Query 015738
Match_columns 401
No_of_seqs 288 out of 3060
Neff 11.8
Searched_HMMs 29240
Date Mon Mar 25 17:49:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015738.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015738hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 1.2E-60 4.2E-65 429.2 24.0 353 2-391 15-385 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 1.7E-60 5.8E-65 428.3 23.4 333 23-392 3-353 (437)
3 4g8k_A 2-5A-dependent ribonucl 100.0 5E-48 1.7E-52 335.1 25.9 293 32-379 23-330 (337)
4 3utm_A Tankyrase-1; tankyrase, 100.0 6.9E-48 2.3E-52 336.8 23.9 312 18-392 8-322 (351)
5 3utm_A Tankyrase-1; tankyrase, 100.0 4.9E-47 1.7E-51 331.4 19.4 320 2-392 25-348 (351)
6 1wdy_A 2-5A-dependent ribonucl 100.0 2.4E-45 8.3E-50 311.2 28.2 265 72-381 4-284 (285)
7 4g8k_A 2-5A-dependent ribonucl 100.0 2.3E-46 7.8E-51 324.6 22.0 292 2-345 26-330 (337)
8 1wdy_A 2-5A-dependent ribonucl 100.0 6.1E-45 2.1E-49 308.7 24.3 265 33-347 4-284 (285)
9 2fo1_E LIN-12 protein; beta-ba 100.0 1.2E-45 4.2E-50 323.5 17.2 313 3-375 39-371 (373)
10 3d9h_A CDNA FLJ77766, highly s 100.0 2.9E-43 1E-47 296.9 21.9 273 69-379 11-283 (285)
11 1oy3_D Transcription factor in 100.0 3.1E-42 1E-46 291.6 22.4 264 66-392 2-267 (282)
12 2fo1_E LIN-12 protein; beta-ba 100.0 6.4E-43 2.2E-47 306.2 16.1 275 5-334 70-368 (373)
13 1yyh_A HN1;, notch 1, ankyrin 100.0 7.5E-42 2.6E-46 283.7 21.5 230 117-371 3-245 (253)
14 3d9h_A CDNA FLJ77766, highly s 100.0 3.1E-42 1.1E-46 290.6 19.1 244 121-393 12-265 (285)
15 2xai_A ASB-9, ankyrin repeat a 100.0 4.5E-42 1.5E-46 286.2 19.8 238 72-391 2-246 (261)
16 3ljn_A Hypothetical protein; a 100.0 3.9E-43 1.3E-47 307.6 13.6 265 65-377 12-316 (364)
17 2xai_A ASB-9, ankyrin repeat a 100.0 2.3E-41 7.8E-46 282.0 21.1 208 123-393 2-209 (261)
18 1yyh_A HN1;, notch 1, ankyrin 100.0 6.8E-41 2.3E-45 277.9 22.4 230 65-334 2-245 (253)
19 3ljn_A Hypothetical protein; a 100.0 3E-42 1E-46 302.0 11.1 275 24-346 10-319 (364)
20 1oy3_D Transcription factor in 100.0 8.8E-41 3E-45 282.6 18.3 230 117-392 2-234 (282)
21 1k1a_A B-cell lymphoma 3-encod 100.0 3.5E-40 1.2E-44 272.2 20.2 230 117-371 2-238 (241)
22 3b7b_A Euchromatic histone-lys 100.0 1.2E-39 4E-44 268.3 23.2 228 117-370 4-231 (237)
23 3b7b_A Euchromatic histone-lys 100.0 5.1E-39 1.8E-43 264.4 23.6 228 65-333 3-231 (237)
24 3aji_A 26S proteasome non-ATPa 100.0 5E-39 1.7E-43 263.4 21.1 227 122-375 4-230 (231)
25 1k1a_A B-cell lymphoma 3-encod 100.0 6.9E-40 2.4E-44 270.4 15.5 192 119-333 41-237 (241)
26 3aji_A 26S proteasome non-ATPa 100.0 2.1E-38 7.2E-43 259.7 23.2 224 70-333 3-226 (231)
27 4b93_B Ankyrin repeat domain-c 100.0 1.5E-39 5.3E-44 270.7 15.4 218 119-361 6-230 (269)
28 1s70_B 130 kDa myosin-binding 100.0 2.1E-39 7.2E-44 276.4 16.5 250 70-371 37-286 (299)
29 2dzn_A Probable 26S proteasome 100.0 3.8E-38 1.3E-42 257.7 20.9 215 124-392 2-217 (228)
30 3eu9_A Huntingtin-interacting 100.0 7E-38 2.4E-42 258.3 22.6 232 67-376 3-236 (240)
31 1sw6_A Regulatory protein SWI6 100.0 2.1E-39 7.1E-44 278.6 13.4 296 34-392 23-325 (327)
32 1s70_B 130 kDa myosin-binding 100.0 6.8E-39 2.3E-43 273.2 16.3 272 79-393 4-275 (299)
33 2dzn_A Probable 26S proteasome 100.0 1.5E-37 5E-42 254.2 21.5 179 207-392 2-183 (228)
34 3kea_A K1L; tropism, ANK repea 100.0 3.8E-38 1.3E-42 265.4 18.0 227 117-381 24-252 (285)
35 4b93_B Ankyrin repeat domain-c 100.0 1.5E-38 5.2E-43 264.7 15.0 214 153-393 6-228 (269)
36 2f8y_A Notch homolog 1, transl 100.0 1.5E-37 5.3E-42 253.1 20.3 217 135-377 2-218 (223)
37 3kea_A K1L; tropism, ANK repea 100.0 1E-37 3.5E-42 262.8 18.7 244 46-350 10-255 (285)
38 3eu9_A Huntingtin-interacting 100.0 1.6E-36 5.4E-41 250.2 22.5 213 120-392 5-219 (240)
39 2f8y_A Notch homolog 1, transl 100.0 2E-36 6.9E-41 246.5 19.2 213 47-302 2-215 (223)
40 1sw6_A Regulatory protein SWI6 100.0 1.2E-38 4E-43 273.9 3.5 248 71-392 21-292 (327)
41 2rfa_A Transient receptor pote 100.0 9.1E-35 3.1E-39 238.2 21.4 203 72-333 2-218 (232)
42 1ikn_D Protein (I-kappa-B-alph 100.0 7.5E-36 2.6E-40 245.1 9.7 215 119-391 3-227 (236)
43 2pnn_A Transient receptor pote 100.0 1.2E-34 4.2E-39 243.3 16.8 237 63-388 3-272 (273)
44 1ikn_D Protein (I-kappa-B-alph 100.0 1.5E-35 5.2E-40 243.3 10.6 182 202-392 3-193 (236)
45 2rfa_A Transient receptor pote 100.0 1.4E-33 4.9E-38 231.0 21.0 200 157-380 2-227 (232)
46 2etb_A Transient receptor pote 100.0 1.3E-33 4.3E-38 234.8 17.0 213 123-380 1-251 (256)
47 2etb_A Transient receptor pote 100.0 3.5E-34 1.2E-38 238.2 13.5 210 33-269 1-247 (256)
48 3hra_A Ankyrin repeat family p 100.0 1.5E-32 5E-37 219.9 21.8 193 122-371 3-200 (201)
49 4gpm_A Engineered protein OR26 100.0 9.5E-35 3.3E-39 223.3 7.3 160 2-202 5-164 (169)
50 2pnn_A Transient receptor pote 100.0 2E-33 6.9E-38 235.9 15.4 161 27-217 6-194 (273)
51 3hra_A Ankyrin repeat family p 100.0 2.9E-32 1E-36 218.1 21.3 179 205-392 3-187 (201)
52 4gpm_A Engineered protein OR26 100.0 1.5E-32 5E-37 211.1 17.4 160 209-379 6-165 (169)
53 3jxi_A Vanilloid receptor-rela 100.0 1.1E-31 3.9E-36 223.6 16.9 201 155-377 2-252 (260)
54 3jxi_A Vanilloid receptor-rela 100.0 1.4E-32 4.9E-37 229.1 10.9 210 33-269 4-251 (260)
55 3v30_A DNA-binding protein rfx 100.0 4.7E-31 1.6E-35 205.4 15.5 170 207-386 2-171 (172)
56 2aja_A Ankyrin repeat family p 100.0 4.1E-34 1.4E-38 247.3 -6.5 260 46-391 76-357 (376)
57 4hbd_A KN motif and ankyrin re 100.0 1.1E-30 3.9E-35 218.7 13.9 181 186-374 88-275 (276)
58 4hbd_A KN motif and ankyrin re 100.0 1.6E-30 5.5E-35 217.7 14.8 199 72-302 75-274 (276)
59 2rfm_A Putative ankyrin repeat 100.0 1.7E-29 5.8E-34 200.3 17.7 162 200-371 28-189 (192)
60 2aja_A Ankyrin repeat family p 100.0 3.3E-33 1.1E-37 241.6 -4.2 281 4-370 68-370 (376)
61 1ihb_A P18-INK4C(INK6), cyclin 100.0 3.7E-31 1.2E-35 204.0 7.6 158 1-199 5-162 (162)
62 2rfm_A Putative ankyrin repeat 100.0 1.4E-29 4.7E-34 200.8 15.9 164 65-266 27-190 (192)
63 3f6q_A Integrin-linked protein 100.0 2.2E-29 7.5E-34 197.1 13.5 169 205-383 3-171 (179)
64 3v31_A Ankyrin repeat family A 100.0 1.7E-28 5.9E-33 189.8 17.1 159 206-375 2-160 (167)
65 1ihb_A P18-INK4C(INK6), cyclin 100.0 5.2E-29 1.8E-33 191.8 13.4 158 72-267 4-161 (162)
66 3v31_A Ankyrin repeat family A 100.0 9.6E-29 3.3E-33 191.3 13.8 159 72-268 2-160 (167)
67 2y1l_E Darpin-8.4; hydrolase-i 100.0 3.8E-28 1.3E-32 188.1 16.8 158 204-371 11-168 (169)
68 3twr_A Tankyrase-2; ankyrin re 100.0 5.2E-29 1.8E-33 192.4 11.3 154 206-369 7-160 (165)
69 3twr_A Tankyrase-2; ankyrin re 100.0 7.6E-29 2.6E-33 191.5 12.1 150 240-396 5-154 (165)
70 2y1l_E Darpin-8.4; hydrolase-i 100.0 5.3E-28 1.8E-32 187.3 16.4 160 69-266 10-169 (169)
71 1bd8_A P19INK4D CDK4/6 inhibit 100.0 3.9E-28 1.3E-32 185.7 15.4 154 207-371 2-155 (156)
72 2vge_A RELA-associated inhibit 100.0 2.2E-32 7.6E-37 222.0 -8.7 198 18-261 2-206 (229)
73 2vge_A RELA-associated inhibit 100.0 6.6E-30 2.3E-34 207.4 5.3 193 190-396 1-202 (229)
74 3v30_A DNA-binding protein rfx 100.0 9E-28 3.1E-32 186.8 17.1 169 158-352 2-171 (172)
75 1awc_B Protein (GA binding pro 100.0 7.9E-28 2.7E-32 183.1 16.4 150 208-368 3-152 (153)
76 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.6E-28 5.5E-33 201.3 11.1 183 205-399 3-197 (239)
77 1awc_B Protein (GA binding pro 100.0 4.2E-28 1.4E-32 184.6 12.6 140 244-392 3-142 (153)
78 3f6q_A Integrin-linked protein 100.0 1.2E-27 4.1E-32 187.2 13.6 145 241-392 3-147 (179)
79 1bi7_B P16INK4A, MTS1, multipl 99.9 8.8E-28 3E-32 183.3 11.0 145 237-390 6-151 (156)
80 1bd8_A P19INK4D CDK4/6 inhibit 99.9 5.6E-27 1.9E-31 179.2 14.7 153 73-265 2-155 (156)
81 1ycs_B 53BP2, P53BP2; ankyrin 99.9 5.6E-29 1.9E-33 204.1 3.6 176 2-217 6-191 (239)
82 1d9s_A Cyclin-dependent kinase 99.9 4.9E-27 1.7E-31 174.7 11.8 133 234-375 3-136 (136)
83 1n0r_A 4ANK, 4 ankyrin repeats 99.9 8.7E-25 3E-29 160.6 15.0 126 242-375 1-126 (126)
84 3t8k_A Uncharacterized protein 99.9 2.8E-27 9.6E-32 184.8 1.6 159 3-203 8-183 (186)
85 3t8k_A Uncharacterized protein 99.9 4.9E-26 1.7E-30 177.8 7.3 162 207-380 6-184 (186)
86 3deo_A Signal recognition part 99.9 8.6E-26 2.9E-30 177.1 8.1 179 4-265 3-181 (183)
87 2jab_A H10-2-G3; HER2, darpin, 99.9 7.7E-25 2.6E-29 162.8 12.7 125 240-371 11-135 (136)
88 1d9s_A Cyclin-dependent kinase 99.9 4.9E-25 1.7E-29 163.9 10.5 132 63-232 2-134 (136)
89 2jab_A H10-2-G3; HER2, darpin, 99.9 4.8E-26 1.6E-30 169.4 3.5 122 2-147 15-136 (136)
90 3ui2_A Signal recognition part 99.9 4E-25 1.4E-29 181.4 7.4 171 34-268 15-185 (244)
91 1bi7_B P16INK4A, MTS1, multipl 99.9 1.2E-24 4.3E-29 165.8 9.4 146 201-357 6-152 (156)
92 1n0r_A 4ANK, 4 ankyrin repeats 99.9 4.4E-24 1.5E-28 156.8 10.3 126 33-199 1-126 (126)
93 3c5r_A BARD-1, BRCA1-associate 99.9 1.6E-24 5.3E-29 161.5 7.7 125 238-369 5-129 (137)
94 3c5r_A BARD-1, BRCA1-associate 99.9 5.8E-24 2E-28 158.4 10.3 112 275-392 7-118 (137)
95 3aaa_C Myotrophin, protein V-1 99.9 7E-24 2.4E-28 154.7 9.7 108 277-390 6-113 (123)
96 2b0o_E UPLC1; arfgap, structur 99.9 2.6E-23 8.8E-28 175.5 12.7 138 243-392 151-295 (301)
97 3ehr_A Osteoclast-stimulating 99.9 5.9E-24 2E-28 172.4 8.4 139 238-384 68-207 (222)
98 3ui2_A Signal recognition part 99.9 3.5E-24 1.2E-28 175.8 6.7 166 3-232 17-183 (244)
99 3aaa_C Myotrophin, protein V-1 99.9 1.7E-23 5.8E-28 152.7 9.1 114 240-360 4-117 (123)
100 1dcq_A PYK2-associated protein 99.9 2.5E-22 8.6E-27 167.5 15.0 134 243-390 130-270 (278)
101 3deo_A Signal recognition part 99.9 2.8E-22 9.7E-27 157.0 11.1 138 206-370 43-180 (183)
102 3ehr_A Osteoclast-stimulating 99.9 1.9E-23 6.5E-28 169.4 3.7 138 28-206 67-205 (222)
103 3jue_A Arfgap with coiled-coil 99.9 8.2E-22 2.8E-26 169.8 13.8 146 240-390 196-344 (368)
104 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.1E-21 3.7E-26 135.2 11.0 93 277-375 1-93 (93)
105 2b0o_E UPLC1; arfgap, structur 99.9 5.3E-21 1.8E-25 161.3 17.4 141 206-362 150-299 (301)
106 3lvq_E ARF-GAP with SH3 domain 99.9 1.7E-21 5.8E-26 176.6 13.6 141 244-390 133-280 (497)
107 2l6b_A NR1C; ankyrin, consensu 99.9 9.4E-22 3.2E-26 141.6 9.1 106 276-387 7-112 (115)
108 1n0q_A 3ANK, 3 ankyrin repeats 99.9 5.6E-22 1.9E-26 136.6 7.0 93 33-149 1-93 (93)
109 3jue_A Arfgap with coiled-coil 99.8 1.3E-22 4.4E-27 174.8 2.5 141 3-167 201-346 (368)
110 1dcq_A PYK2-associated protein 99.8 9.5E-21 3.2E-25 158.0 12.5 189 120-333 62-259 (278)
111 3lvq_E ARF-GAP with SH3 domain 99.8 2.2E-22 7.5E-27 182.4 1.7 134 3-167 134-276 (497)
112 2l6b_A NR1C; ankyrin, consensu 99.8 2.5E-20 8.4E-25 134.1 8.5 109 238-353 4-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 4.4E-18 1.5E-22 120.9 9.9 88 276-368 22-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 1.8E-18 6.2E-23 122.9 4.3 90 30-143 20-109 (110)
115 1gp8_A Protein (scaffolding pr 69.2 0.65 2.2E-05 23.9 -0.7 21 2-22 14-34 (40)
116 3mkq_B Coatomer subunit alpha; 38.9 1.2E+02 0.0041 22.6 6.8 102 248-377 42-146 (177)
117 3gvo_A Pumilio 2, pumilio homo 33.0 1.3E+02 0.0045 25.2 7.2 98 274-371 213-318 (351)
118 3zrh_A Ubiquitin thioesterase 28.0 1.5E+02 0.0051 25.5 6.3 23 277-299 68-90 (454)
119 3gvo_A Pumilio 2, pumilio homo 23.8 1.3E+02 0.0045 25.2 5.6 96 238-333 212-317 (351)
120 3zrh_A Ubiquitin thioesterase 23.4 57 0.002 27.9 3.1 61 80-146 29-91 (454)
121 3k49_A MRNA-binding protein PU 20.5 3.8E+02 0.013 22.5 8.5 129 240-370 183-334 (369)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-60 Score=429.20 Aligned_cols=353 Identities=24% Similarity=0.289 Sum_probs=294.4
Q ss_pred chhhhhhhhcCCCCchhhhhhHHHHHHHHhhcCCCeeEEeecchhhhhchHHHHHHHHhhCChhhhcccCCCCcHHHHHH
Q 015738 2 DLNFFKAASAGNSEPFKDMERDVIERLLTAKAKNTILHINIISSERENVSTKFVEEILEKCPALLLQVNAKGDTPLHLAA 81 (401)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~ 81 (401)
.||||.||..|+.++|++|++.|.+....+..|.||||+| +..|+.+++++|++ .+++++.++..|.||||+|+
T Consensus 15 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A--~~~g~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~ 88 (437)
T 1n11_A 15 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMA--ARAGHTEVAKYLLQ----NKAKVNAKAKDDQTPLHCAA 88 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHH--HHHTCHHHHHHHHH----HTCCSSCCCTTSCCHHHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH--HHcCCHHHHHHHHh----CCCCCCCCCCCCCCHHHHHH
Confidence 4899999999999999999999888777788899999999 99999999999998 68899999999999999999
Q ss_pred HcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCH
Q 015738 82 KFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYPYSANNYGKTP 161 (401)
Q Consensus 82 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~ 161 (401)
..|+.++|++|+++|++++. .+..|.||||+|+..|+.+++++|++++... ...+..|.||
T Consensus 89 ~~g~~~~v~~Ll~~ga~~~~------------------~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~ 149 (437)
T 1n11_A 89 RIGHTNMVKLLLENNANPNL------------------ATTAGHTPLHIAAREGHVETVLALLEKEASQ-ACMTKKGFTP 149 (437)
T ss_dssp HHTCHHHHHHHHHHTCCTTC------------------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCH
T ss_pred HCCCHHHHHHHHhCCCCCCC------------------CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-cCCCCCCCCH
Confidence 99999999999999998643 3344444444444444444444444444432 2333444444
Q ss_pred HHHHHhcCCchhHHHhhhhhc------------------cCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccc
Q 015738 162 LYMAAEYENRSDMLRGLLENR------------------TSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDT 223 (401)
Q Consensus 162 l~~a~~~~~~~~~~~~l~~~~------------------~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~ 223 (401)
||+|+..++ .++++.|++.. ..++.+++++|++.|++++..+..|.||||+|+.. ++.+
T Consensus 150 L~~A~~~g~-~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~--~~~~ 226 (437)
T 1n11_A 150 LHVAAKYGK-VRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQ--NQVE 226 (437)
T ss_dssp HHHHHHTTC-HHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHT--TCHH
T ss_pred HHHHHHcCC-HHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHc--CCHH
Confidence 444444322 22222222211 13588999999999999999999999999999998 8889
Q ss_pred hHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCC
Q 015738 224 ALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPK 303 (401)
Q Consensus 224 ~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~ 303 (401)
.++.|++.+.. ++..+..|.||||+|+..|+.+++++|++.+++. +..+. .|.||||.|+..|+.+++++|++++.+
T Consensus 227 ~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 303 (437)
T 1n11_A 227 VARSLLQYGGS-ANAESVQGVTPLHLAAQEGHAEMVALLLSKQANG-NLGNK-SGLTPLHLVAQEGHVPVADVLIKHGVM 303 (437)
T ss_dssp HHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCT-TCCCHHHHHHHHTCHHHHHHHHHHTCC
T ss_pred HHHHHHHcCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCC-CCCCC-CCCCHHHHHHHcCCHHHHHHHHhCCcc
Confidence 99999887654 7888889999999999999999999999999887 44443 789999999999999999999999988
Q ss_pred CccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHHhhcCCChhhhhccC
Q 015738 304 CYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRSTQANYDAVNKQN 383 (401)
Q Consensus 304 ~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g 383 (401)
++.++..|+||||+|+..++.+++++|++ .|+++|.+|..|.||||+|+..|+.+++++|++. |++++.+|..|
T Consensus 304 -~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~----~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~-ga~~~~~~~~g 377 (437)
T 1n11_A 304 -VDATTRMGYTPLHVASHYGNIKLVKFLLQ----HQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKN-GASPNEVSSDG 377 (437)
T ss_dssp -TTCCCSSCCCHHHHHHHSSCSHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCSCCCCSSS
T ss_pred -CCCCCCCCCCHHHHHHHcCcHHHHHHHHh----cCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHC-cCCCCCCCCCC
Confidence 68899999999999999999999999999 8999999999999999999999999999999976 99999999999
Q ss_pred cceeeeee
Q 015738 384 VSVRHVFN 391 (401)
Q Consensus 384 ~t~l~~a~ 391 (401)
+||+++|.
T Consensus 378 ~t~l~~A~ 385 (437)
T 1n11_A 378 TTPLAIAK 385 (437)
T ss_dssp CCHHHHHH
T ss_pred CCHHHHHH
Confidence 99999994
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.7e-60 Score=428.30 Aligned_cols=333 Identities=27% Similarity=0.280 Sum_probs=290.1
Q ss_pred HHHHHHHHhhcCCCeeEEeecchhhhhchHHHHHHHHhhCChhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhhhhhccC
Q 015738 23 DVIERLLTAKAKNTILHINIISSERENVSTKFVEEILEKCPALLLQVNAKGDTPLHLAAKFGHFEIVRVLIERAKLAQRG 102 (401)
Q Consensus 23 ~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~ 102 (401)
.|++....+..|.||||+| +..|+.+++++|++ .|++++..+..|.||||+||..|+.++|++|+++|++.
T Consensus 3 ~g~~~~~~~~~g~t~L~~A--a~~g~~~~v~~Ll~----~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~--- 73 (437)
T 1n11_A 3 PGISGGGGGESGLTPLHVA--SFMGHLPIVKNLLQ----RGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV--- 73 (437)
T ss_dssp ------------CCHHHHH--HHHTCHHHHHHHHH----TTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCS---
T ss_pred CCCCccccCCCCCCHHHHH--HHCCCHHHHHHHHH----cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC---
Confidence 3556666777899999999 99999999999998 78999999999999999999999999999999999884
Q ss_pred CCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhc
Q 015738 103 DEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENR 182 (401)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~ 182 (401)
+..+..|.||||+|+..|+.+++++|+++|+++ ...+..|.||||+|+..++.. +++.+++..
T Consensus 74 ---------------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~~~ 136 (437)
T 1n11_A 74 ---------------NAKAKDDQTPLHCAARIGHTNMVKLLLENNANP-NLATTAGHTPLHIAAREGHVE-TVLALLEKE 136 (437)
T ss_dssp ---------------SCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHHTCHH-HHHHHHHTT
T ss_pred ---------------CCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCC-CCCCCCCCcHHHHHHHcCCHH-HHHHHHhCC
Confidence 567889999999999999999999999999985 477889999999999876544 444444322
Q ss_pred ------------------cCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCC
Q 015738 183 ------------------TSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGW 244 (401)
Q Consensus 183 ------------------~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 244 (401)
..++.+++++|++.|++++..+..|.||||+|+.. ++.+.+++|+..+.. ++..+..|.
T Consensus 137 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~g~~-~~~~~~~g~ 213 (437)
T 1n11_A 137 ASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHH--NNLDIVKLLLPRGGS-PHSPAWNGY 213 (437)
T ss_dssp CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHT--TCHHHHHHHGGGTCC-SCCCCTTCC
T ss_pred CCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHc--CCHHHHHHHHhCCCC-CCCcCCCCC
Confidence 24578999999999999999999999999999998 888999988887655 677788899
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCC
Q 015738 245 TPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFH 324 (401)
Q Consensus 245 t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~ 324 (401)
||||+|+..|+.+++++|++.|++. +..+ ..|.||||.|+..|+.+++++|++.+++ ++.++..|.||||+|+..++
T Consensus 214 t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~ 290 (437)
T 1n11_A 214 TPLHIAAKQNQVEVARSLLQYGGSA-NAES-VQGVTPLHLAAQEGHAEMVALLLSKQAN-GNLGNKSGLTPLHLVAQEGH 290 (437)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHHTC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC-CCCC-CCCCCHHHHHHHCCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCC
Confidence 9999999999999999999999886 3333 3789999999999999999999999988 68899999999999999999
Q ss_pred hhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHHhhcCCChhhhhccCcceeeeeec
Q 015738 325 VGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRSTQANYDAVNKQNVSVRHVFNY 392 (401)
Q Consensus 325 ~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 392 (401)
.+++++|++ .|++++.++..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|..
T Consensus 291 ~~~~~~Ll~----~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-gad~n~~~~~g~t~L~~A~~ 353 (437)
T 1n11_A 291 VPVADVLIK----HGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQH-QADVNAKTKLGYSPLHQAAQ 353 (437)
T ss_dssp HHHHHHHHH----HTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHT-TCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHHh----CCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHH
Confidence 999999999 8999999999999999999999999999999976 99999999999999999943
No 3
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=5e-48 Score=335.07 Aligned_cols=293 Identities=20% Similarity=0.159 Sum_probs=259.2
Q ss_pred hcCCCeeEEeecchhhhhchHHHHHHHHhhCChhhhcccC-CCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCc
Q 015738 32 KAKNTILHINIISSERENVSTKFVEEILEKCPALLLQVNA-KGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGV 110 (401)
Q Consensus 32 ~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 110 (401)
..|.|+||.| ++.|+.++|++|++ .|++++.++. .|+||||+||..|+.++|++|+++|+++
T Consensus 23 ~~~~t~L~~A--v~~g~~~~V~~LL~----~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~----------- 85 (337)
T 4g8k_A 23 VEDNHLLIKA--VQNEDVDLVQQLLE----GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP----------- 85 (337)
T ss_dssp HHHHHHHHHH--HHTTCHHHHHHHHH----HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-----------
T ss_pred CCCChHHHHH--HHcCCHHHHHHHHH----CCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCch-----------
Confidence 3478999999 99999999999998 6899998775 4999999999999999999999999985
Q ss_pred hhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHH
Q 015738 111 EPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMV 190 (401)
Q Consensus 111 ~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~ 190 (401)
+..+..+.++++.++..+...++..+++.+.++ ...+..|.||+++|+. .+..+++
T Consensus 86 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~g~t~l~~A~~----------------~~~~~~~ 141 (337)
T 4g8k_A 86 -------VLRKKNGATPFILAAIAGSVKLLKLFLSKGADV-NECDFYGFTAFMEAAV----------------YGKVKAL 141 (337)
T ss_dssp -------TCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCBCTTCCBHHHHHHH----------------TTCHHHH
T ss_pred -------hhhccCCCchhHHHHhcccchhhHHhhhccchh-hhhccCCCCHHHHHHH----------------cCcHHHH
Confidence 567788999999999999999999999999885 4788899999999998 3489999
Q ss_pred HHHHhcCCCCccC----------CCCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCC----H
Q 015738 191 LALLENSTSVSHE----------GPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGN----Y 256 (401)
Q Consensus 191 ~~Ll~~~~~~~~~----------~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~----~ 256 (401)
+++++.|++++.. +..|.||||+|+.. ++.+.++.|+.+.+.+++..+..|.|+++.++..+. .
T Consensus 142 ~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~--g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~ 219 (337)
T 4g8k_A 142 KFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK--GHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVE 219 (337)
T ss_dssp HHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHH--TCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHH
T ss_pred HHHHHcCCCcchhhccccccccccCCCCcHHHHHHHC--CCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHH
Confidence 9999999988753 44689999999999 899999999988888899999999999998877554 4
Q ss_pred HHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCC
Q 015738 257 RTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNP 336 (401)
Q Consensus 257 ~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~ 336 (401)
.++++|++.|+++ +..+. .|.||||.|+..|+.++++.|++.....++.+|..|+||||+|++.|+.+++++|++
T Consensus 220 ~i~~lLl~~gad~-n~~d~-~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~--- 294 (337)
T 4g8k_A 220 AITHLLLDHGADV-NVRGE-RGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCK--- 294 (337)
T ss_dssp HHHHHHHHTTCCT-TCCCG-GGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHT---
T ss_pred HHHHHHHHCCCCC-CCcCC-CCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHH---
Confidence 6889999999987 44444 789999999999999999999997655589999999999999999999999999999
Q ss_pred ccccccccCCCCCCcHHHHHHHhCChhHHHHHHhhcCCChhhh
Q 015738 337 LARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRSTQANYDAV 379 (401)
Q Consensus 337 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~ 379 (401)
.|+++|. .||||+|+..++.+++++||++ ||++|..
T Consensus 295 -~GAd~n~-----~~~L~~A~~~~~~~iv~~Ll~~-GA~~d~~ 330 (337)
T 4g8k_A 295 -RGASTDC-----GDLVMTARRNYDHSLVKVLLSH-GAKEDFH 330 (337)
T ss_dssp -TSCSSTT-----CCHHHHHHHTTCHHHHHHHHHT-TCCC---
T ss_pred -CCCCCCC-----CCHHHHHHHcCCHHHHHHHHHC-cCCCCCC
Confidence 7888865 4699999999999999999976 9999864
No 4
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=6.9e-48 Score=336.82 Aligned_cols=312 Identities=18% Similarity=0.173 Sum_probs=265.3
Q ss_pred hhhhhHHHHHHHHhhcCCCeeEEeecchhhhhchHHHHHHHHhhCChhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhhh
Q 015738 18 KDMERDVIERLLTAKAKNTILHINIISSERENVSTKFVEEILEKCPALLLQVNAKGDTPLHLAAKFGHFEIVRVLIERAK 97 (401)
Q Consensus 18 ~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~ 97 (401)
..|.+.+.+....+..|.++||.| +..|+.+.++.++. ..+.+++..|..|.||||+||..|+.++|++|+++|+
T Consensus 8 l~l~~~~~~~~~~~~~~~~~L~~A--~~~g~~~~v~~ll~---~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 82 (351)
T 3utm_A 8 LDLADPSAKAVLTGEYKKDELLEA--ARSGNEEKLMALLT---PLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGA 82 (351)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHH--HHHTCHHHHHHHCC---TTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred hhccCCceeeeeeccccchhHHHH--HHcCCHHHHHHHHH---hcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 355566777788888899999999 99999999988865 4688899999999999999999999999999999998
Q ss_pred hhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHhcCCchhHHHh
Q 015738 98 LAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYPYSANNYGKTPLYMAAEYENRSDMLRG 177 (401)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~ 177 (401)
++ +..+..|.||||+|+..|+.+++++|+++|+++. ..+..|.||||+|+.
T Consensus 83 ~~------------------~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~-~~~~~g~t~L~~A~~---------- 133 (351)
T 3utm_A 83 DV------------------HAKDKGGLVPLHNACSYGHYEVTELLLKHGACVN-AMDLWQFTPLHEAAS---------- 133 (351)
T ss_dssp CT------------------TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHH----------
T ss_pred CC------------------CccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHH----------
Confidence 84 6678899999999999999999999999998854 678899999999998
Q ss_pred hhhhccCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHH
Q 015738 178 LLENRTSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYR 257 (401)
Q Consensus 178 l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~ 257 (401)
.++.+++++|++.|++++..+..|.+|++.++.. +..+.+.+... .+++..++..+..+
T Consensus 134 ------~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~--~~~~~~~~~~~-------------~~~~~~~~~~~~~~ 192 (351)
T 3utm_A 134 ------KNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTP--ELRERLTYEFK-------------GHSLLQAAREADLA 192 (351)
T ss_dssp ------TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSH--HHHHHHHHHHH-------------HHHHHHHHHTTCHH
T ss_pred ------cCCHHHHHHHHHcCCCCccccCCCCcchHHHhhh--hhHHHHHhhhc-------------ccHHHHHHHhccHH
Confidence 3489999999999999999999999999998766 44444443332 24577788888888
Q ss_pred HHHHHHhcCccccccccCCCCchHHHHHHhc---CCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhc
Q 015738 258 TVNLLLETDQSASNIADKDRKMTALHLAAGK---GDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLEN 334 (401)
Q Consensus 258 ~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 334 (401)
.++.++...... ......|.||||.|+.. +..+++++|++.+.+ ++.++..|+||||+|+..++.+++++|++
T Consensus 193 ~~~~~l~~~~~~--~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~- 268 (351)
T 3utm_A 193 KVKKTLALEIIN--FKQPQSHETALHCAVASLHPKRKQVAELLLRKGAN-VNEKNKDFMTPLHVAAERAHNDVMEVLHK- 268 (351)
T ss_dssp HHHHHTTTCCTT--CCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHH-
T ss_pred HHHHHHHhhccc--ccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCC-cCCcCCCCCCHHHHHHHcCCHHHHHHHHH-
Confidence 888888776443 23334788999999988 558899999998887 67888999999999999999999999998
Q ss_pred CCccccccccCCCCCCcHHHHHHHhCChhHHHHHHhhcCCChhhhhccCcceeeeeec
Q 015738 335 NPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRSTQANYDAVNKQNVSVRHVFNY 392 (401)
Q Consensus 335 ~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 392 (401)
.|++++.+|..|+||||+|+..|+.+++++|++. |+|++.+|..|.||+++|.+
T Consensus 269 ---~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-gad~~~~~~~g~tal~~a~~ 322 (351)
T 3utm_A 269 ---HGAKMNALDSLGQTALHRAALAGHLQTCRLLLSY-GSDPSIISLQGFTAAQMGNE 322 (351)
T ss_dssp ---TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHSCH
T ss_pred ---CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCCcCCCCCChhhhhhH
Confidence 7899999999999999999999999999999866 99999999999999998843
No 5
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=4.9e-47 Score=331.43 Aligned_cols=320 Identities=22% Similarity=0.197 Sum_probs=261.9
Q ss_pred chhhhhhhhcCCCCchhhhhhH-HHHHHHHhhcCCCeeEEeecchhhhhchHHHHHHHHhhCChhhhcccCCCCcHHHHH
Q 015738 2 DLNFFKAASAGNSEPFKDMERD-VIERLLTAKAKNTILHINIISSERENVSTKFVEEILEKCPALLLQVNAKGDTPLHLA 80 (401)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~ll~~-~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A 80 (401)
.++|+.||+.|+.+.|++|+.. +++....+..|.||||+| +..|+.+++++|++ .|++++..|..|.||||+|
T Consensus 25 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A--~~~g~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A 98 (351)
T 3utm_A 25 KDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLA--AGYNRVRIVQLLLQ----HGADVHAKDKGGLVPLHNA 98 (351)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHH--HHTTCHHHHHHHHH----TTCCTTCCCTTCCCHHHHH
T ss_pred chhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHH--HHcCCHHHHHHHHH----cCCCCCccCCCCCcHHHHH
Confidence 4789999999999999999986 666666777899999999 99999999999999 7999999999999999999
Q ss_pred HHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCC
Q 015738 81 AKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYPYSANNYGKT 160 (401)
Q Consensus 81 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t 160 (401)
|..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|+++|++. ...+..|.+
T Consensus 99 ~~~g~~~iv~~Ll~~g~~~------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~~ 159 (351)
T 3utm_A 99 CSYGHYEVTELLLKHGACV------------------NAMDLWQFTPLHEAASKNRVEVCSLLLSHGADP-TLVNCHGKS 159 (351)
T ss_dssp HHTTCHHHHHHHHHTTCCT------------------TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCC
T ss_pred HHCCCHHHHHHHHHCCCCC------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-ccccCCCCc
Confidence 9999999999999999884 567788999999999999999999999999984 477889999
Q ss_pred HHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccchHHHHHHhhcccccccc
Q 015738 161 PLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETD 240 (401)
Q Consensus 161 ~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~ 240 (401)
|+++++... ..+.+.+... ..++..++.. +....+..++..... ....+
T Consensus 160 ~l~~a~~~~----------------~~~~~~~~~~------------~~~~~~~~~~--~~~~~~~~~l~~~~~-~~~~~ 208 (351)
T 3utm_A 160 AVDMAPTPE----------------LRERLTYEFK------------GHSLLQAARE--ADLAKVKKTLALEII-NFKQP 208 (351)
T ss_dssp HHHHCSSHH----------------HHHHHHHHHH------------HHHHHHHHHT--TCHHHHHHHTTTCCT-TCCCT
T ss_pred chHHHhhhh----------------hHHHHHhhhc------------ccHHHHHHHh--ccHHHHHHHHHhhcc-cccCC
Confidence 999998621 4444544432 3456666666 677778777776654 33466
Q ss_pred cCCCcHHHHHHHc---CCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHH
Q 015738 241 QYGWTPIHYAAYY---GNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLH 317 (401)
Q Consensus 241 ~~~~t~L~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~ 317 (401)
..+.||||+|+.. ++.+++++|++.|.++ +..+. .|.||||.|+..|+.+++++|+++|.+ ++.+|..|+||||
T Consensus 209 ~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~n~~d~~g~t~L~ 285 (351)
T 3utm_A 209 QSHETALHCAVASLHPKRKQVAELLLRKGANV-NEKNK-DFMTPLHVAAERAHNDVMEVLHKHGAK-MNALDSLGQTALH 285 (351)
T ss_dssp TTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCT-TCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHH
T ss_pred CCCCCHHHHHHHHhCccHHHHHHHHHHcCCCc-CCcCC-CCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHH
Confidence 7799999999999 5689999999999887 34443 799999999999999999999999988 7889999999999
Q ss_pred HHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHHhhcCCChhhhhccCcceeeeeec
Q 015738 318 YAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRSTQANYDAVNKQNVSVRHVFNY 392 (401)
Q Consensus 318 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 392 (401)
+|+..++.+++++|++ .|++++.+|..|.||+++| ..+++++|.+... .....+.+++..|.+
T Consensus 286 ~A~~~~~~~~v~~Ll~----~gad~~~~~~~g~tal~~a----~~~~~~~l~~~~~----~~~~~~~~~l~~A~~ 348 (351)
T 3utm_A 286 RAALAGHLQTCRLLLS----YGSDPSIISLQGFTAAQMG----NEAVQQILSESTP----MRTSDVDYRLLEASK 348 (351)
T ss_dssp HHHHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHS----CHHHHHHHHHC---------------------
T ss_pred HHHHcCcHHHHHHHHH----cCCCCCCcCCCCCChhhhh----hHHHHHHHHhccc----cccCcceeehhhhhc
Confidence 9999999999999999 8999999999999999998 5567777765522 344567778877743
No 6
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.4e-45 Score=311.17 Aligned_cols=265 Identities=23% Similarity=0.278 Sum_probs=239.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhc-cCCCChHHHHHHHcCCHHHHHHHHhcCCCC
Q 015738 72 KGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMV-NNEKNTALHEAVSQGNVDVVKILTREDPGY 150 (401)
Q Consensus 72 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~ 150 (401)
+|.||||.|+..|+.++|++|+++|+++ +.. +..|.||||+|+..|+.+++++|+++|+++
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~~------------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~ 65 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEGGANV------------------NFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP 65 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCT------------------TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCc------------------ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 5789999999999999999999999875 333 667999999999999999999999999885
Q ss_pred CCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccchHHHHHH
Q 015738 151 PYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLLE 230 (401)
Q Consensus 151 ~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~ 230 (401)
...+..|.||||+|+. .++.+++++|++.|++++..+..|.||||+|+.. ++.+.+++|+.
T Consensus 66 -~~~~~~g~t~L~~A~~----------------~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~--~~~~~~~~Ll~ 126 (285)
T 1wdy_A 66 -VLRKKNGATPFLLAAI----------------AGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVY--GKVKALKFLYK 126 (285)
T ss_dssp -TCCCTTCCCHHHHHHH----------------HTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHT--TCHHHHHHHHH
T ss_pred -cccCCCCCCHHHHHHH----------------cCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHh--CCHHHHHHHHH
Confidence 4678899999999998 3389999999999999999999999999999998 88999999998
Q ss_pred hhccccccc----------ccCCCcHHHHHHHcCCHHHHHHHHhc-CccccccccCCCCchHHHHHHhcCC----HHHHH
Q 015738 231 KKKNLIKET----------DQYGWTPIHYAAYYGNYRTVNLLLET-DQSASNIADKDRKMTALHLAAGKGD----ARTVE 295 (401)
Q Consensus 231 ~~~~~~~~~----------~~~~~t~L~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~g~t~L~~a~~~~~----~~~~~ 295 (401)
.+.. ++.. +..|.||||+|+..|+.+++++|++. +.++ +..+. .|.||||.|+..++ .++++
T Consensus 127 ~g~~-~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-~~~~~-~g~t~l~~a~~~~~~~~~~~i~~ 203 (285)
T 1wdy_A 127 RGAN-VNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADV-NACDN-MGRNALIHALLSSDDSDVEAITH 203 (285)
T ss_dssp TTCC-TTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCT-TCCCT-TSCCHHHHHHHCSCTTTHHHHHH
T ss_pred hCCC-cccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCC-CccCC-CCCCHHHHHHHccccchHHHHHH
Confidence 8654 4444 67799999999999999999999987 7665 44443 78999999999999 99999
Q ss_pred HhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHHhhcCCC
Q 015738 296 RIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRSTQAN 375 (401)
Q Consensus 296 ~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~ 375 (401)
+|++.|.+ ++.++..|+||||+|+..++.+++++|++. .|++++.+|..|.||||+|+..++.+++++|++. |++
T Consensus 204 ~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~-Ga~ 278 (285)
T 1wdy_A 204 LLLDHGAD-VNVRGERGKTPLILAVEKKHLGLVQRLLEQ---EHIEINDTDSDGKTALLLAVELKLKKIAELLCKR-GAS 278 (285)
T ss_dssp HHHHTTCC-SSCCCTTSCCHHHHHHHTTCHHHHHHHHHS---SSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-SSC
T ss_pred HHHHcCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhc---cCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHc-CCC
Confidence 99999988 688999999999999999999999999984 5899999999999999999999999999999977 999
Q ss_pred hhhhhc
Q 015738 376 YDAVNK 381 (401)
Q Consensus 376 ~~~~~~ 381 (401)
++.+|.
