T 3p9d_F 315 -----LAL-----RRAKRRNMERLQLVTGGEAQN-----SVEDLSPQILGFSGLVYQETIGEEKFTYVTENTDPKSCTIL 379 (546)
T ss_dssp -----EEE-----CCCCHHHHHHHHHTTTBCCCC-----CCSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCCSCEEEE
T ss_pred -----eeE-----ecCCHHHHHHHHHHhCCEEec-----chhhCCHhHCCcccEEEEEEecCceEEEEecCCCCceEEEE
Confidence 776 467789999999999999999 4899999999999999642 5789999
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHH
Q 015737 363 TDGSTRAAVEKRISEIRSLAEVV 385 (401)
Q Consensus 363 ~~g~~~~~l~e~~~~l~~~l~~~ 385 (401)
+||+++..++|++|.++|+|..+
T Consensus 380 lrG~te~~l~E~kr~l~DAl~~~ 402 (546)
T 3p9d_F 380 IKGSTHYALAQTKDAVRDGLRAV 402 (546)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999743
No 26
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=2.5e-58 Score=478.54 Aligned_cols=289 Identities=21% Similarity=0.352 Sum_probs=220.8
Q ss_pred EeecCCCCcEEecchHHHhccccccCcccchHHHHHHHHHhccccccCCCcchHHHHHHHHHHhhHHHHHcCCChhhHHH
Q 015737 69 VLQNKYGPPKIVNDGETVLKEIELEDPLENIGVKLVRQAGARTNDLAGDGCTTSIILAQGLIAEGVKVIAAGMNPVQIAR 148 (401)
Q Consensus 69 mI~~~~g~~~iTnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~~~GDGTTt~vvLa~~LL~~~~~li~~G~~p~~I~~ 148 (401)
||+++.|+++|||||+||||+|+++||+ |||++++|++||+++||||||++|||++||+++.+++++|+||+.|++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~ 76 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPA----AKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISE 76 (500)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHH----HHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 6889999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccch--h-hhHhhhhhccC------CchhHHHHHHHHHHhhccC--Cc--------EEee--
Q 015737 149 GIEKTSKALLSELKLTSREVED--H-ELADVAAVSAG------NDYTVGKMISDALQQVGRN--GV--------VTIE-- 207 (401)
Q Consensus 149 g~~~a~~~~~~~L~~~s~~v~~--~-~l~~va~ts~~------~~~~la~li~~Av~~v~~~--g~--------I~i~-- 207 (401)
||++|.+.++++|++++++++. . +|.++|+||++ +++.|+++++||+.+++++ |. |+++
T Consensus 77 G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~ 156 (500)
T 3aq1_B 77 GYRHAAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKR 156 (500)
T ss_dssp HHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEe
Confidence 9999999999999999999864 3 89999998854 5799999999999999865 43 4544
Q ss_pred CCCCccceeEEEeceEEeecccCcccccccccceeEeeCceEEEeccc-------------CCCHHHH-----------H
Q 015737 208 KGKCTENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKK-------------IKNPKDM-----------F 263 (401)
Q Consensus 208 ~G~~~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~Ill~d~~-------------I~~~~~i-----------~ 263 (401)
+|++++|+ ++++|++|+++|.||| |+++++||+|+++|++ |++++++ .
