Your job contains 1 sequence.
>015744
MYHHHQNQGKSMHSSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFI
EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGNNKIGPVTV
PGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQG
KYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNSTFSDLKELQGFCPQQ
PQANQPTDCSMDSCLTSCEGSQKDQEIHNGGVRLRPYHGTPTLEPKEIVEEPMLQQTELK
WRKDLKESKFLSSIGKDRGPGELSIGSGSFPAGRFKASNEDEHFQDQTNKKPEGAKLENE
NLLPEYRLPCFSTKLDLNAHDHENDVASGCKQFDLNGFSWN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015744
(401 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2095933 - symbol:MYR2 species:3702 "Arabidopsi... 1185 2.0e-120 1
TAIR|locus:2172394 - symbol:MYR1 "myb-related protein 1" ... 1145 3.4e-116 1
TAIR|locus:2026739 - symbol:AT1G69580 species:3702 "Arabi... 534 1.9e-51 1
TAIR|locus:2119425 - symbol:UNE16 "unfertilized embryo sa... 516 1.5e-49 1
TAIR|locus:2093726 - symbol:AT3G24120 species:3702 "Arabi... 503 3.7e-48 1
TAIR|locus:2206415 - symbol:APL "ALTERED PHLOEM DEVELOPME... 461 1.0e-43 1
TAIR|locus:2157146 - symbol:AT5G45580 species:3702 "Arabi... 380 4.0e-35 1
TAIR|locus:2045761 - symbol:AT2G01060 species:3702 "Arabi... 364 2.0e-33 1
TAIR|locus:2087740 - symbol:AT3G12730 species:3702 "Arabi... 362 3.2e-33 1
TAIR|locus:2139865 - symbol:PHR1 "phosphate starvation re... 355 1.8e-32 1
TAIR|locus:2170199 - symbol:AT5G06800 species:3702 "Arabi... 332 2.6e-32 2
TAIR|locus:2148720 - symbol:PHL1 "AT5G29000" species:3702... 351 4.7e-32 1
TAIR|locus:2100880 - symbol:AT3G04450 species:3702 "Arabi... 340 6.9e-31 1
TAIR|locus:2038957 - symbol:AT2G20400 "AT2G20400" species... 326 2.1e-29 1
TAIR|locus:2089260 - symbol:AT3G13040 species:3702 "Arabi... 317 1.9e-28 1
TAIR|locus:2041539 - symbol:AT2G42660 "AT2G42660" species... 194 8.5e-15 1
TAIR|locus:2204518 - symbol:AT1G14600 "AT1G14600" species... 189 3.0e-14 1
TAIR|locus:2051572 - symbol:AT2G06020 "AT2G06020" species... 199 7.3e-14 1
TAIR|locus:2042927 - symbol:AT2G38300 "AT2G38300" species... 199 1.7e-13 1
TAIR|locus:2058445 - symbol:MYBC1 "AT2G40970" species:370... 182 1.8e-13 1
TAIR|locus:2041145 - symbol:AT2G02060 species:3702 "Arabi... 186 1.9e-13 1
TAIR|locus:2103247 - symbol:AT3G10760 "AT3G10760" species... 190 1.8e-12 1
TAIR|locus:2148348 - symbol:BOA "AT5G59570" species:3702 ... 186 2.9e-12 1
TAIR|locus:2063141 - symbol:AT2G40260 "AT2G40260" species... 189 4.6e-12 1
TAIR|locus:2125771 - symbol:AT4G04580 "AT4G04580" species... 169 4.7e-12 1
TAIR|locus:2171427 - symbol:KAN "KANADI" species:3702 "Ar... 184 1.7e-11 2
TAIR|locus:2163852 - symbol:ATS "AT5G42630" species:3702 ... 176 3.0e-11 1
TAIR|locus:2093668 - symbol:RR1 "response regulator 1" sp... 183 6.0e-11 1
TAIR|locus:2028346 - symbol:KAN2 "AT1G32240" species:3702... 178 7.1e-11 1
TAIR|locus:2175364 - symbol:AT5G05090 "AT5G05090" species... 171 9.6e-11 1
UNIPROTKB|Q0J235 - symbol:RL9 "Probable transcription fac... 177 1.8e-10 1
TAIR|locus:505006489 - symbol:KAN3 "AT4G17695" species:37... 172 1.9e-10 1
TAIR|locus:2130095 - symbol:RR2 "response regulator 2" sp... 175 4.4e-10 1
TAIR|locus:2063746 - symbol:AT2G03500 "AT2G03500" species... 171 5.7e-10 1
TAIR|locus:2065398 - symbol:RR14 "response regulator 14" ... 169 7.1e-10 1
TAIR|locus:2085984 - symbol:AT3G25790 species:3702 "Arabi... 163 2.9e-09 1
TAIR|locus:2031210 - symbol:AT1G25550 species:3702 "Arabi... 162 3.4e-09 1
TAIR|locus:2167639 - symbol:GLK2 "AT5G44190" species:3702... 163 3.5e-09 1
UNIPROTKB|Q5Z5I4 - symbol:GLK1 "Probable transcription fa... 164 3.8e-09 1
TAIR|locus:2026863 - symbol:AT1G68670 species:3702 "Arabi... 157 1.4e-08 1
TAIR|locus:2010297 - symbol:AT1G49560 "AT1G49560" species... 150 7.2e-08 1
TAIR|locus:2115070 - symbol:AT4G37180 species:3702 "Arabi... 150 8.8e-08 1
TAIR|locus:2205339 - symbol:HRS1 "HYPERSENSITIVITY TO LOW... 149 1.0e-07 1
TAIR|locus:2008585 - symbol:ARR11 "response regulator 11"... 154 1.1e-07 2
TAIR|locus:2040194 - symbol:RR12 "response regulator 12" ... 152 1.7e-07 2
UNIPROTKB|Q7Y0W3 - symbol:Q7Y0W3 "Two-component response ... 142 6.1e-07 1
UNIPROTKB|Q7Y0W5 - symbol:EHD1 "Two-component response re... 142 6.1e-07 1
TAIR|locus:2141020 - symbol:APRR2 species:3702 "Arabidops... 142 1.4e-06 1
TAIR|locus:2116587 - symbol:RR10 "response regulator 10" ... 137 5.3e-06 1
>TAIR|locus:2095933 [details] [associations]
symbol:MYR2 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 HSSP:O49397 HOGENOM:HOG000239390 InterPro:IPR025756
InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC011698
ProtClustDB:CLSN2686543 IPI:IPI00524229 RefSeq:NP_001118567.1
UniGene:At.40915 ProteinModelPortal:Q9SQQ9 SMR:Q9SQQ9
EnsemblPlants:AT3G04030.3 GeneID:819558 KEGG:ath:AT3G04030
TAIR:At3g04030 InParanoid:Q9SQQ9 OMA:HITSERH PhylomeDB:Q9SQQ9
Genevestigator:Q9SQQ9 Uniprot:Q9SQQ9
Length = 394
Score = 1185 (422.2 bits), Expect = 2.0e-120, P = 2.0e-120
Identities = 255/411 (62%), Positives = 302/411 (73%)
Query: 1 MYHHHQNQGKSMHSSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFI 60
MY+ +Q+QGK++ SSSRM I +ERH FL+G S PGDSGL+LSTDAKPRLKWTPDLHERFI
Sbjct: 1 MYYQNQHQGKNILSSSRMHITSERHPFLRGNS-PGDSGLILSTDAKPRLKWTPDLHERFI 59
Query: 61 EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGNNKIGPVTV 120
EAVNQLGGADKATPKT+MK+MGIPGLTLYHLKSHLQKYRLSKNL+GQAN NKIG +T+
Sbjct: 60 EAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSHLQKYRLSKNLNGQANNSFNKIGIMTM 119
Query: 121 PGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQG 180
E+ P+A+ NLSIGPQPNK+ I E +QMQIEVQRRLHEQLEVQRHLQLRIEAQG
Sbjct: 120 MEEKTPDADEIQSENLSIGPQPNKNSPIGEALQMQIEVQRRLHEQLEVQRHLQLRIEAQG 179
Query: 181 KYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNSTFSDLKELQGFCPQQ 240
KYLQ+VLEKAQETLGRQNLG AG+EAAKVQLSELVSKVS + NS+F + KELQ C QQ
Sbjct: 180 KYLQSVLEKAQETLGRQNLGAAGIEAAKVQLSELVSKVSAEYPNSSFLEPKELQNLCSQQ 239
Query: 241 PQANQPTDCSMDSCLTSCEGSQKDQE-IHNGGVRLRPYHGTPTLEPKEIVEEPMLQQTEL 299
Q N P DCS++SCLTS EG+QK+ + + N + LR Y G T E KEI+EEP+ Q+ EL
Sbjct: 240 MQTNYPPDCSLESCLTSSEGTQKNSKMLENNRLGLRTYIGDSTSEQKEIMEEPLFQRMEL 299
Query: 300 KWRKDLKESKFLSSIGKD---------RGPGELSIGSGSFPAGRFKASNEDEHFQDQTNK 350
W + L+ + +LS++ + R PG LSIG G ++ +H Q N
Sbjct: 300 TWTEGLRGNPYLSTMVSEAEQRISYSERSPGRLSIGVGLH-------GHKSQH--QQGNN 350
Query: 351 KPEGAKLENENLLPEYRLPCFSTKLDLNAHDHENDVASGCKQFDLNGFSWN 401
E KLE N + +T+LDLN H EN + KQFDLNGFSWN
Sbjct: 351 --EDHKLETRNR----KGMDSTTELDLNTHV-ENYCTTRTKQFDLNGFSWN 394
>TAIR|locus:2172394 [details] [associations]
symbol:MYR1 "myb-related protein 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 EMBL:CP002688 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB012246
HSSP:O49397 InterPro:IPR025756 InterPro:IPR017930
InterPro:IPR006447 Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294
IPI:IPI00538966 RefSeq:NP_197325.1 RefSeq:NP_974798.1
UniGene:At.7556 ProteinModelPortal:Q9FK47 SMR:Q9FK47
EnsemblPlants:AT5G18240.1 EnsemblPlants:AT5G18240.4 GeneID:831942
KEGG:ath:AT5G18240 TAIR:At5g18240 InParanoid:Q9FK47 OMA:LETHTRT
PhylomeDB:Q9FK47 ProtClustDB:CLSN2686543 Genevestigator:Q9FK47
Uniprot:Q9FK47
Length = 402
Score = 1145 (408.1 bits), Expect = 3.4e-116, P = 3.4e-116
Identities = 246/415 (59%), Positives = 298/415 (71%)
Query: 1 MYHHHQNQGKSMHSSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFI 60
MY+H+Q+QGKS+ SSSRMPI +ERH FL+G +G GDSGL+LSTDAKPRLKWTPDLHERF+
Sbjct: 1 MYYHNQHQGKSILSSSRMPISSERHPFLRG-NGTGDSGLILSTDAKPRLKWTPDLHERFV 59
Query: 61 EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGNNKIGPVTV 120
EAVNQLGG DKATPKT+MK+MGIPGLTLYHLKSHLQKYRLSKNL+GQAN NK +T+
Sbjct: 60 EAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSHLQKYRLSKNLNGQANSSLNKTSVMTM 119
Query: 121 PGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQG 180
E PE + +H +LSIGPQP+ +L IS+ +QMQIEVQRRLHEQLEVQRHLQLRIEAQG
Sbjct: 120 VEENPPEVDESHSESLSIGPQPSMNLPISDALQMQIEVQRRLHEQLEVQRHLQLRIEAQG 179
Query: 181 KYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNSTFSDLKELQGFCPQQ 240
KYLQ++LEKAQETLGRQNLG AG+EA K QLSELVSKVS +S+F + KELQ QQ
Sbjct: 180 KYLQSILEKAQETLGRQNLGAAGIEATKAQLSELVSKVSADYPDSSFLEPKELQNLHHQQ 239
Query: 241 PQANQPTDCSMDSCLTSCEGSQKDQEIHNGGVRLRPYHGTPTLEPKEIVEEPMLQQTELK 300
Q P + S+DSCLTS EG+QK ++ + + LR Y G T E KEI+EEP + EL
Sbjct: 240 MQKTYPPNSSLDSCLTSSEGTQKAPKMLDNRLGLRTYIGDSTSEQKEIMEEPFFHRMELT 299
Query: 301 WRKD--LKESK---FLSSIGKD---------RGPGELSIGSGSFPAGRFKASNEDEHFQD 346
W ++ L+E+ +LS++ + R PG LSIG G R ++SN E+ ++
Sbjct: 300 WAEEESLRENHNRPYLSTMVNNAEPRISSSRRSPGRLSIGVG-LHEHRGRSSNNSEYTEE 358
Query: 347 QTNKKPEGAKLENENLLPEYRLPCFSTKLDLNAHDHENDVASGCKQFDLNGFSWN 401
+ N+ E KLE T LDLN HD EN + KQFDLNGFSWN