T Consensus 279 ~~~~d~ 284 (285)
T 1wdy_A 279 TDCGDL 284 (285)
T ss_dssp SCCSSC
T ss_pred CCcccc
Confidence 998873
No 7
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=2.3e-46 Score=324.63 Aligned_cols=292 Identities=20% Similarity=0.167 Sum_probs=252.0
Q ss_pred chhhhhhhhcCCCCchhhhhhHHHHHHHHhh-cCCCeeEEeecchhhhhchHHHHHHHHhhCChhhhcccCCCCcHHHHH
Q 015738 2 DLNFFKAASAGNSEPFKDMERDVIERLLTAK-AKNTILHINIISSERENVSTKFVEEILEKCPALLLQVNAKGDTPLHLA 80 (401)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~-~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A 80 (401)
+|+||.||+.|++++|++||++|++.+..+. .|.||||+| +..|+.+++++|++ .|++++..+..+.+|++.+
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A--~~~g~~~iv~~Ll~----~ga~~~~~~~~~~~~~~~~ 99 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNA--VQMSREDIVELLLR----HGADPVLRKKNGATPFILA 99 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHH--HHTTCHHHHHHHHH----TTCCTTCCCTTCCCHHHHH
T ss_pred ChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHH--HHcCCHHHHHHHHH----cCCchhhhccCCCchhHHH
Confidence 4789999999999999999999998876554 599999999 99999999999999 7999999999999999999
Q ss_pred HHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCC--------
Q 015738 81 AKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYPY-------- 152 (401)
Q Consensus 81 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~-------- 152 (401)
+..+...++..+++.+++ ++..+..|.||||+|+..|+.+++++|+++|+++..
T Consensus 100 ~~~~~~~~~~~~~~~~~~------------------~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~ 161 (337)
T 4g8k_A 100 AIAGSVKLLKLFLSKGAD------------------VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQ 161 (337)
T ss_dssp HHHTCHHHHHHHHTTTCC------------------TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC---
T ss_pred HhcccchhhHHhhhccch------------------hhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhcccccc
Confidence 999999999999999887 467888999999999999999999999999987532
Q ss_pred -CCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHh-cCCCCccCCCCCCcHHhHHHhhcc-cccchHHHHH
Q 015738 153 -SANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLE-NSTSVSHEGPNGKTALHAAAMRSF-AVDTALPKLL 229 (401)
Q Consensus 153 -~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~-~~~~~~~~~~~~~t~l~~a~~~~~-~~~~~~~~ll 229 (401)
..+..|.||||+|+. .++.+++++|++ .|++++..+..|.++++.++.... ...+.+..+|
T Consensus 162 ~~~~~~g~T~L~~A~~----------------~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lL 225 (337)
T 4g8k_A 162 ERLRKGGATALMDAAE----------------KGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLL 225 (337)
T ss_dssp --CTTCSCCHHHHHHH----------------HTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHH
T ss_pred ccccCCCCcHHHHHHH----------------CCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHH
Confidence 234568999999998 338999999996 699999999999999998876521 2234455555
Q ss_pred HhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhc-CccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCcccc
Q 015738 230 EKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLET-DQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELV 308 (401)
Q Consensus 230 ~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~ 308 (401)
...+.+++.++..|.||||+|+..|+.+++++|++. +.++ +..+. .|.||||+|++.|+.+++++|+++|++ ++
T Consensus 226 l~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~v-n~~d~-~G~TpL~~A~~~g~~~iv~~Ll~~GAd-~n-- 300 (337)
T 4g8k_A 226 LDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEI-NDTDS-DGKTALLLAVELKLKKIAELLCKRGAS-TD-- 300 (337)
T ss_dssp HHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCT-TCBCT-TSCBHHHHHHHTTCHHHHHHHHTTSCS-ST--
T ss_pred HHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcc-cCcCC-CCCCHHHHHHHcCCHHHHHHHHHCCCC-CC--
Confidence 555666899999999999999999999999999986 4454 44444 899999999999999999999999987 33
Q ss_pred CCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccC
Q 015738 309 DNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEG 345 (401)
Q Consensus 309 ~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~ 345 (401)
+.+|||+|++.++.+++++||+ .|+++|..
T Consensus 301 ---~~~~L~~A~~~~~~~iv~~Ll~----~GA~~d~~ 330 (337)
T 4g8k_A 301 ---CGDLVMTARRNYDHSLVKVLLS----HGAKEDFH 330 (337)
T ss_dssp ---TCCHHHHHHHTTCHHHHHHHHH----TTCCC---
T ss_pred ---CCCHHHHHHHcCCHHHHHHHHH----CcCCCCCC
Confidence 4579999999999999999999 88988864
No 8
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=6.1e-45 Score=308.72 Aligned_cols=265 Identities=22% Similarity=0.203 Sum_probs=239.5
Q ss_pred cCCCeeEEeecchhhhhchHHHHHHHHhhCChhhhcc-cCCCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCch
Q 015738 33 AKNTILHINIISSERENVSTKFVEEILEKCPALLLQV-NAKGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGVE 111 (401)
Q Consensus 33 ~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 111 (401)
.|.|+||+| +..|+.+++++|++ .+.+++.. +..|.||||+|+..|+.+++++|+++|+++
T Consensus 4 ~g~~~L~~A--~~~g~~~~v~~Ll~----~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~------------ 65 (285)
T 1wdy_A 4 EDNHLLIKA--VQNEDVDLVQQLLE----GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP------------ 65 (285)
T ss_dssp HHHHHHHHH--HHTTCHHHHHHHHH----TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT------------
T ss_pred ccchHHHHH--HHcCCHHHHHHHHH----cCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC------------
Confidence 488999999 99999999999988 67888877 788999999999999999999999999884
Q ss_pred hhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHH
Q 015738 112 PFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVL 191 (401)
Q Consensus 112 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~ 191 (401)
+..+..|.||||+|+..|+.+++++|+++|+++ ...+..|.|||++|+. .++.++++
T Consensus 66 ------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~----------------~~~~~~~~ 122 (285)
T 1wdy_A 66 ------VLRKKNGATPFLLAAIAGSVKLLKLFLSKGADV-NECDFYGFTAFMEAAV----------------YGKVKALK 122 (285)
T ss_dssp ------TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTCCBHHHHHHH----------------TTCHHHHH
T ss_pred ------cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCcccCCHHHHHHH----------------hCCHHHHH
Confidence 566788999999999999999999999999884 4778889999999998 34899999
Q ss_pred HHHhcCCCCccC----------CCCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCC----HH
Q 015738 192 ALLENSTSVSHE----------GPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGN----YR 257 (401)
Q Consensus 192 ~Ll~~~~~~~~~----------~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~----~~ 257 (401)
+|++.|++++.. +..|.||||+|+.. ++.+.+++|+...+..++..+..|.||||+|+..++ .+
T Consensus 123 ~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 200 (285)
T 1wdy_A 123 FLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK--GHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEA 200 (285)
T ss_dssp HHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHH--TCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHH
T ss_pred HHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHc--CCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHH
Confidence 999999999877 77899999999999 899999999998777789999999999999999999 99
Q ss_pred HHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhh-cCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCC
Q 015738 258 TVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIIS-GNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNP 336 (401)
Q Consensus 258 ~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~ 336 (401)
++++|++.|+++ +..+. .|.||||+|+..|+.+++++|++ .+.+ ++.+|..|+||||+|+..++.+++++|++
T Consensus 201 i~~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~--- 274 (285)
T 1wdy_A 201 ITHLLLDHGADV-NVRGE-RGKTPLILAVEKKHLGLVQRLLEQEHIE-INDTDSDGKTALLLAVELKLKKIAELLCK--- 274 (285)
T ss_dssp HHHHHHHTTCCS-SCCCT-TSCCHHHHHHHTTCHHHHHHHHHSSSCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH---
T ss_pred HHHHHHHcCCCC-CCcCC-CCCcHHHHHHHcCCHHHHHHHHhccCCC-ccccCCCCCcHHHHHHHcCcHHHHHHHHH---
Confidence 999999999887 34443 79999999999999999999999 5555 78999999999999999999999999999
Q ss_pred ccccccccCCC
Q 015738 337 LARSLIDEGDA 347 (401)
Q Consensus 337 ~~~~~~~~~~~ 347 (401)
.|++++.+|.
T Consensus 275 -~Ga~~~~~d~ 284 (285)
T 1wdy_A 275 -RGASTDCGDL 284 (285)
T ss_dssp -HSSCSCCSSC
T ss_pred -cCCCCCcccc
Confidence 8999998873
No 9
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-45 Score=323.47 Aligned_cols=313 Identities=17% Similarity=0.167 Sum_probs=227.2
Q ss_pred hhhhhhhhcCCCCchhhhhhHHHHHHHHhhcCCCeeEEeecchhhhhchHHHHHHHHhhCChhhhcccCCCCcHHHHHHH
Q 015738 3 LNFFKAASAGNSEPFKDMERDVIERLLTAKAKNTILHINIISSERENVSTKFVEEILEKCPALLLQVNAKGDTPLHLAAK 82 (401)
Q Consensus 3 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~ 82 (401)
.+|+.|+..|+.+.++.++++..... .-.+++.-+ ...|+.+++++++. ..++..|.||||+|+.
T Consensus 39 ~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~~g~~~~~~~~~~---------~~~~~~g~t~L~~Aa~ 103 (373)
T 2fo1_E 39 HSLLEASYDGYIKRQRNELQHYSLYP----NPQGYGNGN--DFLGDFNHTNLQIP---------TEPEPESPIKLHTEAA 103 (373)
T ss_dssp ----------------------------------------------------------------------CCCHHHHHHH
T ss_pred cccccccCCccccchhhhhhhhcccc----CccccCCCC--Cccccccccccccc---------cCCCCCCccHHHHHhc
Confidence 46788888889999988888644321 134455667 77788888888755 2468899999999999
Q ss_pred cCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhcc-CCCChHHHHHHHcCCHHHHHHHH--------hcCCCCCCC
Q 015738 83 FGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVN-NEKNTALHEAVSQGNVDVVKILT--------REDPGYPYS 153 (401)
Q Consensus 83 ~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll--------~~~~~~~~~ 153 (401)
.+ .+++++|+... ++..+ ..|.||||+|+..|+.+++++|+ +.|.++ +.
T Consensus 104 ~~-~~~~~~L~~~~--------------------~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~v-n~ 161 (373)
T 2fo1_E 104 GS-YAITEPITRES--------------------VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADV-NA 161 (373)
T ss_dssp SS-SCCCSCCSTTT--------------------TTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCT-TC
T ss_pred CC-chHHHHhcccc--------------------ccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCC-cC
Confidence 55 47888876532 34556 68999999999999998888776 678874 47
Q ss_pred CCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccchHHHHHHhhc
Q 015738 154 ANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLLEKKK 233 (401)
Q Consensus 154 ~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~ 233 (401)
.|..|.||||+|+. .++.+++++|++.|++++..+..|.||||+|+.. ++.+.++.|+..+.
T Consensus 162 ~d~~g~TpL~~A~~----------------~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~--g~~~~v~~Ll~~~~ 223 (373)
T 2fo1_E 162 MDCDENTPLMLAVL----------------ARRRRLVAYLMKAGADPTIYNKSERSALHQAAAN--RDFGMMVYMLNSTK 223 (373)
T ss_dssp CCTTSCCHHHHHHH----------------HTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHT--TCHHHHHHHTTSHH
T ss_pred CCCCCCCHHHHHHH----------------cChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHC--CCHHHHHHHHhcCc
Confidence 78899999999998 3389999999999999999999999999999999 88999999998763
Q ss_pred --ccccccccCCCcHHHHHHHcC---CHHHHHHHHhcCcccccc------ccCCCCchHHHHHHhcCCHHHHHHhhhcCC
Q 015738 234 --NLIKETDQYGWTPIHYAAYYG---NYRTVNLLLETDQSASNI------ADKDRKMTALHLAAGKGDARTVERIISGNP 302 (401)
Q Consensus 234 --~~~~~~~~~~~t~L~~a~~~~---~~~~~~~Ll~~~~~~~~~------~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~ 302 (401)
..++..+..|.||||+|+..+ +.+++++|++.|++.... .....|.||||+|+..|+.+++++|++.+.
T Consensus 224 ~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~ 303 (373)
T 2fo1_E 224 LKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKG 303 (373)
T ss_dssp HHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSC
T ss_pred cccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcC
Confidence 557888999999999999998 899999999999887431 123478999999999999999999999885
Q ss_pred CCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHHhhcCCC
Q 015738 303 KCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRSTQAN 375 (401)
Q Consensus 303 ~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~ 375 (401)
..++.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|++. +++
T Consensus 304 ~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~----~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~-~a~ 371 (373)
T 2fo1_E 304 SNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQ----QGASVEAVDATDHTARQLAQANNHHNIVDIFDRC-RPE 371 (373)
T ss_dssp CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH----TTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTT-C--
T ss_pred CCccCcCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhc-Ccc
Confidence 5589999999999999999999999999999 8999999999999999999999999999999966 654
No 10
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.9e-43 Score=296.86 Aligned_cols=273 Identities=16% Similarity=0.110 Sum_probs=203.7
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCC
Q 015738 69 VNAKGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDP 148 (401)
Q Consensus 69 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~ 148 (401)
....|.|+||+|+..|+.+.+..++..+...... ...+...+...+..|.||||+|+..|+.+++++|++.|.
T Consensus 11 ~~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~-------~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~ 83 (285)
T 3d9h_A 11 SSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPG-------IRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGW 83 (285)
T ss_dssp -------------------------------CCS-------EECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred cchHHHHHHHHHhhcCCCCCcccCCCCccccccc-------hhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 3457899999999999988888877765442100 000111145678899999999999999999999999998
Q ss_pred CCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccchHHHH
Q 015738 149 GYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKL 228 (401)
Q Consensus 149 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~l 228 (401)
++ ...+..|.||||+|+. .++.+++++|++.|++++..+..|.||||+|+.. ++.+.++.|
T Consensus 84 ~~-~~~~~~g~t~L~~A~~----------------~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~--~~~~~v~~L 144 (285)
T 3d9h_A 84 AV-NIITADHVSPLHEACL----------------GGHLSCVKILLKHGAQVNGVTADWHTPLFNACVS--GSWDCVNLL 144 (285)
T ss_dssp CS-CEECTTCCCHHHHHHH----------------TTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHH--TCHHHHHHH
T ss_pred CC-CCcCCCCCCHHHHHHH----------------CCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc--CHHHHHHHH
Confidence 84 4788899999999998 3489999999999999999999999999999999 889999999
Q ss_pred HHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCcccc
Q 015738 229 LEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELV 308 (401)
Q Consensus 229 l~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~ 308 (401)
+..+.. ++. +..|.||||+|+..|+.+++++|++.|+++ +..+. .|.||||.|+..|+.+++++|++.+++ ++ .
T Consensus 145 l~~g~~-~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~-~ 218 (285)
T 3d9h_A 145 LQHGAS-VQP-ESDLASPIHEAARRGHVECVNSLIAYGGNI-DHKIS-HLGTPLYLACENQQRACVKKLLESGAD-VN-Q 218 (285)
T ss_dssp HHTTCC-SSC-SCTTSCHHHHHHHHTCHHHHHHHHHTTCCT-TCCBT-TTBCHHHHHHHTTCHHHHHHHHHTTCC-TT-C
T ss_pred HHCCCC-CCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCC-CCCCHHHHHHHcCcHHHHHHHHHCCCC-CC-C
Confidence 987655 443 345999999999999999999999999887 44444 788999999999999999999999988 45 4
Q ss_pred CCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHHhhcCCChhhh
Q 015738 309 DNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRSTQANYDAV 379 (401)
Q Consensus 309 ~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~ 379 (401)
+..|+||||+|+..++.+++++|++ .|++++.+|..|+||||+|+ ++.+++++|++..|+++..+
T Consensus 219 ~~~g~t~L~~A~~~~~~~~v~~Ll~----~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~l~~~ 283 (285)
T 3d9h_A 219 GKGQDSPLHAVVRTASEELACLLMD----FGADTQAKNAEGKRPVELVP--PESPLAQLFLEREGASLPKP 283 (285)
T ss_dssp CBTTBCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC-------
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHH----CCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhccCCCCC
Confidence 8899999999999999999999999 89999999999999999999 55789999998888887643
No 11
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=3.1e-42 Score=291.55 Aligned_cols=264 Identities=20% Similarity=0.136 Sum_probs=180.6
Q ss_pred hhcccCCCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHh
Q 015738 66 LLQVNAKGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTR 145 (401)
Q Consensus 66 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 145 (401)
++.+|..|+||||+||..|+.++|++|+++|++.. .++..+..|.||||+|+..|+.+++++|++
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 66 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHE---------------YLDLQNDLGQTALHLAAILGEASTVEKLYA 66 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSG---------------GGGCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc---------------cccccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 45678999999999999999999999999988731 145678889999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccchH
Q 015738 146 EDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDTAL 225 (401)
Q Consensus 146 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ 225 (401)
+|+++ ...+..|.||||+|+. .++.+++++|++.|++......... + ..
T Consensus 67 ~ga~~-~~~~~~g~tpL~~A~~----------------~~~~~~v~~Ll~~~~~~~~~~~~~~--~--~~---------- 115 (282)
T 1oy3_D 67 AGAGV-LVAERGGHTALHLACR----------------VRAHTCACVLLQPRPSHPRDASDTY--L--TQ---------- 115 (282)
T ss_dssp TTCCS-SCCCTTSCCHHHHHTT----------------TTCHHHHHHHSSSCCSSCCCC---------------------
T ss_pred cCCCC-CCCCCCCCCHHHHHHH----------------cCCcchhHhhhccCCCCchhhHHHH--h--hc----------
Confidence 99885 4778889999999998 3488999999999887643221110 0 00
Q ss_pred HHHHHhhcccccccccCCCcHHHHHHHcCCH-HHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCC
Q 015738 226 PKLLEKKKNLIKETDQYGWTPIHYAAYYGNY-RTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKC 304 (401)
Q Consensus 226 ~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~-~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~ 304 (401)
. .......+.++++.++..+.. .....+...+.+. +..+ ..|.||||.|+..|+.+++++|++.|++
T Consensus 116 ------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~- 183 (282)
T 1oy3_D 116 ------S---QDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQL-EAEN-YDGHTPLHVAVIHKDAEMVRLLRDAGAD- 183 (282)
T ss_dssp -------------------------------------CCCGGGGT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHHTCC-
T ss_pred ------c---cccCcchhcchhhhccccccchhhhhhhhhhhhcC-CCcC-CCCcCHHHHHHHcCCHHHHHHHHHcCCC-
Confidence 0 011122345556655554433 3333344444433 3333 3788899999988999999999988887
Q ss_pred ccccCC-CCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHHhhcCCChhhhhccC
Q 015738 305 YELVDN-RGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRSTQANYDAVNKQN 383 (401)
Q Consensus 305 ~~~~~~-~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g 383 (401)
++.++. .|+||||+|+..++.+++++|++ .|++++.+|..|+||||+|+..++.+++++|++. |++++.+|..|
T Consensus 184 ~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~----~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g 258 (282)
T 1oy3_D 184 LNKPEPTCGRTPLHLAVEAQAASVLELLLK----AGADPTARMYGGRTPLGSALLRPNPILARLLRAH-GAPEPEDGGDK 258 (282)
T ss_dssp TTCCCTTTCCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHT-TCCCCCCC---
T ss_pred CCCCCCCCCcCHHHHHHHcCCHHHHHHHHH----cCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHc-CCCcCcCCCcc
Confidence 456664 48999999999999999999998 7889999999999999999999999999888865 99999999999
Q ss_pred cceeeeeec
Q 015738 384 VSVRHVFNY 392 (401)
Q Consensus 384 ~t~l~~a~~ 392 (401)
.||+++|..
T Consensus 259 ~tpl~~a~~ 267 (282)
T 1oy3_D 259 LSPCSSSGS 267 (282)
T ss_dssp ---------
T ss_pred cccccccCC
Confidence 999998844
No 12
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=6.4e-43 Score=306.25 Aligned_cols=275 Identities=20% Similarity=0.171 Sum_probs=220.3
Q ss_pred hhhhhhcCCCCchhhhhhHHHHHHHHhhcCCCeeEEeecchhhhhchHHHHHHHHhhCChhhhccc-CCCCcHHHHHHHc
Q 015738 5 FFKAASAGNSEPFKDMERDVIERLLTAKAKNTILHINIISSERENVSTKFVEEILEKCPALLLQVN-AKGDTPLHLAAKF 83 (401)
Q Consensus 5 l~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~g~t~L~~A~~~ 83 (401)
+..+...|+.+++++++.. ..+..|.|+||+| +..+ .+++++|+. .+++..| ..|.||||+||..
T Consensus 70 ~~~~~~~g~~~~~~~~~~~-----~~~~~g~t~L~~A--a~~~-~~~~~~L~~------~~~n~~d~~~g~t~Lh~Aa~~ 135 (373)
T 2fo1_E 70 GNGNDFLGDFNHTNLQIPT-----EPEPESPIKLHTE--AAGS-YAITEPITR------ESVNIIDPRHNRTVLHWIASN 135 (373)
T ss_dssp -----------------------------CCCHHHHH--HHSS-SCCCSCCST------TTTTTCCCSSCCCHHHHHHCT
T ss_pred CCCCCcccccccccccccc-----CCCCCCccHHHHH--hcCC-chHHHHhcc------ccccccCCcCCCCHHHHHHHC
Confidence 3456666888888887754 3455699999999 8854 578887733 4677788 7899999999999
Q ss_pred CCHHHHHHHH--------HhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCC
Q 015738 84 GHFEIVRVLI--------ERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYPYSAN 155 (401)
Q Consensus 84 ~~~~~v~~Ll--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~ 155 (401)
|+.+++++|+ +.|++ ++..|..|.||||+|+..|+.+++++|+++|+++. ..+
T Consensus 136 g~~~~v~~Ll~~~~~~ll~~ga~------------------vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~-~~~ 196 (373)
T 2fo1_E 136 SSAEKSEDLIVHEAKECIAAGAD------------------VNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPT-IYN 196 (373)
T ss_dssp TCCSCCTTHHHHHHHHHHHTCCC------------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCC
T ss_pred CCHHHHHHHHHHHHHHHHhcCCC------------------CcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCc-ccC
Confidence 9999988887 56666 46778899999999999999999999999999854 778
Q ss_pred CCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcC---CCCccCCCCCCcHHhHHHhhccc---ccchHHHHH
Q 015738 156 NYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENS---TSVSHEGPNGKTALHAAAMRSFA---VDTALPKLL 229 (401)
Q Consensus 156 ~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~---~~~~~~~~~~~t~l~~a~~~~~~---~~~~~~~ll 229 (401)
..|.||||+|+. .++.+++++|++.+ ++++..+..|.||||+|+.. + ..+.++.|+
T Consensus 197 ~~g~t~L~~A~~----------------~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~--~~~~~~~~v~~Ll 258 (373)
T 2fo1_E 197 KSERSALHQAAA----------------NRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHN--EGRDQVASAKLLV 258 (373)
T ss_dssp TTCCCHHHHHHH----------------TTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHS--CSTTHHHHHHHHH
T ss_pred CCCCCHHHHHHH----------------CCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHh--CCcchHHHHHHHH
Confidence 899999999998 44899999999998 89999999999999999987 5 678888888
Q ss_pred Hhhcccccc--------cccCCCcHHHHHHHcCCHHHHHHHHhcC-ccccccccCCCCchHHHHHHhcCCHHHHHHhhhc
Q 015738 230 EKKKNLIKE--------TDQYGWTPIHYAAYYGNYRTVNLLLETD-QSASNIADKDRKMTALHLAAGKGDARTVERIISG 300 (401)
Q Consensus 230 ~~~~~~~~~--------~~~~~~t~L~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~ 300 (401)
..+.. ++. .+..|.||||+|+..|+.+++++|++.+ .++ +..+. .|.||||+|+..|+.+++++|+++
T Consensus 259 ~~g~~-~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~-n~~d~-~g~TpL~~A~~~g~~~iv~~Ll~~ 335 (373)
T 2fo1_E 259 EKGAK-VDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNK-DKQDE-DGKTPIMLAAQEGRIEVVMYLIQQ 335 (373)
T ss_dssp HHTCC-SSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCT-TCCCT-TCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HCCCC-cccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCc-cCcCC-CCCCHHHHHHHcCCHHHHHHHHHc
Confidence 87654 433 5668999999999999999999999887 554 44444 899999999999999999999999
Q ss_pred CCCCccccCCCCCcHHHHHHHhCChhHHHHHHhc
Q 015738 301 NPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLEN 334 (401)
Q Consensus 301 ~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 334 (401)
|++ ++.+|..|+||||+|+..++.+++++|++.
T Consensus 336 gad-~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~ 368 (373)
T 2fo1_E 336 GAS-VEAVDATDHTARQLAQANNHHNIVDIFDRC 368 (373)
T ss_dssp TCC-SSCCCSSSCCHHHHHHHTTCHHHHHHHHTT
T ss_pred CCC-ccCCCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 988 788999999999999999999999999993
No 13
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=7.5e-42 Score=283.66 Aligned_cols=230 Identities=19% Similarity=0.198 Sum_probs=181.6
Q ss_pred hHhccCCCChHHHHHHHcC-------------CHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhcc
Q 015738 117 IRMVNNEKNTALHEAVSQG-------------NVDVVKILTREDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRT 183 (401)
Q Consensus 117 ~~~~~~~g~t~L~~A~~~~-------------~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~ 183 (401)
++.+|.+|.||||+|+..| +.+++++|++.|++.....+..|.||||+|+.
T Consensus 3 vn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~---------------- 66 (253)
T 1yyh_A 3 VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAAR---------------- 66 (253)
T ss_dssp -------------------------------------------------CCCTTSCCHHHHHHH----------------
T ss_pred CCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHH----------------
Confidence 5678899999999999977 89999999999999877789999999999998
Q ss_pred CCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHH
Q 015738 184 SASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLL 263 (401)
Q Consensus 184 ~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll 263 (401)
.++.+++++|++.|++++..+..|.||||+|+.. ++.+.++.|+..+...++..+..|.||||+|+..|+.+++++|+
T Consensus 67 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 144 (253)
T 1yyh_A 67 YSRSDAAKRLLEASADANIQDNMGRTPLHAAVSA--DAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLI 144 (253)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH--TCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc--CCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHH
Confidence 3489999999999999999999999999999999 88999999999988778899999999999999999999999999
Q ss_pred hcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccc
Q 015738 264 ETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLID 343 (401)
Q Consensus 264 ~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~ 343 (401)
+.|+++ +..+. .|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..++.+++++|++ .|++++
T Consensus 145 ~~g~~~-~~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~----~ga~~~ 217 (253)
T 1yyh_A 145 NSHADV-NAVDD-LGKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNREETPLFLAAREGSYETAKVLLD----HFANRD 217 (253)
T ss_dssp HTTCCT-TCBCT-TSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHH----TTCCTT
T ss_pred HcCCCC-CCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHH----cCCCcc
Confidence 999887 34443 799999999999999999999999988 68899999999999999999999999999 899999
Q ss_pred cCCCCCCcHHHHHHHhCChhHHHHHHhh
Q 015738 344 EGDAEGNTPLHVLAAVRPKEFHDVMNRS 371 (401)
Q Consensus 344 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 371 (401)
.+|..|+||||+|++.|+.+++++|...
T Consensus 218 ~~d~~g~tpl~~A~~~g~~~i~~~l~~~ 245 (253)
T 1yyh_A 218 ITDHMDRLPRDIAQERMHHDIVRLLDLE 245 (253)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHC-
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999999999999999999865
No 14
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.1e-42 Score=290.62 Aligned_cols=244 Identities=17% Similarity=0.151 Sum_probs=197.1
Q ss_pred cCCCChHHHHHHHcCCHHHHHHHHhcCC----------CCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHH
Q 015738 121 NNEKNTALHEAVSQGNVDVVKILTREDP----------GYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMV 190 (401)
Q Consensus 121 ~~~g~t~L~~A~~~~~~~~~~~Ll~~~~----------~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~ 190 (401)
...|.|++|+|+..|+.+.+..++..++ ......+..|.||||+|+. .++.+++
T Consensus 12 ~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~----------------~g~~~~v 75 (285)
T 3d9h_A 12 SGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAI----------------HGHQLSL 75 (285)
T ss_dssp ------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHH----------------TTCHHHH
T ss_pred chHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHH----------------cCCHHHH
Confidence 4578999999999999777777655432 2234678899999999999 4489999
Q ss_pred HHHHhcCCCCccCCCCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCcccc
Q 015738 191 LALLENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSAS 270 (401)
Q Consensus 191 ~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~ 270 (401)
++|++.|++++..+..|.||||+|+.. ++.+.++.|++.+ .+++..+..|.||||+|+..|+.+++++|++.+++..
T Consensus 76 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~--g~~~~v~~Ll~~g-a~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 152 (285)
T 3d9h_A 76 RNLISQGWAVNIITADHVSPLHEACLG--GHLSCVKILLKHG-AQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ 152 (285)
T ss_dssp HHHHHTTCCSCEECTTCCCHHHHHHHT--TCHHHHHHHHHTT-CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS
T ss_pred HHHHHCCCCCCCcCCCCCCHHHHHHHC--CcHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCC
Confidence 999999999999999999999999999 8899999999875 4488899999999999999999999999999998863
Q ss_pred ccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCC
Q 015738 271 NIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGN 350 (401)
Q Consensus 271 ~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~ 350 (401)
. ...|.||||.|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..++.+++++|++ .|++++. +..|.
T Consensus 153 ~---~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~-~~~g~ 223 (285)
T 3d9h_A 153 P---ESDLASPIHEAARRGHVECVNSLIAYGGN-IDHKISHLGTPLYLACENQQRACVKKLLE----SGADVNQ-GKGQD 223 (285)
T ss_dssp C---SCTTSCHHHHHHHHTCHHHHHHHHHTTCC-TTCCBTTTBCHHHHHHHTTCHHHHHHHHH----TTCCTTC-CBTTB
T ss_pred C---CCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHH----CCCCCCC-CCCCC
Confidence 2 23589999999999999999999999988 68899999999999999999999999999 7889985 88999
Q ss_pred cHHHHHHHhCChhHHHHHHhhcCCChhhhhccCcceeeeeecc
Q 015738 351 TPLHVLAAVRPKEFHDVMNRSTQANYDAVNKQNVSVRHVFNYG 393 (401)
Q Consensus 351 t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~ 393 (401)
||||+|+..++.+++++|++. |+|++.+|..|+||+++|...
T Consensus 224 t~L~~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~t~l~~A~~~ 265 (285)
T 3d9h_A 224 SPLHAVVRTASEELACLLMDF-GADTQAKNAEGKRPVELVPPE 265 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCGGGGSCTT
T ss_pred CHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHhcCc
Confidence 999999999999999999976 999999999999999999743
No 15
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=4.5e-42 Score=286.23 Aligned_cols=238 Identities=22% Similarity=0.251 Sum_probs=159.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCC
Q 015738 72 KGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYP 151 (401)
Q Consensus 72 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~ 151 (401)
+|+||||+||..|+.++|++|+++|+++ +..+..|.||||+|+..|+.+++++|+++|+++
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~------------------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~- 62 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAV------------------NIITADHVSPLHEACLGGHLSCVKILLKHGAQV- 62 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCS------------------SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCC------------------CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-
Confidence 5789999999999999999999988774 566778899999999999999999999888774
Q ss_pred CCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccchHHHHHHh
Q 015738 152 YSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLLEK 231 (401)
Q Consensus 152 ~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~ 231 (401)
...+..|.||||+|+. .++.+++++|++.|++++.. ..
T Consensus 63 ~~~~~~g~t~L~~A~~----------------~~~~~~v~~Ll~~g~~~~~~-~~------------------------- 100 (261)
T 2xai_A 63 NGVTADWHTPLFNACV----------------SGSWDCVNLLLQHGASVQPE-SD------------------------- 100 (261)
T ss_dssp TCCCTTSCCHHHHHHH----------------HTCHHHHHHHHHTTCCSSCS-CT-------------------------
T ss_pred CCCCCCCCCHHHHHHH----------------cCCHHHHHHHHHCCCCCCCC-CC-------------------------
Confidence 4677888888888887 33788888888888776532 12
Q ss_pred hcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCC
Q 015738 232 KKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNR 311 (401)
Q Consensus 232 ~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 311 (401)
|.||||+|+..|+.+++++|++.|+++ +..+. .|.||||.|+..++.+++++|++.|++ ++ .+..
T Consensus 101 -----------g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~-~~~~ 165 (261)
T 2xai_A 101 -----------LASPIHEAARRGHVECVNSLIAYGGNI-DHKIS-HLGTPLYLACENQQRACVKKLLESGAD-VN-QGKG 165 (261)
T ss_dssp -----------TCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBT-TTBCHHHHHHHTTCHHHHHHHHHHTCC-TT-CCBT
T ss_pred -----------CCCHHHHHHHcCcHHHHHHHHHcCCCC-CcCCC-CCCCHHHHHHHhCCHHHHHHHHHcCCC-CC-CCCC
Confidence 455666666666666666666666554 22222 455666666666666666666666655 23 2556
Q ss_pred CCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHHhhcC-------CChhhhhccCc
Q 015738 312 GCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRSTQ-------ANYDAVNKQNV 384 (401)
Q Consensus 312 g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~-------~~~~~~~~~g~ 384 (401)
|+||||+|+..++.+++++|++ .|++++.+|..|+||||+|+..+ +++++|++..+ ++++.+|..|+
T Consensus 166 g~t~Lh~A~~~~~~~~v~~Ll~----~gad~~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~~~l~~~~~~~~r~~~g~ 239 (261)
T 2xai_A 166 QDSPLHAVARTASEELACLLMD----FGADTQAKNAEGKRPVELVPPES--PLAQLFLEREGPPSLMQLCRLRIRKCFGI 239 (261)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHH----TTCCTTCCCTTSCCGGGGSCTTC--THHHHHHHC-CCCCHHHHHHHHHHTTSCT
T ss_pred CCChHHHHHHcCCHHHHHHHHH----cCCCCCCcCCCCCChhhhccccc--cHHHHHHhccCCccHHHHHHHHHHHHhch
Confidence 6666666666666666666666 56666666666666666666333 35555554422 24455666666
Q ss_pred ceeeeee
Q 015738 385 SVRHVFN 391 (401)
Q Consensus 385 t~l~~a~ 391 (401)
||+|++.
T Consensus 240 t~l~~~~ 246 (261)
T 2xai_A 240 QQHHKIT 246 (261)
T ss_dssp TCGGGGG
T ss_pred hccccCc
Confidence 6666653
No 16
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=3.9e-43 Score=307.62 Aligned_cols=265 Identities=22% Similarity=0.159 Sum_probs=194.6
Q ss_pred hhhcccCCCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHH
Q 015738 65 LLLQVNAKGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILT 144 (401)
Q Consensus 65 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 144 (401)
+.+..|..|.||||+||..|+.++|++|+++|+++ +..+..|.||||+|+..|+.+++++|+
T Consensus 12 ~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~------------------~~~d~~g~t~L~~A~~~g~~~~v~~Ll 73 (364)
T 3ljn_A 12 NRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSP------------------TIQNRFGCTALHLACKFGCVDTAKYLA 73 (364)
T ss_dssp ----CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCT------------------TCCCTTCCCHHHHHHHHCCHHHHHHHH
T ss_pred CccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc------------------cccCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 34455666777777777777777777777776663 455666777777777777777777777
Q ss_pred hcCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhc----CCCCcc-----------------C
Q 015738 145 REDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLEN----STSVSH-----------------E 203 (401)
Q Consensus 145 ~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~----~~~~~~-----------------~ 203 (401)
++++.. .+..|.||||+|+. .++.+++++|++. |.+++. .
T Consensus 74 ~~g~~~---~~~~g~t~L~~A~~----------------~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (364)
T 3ljn_A 74 SVGEVH---SLWHGQKPIHLAVM----------------ANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVK 134 (364)
T ss_dssp HHCCCC---CCBTTBCHHHHHHH----------------TTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEE
T ss_pred HCCCCc---cccCCCCHHHHHHH----------------cCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccC
Confidence 777642 23456777777776 3366777777776 555544 6
Q ss_pred CCCCCcHHhHHHhhccc--ccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCcc-----ccccccCC
Q 015738 204 GPNGKTALHAAAMRSFA--VDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQS-----ASNIADKD 276 (401)
Q Consensus 204 ~~~~~t~l~~a~~~~~~--~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~-----~~~~~~~~ 276 (401)
+..|.||||+|+.. + +.++++.|+..+ .+++..+..|.||||+|+..|+.+++++|++.|++ . +..+.
T Consensus 135 ~~~g~t~L~~A~~~--g~~~~~~v~~Ll~~g-a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~~~~~- 209 (364)
T 3ljn_A 135 HCKGQTALHWCVGL--GPEYLEMIKILVQLG-ASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRL-DYANK- 209 (364)
T ss_dssp EESCCCHHHHHHHS--CGGGHHHHHHHHHHT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCT-TCCCT-
T ss_pred CCCCCCHHHHHHHc--CCchHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccc-cccCC-
Confidence 77788899998888 6 778888888774 44778888888999999988999999999888877 3 33333
Q ss_pred CCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCcccccccc------------
Q 015738 277 RKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDE------------ 344 (401)
Q Consensus 277 ~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~------------ 344 (401)
.|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++ .|++++.
T Consensus 210 ~g~t~L~~A~~~g~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~----~~~~~~~~~~~~~~~~~~~ 284 (364)
T 3ljn_A 210 QGNSHLHWAILINWEDVAMRFVEMGID-VNMEDNEHTVPLYLSVRAAMVLLTKELLQ----KTDVFLIQACPYHNGTTVL 284 (364)
T ss_dssp TCCCTTHHHHTTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTCCHHHHHHHHH----HSCHHHHHTCTTBSSSSBC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHhChHHHHHHHHH----cCCchhhhcCcccCccccc
Confidence 788899999988899999999888887 67888888999999999899999999888 4444322
Q ss_pred CCCCCCcHHHHHHHhCChhHHHHHHhhcCCChh
Q 015738 345 GDAEGNTPLHVLAAVRPKEFHDVMNRSTQANYD 377 (401)
Q Consensus 345 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~ 377 (401)
.+..|.||++.|+..+..+.+..||.. +++..
T Consensus 285 ~~~~~~~~l~~aa~~~~~~~v~~ll~~-~~~~~ 316 (364)
T 3ljn_A 285 PDRVVWLDFVPAAADPSKQEVLQLLQE-KLDEV 316 (364)
T ss_dssp GGGCCCCTTSCSSCCHHHHHHHHHHHH-HHHHH
T ss_pred ccccccccchhhhhccCHHHHHHHHHH-HHHHH
Confidence 456778888888888887777777766 44443
No 17
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=2.3e-41 Score=282.00 Aligned_cols=208 Identities=20% Similarity=0.205 Sum_probs=169.1
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCcc
Q 015738 123 EKNTALHEAVSQGNVDVVKILTREDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSH 202 (401)
Q Consensus 123 ~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~ 202 (401)
+|.||||+|+..|+.+++++|+++|.++ ...+..|.||||+|+. .++.+++++|++.|++++
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~----------------~g~~~~v~~Ll~~g~~~~- 63 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAV-NIITADHVSPLHEACL----------------GGHLSCVKILLKHGAQVN- 63 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHH----------------HTCHHHHHHHHHTTCCTT-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHH----------------cCCHHHHHHHHHCCCCCC-
Confidence 3667777777777777777777666653 3555566666666665 225666666666655544
Q ss_pred CCCCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHH
Q 015738 203 EGPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTAL 282 (401)
Q Consensus 203 ~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L 282 (401)
..+..|.||||+|+..|+.+++++|++.|++.. ....|.|||
T Consensus 64 -----------------------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~g~t~L 105 (261)
T 2xai_A 64 -----------------------------------GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ---PESDLASPI 105 (261)
T ss_dssp -----------------------------------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS---CSCTTCCHH
T ss_pred -----------------------------------CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC---CCCCCCCHH
Confidence 445567788888888889999999999998873 223688999
Q ss_pred HHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCCh
Q 015738 283 HLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPK 362 (401)
Q Consensus 283 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~ 362 (401)
|.|+..|+.+++++|++.+.+ ++.++..|.||||+|+..++.+++++|++ .|++++. +..|.||||+|+..++.
T Consensus 106 ~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~-~~~g~t~Lh~A~~~~~~ 179 (261)
T 2xai_A 106 HEAARRGHVECVNSLIAYGGN-IDHKISHLGTPLYLACENQQRACVKKLLE----SGADVNQ-GKGQDSPLHAVARTASE 179 (261)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC-TTCCBTTTBCHHHHHHHTTCHHHHHHHHH----HTCCTTC-CBTTBCHHHHHHHHTCH
T ss_pred HHHHHcCcHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHhCCHHHHHHHHH----cCCCCCC-CCCCCChHHHHHHcCCH
Confidence 999999999999999999988 68899999999999999999999999999 8899995 88999999999999999
Q ss_pred hHHHHHHhhcCCChhhhhccCcceeeeeecc
Q 015738 363 EFHDVMNRSTQANYDAVNKQNVSVRHVFNYG 393 (401)
Q Consensus 363 ~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~ 393 (401)
+++++|++. |+|++.+|..|+||+++|...