T Consensus 157 ~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~ 228 (500)
T 3aq1_B 157 AGGSIDDS-ELIDGLVIDKERSHPN-------MPEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMR 228 (500)
T ss_dssp ESSCGGGC-EEESEEEESCCCSSTT-------SCSEEEEEEEEEESSCBCC-------------------------CHHH
T ss_pred cCCCccce-EEEeeeEEeecCCCCC-------CcccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHH
Confidence 89999998 9999999999999997 6888999999999998 7777776 7
Q ss_pred HHHHHHHHcCCCEEEEecCcchHHHHHHHHhcccCcceEEEEecCCccccccccHHHHHHHhCCeEEecCCCCcccCCCC
Q 015737 264 KILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGK 343 (401)
Q Consensus 264 ~~le~i~~~g~~lvIi~~~I~~~al~~L~~n~~~g~~~v~aVk~p~~~~~~~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~ 343 (401)
++++++.+.|+||||++++|+++|+++|+.++ |+|| +++++++|+|||++|||++++ +++++++
T Consensus 229 ~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av-----~~~~k~~le~ia~~tGa~iis-----~l~~~~~ 292 (500)
T 3aq1_B 229 EMAEKVIASGANVVFCQKGIDDMAQYYIEKAG------IYAV-----RRVKKSDLKRLSKVTGATIIQ-----DLDQITT 292 (500)
T ss_dssp HHHHHHHTTCCSEEEESSCBCHHHHHHHHHTT------CEEE-----CSCCHHHHHHHHHHHCCCCBS-----CTTCCCS
T ss_pred HHHHHHHHhCcCEEEECCCcCHHHHHHHHHCC------EEEE-----EeCCHHHHHHHHHHhCCeEec-----ccccCCH
Confidence 88999999999999999999999999999986 5786 688999999999999999999 4899999
Q ss_pred CCceeeeEEEEE---------------cCeEEEEccCCCHHHHHHHHHHHHHHHHHH
Q 015737 344 EVLGTAIKVVIT---------------KDSTLIVTDGSTRAAVEKRISEIRSLAEVV 385 (401)
Q Consensus 344 ~~LG~~~~v~v~---------------~~~~tIi~~g~~~~~l~e~~~~l~~~l~~~ 385 (401)
++||+|+.|++. +..|||++||+++..++|++|.++|+|..+
T Consensus 293 ~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~~~ 349 (500)
T 3aq1_B 293 EDVGTAGLVEEKEVRGGKMTYVTGCQNSKAVTVLLHGGTEHVVDSLDHALNDALHVV 349 (500)
T ss_dssp TTCEEEEEEEEEECSSSEEEEEEEETTCCCEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred hHCCCceEEEEEEecCeEEEEEECCCCCceEEEEecCCcHHHHHHHHHHHHHHHHHH
Confidence 999999999975 468999999999999999999999999743
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.1e-40 Score=295.00 Aligned_cols=171 Identities=42% Similarity=0.708 Sum_probs=167.0
Q ss_pred eEEEeceEEeecccCcccccccccceeEeeCceEEEecccCCCHHHHHHHHHHHHHcCCCEEEEecCcchHHHHHHHHhc
Q 015737 216 LEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKIKNPKDMFKILDSAVKEKYPIVIVAEDIEQQALALLIRNK 295 (401)
Q Consensus 216 ~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~Ill~d~~I~~~~~i~~~le~i~~~g~~lvIi~~~I~~~al~~L~~n~ 295 (401)
+++++||.||+||+||||++++++|..+++||.||++|.+|+++++++|++|++.+.|+||+|++++|+++||++|+.|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcceEEEEecCCccccccccHHHHHHHhCCeEEecCCCCcccCCCCCCceeeeEEEEEcCeEEEEccCCCHHHHHHHH
Q 015737 296 LRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVITKDSTLIVTDGSTRAAVEKRI 375 (401)
Q Consensus 296 ~~g~~~v~aVk~p~~~~~~~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG~~~~v~v~~~~~tIi~~g~~~~~l~e~~ 375 (401)
++|.++|+|||+|+||+.++..|+|||.+|||+++++++|+++++++.++||+|++|+++++.|||+.+++++..+++|+
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh
Q 015737 376 SEIRSLAEVVL 386 (401)
Q Consensus 376 ~~l~~~l~~~~ 386 (401)
+.|+.+++.+.