Sbjct: 359 RFNENNEDCKLETHT----------RTALDLNTHD-ENYGTTRPKQFDLNGFSWN 402
>TAIR|locus:2026739 [details] [associations]
symbol:AT1G69580 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002684 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000239390
InterPro:IPR025756 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 EMBL:AC021046 IPI:IPI00846148
RefSeq:NP_001077798.1 UniGene:At.52449 ProteinModelPortal:A8MSE5
SMR:A8MSE5 PRIDE:A8MSE5 EnsemblPlants:AT1G69580.2 GeneID:843294
KEGG:ath:AT1G69580 TAIR:At1g69580 eggNOG:NOG249461 OMA:MEINNNA
PhylomeDB:A8MSE5 ProtClustDB:CLSN2699064 ArrayExpress:A8MSE5
Genevestigator:A8MSE5 Uniprot:A8MSE5
Length = 337
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 118/243 (48%), Positives = 162/243 (66%)
Query: 39 LVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKY 98
LVLSTDAKPRLKWT DLH +FIEAVNQLGG +KATPK +MK+M IPGLTLYHLKSHLQKY
Sbjct: 27 LVLSTDAKPRLKWTCDLHHKFIEAVNQLGGPNKATPKGLMKVMEIPGLTLYHLKSHLQKY 86
Query: 99 RLSKNLHGQANIGNNKIGPVTVPGERMPEANATHMNNLSI-----GPQPNKSLHISETIQ 153
RL K++ N ++ + E + ++ + S+ P ++ L I+E +Q
Sbjct: 87 RLGKSMKFDDN--KLEVSSASENQEVESKNDSRDLRGCSVTEENSNPAKDRGLQITEALQ 144
Query: 154 MQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSE 213
MQ+EVQ++LHEQ+EVQRHLQ++IEAQGKYLQ+VL KAQ+TL + G++ A+ +LS
Sbjct: 145 MQMEVQKKLHEQIEVQRHLQVKIEAQGKYLQSVLMKAQQTLAGYSSSNLGMDFARTELSR 204
Query: 214 LVSKVSTQCLNSTFSDL----KELQGFCPQQPQANQPTD---CSMDSCLTSCEGSQKDQE 266
L S V+ C +++FS+L +E +GF + N+ CS++S LTS E S+ +
Sbjct: 205 LASMVNRGCPSTSFSELTQVEEEEEGFLWYKKPENRGISQLRCSVESSLTSSETSETKLD 264
Query: 267 IHN 269
N
Sbjct: 265 TDN 267
>TAIR|locus:2119425 [details] [associations]
symbol:UNE16 "unfertilized embryo sac 16" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009567 "double fertilization forming a
zygote and endosperm" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 EMBL:CP002687 GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0009567
IPI:IPI00657591 RefSeq:NP_001031626.1 UniGene:At.22199
ProteinModelPortal:F4JTR5 SMR:F4JTR5 PRIDE:F4JTR5
EnsemblPlants:AT4G13640.2 GeneID:826998 KEGG:ath:AT4G13640
OMA:LPIDACL PhylomeDB:F4JTR5 Uniprot:F4JTR5
Length = 295
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 122/257 (47%), Positives = 166/257 (64%)
Query: 12 MHSSSRMPIPTERHL--FLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGA 69
M+S+ R +P + L + G + P D+ LVL+TD KPRL+WT +LHERF++AV QLGG
Sbjct: 1 MYSAIRSSLPLDGSLGDYSDGTNLPIDACLVLTTDPKPRLRWTSELHERFVDAVTQLGGP 60
Query: 70 DKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGNNKIGPVTVPGERMPEAN 129
DKATPKT+M+ MG+ GLTLYHLKSHLQK+RL + + +I N+K V+ E +
Sbjct: 61 DKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQ-SCKESIDNSK--DVSCVAESQ-DTG 116
Query: 130 ATHMNNLSIGPQP-NKSLHISETIQMQIEVQRRLHEQLE---VQRHLQLRIEAQGKYLQA 185
++ ++L + Q N+S ++E ++ Q+EVQRRLHEQLE VQR LQLRIEAQGKYLQ+
Sbjct: 117 SSSTSSLRLAAQEQNESYQVTEALRAQMEVQRRLHEQLEYTQVQRRLQLRIEAQGKYLQS 176
Query: 186 VLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVST----QCLNSTFSDLKELQGFCPQQP 241
+LEKA + + Q + AGLEAA+ +LSEL K S Q STF K + +
Sbjct: 177 ILEKACKAIEEQAVAFAGLEAAREELSELAIKASITNGCQGTTSTFDTTKMMIPSLSELA 236
Query: 242 QA-NQPTDCSMDSCLTS 257
A +CS +S LTS
Sbjct: 237 VAIEHKNNCSAESSLTS 253
>TAIR|locus:2093726 [details] [associations]
symbol:AT3G24120 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] [GO:0010048 "vernalization
response" evidence=RCA] [GO:0048573 "photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002686 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR025756
InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00531757
RefSeq:NP_974356.1 UniGene:At.26588 ProteinModelPortal:F4J5D9
SMR:F4J5D9 EnsemblPlants:AT3G24120.2 GeneID:821998
KEGG:ath:AT3G24120 OMA:NLPGDAC PhylomeDB:F4J5D9 Uniprot:F4J5D9
Length = 298
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 115/243 (47%), Positives = 157/243 (64%)
Query: 28 LQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLT 87
L G + PGD+ LVL+TD KPRL+WT +LHERF++AV QLGG DKATPKT+M+ MG+ GLT
Sbjct: 23 LDGTNLPGDACLVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLT 82
Query: 88 LYHLKSHLQKYRLSKNLHGQANIGNNKIGPVTVPGERMPEANATHMNNLSIGPQPNKSLH 147
LYHLKSHLQK+RL + G+ + N+K + GE +++ + + N+
Sbjct: 83 LYHLKSHLQKFRLGRQA-GKESTENSK--DASCVGESQDTGSSSTSSMRMAQQEQNEGYQ 139
Query: 148 ISETIQMQIEVQRRLHEQLE---VQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGTAGL 204
++E ++ Q+EVQRRLH+QLE VQR LQLRIEAQGKYLQ++LEKA + Q AGL
Sbjct: 140 VTEALRAQMEVQRRLHDQLEYGQVQRRLQLRIEAQGKYLQSILEKACKAFDEQAATFAGL 199
Query: 205 EAAKVQLSELVSKVS--TQCLNSTFSDLKELQGFCPQQPQA--------NQPTDCSMDSC 254
EAA+ +LSEL KVS +Q + + D ++ P + N T+CS++S
Sbjct: 200 EAAREELSELAIKVSNSSQGTSVPYFDATKMM-MMPSLSELAVAIDNKNNITTNCSVESS 258
Query: 255 LTS 257
LTS
Sbjct: 259 LTS 261
>TAIR|locus:2206415 [details] [associations]
symbol:APL "ALTERED PHLOEM DEVELOPMENT" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010088 "phloem development"
evidence=IMP] [GO:0010089 "xylem development" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0010089 EMBL:AC007202 EMBL:AY045662 EMBL:AY143841
EMBL:AK316719 IPI:IPI00538563 IPI:IPI00542908 PIR:D96825
RefSeq:NP_565209.1 RefSeq:NP_849905.1 UniGene:At.23550 HSSP:O49397
ProteinModelPortal:Q9SAK5 SMR:Q9SAK5 IntAct:Q9SAK5 STRING:Q9SAK5
PRIDE:Q9SAK5 EnsemblPlants:AT1G79430.2 GeneID:844281
KEGG:ath:AT1G79430 TAIR:At1g79430 eggNOG:NOG261203
HOGENOM:HOG000239390 InParanoid:Q94AW3 OMA:CQTLAGE PhylomeDB:Q9SAK5
ProtClustDB:CLSN2689327 Genevestigator:Q9SAK5 GO:GO:0010088
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 Uniprot:Q9SAK5
Length = 358
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 98/173 (56%), Positives = 125/173 (72%)
Query: 35 GDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSH 94
GDSGLVL+TD KPRL+WT +LHERF++AV QLGG DKATPKT+M++MG+ GLTLYHLKSH
Sbjct: 23 GDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSH 82
Query: 95 LQKYRLSKNLHGQANIGNNKIGPVTVPGERMPEANATHMNNLSIGPQPNKSLHISETIQM 154
LQK+RL K H + G++ T G R A N S +++++ +M
Sbjct: 83 LQKFRLGKQPHKE--YGDHS----TKEGSRA-SAMDIQRNVASSSGMMSRNMN-----EM 130
Query: 155 QIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGTAGLEAA 207
Q+EVQRRLHEQLEVQRHLQLRIEAQGKY+Q++LE+A +TL +N+ A AA
Sbjct: 131 QMEVQRRLHEQLEVQRHLQLRIEAQGKYMQSILERACQTLAGENMAAATAAAA 183
>TAIR|locus:2157146 [details] [associations]
symbol:AT5G45580 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002688 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR025756
InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00931042
RefSeq:NP_199371.2 UniGene:At.50506 ProteinModelPortal:F4KEK2
SMR:F4KEK2 PRIDE:F4KEK2 DNASU:834596 EnsemblPlants:AT5G45580.1
GeneID:834596 KEGG:ath:AT5G45580 OMA:YQIEVQR Uniprot:F4KEK2
Length = 264
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 83/177 (46%), Positives = 118/177 (66%)
Query: 40 VLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYR 99
+++ D KPRL+WT DLH+RF++AV +LGGADKATPK+V+KLMG+ GLTLYHLKSHLQKYR
Sbjct: 1 MMTRDPKPRLRWTADLHDRFVDAVAKLGGADKATPKSVLKLMGLKGLTLYHLKSHLQKYR 60
Query: 100 LSKNLHGQAN-IGNNK--IGPVTVPGERMPEANATHMNNLSIGPQPNKSLHISETIQMQI 156
L + + N NK G V + + ++ + + + ++ +E ++ Q+
Sbjct: 61 LGQQQGKKQNRTEQNKENAGSSYVHFDNCSQGGISNDSRFDNHQRQSGNVPFAEAMRHQV 120
Query: 157 EVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSE 213
+ Q+R EQLEVQ+ LQ+R+EAQGKYL +LEKAQ++L G AG E K Q S+
Sbjct: 121 DAQQRFQEQLEVQKKLQMRMEAQGKYLLTLLEKAQKSLP---CGNAG-ETDKGQFSD 173
>TAIR|locus:2045761 [details] [associations]
symbol:AT2G01060 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0006499 "N-terminal protein myristoylation"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=RCA]
[GO:0016558 "protein import into peroxisome matrix" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 HOGENOM:HOG000239390
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC006837
EMBL:AF370550 EMBL:AY084725 EMBL:BT000013 IPI:IPI00544604
PIR:B84420 RefSeq:NP_178216.1 UniGene:At.24449
ProteinModelPortal:Q9SJW0 SMR:Q9SJW0 EnsemblPlants:AT2G01060.1
GeneID:814630 KEGG:ath:AT2G01060 TAIR:At2g01060 eggNOG:NOG329415
InParanoid:Q9SJW0 OMA:TNELHER PhylomeDB:Q9SJW0
ProtClustDB:CLSN2683513 ArrayExpress:Q9SJW0 Genevestigator:Q9SJW0
Uniprot:Q9SJW0
Length = 286
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 80/161 (49%), Positives = 112/161 (69%)
Query: 36 DSGLVLSTDA-KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSH 94
D+G S+ A K RL+WT +LHERF++AV QLGG D+ATPK V+++MG+ GLT+YH+KSH
Sbjct: 4 DNGGPNSSHASKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSH 63