T Consensus 180 ~~v~~Ll~~-gad~~~~d~~g~tpl~~A~~~ 209 (261)
T 2xai_A 180 ELACLLMDF-GADTQAKNAEGKRPVELVPPE 209 (261)
T ss_dssp HHHHHHHHT-TCCTTCCCTTSCCGGGGSCTT
T ss_pred HHHHHHHHc-CCCCCCcCCCCCChhhhcccc
Confidence 999999976 999999999999999999643
No 18
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=6.8e-41 Score=277.90 Aligned_cols=230 Identities=23% Similarity=0.256 Sum_probs=176.5
Q ss_pred hhhcccCCCCcHHHHHHHcC-------------CHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHH
Q 015738 65 LLLQVNAKGDTPLHLAAKFG-------------HFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEA 131 (401)
Q Consensus 65 ~~~~~~~~g~t~L~~A~~~~-------------~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A 131 (401)
+++.+|..|.||||+|+..| +.+++++|+++|++. ....+..|.||||+|
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~-----------------~~~~d~~g~t~L~~A 64 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASL-----------------HNQTDRTGETALHLA 64 (253)
T ss_dssp -------------------------------------------------------------------CCCTTSCCHHHHH
T ss_pred CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCc-----------------ccccCCCCCcHHHHH
Confidence 45667777788888887766 899999999999986 344578999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCC-CCccCCCCCCcH
Q 015738 132 VSQGNVDVVKILTREDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENST-SVSHEGPNGKTA 210 (401)
Q Consensus 132 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~-~~~~~~~~~~t~ 210 (401)
+..|+.+++++|+++|+++ ...+..|.||||+|+. .++.+++++|++.+. +++..+..|.||
T Consensus 65 ~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~----------------~~~~~~v~~Ll~~~~~~~~~~~~~g~t~ 127 (253)
T 1yyh_A 65 ARYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVS----------------ADAQGVFQILIRNRATDLDARMHDGTTP 127 (253)
T ss_dssp HHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH----------------HTCHHHHHHHHHSTTSCTTCCCTTCCCH
T ss_pred HHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHH----------------cCCHHHHHHHHHcCCCCccccCCCCCcH
Confidence 9999999999999999885 4778899999999998 338999999999997 899999999999
Q ss_pred HhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCC
Q 015738 211 LHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGD 290 (401)
Q Consensus 211 l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~ 290 (401)
||+|+.. ++.+.++.|+..+. +++..+..|.||||+|+..|+.+++++|++.|+++ +..+. .|.||||+|+..|+
T Consensus 128 L~~A~~~--~~~~~v~~Ll~~g~-~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~-~g~tpL~~A~~~~~ 202 (253)
T 1yyh_A 128 LILAARL--AVEGMLEDLINSHA-DVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANK-DMQNN-REETPLFLAAREGS 202 (253)
T ss_dssp HHHHHHH--TCSSHHHHHHHTTC-CTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHHTC
T ss_pred HHHHHHc--ChHHHHHHHHHcCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC-CCCCHHHHHHHCCC
Confidence 9999999 88999999998654 48889999999999999999999999999999987 44444 79999999999999
Q ss_pred HHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhc
Q 015738 291 ARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLEN 334 (401)
Q Consensus 291 ~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 334 (401)
.+++++|+++|++ ++.+|..|+||+++|++.|+.+++++|...
T Consensus 203 ~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~ 245 (253)
T 1yyh_A 203 YETAKVLLDHFAN-RDITDHMDRLPRDIAQERMHHDIVRLLDLE 245 (253)
T ss_dssp HHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHC-
T ss_pred HHHHHHHHHcCCC-ccccccCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999998 688999999999999999999999999983
No 19
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=3e-42 Score=301.98 Aligned_cols=275 Identities=16% Similarity=0.128 Sum_probs=232.6
Q ss_pred HHHHHHHhhcCCCeeEEeecchhhhhchHHHHHHHHhhCChhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhhhhhccCC
Q 015738 24 VIERLLTAKAKNTILHINIISSERENVSTKFVEEILEKCPALLLQVNAKGDTPLHLAAKFGHFEIVRVLIERAKLAQRGD 103 (401)
Q Consensus 24 ~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~ 103 (401)
+++....|..|.||||+| +..|+.+++++|++ .|++++..|..|.||||+||..|+.++|++|+++|++.
T Consensus 10 ~~~~~~~d~~g~t~L~~A--a~~g~~~~v~~Ll~----~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---- 79 (364)
T 3ljn_A 10 KLNRIKSDDENMEKIHVA--ARKGQTDEVRRLIE----TGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVH---- 79 (364)
T ss_dssp ------CCHHHHHHHHHH--HHHTCHHHHHHHHH----TTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC----
T ss_pred CCCccccCCCCCCHHHHH--HHcCCHHHHHHHHH----cCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc----
Confidence 344556677799999999 99999999999998 78999999999999999999999999999999999853
Q ss_pred CCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhc----CCCCCC----------------CCCCCCCCHHH
Q 015738 104 EEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTRE----DPGYPY----------------SANNYGKTPLY 163 (401)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~----~~~~~~----------------~~~~~~~t~l~ 163 (401)
.+..|.||||+|+..|+.+++++|+++ +..... ..+..|.||||
T Consensus 80 ----------------~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~ 143 (364)
T 3ljn_A 80 ----------------SLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALH 143 (364)
T ss_dssp ----------------CCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHH
T ss_pred ----------------cccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHH
Confidence 234799999999999999999999998 555321 16778999999
Q ss_pred HHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccchHHHHHHhhccc----cccc
Q 015738 164 MAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNL----IKET 239 (401)
Q Consensus 164 ~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~----~~~~ 239 (401)
+|+.. +..+.+++++|++.|++++..+..|.||||+|+.. ++.+.++.|+..+... ++..
T Consensus 144 ~A~~~--------------g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~~~ 207 (364)
T 3ljn_A 144 WCVGL--------------GPEYLEMIKILVQLGASPTAKDKADETPLMRAMEF--RNREALDLMMDTVPSKSSLRLDYA 207 (364)
T ss_dssp HHHHS--------------CGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHT--TCHHHHHHHHHHCSCSSSCCTTCC
T ss_pred HHHHc--------------CCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc--CCHHHHHHHHhccccccccccccc
Confidence 99982 11278999999999999999999999999999999 8899999999876542 7788
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCC-----------cccc
Q 015738 240 DQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKC-----------YELV 308 (401)
Q Consensus 240 ~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~-----------~~~~ 308 (401)
+..|.||||+|+..|+.+++++|+++|+++ +..+. .|.||||+|+..|+.+++++|++++++. ....
T Consensus 208 ~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~-~~~d~-~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 285 (364)
T 3ljn_A 208 NKQGNSHLHWAILINWEDVAMRFVEMGIDV-NMEDN-EHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLP 285 (364)
T ss_dssp CTTCCCTTHHHHTTTCHHHHHHHHTTTCCT-TCCCT-TSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCG
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCCCC-CCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccc
Confidence 999999999999999999999999999997 44444 8999999999999999999999987542 1225
Q ss_pred CCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCC
Q 015738 309 DNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGD 346 (401)
Q Consensus 309 ~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 346 (401)
+..+++|+++|+..++.+.+..|+. .+++...+.
T Consensus 286 ~~~~~~~l~~aa~~~~~~~v~~ll~----~~~~~~~~~ 319 (364)
T 3ljn_A 286 DRVVWLDFVPAAADPSKQEVLQLLQ----EKLDEVVRS 319 (364)
T ss_dssp GGCCCCTTSCSSCCHHHHHHHHHHH----HHHHHHHTC
T ss_pred cccccccchhhhhccCHHHHHHHHH----HHHHHHhhc
Confidence 6788999999999998888888888 555544443
No 20
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=8.8e-41 Score=282.59 Aligned_cols=230 Identities=20% Similarity=0.171 Sum_probs=164.9
Q ss_pred hHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCC--CCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHH
Q 015738 117 IRMVNNEKNTALHEAVSQGNVDVVKILTREDPGY--PYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALL 194 (401)
Q Consensus 117 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~--~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll 194 (401)
++..|..|.||||+|+..|+.+++++|+++++.. ....+..|.||||+|+. .++.+++++|+
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~----------------~g~~~~v~~Ll 65 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAI----------------LGEASTVEKLY 65 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHH----------------HTCHHHHHHHH
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHH----------------cCCHHHHHHHH
Confidence 3567889999999999999999999999988763 45678889999999998 33889999999
Q ss_pred hcCCCCccCCCCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCcccccccc
Q 015738 195 ENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIAD 274 (401)
Q Consensus 195 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 274 (401)
++|++++..+..|.||||+|+.. ++.+.++.|+..+....... ..+. +.... . ..
T Consensus 66 ~~ga~~~~~~~~g~tpL~~A~~~--~~~~~v~~Ll~~~~~~~~~~---~~~~----------------~~~~~---~-~~ 120 (282)
T 1oy3_D 66 AAGAGVLVAERGGHTALHLACRV--RAHTCACVLLQPRPSHPRDA---SDTY----------------LTQSQ---D-CT 120 (282)
T ss_dssp HTTCCSSCCCTTSCCHHHHHTTT--TCHHHHHHHSSSCCSSCCCC-----------------------------------
T ss_pred HcCCCCCCCCCCCCCHHHHHHHc--CCcchhHhhhccCCCCchhh---HHHH----------------hhccc---c-cC
Confidence 99999988888888888888877 77777777776654321100 0000 00000 0 11
Q ss_pred CCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCC-CCcHH
Q 015738 275 KDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAE-GNTPL 353 (401)
Q Consensus 275 ~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~-g~t~L 353 (401)
...+.++++.++..+....+..++......++.++..|.||||+|+..|+.+++++|++ .|++++.++.. |.|||
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~----~g~~~~~~~~~~g~tpL 196 (282)
T 1oy3_D 121 PDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRD----AGADLNKPEPTCGRTPL 196 (282)
T ss_dssp -----------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHH----HTCCTTCCCTTTCCCHH
T ss_pred cchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHH----cCCCCCCCCCCCCcCHH
Confidence 12455777777766655444444443333478899999999999999999999999999 89999999865 99999
Q ss_pred HHHHHhCChhHHHHHHhhcCCChhhhhccCcceeeeeec
Q 015738 354 HVLAAVRPKEFHDVMNRSTQANYDAVNKQNVSVRHVFNY 392 (401)
Q Consensus 354 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 392 (401)
|+|+..|+.+++++|++. |++++.+|..|.||||+|..
T Consensus 197 ~~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~tpL~~A~~ 234 (282)
T 1oy3_D 197 HLAVEAQAASVLELLLKA-GADPTARMYGGRTPLGSALL 234 (282)
T ss_dssp HHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHc-CCCCcccccCCCCHHHHHHH
Confidence 999999999999999977 99999999999999999943
No 21
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=3.5e-40 Score=272.24 Aligned_cols=230 Identities=23% Similarity=0.205 Sum_probs=199.9
Q ss_pred hHhccCCCChHHHHHHHcCCHHHHHHHHh----cCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHH
Q 015738 117 IRMVNNEKNTALHEAVSQGNVDVVKILTR----EDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLA 192 (401)
Q Consensus 117 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~----~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~ 192 (401)
++..|.+|.||||+|+..|+.+++++|++ .+.+ ....+..|.||||+|+. .++.+++++
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~~~~g~t~L~~A~~----------------~~~~~~v~~ 64 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRE-LDIYNNLRQTPLHLAVI----------------TTLPSVVRL 64 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHH----------------TTCHHHHHH
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCC-CCcccccCCCHHHHHHH----------------cCCHHHHHH
Confidence 45678999999999999999999999997 4555 55778899999999998 348999999
Q ss_pred HHhcCCCCccCCCCCCcHHhHHHhhcccccchHHHHHHhhcc---cccccccCCCcHHHHHHHcCCHHHHHHHHhcCccc
Q 015738 193 LLENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLLEKKKN---LIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSA 269 (401)
Q Consensus 193 Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~---~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~ 269 (401)
|++.|++++..+..|.||||+|+.. ++.+.++.++..+.. .++..+..|.||||+|+..|+.+++++|++.|++.
T Consensus 65 Ll~~g~~~~~~~~~g~t~l~~A~~~--~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~ 142 (241)
T 1k1a_A 65 LVTAGASPMALDRHGQTAAHLACEH--RSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADI 142 (241)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHT--TCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHcCCCccccCCCCCCHHHHHHHc--CCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 9999999999999999999999998 889999999988752 57778889999999999999999999999999887
Q ss_pred cccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCC
Q 015738 270 SNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEG 349 (401)
Q Consensus 270 ~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g 349 (401)
. ..+...|.||||.|+..|+.+++++|++.|.+ ++.+|..|+||||+|+..++.+++++|++ .|++++.+|..|
T Consensus 143 ~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g 216 (241)
T 1k1a_A 143 D-AVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN-VNAQMYSGSSALHSASGRGLLPLVRTLVR----SGADSSLKNCHN 216 (241)
T ss_dssp T-CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHH----TTCCTTCCCTTS
T ss_pred c-cccccCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHh----cCCCCCCcCCCC
Confidence 4 33424788999999999999999999999888 68899999999999999999999999999 899999999999
Q ss_pred CcHHHHHHHhCChhHHHHHHhh
Q 015738 350 NTPLHVLAAVRPKEFHDVMNRS 371 (401)
Q Consensus 350 ~t~L~~A~~~~~~~~~~~Ll~~ 371 (401)
.||||+|+..++.++++.|+..
T Consensus 217 ~tpl~~A~~~~~~~i~~~l~~~ 238 (241)
T 1k1a_A 217 DTPLMVARSRRVIDILRGKATR 238 (241)
T ss_dssp CCTTTTCSSHHHHHHHTC----
T ss_pred CCHHHHHHhcCcHHHHhhhccC
Confidence 9999999999999999988755
No 22
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.2e-39 Score=268.29 Aligned_cols=228 Identities=26% Similarity=0.332 Sum_probs=205.4
Q ss_pred hHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhc
Q 015738 117 IRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLEN 196 (401)
Q Consensus 117 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~ 196 (401)
++..+..|.||||+|+..|+.+++++|+++|.++ ...+..|.||||+|+. .++.+++++|++.
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~----------------~~~~~~v~~Ll~~ 66 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANI-DTCSEDQRTPLMEAAE----------------NNHLEAVKYLIKA 66 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH----------------TTCHHHHHHHHTT
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCc-CccCCCCCCHHHHHHH----------------hCCHHHHHHHHhC
Confidence 3567889999999999999999999999999885 4678889999999998 3489999999999
Q ss_pred CCCCccCCCCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCC
Q 015738 197 STSVSHEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKD 276 (401)
Q Consensus 197 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 276 (401)
|++++..+..|.||||+|+.. ++.+.+++|+..+...++..+..|.||||+|+..|+.+++++|++.|+++ +..+.
T Consensus 67 g~~~~~~~~~g~t~L~~A~~~--~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~- 142 (237)
T 3b7b_A 67 GALVDPKDAEGSTCLHLAAKK--GHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDI-NIRDN- 142 (237)
T ss_dssp TCCCCCCCTTSCCHHHHHHHT--TCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-
T ss_pred CCCCCCCCCCCCcHHHHHHHc--CCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CccCC-
Confidence 999999999999999999998 88999999999887778888999999999999999999999999999887 33333
Q ss_pred CCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHH
Q 015738 277 RKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVL 356 (401)
Q Consensus 277 ~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A 356 (401)
.|.||||.|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..++.+++++|++ .|++++.+|..|.||||+|
T Consensus 143 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~gad~~~~d~~g~t~l~~A 217 (237)
T 3b7b_A 143 EENICLHWAAFSGCVDIAEILLAAKCD-LHAVNIHGDSPLHIAARENRYDCVVLFLS----RDSDVTLKNKEGETPLQCA 217 (237)
T ss_dssp TSCCHHHHHHHHCCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHT----TTCCTTCCCTTSCCHHHHS
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhCCHhHHHHHHH----cCCCCCccCCCCCCHHHHH
Confidence 788999999999999999999999988 68889999999999999999999999999 8999999999999999999
Q ss_pred HHhCChhHHHHHHh
Q 015738 357 AAVRPKEFHDVMNR 370 (401)
Q Consensus 357 ~~~~~~~~~~~Ll~ 370 (401)
+..++.+.+..|++
T Consensus 218 ~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 218 SLNSQVWSALQMSK 231 (237)
T ss_dssp CTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99998876666654
No 23
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=5.1e-39 Score=264.42 Aligned_cols=228 Identities=22% Similarity=0.267 Sum_probs=201.7
Q ss_pred hhhcccCCCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHH
Q 015738 65 LLLQVNAKGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILT 144 (401)
Q Consensus 65 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 144 (401)
+++..+..|.||||+||..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|+
T Consensus 3 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll 64 (237)
T 3b7b_A 3 NFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANI------------------DTCSEDQRTPLMEAAENNHLEAVKYLI 64 (237)
T ss_dssp CCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCT------------------TCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred CcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCc------------------CccCCCCCCHHHHHHHhCCHHHHHHHH
Confidence 45678889999999999999999999999998874 566778999999999999999999999
Q ss_pred hcCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcC-CCCccCCCCCCcHHhHHHhhcccccc
Q 015738 145 REDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENS-TSVSHEGPNGKTALHAAAMRSFAVDT 223 (401)
Q Consensus 145 ~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~-~~~~~~~~~~~t~l~~a~~~~~~~~~ 223 (401)
++|.++ ...+..|.||||+|+. .++.+++++|++.| .+++..+..|.||||+|+.. ++.+
T Consensus 65 ~~g~~~-~~~~~~g~t~L~~A~~----------------~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~--~~~~ 125 (237)
T 3b7b_A 65 KAGALV-DPKDAEGSTCLHLAAK----------------KGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEY--KHVD 125 (237)
T ss_dssp TTTCCC-CCCCTTSCCHHHHHHH----------------TTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHT--TCHH
T ss_pred hCCCCC-CCCCCCCCcHHHHHHH----------------cCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHc--CCHH
Confidence 998874 4678889999999998 34899999999998 88899999999999999988 8888
Q ss_pred hHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCC
Q 015738 224 ALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPK 303 (401)
Q Consensus 224 ~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~ 303 (401)
.++.|++.+.. ++..+..|.||||+|+..|+.+++++|++.|+++ +..+. .|.||||+|+..++.+++++|+++|++
T Consensus 126 ~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~gad 202 (237)
T 3b7b_A 126 LVKLLLSKGSD-INIRDNEENICLHWAAFSGCVDIAEILLAAKCDL-HAVNI-HGDSPLHIAARENRYDCVVLFLSRDSD 202 (237)
T ss_dssp HHHHHHHTTCC-TTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCT-TCCCT-TCCCHHHHHHHTTCHHHHHHHHTTTCC
T ss_pred HHHHHHHCCCC-CCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCC-CCCCHHHHHHHhCCHhHHHHHHHcCCC
Confidence 89888886554 7888899999999999999999999999999887 33333 789999999999999999999999988
Q ss_pred CccccCCCCCcHHHHHHHhCChhHHHHHHh
Q 015738 304 CYELVDNRGCNFLHYAMVSFHVGQLRNLLE 333 (401)
Q Consensus 304 ~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 333 (401)
++.+|..|+||||+|+..++...+..|++
T Consensus 203 -~~~~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 203 -VTLKNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp -TTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred -CCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 68899999999999999999877777766
No 24
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=5e-39 Score=263.39 Aligned_cols=227 Identities=24% Similarity=0.281 Sum_probs=206.8
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCc
Q 015738 122 NEKNTALHEAVSQGNVDVVKILTREDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVS 201 (401)
Q Consensus 122 ~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~ 201 (401)
..+.+|||.|+..|+.+++++|++.++......+..|.||||+|+. .++.+++++|++.|++++
T Consensus 4 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~----------------~g~~~~v~~Ll~~g~~~~ 67 (231)
T 3aji_A 4 CVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACS----------------AGHTEIVEFLLQLGVPVN 67 (231)
T ss_dssp CCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHH----------------HTCHHHHHHHHHTTCCSC
T ss_pred ccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHH----------------cCcHHHHHHHHHhCCCCC
Confidence 4578999999999999999999999887777788999999999998 338999999999999999
Q ss_pred cCCCCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchH
Q 015738 202 HEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTA 281 (401)
Q Consensus 202 ~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~ 281 (401)
..+..|.||||+|+.. ++.+.+++|+..+.. ++..+..|.||||+|+..|+.+++++|++.|.++ ...+. .|.||
T Consensus 68 ~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~-~g~t~ 142 (231)
T 3aji_A 68 DKDDAGWSPLHIAASA--GXDEIVKALLVKGAH-VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANP-DAKDH-YDATA 142 (231)
T ss_dssp CCCTTSCCHHHHHHHH--TCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TSCCH
T ss_pred CcCCCCCCHHHHHHHc--CHHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC-CCCcH
Confidence 9999999999999999 889999998887654 7888899999999999999999999999999887 33333 78999
Q ss_pred HHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCC
Q 015738 282 LHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRP 361 (401)
Q Consensus 282 L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~ 361 (401)
||.|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..++.+++++|++ .|++++.+|..|.||||+|+..++
T Consensus 143 L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~t~l~~A~~~~~ 217 (231)
T 3aji_A 143 MHRAAAKGNLKMVHILLFYKAS-TNIQDTEGNTPLHLACDEERVEEAKFLVT----QGASIYIENKEEKTPLQVAKGGLG 217 (231)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCSCCCCTTSCCHHHHSCHHHH
T ss_pred HHHHHHcCCHHHHHHHHhcCCC-ccccCCCCCCHHHHHHHCCCHHHHHHHHH----CCCCCCCCCCCCCCHHHHHHhhHH
Confidence 9999999999999999999988 68899999999999999999999999999 899999999999999999999999
Q ss_pred hhHHHHHHhhcCCC
Q 015738 362 KEFHDVMNRSTQAN 375 (401)
Q Consensus 362 ~~~~~~Ll~~~~~~ 375 (401)
.+++++|++. |++
T Consensus 218 ~~i~~lL~~~-~a~ 230 (231)
T 3aji_A 218 LILKRLAEGE-EAS 230 (231)
T ss_dssp HHHHHHHHHH-HHC
T ss_pred HHHHHHHccc-ccc
Confidence 9999888865 654
No 25
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=6.9e-40 Score=270.44 Aligned_cols=192 Identities=26% Similarity=0.287 Sum_probs=116.8
Q ss_pred hccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCC
Q 015738 119 MVNNEKNTALHEAVSQGNVDVVKILTREDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENST 198 (401)
Q Consensus 119 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~ 198 (401)
..+..|.||||+|+..|+.+++++|+++|+++ ...+..|.||||+|+. .++.+++++|++.+.
T Consensus 41 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~----------------~~~~~~~~~Ll~~~~ 103 (241)
T 1k1a_A 41 IYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQTAAHLACE----------------HRSPTCLRALLDSAA 103 (241)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH----------------TTCHHHHHHHHHHSC
T ss_pred cccccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHH----------------cCCHHHHHHHHHcCC
Confidence 33444555555555555555555555554442 2334445555555554 224455555555444
Q ss_pred ----CCccCCCCCCcHHhHHHhhcccccchHHHHHHhhcccccccc-cCCCcHHHHHHHcCCHHHHHHHHhcCccccccc
Q 015738 199 ----SVSHEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETD-QYGWTPIHYAAYYGNYRTVNLLLETDQSASNIA 273 (401)
Q Consensus 199 ----~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~-~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~ 273 (401)
+++..+..|.||||+|+.. ++.+.++.|+..+.. ++..+ ..|.||||+|+..|+.+++++|++.|+++ +..
T Consensus 104 ~~~~~~~~~~~~g~t~L~~A~~~--~~~~~~~~Ll~~g~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~ 179 (241)
T 1k1a_A 104 PGTLDLEARNYDGLTALHVAVNT--ECQETVQLLLERGAD-IDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANV-NAQ 179 (241)
T ss_dssp TTSCCTTCCCTTSCCHHHHHHHH--TCHHHHHHHHHTTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCB
T ss_pred CccccccccCcCCCcHHHHHHHc--CCHHHHHHHHHcCCC-cccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCc
Confidence 4444555555555555555 555555555554433 33344 56777888888888888888888887776 333
Q ss_pred cCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHh
Q 015738 274 DKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLE 333 (401)
Q Consensus 274 ~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 333 (401)
+. .|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..++.++++.|++
T Consensus 180 ~~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~i~~~l~~ 237 (241)
T 1k1a_A 180 MY-SGSSALHSASGRGLLPLVRTLVRSGAD-SSLKNCHNDTPLMVARSRRVIDILRGKAT 237 (241)
T ss_dssp CT-TSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCTTTTCSSHHHHHHHTC---
T ss_pred CC-CCCCHHHHHHHcCCHHHHHHHHhcCCC-CCCcCCCCCCHHHHHHhcCcHHHHhhhcc
Confidence 33 677888888888888888888888777 57778888888888888888888887776
No 26
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=2.1e-38 Score=259.70 Aligned_cols=224 Identities=25% Similarity=0.258 Sum_probs=204.1
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCC
Q 015738 70 NAKGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPG 149 (401)
Q Consensus 70 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~ 149 (401)
+..+.+|||.|+..|+.+++++|++.+... ++..+..|.||||+|+..|+.+++++|+++|.+
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~-----------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 65 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADKSL-----------------ATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP 65 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCGGG-----------------GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhchhh-----------------hhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCC
Confidence 346789999999999999999999987764 567788999999999999999999999999988
Q ss_pred CCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccchHHHHH
Q 015738 150 YPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLL 229 (401)
Q Consensus 150 ~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll 229 (401)
+ ...+..|.||||+|+. .++.+++++|++.|++++..+..|.||||+|+.. ++.+.+++|+
T Consensus 66 ~-~~~~~~g~t~L~~A~~----------------~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~--~~~~~~~~Ll 126 (231)
T 3aji_A 66 V-NDKDDAGWSPLHIAAS----------------AGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASK--NRHEIAVMLL 126 (231)
T ss_dssp S-CCCCTTSCCHHHHHHH----------------HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT--TCHHHHHHHH
T ss_pred C-CCcCCCCCCHHHHHHH----------------cCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc--CCHHHHHHHH
Confidence 4 4778899999999998 3389999999999999999999999999999998 8889999998
Q ss_pred HhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccC
Q 015738 230 EKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVD 309 (401)
Q Consensus 230 ~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 309 (401)
+.+.. ++..+..|.||||+|+..|+.+++++|++.|+++ +..+. .|.||||+|+..++.+++++|+++|++ ++.+|
T Consensus 127 ~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~ 202 (231)
T 3aji_A 127 EGGAN-PDAKDHYDATAMHRAAAKGNLKMVHILLFYKAST-NIQDT-EGNTPLHLACDEERVEEAKFLVTQGAS-IYIEN 202 (231)
T ss_dssp HTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCC
T ss_pred HcCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc-cccCC-CCCCHHHHHHHCCCHHHHHHHHHCCCC-CCCCC
Confidence 87654 7888999999999999999999999999999887 44444 799999999999999999999999988 68899
Q ss_pred CCCCcHHHHHHHhCChhHHHHHHh
Q 015738 310 NRGCNFLHYAMVSFHVGQLRNLLE 333 (401)
Q Consensus 310 ~~g~t~l~~A~~~~~~~~~~~Ll~ 333 (401)
..|.||+|+|+..++.+++++|++
T Consensus 203 ~~g~t~l~~A~~~~~~~i~~lL~~ 226 (231)
T 3aji_A 203 KEEKTPLQVAKGGLGLILKRLAEG 226 (231)
T ss_dssp TTSCCHHHHSCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHhhHHHHHHHHHcc
Confidence 999999999999999999999998
No 27
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=270.66 Aligned_cols=218 Identities=20% Similarity=0.238 Sum_probs=169.3
Q ss_pred hccCCCChHHHHHHHcCCHHHHHHHHhcCCCC-------CCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHH
Q 015738 119 MVNNEKNTALHEAVSQGNVDVVKILTREDPGY-------PYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVL 191 (401)
Q Consensus 119 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~-------~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~ 191 (401)
.+|..+.+||+.|+..|+.++|++|++.++.. ....+..+.|||+.|+..+ ....+++
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~---------------~~~~~v~ 70 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCA---------------PAQKRLA 70 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC---------------------------------------------------
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhC---------------CHHHHHH
Confidence 45667889999999999999999999988753 2345667889999998632 1345788
Q ss_pred HHHhcCCCCccCCCCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccc
Q 015738 192 ALLENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASN 271 (401)
Q Consensus 192 ~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~ 271 (401)
.|++.|++++..+..|.||||+|+.. ++.++++.|+..+.. ++..+..|.||+++|+..++.+++++|++.|+++ +
T Consensus 71 ~Ll~~Gadvn~~d~~G~TpLh~A~~~--g~~~~v~~Ll~~~a~-~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-n 146 (269)
T 4b93_B 71 KVPASGLGVNVTSQDGSSPLHVAALH--GRADLIPLLLKHGAN-AGARNADQAVPLHLACQQGHFQVVKCLLDSNAKP-N 146 (269)
T ss_dssp ----CCCCTTCCCTTSCCHHHHHHHT--TCTTHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-C
T ss_pred HHHHCCCCCCCcCCCCCCHHHHHHHc--CcHHHHHHHHhcCCC-cCccCCCCCCccccccccChHHHHHHHHHCCCCC-C
Confidence 99999999999999999999999998 889999998877654 7888899999999999999999999999999887 4
Q ss_pred cccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCc
Q 015738 272 IADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNT 351 (401)
Q Consensus 272 ~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t 351 (401)
..+. .|.||||+|+..|+.+++++|+++|++ ++.++..|+||||+|+..|+.+++++|++ .|++++.+|..|+|
T Consensus 147 ~~d~-~g~TpL~~A~~~g~~~~v~~Ll~~gad-vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~----~Gad~~~~d~~G~T 220 (269)
T 4b93_B 147 KKDL-SGNTPLIYACSGGHHELVALLLQHGAS-INASNNKGNTALHEAVIEKHVFVVELLLL----HGASVQVLNKRQRT 220 (269)
T ss_dssp CCCT-TCCCHHHHHHHTTCGGGHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHH----TTCCSCCCCTTSCC
T ss_pred CCCC-CCCCHHHHHHHCCCHHHHHHHHHCCCC-CCccccCCCcHHHHHHHcCCHHHHHHHHH----CCCCCCCcCCCCCC
Confidence 4444 789999999999999999999999988 78899999999999999999999999999 89999999999999
Q ss_pred HHHHHHHhCC
Q 015738 352 PLHVLAAVRP 361 (401)
Q Consensus 352 ~L~~A~~~~~ 361 (401)
|||+|+++++
T Consensus 221 pL~~A~~~~~ 230 (269)
T 4b93_B 221 AVDCAEQNSK 230 (269)
T ss_dssp SGGGSCTTCH
T ss_pred HHHHHHhCCc
Confidence 9999987764
No 28
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=2.1e-39 Score=276.40 Aligned_cols=250 Identities=23% Similarity=0.236 Sum_probs=196.6
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCC
Q 015738 70 NAKGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPG 149 (401)
Q Consensus 70 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~ 149 (401)
+..|.||||.||..|+.++|++|+++|++ ++..+..|.||||+|+..|+.+++++|+++|++
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~------------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~ 98 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLERGAD------------------INYANVDGLTALHQACIDDNVDMVKFLVENGAN 98 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHHCCC------------------TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHcCCC------------------CcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 44678999999999999999999999988 467788999999999999999999999999988
Q ss_pred CCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccchHHHHH
Q 015738 150 YPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLL 229 (401)
Q Consensus 150 ~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll 229 (401)
+ ...+..|.||||+|+. .++.+++++|++.|++++..+..|.||||+|+.. +..+.+..++
T Consensus 99 ~-~~~~~~g~tpL~~A~~----------------~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~--~~~~~~~~ll 159 (299)
T 1s70_B 99 I-NQPDNEGWIPLHAAAS----------------CGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEE--AMEELLQNEV 159 (299)
T ss_dssp T-TCCCTTSCCHHHHHHH----------------HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSH--HHHHHHHHHH
T ss_pred C-CCCCCCCCcHHHHHHH----------------cCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhc--chHHHHHHHH
Confidence 5 4778899999999998 3389999999999999999999999999999988 8888888888
Q ss_pred HhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccC
Q 015738 230 EKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVD 309 (401)
Q Consensus 230 ~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 309 (401)
...+..++..+..+.++++ ..++.++..+..... .....|.||||.|+..|+.+++++|++.|.+ ++.+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d-~~~~d 229 (299)
T 1s70_B 160 NRQGVDIEAARKEEERIML--------RDARQWLNSGHINDV-RHAKSGGTALHVAAAKGYTEVLKLLIQARYD-VNIKD 229 (299)
T ss_dssp HHHTCCHHHHHHHHHHHHH--------HHHHHHHHHTCCCCC-CCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCC
T ss_pred hhcCCCchhhhhhhhhHHH--------HHHHHHHhccCcchh-hhcCCCCCHHHHHHHCCcHHHHHHHHHcCCC-CCCcC
Confidence 8776655544433333333 234445555544422 2333677888888888888888888887776 57778
Q ss_pred CCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHHhh
Q 015738 310 NRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRS 371 (401)
Q Consensus 310 ~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 371 (401)
..|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|++. ..+.++.+++.
T Consensus 230 ~~g~tpL~~A~~~~~~~~v~~Ll~----~gad~~~~d~~g~t~l~~A~~~-~~~~l~~l~~~ 286 (299)
T 1s70_B 230 YDGWTPLHAAAHWGKEEACRILVE----NLCDMEAVNKVGQTAFDVADED-ILGYLEELQKK 286 (299)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCTTTSCCSG-GGHHHHHHHHH
T ss_pred CCCCcHHHHHHhcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHH-HHHHHHHHHHH
Confidence 888888888888888888888888 6788888888888888888653 34555555544
No 29
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=3.8e-38 Score=257.69 Aligned_cols=215 Identities=23% Similarity=0.252 Sum_probs=160.4
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccC
Q 015738 124 KNTALHEAVSQGNVDVVKILTREDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHE 203 (401)
Q Consensus 124 g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~ 203 (401)
|.||||+|+..|+.+++++|++.++......+..|.||||+|+. .++.+++++|++.|++++..
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~----------------~~~~~~v~~Ll~~~~~~~~~ 65 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVS----------------FQAHEITSFLLSKMENVNLD 65 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHH----------------TTCHHHHHHHHHTCTTCCGG
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHH----------------cCCHHHHHHHHhcccccccc
Confidence 68999999999999999999999988776788889999999998 33888999999888443221
Q ss_pred CCCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHH
Q 015738 204 GPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALH 283 (401)
Q Consensus 204 ~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~ 283 (401)
. ..+..|.||||+|+..|+.+++++|++.|...........|.||||
T Consensus 66 ~---------------------------------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~ 112 (228)
T 2dzn_A 66 D---------------------------------YPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLH 112 (228)
T ss_dssp G---------------------------------CCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHH
T ss_pred c---------------------------------cCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHH
Confidence 0 1345567777777777777777777777632222222336777777
Q ss_pred HHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccc-cccccCCCCCCcHHHHHHHhCCh
Q 015738 284 LAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLAR-SLIDEGDAEGNTPLHVLAAVRPK 362 (401)
Q Consensus 284 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~-~~~~~~~~~g~t~L~~A~~~~~~ 362 (401)
.|+..++.+++++|+++|.+ ++.++..|.||||+|+..++.+++++|++ .| ++++.+|..|.||||+|+..++.
T Consensus 113 ~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~d~~g~t~L~~A~~~~~~ 187 (228)
T 2dzn_A 113 LAVGKKWFEVSQFLIENGAS-VRIKDKFNQIPLHRAASVGSLKLIELLCG----LGKSAVNWQDKQGWTPLFHALAEGHG 187 (228)
T ss_dssp HHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHT----TTCCCSCCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHcCCHhHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHh----cCcccccCcCCCCCCHHHHHHHcCCH
Confidence 77777777777777777766 56777777788888877777778877777 56 77777777788888888877777
Q ss_pred hHHHHHHhhcCCChhhhhccCcceeeeeec
Q 015738 363 EFHDVMNRSTQANYDAVNKQNVSVRHVFNY 392 (401)
Q Consensus 363 ~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 392 (401)
+++++|+++.|+|++.+|..|+||+++|.+
T Consensus 188 ~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 188 DAAVLLVEKYGAEYDLVDNKGAKAEDVALN 217 (228)
T ss_dssp HHHHHHHHHHCCCSCCBCTTSCBGGGGCSS
T ss_pred HHHHHHHHhcCCCCCccCCCCCcHHHHHHH
Confidence 777777755577877777788888877743
No 30
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=7e-38 Score=258.33 Aligned_cols=232 Identities=22% Similarity=0.279 Sum_probs=164.1
Q ss_pred hcccCCCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhc
Q 015738 67 LQVNAKGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTRE 146 (401)
Q Consensus 67 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 146 (401)
+..|..|.|||+.|+..|+.+++++|++.|+++ +..+..|.||||+|+..|+.+++++|+++
T Consensus 3 ~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 64 (240)
T 3eu9_A 3 THIDDYSTWDIVKATQYGIYERCRELVEAGYDV------------------RQPDKENVTLLHWAAINNRIDLVKYYISK 64 (240)
T ss_dssp CCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred cccccccchHHHHHHHcCChHHHHHHHHcCCCc------------------CCCCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 456788899999999999999999999998874 56677899999999999999999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccchHH
Q 015738 147 DPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDTALP 226 (401)
Q Consensus 147 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~ 226 (401)
++......+..|.|||++|+. .++.+++++|++.|++++..+..|
T Consensus 65 ~~~~~~~~~~~~~t~L~~A~~----------------~~~~~~v~~Ll~~g~~~~~~~~~g------------------- 109 (240)
T 3eu9_A 65 GAIVDQLGGDLNSTPLHWATR----------------QGHLSMVVQLMKYGADPSLIDGEG------------------- 109 (240)
T ss_dssp TCCTTCCBTTTTBCHHHHHHH----------------HTCHHHHHHHHHTTCCTTCCCTTS-------------------
T ss_pred CCcchhhcCCcCCChhHHHHH----------------cCCHHHHHHHHHcCCCCcccCCCC-------------------
Confidence 988776677778899999988 337888888888887776655444
Q ss_pred HHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCC-HHHHHHhhhcCCCCc
Q 015738 227 KLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGD-ARTVERIISGNPKCY 305 (401)
Q Consensus 227 ~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~-~~~~~~Ll~~~~~~~ 305 (401)
.||||+|+..|+.+++++|++.|+++ ...+. .|.||||.|+..++ .+++++|++.+.+ +
T Consensus 110 -----------------~t~l~~A~~~~~~~~~~~Ll~~~~~~-~~~~~-~g~t~l~~a~~~~~~~~~~~~L~~~~~~-~ 169 (240)
T 3eu9_A 110 -----------------CSCIHLAAQFGHTSIVAYLIAKGQDV-DMMDQ-NGMTPLMWAAYRTHSVDPTRLLLTFNVS-V 169 (240)
T ss_dssp -----------------CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHHCCSSTTHHHHHHTTCC-T
T ss_pred -----------------CCHHHHHHHcCHHHHHHHHHhcCCCc-cccCC-CCCcHHHHHHHhCChHHHHHHHHhcCCC-c
Confidence 45555555555556666666655554 22222 55566666664443 5666666666655 3
Q ss_pred cccCC-CCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHHhhcCCCh
Q 015738 306 ELVDN-RGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRSTQANY 376 (401)
Q Consensus 306 ~~~~~-~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~ 376 (401)
+.++. .|.||||+|+..++.+++++|++ .|++++.++..|.||||+|++.++.+++++|++. +++.
T Consensus 170 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~-~~~~ 236 (240)
T 3eu9_A 170 NLGDKYHKNTALHWAVLAGNTTVISLLLE----AGANVDAQNIKGESALDLAKQRKNVWMINHLQEA-RQAK 236 (240)
T ss_dssp TCCCTTTCCCHHHHHHHHTCHHHHHHHHH----HTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHH-C---
T ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHh-hhcc
Confidence 44444 66677777777777777777776 5666777777777777777777777777777655 4443
No 31
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=2.1e-39 Score=278.60 Aligned_cols=296 Identities=11% Similarity=0.043 Sum_probs=210.1
Q ss_pred CCCeeEEeecchhhhhchHHHHHHHHhhCChhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhh
Q 015738 34 KNTILHINIISSERENVSTKFVEEILEKCPALLLQVNAKGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPF 113 (401)
Q Consensus 34 g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 113 (401)
+.+|+|.. ..+++++|++ .|++++..+..|.|+++ |+.++|++|+++|+++..........-...