T Consensus 162 ~qIr~~ie~t~ 172 (194)
T 3m6c_A 162 KHLRAEIDKSD 172 (194)
T ss_dssp HHHHHHHHTCC
T ss_pred HHHHHHHHhcC
Confidence 99999997543
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=4.2e-39 Score=289.09 Aligned_cols=168 Identities=46% Similarity=0.764 Sum_probs=164.1
Q ss_pred EeceEEeecccCcccccccccceeEeeCceEEEecccCCCHHHHHHHHHHHHHcCCCEEEEecCcchHHHHHHHHhcccC
Q 015737 219 VEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKIKNPKDMFKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRG 298 (401)
Q Consensus 219 i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~Ill~d~~I~~~~~i~~~le~i~~~g~~lvIi~~~I~~~al~~L~~n~~~g 298 (401)
.+||.||+||+||||++++++|..+++||.||++|.+|+++++++|+||++.+.|+||||++++|+++||++|+.|+++|
T Consensus 12 ~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg 91 (201)
T 3osx_A 12 SEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRG 91 (201)
T ss_dssp CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHT
T ss_pred ccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEecCCccccccccHHHHHHHhCCeEEecCCCCcccCCCCCCceeeeEEEEEcCeEEEEccCCCHHHHHHHHHHH
Q 015737 299 VLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVITKDSTLIVTDGSTRAAVEKRISEI 378 (401)
Q Consensus 299 ~~~v~aVk~p~~~~~~~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG~~~~v~v~~~~~tIi~~g~~~~~l~e~~~~l 378 (401)
.++|+|||+|+||+.++..|+|||.+|||+++++++|+++++++.++||+|++|+++++.|||+.+++++..+++|++.|
T Consensus 92 ~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~qI 171 (201)
T 3osx_A 92 IVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQI 171 (201)
T ss_dssp SCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh
Q 015737 379 RSLAEVVL 386 (401)
Q Consensus 379 ~~~l~~~~ 386 (401)
+.+++.+.
T Consensus 172 r~qie~t~ 179 (201)
T 3osx_A 172 RQQIEEST 179 (201)
T ss_dssp HHHHHTCC
T ss_pred HHHHHhcC
Confidence 99997543
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=1e-36 Score=261.26 Aligned_cols=144 Identities=46% Similarity=0.788 Sum_probs=141.9
Q ss_pred ceEEeecccCcccccccccceeEeeCceEEEecccCCCHHHHHHHHHHHHHcCCCEEEEecCcchHHHHHHHHhcccCcc
Q 015737 221 GMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKIKNPKDMFKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVL 300 (401)
Q Consensus 221 G~~~~~~~~~~~~~~~~~~~~~~i~n~~Ill~d~~I~~~~~i~~~le~i~~~g~~lvIi~~~I~~~al~~L~~n~~~g~~ 300 (401)
||.||+||+||||++++++|..+++||.||++|.+|++.++++|++|++.+.|+||+|++++|+++||++|+.|+++|.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEecCCccccccccHHHHHHHhCCeEEecCCCCcccCCCCCCceeeeEEEEEcCeEEEEcc
Q 015737 301 KAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVITKDSTLIVTD 364 (401)
Q Consensus 301 ~v~aVk~p~~~~~~~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG~~~~v~v~~~~~tIi~~ 364 (401)
+|+|||+|+||+.|+..|+|||.+|||+++++++|+++++.+.++||+|++|+++++.|||+.+