Query: 95 LQKYRLSKNLHGQANIGNNKIGPVTVPGERMPEANATHMNNLSIGPQPNKSLHISETIQM 154
LQKYRL+K L ++ G++ + + M LS G + + I+E +++
Sbjct: 64 LQKYRLAKYLPDSSS-----------EGKKTDKKESGDM--LS-GLDGSSGMQITEALKL 109
Query: 155 QIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLG 195
Q+EVQ+RLHEQLEVQR LQLRIEAQGKYL+ ++E+ Q G
Sbjct: 110 QMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSG 150
>TAIR|locus:2087740 [details] [associations]
symbol:AT3G12730 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 HOGENOM:HOG000239390
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AY070764
EMBL:AY143916 IPI:IPI00519091 RefSeq:NP_187879.2 UniGene:At.28330
ProteinModelPortal:Q8VYI2 SMR:Q8VYI2 EnsemblPlants:AT3G12730.1
GeneID:820455 KEGG:ath:AT3G12730 TAIR:At3g12730 eggNOG:NOG317938
InParanoid:Q8VYI2 OMA:CETQEAS PhylomeDB:Q8VYI2
ProtClustDB:CLSN2917937 Genevestigator:Q8VYI2 Uniprot:Q8VYI2
Length = 235
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 79/159 (49%), Positives = 109/159 (68%)
Query: 37 SGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQ 96
SGLVL+TD KPRL+WT +LHERF++AV LGG +KATPKT+M++MG+ GLTLYHLKSHLQ
Sbjct: 14 SGLVLTTDPKPRLRWTTELHERFVDAVTHLGGPEKATPKTIMRVMGVKGLTLYHLKSHLQ 73
Query: 97 KYRLSKNLHGQANIGNNKIGPVTVPGERMPEANATHMNNLSIGPQPNKS-LHISETI-QM 154
K+RL K H + + N+ I + + N M +L S L I + +M
Sbjct: 74 KFRLGKQPHKEHS-QNHSIC--------IRDTNRASMLDLRRNAVFTTSPLIIGRNMNEM 124
Query: 155 QIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQET 193
Q+EVQRR+ E++ ++R + RI AQGKY++++LEKA ET
Sbjct: 125 QMEVQRRIEEEVVIERQVNQRIAAQGKYMESMLEKACET 163
>TAIR|locus:2139865 [details] [associations]
symbol:PHR1 "phosphate starvation response 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016036 "cellular response to phosphate starvation"
evidence=IMP] [GO:0055063 "sulfate ion homeostasis" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=IEP] [GO:0071486 "cellular
response to high light intensity" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634 EMBL:CP002687
GO:GO:0003677 GO:GO:0007623 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0016036 HSSP:O49397
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0071486
HOGENOM:HOG000064669 EMBL:AY081290 EMBL:BT002187 EMBL:AJ310799
IPI:IPI00520685 RefSeq:NP_194590.2 UniGene:At.4525
ProteinModelPortal:Q94CL7 SMR:Q94CL7 PaxDb:Q94CL7 PRIDE:Q94CL7
EnsemblPlants:AT4G28610.1 GeneID:828979 KEGG:ath:AT4G28610
TAIR:At4g28610 eggNOG:NOG275307 InParanoid:Q94CL7 OMA:EKQCKSG
PhylomeDB:Q94CL7 ProtClustDB:CLSN2915055 Genevestigator:Q94CL7
GO:GO:0055063 Uniprot:Q94CL7
Length = 409
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 78/197 (39%), Positives = 121/197 (61%)
Query: 46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLH 105
K R++WTP+LHE F+EAVN LGG+++ATPK V+K+M + GLT+YH+KSHLQKYR ++
Sbjct: 225 KARMRWTPELHEAFVEAVNSLGGSERATPKGVLKIMKVEGLTIYHVKSHLQKYRTARYRP 284
Query: 106 GQANIGNNKIGPVTVPGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQ 165
+ G+ P ++ H+ +L + + I+E +++Q+EVQ++LHEQ
Sbjct: 285 EPSETGS--------PERKLTPLE--HITSLDL----KGGIGITEALRLQMEVQKQLHEQ 330
Query: 166 LEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNS 225
LE+QR+LQLRIE QGKYLQ + EK L + T+ AAK + + + S +
Sbjct: 331 LEIQRNLQLRIEEQGKYLQMMFEKQNSGLTKGTASTSD-SAAKSEQEDKKTADSKEVPEE 389
Query: 226 TFSDLKELQGFCPQQPQ 242
+EL+ P++P+
Sbjct: 390 ETRKCEELESPQPKRPK 406
>TAIR|locus:2170199 [details] [associations]
symbol:AT5G06800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR025756
InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AK226644 IPI:IPI00528070
RefSeq:NP_196298.2 UniGene:At.50439 ProteinModelPortal:Q0WVU3
SMR:Q0WVU3 PRIDE:Q0WVU3 EnsemblPlants:AT5G06800.1 GeneID:830570
KEGG:ath:AT5G06800 TAIR:At5g06800 eggNOG:NOG298644
HOGENOM:HOG000241107 InParanoid:Q0WVU3 OMA:MDNINFE
ProtClustDB:CLSN2918619 Genevestigator:Q0WVU3 Uniprot:Q0WVU3
Length = 375
Score = 332 (121.9 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 69/147 (46%), Positives = 98/147 (66%)
Query: 46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLH 105
K R++WT DLHE+F+E VN+LGGADKATPK ++K M GLT++H+KSHLQKYR++K +
Sbjct: 192 KTRIRWTQDLHEKFVECVNRLGGADKATPKAILKRMDSDGLTIFHVKSHLQKYRIAKYM- 250
Query: 106 GQANIGNNKIGPVTVPGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQ 165
P + G+ A A ++ L + I E +Q+Q++VQR LHEQ
Sbjct: 251 -----------PESQEGKFEKRACAKELSQLDT----RTGVQIKEALQLQLDVQRHLHEQ 295
Query: 166 LEVQRHLQLRIEAQGKYLQAVLEKAQE 192
LE+QR+LQLRIE QGK L+ ++E+ Q+
Sbjct: 296 LEIQRNLQLRIEEQGKQLKMMMEQQQK 322
Score = 37 (18.1 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 2 YHHHQNQGKSMHSSSRMPIPTE 23
YHH + S+ S M IP +
Sbjct: 81 YHHQSSDSPSLDQSVSM-IPMQ 101
>TAIR|locus:2148720 [details] [associations]
symbol:PHL1 "AT5G29000" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
HSSP:O49397 InterPro:IPR025756 InterPro:IPR017930
InterPro:IPR006447 Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294
EMBL:AC018632 EMBL:BT002344 EMBL:AY085154 IPI:IPI00527102
IPI:IPI00527253 IPI:IPI00891441 RefSeq:NP_001078629.1
RefSeq:NP_001119299.1 RefSeq:NP_568512.3 RefSeq:NP_851090.1
UniGene:At.26183 ProteinModelPortal:Q8GUN5 SMR:Q8GUN5 PRIDE:Q8GUN5
EnsemblPlants:AT5G29000.2 GeneID:833026 KEGG:ath:AT5G29000
TAIR:At5g29000 eggNOG:NOG275266 InParanoid:Q8GUN5 OMA:DSSSHNP
PhylomeDB:Q8GUN5 ProtClustDB:CLSN2680328 Genevestigator:Q8GUN5
Uniprot:Q8GUN5
Length = 413
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 76/161 (47%), Positives = 107/161 (66%)
Query: 32 SGPGDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHL 91
SG S V ++ K R++WTP+LHE F+EAVNQLGG+++ATPK V+KL+ PGLT+YH+
Sbjct: 219 SGRNSSSSVATS--KQRMRWTPELHEAFVEAVNQLGGSERATPKAVLKLLNNPGLTIYHV 276
Query: 92 KSHLQKYRLSKNLHGQANIGNNKIGPVTVPGERMPEANATHMNNLSIGPQPNKSLHISET 151
KSHLQKYR ++ K V GE E T + ++ S+ I++
Sbjct: 277 KSHLQKYRTARY----------KPETSEVTGEPQ-EKKMTSIEDIK-SLDMKTSVEITQA 324
Query: 152 IQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQE 192
+++Q+EVQ+RLHEQLE+QR LQL+IE QG+YLQ + EK Q+
Sbjct: 325 LRLQMEVQKRLHEQLEIQRSLQLQIEKQGRYLQMMFEKQQK 365
>TAIR|locus:2100880 [details] [associations]
symbol:AT3G04450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0016556 "mRNA modification" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR025756 InterPro:IPR017930
InterPro:IPR006447 Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294
IPI:IPI00540345 RefSeq:NP_187095.2 UniGene:At.40835
ProteinModelPortal:F4J3P7 SMR:F4J3P7 PRIDE:F4J3P7
EnsemblPlants:AT3G04450.1 GeneID:819601 KEGG:ath:AT3G04450
OMA:WPDWADQ Uniprot:F4J3P7
Length = 442
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 69/151 (45%), Positives = 107/151 (70%)
Query: 42 STDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS 101
S +K R++WTP+LHE F+EA+NQLGG+++ATPK V+KL+ PGLT+YH+KSHLQKYR +
Sbjct: 234 SMTSKQRMRWTPELHEAFVEAINQLGGSERATPKAVLKLINSPGLTVYHVKSHLQKYRTA 293
Query: 102 KNLHGQANIGNNKIGPVTVPGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRR 161
+ + + + P+ V + E + +L + S+ I+E +++Q++VQ++
Sbjct: 294 RY---KPELSKDTEEPL-VKNLKTIE----DIKSLDL----KTSIEITEALRLQMKVQKQ 341
Query: 162 LHEQLEVQRHLQLRIEAQGKYLQAVLEKAQE 192
LHEQLE+QR LQL+IE QG+YLQ ++EK Q+
Sbjct: 342 LHEQLEIQRSLQLQIEEQGRYLQMMIEKQQK 372
>TAIR|locus:2038957 [details] [associations]
symbol:AT2G20400 "AT2G20400" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT006119
EMBL:AK118313 IPI:IPI00521384 RefSeq:NP_179630.2 UniGene:At.43867
ProteinModelPortal:Q8GXC2 SMR:Q8GXC2 PaxDb:Q8GXC2 PRIDE:Q8GXC2
EnsemblPlants:AT2G20400.1 GeneID:816559 KEGG:ath:AT2G20400
TAIR:At2g20400 eggNOG:NOG265443 HOGENOM:HOG000064669
InParanoid:Q8GXC2 OMA:ANSMENR PhylomeDB:Q8GXC2
ProtClustDB:CLSN2918042 Genevestigator:Q8GXC2 Uniprot:Q8GXC2
Length = 397
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 71/156 (45%), Positives = 101/156 (64%)
Query: 45 AKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNL 104
AK R++WTP+LHE F++AVNQLGG+++ATPK V+K M + GLT++H+KSHLQKYR +K +
Sbjct: 230 AKGRMRWTPELHEVFVDAVNQLGGSNEATPKGVLKHMKVEGLTIFHVKSHLQKYRTAKYI 289
Query: 105 HGQANIGNNKIGPVTVPGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHE 164
PV P E PEA T + ++ + + I+ET+++Q+E Q++LHE
Sbjct: 290 ------------PV--PSEGSPEARLTPLEQIT-SDDTKRGIDITETLRIQMEHQKKLHE 334
Query: 165 QLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLG 200
QLE R +QLRIE QGK L ++EK G G
Sbjct: 335 QLESLRTMQLRIEEQGKALLMMIEKQNMGFGGPEQG 370
>TAIR|locus:2089260 [details] [associations]
symbol:AT3G13040 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002686 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR025756
InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AY050889 EMBL:AY096674