T Consensus 23 ~~~~~~~~------~~dlv~~ll~----~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~ 87 (327)
T 1sw6_A 23 TAGPIITF------THDLTSDFLS----SPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSS 87 (327)
T ss_dssp --CCEEEC------CTTCCCSTTT----SSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC---------------
T ss_pred cccchhhh------cCchHHHHhh----CCcccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccc
Confidence 56777765 4577888888 89999999999999988 999999999999988643211000000000
Q ss_pred HHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHH
Q 015738 114 RQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLAL 193 (401)
Q Consensus 114 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~L 193 (401)
. .-........+..|.|+..+..+++++|++.|.++....+..|.||||+|+. .++.+++++|
T Consensus 88 ~-~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~----------------~g~~~~v~~L 150 (327)
T 1sw6_A 88 N-RNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTS----------------IANLELVKHL 150 (327)
T ss_dssp -----------------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHH----------------TTCHHHHHHH
T ss_pred c-ccccccCCccchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHH----------------cCCHHHHHHH
Confidence 0 0000111223446888888889999999999998765489999999999998 3489999999
Q ss_pred HhcCCCCccCCCCCCcHHhHHHhhcccc---cchHHHHHHhhcccccccccCCCcHHHHHHH----cCCHHHHHHHHhcC
Q 015738 194 LENSTSVSHEGPNGKTALHAAAMRSFAV---DTALPKLLEKKKNLIKETDQYGWTPIHYAAY----YGNYRTVNLLLETD 266 (401)
Q Consensus 194 l~~~~~~~~~~~~~~t~l~~a~~~~~~~---~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~----~~~~~~~~~Ll~~~ 266 (401)
++.|++++..+..|.||||+|+.. ++ .+.+..+++.....++..+..|.||||+|+. .|+.+++++|++.+
T Consensus 151 l~~Gad~n~~d~~g~TpLh~A~~~--g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~ 228 (327)
T 1sw6_A 151 VKHGSNRLYGDNMGESCLVKAVKS--VNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDIL 228 (327)
T ss_dssp HHTTCCTTBCCTTCCCHHHHHHHS--SHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHH
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHh--cccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHH
Confidence 999999999999999999999987 66 6888888888877789999999999999999 89999999999876
Q ss_pred ccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCC
Q 015738 267 QSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGD 346 (401)
Q Consensus 267 ~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 346 (401)
........ +.. +...+.+.+.+ ++.++..|.||||+|+. +++|++ . +++.+|
T Consensus 229 ~~~~~~~~---~~~------------i~~~~~~~g~~-~~~~~~~g~t~L~~a~~------~~~Ll~----~--~~n~~d 280 (327)
T 1sw6_A 229 MGWIVKKQ---NRP------------IQSGTNEKESK-PNDKNGERKDSILENLD------LKWIIA----N--MLNAQD 280 (327)
T ss_dssp HHHHHHGG---GCC------------EEEC-----------------CHHHHHCS------HHHHHH----H--TTTCCC
T ss_pred HHHHhccc---chH------------HHhhhhcccCC-cccccccCCChhHHHHH------HHHHHH----h--CCCCCC
Confidence 44311100 000 00111233444 67788899999999885 788888 3 588899
Q ss_pred CCCCcHHHHHHHhCChhHHHHHHhhcCCChhhhhccCcceeeeeec
Q 015738 347 AEGNTPLHVLAAVRPKEFHDVMNRSTQANYDAVNKQNVSVRHVFNY 392 (401)
Q Consensus 347 ~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 392 (401)
..|+||||+|+..|+.+++++|++. |+|++.+|..|+||||+|.+
T Consensus 281 ~~G~TpLh~A~~~g~~~~v~~Ll~~-Gad~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 281 SNGDTCLNIAARLGNISIVDALLDY-GADPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp TTSCCHHHHHHHHCCHHHHHHHHHT-TCCTTCCCTTSCCGGGGTCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHh
Confidence 9999999999999999999999966 99999999999999999854
No 32
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=6.8e-39 Score=273.24 Aligned_cols=272 Identities=21% Similarity=0.163 Sum_probs=222.8
Q ss_pred HHHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCC
Q 015738 79 LAAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYPYSANNYG 158 (401)
Q Consensus 79 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 158 (401)
.++..++.+.++.++.............. ....+..|.||||.|+..|+.+++++|+++|+++ ...+..|
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~---------~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g 73 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRK---------KTKVKFDDGAVFLAACSSGDTEEVLRLLERGADI-NYANVDG 73 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCS---------CCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCT-TCBCTTC
T ss_pred hHHHHHHHHHHHHHHccccccccccccCc---------ccccccCCccHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCC
Confidence 46677788888888877655322211100 1223456789999999999999999999999884 4678899
Q ss_pred CCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccchHHHHHHhhcccccc
Q 015738 159 KTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKE 238 (401)
Q Consensus 159 ~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~ 238 (401)
.||||+|+. .++.+++++|++.|++++..+..|.||||+|+.. ++.+.+++|+..+.. ++.
T Consensus 74 ~t~L~~A~~----------------~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~--g~~~~v~~Ll~~g~~-~~~ 134 (299)
T 1s70_B 74 LTALHQACI----------------DDNVDMVKFLVENGANINQPDNEGWIPLHAAASC--GYLDIAEYLISQGAH-VGA 134 (299)
T ss_dssp CBHHHHHHH----------------TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH--TCHHHHHHHHHTTCC-TTC
T ss_pred CCHHHHHHH----------------cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc--CCHHHHHHHHhCCCC-CCC
Confidence 999999998 4489999999999999999999999999999999 889999999987554 788
Q ss_pred cccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHH
Q 015738 239 TDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHY 318 (401)
Q Consensus 239 ~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~ 318 (401)
.+..|.||||+|+..++.++++.++............ .+.++++ ..+..++..+.......+..|.||||+
T Consensus 135 ~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~-~~~~~~~--------~~~~~~l~~~~~~~~~~~~~g~t~L~~ 205 (299)
T 1s70_B 135 VNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARK-EEERIML--------RDARQWLNSGHINDVRHAKSGGTALHV 205 (299)
T ss_dssp CCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHH-HHHHHHH--------HHHHHHHHHTCCCCCCCTTTCCCHHHH
T ss_pred cCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhh-hhhhHHH--------HHHHHHHhccCcchhhhcCCCCCHHHH
Confidence 8999999999999999999999988753322122111 2223332 334556666666566678899999999
Q ss_pred HHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHHhhcCCChhhhhccCcceeeeeecc
Q 015738 319 AMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRSTQANYDAVNKQNVSVRHVFNYG 393 (401)
Q Consensus 319 A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~ 393 (401)
|+..|+.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|++. |+|++.+|..|+||+++|.++
T Consensus 206 A~~~g~~~~v~~Ll~----~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~t~l~~A~~~ 275 (299)
T 1s70_B 206 AAAKGYTEVLKLLIQ----ARYDVNIKDYDGWTPLHAAAHWGKEEACRILVEN-LCDMEAVNKVGQTAFDVADED 275 (299)
T ss_dssp HHHHTCHHHHHHHHT----TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCTTTSCCSG
T ss_pred HHHCCcHHHHHHHHH----cCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHH
Confidence 999999999999999 8999999999999999999999999999999976 999999999999999999654
No 33
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.5e-37 Score=254.20 Aligned_cols=179 Identities=21% Similarity=0.258 Sum_probs=162.3
Q ss_pred CCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccc-cCCCCchHHHHH
Q 015738 207 GKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIA-DKDRKMTALHLA 285 (401)
Q Consensus 207 ~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~~~g~t~L~~a 285 (401)
|.||||.|+.. ++.+.++.++..+.......+..|.||||+|+..|+.+++++|++.+++..... ....|.||||.|
T Consensus 2 g~t~L~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A 79 (228)
T 2dzn_A 2 SNYPLHQACME--NEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIA 79 (228)
T ss_dssp -CCHHHHHHHT--TCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHH
T ss_pred CccHHHHHHHh--CCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHH
Confidence 68999999998 889999999998888777789999999999999999999999999995543333 445899999999
Q ss_pred HhcCCHHHHHHhhhcC--CCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChh
Q 015738 286 AGKGDARTVERIISGN--PKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKE 363 (401)
Q Consensus 286 ~~~~~~~~~~~Ll~~~--~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 363 (401)
+..|+.+++++|++.+ .+ ++.++..|.||||+|+..++.+++++|++ .|++++.++..|.||||+|+..|+.+
T Consensus 80 ~~~~~~~~~~~Ll~~g~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~ 154 (228)
T 2dzn_A 80 CSVGNLEVVKSLYDRPLKPD-LNKITNQGVTCLHLAVGKKWFEVSQFLIE----NGASVRIKDKFNQIPLHRAASVGSLK 154 (228)
T ss_dssp HHHCCHHHHHHHHSSSSCCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHH----TTCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred HHcCCHHHHHHHHhCCCCcc-cccCCcCCCCHHHHHHHcCCHhHHHHHHH----cCCCccccCCCCCCHHHHHHHcCCHH
Confidence 9999999999999998 55 68889999999999999999999999999 79999999999999999999999999
Q ss_pred HHHHHHhhcCCChhhhhccCcceeeeeec
Q 015738 364 FHDVMNRSTQANYDAVNKQNVSVRHVFNY 392 (401)
Q Consensus 364 ~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 392 (401)
++++|++...++++.+|..|.||||+|..
T Consensus 155 ~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~ 183 (228)
T 2dzn_A 155 LIELLCGLGKSAVNWQDKQGWTPLFHALA 183 (228)
T ss_dssp HHHHHHTTTCCCSCCCCTTSCCHHHHHHH
T ss_pred HHHHHHhcCcccccCcCCCCCCHHHHHHH
Confidence 99999977449999999999999999943
No 34
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=3.8e-38 Score=265.45 Aligned_cols=227 Identities=15% Similarity=0.078 Sum_probs=203.0
Q ss_pred hHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhc
Q 015738 117 IRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLEN 196 (401)
Q Consensus 117 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~ 196 (401)
++..|..|.||||+|+..|+.+++++|+++|+++... .|.||||+|+. .++.+++++|++.
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~---~g~t~L~~A~~----------------~g~~~~v~~Ll~~ 84 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL---ENEFPLHQAAT----------------LEDTKIVKILLFS 84 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC---TTCCHHHHHTT----------------SSSCHHHHHHHHT
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC---CCCCHHHHHHH----------------cCCHHHHHHHHHC
Confidence 3577889999999999999999999999999885433 49999999998 4489999999999
Q ss_pred CCCCccCCCCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCC-CcHHHHHHHcCCHHHHHHHHhcCccccccccC
Q 015738 197 STSVSHEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYG-WTPIHYAAYYGNYRTVNLLLETDQSASNIADK 275 (401)
Q Consensus 197 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~-~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~ 275 (401)
|++++..+..|.||||+|+.. ++.+.++.|++.+. +++..+..| .||||+|+..|+.+++++|++.|++.. +.
T Consensus 85 ga~~~~~d~~g~t~L~~A~~~--g~~~~v~~Ll~~ga-~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~ 158 (285)
T 3kea_A 85 GLDDSQFDDKGNTALYYAVDS--GNMQTVKLFVKKNW-RLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF---DL 158 (285)
T ss_dssp TCCTTCCCTTSCCHHHHHHHT--TCHHHHHHHHHHCG-GGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTC---CC
T ss_pred CCCCCCcCCCCCcHHHHHHHc--CCHHHHHHHHhcCC-CCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccc---cc
Confidence 999999999999999999999 88999999998854 488888888 899999999999999999999997762 22
Q ss_pred CCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcH-HHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHH
Q 015738 276 DRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNF-LHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLH 354 (401)
Q Consensus 276 ~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~-l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~ 354 (401)
..|.||||.|+..|+.+++++|+++|++ ++.++..|+|| ||+|+..++.+++++|++ .|++++.++ +
T Consensus 159 ~~g~t~L~~A~~~g~~~~v~~Ll~~gad-~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~----~gad~~~~~-------~ 226 (285)
T 3kea_A 159 AILLSCIHITIKNGHVDMMILLLDYMTS-TNTNNSLLFIPDIKLAIDNKDIEMLQALFK----YDINIYSAN-------L 226 (285)
T ss_dssp STHHHHHHHHHHTTCHHHHHHHHHHHHH-TCTTCCCBCCTTHHHHHHHTCHHHHHHHTT----SCBCSTTTT-------G
T ss_pred cCCccHHHHHHHcChHHHHHHHHHcCCC-CCcccCCCCChHHHHHHHcCCHHHHHHHHH----cCCCCCCCC-------h
Confidence 2789999999999999999999999988 78899999998 999999999999999999 899999988 3
Q ss_pred HHHHhCChhHHHHHHhhcCCChhhhhc
Q 015738 355 VLAAVRPKEFHDVMNRSTQANYDAVNK 381 (401)
Q Consensus 355 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~ 381 (401)
.|+..++.+++++|++. |++++..+.
T Consensus 227 ~a~~~~~~~iv~~Ll~~-g~~~~~~~~ 252 (285)
T 3kea_A 227 ENVLLDDAEIAKMIIEK-HVEYKSDSY 252 (285)
T ss_dssp GGGTTTCHHHHHHHHHH-HHHHTTCTT
T ss_pred hhhhcCCHHHHHHHHHc-CCCCCCccc
Confidence 66789999999999977 888775543
No 35
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=264.68 Aligned_cols=214 Identities=24% Similarity=0.241 Sum_probs=167.5
Q ss_pred CCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCC--------CccCCCCCCcHHhHHHhhcccccc-
Q 015738 153 SANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTS--------VSHEGPNGKTALHAAAMRSFAVDT- 223 (401)
Q Consensus 153 ~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~--------~~~~~~~~~t~l~~a~~~~~~~~~- 223 (401)
.+|..+.+||+.|+. .++.+++++|++.|.+ ++..+..+.+||+.|+.. +...
T Consensus 6 kkd~~~~~~L~~A~~----------------~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~--~~~~~ 67 (269)
T 4b93_B 6 KKDYREVEKLLRAVA----------------DGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKC--APAQK 67 (269)
T ss_dssp -CCCHHHHHHHHHHH----------------TTCHHHHHHHHTCC-----------------------------------
T ss_pred ccCccchhHHHHHHH----------------cCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHh--CCHHH
Confidence 456677899999998 4489999999998875 345677889999999877 5444
Q ss_pred hHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCC
Q 015738 224 ALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPK 303 (401)
Q Consensus 224 ~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~ 303 (401)
.+..++. .+.+++..+..|.||||+|+..|+.+++++|++.++++ ..... .|.||++.|+..++.+++++|++.+++
T Consensus 68 ~v~~Ll~-~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~-~~~~~-~g~t~l~~a~~~~~~~~~~~Ll~~g~~ 144 (269)
T 4b93_B 68 RLAKVPA-SGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANA-GARNA-DQAVPLHLACQQGHFQVVKCLLDSNAK 144 (269)
T ss_dssp --------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCT-TCCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHHHHHH-CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCc-CccCC-CCCCccccccccChHHHHHHHHHCCCC
Confidence 4555554 45568999999999999999999999999999999887 33443 789999999999999999999999988
Q ss_pred CccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHHhhcCCChhhhhccC
Q 015738 304 CYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRSTQANYDAVNKQN 383 (401)
Q Consensus 304 ~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g 383 (401)
++.+|..|+||||+|+..|+.+++++|++ .|+++|.++..|.||||+|+..|+.+++++|++. |+|++.+|..|
T Consensus 145 -~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~----~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~-Gad~~~~d~~G 218 (269)
T 4b93_B 145 -PNKKDLSGNTPLIYACSGGHHELVALLLQ----HGASINASNNKGNTALHEAVIEKHVFVVELLLLH-GASVQVLNKRQ 218 (269)
T ss_dssp -SCCCCTTCCCHHHHHHHTTCGGGHHHHHH----TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTS
T ss_pred -CCCCCCCCCCHHHHHHHCCCHHHHHHHHH----CCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCC
Confidence 68899999999999999999999999999 8999999999999999999999999999999976 99999999999
Q ss_pred cceeeeeecc
Q 015738 384 VSVRHVFNYG 393 (401)
Q Consensus 384 ~t~l~~a~~~ 393 (401)
+||||+|.+.
T Consensus 219 ~TpL~~A~~~ 228 (269)
T 4b93_B 219 RTAVDCAEQN 228 (269)
T ss_dssp CCSGGGSCTT
T ss_pred CCHHHHHHhC
Confidence 9999999653
No 36
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.5e-37 Score=253.10 Aligned_cols=217 Identities=18% Similarity=0.186 Sum_probs=198.3
Q ss_pred CCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCCCCCcHHhHH
Q 015738 135 GNVDVVKILTREDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGPNGKTALHAA 214 (401)
Q Consensus 135 ~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a 214 (401)
|+.+++++|+++|++.....+..|.||||+|+. .++.+++++|++.|++++..+..|.||||+|
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~----------------~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 65 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAAR----------------YSRSDAAKRLLEASADANIQDNMGRTPLHAA 65 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHH----------------TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHH----------------cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 678899999999999887778999999999998 4489999999999999999999999999999
Q ss_pred HhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHH
Q 015738 215 AMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTV 294 (401)
Q Consensus 215 ~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~ 294 (401)
+.. ++.+.+++|++.+...++..+..|.||||+|+..|+.+++++|++.++++ +..+. .|.||||+|+..++.+++
T Consensus 66 ~~~--~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v 141 (223)
T 2f8y_A 66 VSA--DAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADV-NAVDD-LGKSALHWAAAVNNVDAA 141 (223)
T ss_dssp HHT--TCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCT-TSCBHHHHHHHTTCHHHH
T ss_pred HHc--CCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCC-cCcCC-CCCcHHHHHHHcCCHHHH
Confidence 999 89999999999888778889999999999999999999999999999887 33443 799999999999999999
Q ss_pred HHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHHhhcCC
Q 015738 295 ERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRSTQA 374 (401)
Q Consensus 295 ~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~ 374 (401)
++|++.+.+ ++.++..|.||||+|+..++.+++++|++ .|++++.+|..|.||||+|+..++.+++++|++. |+
T Consensus 142 ~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~-g~ 215 (223)
T 2f8y_A 142 VVLLKNGAN-KDMQNNREETPLFLAAREGSYETAKVLLD----HFANRDITDHMDRLPRDIAQERMHHDIVRLLDEY-NL 215 (223)
T ss_dssp HHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHH----TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TC
T ss_pred HHHHHcCCC-CCCcCCCCcCHHHHHHHcCCHHHHHHHHH----cCCCCccccccCCCHHHHHHHhcchHHHHHHHHc-CC
Confidence 999999887 68899999999999999999999999999 8999999999999999999999999999999966 77
Q ss_pred Chh
Q 015738 375 NYD 377 (401)
Q Consensus 375 ~~~ 377 (401)
...
T Consensus 216 ~~~ 218 (223)
T 2f8y_A 216 VRS 218 (223)
T ss_dssp SSC
T ss_pred Ccc
Confidence 543
No 37
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1e-37 Score=262.82 Aligned_cols=244 Identities=16% Similarity=0.184 Sum_probs=209.3
Q ss_pred hhhhchHHHHHHHHhhCChhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCC
Q 015738 46 ERENVSTKFVEEILEKCPALLLQVNAKGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKN 125 (401)
Q Consensus 46 ~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 125 (401)
.+..++.++|.+ . +++.+|..|.||||+||..|+.++|++|+++|+++ +.. +|.
T Consensus 10 ~~~~~v~~lL~~----~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~------------------~~~--~g~ 63 (285)
T 3kea_A 10 WKSKQLKSFLSS----K--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALK------------------NLL--ENE 63 (285)
T ss_dssp CCHHHHHHHHHS----T--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGG------------------SCC--TTC
T ss_pred cCHHHHHHHHHh----C--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC------------------CCC--CCC
Confidence 445555555544 2 57899999999999999999999999999999985 233 489
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCC
Q 015738 126 TALHEAVSQGNVDVVKILTREDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGP 205 (401)
Q Consensus 126 t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~ 205 (401)
||||+|+..|+.+++++|+++|+++. ..+..|.||||+|+. .++.+++++|++.|++++..+.
T Consensus 64 t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~t~L~~A~~----------------~g~~~~v~~Ll~~ga~~~~~~~ 126 (285)
T 3kea_A 64 FPLHQAATLEDTKIVKILLFSGLDDS-QFDDKGNTALYYAVD----------------SGNMQTVKLFVKKNWRLMFYGK 126 (285)
T ss_dssp CHHHHHTTSSSCHHHHHHHHTTCCTT-CCCTTSCCHHHHHHH----------------TTCHHHHHHHHHHCGGGGGCSS
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCcHHHHHHH----------------cCCHHHHHHHHhcCCCCCccCC
Confidence 99999999999999999999999854 678899999999998 3489999999999999999999
Q ss_pred CC-CcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchH-HH
Q 015738 206 NG-KTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTA-LH 283 (401)
Q Consensus 206 ~~-~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~-L~ 283 (401)
.| .||||+|+.. ++.+.++.|+..+....+. ..|.||||+|+..|+.+++++|++.|+++ +..+. .|.|| ||
T Consensus 127 ~g~~t~L~~A~~~--~~~~~v~~Ll~~g~~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~gad~-n~~~~-~g~t~~L~ 200 (285)
T 3kea_A 127 TGWKTSFYHAVML--NDVSIVSYFLSEIPSTFDL--AILLSCIHITIKNGHVDMMILLLDYMTST-NTNNS-LLFIPDIK 200 (285)
T ss_dssp SGGGSHHHHHHHT--TCHHHHHHHHTTSCTTCCC--STHHHHHHHHHHTTCHHHHHHHHHHHHHT-CTTCC-CBCCTTHH
T ss_pred CCCCCHHHHHHHc--CCHHHHHHHHhCCCccccc--cCCccHHHHHHHcChHHHHHHHHHcCCCC-CcccC-CCCChHHH
Confidence 99 8999999999 8999999999987653221 27899999999999999999999999887 44444 78887 99
Q ss_pred HHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCC
Q 015738 284 LAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGN 350 (401)
Q Consensus 284 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~ 350 (401)
+|+..++.+++++|+++|++ ++.++ +.|+..++.+++++|++ .|++++.....+.
T Consensus 201 ~A~~~~~~~~v~~Ll~~gad-~~~~~-------~~a~~~~~~~iv~~Ll~----~g~~~~~~~~~~~ 255 (285)
T 3kea_A 201 LAIDNKDIEMLQALFKYDIN-IYSAN-------LENVLLDDAEIAKMIIE----KHVEYKSDSYTKD 255 (285)
T ss_dssp HHHHHTCHHHHHHHTTSCBC-STTTT-------GGGGTTTCHHHHHHHHH----HHHHHTTCTTTTT
T ss_pred HHHHcCCHHHHHHHHHcCCC-CCCCC-------hhhhhcCCHHHHHHHHH----cCCCCCCccccch
Confidence 99999999999999999988 56666 35677999999999999 8988887665544
No 38
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.6e-36 Score=250.24 Aligned_cols=213 Identities=22% Similarity=0.249 Sum_probs=169.6
Q ss_pred ccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCC
Q 015738 120 VNNEKNTALHEAVSQGNVDVVKILTREDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTS 199 (401)
Q Consensus 120 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~ 199 (401)
.|..|.|||+.|+..|+.+++++|++.|.++ ...+..|.|||++|+. .++.+++++|++.|.+
T Consensus 5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~----------------~~~~~~v~~Ll~~~~~ 67 (240)
T 3eu9_A 5 IDDYSTWDIVKATQYGIYERCRELVEAGYDV-RQPDKENVTLLHWAAI----------------NNRIDLVKYYISKGAI 67 (240)
T ss_dssp CSCGGGCCHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH----------------TTCHHHHHHHHHTTCC
T ss_pred cccccchHHHHHHHcCChHHHHHHHHcCCCc-CCCCCCCCCHHHHHHH----------------hCCHHHHHHHHHcCCc
Confidence 3455666666666666666666666666553 2445556666666665 2255566666555544
Q ss_pred CccCCCCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCc
Q 015738 200 VSHEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKM 279 (401)
Q Consensus 200 ~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~ 279 (401)
++ ...+..+.||||+|+..|+.+++++|++.|+++ ...+. .|.
T Consensus 68 ~~-----------------------------------~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~ 110 (240)
T 3eu9_A 68 VD-----------------------------------QLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP-SLIDG-EGC 110 (240)
T ss_dssp TT-----------------------------------CCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-TSC
T ss_pred ch-----------------------------------hhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCC-cccCC-CCC
Confidence 32 233445789999999999999999999998887 33333 789
Q ss_pred hHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCC-hhHHHHHHhcCCccccccccCCC-CCCcHHHHHH
Q 015738 280 TALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFH-VGQLRNLLENNPLARSLIDEGDA-EGNTPLHVLA 357 (401)
Q Consensus 280 t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~-~~~~~~Ll~~~~~~~~~~~~~~~-~g~t~L~~A~ 357 (401)
||||.|+..++.+++++|++.+.+ ++.++..|.||||+|+..++ .+++++|++ .+++++..+. .|.||||+|+
T Consensus 111 t~l~~A~~~~~~~~~~~Ll~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~----~~~~~~~~~~~~g~t~L~~A~ 185 (240)
T 3eu9_A 111 SCIHLAAQFGHTSIVAYLIAKGQD-VDMMDQNGMTPLMWAAYRTHSVDPTRLLLT----FNVSVNLGDKYHKNTALHWAV 185 (240)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHCCSSTTHHHHHH----TTCCTTCCCTTTCCCHHHHHH
T ss_pred CHHHHHHHcCHHHHHHHHHhcCCC-ccccCCCCCcHHHHHHHhCChHHHHHHHHh----cCCCcchhhccCCCcHHHHHH
Confidence 999999999999999999999988 68899999999999997766 899999999 8999999997 9999999999
Q ss_pred HhCChhHHHHHHhhcCCChhhhhccCcceeeeeec
Q 015738 358 AVRPKEFHDVMNRSTQANYDAVNKQNVSVRHVFNY 392 (401)
Q Consensus 358 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 392 (401)
..++.+++++|++. |++++.+|..|.||+++|.+
T Consensus 186 ~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~ 219 (240)
T 3eu9_A 186 LAGNTTVISLLLEA-GANVDAQNIKGESALDLAKQ 219 (240)
T ss_dssp HHTCHHHHHHHHHH-TCCTTCBCTTSCBHHHHHHH
T ss_pred HcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHH
Confidence 99999999999977 99999999999999999943
No 39
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2e-36 Score=246.51 Aligned_cols=213 Identities=27% Similarity=0.249 Sum_probs=131.3
Q ss_pred hhhchHHHHHHHHhhCChhhhcc-cCCCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCC
Q 015738 47 RENVSTKFVEEILEKCPALLLQV-NAKGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKN 125 (401)
Q Consensus 47 ~~~~~~~~l~~~~~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 125 (401)
|+.+++++|++ .|.+++.. |..|.||||+||..|+.++|++|+++|+++ +..+..|.
T Consensus 2 g~~~~i~~Ll~----~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~------------------~~~~~~g~ 59 (223)
T 2f8y_A 2 DAPAVISDFIY----QGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA------------------NIQDNMGR 59 (223)
T ss_dssp ---CCEETTEE----TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT------------------TCCCTTSC
T ss_pred CcHHHHHHHHH----cCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCC------------------CCcCCCCC
Confidence 55666666665 46655554 788888888888888888888888888774 45677888
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCC
Q 015738 126 TALHEAVSQGNVDVVKILTREDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGP 205 (401)
Q Consensus 126 t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~ 205 (401)
||||+|+..|+.+++++|+++++......+..|.||||+|+. .++.+++++|++.|++++..+.
T Consensus 60 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~----------------~~~~~~~~~Ll~~g~~~~~~~~ 123 (223)
T 2f8y_A 60 TPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAAR----------------LAVEGMLEDLINSHADVNAVDD 123 (223)
T ss_dssp CHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHH----------------HTCHHHHHHHHHTTCCTTCBCT
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHH----------------hCcHHHHHHHHHcCCCCcCcCC
Confidence 888888888888888888888875566777788888888887 2377888888888777766555
Q ss_pred CCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHH
Q 015738 206 NGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLA 285 (401)
Q Consensus 206 ~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a 285 (401)
.|.||||+|+.. ++.+.+++|++.+ .+++..+..|.||||+|+..|+.+++++|++.|+++ ...+. .|.||+++|
T Consensus 124 ~g~t~L~~A~~~--~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~-~g~t~l~~A 198 (223)
T 2f8y_A 124 LGKSALHWAAAV--NNVDAAVVLLKNG-ANKDMQNNREETPLFLAAREGSYETAKVLLDHFANR-DITDH-MDRLPRDIA 198 (223)
T ss_dssp TSCBHHHHHHHT--TCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-TCCCHHHHH
T ss_pred CCCcHHHHHHHc--CCHHHHHHHHHcC-CCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC-ccccc-cCCCHHHHH
Confidence 555555555544 4444444444432 223344444444444444444444444444444433 11111 334444444
Q ss_pred HhcCCHHHHHHhhhcCC
Q 015738 286 AGKGDARTVERIISGNP 302 (401)
Q Consensus 286 ~~~~~~~~~~~Ll~~~~ 302 (401)
+..++.+++++|+++|.
T Consensus 199 ~~~~~~~i~~~L~~~g~ 215 (223)
T 2f8y_A 199 QERMHHDIVRLLDEYNL 215 (223)
T ss_dssp HHTTCHHHHHHHHHTTC
T ss_pred HHhcchHHHHHHHHcCC
Confidence 44444444444444433
No 40
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-38 Score=273.90 Aligned_cols=248 Identities=11% Similarity=0.061 Sum_probs=162.0
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCC
Q 015738 71 AKGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGY 150 (401)
Q Consensus 71 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~ 150 (401)
..+.+|++ ....++|++|+++|++ ++..+..|.|+++ |+.+++++|+++|.+.
T Consensus 21 ~~~~~~~~----~~~~dlv~~ll~~ga~------------------i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~ 73 (327)
T 1sw6_A 21 DRTAGPII----TFTHDLTSDFLSSPLK------------------IMKALPSPVVNDN-----EQKMKLEAFLQRLLFP 73 (327)
T ss_dssp ----CCEE----ECCTTCCCSTTTSSCC------------------CEECBCCCCCCCH-----HHHHHHHHHHHHHHC-
T ss_pred cccccchh----hhcCchHHHHhhCCcc------------------cccCCCCCCcccC-----chhHHHHHHHHhccCC
Confidence 34455555 4667889999999998 4677888999987 9999999999998763
Q ss_pred CCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccchHHHHHH
Q 015738 151 PYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLLE 230 (401)
Q Consensus 151 ~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~ 230 (401)
+.+++++|+.... .. .-........+..|.++.. ...+ +..++.
T Consensus 74 -------~~~~~~~a~~~~~----------------~~----------~~~~~~~~~~~~~~~a~~~--~~~~-~~~~l~ 117 (327)
T 1sw6_A 74 -------EIQEMPTSLNNDS----------------SN----------RNSEGGSSNQQQQHVSFDS--LLQE-VNDAFP 117 (327)
T ss_dssp ---------------------------------------------------------------CHHH--HHHH-HHHHCT
T ss_pred -------ccccchHhhhccc----------------cc----------ccccccCCccchhHHHHHh--hHHH-HHHHHH
Confidence 2345666654100 00 0000011122344555554 3333 444444
Q ss_pred hhcccccc-cccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCC---HHHHHHhhhcCCCCcc
Q 015738 231 KKKNLIKE-TDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGD---ARTVERIISGNPKCYE 306 (401)
Q Consensus 231 ~~~~~~~~-~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~---~~~~~~Ll~~~~~~~~ 306 (401)
..+.+++. .+..|.||||+|+..|+.+++++|++.|+++ +..+. .|.||||+|+..|+ .++++.|++.+...++
T Consensus 118 ~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~-~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~ 195 (327)
T 1sw6_A 118 NTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDN-MGESCLVKAVKSVNNYDSGTFEALLDYLYPCLI 195 (327)
T ss_dssp TSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCT-TCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGG
T ss_pred hcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC-CCCCHHHHHHHhcccccHHHHHHHHHhhhcccc
Confidence 55556777 7888999999999999999999999999887 44444 78899999999888 6777778777755578
Q ss_pred ccCCCCCcHHHHHHH----hCChhHHHHHHhcCC----------------ccccccccCCCCCCcHHHHHHHhCChhHHH
Q 015738 307 LVDNRGCNFLHYAMV----SFHVGQLRNLLENNP----------------LARSLIDEGDAEGNTPLHVLAAVRPKEFHD 366 (401)
Q Consensus 307 ~~~~~g~t~l~~A~~----~~~~~~~~~Ll~~~~----------------~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~ 366 (401)
.+|..|+||||+|+. .++.+++++|++... ..|++++.++..|.||||+|+. ++
T Consensus 196 ~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~ 269 (327)
T 1sw6_A 196 LEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LK 269 (327)
T ss_dssp EECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HH
T ss_pred CCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HH
Confidence 899999999999998 889999999998321 1289999999999999999985 88
Q ss_pred HHHhhcCCChhhhhccCcceeeeeec
Q 015738 367 VMNRSTQANYDAVNKQNVSVRHVFNY 392 (401)
Q Consensus 367 ~Ll~~~~~~~~~~~~~g~t~l~~a~~ 392 (401)
+|+.. +++.+|..|.||||+|.+
T Consensus 270 ~Ll~~---~~n~~d~~G~TpLh~A~~ 292 (327)
T 1sw6_A 270 WIIAN---MLNAQDSNGDTCLNIAAR 292 (327)
T ss_dssp HHHHH---TTTCCCTTSCCHHHHHHH
T ss_pred HHHHh---CCCCCCCCCCCHHHHHHH
Confidence 88866 689999999999999943
No 41
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=9.1e-35 Score=238.16 Aligned_cols=203 Identities=24% Similarity=0.252 Sum_probs=146.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHh-hhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCC
Q 015738 72 KGDTPLHLAAKFGHFEIVRVLIER-AKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGY 150 (401)
Q Consensus 72 ~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~ 150 (401)
.|+||||+||..|+.++|++|++. |++ ++..|..|.||||+|+..|+.+++++|++++++.
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~------------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~ 63 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCE------------------VHQRGAMGETALHIAALYDNLEAAMVLMEAAPEL 63 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSC------------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGG
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCC------------------cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchh
Confidence 589999999999999999999998 776 4677889999999999999999999999998874
Q ss_pred C----CCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccchHH
Q 015738 151 P----YSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDTALP 226 (401)
Q Consensus 151 ~----~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~ 226 (401)
. ...+..|.||||+|+. .++.+++++|++.|++++..+... .+.
T Consensus 64 ~~~~~~~~~~~g~t~L~~A~~----------------~~~~~~v~~Ll~~g~~~~~~~~~~--~~~-------------- 111 (232)
T 2rfa_A 64 VFEPMTSELYEGQTALHIAVI----------------NQNVNLVRALLARGASVSARATGS--VFH-------------- 111 (232)
T ss_dssp GGCCCCSTTTTTCCHHHHHHH----------------TTCHHHHHHHHHTTCCTTCCCCSG--GGS--------------
T ss_pred ccccccccCCCCcCHHHHHHH----------------cCCHHHHHHHHhCCCCCCcccCCc--cee--------------
Confidence 2 4567789999999998 348999999999999988765432 110
Q ss_pred HHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHH----HHhhhcCC
Q 015738 227 KLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTV----ERIISGNP 302 (401)
Q Consensus 227 ~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~----~~Ll~~~~ 302 (401)
...+..+..|.||||+|+..|+.+++++|++.|+++ +..+. .|.||||+|+..++.+++ ++|++.++
T Consensus 112 -------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~-~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~ 182 (232)
T 2rfa_A 112 -------YRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI-RAQDS-LGNTVLHILILQPNKTFACQMYNLLLSYDG 182 (232)
T ss_dssp -------CCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHTCSCHHHHHHHHHHHHHTTC
T ss_pred -------ecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCC-CCCCHHHHHHHcCChHHHHHHHHHHHhcCC
Confidence 012334556667777777777777777777666655 22332 566666666666666655 66666655
Q ss_pred CCc-----cccCCCCCcHHHHHHHhCChhHHHHHHh
Q 015738 303 KCY-----ELVDNRGCNFLHYAMVSFHVGQLRNLLE 333 (401)
Q Consensus 303 ~~~-----~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 333 (401)
+.. +.+|..|+||||+|+..|+.+++++|++
T Consensus 183 ~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~ 218 (232)
T 2rfa_A 183 GDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQ 218 (232)
T ss_dssp SCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred chhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 422 3455556666666666666666666665
No 42
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=7.5e-36 Score=245.13 Aligned_cols=215 Identities=19% Similarity=0.190 Sum_probs=167.2
Q ss_pred hccCCCChHHHHHHHcCCHHHHHHHHhcCCC---CCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHh
Q 015738 119 MVNNEKNTALHEAVSQGNVDVVKILTREDPG---YPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLE 195 (401)
Q Consensus 119 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~---~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~ 195 (401)
..|.+|.||||+|+..|+.+++++|++.+.. .....+..|.||||+|+. .++.+++++|++
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~----------------~~~~~~v~~Ll~ 66 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVI----------------TNQPEIAEALLG 66 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHH----------------TTCHHHHHCCCS
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHH----------------cCCHHHHHHHHH
Confidence 4577899999999999999999999987653 245667778888888887 337888888888
Q ss_pred cCCCCccCCCCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCcccc----c
Q 015738 196 NSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSAS----N 271 (401)
Q Consensus 196 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~----~ 271 (401)
.|++++..+.. |.||||+|+..|+.+++++|++.+++.. .
T Consensus 67 ~g~~~~~~~~~------------------------------------g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 110 (236)
T 1ikn_D 67 AGCDPELRDFR------------------------------------GNTPLHLACEQGCLASVGVLTQSCTTPHLHSIL 110 (236)
T ss_dssp CCCCSCCCCTT------------------------------------CCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGG
T ss_pred cCCCCCCcCCC------------------------------------CCCHHHHHHHcCCHHHHHHHHhcccchhHHHHh
Confidence 87777655444 5555555555666666666666654321 1
Q ss_pred cccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCC-CCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCC
Q 015738 272 IADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDN-RGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGN 350 (401)
Q Consensus 272 ~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~ 350 (401)
......|.||||+|+..|+.+++++|++.|++ ++.++. .|+||||+|+..++.+++++|++ .|++++.+|..|.
T Consensus 111 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~ 185 (236)
T 1ikn_D 111 KATNYNGHTCLHLASIHGYLGIVELLVSLGAD-VNAQEPCNGRTALHLAVDLQNPDLVSLLLK----CGADVNRVTYQGY 185 (236)
T ss_dssp GCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHT----TTCCSCCCCTTCC
T ss_pred hccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCCCcccCCCC
Confidence 12234688999999999999999999999888 577776 89999999999999999999999 7999999999999
Q ss_pred cHHHHHHHhCChhHHHHHHhhcCCChh--hhhccCcceeeeee
Q 015738 351 TPLHVLAAVRPKEFHDVMNRSTQANYD--AVNKQNVSVRHVFN 391 (401)
Q Consensus 351 t~L~~A~~~~~~~~~~~Ll~~~~~~~~--~~~~~g~t~l~~a~ 391 (401)
||||+|+..++.+++++|++. |++.. .++..|.||.+.+.
T Consensus 186 tpl~~A~~~~~~~~~~~Ll~~-ga~~~~~~~~~~~~~~~~~~~ 227 (236)
T 1ikn_D 186 SPYQLTWGRPSTRIQQQLGQL-TLENLQMLPESEDEESYDTES 227 (236)
T ss_dssp CGGGGCTTSSCHHHHHHHHTT-SCGGGSSCCCCCTTTCCCCC-
T ss_pred CHHHHHHccCchHHHHHHHHc-chhhhhcCCccchHHHHhhhc
Confidence 999999999999999999966 99877 88999999999883
No 43
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=1.2e-34 Score=243.28 Aligned_cols=237 Identities=15% Similarity=0.088 Sum_probs=160.9
Q ss_pred ChhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHc---CCHHH
Q 015738 63 PALLLQVNAKGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQ---GNVDV 139 (401)
Q Consensus 63 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~---~~~~~ 139 (401)
++..+..|..|.||||+||..|+.++|+.|++.+......... .....+..|.||||+|+.. |+.++
T Consensus 3 ~a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~----------~~~~~~~~g~tpL~~A~~~~~~g~~~~ 72 (273)
T 2pnn_A 3 SAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTD----------SEFKDPETGKTCLLKAMLNLHNGQNDT 72 (273)
T ss_dssp --------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTS----------GGGSCTTTCCCHHHHHHHSCBTTBCHH
T ss_pred cccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCC----------cccccCcCCCCHHHHHHHHHhcCChHH
Confidence 4455678999999999999999999999999987653211100 0113478999999999987 99999
Q ss_pred HHHHHhcCCCCC----------CCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCCCCCc
Q 015738 140 VKILTREDPGYP----------YSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGPNGKT 209 (401)
Q Consensus 140 ~~~Ll~~~~~~~----------~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t 209 (401)
+++|+++|++.. ...+..|.||||+|+. .++.+++++|++.|++++..+..+..
T Consensus 73 v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~----------------~g~~~~v~~Ll~~ga~~~~~~~~~~~ 136 (273)
T 2pnn_A 73 IALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIE----------------RRNMTLVTLLVENGADVQAAANGDFF 136 (273)
T ss_dssp HHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHH----------------TTCHHHHHHHHHTTCCTTCCBCSGGG
T ss_pred HHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHH----------------cCCHHHHHHHHHCCCCcCcccccccc
Confidence 999999875421 1234567777777776 33677777777777777665543200
Q ss_pred HHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcC
Q 015738 210 ALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKG 289 (401)
Q Consensus 210 ~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~ 289 (401)
. . .+ .......|.||||+|+..|
T Consensus 137 ----------~--------------------------------------------~-~~--~~~~~~~g~tpL~~A~~~g 159 (273)
T 2pnn_A 137 ----------K--------------------------------------------K-TK--GRPGFYFGELPLSLAACTN 159 (273)
T ss_dssp ----------S--------------------------------------------S-CS--SSCCCCSCBSHHHHHHHTT
T ss_pred ----------c--------------------------------------------c-cc--ccccccCCCCHHHHHHHcC
Confidence 0 0 00 0011125778888888888
Q ss_pred CHHHHHHhhh---cCCCCccccCCCCCcHHHHHHHhCC---------hhHHHHHHhcCCccccccc-------cCCCCCC
Q 015738 290 DARTVERIIS---GNPKCYELVDNRGCNFLHYAMVSFH---------VGQLRNLLENNPLARSLID-------EGDAEGN 350 (401)
Q Consensus 290 ~~~~~~~Ll~---~~~~~~~~~~~~g~t~l~~A~~~~~---------~~~~~~Ll~~~~~~~~~~~-------~~~~~g~ 350 (401)
+.+++++|++ .|.+ ++.+|..|+||||+|+..++ .+++++|++ .|++++ .+|..|.