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999874
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.89 E-value=5.4e-23 Score=185.79 Aligned_cols=134 Identities=19% Similarity=0.319 Sum_probs=111.0
Q ss_pred ccceeEEEeceEEeecccCcccccccccceeEeeCceEEEecccC-------------CCHHHH-----------HHHHH
Q 015737 212 TENSLEIVEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKI-------------KNPKDM-----------FKILD 267 (401)
Q Consensus 212 ~~ds~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~Ill~d~~I-------------~~~~~i-----------~~~le 267 (401)
++|| ++++|++|++++.+| +||++++||+|+++|++| ++++++ ...++
T Consensus 1 ~~dS-~lv~Gvvl~k~~~~~-------~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~ 72 (178)
T 1gml_A 1 MEDS-CVLRGVMINKDVTHP-------RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCE 72 (178)
T ss_dssp --CC-SEEEEEEESCCCSST-------TSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHH
T ss_pred CCCc-EEEEEEEEeccccCC-------CCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHH
Confidence 4688 899999999999886 489999999999999964 344443 34577
Q ss_pred HHHHcCCCEEEEecCcchHHHHHHHHhcccCcceEEEEecCCccccccccHHHHHHHhCCeEEecCCCCcccCCCCCCce
Q 015737 268 SAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLG 347 (401)
Q Consensus 268 ~i~~~g~~lvIi~~~I~~~al~~L~~n~~~g~~~v~aVk~p~~~~~~~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG 347 (401)
+|++.|++|||++++|+|.|+++|..++ |+|| +++++++|+|||++|||+++++ ++++++++||
T Consensus 73 kI~~~g~nVVl~~k~I~d~a~~~l~k~g------I~~v-----r~v~~~dleria~atGa~iv~~-----~~~l~~~~LG 136 (178)
T 1gml_A 73 DIIQLKPDVVITEKGISDLAQHYLMRAN------VTAI-----RRVRKTDNNRIARACGARIVSR-----PEELREDDVG 136 (178)
T ss_dssp HHHTTCCSEEEESSCBCHHHHHHHHHTT------CEEE-----CCCCHHHHHHHHHHHCCCEESC-----GGGCCGGGSB
T ss_pred HHhhcCCcEEEECCcccHHHHHHHHHCC------CEEE-----ecCCHHHHHHHHHHhCCeEeCC-----hhhCChhhhC
Confidence 8999999999999999999999999987 4776 6789999999999999999994 8999999999
Q ss_pred e-eeEEEEE---------------cCeEEEEccCCCHH
Q 015737 348 T-AIKVVIT---------------KDSTLIVTDGSTRA 369 (401)
Q Consensus 348 ~-~~~v~v~---------------~~~~tIi~~g~~~~ 369 (401)
+ |+.|++. +..|||++||++.+
T Consensus 137 ~~~~~v~~~~ig~~~~~~~~gc~~~~~~TIllRG~~~~ 174 (178)
T 1gml_A 137 TGAGLLEIKKIGDEYFTFITDCKDPKACTILLRGASHH 174 (178)
T ss_dssp CCEEEEEEEEETTEEEEEEEEESSTTSCEEEEEC----
T ss_pred CcccEEEEEEECCeEEEEEECCCCCCEEEEEEECCCcc
Confidence 9 9999864 58999999999864
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.82 E-value=8.2e-20 Score=161.94 Aligned_cols=126 Identities=21% Similarity=0.315 Sum_probs=107.2
Q ss_pred EeceEEeecccCcccccccccceeEeeCceEEEecccC-------------CCHHHHH-----------HHHHHHHHcCC
Q 015737 219 VEGMRFDRGFLSPYFVTDRQKRTVEFHDGKLLLVDKKI-------------KNPKDMF-----------KILDSAVKEKY 274 (401)
Q Consensus 219 i~G~~~~~~~~~~~~~~~~~~~~~~i~n~~Ill~d~~I-------------~~~~~i~-----------~~le~i~~~g~ 274 (401)