IPI:IPI00543771 RefSeq:NP_566442.1 RefSeq:NP_974298.1
UniGene:At.11993 ProteinModelPortal:Q949U2 SMR:Q949U2 STRING:Q949U2
PRIDE:Q949U2 EnsemblPlants:AT3G13040.1 EnsemblPlants:AT3G13040.2
GeneID:820490 KEGG:ath:AT3G13040 OMA:RIEEHAK
ProtClustDB:CLSN2688327 ArrayExpress:Q949U2 Genevestigator:Q949U2
Uniprot:Q949U2
Length = 449
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 70/155 (45%), Positives = 101/155 (65%)
Query: 42 STDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS 101
+ + K R++WTP+LHE F++AV +L G +KATPK V KLM + GLT+YH+KSHLQKYRL+
Sbjct: 237 AANQKSRMRWTPELHESFVKAVIKLEGPEKATPKAVKKLMNVEGLTIYHVKSHLQKYRLA 296
Query: 102 KNLHGQANIGNNKIGPVTVPGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRR 161
K + K T E A ++ + ++ ++E ++MQ+EVQ++
Sbjct: 297 KYMP------EKKEEKRTDNSEEKKLA----LSKSEADEKKKGAIQLTEALRMQMEVQKQ 346
Query: 162 LHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGR 196
LHEQLEVQR LQLRIE KYL+ +LE+ ++T GR
Sbjct: 347 LHEQLEVQRVLQLRIEEHAKYLEKMLEEQRKT-GR 380
>TAIR|locus:2041539 [details] [associations]
symbol:AT2G42660 "AT2G42660" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC006931 HSSP:O49397
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AC007087 EMBL:AY074640 EMBL:AY078938
IPI:IPI00542274 PIR:F84856 RefSeq:NP_181794.1 UniGene:At.37023
ProteinModelPortal:Q9SJJ0 SMR:Q9SJJ0 PaxDb:Q9SJJ0 PRIDE:Q9SJJ0
EnsemblPlants:AT2G42660.1 GeneID:818866 KEGG:ath:AT2G42660
TAIR:At2g42660 eggNOG:NOG258430 HOGENOM:HOG000153491 OMA:NREETVE
PhylomeDB:Q9SJJ0 ProtClustDB:CLSN2913320 ArrayExpress:Q9SJJ0
Genevestigator:Q9SJJ0 Uniprot:Q9SJJ0
Length = 255
Score = 194 (73.4 bits), Expect = 8.5e-15, P = 8.5e-15
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 47 PRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHG 106
PRL+WTPDLH F+ AV +LGG D+ATPK V+++M + GL++ H+KSHLQ YR SK L
Sbjct: 51 PRLRWTPDLHLSFVRAVQRLGGPDRATPKLVLEMMNLKGLSIAHVKSHLQMYR-SKKLEP 109
Query: 107 QANIG 111
+ G
Sbjct: 110 SSRPG 114
>TAIR|locus:2204518 [details] [associations]
symbol:AT1G14600 "AT1G14600" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AC010657 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AJ630486 EMBL:AY568658
IPI:IPI00523105 RefSeq:NP_172912.3 UniGene:At.41962
ProteinModelPortal:Q700D9 SMR:Q700D9 EnsemblPlants:AT1G14600.1
GeneID:838022 KEGG:ath:AT1G14600 TAIR:At1g14600 eggNOG:NOG329381
HOGENOM:HOG000239342 InParanoid:Q700D9 OMA:NIMNMER
Genevestigator:Q700D9 Uniprot:Q700D9
Length = 255
Score = 189 (71.6 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 34/56 (60%), Positives = 44/56 (78%)
Query: 47 PRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSK 102
PRL+WTP+LH F+ AV+ LGG KATPK V+K+M + GLT+ H+KSHLQ YR S+
Sbjct: 24 PRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQMYRGSR 79
>TAIR|locus:2051572 [details] [associations]
symbol:AT2G06020 "AT2G06020" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR006447
TIGRFAMs:TIGR01557 EMBL:AC006413 IPI:IPI00525998 PIR:C84474
RefSeq:NP_178659.1 UniGene:At.52657 ProteinModelPortal:Q9ZPZ8
SMR:Q9ZPZ8 EnsemblPlants:AT2G06020.1 GeneID:815156
KEGG:ath:AT2G06020 TAIR:At2g06020 eggNOG:NOG275517
HOGENOM:HOG000154034 OMA:SKITPCI PhylomeDB:Q9ZPZ8
ProtClustDB:CLSN2912993 ArrayExpress:Q9ZPZ8 Genevestigator:Q9ZPZ8
Uniprot:Q9ZPZ8
Length = 301
Score = 199 (75.1 bits), Expect = 7.3e-14, P = 7.3e-14
Identities = 36/69 (52%), Positives = 52/69 (75%)
Query: 42 STDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS 101
++D K RL+W+ DLH+ F+ AV +LGG +KATPK+V + M + G+ L+H+KSHLQK+RL
Sbjct: 82 TSDEKARLRWSSDLHDCFVNAVEKLGGPNKATPKSVKEAMEVEGIALHHVKSHLQKFRLG 141
Query: 102 K-NLHGQAN 109
K N+ G N
Sbjct: 142 KCNIRGGTN 150
>TAIR|locus:2042927 [details] [associations]
symbol:AT2G38300 "AT2G38300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT004973
EMBL:AK117689 IPI:IPI00540370 RefSeq:NP_181364.2 UniGene:At.46670
ProteinModelPortal:Q8GYE4 SMR:Q8GYE4 IntAct:Q8GYE4 STRING:Q8GYE4
PRIDE:Q8GYE4 EnsemblPlants:AT2G38300.1 GeneID:818410
KEGG:ath:AT2G38300 TAIR:At2g38300 eggNOG:NOG310127
HOGENOM:HOG000090767 InParanoid:Q8GYE4 OMA:KDEEDRT PhylomeDB:Q8GYE4
ProtClustDB:CLSN2918908 Genevestigator:Q8GYE4 Uniprot:Q8GYE4
Length = 340
Score = 199 (75.1 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 38/70 (54%), Positives = 51/70 (72%)
Query: 47 PRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSK-NLH 105
PRL+WTPDLH RF+ AV +LGG ++ATPK V ++M I GL++ H+KSHLQ YR K +
Sbjct: 55 PRLRWTPDLHLRFVRAVERLGGQERATPKLVRQMMNIKGLSIAHVKSHLQMYRSKKIDDQ 114
Query: 106 GQANIGNNKI 115
GQA G+ +
Sbjct: 115 GQAIAGHKHL 124
>TAIR|locus:2058445 [details] [associations]
symbol:MYBC1 "AT2G40970" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009409 "response to cold" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0009409 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC004261
HSSP:O49397 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC002409 EMBL:AY072381
EMBL:BT000098 IPI:IPI00539516 PIR:T00761 RefSeq:NP_181630.1
UniGene:At.27776 ProteinModelPortal:O22210 SMR:O22210
EnsemblPlants:AT2G40970.1 GeneID:818697 KEGG:ath:AT2G40970
TAIR:At2g40970 eggNOG:NOG255246 HOGENOM:HOG000238691
InParanoid:O22210 OMA:RYEDSEY PhylomeDB:O22210
ProtClustDB:CLSN2913178 ArrayExpress:O22210 Genevestigator:O22210
Uniprot:O22210
Length = 248
Score = 182 (69.1 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 49/123 (39%), Positives = 65/123 (52%)
Query: 4 HHQNQGKSMHSSSRMPIPTERHLFLQGGSGPGDS---------GLVLSTDAKPRLKWTPD 54
+HQ S ++ P PT + + G GDS G T +PRL WTP
Sbjct: 56 YHQKLQSS--TTPTTPTPTPPPMMMNSDFGGGDSTDLGSGSIGGEPARTLKRPRLVWTPQ 113
Query: 55 LHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS-KNLHGQANIGNN 113
LH+RF++AV LG A PKT+M+LM + GLT ++ SHLQKYRL + + G N GN
Sbjct: 114 LHKRFVDAVGHLG-IKNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLRRMQG-GN-GNG 170
Query: 114 KIG 116
G
Sbjct: 171 ITG 173
>TAIR|locus:2041145 [details] [associations]
symbol:AT2G02060 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 HOGENOM:HOG000239342 EMBL:BT008556 EMBL:BT008699
EMBL:AK229511 IPI:IPI00542007 RefSeq:NP_565281.2 UniGene:At.41520
ProteinModelPortal:Q7X887 SMR:Q7X887 EnsemblPlants:AT2G02060.1
GeneID:814737 KEGG:ath:AT2G02060 TAIR:At2g02060 eggNOG:NOG268656
InParanoid:Q7X887 OMA:WREQEHE ProtClustDB:CLSN2681500
Genevestigator:Q7X887 Uniprot:Q7X887
Length = 256
Score = 186 (70.5 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 33/53 (62%), Positives = 41/53 (77%)
Query: 47 PRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYR 99
PRL+WTPDLH F+ AV LGG +ATPK V+K+M + GLT+ H+KSHLQ YR
Sbjct: 30 PRLRWTPDLHRCFVHAVEILGGQHRATPKLVLKMMDVKGLTISHVKSHLQMYR 82
>TAIR|locus:2103247 [details] [associations]
symbol:AT3G10760 "AT3G10760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
EMBL:AC011708 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 HOGENOM:HOG000238691 ProtClustDB:CLSN2716677
IPI:IPI00530545 RefSeq:NP_187687.1 UniGene:At.39869
ProteinModelPortal:Q9SG82 SMR:Q9SG82 PRIDE:Q9SG82
EnsemblPlants:AT3G10760.1 GeneID:820245 KEGG:ath:AT3G10760
TAIR:At3g10760 eggNOG:NOG312708 InParanoid:Q9SG82 OMA:FARWEEE
PhylomeDB:Q9SG82 Genevestigator:Q9SG82 Uniprot:Q9SG82
Length = 335
Score = 190 (71.9 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 57/183 (31%), Positives = 84/183 (45%)
Query: 3 HHHQNQGKSMHSSSRMPIPTERHL----FLQGGSGPGDSGLVLSTDAK----PRLKWTPD 54
HHH + + + S++ +P+ + F + G G A+ PRL WTP
Sbjct: 54 HHHHHHQTTPPTPSQLQLPSSQANSSAEFAADSADLGSGGAAGDEPARTLKRPRLVWTPQ 113
Query: 55 LHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS-KNLHGQANIGNN 113
LH+RF++AV LG A PKT+M+LM + GLT ++ SHLQKYRL K + G ++ G
Sbjct: 114 LHKRFVDAVAHLG-IKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGA 172
Query: 114 KIGPVT---VPGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQLEVQR 170
P T +P A+ H N + S T+Q Q ++
Sbjct: 173 GSDPATDRLFASSPVP-AHFLHPNRVPSSDHFMPSFVPIATLQQQQQMAAAAAAAAAANP 231
Query: 171 HLQ 173
HLQ
Sbjct: 232 HLQ 234
>TAIR|locus:2148348 [details] [associations]
symbol:BOA "AT5G59570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0009909 "regulation of flower development" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
EMBL:CP002688 GO:GO:0003677 GO:GO:0007623 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB025604
GO:GO:0009909 HSSP:O49397 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT026065 EMBL:AK117348
EMBL:AB206577 IPI:IPI00538187 RefSeq:NP_200765.1 UniGene:At.29219
ProteinModelPortal:Q9LTH4 SMR:Q9LTH4 STRING:Q9LTH4
EnsemblPlants:AT5G59570.1 GeneID:836076 KEGG:ath:AT5G59570