T Consensus 160 ~~~~v~~Ll~~~~~gad-~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~----~ga~~n~~~~~~~~~d~~g~ 234 (273)
T 2pnn_A 160 QLAIVKFLLQNSWQPAD-ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILI----LGAKLHPTLKLEEITNRKGL 234 (273)
T ss_dssp CHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHH----HHHHHCTTCCGGGCCCTTSC
T ss_pred CHHHHHHHHhcccCCCC-ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHH----hhhhcccccccccccCCCCC
Confidence 8888888888 6666 67888899999999998887 789999999 888886 4899999
Q ss_pred cHHHHHHHhCChhHHHHHHhhcCC-ChhhhhccCcceee
Q 015738 351 TPLHVLAAVRPKEFHDVMNRSTQA-NYDAVNKQNVSVRH 388 (401)
Q Consensus 351 t~L~~A~~~~~~~~~~~Ll~~~~~-~~~~~~~~g~t~l~ 388 (401)
||||+|+..|+.+++++|++. |+ |+......+.+|-+
T Consensus 235 TpL~~A~~~g~~~iv~~Ll~~-ga~dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 235 TPLALAASSGKIGVLAYILQR-EIHEPECRHAAAHHHHH 272 (273)
T ss_dssp CHHHHHHHTTCHHHHHHHHHH-HTC--------------
T ss_pred CHHHHHHHhChHHHHHHHHHC-CCCCchhhhhhhhhccC
Confidence 999999999999999999977 77 88888888877643
No 44
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.5e-35 Score=243.30 Aligned_cols=182 Identities=19% Similarity=0.245 Sum_probs=159.5
Q ss_pred cCCCCCCcHHhHHHhhcccccchHHHHHHhhcc---cccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCC
Q 015738 202 HEGPNGKTALHAAAMRSFAVDTALPKLLEKKKN---LIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRK 278 (401)
Q Consensus 202 ~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~---~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g 278 (401)
..+..|.||||+|+.. ++.+.++.++..... .++..+..|.||||+|+..|+.+++++|++.|+++ +..+. .|
T Consensus 3 ~~d~~g~t~L~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g 78 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIH--EEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDF-RG 78 (236)
T ss_dssp ----CCCCTTHHHHHT--TCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCT-TC
T ss_pred cCCCCCCchhHHHHHc--CChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC-CC
Confidence 3567899999999988 888888888876653 57888999999999999999999999999999887 44443 89
Q ss_pred chHHHHHHhcCCHHHHHHhhhcCCC-----CccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCC-CCCcH
Q 015738 279 MTALHLAAGKGDARTVERIISGNPK-----CYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDA-EGNTP 352 (401)
Q Consensus 279 ~t~L~~a~~~~~~~~~~~Ll~~~~~-----~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~-~g~t~ 352 (401)
.||||+|+..|+.+++++|++.+.. ..+..+..|.||||+|+..++.+++++|++ .|++++.++. .|.||
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~~g~tp 154 (236)
T 1ikn_D 79 NTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVS----LGADVNAQEPCNGRTA 154 (236)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHH----HTCCTTCCCTTTCCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCCCCCCCCCCCCH
Confidence 9999999999999999999999864 256788899999999999999999999999 8999999997 99999
Q ss_pred HHHHHHhCChhHHHHHHhhcCCChhhhhccCcceeeeeec
Q 015738 353 LHVLAAVRPKEFHDVMNRSTQANYDAVNKQNVSVRHVFNY 392 (401)
Q Consensus 353 L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 392 (401)
||+|+..|+.+++++|++. |++++.+|..|.||+++|..
T Consensus 155 L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~ 193 (236)
T 1ikn_D 155 LHLAVDLQNPDLVSLLLKC-GADVNRVTYQGYSPYQLTWG 193 (236)
T ss_dssp HHHHHHTTCHHHHHHHHTT-TCCSCCCCTTCCCGGGGCTT
T ss_pred HHHHHHcCCHHHHHHHHHc-CCCCCcccCCCCCHHHHHHc
Confidence 9999999999999999976 99999999999999999943
No 45
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.4e-33 Score=231.00 Aligned_cols=200 Identities=23% Similarity=0.205 Sum_probs=174.7
Q ss_pred CCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhc-CCCCccCCCCCCcHHhHHHhhcccccchHHHHHHhhccc
Q 015738 157 YGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLEN-STSVSHEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNL 235 (401)
Q Consensus 157 ~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~-~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~ 235 (401)
.|.||||+|+. .++.++++.|++. |++++..+..|.||||+|+.. ++.+.++.|++.+...
T Consensus 2 ~g~t~L~~A~~----------------~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~--g~~~~v~~Ll~~~~~~ 63 (232)
T 2rfa_A 2 IWESPLLLAAK----------------ENDVQALSKLLKFEGCEVHQRGAMGETALHIAALY--DNLEAAMVLMEAAPEL 63 (232)
T ss_dssp CTTCHHHHHHH----------------TTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHT--TCHHHHHHHHHHCGGG
T ss_pred CCCCHHHHHHH----------------cCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHc--CCHHHHHHHHHcCchh
Confidence 48999999999 4489999999998 999999999999999999999 8999999999987653
Q ss_pred c----cccccCCCcHHHHHHHcCCHHHHHHHHhcCcccccccc-----------CCCCchHHHHHHhcCCHHHHHHhhhc
Q 015738 236 I----KETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIAD-----------KDRKMTALHLAAGKGDARTVERIISG 300 (401)
Q Consensus 236 ~----~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~-----------~~~g~t~L~~a~~~~~~~~~~~Ll~~ 300 (401)
. +..+..|.||||+|+..|+.+++++|++.|++...... ...|.||||.|+..|+.+++++|+++
T Consensus 64 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 143 (232)
T 2rfa_A 64 VFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEH 143 (232)
T ss_dssp GGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHT
T ss_pred ccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 2 45667899999999999999999999999988743322 12689999999999999999999999
Q ss_pred CCCCccccCCCCCcHHHHHHHhCChhHH----HHHHhcCCcccccc------ccCCCCCCcHHHHHHHhCChhHHHHHHh
Q 015738 301 NPKCYELVDNRGCNFLHYAMVSFHVGQL----RNLLENNPLARSLI------DEGDAEGNTPLHVLAAVRPKEFHDVMNR 370 (401)
Q Consensus 301 ~~~~~~~~~~~g~t~l~~A~~~~~~~~~----~~Ll~~~~~~~~~~------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 370 (401)
|++ ++.+|..|+||||+|+..++.+++ ++|++ .|+++ +.+|..|.||||+|+..|+.+++++|++
T Consensus 144 ga~-~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~----~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~ 218 (232)
T 2rfa_A 144 GAD-IRAQDSLGNTVLHILILQPNKTFACQMYNLLLS----YDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQ 218 (232)
T ss_dssp TCC-TTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHH----TTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCC-CCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHh----cCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 988 788999999999999999999988 88888 67776 6899999999999999999999999997
Q ss_pred hcCCChhhhh
Q 015738 371 STQANYDAVN 380 (401)
Q Consensus 371 ~~~~~~~~~~ 380 (401)
. |++.....
T Consensus 219 ~-g~~~~~~~ 227 (232)
T 2rfa_A 219 K-RKHIAAAH 227 (232)
T ss_dssp H-HHHC----
T ss_pred c-Cccchhhh
Confidence 7 66554443
No 46
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=1.3e-33 Score=234.84 Aligned_cols=213 Identities=18% Similarity=0.177 Sum_probs=175.2
Q ss_pred CCChHHHHHHHcCCHH----HHHHHHhcCCCCCC---CCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHh
Q 015738 123 EKNTALHEAVSQGNVD----VVKILTREDPGYPY---SANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLE 195 (401)
Q Consensus 123 ~g~t~L~~A~~~~~~~----~~~~Ll~~~~~~~~---~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~ 195 (401)
.|+||||+|+..|+.+ ++++|++.+.++.. ..+..|.||||+|+.. ...++.+++++|++
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~-------------~~~g~~~~v~~Ll~ 67 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLN-------------LQDGVNACIMPLLQ 67 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHT-------------CBTTBCTTHHHHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHc-------------cccchHHHHHHHHh
Confidence 3789999999999997 66777788888653 3788999999999982 01148899999999
Q ss_pred cCCCCccCCCCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccC
Q 015738 196 NSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADK 275 (401)
Q Consensus 196 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~ 275 (401)
.|++++..+.. + .......+..|.||||+|+..|+.+++++|++.|+++. ..+.
T Consensus 68 ~g~~~~~~~~~----------------------~---~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~ 121 (256)
T 2etb_A 68 IDKDSGNPKPL----------------------V---NAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVH-LRAC 121 (256)
T ss_dssp HHHHTTCSSCG----------------------G---GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCC
T ss_pred cCCcccchhhh----------------------c---ccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cccc
Confidence 88877543310 0 00123345679999999999999999999999998873 3333
Q ss_pred C------------CCchHHHHHHhcCCHHHHHHhhh---cCCCCccccCCCCCcHHHHHHH--hCChh-------HHHHH
Q 015738 276 D------------RKMTALHLAAGKGDARTVERIIS---GNPKCYELVDNRGCNFLHYAMV--SFHVG-------QLRNL 331 (401)
Q Consensus 276 ~------------~g~t~L~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~g~t~l~~A~~--~~~~~-------~~~~L 331 (401)
. .|.||||+|+..|+.+++++|++ .|.+ ++.+|..|+||||+|+. .++.+ ++++|
T Consensus 122 ~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~-~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~L 200 (256)
T 2etb_A 122 GRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS-LEATDSLGNTVLHALVMIADNSPENSALVIHMYDGL 200 (256)
T ss_dssp SGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHH
T ss_pred cccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC-cCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHH
Confidence 1 29999999999999999999999 7777 78999999999999999 78888 99999
Q ss_pred HhcCCcccccc-------ccCCCCCCcHHHHHHHhCChhHHHHHHhhcCCChhhhh
Q 015738 332 LENNPLARSLI-------DEGDAEGNTPLHVLAAVRPKEFHDVMNRSTQANYDAVN 380 (401)
Q Consensus 332 l~~~~~~~~~~-------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~ 380 (401)
++ .|+++ +.+|..|.||||+|+..|+.+++++|+++ |++.....
T Consensus 201 l~----~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~-g~~~~~~~ 251 (256)
T 2etb_A 201 LQ----MGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQR-EFSGAAAH 251 (256)
T ss_dssp HH----HHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH-HHHHHHHH
T ss_pred HH----cCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhC-CCCCCCcc
Confidence 99 89999 99999999999999999999999999977 76655443
No 47
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=3.5e-34 Score=238.20 Aligned_cols=210 Identities=22% Similarity=0.191 Sum_probs=169.1
Q ss_pred cCCCeeEEeecchhhhhchHHHHHHHHhhCChhhhc----ccCCCCcHHHHHHHc---CCHHHHHHHHHhhhhhccCCCC
Q 015738 33 AKNTILHINIISSERENVSTKFVEEILEKCPALLLQ----VNAKGDTPLHLAAKF---GHFEIVRVLIERAKLAQRGDEE 105 (401)
Q Consensus 33 ~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~----~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~ 105 (401)
.|+||||+| +..|+.+.++.+++.+...+.+++. .|..|.||||+||.. |+.++|++|+++|++.+.....
T Consensus 1 ~G~t~L~~A--~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 78 (256)
T 2etb_A 1 FDRDRLFSV--VSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPL 78 (256)
T ss_dssp CCHHHHHHH--HHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCG
T ss_pred CCccHHHHH--HHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhh
Confidence 378999999 9999999887777777778899998 899999999999999 9999999999999986432210
Q ss_pred CCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCC-------------CCCHHHHHHhcCCch
Q 015738 106 PESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYPYSANNY-------------GKTPLYMAAEYENRS 172 (401)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-------------~~t~l~~a~~~~~~~ 172 (401)
+.......|..|.||||+|+..|+.+++++|+++|+++. ..+.. |.||||+|+.
T Consensus 79 -------~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~~~~~~~~~~~g~tpL~~A~~----- 145 (256)
T 2etb_A 79 -------VNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVH-LRACGRFFQKHQGTCFYFGELPLSLAAC----- 145 (256)
T ss_dssp -------GGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCCSGGGSCCSSSCCCSCSSHHHHHHH-----
T ss_pred -------cccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cccccccccccccccccCCCCHHHHHHH-----
Confidence 000012345679999999999999999999999999865 44443 9999999998
Q ss_pred hHHHhhhhhccCCCHHHHHHHHh---cCCCCccCCCCCCcHHhHHHhhcccccc-------hHHHHHHhhcccc------
Q 015738 173 DMLRGLLENRTSASFDMVLALLE---NSTSVSHEGPNGKTALHAAAMRSFAVDT-------ALPKLLEKKKNLI------ 236 (401)
Q Consensus 173 ~~~~~l~~~~~~~~~~~~~~Ll~---~~~~~~~~~~~~~t~l~~a~~~~~~~~~-------~~~~ll~~~~~~~------ 236 (401)
.++.+++++|++ .|++++..+..|.||||+|+....+..+ +++.|++.+.. +
T Consensus 146 -----------~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~-~~~~~~~ 213 (256)
T 2etb_A 146 -----------TKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGAR-LCPTVQL 213 (256)
T ss_dssp -----------TTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH-HSTTCCG
T ss_pred -----------cCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCC-ccccccc
Confidence 348899999999 8999999999999999999984225555 66666666544 5
Q ss_pred -cccccCCCcHHHHHHHcCCHHHHHHHHhcCccc
Q 015738 237 -KETDQYGWTPIHYAAYYGNYRTVNLLLETDQSA 269 (401)
Q Consensus 237 -~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~ 269 (401)
+..+..|.||||+|+..|+.+++++|+++|+..
T Consensus 214 ~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 214 EEISNHQGLTPLKLAAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 677788888888888888888888888877654
No 48
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=1.5e-32 Score=219.87 Aligned_cols=193 Identities=18% Similarity=0.205 Sum_probs=135.3
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCc
Q 015738 122 NEKNTALHEAVSQGNVDVVKILTREDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVS 201 (401)
Q Consensus 122 ~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~ 201 (401)
..+.||||.|+..|+.+++++|++.++......+..|.||||+|+. .++.+++++|++.|++++
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~----------------~~~~~~v~~Ll~~g~~~~ 66 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVH----------------NNDIEIAKALIDRGADIN 66 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHH----------------HTCHHHHHHHHHTTCCTT
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH----------------cCCHHHHHHHHHcCCCCC
Confidence 4678999999999999999999988875566778888899999887 337888888888888776
Q ss_pred cCCCCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchH
Q 015738 202 HEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTA 281 (401)
Q Consensus 202 ~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~ 281 (401)
..+..|.||| |+|+..|+.+++++|++.+.......+. .|.||
T Consensus 67 ~~~~~g~t~l------------------------------------~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-~g~t~ 109 (201)
T 3hra_A 67 LQNSISDSPY------------------------------------LYAGAQGRTEILAYMLKHATPDLNKHNR-YGGNA 109 (201)
T ss_dssp CCCTTSCCHH------------------------------------HHHHHTTCHHHHHHHHHHSCCCTTCCCT-TSCCS
T ss_pred CCCCCCCCHH------------------------------------HHHHHcCCHHHHHHHHhccCcccccccC-CCCcH
Confidence 6655555554 5555555555555555333322122222 55566
Q ss_pred HHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCC-----hhHHHHHHhcCCccccccccCCCCCCcHHHHH
Q 015738 282 LHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFH-----VGQLRNLLENNPLARSLIDEGDAEGNTPLHVL 356 (401)
Q Consensus 282 L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~-----~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A 356 (401)
||.|+..++.+++++|++.+...++.+|..|+||||+|+..++ .+++++|++ .|++++.+|..|.||||+|
T Consensus 110 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~----~ga~~~~~~~~g~t~l~~A 185 (201)
T 3hra_A 110 LIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLME----NGADQSIKDNSGRTAMDYA 185 (201)
T ss_dssp HHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHH----TTCCTTCCCTTSCCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHH----CCCCCCccCCCCCCHHHHH
Confidence 6666666666666666666644466677777777777777776 777777777 6777777777777777777
Q ss_pred HHhCChhHHHHHHhh
Q 015738 357 AAVRPKEFHDVMNRS 371 (401)
Q Consensus 357 ~~~~~~~~~~~Ll~~ 371 (401)
+..|+.+++++|++.
T Consensus 186 ~~~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 186 NQKGYTEISKILAQY 200 (201)
T ss_dssp HHHTCHHHHHHHHTC
T ss_pred HHcCCHhHHHHHHhc
Confidence 777777777777754
No 49
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=9.5e-35 Score=223.28 Aligned_cols=160 Identities=26% Similarity=0.358 Sum_probs=145.1
Q ss_pred chhhhhhhhcCCCCchhhhhhHHHHHHHHhhcCCCeeEEeecchhhhhchHHHHHHHHhhCChhhhcccCCCCcHHHHHH
Q 015738 2 DLNFFKAASAGNSEPFKDMERDVIERLLTAKAKNTILHINIISSERENVSTKFVEEILEKCPALLLQVNAKGDTPLHLAA 81 (401)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~ 81 (401)
.++|+.||+.|+.++|++|+++|++.+..+..|.||||+| +..++.+++++|++ .|++++.+|..|+||||+||
T Consensus 5 g~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a--~~~~~~~~~~~ll~----~gad~~~~d~~g~TpLh~A~ 78 (169)
T 4gpm_A 5 GKRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHA--AENGHKEVVKLLIS----KGADVNAKDSDGRTPLHHAA 78 (169)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH--HHcCCHHHHHHHHh----cccchhhhccCCCCHHHHHH
Confidence 3679999999999999999999999988999999999999 99999999999998 79999999999999999999
Q ss_pred HcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCH
Q 015738 82 KFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYPYSANNYGKTP 161 (401)
Q Consensus 82 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~ 161 (401)
..|+.++|++|+++|+++ +.+|..|.||||+|+..|+.+++++|+++|+++ ...|..|.||
T Consensus 79 ~~g~~~~v~~Ll~~gadv------------------n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~Tp 139 (169)
T 4gpm_A 79 ENGHKEVVKLLISKGADV------------------NAKDSDGRTPLHHAAENGHKEVVKLLISKGADV-NTSDSDGRTP 139 (169)
T ss_dssp HTTCHHHHHHHHHTTCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCH
T ss_pred HcCCHHHHHHHHHCcCCC------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCH
Confidence 999999999999999984 677889999999999999999999999999985 4788999999
Q ss_pred HHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCcc
Q 015738 162 LYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSH 202 (401)
Q Consensus 162 l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~ 202 (401)
|++|+. .++.+++++|+++|++++.
T Consensus 140 L~~A~~----------------~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 140 LDLARE----------------HGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp HHHHHH----------------TTCHHHHHHHHTC------
T ss_pred HHHHHH----------------cCCHHHHHHHHHCCCCcCC
Confidence 999998 3489999999999999864
No 50
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=2e-33 Score=235.87 Aligned_cols=161 Identities=21% Similarity=0.269 Sum_probs=123.1
Q ss_pred HHHHhhcCCCeeEEeecchhhhhchHHHHHHHHhhCChhhh----cccCCCCcHHHHHHHc---CCHHHHHHHHHhhhhh
Q 015738 27 RLLTAKAKNTILHINIISSERENVSTKFVEEILEKCPALLL----QVNAKGDTPLHLAAKF---GHFEIVRVLIERAKLA 99 (401)
Q Consensus 27 ~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~~ 99 (401)
....+..|.|+||+| +..|+.++++.|++.....+.+++ ..+..|.||||+||.. |+.++|++|+++|++.
T Consensus 6 ~~~~d~~g~t~L~~A--~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~ 83 (273)
T 2pnn_A 6 EKPPRLYDRRSIFDA--VAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKT 83 (273)
T ss_dssp -----CCCHHHHHHH--HHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHT
T ss_pred CCCCCcccchHHHHH--HHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccc
Confidence 344566799999999 999999999999987666676665 4588999999999987 9999999999999874
Q ss_pred ccCCCCCCCCchhhHHHhH----hccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC--------------CCCCH
Q 015738 100 QRGDEEPESGVEPFRQMIR----MVNNEKNTALHEAVSQGNVDVVKILTREDPGYPYSANN--------------YGKTP 161 (401)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~----~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~--------------~~~t~ 161 (401)
.. ....++ ..|..|.||||+|+..|+.+++++|+++|+++. ..+. .|.||
T Consensus 84 ~~-----------~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~~~~~~~~~~~~g~tp 151 (273)
T 2pnn_A 84 DS-----------LKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQ-AAANGDFFKKTKGRPGFYFGELP 151 (273)
T ss_dssp TC-----------HHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCBCSGGGSSCSSSCCCCSCBSH
T ss_pred cc-----------hhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC-ccccccccccccccccccCCCCH
Confidence 21 111122 256789999999999999999999999998865 4443 57777
Q ss_pred HHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHh---cCCCCccCCCCCCcHHhHHHhh
Q 015738 162 LYMAAEYENRSDMLRGLLENRTSASFDMVLALLE---NSTSVSHEGPNGKTALHAAAMR 217 (401)
Q Consensus 162 l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~---~~~~~~~~~~~~~t~l~~a~~~ 217 (401)
||+|+. .++.+++++|++ .|++++..+..|.||||+|+..
T Consensus 152 L~~A~~----------------~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~ 194 (273)
T 2pnn_A 152 LSLAAC----------------TNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEV 194 (273)
T ss_dssp HHHHHH----------------TTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHH----------------cCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHc
Confidence 777776 336777777777 7777777777777777777765
No 51
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=2.9e-32 Score=218.10 Aligned_cols=179 Identities=17% Similarity=0.181 Sum_probs=164.8
Q ss_pred CCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHH
Q 015738 205 PNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHL 284 (401)
Q Consensus 205 ~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~ 284 (401)
..+.|||+.|+.. ++.+.+..++..++.+++..+..|.||||+|+..|+.+++++|++.|+++ +..+. .|.||||.
T Consensus 3 ~~~~~~L~~A~~~--g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~l~~ 78 (201)
T 3hra_A 3 TYEVGALLEAANQ--RDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNS-ISDSPYLY 78 (201)
T ss_dssp CCCTTHHHHHHHT--TCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHH
T ss_pred cccccHHHHHHHh--ccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCC-CCCCHHHH
Confidence 4578999999999 89999999999988778999999999999999999999999999999887 33443 78999999
Q ss_pred HHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccc-cccccCCCCCCcHHHHHHHhCC--
Q 015738 285 AAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLAR-SLIDEGDAEGNTPLHVLAAVRP-- 361 (401)
Q Consensus 285 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~-~~~~~~~~~g~t~L~~A~~~~~-- 361 (401)
|+..|+.+++++|++.+...++.++..|.||||+|+..++.+++++|++ .| ++++.+|..|.||||+|+..++
T Consensus 79 A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~~g~t~L~~A~~~~~~~ 154 (201)
T 3hra_A 79 AGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLE----DGREDIDFQNDFGYTALIEAVGLREGN 154 (201)
T ss_dssp HHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHH----HCCCCTTCCCTTSCCHHHHHHHSSCCS
T ss_pred HHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHH----cCCCCcCCCCCCCCCHHHHHHHhccch
Confidence 9999999999999977776688999999999999999999999999999 66 8999999999999999999998
Q ss_pred ---hhHHHHHHhhcCCChhhhhccCcceeeeeec
Q 015738 362 ---KEFHDVMNRSTQANYDAVNKQNVSVRHVFNY 392 (401)
Q Consensus 362 ---~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 392 (401)
.+++++|++. |++++.+|..|.||+++|.+
T Consensus 155 ~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~ 187 (201)
T 3hra_A 155 QLYQDIVKLLMEN-GADQSIKDNSGRTAMDYANQ 187 (201)
T ss_dssp HHHHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHH
T ss_pred hhHHHHHHHHHHC-CCCCCccCCCCCCHHHHHHH
Confidence 8999999976 99999999999999999943
No 52
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.5e-32 Score=211.08 Aligned_cols=160 Identities=25% Similarity=0.319 Sum_probs=141.2
Q ss_pred cHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhc
Q 015738 209 TALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGK 288 (401)
Q Consensus 209 t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~ 288 (401)
++|+.|+.. ++.+.++.|++.+. +++..|..|.||||+|+..++.+++++|++.|+++ +..+. .|.||||+|+..
T Consensus 6 ~~L~~Aa~~--G~~~~v~~Ll~~Ga-dvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~-~g~TpLh~A~~~ 80 (169)
T 4gpm_A 6 KRLIEAAEN--GNKDRVKDLIENGA-DVNASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDS-DGRTPLHHAAEN 80 (169)
T ss_dssp HHHHHHHHT--TCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHT
T ss_pred HHHHHHHHc--CCHHHHHHHHHCCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhcc-CCCCHHHHHHHc
Confidence 468899988 89999999998764 48899999999999999999999999999999987 44444 799999999999
Q ss_pred CCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHH
Q 015738 289 GDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVM 368 (401)
Q Consensus 289 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~L 368 (401)
|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..|+.+++++|
T Consensus 81 g~~~~v~~Ll~~gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~----~gad~~~~d~~G~TpL~~A~~~g~~~iv~~L 155 (169)
T 4gpm_A 81 GHKEVVKLLISKGAD-VNAKDSDGRTPLHHAAENGHKEVVKLLIS----KGADVNTSDSDGRTPLDLAREHGNEEVVKLL 155 (169)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCHHHHHHHHHCcCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 999999999999988 78999999999999999999999999999 8999999999999999999999999999999
Q ss_pred HhhcCCChhhh
Q 015738 369 NRSTQANYDAV 379 (401)
Q Consensus 369 l~~~~~~~~~~ 379 (401)
++. ||+++..
T Consensus 156 l~~-GA~ie~~ 165 (169)
T 4gpm_A 156 EKQ-GGWLEHH 165 (169)
T ss_dssp HTC--------
T ss_pred HHC-CCCcCCC
Confidence 966 9998753
No 53
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.98 E-value=1.1e-31 Score=223.62 Aligned_cols=201 Identities=20% Similarity=0.204 Sum_probs=169.3
Q ss_pred CCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHH----HHHHHHhcCCCCccCC----CCCCcHHhHHHhh-cccccchH
Q 015738 155 NNYGKTPLYMAAEYENRSDMLRGLLENRTSASFD----MVLALLENSTSVSHEG----PNGKTALHAAAMR-SFAVDTAL 225 (401)
Q Consensus 155 ~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~----~~~~Ll~~~~~~~~~~----~~~~t~l~~a~~~-~~~~~~~~ 225 (401)
+..++++|+.|+..+ +.+ +++++++.|++++..+ ..|.||||+|+.. ..++.+.+
T Consensus 2 ~~~~~~~L~~A~~~g----------------~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v 65 (260)
T 3jxi_A 2 KVFNRPILFDIVSRG----------------SPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTI 65 (260)
T ss_dssp CCCCHHHHHHHHHHT----------------CGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHH
T ss_pred ccchHHHHHHHHHhC----------------CHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHH
Confidence 456889999999844 555 5666667999998765 6799999999932 22889999
Q ss_pred HHHHHhhcc----------cccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccC------------CCCchHHH
Q 015738 226 PKLLEKKKN----------LIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADK------------DRKMTALH 283 (401)
Q Consensus 226 ~~ll~~~~~----------~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~------------~~g~t~L~ 283 (401)
+.|+..+.. .+...+..|.||||+|+..|+.+++++|++.|+++...... ..|.||||
T Consensus 66 ~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~ 145 (260)
T 3jxi_A 66 PILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLS 145 (260)
T ss_dssp HHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHH
T ss_pred HHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHH
Confidence 999987643 23444558999999999999999999999999988433321 37999999
Q ss_pred HHHhcCCHHHHHHhhh---cCCCCccccCCCCCcHHHHHHHhCC---------hhHHHHHHhcCCcccccc-------cc
Q 015738 284 LAAGKGDARTVERIIS---GNPKCYELVDNRGCNFLHYAMVSFH---------VGQLRNLLENNPLARSLI-------DE 344 (401)
Q Consensus 284 ~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~g~t~l~~A~~~~~---------~~~~~~Ll~~~~~~~~~~-------~~ 344 (401)
+|+..|+.+++++|++ .|.+ ++.+|..|+||||+|+..++ .+++++|++ .|+++ +.
T Consensus 146 ~A~~~g~~~~v~~Ll~~~~~ga~-~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~----~ga~~~~~~~~~~~ 220 (260)
T 3jxi_A 146 LAACTNQPHIVHYLTENGHKQAD-LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLI----KCAKLFPDTNLEAL 220 (260)
T ss_dssp HHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHH----HHHHHCTTCCGGGC
T ss_pred HHHHcCCHHHHHHHHhccccCCC-CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHH----hCcccccccchhhc
Confidence 9999999999999999 7777 78999999999999999887 799999999 89999 77
Q ss_pred CCCCCCcHHHHHHHhCChhHHHHHHhhcCCChh
Q 015738 345 GDAEGNTPLHVLAAVRPKEFHDVMNRSTQANYD 377 (401)
Q Consensus 345 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~ 377 (401)
+|..|.||||+|+..|+.+++++|+++ |++..
T Consensus 221 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~-g~~~~ 252 (260)
T 3jxi_A 221 LNNDGLSPLMMAAKTGKIGIFQHIIRR-EIADA 252 (260)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHH-HHHHH
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHh-CCCcc
Confidence 999999999999999999999999977 65544
No 54
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.98 E-value=1.4e-32 Score=229.09 Aligned_cols=210 Identities=20% Similarity=0.201 Sum_probs=164.6
Q ss_pred cCCCeeEEeecchhhhhchHHHHHHHHhhCChhhhccc----CCCCcHHHHHH---HcCCHHHHHHHHHhhhhhccCCCC
Q 015738 33 AKNTILHINIISSERENVSTKFVEEILEKCPALLLQVN----AKGDTPLHLAA---KFGHFEIVRVLIERAKLAQRGDEE 105 (401)
Q Consensus 33 ~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~g~t~L~~A~---~~~~~~~v~~Ll~~~~~~~~~~~~ 105 (401)
.|.++||.| ++.|+.+.++.|++.+...+.+++..+ ..|.||||+|+ ..|+.++|++|++.|++......
T Consensus 4 ~~~~~L~~A--~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~- 80 (260)
T 3jxi_A 4 FNRPILFDI--VSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMRE- 80 (260)
T ss_dssp CCHHHHHHH--HHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHH-
T ss_pred chHHHHHHH--HHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHh-
Confidence 478889999 999999988888887777788777665 77999999999 77999999999999987421100
Q ss_pred CCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCC--------------CCCCCHHHHHHhcCCc
Q 015738 106 PESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYPYSAN--------------NYGKTPLYMAAEYENR 171 (401)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~--------------~~~~t~l~~a~~~~~~ 171 (401)
.....+...|..|.||||+|+..|+.+++++|+++|+++. ..+ ..|.||||+|+.
T Consensus 81 ------~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~---- 149 (260)
T 3jxi_A 81 ------FINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVH-AQARGRFFQPKDEGGYFYFGELPLSLAAC---- 149 (260)
T ss_dssp ------HHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCEECCCSSSCCCCSCCSCSSHHHHHHH----
T ss_pred ------hhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcC-ccccccccCcccccccccCCCCHHHHHHH----
Confidence 0001123445589999999999999999999999999865 444 579999999998
Q ss_pred hhHHHhhhhhccCCCHHHHHHHHh---cCCCCccCCCCCCcHHhHHHhhcccc-------cchHHHHHHhhcccc-----
Q 015738 172 SDMLRGLLENRTSASFDMVLALLE---NSTSVSHEGPNGKTALHAAAMRSFAV-------DTALPKLLEKKKNLI----- 236 (401)
Q Consensus 172 ~~~~~~l~~~~~~~~~~~~~~Ll~---~~~~~~~~~~~~~t~l~~a~~~~~~~-------~~~~~~ll~~~~~~~----- 236 (401)
.++.+++++|++ .|++++..+..|.||||+|+..+.+. .++++.|+..+.. +
T Consensus 150 ------------~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~-~~~~~~ 216 (260)
T 3jxi_A 150 ------------TNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAK-LFPDTN 216 (260)
T ss_dssp ------------TTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHH-HCTTCC
T ss_pred ------------cCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcc-cccccc
Confidence 348999999999 89999999999999999999762111 3566666665544 4
Q ss_pred --cccccCCCcHHHHHHHcCCHHHHHHHHhcCccc
Q 015738 237 --KETDQYGWTPIHYAAYYGNYRTVNLLLETDQSA 269 (401)
Q Consensus 237 --~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~ 269 (401)
+..+..|.||||+|+..|+.+++++|+++|+..
T Consensus 217 ~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 217 LEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIAD 251 (260)
T ss_dssp GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCc
Confidence 567778888888888888888888888877665
No 55
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=4.7e-31 Score=205.37 Aligned_cols=170 Identities=24% Similarity=0.330 Sum_probs=151.7
Q ss_pred CCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHH
Q 015738 207 GKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAA 286 (401)
Q Consensus 207 ~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~ 286 (401)
+.+|||.|+.. ++.+.+++++..+...++..+..|.||||+|+..|+.+++++|++.|+++ +..+. .|.||||+|+
T Consensus 2 ~~~~L~~A~~~--g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~ 77 (172)
T 3v30_A 2 DSLSIHQLAAQ--GELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILAK-ERESALSLAS 77 (172)
T ss_dssp --CCHHHHHHT--TCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCT-TCCCHHHHHH
T ss_pred chhhHHHHHHc--CCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcc-cCCCHHHHHH
Confidence 46899999999 99999999999988888999999999999999999999999999999887 33443 7899999999
Q ss_pred hcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHH
Q 015738 287 GKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHD 366 (401)
Q Consensus 287 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~ 366 (401)
..++.+++++|++++.+ ++.+|..|+||||+|+..++.+++++|++ .|++++.+|..|.||||+|+..++.++++
T Consensus 78 ~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~t~l~~A~~~~~~~~~~ 152 (172)
T 3v30_A 78 TGGYTDIVGLLLERDVD-INIYDWNGGTPLLYAVRGNHVKCVEALLA----RGADLTTEADSGYTPMDLAVALGYRKVQQ 152 (172)
T ss_dssp HTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCccccCCCCCCHHHHHHHhCcHHHHH
Confidence 99999999999999988 68899999999999999999999999999 89999999999999999999999999999
Q ss_pred HHHhhcCCChhhhhccCcce
Q 015738 367 VMNRSTQANYDAVNKQNVSV 386 (401)
Q Consensus 367 ~Ll~~~~~~~~~~~~~g~t~ 386 (401)
+|++. |+++..++..|.||
T Consensus 153 ~L~~~-~~~~~~~~~~~~~p 171 (172)
T 3v30_A 153 VIENH-ILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHH-HHHHSCC-------
T ss_pred HHHHH-HHHHhcccCCCCCC
Confidence 99976 99999999999987
No 56
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.97 E-value=4.1e-34 Score=247.31 Aligned_cols=260 Identities=13% Similarity=0.068 Sum_probs=165.5
Q ss_pred hhhhchHHHHHHHHhhCChhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCC
Q 015738 46 ERENVSTKFVEEILEKCPALLLQVNAKGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKN 125 (401)
Q Consensus 46 ~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 125 (401)
.+..+.++++.+ .+.++.||||+||..|+.++|++|+++|+.... ....+..|.
T Consensus 76 ~~~~~~~~~l~~-----------~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~---------------~~~~~~~~~ 129 (376)
T 2aja_A 76 RNAKQLWSDAHK-----------KGIKSEVICFVAAITGCSSALDTLCLLLTSDEI---------------VKVIQAENY 129 (376)
T ss_dssp TTCTTHHHHHHH-----------HTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSS---------------CC--CHHHH
T ss_pred CCCHHHHHHHHH-----------cCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHH---------------HHHhccCCC
Confidence 355556666554 344556888888888888888888888772110 012234567
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCC--CCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCcc-
Q 015738 126 TALHEAVSQGNVDVVKILTREDPGYP--YSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSH- 202 (401)
Q Consensus 126 t~L~~A~~~~~~~~~~~Ll~~~~~~~--~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~- 202 (401)
||||+|+..|+.+++++|+++|++.. ...+.. .||||+|+. .++.+++++|+++|++++.
T Consensus 130 tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~----------------~G~~eiv~~Ll~~ga~~~~~ 192 (376)
T 2aja_A 130 QAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAE----------------NGHLHVLNRLCELAPTEATA 192 (376)
T ss_dssp HHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHH----------------TTCHHHHHHHHHSCGGGHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHH----------------CCCHHHHHHHHHcCCccchh
Confidence 78888888888888888888886421 111222 788888887 3478888888888888766
Q ss_pred -CCCCCCcHHhHHH-hhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCch
Q 015738 203 -EGPNGKTALHAAA-MRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMT 280 (401)
Q Consensus 203 -~~~~~~t~l~~a~-~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t 280 (401)
.+..|.||||+|+ .. ++.+++++|+..+.. +.|||++|+..|+.+++++|++.|++.. .. .+
T Consensus 193 ~~d~~g~TpL~~Aa~~~--G~~eiv~~Ll~~ga~--------~~taL~~Aa~~g~~evv~lL~~~ga~~~-~~-----~~ 256 (376)
T 2aja_A 193 MIQAENYYAFRWAAVGR--GHHNVINFLLDCPVM--------LAYAEIHEFEYGEKYVNPFIARHVNRLK-EM-----HD 256 (376)
T ss_dssp HHHHHHHHHHHHHHSTT--CCHHHHHHHTTSHHH--------HHHHHHCTTTTTTTTHHHHHHHHHHHHH-HH-----HT
T ss_pred ccCCCCCCHHHHHHHHC--CCHHHHHHHHhCCCc--------cchHHHHHHHCCCHHHHHHHHhcCcccc-cc-----cH
Confidence 6677788888888 77 778888888774421 6788888888888888888888776552 11 13
Q ss_pred HHHHHHhcCCHHH------------HHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCC-----ccccccc
Q 015738 281 ALHLAAGKGDART------------VERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNP-----LARSLID 343 (401)
Q Consensus 281 ~L~~a~~~~~~~~------------~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~-----~~~~~~~ 343 (401)
+++.|+..|+.++ ++.|+.++. .+..+.+++|++... ..|+++
T Consensus 257 ~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~-------------------~~~~~~~~~Ll~~~~vk~l~~~g~~~- 316 (376)
T 2aja_A 257 AFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRND-------------------EVLLDDIRFLLSIPGIKALAPTATIP- 316 (376)
T ss_dssp TTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCC-------------------GGGHHHHHHHHTSTTTGGGSSCCSST-
T ss_pred HHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcch-------------------hhHHHHHHHHHhChhhhhhhccCCCC-
Confidence 5556666665442 233333321 112445566665211 123333
Q ss_pred cCCCCCCcHHHHHHHhCChhHHHHHHhhcCCChhhhhccCcceeeeee
Q 015738 344 EGDAEGNTPLHVLAAVRPKEFHDVMNRSTQANYDAVNKQNVSVRHVFN 391 (401)
Q Consensus 344 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~ 391 (401)
..+.||||+|+..|+.+++++|+.. ..+++..|+|++++|.
T Consensus 317 ---n~~~~~L~~A~~~g~~e~v~lLl~~----~~v~~~~~~~~~~~~~ 357 (376)
T 2aja_A 317 ---GDANELLRLALRLGNQGACALLLSI----PSVLALTKANNYYINE 357 (376)
T ss_dssp ---TCCCHHHHHHHHHTCTTHHHHHTTS----HHHHHSCC--------
T ss_pred ---CCccHHHHHHHHcCcHHHHHHHHcC----hHHHHHHHHhcccccc
Confidence 3566899999999999999999854 3778889999998883
No 57
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=1.1e-30 Score=218.66 Aligned_cols=181 Identities=22% Similarity=0.232 Sum_probs=162.5
Q ss_pred CHHHHHHHHhcCCC--CccCCCCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHH-----HcCCHHH
Q 015738 186 SFDMVLALLENSTS--VSHEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAA-----YYGNYRT 258 (401)
Q Consensus 186 ~~~~~~~Ll~~~~~--~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~-----~~~~~~~ 258 (401)
..+.++.++..+.+ ++..|..|.||||+|+.. ++.+.++.|+..+..+++..+..|.||||+|+ ..++.++
T Consensus 88 ~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~--g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~ 165 (276)
T 4hbd_A 88 HLVTFRAMSARLLDYVVNIADSNGNTALHYSVSH--ANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIET 165 (276)
T ss_dssp HHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHT--TCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHC--CCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHH
Confidence 77888888887766 788999999999999998 89999999999988678999999999999999 6688999
Q ss_pred HHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCcc
Q 015738 259 VNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLA 338 (401)
Q Consensus 259 ~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~ 338 (401)
+++|++.|... ...+ ..|.||||+|+..|+.+++++|++.|++ ++.+|..|+||||+|+..|+.+++++|++. .
T Consensus 166 v~~Ll~~g~~~-~~~~-~~g~tpLh~A~~~g~~~~v~~Ll~~gad-~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~---~ 239 (276)
T 4hbd_A 166 VLQLFRLGNIN-AKAS-QAGQTALMLAVSHGRVDVVKALLACEAD-VNVQDDDGSTALMCACEHGHKEIAGLLLAV---P 239 (276)
T ss_dssp HHHHHHHSCTT-CCCT-TTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHTS---T
T ss_pred HHHHHHcCCCc-cccC-CCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHhc---C
Confidence 99999999665 3333 3789999999999999999999999988 788999999999999999999999999983 5
Q ss_pred ccccccCCCCCCcHHHHHHHhCChhHHHHHHhhcCC
Q 015738 339 RSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRSTQA 374 (401)
Q Consensus 339 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~ 374 (401)
|++++.+|..|.||||+|+..|+.+++++|+++.+.
T Consensus 240 gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~i 275 (276)
T 4hbd_A 240 SCDISLTDRDGSTALMVALDAGQSEIASMLYSRMNI 275 (276)
T ss_dssp TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCCC
T ss_pred CCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccCC
Confidence 899999999999999999999999999999988654
No 58
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=1.6e-30 Score=217.71 Aligned_cols=199 Identities=23% Similarity=0.232 Sum_probs=137.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCC
Q 015738 72 KGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYP 151 (401)
Q Consensus 72 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~ 151 (401)
.+.+++|.|+..|+.+.++.+++.+.+. .++..|..|.||||+|+..|+.+++++|++.|+...