++|++|++++.+| +||++++||+|+++|++| ++++++. ..+++|++.|+
T Consensus 1 i~Gvv~~k~~~~~-------~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHS-------KMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCT-------TSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCC-------CCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 4799999999887 589999999999999964 4565554 45778999999
Q ss_pred CEEEEecCcchHHHHHHHHhcccCcceEEEEecCCccccccccHHHHHHHhCCeEEecCCCCcccCCCCCCceeeeEEEE
Q 015737 275 PIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRDEMGLTLDKAGKEVLGTAIKVVI 354 (401)
Q Consensus 275 ~lvIi~~~I~~~al~~L~~n~~~g~~~v~aVk~p~~~~~~~~~Le~Ia~~tGa~~i~~~~g~~~~~~~~~~LG~~~~v~v 354 (401)
+|||++++|+|.|+++|..++ |+|| +++++++|+|||++|||++++ ++++++++.||+|+.|++
T Consensus 74 nVVl~~k~I~d~a~~~l~k~g------I~~v-----~~v~~~dleria~atGa~iv~-----~~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKEG------IYAV-----RRVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHTT------CEEE-----CSCCHHHHHHHHHHHTCCCBS-----STTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHCC------CEEE-----ccCCHHHHHHHHHHhCCeeeC-----ccccCCcccCccceEEEE
Confidence 999999999999999999986 4776 678999999999999999999 489999999999999998
Q ss_pred E---cCeEEEEccCCC
Q 015737 355 T---KDSTLIVTDGST 367 (401)
Q Consensus 355 ~---~~~~tIi~~g~~ 367 (401)
. .+..+++.+-.+
T Consensus 138 ~~ig~~~~~~~~g~~~ 153 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKN 153 (159)
T ss_dssp EEETTEEEEEEESCC-
T ss_pred EEECCeEEEEEECCCC
Confidence 6 456666665433
No 32
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=31.74 E-value=1.2e+02 Score=25.95 Aligned_cols=69 Identities=14% Similarity=0.141 Sum_probs=39.0
Q ss_pred cceeEeeC-ceEEEecccCCCHHHHHHHHHHHHHcCCCEEEEecCc-chHHHHHHHHhcccCcceEEEEecCCcccccc
Q 015737 239 KRTVEFHD-GKLLLVDKKIKNPKDMFKILDSAVKEKYPIVIVAEDI-EQQALALLIRNKLRGVLKAAAIKAPAFGERKS 315 (401)
Q Consensus 239 ~~~~~i~n-~~Ill~d~~I~~~~~i~~~le~i~~~g~~lvIi~~~I-~~~al~~L~~n~~~g~~~v~aVk~p~~~~~~~ 315 (401)
+.+..++. .+|+++...=.+.+.+..+++.+.+.++++|++.+|+ +++.++.|.. + ..++.+|+ |+...
T Consensus 17 ~~~~~~~g~m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~~~~~~l~~--l--~~~~~~V~----GNhD~ 87 (190)
T 1s3l_A 17 TENLYFQGHMKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSLFVIKEFEN--L--NANIIATY----GNNDG 87 (190)
T ss_dssp ---------CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCSTHHHHHGGG--C--SSEEEEEC----CTTCC
T ss_pred ccChhhcCCeEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCHHHHHHHHh--c--CCCEEEEe----CCCcc
Confidence 45666666 6777654322455667777888777889999999996 4555555532 1 13566763 55543
No 33
>3aon_B V-type sodium ATPase subunit G; V-ATPase, coiled-coil, alpha/beta fold, hydrol Na(+)-ATPase, NTPA3-NTPB3, NTPC, central AXIS; HET: MSE; 2.00A {Enterococcus hirae}