TAIR:At5g59570 InParanoid:Q9LTH4 OMA:ERSRTIH PhylomeDB:Q9LTH4
ProtClustDB:CLSN2685121 Genevestigator:Q9LTH4 Uniprot:Q9LTH4
Length = 298
Score = 186 (70.5 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 41/80 (51%), Positives = 52/80 (65%)
Query: 29 QGGSGPGD-SGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLT 87
+G SGP D SG T +PRL WTP LH+RF++ V LG A PKT+M+LM + GLT
Sbjct: 126 EGDSGPEDASG---KTSKRPRLVWTPQLHKRFVDVVAHLG-IKNAVPKTIMQLMNVEGLT 181
Query: 88 LYHLKSHLQKYRLS-KNLHG 106
++ SHLQKYRL K + G
Sbjct: 182 RENVASHLQKYRLYLKRIQG 201
>TAIR|locus:2063141 [details] [associations]
symbol:AT2G40260 "AT2G40260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC007020
HOGENOM:HOG000090767 IPI:IPI00530168 PIR:C84827 RefSeq:NP_181555.1
UniGene:At.53083 ProteinModelPortal:Q9SIZ5 SMR:Q9SIZ5 PRIDE:Q9SIZ5
EnsemblPlants:AT2G40260.1 GeneID:818618 KEGG:ath:AT2G40260
TAIR:At2g40260 eggNOG:NOG267620 InParanoid:Q9SIZ5 OMA:FRINSHE
PhylomeDB:Q9SIZ5 ProtClustDB:CLSN2913060 ArrayExpress:Q9SIZ5
Genevestigator:Q9SIZ5 Uniprot:Q9SIZ5
Length = 410
Score = 189 (71.6 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 33/56 (58%), Positives = 45/56 (80%)
Query: 47 PRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSK 102
PRL+WTP+LH F++AV +LGG D+ATPK V++LM + GL++ H+KSHLQ YR K
Sbjct: 83 PRLRWTPELHICFLQAVERLGGPDRATPKLVLQLMNVKGLSIAHVKSHLQMYRSKK 138
>TAIR|locus:2125771 [details] [associations]
symbol:AT4G04580 "AT4G04580" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
EMBL:AL161501 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AF074021 IPI:IPI00541303 PIR:G85057
RefSeq:NP_192367.1 UniGene:At.54143 ProteinModelPortal:Q9XEB2
SMR:Q9XEB2 EnsemblPlants:AT4G04580.1 GeneID:825790
KEGG:ath:AT4G04580 TAIR:At4g04580 eggNOG:NOG300503
HOGENOM:HOG000153846 InParanoid:Q9XEB2 OMA:RDLTISH PhylomeDB:Q9XEB2
ProtClustDB:CLSN2915807 ArrayExpress:Q9XEB2 Genevestigator:Q9XEB2
Uniprot:Q9XEB2
Length = 166
Score = 169 (64.5 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 30/56 (53%), Positives = 40/56 (71%)
Query: 47 PRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSK 102
PR+ WT DL RFI+ + +LGG + ATPK ++ LMG+ LT+ H+KSHLQ YR K
Sbjct: 15 PRMHWTDDLDIRFIQVIEKLGGEESATPKRILSLMGVRDLTISHVKSHLQMYRNKK 70
>TAIR|locus:2171427 [details] [associations]
symbol:KAN "KANADI" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0009956 "radial pattern formation" evidence=IMP] [GO:0010051
"xylem and phloem pattern formation" evidence=IMP] [GO:0010158
"abaxial cell fate specification" evidence=IMP] [GO:0048440 "carpel
development" evidence=IGI] [GO:0048481 "ovule development"
evidence=IGI] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=IGI] [GO:0009943 "adaxial/abaxial
axis specification" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
EMBL:AB005242 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 PROSITE:PS51293
GO:GO:0010051 GO:GO:0048481 HSSP:O49397 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0010158 GO:GO:0009944
GO:GO:0009956 EMBL:AY030192 EMBL:AY037864 EMBL:AY048688
EMBL:BT026436 IPI:IPI00535955 RefSeq:NP_568334.1 UniGene:At.6466
UniGene:At.66763 ProteinModelPortal:Q93WJ9 SMR:Q93WJ9 IntAct:Q93WJ9
STRING:Q93WJ9 PRIDE:Q93WJ9 EnsemblPlants:AT5G16560.1 GeneID:831518
KEGG:ath:AT5G16560 TAIR:At5g16560 eggNOG:NOG330873
HOGENOM:HOG000241649 InParanoid:Q93WJ9 OMA:GINGNEV PhylomeDB:Q93WJ9
ProtClustDB:CLSN2917650 Genevestigator:Q93WJ9 Uniprot:Q93WJ9
Length = 403
Score = 184 (69.8 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 44/108 (40%), Positives = 57/108 (52%)
Query: 2 YHHHQNQ-GKSMHSSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFI 60
+HHH NQ G S S P H S + PR++WT LH RF+
Sbjct: 174 HHHHHNQYGVVGSSDSSSPHHHNHHHHGMIRSRFLPKMPTKRSMRAPRMRWTSSLHARFV 233
Query: 61 EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQA 108
AV LGG ++ATPK+V++LM + LTL H+KSHLQ YR K + A
Sbjct: 234 HAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTNKPA 281
Score = 39 (18.8 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 12/50 (24%), Positives = 20/50 (40%)
Query: 119 TVPGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQLEV 168
TV P A++ +G N+ H S T Q LH++ ++
Sbjct: 273 TVKTTNKPAASSDGSGEEEMGINGNEVHHQSSTDQRAQSDDTSLHQETDI 322
>TAIR|locus:2163852 [details] [associations]
symbol:ATS "AT5G42630" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0048481 "ovule development" evidence=IMP] [GO:0080060
"integument development" evidence=IGI;IMP] [GO:0005618 "cell wall"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0005618 GO:GO:0030154 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0044212
PROSITE:PS51293 HSSP:O49397 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 GO:GO:0080060 HOGENOM:HOG000241649 EMBL:AB013391
EMBL:AY048691 EMBL:BT026053 IPI:IPI00541325 IPI:IPI00892123
RefSeq:NP_001119363.1 RefSeq:NP_199077.1 UniGene:At.26412
ProteinModelPortal:Q9FJV5 SMR:Q9FJV5 STRING:Q9FJV5
EnsemblPlants:AT5G42630.1 GeneID:834270 KEGG:ath:AT5G42630
TAIR:At5g42630 eggNOG:NOG280455 InParanoid:Q9FJV5 OMA:PQIYGRD
PhylomeDB:Q9FJV5 ProtClustDB:CLSN2916355 Genevestigator:Q9FJV5
Uniprot:Q9FJV5
Length = 276
Score = 176 (67.0 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 54/170 (31%), Positives = 79/170 (46%)
Query: 38 GLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQK 97
GL S A PR++WT LH F+ AV LGG ++ATPK+V++LM + LTL H+KSHLQ
Sbjct: 98 GLKRSIRA-PRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQM 156
Query: 98 YRLSKNLHGQANIGNNKIGPVTVP-------GERMPEANATHMNNLSIGPQPNKSLHISE 150
YR K + + G K+ E E T+ N S Q + S
Sbjct: 157 YRTVK-CTDKGSPGEGKVEKEAEQRIEDNNNNEEADEGTDTNSPNSS-SVQKTQRASWSS 214
Query: 151 TIQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLG 200
T ++ + + + L H + E + + L+ TLGR + G
Sbjct: 215 TKEVSRSISTQAYSHLGTTHHTKDNEEKEDTNIHLNLDF---TLGRPSWG 261
>TAIR|locus:2093668 [details] [associations]
symbol:RR1 "response regulator 1" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=IGI;RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010380 "regulation of chlorophyll biosynthetic process"
evidence=IGI] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=IGI;RCA] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0080022 "primary root development" evidence=IGI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0010029
"regulation of seed germination" evidence=RCA] [GO:0010043
"response to zinc ion" evidence=RCA] [GO:0016558 "protein import
into peroxisome matrix" evidence=RCA] [GO:0048831 "regulation of
shoot system development" evidence=RCA] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009736 GO:GO:0080022 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0048367 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491 eggNOG:COG0745
GO:GO:0031537 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AB016471
EMBL:AP001308 EMBL:AB028608 EMBL:AY056099 EMBL:AK316883
IPI:IPI00534841 IPI:IPI00547650 PIR:T51246 RefSeq:NP_566561.2
RefSeq:NP_850600.2 UniGene:At.183 UniGene:At.48672
ProteinModelPortal:Q940D0 SMR:Q940D0 IntAct:Q940D0 STRING:Q940D0
PaxDb:Q940D0 PRIDE:Q940D0 EnsemblPlants:AT3G16857.2 GeneID:820940
KEGG:ath:AT3G16857 GeneFarm:3920 TAIR:At3g16857
HOGENOM:HOG000034078 InParanoid:Q940D0 OMA:RTCLYEV PhylomeDB:Q940D0
ProtClustDB:CLSN2680844 Genevestigator:Q940D0 GermOnline:AT3G16857
Uniprot:Q940D0
Length = 690
Score = 183 (69.5 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 52/146 (35%), Positives = 78/146 (53%)
Query: 7 NQGKSMHSSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFIEAVNQL 66
N+G + SSSR E QG D+ S KPR+ W+ +LH++F+ AVNQL
Sbjct: 204 NEGNNWRSSSRKRKDEEGEE--QGDDKDEDA----SNLKKPRVVWSVELHQQFVAAVNQL 257
Query: 67 GGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS-KNLHG----QANIGNNKIGPVTVP 121
G +KA PK +++LM +PGLT ++ SHLQKYR+ + L G Q N+ N+ +
Sbjct: 258 G-VEKAVPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNSFMTGQDAS 316
Query: 122 GERMPEANATHMNNLSI-GPQPNKSL 146
+ N + L++ G P +SL
Sbjct: 317 FGPLSTLNGFDLQALAVTGQLPAQSL 342
>TAIR|locus:2028346 [details] [associations]
symbol:KAN2 "AT1G32240" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048440 "carpel development" evidence=IGI] [GO:0048481 "ovule
development" evidence=IGI] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=IGI] [GO:0009737 "response to
abscisic acid stimulus" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0030154 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 PROSITE:PS51293
GO:GO:0048481 EMBL:AC084110 HSSP:O49397 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0009944
HOGENOM:HOG000241649 EMBL:AY048689 EMBL:BT029211 EMBL:AB493491