T Consensus 75 ~~~~~l~~a~~~~~~~~~~~l~~~~~~~----------------~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~ 138 (276)
T 4hbd_A 75 ACRSDAHPELVRRHLVTFRAMSARLLDY----------------VVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKV 138 (276)
T ss_dssp HHSTTCCHHHHHHHHHHHHHHCHHHHHH----------------HHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCT
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHHHhh----------------cCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcC
Confidence 3456777777777777777777766542 145667777777777777777777777777777445
Q ss_pred CCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccchHHHHHHh
Q 015738 152 YSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLLEK 231 (401)
Q Consensus 152 ~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~ 231 (401)
...+..|.||+++|+.... ...+..++++.|++.|.+++..+..|.||||+|+.. ++.+.++.|+..
T Consensus 139 ~~~~~~g~tpL~~a~~~~~-----------~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~--g~~~~v~~Ll~~ 205 (276)
T 4hbd_A 139 DKQNRAGYSPIMLTALATL-----------KTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSH--GRVDVVKALLAC 205 (276)
T ss_dssp TCCCTTSCCHHHHGGGCCC-----------CSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHT--TCHHHHHHHHHT
T ss_pred CCCCCCCCCHHHHHHHHHh-----------hhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHc--CCHHHHHHHHhC
Confidence 5667777777777774211 112366777777777777777777777777777777 667777777766
Q ss_pred hcccccccccCCCcHHHHHHHcCCHHHHHHHHh-cCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCC
Q 015738 232 KKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLE-TDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNP 302 (401)
Q Consensus 232 ~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~ 302 (401)
+. +++..|..|.||||+|+..|+.+++++|++ .|+++ +..+. .|.||||+|+..|+.+++++|+++..
T Consensus 206 ga-d~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~-~~~d~-~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 206 EA-DVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDI-SLTDR-DGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp TC-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCT-TCCCT-TSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred CC-CCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCC-cCcCC-CCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 44 366777777777777777777788887777 66665 33333 67778888887788888877777653
No 59
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=1.7e-29 Score=200.26 Aligned_cols=162 Identities=19% Similarity=0.131 Sum_probs=148.4
Q ss_pred CccCCCCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCc
Q 015738 200 VSHEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKM 279 (401)
Q Consensus 200 ~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~ 279 (401)
++..+..|.||||+|+.. ++.+.+++|++.+. +++..+..|.||||+|+..|+.+++++|++.|+++ +..+. .|.
T Consensus 28 ~n~~d~~g~t~L~~A~~~--g~~~~v~~Ll~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~ 102 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACML--GMENAIDKLVENFD-KLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDF-SGK 102 (192)
T ss_dssp HTCCCTTCCCHHHHHHHH--TCGGGHHHHHHHHC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCT-TSC
T ss_pred HhCcCCCCCCHHHHHHHc--CCHHHHHHHHHhcc-ccccccccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCC-CCC
Confidence 466788999999999999 89999999998765 47888899999999999999999999999999887 33443 789
Q ss_pred hHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHh
Q 015738 280 TALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAV 359 (401)
Q Consensus 280 t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~ 359 (401)
||||.|+..++.+++++|++.+++ ++.+|..|.||||+|+..++.+++++|++ .|++++.+|..|.||||+|+..
T Consensus 103 t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~t~l~~A~~~ 177 (192)
T 2rfm_A 103 TPLMWSIIFGYSEMSYFLLEHGAN-VNDRNLEGETPLIVASKYGRSEIVKKLLE----LGADISARDLTGLTAEASARIF 177 (192)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHH----TTCCTTCBCTTSCBHHHHHHHT
T ss_pred cHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHH----CCCCCCCcCCCCCCHHHHHHHh
Confidence 999999999999999999999988 68899999999999999999999999999 7999999999999999999999
Q ss_pred CChhHHHHHHhh
Q 015738 360 RPKEFHDVMNRS 371 (401)
Q Consensus 360 ~~~~~~~~Ll~~ 371 (401)
++.+++++|++.
T Consensus 178 ~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 178 GRQEVIKIFTEV 189 (192)
T ss_dssp TCHHHHHHHHHH
T ss_pred CcHHHHHHHHhc
Confidence 999999999976
No 60
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.97 E-value=3.3e-33 Score=241.62 Aligned_cols=281 Identities=14% Similarity=0.087 Sum_probs=190.4
Q ss_pred hhhhhhh-cCCCCchhhhhhHHHHHHHHhhcCCCeeEEeecchhhhhchHHHHHHHHhhCCh---hhhcccCCCCcHHHH
Q 015738 4 NFFKAAS-AGNSEPFKDMERDVIERLLTAKAKNTILHINIISSERENVSTKFVEEILEKCPA---LLLQVNAKGDTPLHL 79 (401)
Q Consensus 4 ~l~~A~~-~g~~~~~~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~g~t~L~~ 79 (401)
.++.|.. .++.+.++++++.|.+ +.||||+| +..|+.+++++|++ .+. .....+..|.||||+
T Consensus 68 ~~~~a~~~~~~~~~~~~l~~~g~~-------~~T~Lh~A--a~~G~~e~v~~Ll~----~ga~~~~~~~~~~~~~tpL~~ 134 (376)
T 2aja_A 68 CLYYAHYNRNAKQLWSDAHKKGIK-------SEVICFVA--AITGCSSALDTLCL----LLTSDEIVKVIQAENYQAFRL 134 (376)
T ss_dssp HHHHHHTTTTCTTHHHHHHHHTCC-------HHHHHHHH--HHHCCHHHHHHHTT----C--CCSSCC--CHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHcCCC-------cCCHHHHH--HHcCCHHHHHHHHH----cCCcHHHHHHhccCCCCHHHH
Confidence 4556655 5788888888877653 56999999 99999999999988 444 112345567899999
Q ss_pred HHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCC-CCCCCC
Q 015738 80 AAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYPY-SANNYG 158 (401)
Q Consensus 80 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~-~~~~~~ 158 (401)
||..|+.++|++|+++|++... ..++..+ .||||+|+..|+.+++++|+++|++... ..+..|
T Consensus 135 Aa~~G~~eiv~~Ll~~gad~~~-------------~~i~~~~---~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g 198 (376)
T 2aja_A 135 AAENGHLHVLNRLCELAPTEIM-------------AMIQAEN---YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAEN 198 (376)
T ss_dssp HHHTTCHHHHHHHHHSCTTTHH-------------HHHSHHH---HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCccc-------------cccCCCC---CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCC
Confidence 9999999999999999974200 0022222 8999999999999999999999987432 266779
Q ss_pred CCHHHHHH-hcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccchHHHHHHhhccccc
Q 015738 159 KTPLYMAA-EYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIK 237 (401)
Q Consensus 159 ~t~l~~a~-~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~ 237 (401)
.||||+|+ . .++.+++++|++.|++ +.||+++|+.. ++.+.+++|++.+.. ++
T Consensus 199 ~TpL~~Aa~~----------------~G~~eiv~~Ll~~ga~-------~~taL~~Aa~~--g~~evv~lL~~~ga~-~~ 252 (376)
T 2aja_A 199 YYAFRWAAVG----------------RGHHNVINFLLDCPVM-------LAYAEIHEFEY--GEKYVNPFIARHVNR-LK 252 (376)
T ss_dssp HHHHHHHHST----------------TCCHHHHHHHTTSHHH-------HHHHHHCTTTT--TTTTHHHHHHHHHHH-HH
T ss_pred CCHHHHHHHH----------------CCCHHHHHHHHhCCCc-------cchHHHHHHHC--CCHHHHHHHHhcCcc-cc
Confidence 99999999 8 4489999999997753 89999999998 888888888877654 44
Q ss_pred ccccCCCcHHHHHHHcCCHHHH------------HHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCC-
Q 015738 238 ETDQYGWTPIHYAAYYGNYRTV------------NLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKC- 304 (401)
Q Consensus 238 ~~~~~~~t~L~~a~~~~~~~~~------------~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~- 304 (401)
..+ ++++.|+..|+.+++ +.|+..+ ..+..+.+++|++.+...
T Consensus 253 ~~~----~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~--------------------~~~~~~~~~~Ll~~~~vk~ 308 (376)
T 2aja_A 253 EMH----DAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRN--------------------DEVLLDDIRFLLSIPGIKA 308 (376)
T ss_dssp HHH----TTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHC--------------------CGGGHHHHHHHHTSTTTGG
T ss_pred ccc----HHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcc--------------------hhhHHHHHHHHHhChhhhh
Confidence 333 367778888876643 3344332 112355667776543210
Q ss_pred ---ccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHHh
Q 015738 305 ---YELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNR 370 (401)
Q Consensus 305 ---~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 370 (401)
.......+.||||+|+..|+.+++++|++ .+ ..++..|+|++.+|...|..++.+.-+.
T Consensus 309 l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~----~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (376)
T 2aja_A 309 LAPTATIPGDANELLRLALRLGNQGACALLLS----IP---SVLALTKANNYYINETGGRLDLRAVALE 370 (376)
T ss_dssp GSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTT----SH---HHHHSCC---------------------
T ss_pred hhccCCCCCCccHHHHHHHHcCcHHHHHHHHc----Ch---HHHHHHHHhccccccccccccHHHHHHH
Confidence 01123457789999999999999999998 43 5678899999999999999998875543
No 61
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=3.7e-31 Score=203.96 Aligned_cols=158 Identities=19% Similarity=0.172 Sum_probs=145.5
Q ss_pred CchhhhhhhhcCCCCchhhhhhHHHHHHHHhhcCCCeeEEeecchhhhhchHHHHHHHHhhCChhhhcccCCCCcHHHHH
Q 015738 1 MDLNFFKAASAGNSEPFKDMERDVIERLLTAKAKNTILHINIISSERENVSTKFVEEILEKCPALLLQVNAKGDTPLHLA 80 (401)
Q Consensus 1 ~~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A 80 (401)
.+++|+.|+..|+.+++++|++.|++....+..|.||||+| +. |+.+++++|++ .|.+++.++..|.||||+|
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A--~~-~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A 77 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVM--KL-GNPEIARRLLL----RGANPDLKDRTGFAVIHDA 77 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHC--CS-SCHHHHHHHHH----TTCCTTCCCTTSCCHHHHH
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHH--Hc-CcHHHHHHHHH----cCCCCCCCCCCCCCHHHHH
Confidence 36899999999999999999999888888888899999999 88 99999999999 7899999999999999999
Q ss_pred HHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCC
Q 015738 81 AKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYPYSANNYGKT 160 (401)
Q Consensus 81 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t 160 (401)
+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|++++++.....+..|.|
T Consensus 78 ~~~~~~~~v~~Ll~~g~~~------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t 139 (162)
T 1ihb_A 78 ARAGFLDTLQTLLEFQADV------------------NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDT 139 (162)
T ss_dssp HHHTCHHHHHHHHHTTCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCC
T ss_pred HHcCCHHHHHHHHHcCCCC------------------CCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCc
Confidence 9999999999999999884 6778899999999999999999999999999876788999999
Q ss_pred HHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCC
Q 015738 161 PLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTS 199 (401)
Q Consensus 161 ~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~ 199 (401)
|+++|+. .++.+++++|+++|++
T Consensus 140 ~l~~A~~----------------~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 140 ACDLARL----------------YGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHHH----------------TTCHHHHHHHHHTC--
T ss_pred HHHHHHH----------------cCCHHHHHHHHHhCCC
Confidence 9999998 3489999999999975
No 62
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=1.4e-29 Score=200.76 Aligned_cols=164 Identities=24% Similarity=0.249 Sum_probs=134.0
Q ss_pred hhhcccCCCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHH
Q 015738 65 LLLQVNAKGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILT 144 (401)
Q Consensus 65 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 144 (401)
.++.+|..|.||||+||..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|+
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll 88 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKL------------------EDKDIEGSTALIWAVKNNRLGIAEKLL 88 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccc------------------ccccccCccHHHHHHHcCCHHHHHHHH
Confidence 35678899999999999999999999999998874 566778999999999999999999999
Q ss_pred hcCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccch
Q 015738 145 REDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDTA 224 (401)
Q Consensus 145 ~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~ 224 (401)
++|+++ ...+..|.||||+|+. .++.+++++|++.|++++..+..|.||||+|+.. ++.+.
T Consensus 89 ~~g~~~-~~~~~~g~t~L~~A~~----------------~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~--~~~~~ 149 (192)
T 2rfm_A 89 SKGSNV-NTKDFSGKTPLMWSII----------------FGYSEMSYFLLEHGANVNDRNLEGETPLIVASKY--GRSEI 149 (192)
T ss_dssp HHTCCT-TCCCTTSCCHHHHHHH----------------HTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHH--TCHHH
T ss_pred HCCCCC-CCCCCCCCcHHHHHHH----------------cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc--CCHHH
Confidence 998884 4678889999999998 3388899999999998888888888888888777 66777
Q ss_pred HHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcC
Q 015738 225 LPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETD 266 (401)
Q Consensus 225 ~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~ 266 (401)
++.|++.+ .+++..+..|.|||++|+..|+.+++++|++.+
T Consensus 150 v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 150 VKKLLELG-ADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHCC-CCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 77777664 336667777777777777777777777777654
No 63
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=2.2e-29 Score=197.15 Aligned_cols=169 Identities=20% Similarity=0.305 Sum_probs=153.4
Q ss_pred CCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHH
Q 015738 205 PNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHL 284 (401)
Q Consensus 205 ~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~ 284 (401)
+.+.++|+.|+.. ++.+.++.++...+..++..+..|.||||+|+..|+.+++++|++.|+++ +..+. .|.||||+
T Consensus 3 ~~~~~~l~~A~~~--g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~ 78 (179)
T 3f6q_A 3 PEFMDDIFTQCRE--GNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNR-GDDTPLHL 78 (179)
T ss_dssp ----CCHHHHHHH--TCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TCCCHHHH
T ss_pred HHHHHHHHHHHHc--CCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCC-CCCCHHHH
Confidence 4578999999999 99999999999988889999999999999999999999999999999887 33443 78999999
Q ss_pred HHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhH
Q 015738 285 AAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEF 364 (401)
Q Consensus 285 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 364 (401)
|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..++.+++++|++ .|++++.+|..|.|||++|+..++.++
T Consensus 79 A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~tpl~~A~~~~~~~~ 153 (179)
T 3f6q_A 79 AASHGHRDIVQKLLQYKAD-INAVNEHGNVPLHYACFWGQDQVAEDLVA----NGALVSICNKYGEMPVDKAKAPLRELL 153 (179)
T ss_dssp HHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCSSBCCTTSCCGGGGSCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHH----CCCCcchhccCCCCcHHHHHHHHHHHH
Confidence 9999999999999999988 68899999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHhhcCCChhhhhccC
Q 015738 365 HDVMNRSTQANYDAVNKQN 383 (401)
Q Consensus 365 ~~~Ll~~~~~~~~~~~~~g 383 (401)
+++|++. |++++..+..+
T Consensus 154 ~~~L~~~-g~~~~~~~~~~ 171 (179)
T 3f6q_A 154 RERAEKM-GQNLNRIPYKD 171 (179)
T ss_dssp HHHHHHT-TCCCSCBCCCC
T ss_pred HHHHHHh-hcCcccCCccc
Confidence 9999866 99998776655
No 64
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=1.7e-28 Score=189.84 Aligned_cols=159 Identities=23% Similarity=0.306 Sum_probs=145.3
Q ss_pred CCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHH
Q 015738 206 NGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLA 285 (401)
Q Consensus 206 ~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a 285 (401)
.|.||||.|+.. ++.+.++++++.+. .++..+..|.||||+|+..|+.+++++|++.|+++ +..+ ..|.||||.|
T Consensus 2 ~~~t~L~~A~~~--g~~~~v~~ll~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A 76 (167)
T 3v31_A 2 ANSLSVHQLAAQ--GEMLYLATRIEQEN-VINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLG-KGRESALSLA 76 (167)
T ss_dssp TTCCCHHHHHHT--TCHHHHHHHHHHSS-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTCCCHHHHH
T ss_pred CCcchHHHHHHC--CCHHHHHHHHHcCC-CcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcC-CCCCcHHHHH
Confidence 478999999999 99999999998864 48889999999999999999999999999999887 3333 3788999999
Q ss_pred HhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHH
Q 015738 286 AGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFH 365 (401)
Q Consensus 286 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~ 365 (401)
+..++.+++++|++.+.+ ++.+|..|.||||+|+..++.+++++|++ .|++++.+|..|.||||+|+..|+.+++
T Consensus 77 ~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~l~~A~~~~~~~~~ 151 (167)
T 3v31_A 77 CSKGYTDIVKMLLDCGVD-VNEYDWNGGTPLLYAVHGNHVKCVKMLLE----SGADPTIETDSGYNSMDLAVALGYRSVQ 151 (167)
T ss_dssp HHHTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HHcCCHHHHHHHHHCCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHcCcHHHH
Confidence 999999999999999988 68899999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHhhcCCC
Q 015738 366 DVMNRSTQAN 375 (401)
Q Consensus 366 ~~Ll~~~~~~ 375 (401)
++|++. +++
T Consensus 152 ~~L~~~-~~~ 160 (167)
T 3v31_A 152 QVIESH-LLK 160 (167)
T ss_dssp HHHHHH-HHH
T ss_pred HHHHHH-HHH
Confidence 999976 443
No 65
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=5.2e-29 Score=191.84 Aligned_cols=158 Identities=22% Similarity=0.209 Sum_probs=105.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCC
Q 015738 72 KGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYP 151 (401)
Q Consensus 72 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~ 151 (401)
...||||.|+..|+.+++++|+++|+++ +..+..|.||||+|+. |+.+++++|+++|+++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~------------------~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~- 63 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNV------------------NAQNGFGRTALQVMKL-GNPEIARRLLLRGANP- 63 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCT------------------TCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCc------------------cccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-
Confidence 3457777777777777777777776653 4556677777777777 7777777777777663
Q ss_pred CCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccchHHHHHHh
Q 015738 152 YSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLLEK 231 (401)
Q Consensus 152 ~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~ 231 (401)
...+..|.||||+|+. .++.+++++|++.|++++..+..|.||||+|+.. ++.+.++.|++.
T Consensus 64 ~~~~~~g~t~L~~A~~----------------~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~ 125 (162)
T 1ihb_A 64 DLKDRTGFAVIHDAAR----------------AGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKE--GHLRVVEFLVKH 125 (162)
T ss_dssp TCCCTTSCCHHHHHHH----------------HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT--TCHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHH----------------cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc--CCHHHHHHHHHc
Confidence 3566677777777776 2267777777777777776666666666666665 556666666666
Q ss_pred hcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCc
Q 015738 232 KKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQ 267 (401)
Q Consensus 232 ~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~ 267 (401)
+...++..+..|.||||+|+..|+.+++++|+++|+
T Consensus 126 g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 126 TASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp SCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence 555455556666666666666666666666666654
No 66
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=9.6e-29 Score=191.28 Aligned_cols=159 Identities=20% Similarity=0.184 Sum_probs=85.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCC
Q 015738 72 KGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYP 151 (401)
Q Consensus 72 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~ 151 (401)
.|.||||.|+..|+.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|+++|+++
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~------------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~- 62 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENV------------------INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP- 62 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSC------------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCC------------------cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-
Confidence 345555555555555555555555544 2344445555555555555555555555555442
Q ss_pred CCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccchHHHHHHh
Q 015738 152 YSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLLEK 231 (401)
Q Consensus 152 ~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~ 231 (401)
...+..|.||||+|+. .++.+++++|++.|++++..+..|.||||+|+.. ++.+.++.|++.
T Consensus 63 ~~~~~~g~t~L~~A~~----------------~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~ 124 (167)
T 3v31_A 63 QLLGKGRESALSLACS----------------KGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHG--NHVKCVKMLLES 124 (167)
T ss_dssp TCCCTTCCCHHHHHHH----------------HTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHT--TCHHHHHHHHHT
T ss_pred CCcCCCCCcHHHHHHH----------------cCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHc--CCHHHHHHHHHc
Confidence 2344555555555555 1245555555555555555555555555555555 555555555543
Q ss_pred hcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCcc
Q 015738 232 KKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQS 268 (401)
Q Consensus 232 ~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~ 268 (401)
+. +++..+..|.|||++|+..|+.+++++|++++..
T Consensus 125 g~-~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 125 GA-DPTIETDSGYNSMDLAVALGYRSVQQVIESHLLK 160 (167)
T ss_dssp TC-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CC-CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHH
Confidence 32 2455555566666666666666666666655433
No 67
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=3.8e-28 Score=188.10 Aligned_cols=158 Identities=25% Similarity=0.366 Sum_probs=141.1
Q ss_pred CCCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHH
Q 015738 204 GPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALH 283 (401)
Q Consensus 204 ~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~ 283 (401)
...+.++++.|+.. ++.+.+++|++.+. +++..+..|.||||+|+..|+.+++++|++.|++. +..+. .|.||||
T Consensus 11 ~~~~~~~l~~A~~~--g~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~ 85 (169)
T 2y1l_E 11 GSDLGKKLLEAARA--GRDDEVRILMANGA-DVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDH-AGMTPLR 85 (169)
T ss_dssp --CHHHHHHHHHHH--TCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TSCCHHH
T ss_pred CCcccchHHHHHHc--CCHHHHHHHHHCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCC-CCCCHHH
Confidence 44577899999999 89999999998754 47888899999999999999999999999999886 33333 7899999
Q ss_pred HHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChh
Q 015738 284 LAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKE 363 (401)
Q Consensus 284 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 363 (401)
.|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..++.+++++|++ .|++++.+|..|.||||+|+..++.+
T Consensus 86 ~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~l~~A~~~~~~~ 160 (169)
T 2y1l_E 86 LAALFGHLEIVEVLLKNGAD-VNANDMEGHTPLHLAAMFGHLEIVEVLLK----NGADVNAQDKFGKTAFDISIDNGNED 160 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHhCCHH
Confidence 99999999999999999988 68899999999999999999999999999 79999999999999999999999999
Q ss_pred HHHHHHhh
Q 015738 364 FHDVMNRS 371 (401)
Q Consensus 364 ~~~~Ll~~ 371 (401)
++++|++.
T Consensus 161 ~~~~L~~~ 168 (169)
T 2y1l_E 161 LAEILQKL 168 (169)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHc
Confidence 99999854
No 68
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=5.2e-29 Score=192.39 Aligned_cols=154 Identities=21% Similarity=0.259 Sum_probs=73.9
Q ss_pred CCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHH
Q 015738 206 NGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLA 285 (401)
Q Consensus 206 ~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a 285 (401)
.+.+||+.|+.. ++.+.+++++...+......+..|.||||+|+..|+.+++++|++.|+++ +..+. .|.||||+|
T Consensus 7 ~~~~~l~~A~~~--g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A 82 (165)
T 3twr_A 7 EADRQLLEAAKA--GDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDK-GGLVPLHNA 82 (165)
T ss_dssp HHHHHHHHHHHH--TCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHH
T ss_pred hhhHHHHHHHHh--CCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCC-CCCCHHHHH
Confidence 344455555544 44455555544444444444444445555555555555555555544443 22222 344555555
Q ss_pred HhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHH
Q 015738 286 AGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFH 365 (401)
Q Consensus 286 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~ 365 (401)
+..++.+++++|++.+.+ ++.+|..|+||||+|+..++.+++++|++ .|++++.+|..|.||||+|.. ++.+++
T Consensus 83 ~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~t~l~~a~~-~~~~i~ 156 (165)
T 3twr_A 83 CSYGHYEVAELLVKHGAV-VNVADLWKFTPLHEAAAKGKYEICKLLLQ----HGADPTKKNRDGNTPLDLVKD-GDTDIQ 156 (165)
T ss_dssp HHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCTGGGSCT-TCHHHH
T ss_pred HHcCcHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCCcccCCCCCChhHhHhc-CChHHH
Confidence 555555555555554444 34444455555555555555555555554 444455555555555555433 444555
Q ss_pred HHHH
Q 015738 366 DVMN 369 (401)
Q Consensus 366 ~~Ll 369 (401)
++|+
T Consensus 157 ~~L~ 160 (165)
T 3twr_A 157 DLLR 160 (165)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 4444
No 69
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=7.6e-29 Score=191.47 Aligned_cols=150 Identities=23% Similarity=0.195 Sum_probs=135.8
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHH
Q 015738 240 DQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYA 319 (401)
Q Consensus 240 ~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A 319 (401)
+..+.|||+.|+..|+.++++.|++.+....... ...|.||||.|+..|+.+++++|++.+.+ ++.+|..|+||||+|
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A 82 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDI-EGRQSTPLHFAAGYNRVSVVEYLLQHGAD-VHAKDKGGLVPLHNA 82 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCT-TTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCcccc-ccCCCCHHHHHHHcChHHHHHHHHhcCCC-CCccCCCCCCHHHHH
Confidence 5567899999999999999999999765442333 34788999999999999999999999988 688999999999999
Q ss_pred HHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHHhhcCCChhhhhccCcceeeeeecccee
Q 015738 320 MVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRSTQANYDAVNKQNVSVRHVFNYGYTE 396 (401)
Q Consensus 320 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~ 396 (401)
+..++.+++++|++ .|++++.+|..|.||||+|+..++.+++++|++. |++++.+|..|.||+++|.++..+
T Consensus 83 ~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~a~~~~~~ 154 (165)
T 3twr_A 83 CSYGHYEVAELLVK----HGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQH-GADPTKKNRDGNTPLDLVKDGDTD 154 (165)
T ss_dssp HHTTCHHHHHHHHH----TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCTGGGSCTTCHH
T ss_pred HHcCcHHHHHHHHh----CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCChhHhHhcCChH
Confidence 99999999999999 8999999999999999999999999999999976 999999999999999999876543
No 70
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=5.3e-28 Score=187.29 Aligned_cols=160 Identities=25% Similarity=0.331 Sum_probs=117.6
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCC
Q 015738 69 VNAKGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDP 148 (401)
Q Consensus 69 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~ 148 (401)
....+.++|+.||..|+.++|++|+++|+++ +..+..|.||||+|+..|+.+++++|+++|+
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 71 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGADV------------------NAEDASGWTPLHLAAFNGHLEIVEVLLKNGA 71 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCCCC------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 3456678899999999999999999888773 5667788899999999999999999988887
Q ss_pred CCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccchHHHH
Q 015738 149 GYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKL 228 (401)
Q Consensus 149 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~l 228 (401)
++ ...+..|.||||+|+. .++.+++++|++.|++++..+..|.||||+|+.. ++.+.+++|
T Consensus 72 ~~-~~~~~~g~t~L~~A~~----------------~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~--~~~~~v~~L 132 (169)
T 2y1l_E 72 DV-NAVDHAGMTPLRLAAL----------------FGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMF--GHLEIVEVL 132 (169)
T ss_dssp CT-TCCCTTSCCHHHHHHH----------------TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT--TCHHHHHHH
T ss_pred CC-CccCCCCCCHHHHHHH----------------cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc--CCHHHHHHH
Confidence 74 3667788888888887 3378888888888888777777777777777666 566666666
Q ss_pred HHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcC
Q 015738 229 LEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETD 266 (401)
Q Consensus 229 l~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~ 266 (401)
++.+.. ++..+..|.|||++|+..|+.+++++|++.|
T Consensus 133 l~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 133 LKNGAD-VNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHcCCC-CCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 655433 5556666666666666666666666666543
No 71
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=3.9e-28 Score=185.66 Aligned_cols=154 Identities=21% Similarity=0.281 Sum_probs=141.1
Q ss_pred CCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHH
Q 015738 207 GKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAA 286 (401)
Q Consensus 207 ~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~ 286 (401)
+.+||+.|+.. ++.+.++++++..+..++..+..|.||||+ +..|+.+++++|++.|+++ +..+. .|.||||.|+
T Consensus 2 ~~~~L~~A~~~--g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~ 76 (156)
T 1bd8_A 2 AGDRLSGAAAR--GDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDT-SGTSPVHDAA 76 (156)
T ss_dssp HHHHHHHHHHH--TCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHH
T ss_pred cchHHHHHHHh--CCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCC-CCCCHHHHHH
Confidence 56899999999 999999999999655788899999999999 9999999999999999887 44443 7899999999
Q ss_pred hcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHH
Q 015738 287 GKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHD 366 (401)
Q Consensus 287 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~ 366 (401)
..|+.+++++|++.|.+ ++.+|..|+||||+|+..++.+++++|++ . ++++.+|..|.||||+|+..|+.++++
T Consensus 77 ~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~-~~~~~~~~~g~t~l~~A~~~~~~~~v~ 150 (156)
T 1bd8_A 77 RTGFLDTLKVLVEHGAD-VNVPDGTGALPIHLAVQEGHTAVVSFLAA----E-SDLHRRDARGLTPLELALQRGAQDLVD 150 (156)
T ss_dssp HTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHT----T-SCTTCCCTTSCCHHHHHHHSCCHHHHH
T ss_pred HcCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHhChHHHHHHHHh----c-cCCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 99999999999999987 68899999999999999999999999999 5 889999999999999999999999999
Q ss_pred HHHhh
Q 015738 367 VMNRS 371 (401)
Q Consensus 367 ~Ll~~ 371 (401)
+|+++
T Consensus 151 ~Ll~~ 155 (156)
T 1bd8_A 151 ILQGH 155 (156)
T ss_dssp HHHTT
T ss_pred HHHhh
Confidence 99864
No 72
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=2.2e-32 Score=221.95 Aligned_cols=198 Identities=17% Similarity=0.024 Sum_probs=126.0
Q ss_pred hhhhhHHHHHHH---HhhcCCCeeEEeecchhhhhchHHHHHHHHhhCChhhhcccCCCCcHHHHHHHcCCHHHHHHHHH
Q 015738 18 KDMERDVIERLL---TAKAKNTILHINIISSERENVSTKFVEEILEKCPALLLQVNAKGDTPLHLAAKFGHFEIVRVLIE 94 (401)
Q Consensus 18 ~~ll~~~~~~~~---~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 94 (401)
+.|++++.++.. .+..|.|+||+| +..|+.+++++|++ .|.+++..|..|.||||+||..|+.++|++|++
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A--~~~g~~~~v~~Ll~----~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~ 75 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDA--ALTGELEVVQQAVK----EMNDPSQPNEEGITALHNAICGANYSIVDFLIT 75 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHH--HHHTCHHHHHHHHH----HSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred eehhccCCCCccccccccchhHHHHHH--HHcCCHHHHHHHHh----cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 455555554332 223355667777 77777777777776 466777777777777777777777777777777
Q ss_pred hhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHH--HhcCCch
Q 015738 95 RAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYPYSANNYGKTPLYMA--AEYENRS 172 (401)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a--~~~~~~~ 172 (401)
+|+++ +..|..|.||||+|+..|+.+++++|+++|+++....+..|.|||++| +.
T Consensus 76 ~ga~~------------------n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~----- 132 (229)
T 2vge_A 76 AGANV------------------NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYR----- 132 (229)
T ss_dssp TTCCT------------------TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTS-----
T ss_pred CCCCC------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHh-----
Confidence 77763 456667777777777777777777777777775544446777777777 44
Q ss_pred hHHHhhhhhccCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccchHHHHHHhhccc--ccccccCCCcHHHHH
Q 015738 173 DMLRGLLENRTSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNL--IKETDQYGWTPIHYA 250 (401)
Q Consensus 173 ~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~--~~~~~~~~~t~L~~a 250 (401)
.++.+++++|++.|++++..+..+.++++.++.. . ..+.++.. +.. ++..|..|.||||+|
T Consensus 133 -----------~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~--~---~~~~ll~~-ga~~~~~~~d~~G~TpL~~A 195 (229)
T 2vge_A 133 -----------EGYADCATYLADVEQSMGLMNSGAVYALWDYSAE--F---GDELSFRE-GESVTVLRRDGPEETDWWWA 195 (229)
T ss_dssp -----------TTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCS--S---TTBCCBCT-TCEEEEEESSCTTCSSEEEE
T ss_pred -----------cChHHHHHHHHHcCCCcccccCCchHHHHHHhhc--c---ccccCccc-cccccccccCCCcccHHHHH
Confidence 3467777777777777777777777777654332 1 11222222 222 455566667777777
Q ss_pred HHcCCHHHHHH
Q 015738 251 AYYGNYRTVNL 261 (401)
Q Consensus 251 ~~~~~~~~~~~ 261 (401)
+..|+.++|+.
T Consensus 196 ~~~g~~~~v~~ 206 (229)
T 2vge_A 196 ALHGQEGYVPR 206 (229)
T ss_dssp EETTEEEEEEG
T ss_pred HHcCCcceeeh
Confidence 77666666654
No 73
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=6.6e-30 Score=207.42 Aligned_cols=193 Identities=15% Similarity=0.079 Sum_probs=157.2
Q ss_pred HHHHHhcCCCCccC---CCCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcC
Q 015738 190 VLALLENSTSVSHE---GPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETD 266 (401)
Q Consensus 190 ~~~Ll~~~~~~~~~---~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~ 266 (401)
++.|++.|++++.. +..+.||||+|+.. ++.+.++.|+..+. +++..+..|.||||+|+..|+.+++++|++.|
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~--g~~~~v~~Ll~~g~-~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g 77 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALT--GELEVVQQAVKEMN-DPSQPNEEGITALHNAICGANYSIVDFLITAG 77 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHH--TCHHHHHHHHHHSS-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHc--CCHHHHHHHHhcCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 45688888887654 44566789999999 99999999998755 58889999999999999999999999999999
Q ss_pred ccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccC-CCCCcHHHHH--HHhCChhHHHHHHhcCCccccccc
Q 015738 267 QSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVD-NRGCNFLHYA--MVSFHVGQLRNLLENNPLARSLID 343 (401)
Q Consensus 267 ~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~~g~t~l~~A--~~~~~~~~~~~Ll~~~~~~~~~~~ 343 (401)
+++ +..+. .|.||||+|+..|+.+++++|++.|++ ++.++ ..|+||||+| +..++.+++++|++ .|++++
T Consensus 78 a~~-n~~d~-~g~tpLh~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~----~ga~~~ 150 (229)
T 2vge_A 78 ANV-NSPDS-HGWTPLHCAASCNDTVICMALVQHGAA-IFATTLSDGATAFEKCDPYREGYADCATYLAD----VEQSMG 150 (229)
T ss_dssp CCT-TCCCT-TCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHH----HHHHTT
T ss_pred CCC-CCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCC-cccccCCCCCCHHHHHHHHhcChHHHHHHHHH----cCCCcc
Confidence 887 44444 799999999999999999999999998 46665 7999999999 99999999999999 899999
Q ss_pred cCCCCCCcHHHHHHHhCChhHHHHHHhhcCCC--hhhhhccCcceeeee-ecccee
Q 015738 344 EGDAEGNTPLHVLAAVRPKEFHDVMNRSTQAN--YDAVNKQNVSVRHVF-NYGYTE 396 (401)
Q Consensus 344 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~--~~~~~~~g~t~l~~a-~~~~~~ 396 (401)
.+|..|.||++.++..+.. ++|++. |++ ++.+|..|.|||++| ..|+.+
T Consensus 151 ~~~~~~~~~l~~~~~~~~~---~~ll~~-ga~~~~~~~d~~G~TpL~~A~~~g~~~ 202 (229)
T 2vge_A 151 LMNSGAVYALWDYSAEFGD---ELSFRE-GESVTVLRRDGPEETDWWWAALHGQEG 202 (229)
T ss_dssp TSGGGEEEESSCBCCSSTT---BCCBCT-TCEEEEEESSCTTCSSEEEEEETTEEE
T ss_pred cccCCchHHHHHHhhcccc---ccCccc-cccccccccCCCcccHHHHHHHcCCcc
Confidence 9999999999976555443 455544 888 778899999999999 444444
No 74
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=9e-28 Score=186.77 Aligned_cols=169 Identities=18% Similarity=0.088 Sum_probs=147.1
Q ss_pred CCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCC-CccCCCCCCcHHhHHHhhcccccchHHHHHHhhcccc
Q 015738 158 GKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTS-VSHEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNLI 236 (401)
Q Consensus 158 ~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~ 236 (401)
+.+||+.|+. .++.++++.|++.+.+ ++..+..|.||||+|+.. ++.+.+++|++.+. ++
T Consensus 2 ~~~~L~~A~~----------------~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~g~-~~ 62 (172)
T 3v30_A 2 DSLSIHQLAA----------------QGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAF--GEIETVRFLLEWGA-DP 62 (172)
T ss_dssp --CCHHHHHH----------------TTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHT--TCHHHHHHHHHHTC-CT
T ss_pred chhhHHHHHH----------------cCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHc--CCHHHHHHHHHcCC-Cc
Confidence 4689999998 4499999999999987 788899999999999999 88999999998764 47
Q ss_pred cccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHH
Q 015738 237 KETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFL 316 (401)
Q Consensus 237 ~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l 316 (401)
+..+..|.||||+|+..|+.+++++|++.|++. +..+. .|.||||+|+..++.+++++|++.|++ ++.+|..|.|||
T Consensus 63 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l 139 (172)
T 3v30_A 63 HILAKERESALSLASTGGYTDIVGLLLERDVDI-NIYDW-NGGTPLLYAVRGNHVKCVEALLARGAD-LTTEADSGYTPM 139 (172)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHH
T ss_pred hhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHH
Confidence 888999999999999999999999999999887 44443 789999999999999999999999988 688999999999
Q ss_pred HHHHHhCChhHHHHHHhcCCccccccccCCCCCCcH
Q 015738 317 HYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTP 352 (401)
Q Consensus 317 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~ 352 (401)
|+|+..++.+++++|++ .++++..++..|.||
T Consensus 140 ~~A~~~~~~~~~~~L~~----~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 140 DLAVALGYRKVQQVIEN----HILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHHTCHHHHHHHHH----HHHHHSCC-------
T ss_pred HHHHHhCcHHHHHHHHH----HHHHHhcccCCCCCC
Confidence 99999999999999999 899999999999887
No 75
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=7.9e-28 Score=183.12 Aligned_cols=150 Identities=23% Similarity=0.307 Sum_probs=103.8
Q ss_pred CcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHh
Q 015738 208 KTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAG 287 (401)
Q Consensus 208 ~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~ 287 (401)
.++|+.|+.. ++.+.++++++.+.. ++ .+..|.||||+|+..|+.+++++|++.|+++ +..+. .|.||||.|+.
T Consensus 3 ~~~L~~A~~~--g~~~~v~~Ll~~g~~-~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~ 76 (153)
T 1awc_B 3 GKKLLEAARA--GQDDEVRILMANGAP-FT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTK-VDRTPLHMAAS 76 (153)
T ss_dssp HHHHHHHHHH--TCHHHHHHHHHHTCC-CC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCT-TCCCHHHHHHH
T ss_pred cHHHHHHHHc--CCHHHHHHHHHcCCC-CC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCC-CCCCHHHHHHH
Confidence 4677777776 667777777766543 22 4566777777777777777777777776665 22222 56677777777
Q ss_pred cCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHH
Q 015738 288 KGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDV 367 (401)
Q Consensus 288 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ 367 (401)
.|+.+++++|++++.+ ++.+|..|+||||+|+..++.+++++|++ .|++++.+|..|.||||+|+..|+.+++++
T Consensus 77 ~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~ 151 (153)
T 1awc_B 77 EGHANIVEVLLKHGAD-VNAKDMLKMTALHWATEHNHQEVVELLIK----YGADVHTQSKFCKTAFDISIDNGNEDLAEI 151 (153)
T ss_dssp HTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred cChHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 7777777777777666 56677777777777777777777777777 667777777777777777777777777765
Q ss_pred H
Q 015738 368 M 368 (401)
Q Consensus 368 L 368 (401)
|
T Consensus 152 L 152 (153)
T 1awc_B 152 L 152 (153)
T ss_dssp H
T ss_pred h
Confidence 5
No 76
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=1.6e-28 Score=201.34 Aligned_cols=183 Identities=12% Similarity=0.093 Sum_probs=131.8
Q ss_pred CCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHH
Q 015738 205 PNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHL 284 (401)
Q Consensus 205 ~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~ 284 (401)
..|.||||.|+.. +..+.+..++..+.. ++. +..+.||||.|+..|+.+++++|++.|+++ +..+. .|.||||+
T Consensus 3 ~~g~t~L~~a~~~--~~~~~~~~ll~~g~~-~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~-~g~t~L~~ 76 (239)
T 1ycs_B 3 ITGQVSLPPGKRT--NLRKTGSERIAHGMR-VKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPND-EGITALHN 76 (239)
T ss_dssp --------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCT-TSCCHHHH
T ss_pred ccccccCchhhhh--hhHHHHHHHhccCCC-ccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC-CCCCHHHH
Confidence 4689999999998 888999999987655 443 367899999999999999999999999876 44444 79999999
Q ss_pred HHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCC-cHHHHH--HHhCC
Q 015738 285 AAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGN-TPLHVL--AAVRP 361 (401)
Q Consensus 285 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~-t~L~~A--~~~~~ 361 (401)
|+..|+.+++++|++++++ ++.+|..|+||||+|+..++.+++++|++ .|++++.++..|. ||||+| +..|+
T Consensus 77 A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~~~~t~l~~a~~~~~g~ 151 (239)
T 1ycs_B 77 AVCAGHTEIVKFLVQFGVN-VNAADSDGWTPLHCAASCNNVQVCKFLVE----SGAAVFAMTYSDMQTAADKCEEMEEGY 151 (239)
T ss_dssp HHHHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCSSSCCCHHHHCCSSSTTC
T ss_pred HHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCcceecCCCCcchHHHHHHhhhcc
Confidence 9999999999999999988 78899999999999999999999999999 8999999998877 999999 78899
Q ss_pred hhHHHHHHhhcCCChhhh---------hccCcceeeeeeccceeEEe
Q 015738 362 KEFHDVMNRSTQANYDAV---------NKQNVSVRHVFNYGYTELKV 399 (401)
Q Consensus 362 ~~~~~~Ll~~~~~~~~~~---------~~~g~t~l~~a~~~~~~~~~ 399 (401)
.+++++|+.. |++++.. +..|.+|.+++.+....+.+
T Consensus 152 ~~~~~~Ll~~-~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~~i~v 197 (239)
T 1ycs_B 152 TQCSQFLYGV-QEKMGIMNKGVIYALWDYEPQNDDELPMKEGDCMTI 197 (239)
T ss_dssp CCHHHHHHHH-HHHTTTTGGGEEEESSCBCCSSTTBCCBCSSCEEEE
T ss_pred HHHHHHHHHh-hhcccccccceEEEEeccCCCCCCcccccCCCEEEE
Confidence 9999999976 9988877 45577888887554444443
No 77
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=4.2e-28 Score=184.62 Aligned_cols=140 Identities=19% Similarity=0.123 Sum_probs=131.0
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhC
Q 015738 244 WTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSF 323 (401)
Q Consensus 244 ~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~ 323 (401)
.+||+.|+..|+.+++++|++.|++.. ....|.||||.|+..|+.+++++|++.+.+ ++.++..|+||||+|+..+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~ 78 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT---TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS-RDARTKVDRTPLHMAASEG 78 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC---CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHHT
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC---cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcC
Confidence 579999999999999999999998763 344789999999999999999999999988 6889999999999999999
Q ss_pred ChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHHhhcCCChhhhhccCcceeeeeec
Q 015738 324 HVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRSTQANYDAVNKQNVSVRHVFNY 392 (401)
Q Consensus 324 ~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 392 (401)
+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|++. |++++.+|..|.||+++|..