Probab=31.31 E-value=67 Score=25.83 Aligned_cols=75 Identities=15% Similarity=0.218 Sum_probs=46.6
Q ss_pred cCCCHHHHHHHHHHHHHcCCCEEEEecCcchHHHHHHHHhcccCcceEEEEecCCcccccc----ccHHHHHHHhCCeEE
Q 015737 255 KIKNPKDMFKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKS----HYLDDIAILTGGLVI 330 (401)
Q Consensus 255 ~I~~~~~i~~~le~i~~~g~~lvIi~~~I~~~al~~L~~n~~~g~~~v~aVk~p~~~~~~~----~~Le~Ia~~tGa~~i 330 (401)
.+++.+++.+.++++.+.+..++++.+.+.+..-..+-..+ +...+ +.|.+|+...... .-.+++.++.|..++
T Consensus 26 ~v~~~ee~~~~~~~l~~~digIIlIte~ia~~i~~~i~~~~-~~~~P-~IveIPs~~g~~~~~~~~i~~~V~~aiG~di~ 103 (115)
T 3aon_B 26 HGTTKTEIRKTIDEMAKNEYGVIYITEQCANLVPETIERYK-GQLTP-AIILIPSHQGTLGIGLEEIQNSVEKAVGQNIL 103 (115)
T ss_dssp CCCSHHHHHHHHHHHHHTTEEEEEEEHHHHTTCHHHHHHHH-TSSSC-EEEEECBTTBCCSHHHHHHHHHHHHHTTCC--
T ss_pred EeCCHHHHHHHHHHHHhcCceEEEEeHHHHHHhHHHHHHHh-CCCCC-EEEEECCCCCCCCccHHHHHHHHHHHhCcceE
Confidence 45788999988888876677889888877655444433322 22234 4567787543321 456778889998877
Q ss_pred e
Q 015737 331 R 331 (401)
Q Consensus 331 ~ 331 (401)
-
T Consensus 104 ~ 104 (115)
T 3aon_B 104 S 104 (115)
T ss_dssp -
T ss_pred e
Confidence 5
No 34
>2ln3_A De novo designed protein OR135; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=31.26 E-value=1.5e+02 Score=21.36 Aligned_cols=52 Identities=12% Similarity=0.261 Sum_probs=38.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCcchHHHHHHHHhcccCcceEEEEecCCccccccccHHHHHHHhCCeEEec
Q 015737 258 NPKDMFKILDSAVKEKYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFGERKSHYLDDIAILTGGLVIRD 332 (401)
Q Consensus 258 ~~~~i~~~le~i~~~g~~lvIi~~~I~~~al~~L~~n~~~g~~~v~aVk~p~~~~~~~~~Le~Ia~~tGa~~i~~ 332 (401)
+-++++++--+....|.++=+--.+-++.-+..| ..+|+|+|+-||.++...
T Consensus 11 nkeelleialkfisqgldlevefdstddkeieef-----------------------erdmedlakktgvqiqkq 62 (83)
T 2ln3_A 11 NKEELLEIALKFISQGLDLEVEFDSTDDKEIEEF-----------------------ERDMEDLAKKTGVQIQKQ 62 (83)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEECCCCHHHHHHH-----------------------HHHHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHHHHhcCCceEEEecCCChHHHHHH-----------------------HhHHHHHHHhhchhHHHH
Confidence 4567777766778889988776666666555443 246899999999998774
No 35
>2d00_A V-type ATP synthase subunit F; V-ATPase, CHEY, FRET, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.149.1.1 PDB: 3a5c_H* 3a5d_H 3j0j_H*
Probab=29.43 E-value=1.8e+02 Score=22.90 Aligned_cols=73 Identities=12% Similarity=0.113 Sum_probs=47.8
Q ss_pred CCCHHHHHHHHHHHHHc-CCCEEEEecCcchHHHHHHHHhcccCcceEEEEecCCcc---ccc--cc-cHHHHHHHhCCe
Q 015737 256 IKNPKDMFKILDSAVKE-KYPIVIVAEDIEQQALALLIRNKLRGVLKAAAIKAPAFG---ERK--SH-YLDDIAILTGGL 328 (401)
Q Consensus 256 I~~~~~i~~~le~i~~~-g~~lvIi~~~I~~~al~~L~~n~~~g~~~v~aVk~p~~~---~~~--~~-~Le~Ia~~tGa~ 328 (401)
+++++++.+.++++.+. +..++++.+.+.+..-..+...+.+...+ +.+.+|+.. ... ++ -.+++.++.|..