IPI:IPI00539948 RefSeq:NP_564392.1 UniGene:At.25340
ProteinModelPortal:Q9C616 SMR:Q9C616 STRING:Q9C616
EnsemblPlants:AT1G32240.1 GeneID:840116 KEGG:ath:AT1G32240
TAIR:At1g32240 eggNOG:NOG325874 InParanoid:Q9C616 OMA:SDVYENG
PhylomeDB:Q9C616 ProtClustDB:CLSN2715231 Genevestigator:Q9C616
Uniprot:Q9C616
Length = 388
Score = 178 (67.7 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 44/122 (36%), Positives = 63/122 (51%)
Query: 47 PRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLH- 105
PR++WT LH RF+ AV LGG ++ATPK+V++LM + LTL H+KSHLQ YR K
Sbjct: 214 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDK 273
Query: 106 GQANIGNNKIGPVTVPGERMPEANATHMNNLSIGPQP-NKSLHISETIQMQIEVQRRLHE 164
A+ G + + G+ + MN S + L S + + RLH
Sbjct: 274 AAASSGQSDVYENGSSGDNNSDDWMFDMNRKSRDSEELTNPLEKSNGLWTNSSGEARLHG 333
Query: 165 QL 166
+L
Sbjct: 334 KL 335
>TAIR|locus:2175364 [details] [associations]
symbol:AT5G05090 "AT5G05090" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002688
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AB005245 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AY093188
EMBL:BT006289 IPI:IPI00523871 RefSeq:NP_196128.1 UniGene:At.33034
ProteinModelPortal:Q9FF65 SMR:Q9FF65 PRIDE:Q9FF65
EnsemblPlants:AT5G05090.1 GeneID:830391 KEGG:ath:AT5G05090
TAIR:At5g05090 InParanoid:Q9FF65 OMA:MREEDSN PhylomeDB:Q9FF65
ProtClustDB:CLSN2716677 ArrayExpress:Q9FF65 Genevestigator:Q9FF65
Uniprot:Q9FF65
Length = 266
Score = 171 (65.3 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 39/97 (40%), Positives = 53/97 (54%)
Query: 5 HQNQGKSMHSSSRMPIPTERHLFLQ-GGSGPGDSGLVLSTDAKPRLKWTPDLHERFIEAV 63
H+N + P + + + G GD T +PRL WTP LH+RF++AV
Sbjct: 41 HRNNNSNSGQPLPQTTPPQPNSSAEIAGDSTGDEPA--RTLKRPRLVWTPQLHKRFVDAV 98
Query: 64 NQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 100
LG A PKT+M+LM + GLT ++ SHLQKYRL
Sbjct: 99 AHLG-IKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 134
>UNIPROTKB|Q0J235 [details] [associations]
symbol:RL9 "Probable transcription factor RL9"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IDA] [GO:0010158 "abaxial cell fate specification"
evidence=IMP] [GO:0010229 "inflorescence development" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AP008215 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0010158 GO:GO:0010229
eggNOG:NOG330873 HOGENOM:HOG000241649 EMBL:AP005904 EMBL:FJ268747
EMBL:FJ268748 RefSeq:NP_001063097.1 UniGene:Os.5597 PRIDE:Q0J235
GeneID:4346973 KEGG:osa:4346973 Gramene:Q0J235 OMA:DALPWRH
ProtClustDB:CLSN2697690 Uniprot:Q0J235
Length = 532
Score = 177 (67.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 47 PRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKN 103
PR++WT LH RF+ AV LGG ++ATPK+V++LM + LTL H+KSHLQ YR K+
Sbjct: 325 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKS 381
>TAIR|locus:505006489 [details] [associations]
symbol:KAN3 "AT4G17695" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0007275
GO:GO:0005634 GO:GO:0030154 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 PROSITE:PS51293
HSSP:O49397 InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
EMBL:Z97344 HOGENOM:HOG000241649 EMBL:AY048690 IPI:IPI00544036
RefSeq:NP_567535.1 UniGene:At.26411 ProteinModelPortal:Q941I2
SMR:Q941I2 PaxDb:Q941I2 PRIDE:Q941I2 EnsemblPlants:AT4G17695.1
GeneID:827490 KEGG:ath:AT4G17695 TAIR:At4g17695 eggNOG:NOG253351
InParanoid:Q941I2 OMA:SSNENEW PhylomeDB:Q941I2
ProtClustDB:CLSN2917571 Genevestigator:Q941I2 Uniprot:Q941I2
Length = 322
Score = 172 (65.6 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 31/57 (54%), Positives = 42/57 (73%)
Query: 47 PRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKN 103
PR++WT LH F+ AV LGG ++ATPK+V++LM + LTL H+KSHLQ YR K+
Sbjct: 165 PRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQMYRTIKS 221
>TAIR|locus:2130095 [details] [associations]
symbol:RR2 "response regulator 2" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=RCA;TAS] [GO:0009723 "response
to ethylene stimulus" evidence=IMP] [GO:0009735 "response to
cytokinin stimulus" evidence=IEP;IGI] [GO:0010150 "leaf senescence"
evidence=IMP] [GO:0009873 "ethylene mediated signaling pathway"
evidence=IMP] [GO:0010119 "regulation of stomatal movement"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0010029 "regulation of seed germination" evidence=RCA]
[GO:0031537 "regulation of anthocyanin metabolic process"
evidence=RCA] [GO:0048831 "regulation of shoot system development"
evidence=RCA] InterPro:IPR001005 InterPro:IPR001789
InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009873 GO:GO:0010119 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0010150 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:Z97340 EMBL:AL161543 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491
eggNOG:COG2204 InterPro:IPR017053 PIRSF:PIRSF036392
ProtClustDB:CLSN2680844 EMBL:AB016472 EMBL:AJ005196 EMBL:DQ473518
EMBL:DQ473519 EMBL:DQ473520 EMBL:DQ473521 EMBL:AK175378
EMBL:AK175737 EMBL:AK175959 EMBL:AK176614 IPI:IPI00518324
PIR:D71427 PIR:T51247 RefSeq:NP_193346.4 UniGene:At.21955
ProteinModelPortal:Q9ZWJ9 SMR:Q9ZWJ9 IntAct:Q9ZWJ9 STRING:Q9ZWJ9
PaxDb:Q9ZWJ9 PRIDE:Q9ZWJ9 EnsemblPlants:AT4G16110.1 GeneID:827297
KEGG:ath:AT4G16110 GeneFarm:3921 TAIR:At4g16110 InParanoid:Q9ZWJ9
OMA:ILERMLM PhylomeDB:Q9ZWJ9 Genevestigator:Q9ZWJ9
GermOnline:AT4G16110 Uniprot:Q9ZWJ9
Length = 664
Score = 175 (66.7 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 44/118 (37%), Positives = 70/118 (59%)
Query: 35 GDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSH 94
GD S+ KPR+ W+ +LH++F+ AVNQLG DKA PK ++++M +PGLT ++ SH
Sbjct: 205 GDDKEDSSSLKKPRVVWSVELHQQFVAAVNQLG-VDKAVPKKILEMMNVPGLTRENVASH 263
Query: 95 LQKYRLS-KNLHGQA-NIGNNKIGPVTVPGER---MPEANATHMNNLSI-GPQPNKSL 146
LQKYR+ + L G + + GN +T + + N + +L++ G P +SL
Sbjct: 264 LQKYRIYLRRLGGVSQHQGNMNHSFMTGQDQSFGPLSSLNGFDLQSLAVTGQLPPQSL 321
>TAIR|locus:2063746 [details] [associations]
symbol:AT2G03500 "AT2G03500" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC006284
HOGENOM:HOG000237574 EMBL:AY060559 EMBL:AY133630 EMBL:AK221662
IPI:IPI00544167 PIR:B84449 RefSeq:NP_027544.1 UniGene:At.27373
ProteinModelPortal:Q9ZQ85 SMR:Q9ZQ85 IntAct:Q9ZQ85
EnsemblPlants:AT2G03500.1 GeneID:814878 KEGG:ath:AT2G03500
TAIR:At2g03500 eggNOG:NOG301728 InParanoid:Q9ZQ85 OMA:QSYSMLL
PhylomeDB:Q9ZQ85 ProtClustDB:CLSN2687945 ArrayExpress:Q9ZQ85
Genevestigator:Q9ZQ85 Uniprot:Q9ZQ85
Length = 432
Score = 171 (65.3 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 33/66 (50%), Positives = 44/66 (66%)
Query: 35 GDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSH 94
G S ++ K R W+PDLH RF++A+ LGG+ ATPK + +LM + GLT +KSH
Sbjct: 222 GVSSTTSQSNRKARRCWSPDLHRRFVQALQMLGGSQVATPKQIRELMKVDGLTNDEVKSH 281
Query: 95 LQKYRL 100
LQKYRL
Sbjct: 282 LQKYRL 287
>TAIR|locus:2065398 [details] [associations]
symbol:RR14 "response regulator 14" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009736
"cytokinin mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0010029 "regulation of seed
germination" evidence=RCA] [GO:0031537 "regulation of anthocyanin
metabolic process" evidence=RCA] [GO:0048831 "regulation of shoot
system development" evidence=RCA] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491
eggNOG:COG0745 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AC006069
EMBL:AY099726 EMBL:AY128887 EMBL:AY088149 IPI:IPI00545640
PIR:G84428 RefSeq:NP_178285.1 UniGene:At.42470
ProteinModelPortal:Q8L9Y3 SMR:Q8L9Y3 IntAct:Q8L9Y3 STRING:Q8L9Y3
EnsemblPlants:AT2G01760.1 GeneID:814707 KEGG:ath:AT2G01760
GeneFarm:3930 TAIR:At2g01760 HOGENOM:HOG000034077 InParanoid:Q8L9Y3
OMA:SWILERS PhylomeDB:Q8L9Y3 ProtClustDB:CLSN2913129
Genevestigator:Q8L9Y3 GermOnline:AT2G01760 Uniprot:Q8L9Y3
Length = 382
Score = 169 (64.5 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 33/69 (47%), Positives = 51/69 (73%)
Query: 46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS-KNL 104
K R+ W+ +LH++F+ AVN+LG DKA PK +++LM +PGL+ ++ SHLQK+RL K L
Sbjct: 200 KSRVVWSIELHQQFVNAVNKLG-IDKAVPKRILELMNVPGLSRENVASHLQKFRLYLKRL 258
Query: 105 HGQANIGNN 113
G+A+ N+
Sbjct: 259 SGEASQSND 267
>TAIR|locus:2085984 [details] [associations]
symbol:AT3G25790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
EMBL:AB028607 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
HOGENOM:HOG000237574 ProtClustDB:CLSN2687791 IPI:IPI00546166
RefSeq:NP_566778.1 UniGene:At.37325 ProteinModelPortal:Q9LS00
SMR:Q9LS00 EnsemblPlants:AT3G25790.1 GeneID:822170