T Consensus 79 ~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~ 142 (153)
T 1awc_B 79 HANIVEVLLK----HGADVNAKDMLKMTALHWATEHNHQEVVELLIKY-GADVHTQSKFCKTAFDISID 142 (153)
T ss_dssp CHHHHHHHHT----TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHH
T ss_pred hHHHHHHHHH----cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHHHHHHH
Confidence 9999999999 8999999999999999999999999999999977 99999999999999999943
No 78
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=1.2e-27 Score=187.23 Aligned_cols=145 Identities=21% Similarity=0.204 Sum_probs=131.3
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHH
Q 015738 241 QYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAM 320 (401)
Q Consensus 241 ~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~ 320 (401)
..+.++|+.|+..|+.+++++|++.+....+..+. .|.||||.|+..|+.+++++|++.+.+ ++.++..|.||||+|+
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~ 80 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDD-HGFSPLHWACREGRSAVVEMLIMRGAR-INVMNRGDDTPLHLAA 80 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCC-CCCCHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCCHHHHHH
Confidence 34778999999999999999999986654344444 899999999999999999999999988 6889999999999999
Q ss_pred HhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHHhhcCCChhhhhccCcceeeeeec
Q 015738 321 VSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRSTQANYDAVNKQNVSVRHVFNY 392 (401)
Q Consensus 321 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 392 (401)
..++.+++++|++ .|++++.+|..|.||||+|+..++.+++++|++. |++++.+|..|.||+++|..
T Consensus 81 ~~~~~~~v~~Ll~----~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~ 147 (179)
T 3f6q_A 81 SHGHRDIVQKLLQ----YKADINAVNEHGNVPLHYACFWGQDQVAEDLVAN-GALVSICNKYGEMPVDKAKA 147 (179)
T ss_dssp HTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCSSBCCTTSCCGGGGSCH
T ss_pred HcCCHHHHHHHHH----cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCcchhccCCCCcHHHHHH
Confidence 9999999999999 8999999999999999999999999999999976 99999999999999999954
No 79
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=8.8e-28 Score=183.35 Aligned_cols=145 Identities=17% Similarity=0.143 Sum_probs=115.5
Q ss_pred cccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCc-H
Q 015738 237 KETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCN-F 315 (401)
Q Consensus 237 ~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t-~ 315 (401)
...+..+.||||+|+..|+.+++++|++.|+++ +..+. .|.||||+|+ .|+.+++++|++.+.+ ++.++..|+| |
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~-~~~~~~v~~Ll~~g~~-~~~~d~~g~ttp 81 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANP-NAPNS-YGRRPIQVMM-MGSARVAELLLLHGAE-PNCADPATLTRP 81 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCS-SSCCTTTSSC-TTCHHHHHHHHTTTCC-CCCCCTTTCCCH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCC-CCCCC-CCCCHHHHHH-cCCHHHHHHHHHcCCC-CCCcCCCCCcHH
Confidence 445677999999999999999999999999887 44444 8999999985 8999999999999987 7889999999 9
Q ss_pred HHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHHhhcCCChhhhhccCcceeeee
Q 015738 316 LHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRSTQANYDAVNKQNVSVRHVF 390 (401)
Q Consensus 316 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a 390 (401)
||+|+..++.+++++|++ .|++++.+|..|.||||+|+..++.+++++|++. |++++.+|..|.||.+-+
T Consensus 82 L~~A~~~~~~~~v~~Ll~----~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 82 VHDAAREGFLDTLVVLHR----AGARLDVRDAWGRLPVDLAEELGHRDVARYLRAA-AGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHHHHTCHHHHHHHHH----HTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSC-C-----------------
T ss_pred HHHHHHCCCHHHHHHHHH----cCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHc-CCCCCccCcCcCcccccC
Confidence 999999999999999999 8999999999999999999999999999999966 999999999999998754
No 80
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=5.6e-27 Score=179.21 Aligned_cols=153 Identities=22% Similarity=0.259 Sum_probs=116.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhhh-hhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCC
Q 015738 73 GDTPLHLAAKFGHFEIVRVLIERAK-LAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYP 151 (401)
Q Consensus 73 g~t~L~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~ 151 (401)
+.||||.||..|+.+++++|++... + ++..+..|.||||+ +..|+.+++++|+++|+++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~------------------~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~- 61 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVH------------------PDALNRFGKTALQV-MMFGSTAIALELLKQGASP- 61 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCC------------------TTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcC------------------ccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-
Confidence 4578888888888888888888721 2 35667778888888 7888888888888888774
Q ss_pred CCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccchHHHHHHh
Q 015738 152 YSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLLEK 231 (401)
Q Consensus 152 ~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~ 231 (401)
...+..|.||||+|+. .++.+++++|++.|++++..+..|.||||+|+.. ++.+.+++|+..
T Consensus 62 ~~~~~~g~t~L~~A~~----------------~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~ 123 (156)
T 1bd8_A 62 NVQDTSGTSPVHDAAR----------------TGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQE--GHTAVVSFLAAE 123 (156)
T ss_dssp TCCCTTSCCHHHHHHH----------------TTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHH--TCHHHHHHHHTT
T ss_pred CCcCCCCCCHHHHHHH----------------cCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHh--ChHHHHHHHHhc
Confidence 4667778888888887 3378888888888888888777777777777777 677777777766
Q ss_pred hcccccccccCCCcHHHHHHHcCCHHHHHHHHhc
Q 015738 232 KKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLET 265 (401)
Q Consensus 232 ~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~ 265 (401)
.+++..+..|.|||++|+..|+.+++++|+++
T Consensus 124 --~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 124 --SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp --SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred --cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 44666777777777777777777777777753
No 81
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=5.6e-29 Score=204.06 Aligned_cols=176 Identities=16% Similarity=0.040 Sum_probs=123.6
Q ss_pred chhhhhhhhcCCCCchhhhhhHHHHHHHHhhcCCCeeEEeecchhhhhchHHHHHHHHhhCChhhhcccCCCCcHHHHHH
Q 015738 2 DLNFFKAASAGNSEPFKDMERDVIERLLTAKAKNTILHINIISSERENVSTKFVEEILEKCPALLLQVNAKGDTPLHLAA 81 (401)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~ 81 (401)
.||||.|++.|+.+.++.|+++|.+...+.. |.||||+| +..|+.+++++|++ .+++++..|..|.||||+||
T Consensus 6 ~t~L~~a~~~~~~~~~~~ll~~g~~~~~~~~-~~t~L~~A--~~~g~~~~v~~Ll~----~g~~~~~~d~~g~t~L~~A~ 78 (239)
T 1ycs_B 6 QVSLPPGKRTNLRKTGSERIAHGMRVKFNPL-PLALLLDS--SLEGEFDLVQRIIY----EVDDPSLPNDEGITALHNAV 78 (239)
T ss_dssp --------------------------------CHHHHHHH--HHHTCHHHHHHHTS----TTSSCCCCCTTSCCHHHHHH
T ss_pred cccCchhhhhhhHHHHHHHhccCCCcccCch-hhHHHHHH--HHcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHH
Confidence 4899999999999999999999998877654 99999999 99999999999988 78899999999999999999
Q ss_pred HcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCC-CC
Q 015738 82 KFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYPYSANNYG-KT 160 (401)
Q Consensus 82 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~-~t 160 (401)
..|+.++|++|+++|++ ++..|..|.||||+|+..|+.+++++|+++|+++. ..+..+ .|
T Consensus 79 ~~g~~~~v~~Ll~~ga~------------------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~~~~t 139 (239)
T 1ycs_B 79 CAGHTEIVKFLVQFGVN------------------VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVF-AMTYSDMQT 139 (239)
T ss_dssp HHTCHHHHHHHHHHTCC------------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCSSSCCC
T ss_pred HcCCHHHHHHHHHcCCC------------------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-eecCCCCcc
Confidence 99999999999999998 46778899999999999999999999999999966 455445 49
Q ss_pred HHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccC---------CCCCCcHHhHHHhh
Q 015738 161 PLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHE---------GPNGKTALHAAAMR 217 (401)
Q Consensus 161 ~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~---------~~~~~t~l~~a~~~ 217 (401)
|+++|.. ...++.+++++|++.|++++.. +..+.++.+++...
T Consensus 140 ~l~~a~~--------------~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~ 191 (239)
T 1ycs_B 140 AADKCEE--------------MEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKE 191 (239)
T ss_dssp HHHHCCS--------------SSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCS
T ss_pred hHHHHHH--------------hhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccC
Confidence 9999943 2245889999999999888765 33455555555443
No 82
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=4.9e-27 Score=174.74 Aligned_cols=133 Identities=18% Similarity=0.135 Sum_probs=122.2
Q ss_pred ccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCC-C
Q 015738 234 NLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNR-G 312 (401)
Q Consensus 234 ~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~-g 312 (401)
..++..+..|.||||+|+..|+.+++++|++.|+++ +..+ ..|.||||+|+. ++.+++++|++++.+ ++.+|.. |
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~~g 78 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADP-NALN-RFGRRPIQVMMM-GSAQVAELLLLHGAE-PNCADPATL 78 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTCCTTTTTSTT-SCHHHHHHHHHHTCC-SSCCBTTTT
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcC-CCCCCHHHHHHc-CCHHHHHHHHHCCCC-CCCcCCCCC
Confidence 456778899999999999999999999999999887 3344 378999999999 999999999999988 6889999 9
Q ss_pred CcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHHhhcCCC
Q 015738 313 CNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRSTQAN 375 (401)
Q Consensus 313 ~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~ 375 (401)
+||||+|+..++.+++++|++ .|++++.+|..|.||||+|+..++.+++++|++. |+|
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~-Gad 136 (136)
T 1d9s_A 79 TRPVHDAAREGFLDTLVVLHR----AGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAA-TGD 136 (136)
T ss_dssp BCHHHHHHHHTCHHHHHHHHH----TCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHH-HCC
T ss_pred CCHHHHHHHcCCHHHHHHHHH----cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCC
Confidence 999999999999999999999 8999999999999999999999999999999976 775
No 83
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=8.7e-25 Score=160.64 Aligned_cols=126 Identities=32% Similarity=0.417 Sum_probs=116.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHH
Q 015738 242 YGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMV 321 (401)
Q Consensus 242 ~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~ 321 (401)
+|.||||+|+..|+.+++++|++.+.+.. ..+ ..|.||||.|+..++.+++++|++.+.+ ++.++..|.||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~ 77 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVN-AKD-KNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAAR 77 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTT-CCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCC-CcC-CCCCcHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCcHHHHHHH
Confidence 48899999999999999999999988763 333 3789999999999999999999999988 68899999999999999
Q ss_pred hCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHHhhcCCC
Q 015738 322 SFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRSTQAN 375 (401)
Q Consensus 322 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~ 375 (401)
.++.+++++|++ .|++++.+|..|.||||+|+..++.+++++|++. |+|
T Consensus 78 ~~~~~~~~~Ll~----~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-Gad 126 (126)
T 1n0r_A 78 NGHLEVVKLLLE----AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA-GAY 126 (126)
T ss_dssp TTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-TCC
T ss_pred cChHHHHHHHHH----cCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHc-CCC
Confidence 999999999999 8999999999999999999999999999999976 875
No 84
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.93 E-value=2.8e-27 Score=184.83 Aligned_cols=159 Identities=13% Similarity=0.091 Sum_probs=135.6
Q ss_pred hhhhhhhhcCCCCchhhhhhHHHHHHHHhhcCCCeeEEeecchhhhh----chHHHHHHHHhhCChhhhcccCCCCcHHH
Q 015738 3 LNFFKAASAGNSEPFKDMERDVIERLLTAKAKNTILHINIISSEREN----VSTKFVEEILEKCPALLLQVNAKGDTPLH 78 (401)
Q Consensus 3 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~g~t~L~ 78 (401)
++|+.|++.|+.+.++.+++.+++. ..+..|+||||+| +..++. +++++|++ .|++++.+|..|+||||
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~~~~-~~~~~g~T~Lh~A--~~~~~~~~~~~iv~~Ll~----~Gadvn~~d~~g~TpLh 80 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKGYED-KESVLKSNILYDV--LRNNNDEARYKISMFLIN----KGADIKSRTKEGTTLFF 80 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHSSSC-HHHHHTTTHHHHH--TTCSCHHHHHHHHHHHHH----TTCCSSCCCTTCCCTHH
T ss_pred cHHHHHHHcCCHHHHHHHHhcCccc-ccccCCCCHHHHH--HHcCCcchHHHHHHHHHH----CCCCCCCCCCCCCcHHH
Confidence 6799999999999999999987643 3335699999999 888754 58999988 89999999999999999
Q ss_pred HHHHcCC------HHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCC-hHHHHHHHcC-----CHHHHHHHHh-
Q 015738 79 LAAKFGH------FEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKN-TALHEAVSQG-----NVDVVKILTR- 145 (401)
Q Consensus 79 ~A~~~~~------~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-t~L~~A~~~~-----~~~~~~~Ll~- 145 (401)
+|+..|+ .+++++|+++|++ ++.+|..|. ||||+|+..+ +.+++++|++
T Consensus 81 ~a~~~~~~~~~~~~~iv~~Ll~~Gad------------------in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~ 142 (186)
T 3t8k_A 81 PLFQGGGNDITGTTELCKIFLEKGAD------------------ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQ 142 (186)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCC------------------SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTS
T ss_pred HHHHcCCcchhhHHHHHHHHHHCCCC------------------CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHh
Confidence 9999987 5789999999999 467888999 9999999954 4579999999
Q ss_pred cCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccC
Q 015738 146 EDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHE 203 (401)
Q Consensus 146 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~ 203 (401)
+|+++ ...|..|.|||++|+. .+..+++++|.+...+.+.+
T Consensus 143 ~gad~-~~~d~~G~TpL~~A~~----------------~~~~~~v~~L~~~~~~~~~~ 183 (186)
T 3t8k_A 143 SGLQL-LIKDKWGLTALEFVKR----------------CQKPIALKMMEDYIKKYNLK 183 (186)
T ss_dssp TTCCT-TCCCTTSCCHHHHHHT----------------TTCHHHHHHHHHHHHHHTCC
T ss_pred cCCCC-cccCCCCCCHHHHHHH----------------cCCHHHHHHHHHHHHHHhcc
Confidence 88884 5889999999999998 33788888888766555443
No 85
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=4.9e-26 Score=177.77 Aligned_cols=162 Identities=12% Similarity=0.060 Sum_probs=121.5
Q ss_pred CCcHHhHHHhhcccccchHHHHHHhhcccccccc-cCCCcHHHHHHHcCCH----HHHHHHHhcCccccccccCCCCchH
Q 015738 207 GKTALHAAAMRSFAVDTALPKLLEKKKNLIKETD-QYGWTPIHYAAYYGNY----RTVNLLLETDQSASNIADKDRKMTA 281 (401)
Q Consensus 207 ~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~-~~~~t~L~~a~~~~~~----~~~~~Ll~~~~~~~~~~~~~~g~t~ 281 (401)
+.++++.|+.. ++.+.+..++.... +..+ ..|.||||+|+..++. +++++|++.|+++ +..+. .|+||
T Consensus 6 ~~~~l~~Aa~~--g~~~~~~~l~~~~~---~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~-~g~Tp 78 (186)
T 3t8k_A 6 EYRTVSAAAML--GTYEDFLELFEKGY---EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTK-EGTTL 78 (186)
T ss_dssp HCSSHHHHHHH--SCHHHHHHHHHHSS---SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCT-TCCCT
T ss_pred cccHHHHHHHc--CCHHHHHHHHhcCc---ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCC-CCCcH
Confidence 45778888887 77777777776542 3333 6688888888888864 4888888888887 44443 78888
Q ss_pred HHHHHhcCC------HHHHHHhhhcCCCCccccCCCCC-cHHHHHHHhC-----ChhHHHHHHhcCCccccccccCCCCC
Q 015738 282 LHLAAGKGD------ARTVERIISGNPKCYELVDNRGC-NFLHYAMVSF-----HVGQLRNLLENNPLARSLIDEGDAEG 349 (401)
Q Consensus 282 L~~a~~~~~------~~~~~~Ll~~~~~~~~~~~~~g~-t~l~~A~~~~-----~~~~~~~Ll~~~~~~~~~~~~~~~~g 349 (401)
||+|+..++ .+++++|+++|++ ++.+|..|+ ||||+|+..+ ..+++++|++. .|++++.+|..|
T Consensus 79 Lh~a~~~~~~~~~~~~~iv~~Ll~~Gad-in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~---~gad~~~~d~~G 154 (186)
T 3t8k_A 79 FFPLFQGGGNDITGTTELCKIFLEKGAD-ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQ---SGLQLLIKDKWG 154 (186)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCC-SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTS---TTCCTTCCCTTS
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHCCCC-CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHh---cCCCCcccCCCC
Confidence 888888776 5778888888887 688888888 8888888843 34577888762 478888888888
Q ss_pred CcHHHHHHHhCChhHHHHHHhhcCCChhhhh
Q 015738 350 NTPLHVLAAVRPKEFHDVMNRSTQANYDAVN 380 (401)
Q Consensus 350 ~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~ 380 (401)
+||||+|++.++.+++++|+.. ..+.+.++
T Consensus 155 ~TpL~~A~~~~~~~~v~~L~~~-~~~~~~~~ 184 (186)
T 3t8k_A 155 LTALEFVKRCQKPIALKMMEDY-IKKYNLKE 184 (186)
T ss_dssp CCHHHHHHTTTCHHHHHHHHHH-HHHHTCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHH-HHHHhccc
Confidence 8888888888888888877744 44444443
No 86
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.92 E-value=8.6e-26 Score=177.13 Aligned_cols=179 Identities=21% Similarity=0.173 Sum_probs=142.2
Q ss_pred hhhhhhhcCCCCchhhhhhHHHHHHHHhhcCCCeeEEeecchhhhhchHHHHHHHHhhCChhhhcccCCCCcHHHHHHHc
Q 015738 4 NFFKAASAGNSEPFKDMERDVIERLLTAKAKNTILHINIISSERENVSTKFVEEILEKCPALLLQVNAKGDTPLHLAAKF 83 (401)
Q Consensus 4 ~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~ 83 (401)
..+.|++.|..+.+++|++.+. |.++.... ... .....+..|.||||+||..
T Consensus 3 ~~~~aa~~~~~~~~~~li~~~~--------~~~~~~~~--~~~------------------~~~~~~~~g~t~L~~A~~~ 54 (183)
T 3deo_A 3 NKIIGSRTAGEGAMEYLIEWKD--------GHSPSWVP--SSY------------------IAADVVSEYETPWWTAARK 54 (183)
T ss_dssp EEEEEEEEETTTEEEEEEEETT--------CCCCEEEE--GGG------------------SCHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHhcCCchhHHHHHHhC--------CCCccccc--hhc------------------ccccCCCCCCCHHHHHHHc
Confidence 3456777777777777776422 45554444 221 1122345778999999999
Q ss_pred CCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHH
Q 015738 84 GHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYPYSANNYGKTPLY 163 (401)
Q Consensus 84 ~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~ 163 (401)
|+.+++++|++ |++ ++..|..|.||||+|+..|+.+++++|+++|+++....+..|.||||
T Consensus 55 g~~~~v~~Ll~-~~~------------------~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~ 115 (183)
T 3deo_A 55 ADEQALSQLLE-DRD------------------VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALH 115 (183)
T ss_dssp TCHHHHHHHTT-TSC------------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHH
T ss_pred CCHHHHHHHHh-cCC------------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHH
Confidence 99999999999 776 46778899999999999999999999999999866444488999999
Q ss_pred HHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCC
Q 015738 164 MAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYG 243 (401)
Q Consensus 164 ~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~ 243 (401)
+|+. .++.+++++|+++|++++..+..|.||||+|+.. ++. ..+
T Consensus 116 ~A~~----------------~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~--~~~------------------~~~ 159 (183)
T 3deo_A 116 MAAG----------------YVRPEVVEALVELGADIEVEDERGLTALELAREI--LKT------------------TPK 159 (183)
T ss_dssp HHHH----------------TTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHH--HHT------------------CCC
T ss_pred HHHh----------------cCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHh--ccC------------------ccc
Confidence 9998 3489999999999999999999999999999875 211 346
Q ss_pred CcHHHHHHHcCCHHHHHHHHhc
Q 015738 244 WTPIHYAAYYGNYRTVNLLLET 265 (401)
Q Consensus 244 ~t~L~~a~~~~~~~~~~~Ll~~ 265 (401)
.+||++|+..|..+++++|.++
T Consensus 160 ~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 160 GNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp CSHHHHHHHHHHHHHHHHHHTC
T ss_pred ccHHHHHHHcCHHHHHHHHHHh
Confidence 7899999999999999998764
No 87
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.92 E-value=7.7e-25 Score=162.85 Aligned_cols=125 Identities=21% Similarity=0.246 Sum_probs=114.7
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHH
Q 015738 240 DQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYA 319 (401)
Q Consensus 240 ~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A 319 (401)
...+.||||+|+..|+.+++++|++.|++. +..+. .|.||||.|+..++.+++++|++.+.+ ++.+|..|.||||+|
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A 87 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADV-NAKDE-YGLTPLYLATAHGHLEIVEVLLKNGAD-VNAVDAIGFTPLHLA 87 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHH
Confidence 445789999999999999999999999887 33443 789999999999999999999999888 688999999999999
Q ss_pred HHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHHhh
Q 015738 320 MVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRS 371 (401)
Q Consensus 320 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 371 (401)
+..++.+++++|++ .|++++.+|..|.||||+|+..++.+++++|++.
T Consensus 88 ~~~~~~~~v~~Ll~----~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 88 AFIGHLEIAEVLLK----HGADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp HHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred HHcCCHHHHHHHHH----cCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 99999999999999 8999999999999999999999999999999864
No 88
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.92 E-value=4.9e-25 Score=163.92 Aligned_cols=132 Identities=17% Similarity=0.160 Sum_probs=99.5
Q ss_pred ChhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHH
Q 015738 63 PALLLQVNAKGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKI 142 (401)
Q Consensus 63 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ 142 (401)
+.+++..+..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+. ++.+++++
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------------------~~~~~~g~t~L~~A~~-~~~~~v~~ 62 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADP------------------NALNRFGRRPIQVMMM-GSAQVAEL 62 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT------------------TCCCTTCCTTTTTSTT-SCHHHHHH
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc------------------CCcCCCCCCHHHHHHc-CCHHHHHH
Confidence 4567778888888888888888888888888888763 5667778888888888 88888888
Q ss_pred HHhcCCCCCCCCCCC-CCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccc
Q 015738 143 LTREDPGYPYSANNY-GKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAV 221 (401)
Q Consensus 143 Ll~~~~~~~~~~~~~-~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~ 221 (401)
|+++++++. ..+.. |.||||+|+. .++.+++++|++.|++++..+..|.||||+|+.. ++
T Consensus 63 Ll~~g~~~~-~~~~~~g~t~L~~A~~----------------~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~--~~ 123 (136)
T 1d9s_A 63 LLLHGAEPN-CADPATLTRPVHDAAR----------------EGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQ--GH 123 (136)
T ss_dssp HHHHTCCSS-CCBTTTTBCHHHHHHH----------------HTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHH--TC
T ss_pred HHHCCCCCC-CcCCCCCCCHHHHHHH----------------cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc--CC
Confidence 888887743 56666 7888888887 2377888888888887777766666666666666 55
Q ss_pred cchHHHHHHhh
Q 015738 222 DTALPKLLEKK 232 (401)
Q Consensus 222 ~~~~~~ll~~~ 232 (401)
.++++.|++.+
T Consensus 124 ~~~~~~Ll~~G 134 (136)
T 1d9s_A 124 RDIARYLHAAT 134 (136)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHcC
Confidence 66666665543
No 89
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.92 E-value=4.8e-26 Score=169.37 Aligned_cols=122 Identities=25% Similarity=0.284 Sum_probs=112.8
Q ss_pred chhhhhhhhcCCCCchhhhhhHHHHHHHHhhcCCCeeEEeecchhhhhchHHHHHHHHhhCChhhhcccCCCCcHHHHHH
Q 015738 2 DLNFFKAASAGNSEPFKDMERDVIERLLTAKAKNTILHINIISSERENVSTKFVEEILEKCPALLLQVNAKGDTPLHLAA 81 (401)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~ 81 (401)
.|+||.||..|+.+++++|++.|.+....+..|.||||+| +..|+.+++++|++ .+++++..|..|.||||+|+
T Consensus 15 ~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~----~g~~~~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 15 GKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLA--TAHGHLEIVEVLLK----NGADVNAVDAIGFTPLHLAA 88 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHHTCHHHHHHHHH----TTCCTTCCCTTCCCHHHHHH
T ss_pred cHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH--HHcCCHHHHHHHHH----cCCCCCcCCCCCCCHHHHHH
Confidence 4799999999999999999999988877888899999999 99999999999998 68999999999999999999
Q ss_pred HcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcC
Q 015738 82 KFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTRED 147 (401)
Q Consensus 82 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~ 147 (401)
..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|+++|
T Consensus 89 ~~~~~~~v~~Ll~~g~~~------------------~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 89 FIGHLEIAEVLLKHGADV------------------NAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHTCHHHHHHHHHTTCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HcCCHHHHHHHHHcCCCC------------------cCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999884 567889999999999999999999999875
No 90
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.91 E-value=4e-25 Score=181.44 Aligned_cols=171 Identities=22% Similarity=0.153 Sum_probs=142.0
Q ss_pred CCCeeEEeecchhhhhchHHHHHHHHhhCChhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhh
Q 015738 34 KNTILHINIISSERENVSTKFVEEILEKCPALLLQVNAKGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPF 113 (401)
Q Consensus 34 g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 113 (401)
+.+++..+ +..|+.+.+..+.. .+.+ .+..|.||||+||..|+.++|++|++ |++
T Consensus 15 ~~~~~l~~--~~~g~~~~~~~~~~----~~~~---~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~--------------- 69 (244)
T 3ui2_A 15 GAMEYLIE--WKDGHSPSWVPSSY----IAAD---VVSEYETPWWTAARKADEQALSQLLE-DRD--------------- 69 (244)
T ss_dssp TEEEEEEE--ESSCCCCEEEEGGG----SCHH---HHHHHHHHHHHHHTTTCHHHHHHTTT-TCC---------------
T ss_pred CccHHHHH--HHcCCCcccccccc----cccc---cccCCCCHHHHHHHcCCHHHHHHHHc-CCC---------------
Confidence 56777777 77777777655433 3333 34578999999999999999999999 776
Q ss_pred HHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHH
Q 015738 114 RQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLAL 193 (401)
Q Consensus 114 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~L 193 (401)
++..|..|.||||+|+..|+.+++++|+++|+++....+..|.||||+|+. .++.+++++|
T Consensus 70 ---~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~----------------~g~~~~v~~L 130 (244)
T 3ui2_A 70 ---VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG----------------YVRPEVVEAL 130 (244)
T ss_dssp ---TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH----------------TTCHHHHHHH
T ss_pred ---CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH----------------cCCHHHHHHH
Confidence 467788999999999999999999999999999765545889999999998 3489999999
Q ss_pred HhcCCCCccCCCCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCcc
Q 015738 194 LENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQS 268 (401)
Q Consensus 194 l~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~ 268 (401)
+++|++++..+..|.||||+|+.. .. ...+.|||++|+..|+.+++++|++.+.+
T Consensus 131 l~~ga~~~~~d~~g~t~l~~A~~~--~~------------------~~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 131 VELGADIEVEDERGLTALELAREI--LK------------------TTPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp HHTTCCTTCCCTTCCCHHHHHHHH--HT------------------TCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred HHCCCCCCCCCCCCCcHHHHHHHH--Hh------------------ccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 999999999999999999999864 11 24578999999999999999999986443
No 91
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.91 E-value=1.2e-24 Score=165.83 Aligned_cols=146 Identities=22% Similarity=0.165 Sum_probs=113.3
Q ss_pred ccCCCCCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCch
Q 015738 201 SHEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMT 280 (401)
Q Consensus 201 ~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t 280 (401)
...+..+.||||+|+.. ++.+.+++|++.+ .+++..+..|.||||+|+ .|+.+++++|++.|+++ +..+. .|.|
T Consensus 6 ~~~~~~~~t~L~~A~~~--g~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~-~g~t 79 (156)
T 1bi7_B 6 GSSMEPSADWLATAAAR--GRVEEVRALLEAG-ANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADP-ATLT 79 (156)
T ss_dssp ----CCSTTHHHHHHHH--TCHHHHHHHHTTT-CCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCT-TTCC
T ss_pred cCCCccchHHHHHHHHc--CCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCC-CCCc
Confidence 34566799999999999 9999999999875 458889999999999985 89999999999999887 44444 7888
Q ss_pred -HHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHH
Q 015738 281 -ALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLA 357 (401)
Q Consensus 281 -~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~ 357 (401)
|||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..++.+++++|++ .|++++.++..|.||.+-+.
T Consensus 80 tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~t~~~~~~ 152 (156)
T 1bi7_B 80 RPVHDAAREGFLDTLVVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRA----AAGGTRGSNHARIDAAEGPS 152 (156)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHSS----CC------------------
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHhCHHHHHHHHHH----cCCCCCccCcCcCcccccCC
Confidence 99999999999999999999988 68899999999999999999999999999 89999999999999987543
No 92
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=4.4e-24 Score=156.82 Aligned_cols=126 Identities=31% Similarity=0.453 Sum_probs=109.8
Q ss_pred cCCCeeEEeecchhhhhchHHHHHHHHhhCChhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCchh
Q 015738 33 AKNTILHINIISSERENVSTKFVEEILEKCPALLLQVNAKGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGVEP 112 (401)
Q Consensus 33 ~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 112 (401)
+|.||||+| +..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|+++
T Consensus 1 ~g~t~L~~A--~~~~~~~~v~~Ll~----~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~------------- 61 (126)
T 1n0r_A 1 NGRTPLHLA--ARNGHLEVVKLLLE----AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV------------- 61 (126)
T ss_dssp CCCCHHHHH--HHHTCHHHHHHHHH----HTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-------------
T ss_pred CCccHHHHH--HHcCcHHHHHHHHH----cCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-------------
Confidence 388999999 99999999999988 57888888999999999999999999999999998874
Q ss_pred hHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHH
Q 015738 113 FRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLA 192 (401)
Q Consensus 113 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~ 192 (401)
+..+..|.||||+|+..++.+++++|+++|+++ ...+..|.||+++|+. .++.+++++
T Consensus 62 -----~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~----------------~~~~~~~~~ 119 (126)
T 1n0r_A 62 -----NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAAR----------------NGHLEVVKL 119 (126)
T ss_dssp -----TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH----------------TTCHHHHHH
T ss_pred -----cccCCCCCcHHHHHHHcChHHHHHHHHHcCCCC-cccCCCCCCHHHHHHH----------------cCcHHHHHH
Confidence 566778999999999999999999999998884 4678889999999998 338899999
Q ss_pred HHhcCCC
Q 015738 193 LLENSTS 199 (401)
Q Consensus 193 Ll~~~~~ 199 (401)
|+++|++
T Consensus 120 Ll~~Gad 126 (126)
T 1n0r_A 120 LLEAGAY 126 (126)
T ss_dssp HHHHTCC
T ss_pred HHHcCCC
Confidence 9998875
No 93
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.91 E-value=1.6e-24 Score=161.53 Aligned_cols=125 Identities=22% Similarity=0.226 Sum_probs=82.9
Q ss_pred ccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHH
Q 015738 238 ETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLH 317 (401)
Q Consensus 238 ~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~ 317 (401)
.++..|.||||+|+..|+.+++++|++.|+++ +..+. .|.||||+|+..++.+++++|++.+.+ ++.+|..|+||||
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~ 81 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDH-AGWTPLHEACNHGHLKVVELLLQHKAL-VNTTGYQNDSPLH 81 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCGGGCCHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCc-ccCcCCCCCCHHH
Confidence 34566777777777777777777777766655 22332 566777777777777777777776665 4666666777777
Q ss_pred HHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHH
Q 015738 318 YAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMN 369 (401)
Q Consensus 318 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 369 (401)
+|+..++.+++++|++ .|++++.+|..|.||||+|+..+..+++++|.
T Consensus 82 ~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~ 129 (137)
T 3c5r_A 82 DAAKNGHVDIVKLLLS----YGASRNAVNIFGLRPVDYTDDESMKSLLLLPE 129 (137)
T ss_dssp HHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-
T ss_pred HHHHcCCHHHHHHHHH----cCCCCCCCCCCCCCHHHHHhhccHHHHHhhcc
Confidence 7777777777777776 56667777777777777776666666655444
No 94
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.90 E-value=5.8e-24 Score=158.43 Aligned_cols=112 Identities=24% Similarity=0.275 Sum_probs=106.2
Q ss_pred CCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHH
Q 015738 275 KDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLH 354 (401)
Q Consensus 275 ~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~ 354 (401)
...|.||||.|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..++.+++++|++ .|++++.+|..|.||||
T Consensus 7 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~----~g~~~~~~~~~g~t~L~ 81 (137)
T 3c5r_A 7 NHRGETLLHIASIKGDIPSVEYLLQNGSD-PNVKDHAGWTPLHEACNHGHLKVVELLLQ----HKALVNTTGYQNDSPLH 81 (137)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCGGGCCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHH----cCCcccCcCCCCCCHHH
Confidence 34899999999999999999999999987 68899999999999999999999999999 89999999999999999
Q ss_pred HHHHhCChhHHHHHHhhcCCChhhhhccCcceeeeeec
Q 015738 355 VLAAVRPKEFHDVMNRSTQANYDAVNKQNVSVRHVFNY 392 (401)
Q Consensus 355 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 392 (401)
+|+..++.+++++|++. |++++.+|..|.||+++|..
T Consensus 82 ~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~ 118 (137)
T 3c5r_A 82 DAAKNGHVDIVKLLLSY-GASRNAVNIFGLRPVDYTDD 118 (137)
T ss_dssp HHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCGGGGCCC
T ss_pred HHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHhh
Confidence 99999999999999966 99999999999999999953
No 95
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=7e-24 Score=154.72 Aligned_cols=108 Identities=17% Similarity=0.081 Sum_probs=78.8
Q ss_pred CCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHH
Q 015738 277 RKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVL 356 (401)
Q Consensus 277 ~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A 356 (401)
.|.||||.|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..++.+++++|++ .|++++.+|..|.||||+|
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~d~~g~tpL~~A 80 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGED-VNRTLEGGRKPLHYAADCGQLEILEFLLL----KGADINAPDKHHITPLLSA 80 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCC-TTSCCTTSSCHHHHHHHTTCHHHHHHHHT----TTCCTTCCCTTSCCHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCC-cCccCCCCCcHHHHHHHcCCHHHHHHHHH----cCCCCCcCCCCCCCHHHHH
Confidence 456777777777777777777777665 56677777777777777777777777777 6677777777777777777
Q ss_pred HHhCChhHHHHHHhhcCCChhhhhccCcceeeee
Q 015738 357 AAVRPKEFHDVMNRSTQANYDAVNKQNVSVRHVF 390 (401)
Q Consensus 357 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a 390 (401)
+..++.+++++|++. |++++.+|..|.||+++|
T Consensus 81 ~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A 113 (123)
T 3aaa_C 81 VYEGHVSCVKLLLSK-GADKTVKGPDGLTAFEAT 113 (123)
T ss_dssp HHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHC
T ss_pred HHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHh
Confidence 777777777777755 777777777777777777
No 96
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.90 E-value=2.6e-23 Score=175.46 Aligned_cols=138 Identities=21% Similarity=0.194 Sum_probs=120.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCccccccc----cCCCCchHHHHHHhc---CCHHHHHHhhhcCCCCccccCCCCCcH
Q 015738 243 GWTPIHYAAYYGNYRTVNLLLETDQSASNIA----DKDRKMTALHLAAGK---GDARTVERIISGNPKCYELVDNRGCNF 315 (401)
Q Consensus 243 ~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~----~~~~g~t~L~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~g~t~ 315 (401)
..++|+.|+..|+.+.++.|++.|+++.... ....|.||||+|+.. ++.+++++|++.|++ ++.+|..|+||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-vn~~d~~G~Tp 229 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADGNTA 229 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-TTCCCTTCCCH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-CCCCCCCCCCH
Confidence 4467999999999999999999998874320 234899999999987 899999999999988 78899999999
Q ss_pred HHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHHhhcCCChhhhhccCcceeeeeec
Q 015738 316 LHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRSTQANYDAVNKQNVSVRHVFNY 392 (401)
Q Consensus 316 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 392 (401)
||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+.. |++ .|.||||+|..
T Consensus 230 Lh~A~~~g~~~~v~~Ll~----~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~-ga~------~g~tpLh~A~~ 295 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLK----GRALVGTVNEAGETALDIARKKHHKECEELLEQA-QAG------TFAFPLHVDYS 295 (301)
T ss_dssp HHHHHHTTCHHHHHHHHH----TTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHH-HHH------TTSSCCC----
T ss_pred HHHHHHcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHh-cCC------CCCChhHHHHh
Confidence 999999999999999999 8999999999999999999999999999999966 654 68999999943
No 97
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.90 E-value=5.9e-24 Score=172.36 Aligned_cols=139 Identities=21% Similarity=0.134 Sum_probs=112.7
Q ss_pred ccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhc-CCCCccccCCCCCcHH
Q 015738 238 ETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISG-NPKCYELVDNRGCNFL 316 (401)
Q Consensus 238 ~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~g~t~l 316 (401)
..+..|.||||+|+..|+.+++++|++.|+++ +..+. .|.||||+|+..|+.+++++|++. +.+ ++.+|..|+|||
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-~~~~d~~g~tpL 144 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECLDNRVGV-NGLDK-AGSTALYWACHGGHKDIVEMLFTQPNIE-LNQQNKLGDTAL 144 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHTTCHHHHHHHTTSTTCC-CCCCCTTSCCHH
T ss_pred ccccccccccccccccCcHHHHHHHHhCCCCc-cccCC-CCCCHHHHHHHcCCHHHHHHHHcCCCCC-ccccCCCCCCHH
Confidence 34667899999999999999999999999887 44444 799999999999999999999999 555 789999999999
Q ss_pred HHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHHhhcCCChhhhhccCc
Q 015738 317 HYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRSTQANYDAVNKQNV 384 (401)
Q Consensus 317 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~ 384 (401)
|+|+..|+.+++++|++ .|++++.+|..|.||||+|+..+..++++.|+.. |++.+.+|..|.
T Consensus 145 ~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~-~~~~~~~~~~~~ 207 (222)
T 3ehr_A 145 HAAAWKGYADIVQLLLA----KGARTDLRNIEKKLAFDMATNAACASLLKKKQGT-DAVRTLSNAEDY 207 (222)
T ss_dssp HHHHHHTCHHHHHHHHH----HTCCSCCCCTTSCCHHHHCCSHHHHHHHC------------------
T ss_pred HHHHHcCCHHHHHHHHH----cCCCCccccCCCCCHHHHhcchhHHHHHHHHhcc-chhhhccchhhh
Confidence 99999999999999999 8999999999999999999999999999999866 998888877653
No 98
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.90 E-value=3.5e-24 Score=175.84 Aligned_cols=166 Identities=17% Similarity=0.131 Sum_probs=141.2
Q ss_pred hhhhhhhhcCCCCchhhhhhHHHHHHHHhhcCCCeeEEeecchhhhhchHHHHHHHHhhCChhhhcccCCCCcHHHHHHH
Q 015738 3 LNFFKAASAGNSEPFKDMERDVIERLLTAKAKNTILHINIISSERENVSTKFVEEILEKCPALLLQVNAKGDTPLHLAAK 82 (401)
Q Consensus 3 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~ 82 (401)
++++.++..|+.+.++.+...+.+. +..|.||||+| +..|+.+++++|++ +.+++..|..|.||||+||.