T Consensus 28 v~~~ee~~~~~~~l~~~~digIIlIte~~a~~i~~~i~~~~~~~~~P-~Il~IPs~~~~~g~~~~~~~i~~~V~~aiG~d 106 (109)
T 2d00_A 28 ASSAEEAQSLLETLVERGGYALVAVDEALLPDPERAVERLMRGRDLP-VLLPIAGLKEAFQGHDVEGYMRELVRKTIGFD 106 (109)
T ss_dssp CSSHHHHHHHHHHHHHHCCCSEEEEETTTCSCHHHHHHHHTTCCCCC-EEEEESCGGGGGSSSCHHHHHHHHHHHHHSCC
T ss_pred eCCHHHHHHHHHHHhhCCCeEEEEEeHHHHHhhHHHHHHHHhCCCCe-EEEEECCCcccCCCcchHHHHHHHHHHHhCCc
Confidence 47888998888887665 78999999999877666554443233344 466788755 221 22 346666777765
Q ss_pred E
Q 015737 329 V 329 (401)
Q Consensus 329 ~ 329 (401)
+
T Consensus 107 i 107 (109)
T 2d00_A 107 I 107 (109)
T ss_dssp C
T ss_pred c
Confidence 3
No 36
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=26.44 E-value=60 Score=28.89 Aligned_cols=17 Identities=18% Similarity=0.157 Sum_probs=8.7
Q ss_pred HHHHHHcCCCEEEEecC
Q 015737 266 LDSAVKEKYPIVIVAED 282 (401)
Q Consensus 266 le~i~~~g~~lvIi~~~ 282 (401)
+|++.+.+++|||....
T Consensus 53 ~E~i~~l~PDLIi~~~~ 69 (260)
T 2q8p_A 53 VEAVKKLKPTHVLSVST 69 (260)
T ss_dssp HHHHHHTCCSEEEEEGG
T ss_pred HHHHHhcCCCEEEecCc
Confidence 34555555555555443
No 37
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=25.65 E-value=1e+02 Score=27.31 Aligned_cols=58 Identities=9% Similarity=0.103 Sum_probs=37.3
Q ss_pred HHHHHHcCCCEEEEecCcc-hHHHHHHHHhcccCcceEEEEecC-CccccccccHHHHHHHhCCe
Q 015737 266 LDSAVKEKYPIVIVAEDIE-QQALALLIRNKLRGVLKAAAIKAP-AFGERKSHYLDDIAILTGGL 328 (401)
Q Consensus 266 le~i~~~g~~lvIi~~~I~-~~al~~L~~n~~~g~~~v~aVk~p-~~~~~~~~~Le~Ia~~tGa~ 328 (401)
+|+|.+.+++|||...... +.....|...++ .++.+..+ .+. --.+.++.++.++|-.
T Consensus 52 ~E~i~~l~PDlIi~~~~~~~~~~~~~L~~~gi----pvv~~~~~~~~~-~~~~~i~~lg~~~g~~ 111 (255)
T 3md9_A 52 AEGILAMKPTMLLVSELAQPSLVLTQIASSGV----NVVTVPGQTTPE-SVAMKINAVATALHQT 111 (255)
T ss_dssp HHHHHTTCCSEEEEETTCSCHHHHHHHHHTTC----EEEEECCCCSHH-HHHHHHHHHHHHHTCH
T ss_pred HHHHHccCCCEEEEcCCcCchhHHHHHHHcCC----cEEEeCCCCCHH-HHHHHHHHHHHHhCCH
Confidence 6888899999998877653 455566654433 56665432 221 1246688889999864
No 38
>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A
Probab=25.60 E-value=79 Score=21.90 Aligned_cols=36 Identities=19% Similarity=0.181 Sum_probs=26.8
Q ss_pred HhhHHHHHcCCChhhHHHHHHHHH---HHHHHHHhcccc
Q 015737 131 AEGVKVIAAGMNPVQIARGIEKTS---KALLSELKLTSR 166 (401)
Q Consensus 131 ~~~~~li~~G~~p~~I~~g~~~a~---~~~~~~L~~~s~ 166 (401)
.+..+|+..|++..+.+++++.+. +.|...|.+...