KEGG:ath:AT3G25790 TAIR:At3g25790 InParanoid:Q9LS00 OMA:AYKREIS
PhylomeDB:Q9LS00 Genevestigator:Q9LS00 Uniprot:Q9LS00
Length = 357
Score = 163 (62.4 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 43/108 (39%), Positives = 54/108 (50%)
Query: 30 GGSGPGDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLY 89
GGSG G G K R W+ +LH RF+ A+ QLGG ATPK + +M + GLT
Sbjct: 183 GGSG-GGGGR--RGQRKNRRCWSQELHRRFLNALKQLGGPHVATPKQIRDIMKVDGLTND 239
Query: 90 HLKSHLQKYRLSKNLHGQANIGNNKIGP---VTVPGERMPEANATHMN 134
+KSHLQKYRL Q N V V G +P+ N + N
Sbjct: 240 EVKSHLQKYRLHARRPSQTTPNNRNSQTQHFVVVGGIWVPQTNHSTAN 287
>TAIR|locus:2031210 [details] [associations]
symbol:AT1G25550 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010167 "response to nitrate" evidence=RCA] [GO:0015706
"nitrate transport" evidence=RCA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684 GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
HSSP:O49397 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237574
ProtClustDB:CLSN2687960 EMBL:AF326890 EMBL:AF339707 EMBL:AF372906
EMBL:BT002674 IPI:IPI00533337 RefSeq:NP_564236.1 UniGene:At.25159
ProteinModelPortal:Q9FPE8 SMR:Q9FPE8 IntAct:Q9FPE8 STRING:Q9FPE8
PRIDE:Q9FPE8 EnsemblPlants:AT1G25550.1 GeneID:839142
KEGG:ath:AT1G25550 TAIR:At1g25550 InParanoid:Q9FPE8 OMA:ECSERTT
PhylomeDB:Q9FPE8 ArrayExpress:Q9FPE8 Genevestigator:Q9FPE8
Uniprot:Q9FPE8
Length = 344
Score = 162 (62.1 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 31/58 (53%), Positives = 41/58 (70%)
Query: 43 TDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 100
++ K R W+P+LH RF+ A+ QLGG+ ATPK + LM + GLT +KSHLQKYRL
Sbjct: 206 SNRKQRRCWSPELHRRFLHALQQLGGSHVATPKQIRDLMKVDGLTNDEVKSHLQKYRL 263
>TAIR|locus:2167639 [details] [associations]
symbol:GLK2 "AT5G44190" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=RCA;IMP;IDA] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0009910 "negative regulation of flower
development" evidence=IGI] [GO:0010380 "regulation of chlorophyll
biosynthetic process" evidence=IGI] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006417 "regulation of translation" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0009657
"plastid organization" evidence=RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010027 "thylakoid membrane organization"
evidence=RCA] [GO:0010207 "photosystem II assembly" evidence=RCA]
[GO:0030154 "cell differentiation" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042793
"transcription from plastid promoter" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 EMBL:AB005239
GO:GO:0009658 GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689
PROSITE:PS51293 GO:GO:0009910 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
HOGENOM:HOG000237698 EMBL:AB062490 EMBL:AY026773 EMBL:AY028368
EMBL:AY050386 EMBL:AY124819 IPI:IPI00535889 RefSeq:NP_199232.1
UniGene:At.19638 ProteinModelPortal:Q9FFH0 SMR:Q9FFH0 STRING:Q9FFH0
EnsemblPlants:AT5G44190.1 GeneID:834442 KEGG:ath:AT5G44190
TAIR:At5g44190 eggNOG:NOG271712 InParanoid:Q9FFH0 OMA:QEMEGNT
PhylomeDB:Q9FFH0 ProtClustDB:CLSN2916711 Genevestigator:Q9FFH0
Uniprot:Q9FFH0
Length = 386
Score = 163 (62.4 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 35/82 (42%), Positives = 52/82 (63%)
Query: 46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS-KNL 104
KP++ WTP+LH +F++AV QLG DKA P ++++M + LT +++ SHLQKYR K+L
Sbjct: 147 KPKVDWTPELHRKFVQAVEQLG-VDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKHL 205
Query: 105 ---HGQANIGN-NKIGPVTVPG 122
+A N + V VPG
Sbjct: 206 LAREAEAASWNLRRHATVAVPG 227
>UNIPROTKB|Q5Z5I4 [details] [associations]
symbol:GLK1 "Probable transcription factor GLK1"
species:39947 "Oryza sativa Japonica Group" [GO:0010638 "positive
regulation of organelle organization" evidence=IGI] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IGI]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
GO:GO:0045893 GO:GO:0003677 EMBL:AP008212 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 PROSITE:PS51293
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AP005688 EMBL:AK061946 EMBL:AK065184
EMBL:AK098909 EMBL:AK122161 RefSeq:NP_001057583.2 UniGene:Os.3340
ProteinModelPortal:Q5Z5I4 STRING:Q5Z5I4
EnsemblPlants:LOC_Os06g24070.1 GeneID:4340977 KEGG:osa:4340977
Gramene:Q5Z5I4 eggNOG:NOG283574 HOGENOM:HOG000237698 OMA:IDSLTRH
ProtClustDB:CLSN2696175 GO:GO:0010638 Uniprot:Q5Z5I4
Length = 455
Score = 164 (62.8 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 29/54 (53%), Positives = 41/54 (75%)
Query: 46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYR 99
K ++ WTP+LH RF++AV QLG DKA P ++++MGI LT +++ SHLQKYR
Sbjct: 180 KAKVDWTPELHRRFVQAVEQLG-IDKAVPSRILEIMGIDSLTRHNIASHLQKYR 232
>TAIR|locus:2026863 [details] [associations]
symbol:AT1G68670 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009737 "response to abscisic acid stimulus" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684
GO:GO:0009737 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AY063886
EMBL:AY091241 IPI:IPI00541260 RefSeq:NP_564938.1 UniGene:At.27154
ProteinModelPortal:Q8VZS3 SMR:Q8VZS3 IntAct:Q8VZS3
EnsemblPlants:AT1G68670.1 GeneID:843197 KEGG:ath:AT1G68670
TAIR:At1g68670 HOGENOM:HOG000237574 InParanoid:Q8VZS3 OMA:EHESSPE
PhylomeDB:Q8VZS3 ProtClustDB:CLSN2687960 ArrayExpress:Q8VZS3
Genevestigator:Q8VZS3 Uniprot:Q8VZS3
Length = 354
Score = 157 (60.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 31/58 (53%), Positives = 39/58 (67%)
Query: 43 TDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 100
T K R W+P+LH RF+ A+ QLGG+ ATPK + M + GLT +KSHLQKYRL
Sbjct: 212 THRKQRRCWSPELHRRFLNALQQLGGSHVATPKQIRDHMKVDGLTNDEVKSHLQKYRL 269
>TAIR|locus:2010297 [details] [associations]
symbol:AT1G49560 "AT1G49560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC011807 EMBL:AK221631
IPI:IPI00546952 PIR:B96532 RefSeq:NP_564549.1 UniGene:At.38204
ProteinModelPortal:Q9FX84 SMR:Q9FX84 EnsemblPlants:AT1G49560.1
GeneID:841380 KEGG:ath:AT1G49560 TAIR:At1g49560 InParanoid:Q9FX84
OMA:SSMEDVE PhylomeDB:Q9FX84 ProtClustDB:CLSN2917204
Genevestigator:Q9FX84 Uniprot:Q9FX84
Length = 333
Score = 150 (57.9 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 30/55 (54%), Positives = 37/55 (67%)
Query: 46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 100
K R W P+LH RF++A+ QLGG ATPK + + M GLT +KSHLQKYRL
Sbjct: 192 KQRRCWNPELHRRFVDALQQLGGPGVATPKQIREHMQEEGLTNDEVKSHLQKYRL 246
>TAIR|locus:2115070 [details] [associations]
symbol:AT4G37180 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002687
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00537470
RefSeq:NP_849513.1 UniGene:At.4657 ProteinModelPortal:F4JRB0
SMR:F4JRB0 PRIDE:F4JRB0 EnsemblPlants:AT4G37180.2 GeneID:829872
KEGG:ath:AT4G37180 OMA:SCRNDET Uniprot:F4JRB0
Length = 363
Score = 150 (57.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 27/58 (46%), Positives = 40/58 (68%)
Query: 48 RLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLH 105
R +W+ +LH +F++A+++LGG ATPK + LM + GLT +KSHLQKYR+ H
Sbjct: 219 RRRWSQELHRKFVDALHRLGGPQVATPKQIRDLMKVDGLTNDEVKSHLQKYRMHIRKH 276
>TAIR|locus:2205339 [details] [associations]
symbol:HRS1 "HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY
ROOT SHORTENING 1" species:3702 "Arabidopsis thaliana" [GO:0005634
"nucleus" evidence=ISM] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0016036 "cellular response to
phosphate starvation" evidence=IMP] [GO:0080022 "primary root
development" evidence=IMP] [GO:0000041 "transition metal ion
transport" evidence=RCA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC011810
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0080022 GO:GO:0016036 HSSP:O49397
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 HOGENOM:HOG000237574 EMBL:AF367336 EMBL:AY124865
IPI:IPI00529437 PIR:F86267 RefSeq:NP_563926.1 UniGene:At.20366
ProteinModelPortal:Q9FX67 SMR:Q9FX67 STRING:Q9FX67
EnsemblPlants:AT1G13300.1 GeneID:837890 KEGG:ath:AT1G13300
TAIR:At1g13300 eggNOG:NOG274505 InParanoid:Q9FX67 OMA:TRDESMR
PhylomeDB:Q9FX67 ProtClustDB:CLSN2687791 Genevestigator:Q9FX67
Uniprot:Q9FX67
Length = 344
Score = 149 (57.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 36/87 (41%), Positives = 49/87 (56%)
Query: 46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLH 105
K R W+ LH RF+ A+ LGG ATPK + + M + GLT +KSHLQKYRL
Sbjct: 181 KQRRCWSSQLHRRFLNALQHLGGPHVATPKQIREFMKVDGLTNDEVKSHLQKYRLHTRRP 240
Query: 106 GQA--NIGNNKIGP-VTVPGERMPEAN 129
Q N GN++ V V G +P+++
Sbjct: 241 RQTVPNNGNSQTQHFVVVGGLWVPQSD 267
>TAIR|locus:2008585 [details] [associations]