T Consensus 17 ~~~l~~~~~g~~~~~~~~~~~~~~~---~~~g~t~L~~A--~~~g~~~~v~~Ll~-----~~~~~~~d~~g~t~L~~A~~ 86 (244)
T 3ui2_A 17 MEYLIEWKDGHSPSWVPSSYIAADV---VSEYETPWWTA--ARKADEQALSQLLE-----DRDVDAVDENGRTALLFVAG 86 (244)
T ss_dssp EEEEEEESSCCCCEEEEGGGSCHHH---HHHHHHHHHHH--HTTTCHHHHHHTTT-----TCCTTCBCTTSCBHHHHHHH
T ss_pred cHHHHHHHcCCCccccccccccccc---ccCCCCHHHHH--HHcCCHHHHHHHHc-----CCCCCCcCCCCCCHHHHHHH
Confidence 3566778888888888777655433 23489999999 99999999999977 67899999999999999999
Q ss_pred cCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhcc-CCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCH
Q 015738 83 FGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVN-NEKNTALHEAVSQGNVDVVKILTREDPGYPYSANNYGKTP 161 (401)
Q Consensus 83 ~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~ 161 (401)
.|+.++|++|+++|+++ +..+ ..|.||||+|+..|+.+++++|+++|+++ ...+..|.||
T Consensus 87 ~g~~~~v~~Ll~~ga~~------------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~ 147 (244)
T 3ui2_A 87 LGSDKCVRLLAEAGADL------------------DHRDMRGGLTALHMAAGYVRPEVVEALVELGADI-EVEDERGLTA 147 (244)
T ss_dssp HTCHHHHHHHHHTTCCT------------------TCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCH
T ss_pred CCCHHHHHHHHHcCCCC------------------CcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcH
Confidence 99999999999999985 4555 67999999999999999999999999985 4789999999
Q ss_pred HHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcCCCCccCCCCCCcHHhHHHhhcccccchHHHHHHhh
Q 015738 162 LYMAAEYENRSDMLRGLLENRTSASFDMVLALLENSTSVSHEGPNGKTALHAAAMRSFAVDTALPKLLEKK 232 (401)
Q Consensus 162 l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~ 232 (401)
||+|+... ....+.+||++|+.. ++.+.++.|+...
T Consensus 148 l~~A~~~~---------------------------------~~~~~~~~l~~a~~~--g~~~iv~~L~~~~ 183 (244)
T 3ui2_A 148 LELAREIL---------------------------------KTTPKGNPMQFGRRI--GLEKVINVLEGQV 183 (244)
T ss_dssp HHHHHHHH---------------------------------TTCCCSSHHHHHHHH--HHHHHHHHHHHHH
T ss_pred HHHHHHHH---------------------------------hccCCCCHHHHHHHc--ChHHHHHHHHHhc
Confidence 99999621 113579999999998 8888888888764
No 99
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.89 E-value=1.7e-23 Score=152.69 Aligned_cols=114 Identities=17% Similarity=0.113 Sum_probs=101.8
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHH
Q 015738 240 DQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYA 319 (401)
Q Consensus 240 ~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A 319 (401)
+..+.||||+|+..|+.+++++|++.+.++ +..+. .|.||||+|+..++.+++++|++.+.+ ++.+|..|+||||+|
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~tpL~~A 80 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLE-GGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKHHITPLLSA 80 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCT-TSSCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCc-CccCC-CCCcHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHH
Confidence 456889999999999999999999999876 33443 799999999999999999999999988 788999999999999
Q ss_pred HHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhC
Q 015738 320 MVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVR 360 (401)
Q Consensus 320 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~ 360 (401)
+..++.+++++|++ .|++++.+|..|.||||+|...+
T Consensus 81 ~~~~~~~~v~~Ll~----~ga~~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 81 VYEGHVSCVKLLLS----KGADKTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp HHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHCCCHH
T ss_pred HHcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHhCCHH
Confidence 99999999999999 89999999999999999994433
No 100
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.89 E-value=2.5e-22 Score=167.49 Aligned_cols=134 Identities=16% Similarity=0.244 Sum_probs=119.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCcccccc----ccCCCCchHHHHHHhc---CCHHHHHHhhhcCCCCccccCCCCCcH
Q 015738 243 GWTPIHYAAYYGNYRTVNLLLETDQSASNI----ADKDRKMTALHLAAGK---GDARTVERIISGNPKCYELVDNRGCNF 315 (401)
Q Consensus 243 ~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~----~~~~~g~t~L~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~g~t~ 315 (401)
..++|+.|+..|+.+.++.+++.|.+.... .....|.||||+|+.. ++.+++++|+++|++ ++.+|..|+||
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~-in~~d~~g~Tp 208 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDKQTGKGSTA 208 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TTCCCTTCCCH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC-ccccCCCCCCH
Confidence 457899999999999999999999886322 1234799999999999 899999999999988 78899999999
Q ss_pred HHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHHhhcCCChhhhhccCcceeeee
Q 015738 316 LHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRSTQANYDAVNKQNVSVRHVF 390 (401)
Q Consensus 316 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a 390 (401)
||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|++. |+ +.+++|.+
T Consensus 209 Lh~A~~~g~~~~v~~Ll~----~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-ga--------~~~~~~~~ 270 (278)
T 1dcq_A 209 LHYCCLTDNAECLKLLLR----GKASIEIANESGETPLDIAKRLKHEHCEELLTQA-LS--------GRFNSHVH 270 (278)
T ss_dssp HHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-HT--------TCCCSSCC
T ss_pred HHHHHHcCCHHHHHHHHH----cCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHc-CC--------CCCCccee
Confidence 999999999999999999 8999999999999999999999999999999976 65 35666665
No 101
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.88 E-value=2.8e-22 Score=157.03 Aligned_cols=138 Identities=26% Similarity=0.334 Sum_probs=107.3
Q ss_pred CCCcHHhHHHhhcccccchHHHHHHhhcccccccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHH
Q 015738 206 NGKTALHAAAMRSFAVDTALPKLLEKKKNLIKETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLA 285 (401)
Q Consensus 206 ~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a 285 (401)
.|.||||+|+.. ++.+.++.++. +.+++..+..|.||||+|+..|+.+++++|++.|+++ +..+...|.||||+|
T Consensus 43 ~g~t~L~~A~~~--g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A 117 (183)
T 3deo_A 43 EYETPWWTAARK--ADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMA 117 (183)
T ss_dssp HHHHHHHHHHHT--TCHHHHHHHTT--TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSSCCHHHHH
T ss_pred CCCCHHHHHHHc--CCHHHHHHHHh--cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHH
Confidence 577888888887 77888888887 4557778888888888888888888888888888776 334434788888888
Q ss_pred HhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHH
Q 015738 286 AGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFH 365 (401)
Q Consensus 286 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~ 365 (401)
+..|+.+++++|+++|++ ++.+|..|+||||+|++.++. ..+.+||++|+..|..+++
T Consensus 118 ~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~---------------------~~~~~~l~~a~~~~~~~i~ 175 (183)
T 3deo_A 118 AGYVRPEVVEALVELGAD-IEVEDERGLTALELAREILKT---------------------TPKGNPMQFGRRIGLEKVI 175 (183)
T ss_dssp HHTTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHHHT---------------------CCCCSHHHHHHHHHHHHHH
T ss_pred HhcCcHHHHHHHHHcCCC-CcCCCCCCCCHHHHHHHhccC---------------------cccccHHHHHHHcCHHHHH
Confidence 888888888888888877 677888888888888763321 3567888888888888888
Q ss_pred HHHHh
Q 015738 366 DVMNR 370 (401)
Q Consensus 366 ~~Ll~ 370 (401)
++|.+
T Consensus 176 ~~L~~ 180 (183)
T 3deo_A 176 NVLEG 180 (183)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 88764
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.87 E-value=1.9e-23 Score=169.37 Aligned_cols=138 Identities=20% Similarity=0.158 Sum_probs=111.9
Q ss_pred HHHhhcCCCeeEEeecchhhhhchHHHHHHHHhhCChhhhcccCCCCcHHHHHHHcCCHHHHHHHHHh-hhhhccCCCCC
Q 015738 28 LLTAKAKNTILHINIISSERENVSTKFVEEILEKCPALLLQVNAKGDTPLHLAAKFGHFEIVRVLIER-AKLAQRGDEEP 106 (401)
Q Consensus 28 ~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~ 106 (401)
...+..|.||||+| +..|+.+++++|++ .+.+++..|..|.||||+||..|+.++|++|+++ |++
T Consensus 67 ~~~~~~g~t~L~~A--~~~g~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-------- 132 (222)
T 3ehr_A 67 AEQAESIDNPLHEA--AKRGNLSWLRECLD----NRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE-------- 132 (222)
T ss_dssp HHHEEEESCHHHHH--HHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC--------
T ss_pred cccccccccccccc--cccCcHHHHHHHHh----CCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC--------
Confidence 34566799999999 99999999999998 7899999999999999999999999999999998 877
Q ss_pred CCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCC
Q 015738 107 ESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSAS 186 (401)
Q Consensus 107 ~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~ 186 (401)
++..|..|.||||+|+..|+.+++++|+++|+++ ...+..|.||+++|+. .+.
T Consensus 133 ----------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~----------------~~~ 185 (222)
T 3ehr_A 133 ----------LNQQNKLGDTALHAAAWKGYADIVQLLLAKGART-DLRNIEKKLAFDMATN----------------AAC 185 (222)
T ss_dssp ----------CCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCS-CCCCTTSCCHHHHCCS----------------HHH
T ss_pred ----------ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-ccccCCCCCHHHHhcc----------------hhH
Confidence 4677889999999999999999999999999985 4788999999999998 338
Q ss_pred HHHHHHHHhcCCCCccCCCC
Q 015738 187 FDMVLALLENSTSVSHEGPN 206 (401)
Q Consensus 187 ~~~~~~Ll~~~~~~~~~~~~ 206 (401)
.++++.+++.++.....+..
T Consensus 186 ~~~l~~l~~~~~~~~~~~~~ 205 (222)
T 3ehr_A 186 ASLLKKKQGTDAVRTLSNAE 205 (222)
T ss_dssp HHHHC---------------
T ss_pred HHHHHHHhccchhhhccchh
Confidence 88999999988877665443
No 103
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.87 E-value=8.2e-22 Score=169.77 Aligned_cols=146 Identities=15% Similarity=0.137 Sum_probs=116.3
Q ss_pred ccCCCcHHHHHHHc-CCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHH
Q 015738 240 DQYGWTPIHYAAYY-GNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHY 318 (401)
Q Consensus 240 ~~~~~t~L~~a~~~-~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~ 318 (401)
...+.|+||.|+.. ++.+++++|++.|++++.......|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad-vn~~d~~G~TpLh~ 274 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGAN-VNQADSAGRGPLHH 274 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHH
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHH
Confidence 33456899999999 99999999999999985443335899999999999999999999999988 78999999999999
Q ss_pred HHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHHhh--cCCChhhhhccCcceeeee
Q 015738 319 AMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRS--TQANYDAVNKQNVSVRHVF 390 (401)
Q Consensus 319 A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--~~~~~~~~~~~g~t~l~~a 390 (401)
|+..++.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+.. .+++....+..+.|+++++
T Consensus 275 A~~~g~~~~v~~LL~----~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~ 344 (368)
T 3jue_A 275 ATILGHTGLACLFLK----RGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIF 344 (368)
T ss_dssp HHHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-------------------
T ss_pred HHHcCcHHHHHHHHH----CcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHH
Confidence 999999999999999 8999999999999999999999999999999865 2345556778899999888
No 104
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.87 E-value=1.1e-21 Score=135.21 Aligned_cols=93 Identities=29% Similarity=0.356 Sum_probs=83.6
Q ss_pred CCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHH
Q 015738 277 RKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVL 356 (401)
Q Consensus 277 ~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A 356 (401)
.|.||||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..++.+++++|++ .|++++.+|..|.||||+|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~d~~g~t~l~~A 75 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLE----AGADVNAKDKNGRTPLHLA 75 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCCCccCCCCCCHHHHH
Confidence 377999999999999999999999887 68899999999999999999999999999 8899999999999999999
Q ss_pred HHhCChhHHHHHHhhcCCC
Q 015738 357 AAVRPKEFHDVMNRSTQAN 375 (401)
Q Consensus 357 ~~~~~~~~~~~Ll~~~~~~ 375 (401)
+..++.+++++|++. |++
T Consensus 76 ~~~~~~~~~~~Ll~~-ga~ 93 (93)
T 1n0q_A 76 ARNGHLEVVKLLLEA-GAY 93 (93)
T ss_dssp HHTTCHHHHHHHHHT-TCC
T ss_pred HHcCCHHHHHHHHHc-CCC
Confidence 999999999999866 764
No 105
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.87 E-value=5.3e-21 Score=161.32 Aligned_cols=141 Identities=16% Similarity=0.099 Sum_probs=117.4
Q ss_pred CCCcHHhHHHhhcccccchHHHHHHhhcccccc------cccCCCcHHHHHHHc---CCHHHHHHHHhcCccccccccCC
Q 015738 206 NGKTALHAAAMRSFAVDTALPKLLEKKKNLIKE------TDQYGWTPIHYAAYY---GNYRTVNLLLETDQSASNIADKD 276 (401)
Q Consensus 206 ~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~~~~------~~~~~~t~L~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~ 276 (401)
...++|+.|+.. ++.+.+..++..+.. ++. .+..|.||||+|+.. ++.+++++|++.|+++ +..+ .
T Consensus 150 ~~~~~L~~A~~~--g~~~~v~~ll~~g~d-~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d-~ 224 (301)
T 2b0o_E 150 PEPQRLWTAICN--RDLLSVLEAFANGQD-FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKA-A 224 (301)
T ss_dssp -CHHHHHHHHHT--TCHHHHHHHHHTTCC-TTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCC-T
T ss_pred chHHHHhhhhhc--cCHHHHHHHHhcCCc-ccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCC-C
Confidence 345789999998 889999999876654 555 588899999999997 8999999999999987 4444 4
Q ss_pred CCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHH
Q 015738 277 RKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVL 356 (401)
Q Consensus 277 ~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A 356 (401)
.|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..++.+++++|++ .|++ .|.||||+|
T Consensus 225 ~G~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~----~ga~------~g~tpLh~A 293 (301)
T 2b0o_E 225 DGNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQ----AQAG------TFAFPLHVD 293 (301)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCC-CSCCCTTSCCHHHHHHHHTCHHHHHHHHH----HHHH------TTSSCCC--
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHH----hcCC------CCCChhHHH
Confidence 899999999999999999999999988 78999999999999999999999999999 6765 589999999
Q ss_pred HHhCCh
Q 015738 357 AAVRPK 362 (401)
Q Consensus 357 ~~~~~~ 362 (401)
+..|+.
T Consensus 294 ~~~g~~ 299 (301)
T 2b0o_E 294 YSWVIS 299 (301)
T ss_dssp ------
T ss_pred HhcCCc
Confidence 998863
No 106
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.86 E-value=1.7e-21 Score=176.56 Aligned_cols=141 Identities=20% Similarity=0.180 Sum_probs=113.7
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCcccccc----ccCCCCchHHHHHHh---cCCHHHHHHhhhcCCCCccccCCCCCcHH
Q 015738 244 WTPIHYAAYYGNYRTVNLLLETDQSASNI----ADKDRKMTALHLAAG---KGDARTVERIISGNPKCYELVDNRGCNFL 316 (401)
Q Consensus 244 ~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~----~~~~~g~t~L~~a~~---~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l 316 (401)
.+.||.|+..|+.+.++.|++.|++++.. .....|.||||+|+. .|+.+++++|+++|++ ++.+|..|+|||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~-vn~~d~~g~TpL 211 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADGNTAL 211 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-TTCCCSSSCCHH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC-CCccCCCCCcHH
Confidence 36799999999999999999999887422 123479999999966 8999999999999988 789999999999
Q ss_pred HHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHHHHHhCChhHHHHHHhhcCCChhhhhccCcceeeee
Q 015738 317 HYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHVLAAVRPKEFHDVMNRSTQANYDAVNKQNVSVRHVF 390 (401)
Q Consensus 317 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a 390 (401)
|+|+..|+.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|++. |++++.....+.+++..+
T Consensus 212 h~A~~~g~~~~v~~Ll~----~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~-ga~~~~~~~h~~~~~~~~ 280 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLK----GRALVGTVNEAGETALDIARKKHHKECEELLEQA-QAGTFAFPLHVDYSWVIS 280 (497)
T ss_dssp HHHTTTTCHHHHHHHHH----TCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHT-CC----------------
T ss_pred HHHHHcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHh-CCCCCCCcceeeccccCC
Confidence 99999999999999999 8999999999999999999999999999999966 999988655555554444
No 107
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.86 E-value=9.4e-22 Score=141.55 Aligned_cols=106 Identities=23% Similarity=0.271 Sum_probs=95.8
Q ss_pred CCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHH
Q 015738 276 DRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHV 355 (401)
Q Consensus 276 ~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~ 355 (401)
..|.||||.|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..++.+++++|++ .|++++.+|..|.||||+
T Consensus 7 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~----~g~~~~~~d~~g~tpl~~ 81 (115)
T 2l6b_A 7 KDGNTPLHNAAKNGHAEEVKKLLSKGAD-VNARSKDGNTPLHLAAKNGHAEIVKLLLA----KGADVNARSKDGNTPEHL 81 (115)
T ss_dssp CSSCCHHHHHHHHTCHHHHHHHTTTTCC-SSCCCSSSCCTTHHHHTTTCHHHHHHHTT----TTCCTTCCCTTCCCTTHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHH----cCCCCcccCCCCCCHHHH
Confidence 4788999999999999999999999887 68889999999999999999999999999 789999999999999999
Q ss_pred HHHhCChhHHHHHHhhcCCChhhhhccCccee
Q 015738 356 LAAVRPKEFHDVMNRSTQANYDAVNKQNVSVR 387 (401)
Q Consensus 356 A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l 387 (401)
|+..++.+++++|++. |++++.++..|.+|-
T Consensus 82 A~~~~~~~~~~~Ll~~-ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAK-GADVNARSWGSSHHH 112 (115)
T ss_dssp HHTTTCHHHHHHHHTT-SSSHHHHSCCCC---
T ss_pred HHHCCCHHHHHHHHHc-CCCCCcCCccccccc
Confidence 9999999999999966 999999999999884
No 108
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.86 E-value=5.6e-22 Score=136.65 Aligned_cols=93 Identities=31% Similarity=0.430 Sum_probs=85.7
Q ss_pred cCCCeeEEeecchhhhhchHHHHHHHHhhCChhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCchh
Q 015738 33 AKNTILHINIISSERENVSTKFVEEILEKCPALLLQVNAKGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGVEP 112 (401)
Q Consensus 33 ~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 112 (401)
+|+||||+| +..|+.+++++|++ .|.+++.+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 1 ~g~t~L~~A--~~~~~~~~v~~Ll~----~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~------------- 61 (93)
T 1n0q_A 1 NGRTPLHLA--ARNGHLEVVKLLLE----AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV------------- 61 (93)
T ss_dssp --CCHHHHH--HHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-------------
T ss_pred CCCcHHHHH--HHcCCHHHHHHHHH----cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-------------
Confidence 389999999 99999999999998 79999999999999999999999999999999999984
Q ss_pred hHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCC
Q 015738 113 FRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPG 149 (401)
Q Consensus 113 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~ 149 (401)
+.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 62 -----~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 62 -----NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp -----TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred -----CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 67788999999999999999999999998863
No 109
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.85 E-value=1.3e-22 Score=174.75 Aligned_cols=141 Identities=18% Similarity=0.187 Sum_probs=103.4
Q ss_pred hhhhhhhhc-CCCCchhhhhhHHHHHHHHh--hcCCCeeEEeecchhhhhchHHHHHHHHhhCChhhhcccCCCCcHHHH
Q 015738 3 LNFFKAASA-GNSEPFKDMERDVIERLLTA--KAKNTILHINIISSERENVSTKFVEEILEKCPALLLQVNAKGDTPLHL 79 (401)
Q Consensus 3 ~~l~~A~~~-g~~~~~~~ll~~~~~~~~~~--~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~ 79 (401)
++||.|+.. |+++++++|++.|++.+..+ ..|.||||+| +..|+.+++++|++ .|++++..|..|.||||+
T Consensus 201 t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~A--a~~g~~~iv~~LL~----~Gadvn~~d~~G~TpLh~ 274 (368)
T 3jue_A 201 ALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQA--TAANSLLACEFLLQ----NGANVNQADSAGRGPLHH 274 (368)
T ss_dssp HHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHH--HHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHH
T ss_pred cHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHH--HHCCCHHHHHHHHH----cCCCCCCCCCCCCCHHHH
Confidence 588888888 88899998888887776665 6688899998 88888888888888 688888888888999999
Q ss_pred HHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCC--CCCCCC
Q 015738 80 AAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYP--YSANNY 157 (401)
Q Consensus 80 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~--~~~~~~ 157 (401)
|+..|+.++|++|+++|+++ +..|..|.||||+|+..++.+++++|+..+.... ...+..
T Consensus 275 A~~~g~~~~v~~LL~~Gad~------------------~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~ 336 (368)
T 3jue_A 275 ATILGHTGLACLFLKRGADL------------------GARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAG 336 (368)
T ss_dssp HHHHTCHHHHHHHHHTTCCT------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------
T ss_pred HHHcCcHHHHHHHHHCcCCC------------------CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCC
Confidence 99888999999999888874 5677888899999998888899888887754321 122334
Q ss_pred CCCHHHHHHh
Q 015738 158 GKTPLYMAAE 167 (401)
Q Consensus 158 ~~t~l~~a~~ 167 (401)
+.|++..+..
T Consensus 337 ~~t~l~i~~~ 346 (368)
T 3jue_A 337 DETYLDIFRD 346 (368)
T ss_dssp ----------
T ss_pred CCCHHHHHHH
Confidence 5566655554
No 110
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.84 E-value=9.5e-21 Score=157.97 Aligned_cols=189 Identities=15% Similarity=0.105 Sum_probs=136.8
Q ss_pred ccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHhcCCchhHHHhhhhhccCCCHHHHHHHHhcC-C
Q 015738 120 VNNEKNTALHEAVSQGNVDVVKILTREDPGYPYSANNYGKTPLYMAAEYENRSDMLRGLLENRTSASFDMVLALLENS-T 198 (401)
Q Consensus 120 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll~~~-~ 198 (401)
.|..+.+.++.+...|+..+.+++...-+.........+....... ..-..+++...- .
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~--------------------~fI~aKYl~~~f~~ 121 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARK--------------------DYITAKYMERRYAR 121 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHH--------------------HHHHHHHTTCTTSC
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHH--------------------HHHHHHHHHhhccc
Confidence 4667889999999999988888776543321111111111111000 111111221111 1
Q ss_pred CCccCCCCCCcHHhHHHhhcccccchHHHHHHhhccc-----ccccccCCCcHHHHHHHc---CCHHHHHHHHhcCcccc
Q 015738 199 SVSHEGPNGKTALHAAAMRSFAVDTALPKLLEKKKNL-----IKETDQYGWTPIHYAAYY---GNYRTVNLLLETDQSAS 270 (401)
Q Consensus 199 ~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ll~~~~~~-----~~~~~~~~~t~L~~a~~~---~~~~~~~~Ll~~~~~~~ 270 (401)
..........++|+.|+.. ++...+..++..+... ++..+..|.||||+|+.. |+.+++++|++.|+++
T Consensus 122 ~~~~~~~~~l~~l~~a~~~--~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i- 198 (278)
T 1dcq_A 122 KKHADTAAKLHSLCEAVKT--RDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL- 198 (278)
T ss_dssp CCSSSHHHHHHHHHHHHHT--TCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-
T ss_pred ccccccchhhhhhhhHhhh--cccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-
Confidence 1111112234689999988 8888888888876553 334478899999999999 8999999999999987
Q ss_pred ccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHh
Q 015738 271 NIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLE 333 (401)
Q Consensus 271 ~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 333 (401)
+..+. .|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..++.+++++|++
T Consensus 199 n~~d~-~g~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~ 259 (278)
T 1dcq_A 199 DKQTG-KGSTALHYCCLTDNAECLKLLLRGKAS-IEIANESGETPLDIAKRLKHEHCEELLTQ 259 (278)
T ss_dssp TCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred cccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCccCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 44444 899999999999999999999999988 78999999999999999999999999999
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.84 E-value=2.2e-22 Score=182.36 Aligned_cols=134 Identities=18% Similarity=0.202 Sum_probs=113.5
Q ss_pred hhhhhhhhcCCCCchhhhhhHHHHHHHH------hhcCCCeeEEeecch---hhhhchHHHHHHHHhhCChhhhcccCCC
Q 015738 3 LNFFKAASAGNSEPFKDMERDVIERLLT------AKAKNTILHINIISS---ERENVSTKFVEEILEKCPALLLQVNAKG 73 (401)
Q Consensus 3 ~~l~~A~~~g~~~~~~~ll~~~~~~~~~------~~~g~t~L~~a~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~g 73 (401)
+.||.|+..|+.+.|+.|++.|.+.+.. +..|.||||+| +. .|+.+++++|++ .|++++.+|..|
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A--~~~a~~g~~~~v~~Ll~----~ga~vn~~d~~g 207 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLA--VKVANQASLPLVDFIIQ----NGGHLDAKAADG 207 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHH--HHTCCTTTHHHHHHHHH----HSCCTTCCCSSS
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHH--HHhcccccHHHHHHHHH----cCCCCCccCCCC
Confidence 4699999999999999999998876555 66799999999 65 899999999999 699999999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHhccCCCChHHHHHHHcCCHHHHHHHHhcCCCCCCC
Q 015738 74 DTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKILTREDPGYPYS 153 (401)
Q Consensus 74 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~ 153 (401)
+||||+||..|+.++|++|+++|+++ +..|..|.||||+|+..|+.+++++|+++|++..
T Consensus 208 ~TpLh~A~~~g~~~~v~~Ll~~ga~~------------------~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~-- 267 (497)
T 3lvq_E 208 NTALHYAALYNQPDCLKLLLKGRALV------------------GTVNEAGETALDIARKKHHKECEELLEQAQAGTF-- 267 (497)
T ss_dssp CCHHHHHTTTTCHHHHHHHHHTCCCC------------------SCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCC------------------CCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCC--
Confidence 99999999999999999999999984 6778899999999999999999999999998854
Q ss_pred CCCCCCCHHHHHHh
Q 015738 154 ANNYGKTPLYMAAE 167 (401)
Q Consensus 154 ~~~~~~t~l~~a~~ 167 (401)
.+|+|.+..
T Consensus 268 -----~~~~h~~~~ 276 (497)
T 3lvq_E 268 -----AFPLHVDYS 276 (497)
T ss_dssp --------------
T ss_pred -----CCcceeecc
Confidence 256776553
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.82 E-value=2.5e-20 Score=134.09 Aligned_cols=109 Identities=24% Similarity=0.212 Sum_probs=98.0
Q ss_pred ccccCCCcHHHHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHH
Q 015738 238 ETDQYGWTPIHYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLH 317 (401)
Q Consensus 238 ~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~ 317 (401)
.+|..|.||||+|+..|+.+++++|++.++++ +..+. .|.||||.|+..++.+++++|++.+++ ++.+|..|+||||
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~tpl~ 80 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSK-DGNTPLHLAAKNGHAEIVKLLLAKGAD-VNARSKDGNTPEH 80 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCS-SSCCTTHHHHTTTCHHHHHHHTTTTCC-TTCCCTTCCCTTH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC-CCCCHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCCHHH
Confidence 46788999999999999999999999999886 33443 789999999999999999999999988 6889999999999
Q ss_pred HHHHhCChhHHHHHHhcCCccccccccCCCCCCcHH
Q 015738 318 YAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPL 353 (401)
Q Consensus 318 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L 353 (401)
+|+..++.+++++|++ .|+++|.++..|.||-
T Consensus 81 ~A~~~~~~~~~~~Ll~----~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 81 LAKKNGHHEIVKLLDA----KGADVNARSWGSSHHH 112 (115)
T ss_dssp HHHTTTCHHHHHHHHT----TSSSHHHHSCCCC---
T ss_pred HHHHCCCHHHHHHHHH----cCCCCCcCCccccccc
Confidence 9999999999999999 8999999999999884
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.75 E-value=4.4e-18 Score=120.89 Aligned_cols=88 Identities=20% Similarity=0.252 Sum_probs=78.9
Q ss_pred CCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhHHHHHHhcCCccccccccCCCCCCcHHHH
Q 015738 276 DRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLARSLIDEGDAEGNTPLHV 355 (401)
Q Consensus 276 ~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~ 355 (401)
..|.||||.|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..++.+++++|++ .|++++.+|..|.||||+
T Consensus 22 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~----~ga~~~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 22 SDLGKKLLEAARAGQDDEVRILMANGAD-VAAKDKNGSTPLHLAARNGHLEVVKLLLE----AGADVXAQDKFGKTAFDI 96 (110)
T ss_dssp CCHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHH
T ss_pred CccchHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCccccccCCCcHHHH
Confidence 4788999999999999999999988877 67888999999999999999999999999 788999999999999999
Q ss_pred HHHhCChhHHHHH
Q 015738 356 LAAVRPKEFHDVM 368 (401)
Q Consensus 356 A~~~~~~~~~~~L 368 (401)
|+..++.+++++|
T Consensus 97 A~~~~~~~~~~~L 109 (110)
T 2zgd_A 97 SIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHh
Confidence 9999999998876
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.73 E-value=1.8e-18 Score=122.86 Aligned_cols=90 Identities=26% Similarity=0.362 Sum_probs=82.8
Q ss_pred HhhcCCCeeEEeecchhhhhchHHHHHHHHhhCChhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhhhhhccCCCCCCCC
Q 015738 30 TAKAKNTILHINIISSERENVSTKFVEEILEKCPALLLQVNAKGDTPLHLAAKFGHFEIVRVLIERAKLAQRGDEEPESG 109 (401)
Q Consensus 30 ~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~ 109 (401)
.+..|.|+||+| +..|+.+++++|++ .+++++.+|..|.||||+||..|+.+++++|+++|++.
T Consensus 20 ~~~~g~t~L~~A--~~~g~~~~v~~Ll~----~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~---------- 83 (110)
T 2zgd_A 20 MGSDLGKKLLEA--ARAGQDDEVRILMA----NGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV---------- 83 (110)
T ss_dssp --CCHHHHHHHH--HHHTCHHHHHHHHH----TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT----------
T ss_pred cCCccchHHHHH--HHcCCHHHHHHHHH----cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc----------
Confidence 445699999999 99999999999998 68999999999999999999999999999999999884
Q ss_pred chhhHHHhHhccCCCChHHHHHHHcCCHHHHHHH
Q 015738 110 VEPFRQMIRMVNNEKNTALHEAVSQGNVDVVKIL 143 (401)
Q Consensus 110 ~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~L 143 (401)
+..|..|.||||+|+..|+.+++++|
T Consensus 84 --------~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 84 --------XAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp --------TCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred --------cccccCCCcHHHHHHHcCCHHHHHHh
Confidence 67788999999999999999999987
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=69.22 E-value=0.65 Score=23.95 Aligned_cols=21 Identities=24% Similarity=0.395 Sum_probs=14.9
Q ss_pred chhhhhhhhcCCCCchhhhhh
Q 015738 2 DLNFFKAASAGNSEPFKDMER 22 (401)
Q Consensus 2 ~~~l~~A~~~g~~~~~~~ll~ 22 (401)
+-.++.||..||.+.++.|-.
T Consensus 14 EQqiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 14 RKQMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHH
Confidence 345677888888888877654
No 116
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=38.86 E-value=1.2e+02 Score=22.57 Aligned_cols=102 Identities=14% Similarity=0.097 Sum_probs=61.2
Q ss_pred HHHHHcCCHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCHHHHHHhhhcCCCCccccCCCCCcHHHHHHHhCChhH
Q 015738 248 HYAAYYGNYRTVNLLLETDQSASNIADKDRKMTALHLAAGKGDARTVERIISGNPKCYELVDNRGCNFLHYAMVSFHVGQ 327 (401)
Q Consensus 248 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~ 327 (401)
..|...|++++++.-...-.+. . ..+.+....|+.+-++.+.+. .....+-+.+++.+...|+++-
T Consensus 42 ~~AL~~gn~~lAe~cy~~~~D~-------~--~L~~Ly~~tg~~e~L~kla~i-----A~~~g~~n~af~~~l~lGdv~~ 107 (177)
T 3mkq_B 42 QEALAQGNASLAEMIYQTQHSF-------D--KLSFLYLVTGDVNKLSKMQNI-----AQTREDFGSMLLNTFYNNSTKE 107 (177)
T ss_dssp HHHHHTTCHHHHHHHHHHTTCH-------H--HHHHHHHHHTCHHHHHHHHHH-----HHHTTCHHHHHHHHHHHTCHHH
T ss_pred HHHHHcCChHHHHHHHHHhCCH-------H--HHHHHHHHhCCHHHHHHHHHH-----HHHCccHHHHHHHHHHcCCHHH
Confidence 3566778888887777654443 1 233444445666655555431 1122233457777777787664
Q ss_pred -HHHHHhcCCccccccccCCCCCCcH--HHHHHHhCChhHHHHHHhhcCCChh
Q 015738 328 -LRNLLENNPLARSLIDEGDAEGNTP--LHVLAAVRPKEFHDVMNRSTQANYD 377 (401)
Q Consensus 328 -~~~Ll~~~~~~~~~~~~~~~~g~t~--L~~A~~~~~~~~~~~Ll~~~~~~~~ 377 (401)
++.|.+ .|+.| ..+|..+|..++.+.+++..|.+..
T Consensus 108 ~i~lL~~--------------~~r~~eA~~~A~t~g~~~~a~~~~~~~~~~~~ 146 (177)
T 3mkq_B 108 RSSIFAE--------------GGSLPLAYAVAKANGDEAAASAFLEQAEVDEQ 146 (177)
T ss_dssp HHHHHHH--------------TTCHHHHHHHHHHTTCHHHHHHHHHHTTCCGG
T ss_pred HHHHHHH--------------CCChHHHHHHHHHcCcHHHHHHHHHHhCCccc
Confidence 455544 34444 4666788999999999887776644
No 117
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=32.99 E-value=1.3e+02 Score=25.19 Aligned_cols=98 Identities=7% Similarity=-0.014 Sum_probs=55.3
Q ss_pred cCCCCchHHHHHHhcCCHHHHHHhhhcCCCC--ccccCCCCCcHHHHHHHhCChhHHHHHHhcCCcc------ccccccC
Q 015738 274 DKDRKMTALHLAAGKGDARTVERIISGNPKC--YELVDNRGCNFLHYAMVSFHVGQLRNLLENNPLA------RSLIDEG 345 (401)
Q Consensus 274 ~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~--~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~------~~~~~~~ 345 (401)
.+..|+-.+..+...+..+..+.+++.-... .-..++.|...+..+...+..+.-+.+++..... ....=..
T Consensus 213 ~d~~Gn~ViQ~~l~~~~~~~~~~i~~~l~~~~~~Ls~~k~gs~Vvek~l~~~~~~~r~~ii~el~~~~~~~~~~l~~l~~ 292 (351)
T 3gvo_A 213 QDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMK 292 (351)
T ss_dssp TSTTHHHHHHHHHHHSCHHHHHHHHHTTTTCHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHHHHSCEETTEEHHHHHHH
T ss_pred CCchHHHHHHHHHHhCchhhHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhCCHHHHHHHHHHHhcccCCCChHHHHccC
Confidence 3447777777788777776666666542211 1124566767777777777665444444421101 0111224
Q ss_pred CCCCCcHHHHHHHhCChhHHHHHHhh
Q 015738 346 DAEGNTPLHVLAAVRPKEFHDVMNRS 371 (401)
Q Consensus 346 ~~~g~t~L~~A~~~~~~~~~~~Ll~~ 371 (401)
|..|+-.+..+......+-.+.++..
T Consensus 293 d~ygnyViq~~L~~~~~~~r~~i~~~ 318 (351)
T 3gvo_A 293 DQYANYVVQKMIDMAEPAQRKIIMHK 318 (351)
T ss_dssp STTHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CcchHHHHHHHHHhCCHHHHHHHHHH
Confidence 67777777777777765554444433
No 118
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=28.02 E-value=1.5e+02 Score=25.51 Aligned_cols=23 Identities=17% Similarity=0.164 Sum_probs=12.4
Q ss_pred CCchHHHHHHhcCCHHHHHHhhh
Q 015738 277 RKMTALHLAAGKGDARTVERIIS 299 (401)
Q Consensus 277 ~g~t~L~~a~~~~~~~~~~~Ll~ 299 (401)
.|.|.+|+|++..+.+++..|+.
T Consensus 68 ~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 68 VGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHH
T ss_pred cCchhhhhhhhhhhhhHHHHhhh
Confidence 45555555555555555555543
No 119
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=23.85 E-value=1.3e+02 Score=25.23 Aligned_cols=96 Identities=9% Similarity=0.094 Sum_probs=57.8
Q ss_pred ccccCCCcHHHHHHHcCCHHHHHHHHhcCc-cccccccCCCCchHHHHHHhcCCHH----HHHHhhhc--CCC---Cccc
Q 015738 238 ETDQYGWTPIHYAAYYGNYRTVNLLLETDQ-SASNIADKDRKMTALHLAAGKGDAR----TVERIISG--NPK---CYEL 307 (401)
Q Consensus 238 ~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~-~~~~~~~~~~g~t~L~~a~~~~~~~----~~~~Ll~~--~~~---~~~~ 307 (401)
..|.+|+-.+......+..+..+.+++.-. ..........|...+..+...+..+ +++.++.. ++. ..-.
T Consensus 212 ~~d~~Gn~ViQ~~l~~~~~~~~~~i~~~l~~~~~~Ls~~k~gs~Vvek~l~~~~~~~r~~ii~el~~~~~~~~~~l~~l~ 291 (351)
T 3gvo_A 212 VQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMM 291 (351)
T ss_dssp HTSTTHHHHHHHHHHHSCHHHHHHHHHTTTTCHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHHHHSCEETTEEHHHHHH
T ss_pred CCCchHHHHHHHHHHhCchhhHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhCCHHHHHHHHHHHhcccCCCChHHHHcc
Confidence 356777777777777777666666655321 2223344456767777777766654 34444431 110 1124
Q ss_pred cCCCCCcHHHHHHHhCChhHHHHHHh
Q 015738 308 VDNRGCNFLHYAMVSFHVGQLRNLLE 333 (401)
Q Consensus 308 ~~~~g~t~l~~A~~~~~~~~~~~Ll~ 333 (401)
+|..|+-.+..+...+..+.-+.+++
T Consensus 292 ~d~ygnyViq~~L~~~~~~~r~~i~~ 317 (351)
T 3gvo_A 292 KDQYANYVVQKMIDMAEPAQRKIIMH 317 (351)
T ss_dssp HSTTHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCcchHHHHHHHHHhCCHHHHHHHHH
Confidence 68889888888888777776666665
No 120
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=23.44 E-value=57 Score=27.92 Aligned_cols=61 Identities=15% Similarity=0.096 Sum_probs=42.2
Q ss_pred HHHcCCHHHHHHHHHhhhhhccCCCCCCCCchhhHHHhHh--ccCCCChHHHHHHHcCCHHHHHHHHhc
Q 015738 80 AAKFGHFEIVRVLIERAKLAQRGDEEPESGVEPFRQMIRM--VNNEKNTALHEAVSQGNVDVVKILTRE 146 (401)
Q Consensus 80 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 146 (401)
.+..|+...|+.-+..|.++...-.. ....+++. .-.-|.|.+|+|++..+.+++..|+..
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r~lt~------~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIARQLTA------DEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCCCH------HHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHcCChhHHHHHHhcCCchhcccCH------HHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhc
Confidence 34678999999888888776433221 11111221 134689999999999999999999863
No 121
>3k49_A MRNA-binding protein PUF3; PUF3, pumilio, RNA binding, mitochondrial mRNA,, membrane, mitochondrion; HET: CIT; 2.50A {Saccharomyces cerevisiae} SCOP: a.118.1.0 PDB: 3k4e_A
Probab=20.54 E-value=3.8e+02 Score=22.51 Aligned_cols=129 Identities=10% Similarity=0.057 Sum_probs=62.3
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHhcCc-cccccccCCCCchHHHHHHhcCCH----------HHHHHhhhcCCCCcccc
Q 015738 240 DQYGWTPIHYAAYYGNYRTVNLLLETDQ-SASNIADKDRKMTALHLAAGKGDA----------RTVERIISGNPKCYELV 308 (401)
Q Consensus 240 ~~~~~t~L~~a~~~~~~~~~~~Ll~~~~-~~~~~~~~~~g~t~L~~a~~~~~~----------~~~~~Ll~~~~~~~~~~ 308 (401)
+.+|...+..+...+..+.-+.+++.-. .......+..|+-.+..+...+.. .+++.+..+-.. -..
T Consensus 183 ~~~Gs~Vvq~~l~~~~~~~~~~i~~~l~~~~~~L~~d~~GnyViQ~~l~~~~~~~~~~~~~~~~i~~~l~~~~~~--Ls~ 260 (369)
T 3k49_A 183 HSYGCRVIQRLLEFGSSEDQESILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANNVVE--YSK 260 (369)
T ss_dssp STTHHHHHHHHHHHSCHHHHHHHHHTTTTCHHHHHHSTTHHHHHHHHHTCCTTSCHHHHHHHHHHHHHHHTTHHH--HHT
T ss_pred CCccCcHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhcCCchhhhhHhHHHHHHHHHHHHHHH--HHh
Confidence 3445455555555555444444433211 111222233555555555555432 223333222111 124
Q ss_pred CCCCCcHHHHHHHhCChhHHHHHHhcCCcccc------------ccccCCCCCCcHHHHHHHhCChhHHHHHHh
Q 015738 309 DNRGCNFLHYAMVSFHVGQLRNLLENNPLARS------------LIDEGDAEGNTPLHVLAAVRPKEFHDVMNR 370 (401)
Q Consensus 309 ~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~------------~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 370 (401)
++.|...+..+...+..+.-+.+++....... ..=..|..|+-.+..+......+..+.|+.
T Consensus 261 ~k~gS~Vvek~l~~~~~~~r~~ii~~l~~~~~~~~~~~~~~~~l~~L~~D~~gNyViq~~l~~~~~~~~~~l~~ 334 (369)
T 3k49_A 261 HKFASNVVEKSILYGSKNQKDLIISKILPRDKNHALNLEDDSPMILMIKDQFANYVIQKLVNVSEGEGKKLIVI 334 (369)
T ss_dssp STTHHHHHHHHHHHSCHHHHHHHHTTTSCSSHHHHHTCCTTSHHHHHHTSTTHHHHHHHHHHHCCHHHHHHHHH
T ss_pred hhHhhHHHHHHHHhCCHHHHHHHHHHHhccccccccccccccHHHHHHhCcchHHHHHHHHHhCCHHHHHHHHH
Confidence 56676777777777777777777664322110 011246667667777766666555444443
Done!