T Consensus 13 ~~Ia~Lm~mGFsr~~ai~AL~~a~nnve~AaniLlef~~ 51 (52)
T 2ooa_A 13 AKIAKLMGEGYAFEEVKRALEIAQNNVEVARSILREFAF 51 (52)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHTTTCHHHHHHHHHHHCC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHhCCCHHHHHHHHHHhcC
Confidence 355778999999999999998874 556666665543
No 39
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=24.07 E-value=1.1e+02 Score=27.08 Aligned_cols=58 Identities=14% Similarity=0.047 Sum_probs=34.9
Q ss_pred HHHHHHcCCCEEEEecC-cchHHHHHHHHhcccCcceEEEEecCC--ccccccccHHHHHHHhCCe
Q 015737 266 LDSAVKEKYPIVIVAED-IEQQALALLIRNKLRGVLKAAAIKAPA--FGERKSHYLDDIAILTGGL 328 (401)
Q Consensus 266 le~i~~~g~~lvIi~~~-I~~~al~~L~~n~~~g~~~v~aVk~p~--~~~~~~~~Le~Ia~~tGa~ 328 (401)
+|+|.+.+++|||.... ..+...+.|...++ .++.+..+. +.+ -.+.++.+++++|-.
T Consensus 52 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gi----pvv~~~~~~~~~~~-~~~~i~~lg~~~g~~ 112 (256)
T 2r7a_A 52 SEGILSLRPDSVITWQDAGPQIVLDQLRAQKV----NVVTLPRVPATLEQ-MYANIRQLAKTLQVP 112 (256)
T ss_dssp HHHHHTTCCSEEEEETTCSCHHHHHHHHHTTC----EEEEECCCSCCHHH-HHHHHHHHHHHTTCH
T ss_pred HHHHHccCCCEEEEcCCCCCHHHHHHHHHcCC----cEEEecCCCCCHHH-HHHHHHHHHHHhCCH
Confidence 67888888888887654 34555666654433 455553221 111 235677888888854
No 40
>2cos_A Serine/threonine protein kinase LATS2; UBA domain, structure genomics, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=22.69 E-value=1.2e+02 Score=21.14 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=26.8
Q ss_pred HHHHHcCCChhhHHHHHHHH----HHHHHHHHhccccc
Q 015737 134 VKVIAAGMNPVQIARGIEKT----SKALLSELKLTSRE 167 (401)
Q Consensus 134 ~~li~~G~~p~~I~~g~~~a----~~~~~~~L~~~s~~ 167 (401)
..|++.|+++.....+++.. ++.+++.|.+++.|
T Consensus 14 q~L~eMGFd~erae~Alk~Tg~~Gle~AmewL~k~~~~ 51 (54)
T 2cos_A 14 QELVNAGCDQEMAGRALKQTGSRSIEAALEYISKMSGP 51 (54)
T ss_dssp HHHHHHHCCHHHHHHHHHHHTSCCHHHHHHHHHHHSCS
T ss_pred HHHHHcCCCHHHHHHHHHHhCcccHHHHHHHHHHhcCC
Confidence 56788999998887777765 56788888888766
No 41
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=21.22 E-value=1.4e+02 Score=22.66 Aligned_cols=35 Identities=17% Similarity=0.325 Sum_probs=25.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCcchHHHHHH
Q 015737 257 KNPKDMFKILDSAVKEKYPIVIVAEDIEQQALALL 291 (401)
Q Consensus 257 ~~~~~i~~~le~i~~~g~~lvIi~~~I~~~al~~L 291 (401)
.+.+++..+++..++.|.|+|+.-.+-+..-...|
T Consensus 35 tssqdirdiiksmkdngkplvvfvngasqndvnef 69 (112)
T 2lnd_A 35 TSSQDIRDIIKSMKDNGKPLVVFVNGASQNDVNEF 69 (112)
T ss_dssp CSHHHHHHHHHHHTTCCSCEEEEECSCCHHHHHHH
T ss_pred cchhhHHHHHHHHHhcCCeEEEEecCcccccHHHH
Confidence 46788899999999999998876655554334333
Done!