symbol:ARR11 "response regulator 11" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 KO:K14491 eggNOG:COG0745 InterPro:IPR017053
PIRSF:PIRSF036392 EMBL:AJ005194 EMBL:AC008113 EMBL:BT008768
EMBL:AB041532 IPI:IPI00521272 PIR:C96700 PIR:T52034 PIR:T52074
RefSeq:NP_176938.1 UniGene:At.121 ProteinModelPortal:Q9FXD6
SMR:Q9FXD6 IntAct:Q9FXD6 STRING:Q9FXD6 EnsemblPlants:AT1G67710.1
GeneID:843096 KEGG:ath:AT1G67710 GeneFarm:3922 TAIR:At1g67710
HOGENOM:HOG000116485 InParanoid:Q9FXD6 OMA:WITRYDE PhylomeDB:Q9FXD6
ProtClustDB:CLSN2914476 Genevestigator:Q9FXD6 GermOnline:AT1G67710
Uniprot:Q9FXD6
Length = 521
Score = 154 (59.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 38/98 (38%), Positives = 53/98 (54%)
Query: 4 HHQNQGKSMH-SSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFIEA 62
H G+ + R E+ L LQ S P S + K R+ W+ +LH +F+ A
Sbjct: 156 HFLGGGEDVSFGKKRKDFDFEKKL-LQDESDPSSS-----SSKKARVVWSFELHHKFVNA 209
Query: 63 VNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 100
VNQ+G KA PK ++ LM +P LT ++ SHLQKYRL
Sbjct: 210 VNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYRL 247
Score = 40 (19.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 241 PQANQPTDCSMDSCLTSCEGSQKDQEIHNGGVRLRPYHGTPTL 283
P+++ D LT +G ++ + N G++ + Y +P+L
Sbjct: 449 PESHHSVSLDTDLDLTWLQG---ERFLANTGLQFQDYSSSPSL 488
>TAIR|locus:2040194 [details] [associations]
symbol:RR12 "response regulator 12" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009736
"cytokinin mediated signaling pathway" evidence=IGI;TAS]
[GO:0009735 "response to cytokinin stimulus" evidence=IGI]
[GO:0010380 "regulation of chlorophyll biosynthetic process"
evidence=IGI] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0080022 "primary root development" evidence=IGI]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 GO:GO:0010380
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0080022
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0048367
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 KO:K14491 eggNOG:COG2204 HOGENOM:HOG000238840
GO:GO:0031537 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:BE522295
IPI:IPI00541861 IPI:IPI01019479 RefSeq:NP_180090.6 UniGene:At.19775
ProteinModelPortal:P62598 SMR:P62598 IntAct:P62598 STRING:P62598
GeneID:817056 KEGG:ath:AT2G25180 GeneFarm:3926 TAIR:At2g25180
InParanoid:P62598 OMA:QQAIMAN ArrayExpress:P62598
Genevestigator:P62598 GermOnline:AT2G25180 Uniprot:P62598
Length = 596
Score = 152 (58.6 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS-KNL 104
K R+ WT +LH++F+ AVNQLG +KA PK ++ LM + LT ++ SHLQK+RL K +
Sbjct: 195 KQRVVWTVELHKKFVAAVNQLG-YEKAMPKKILDLMNVEKLTRENVASHLQKFRLYLKRI 253
Query: 105 HGQAN 109
G AN
Sbjct: 254 SGVAN 258
Score = 42 (19.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 13/55 (23%), Positives = 22/55 (40%)
Query: 111 GNNKIGPVTVPGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQ 165
G+ + P PG ++ + N +S P H S +I Q +V H +
Sbjct: 414 GHPQATPPGFPGHQINKRLEHWSNAVSSSTHPPPPAHNSNSINHQFDVSPLPHSR 468
>UNIPROTKB|Q7Y0W3 [details] [associations]
symbol:Q7Y0W3 "Two-component response regulator EHD1"
species:39946 "Oryza sativa Indica Group" [GO:0003677 "DNA binding"
evidence=IDA] [GO:0048576 "positive regulation of short-day
photoperiodism, flowering" evidence=IMP] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0006355
GO:GO:0035556 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009908 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
eggNOG:NOG265546 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AB092508
ProteinModelPortal:Q7Y0W3 SMR:Q7Y0W3 KEGG:dosa:Os10t0463400-01
Gramene:Q7Y0W3 HOGENOM:HOG000084878 GO:GO:0048576 Uniprot:Q7Y0W3
Length = 341
Score = 142 (55.0 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 29/55 (52%), Positives = 36/55 (65%)
Query: 46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 100
K RL WT LH +FI AVN LG DKA PK ++ +M + LT + SHLQKYR+
Sbjct: 198 KSRLTWTTQLHRQFIAAVNHLG-EDKAVPKKILGIMKVKHLTREQVASHLQKYRM 251
>UNIPROTKB|Q7Y0W5 [details] [associations]
symbol:EHD1 "Two-component response regulator EHD1"
species:39947 "Oryza sativa Japonica Group" [GO:0048576 "positive
regulation of short-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
GO:GO:0005634 GO:GO:0006355 GO:GO:0035556 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:DP000086 EMBL:CM000147 GO:GO:0009908 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
InterPro:IPR017053 PIRSF:PIRSF036392 GO:GO:0048576 EMBL:AB092506
EMBL:AB092507 EMBL:AC027038 ProteinModelPortal:Q7Y0W5
Gramene:Q7Y0W5 eggNOG:KOG1601 Uniprot:Q7Y0W5
Length = 341
Score = 142 (55.0 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 29/55 (52%), Positives = 36/55 (65%)
Query: 46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 100
K RL WT LH +FI AVN LG DKA PK ++ +M + LT + SHLQKYR+
Sbjct: 198 KSRLTWTTQLHRQFIAAVNHLG-EDKAVPKKILGIMKVKHLTREQVASHLQKYRM 251
>TAIR|locus:2141020 [details] [associations]
symbol:APRR2 species:3702 "Arabidopsis thaliana"
[GO:0000156 "phosphorelay response regulator activity"
evidence=IEA;ISS] [GO:0000160 "phosphorelay signal transduction
system" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=RCA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009736 "cytokinin mediated signaling pathway" evidence=RCA]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL021889
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB041531
EMBL:AF385725 EMBL:AY143963 IPI:IPI00524902 IPI:IPI00542892
PIR:T05088 RefSeq:NP_001078405.1 RefSeq:NP_001154250.1
RefSeq:NP_001190759.1 RefSeq:NP_567548.1 RefSeq:NP_849403.1
RefSeq:NP_849404.2 UniGene:At.25394 ProteinModelPortal:Q6LA43
SMR:Q6LA43 IntAct:Q6LA43 STRING:Q6LA43 EnsemblPlants:AT4G18020.1
EnsemblPlants:AT4G18020.2 EnsemblPlants:AT4G18020.3
EnsemblPlants:AT4G18020.6 GeneID:827527 KEGG:ath:AT4G18020
GeneFarm:4314 TAIR:At4g18020 eggNOG:NOG268152 HOGENOM:HOG000005909
InParanoid:Q6LA43 OMA:TIMISTD PhylomeDB:Q6LA43
ProtClustDB:CLSN2689492 Genevestigator:Q6LA43 GermOnline:AT4G18020
Uniprot:Q6LA43
Length = 535
Score = 142 (55.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 26/61 (42%), Positives = 45/61 (73%)
Query: 45 AKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS-KN 103
++ ++ WTP+LH++F++AV QLG D+A P +++LM + LT +++ SHLQK+R KN
Sbjct: 295 SRKKVDWTPELHKKFVQAVEQLG-VDQAIPSRILELMKVGTLTRHNVASHLQKFRQHRKN 353
Query: 104 L 104
+
Sbjct: 354 I 354
>TAIR|locus:2116587 [details] [associations]
symbol:RR10 "response regulator 10" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=IGI;RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI] [GO:0010380 "regulation of chlorophyll biosynthetic
process" evidence=IGI] [GO:0031537 "regulation of anthocyanin
metabolic process" evidence=IGI;RCA] [GO:0048367 "shoot system
development" evidence=IGI] [GO:0080022 "primary root development"
evidence=IGI] [GO:0010029 "regulation of seed germination"
evidence=RCA] [GO:0048831 "regulation of shoot system development"
evidence=RCA] InterPro:IPR001005 InterPro:IPR001789
InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736
GO:GO:0080022 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0048367 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491 EMBL:AJ005195
EMBL:AL021636 EMBL:AL161580 EMBL:BT003158 IPI:IPI00544491
PIR:T04653 RefSeq:NP_194920.1 UniGene:At.122 PDB:1IRZ PDBsum:1IRZ
ProteinModelPortal:O49397 SMR:O49397 IntAct:O49397 STRING:O49397
PRIDE:O49397 EnsemblPlants:AT4G31920.1 GeneID:829322
KEGG:ath:AT4G31920 GeneFarm:2450 TAIR:At4g31920 eggNOG:COG2204
HOGENOM:HOG000238840 InParanoid:O49397 OMA:THELHNK PhylomeDB:O49397
ProtClustDB:CLSN2685991 EvolutionaryTrace:O49397
Genevestigator:O49397 GermOnline:AT4G31920 GO:GO:0031537
InterPro:IPR017053 PIRSF:PIRSF036392 Uniprot:O49397
Length = 552
Score = 137 (53.3 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 25/56 (44%), Positives = 40/56 (71%)
Query: 46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS 101
KPR+ WT +LH +F+ AV+ LG ++A PK ++ LM + LT ++ SHLQK+R++
Sbjct: 183 KPRVLWTHELHNKFLAAVDHLG-VERAVPKKILDLMNVDKLTRENVASHLQKFRVA 237
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.131 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 401 401 0.00098 117 3 11 23 0.46 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 49
No. of states in DFA: 617 (66 KB)
Total size of DFA: 262 KB (2139 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 41.55u 0.12s 41.67t Elapsed: 00:00:02
Total cpu time: 41.55u 0.12s 41.67t Elapsed: 00:00:02
Start: Mon May 20 20:23:55 2013 End: Mon May 20 20:23:57 2013