Query 015745
Match_columns 401
No_of_seqs 281 out of 1594
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 09:10:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015745.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015745hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03145 Protein phosphatase 2 100.0 1.4E-56 3.1E-61 443.2 36.0 306 82-399 56-364 (365)
2 KOG0697 Protein phosphatase 1B 100.0 1.4E-49 3.1E-54 363.7 23.0 271 88-367 19-295 (379)
3 PTZ00224 protein phosphatase 2 100.0 4.3E-46 9.4E-51 369.7 33.0 252 87-366 18-274 (381)
4 KOG0698 Serine/threonine prote 100.0 7E-46 1.5E-50 364.6 30.1 270 87-371 35-312 (330)
5 PF00481 PP2C: Protein phospha 100.0 4.9E-46 1.1E-50 353.6 16.9 249 92-355 1-254 (254)
6 COG0631 PTC1 Serine/threonine 100.0 1.9E-44 4.1E-49 343.7 23.8 248 87-366 4-255 (262)
7 PRK14559 putative protein seri 100.0 1.5E-40 3.3E-45 347.2 28.8 255 89-365 373-637 (645)
8 KOG0699 Serine/threonine prote 100.0 5.3E-41 1.1E-45 317.0 20.3 168 200-367 330-507 (542)
9 cd00143 PP2Cc Serine/threonine 100.0 2.3E-38 4.9E-43 298.5 28.2 249 92-362 2-254 (254)
10 smart00332 PP2Cc Serine/threon 100.0 1.6E-37 3.4E-42 293.6 29.6 248 89-360 4-255 (255)
11 KOG0700 Protein phosphatase 2C 100.0 1.5E-34 3.3E-39 279.8 18.7 226 126-351 96-379 (390)
12 KOG1323 Serine/threonine phosp 99.9 2.9E-26 6.3E-31 215.3 21.1 273 92-366 106-490 (493)
13 KOG1379 Serine/threonine prote 99.9 8.7E-20 1.9E-24 171.9 22.5 208 103-362 89-330 (330)
14 KOG0618 Serine/threonine phosp 99.8 1.4E-20 2.9E-25 197.6 15.9 245 90-366 521-775 (1081)
15 PF13672 PP2C_2: Protein phosp 99.8 3.4E-20 7.5E-25 171.0 15.5 186 95-329 2-195 (212)
16 smart00331 PP2C_SIG Sigma fact 99.8 8.3E-18 1.8E-22 152.8 20.9 163 126-347 27-192 (193)
17 TIGR02865 spore_II_E stage II 99.7 5.2E-15 1.1E-19 160.0 21.6 193 99-362 561-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.5 1.7E-12 3.7E-17 117.6 21.1 177 128-363 3-193 (193)
19 COG2208 RsbU Serine phosphatas 98.4 3E-05 6.6E-10 77.7 19.7 176 128-363 174-366 (367)
20 PF09436 DUF2016: Domain of un 38.9 19 0.00041 27.3 1.5 18 300-318 26-43 (72)
21 COG3700 AphA Acid phosphatase 33.0 90 0.0019 28.2 4.9 49 301-350 71-130 (237)
22 PRK15322 invasion protein OrgB 29.7 1.9E+02 0.004 26.6 6.5 52 296-348 142-194 (210)
23 COG2168 DsrH Uncharacterized c 26.9 50 0.0011 26.5 2.1 53 297-357 21-73 (96)
24 COG1539 FolB Dihydroneopterin 24.9 3.7E+02 0.0081 22.4 7.2 62 307-370 43-106 (121)
25 PRK10693 response regulator of 20.9 7.5E+02 0.016 23.7 9.8 51 179-232 207-259 (303)
26 smart00331 PP2C_SIG Sigma fact 20.3 5.7E+02 0.012 22.2 9.5 67 296-363 24-95 (193)
No 1
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=1.4e-56 Score=443.23 Aligned_cols=306 Identities=52% Similarity=0.884 Sum_probs=260.2
Q ss_pred ccccccccceeEEEEeeecCCCCCCcceEEeccCccCCCCCccCCCCCeEEEEEeCCCChhHHHHHHHHHHHHHHhccCC
Q 015745 82 SAVLQFVPSIRSGSFADIGPRRYMEDEHVCIDDLSSHLGPCFKFPKPNAFYGVFDGHGGPEAAAYIRKNVMRFLFEDVSF 161 (401)
Q Consensus 82 ~~~~~~~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~aV~DG~GG~~~g~~as~~~~~~l~~~~~~ 161 (401)
.....+.|.++++++|++|.|++|||++++..++..+.+.......+..||+|||||||+.+|++|++++.+.|.+...+
T Consensus 56 ~~~~~~~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~ 135 (365)
T PLN03145 56 NMDTEFIPVVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDF 135 (365)
T ss_pred cchhhccCceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhcc
Confidence 33446778999999999999999999998877654322211122234679999999999999999999999998764322
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhccC--CCCCCceEEEEEEEcCeEEEEEcCccceEEeecCeeeecCCCC
Q 015745 162 PQSSEEDDVFLEGVESSLRKAYLMADQALADDCSV--SSSSGTTALTAMIFGRFLMVANAGDCRAVLCRKGEAIDLSQDH 239 (401)
Q Consensus 162 ~~~~~~~~~~~~~~~~~l~~a~~~a~~~l~~~~~~--~~~~GTT~~~~~i~~~~l~vanvGDSRayl~r~g~~~~LT~DH 239 (401)
. ..+.++|.++|..++..+.+.... ...+|||++++++.++++|++|+||||+|++++|++++||+||
T Consensus 136 ~----------~~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH 205 (365)
T PLN03145 136 P----------REIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDH 205 (365)
T ss_pred c----------hhHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCC
Confidence 1 367788999999999998765432 2569999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHcCCeeccceecCccccccccCCCCccCCC-CCCCCceeeeEEEEEEecCCCeEEEEEcCcccccCCH
Q 015745 240 RPIYPSERRRVEELGGYVDDGYLNGVLSVSRALGDWDMKLPR-GSSSPLIAEPEFQQMVLTEGDEFLIIGCDGIWDVMSS 318 (401)
Q Consensus 240 ~p~~~~E~~ri~~~Gg~v~~~~~~g~l~ltralGd~~~k~~~-~~~~~v~~~pdi~~~~L~~gD~fLVL~SDGlwd~l~~ 318 (401)
+|.++.|+.||.+.||.+..+++++.+++||+|||+.+|..+ ..+.+++++|++..++|.++|.|||||||||||+|++
T Consensus 206 ~~~~~~E~~RI~~~Gg~v~~g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ 285 (365)
T PLN03145 206 KPMCSKERKRIEASGGYVYDGYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRS 285 (365)
T ss_pred CCCCHHHHHHHHHcCCceecceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCH
Confidence 999999999999999999999999999999999998876432 1224578999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHhCCCCCceeEEEEEecCCCCCCCCCcccccccccccCHHHHHHHHhhhcCC
Q 015745 319 QHAVSLVLRGLRRHDDPEQCARDLVMEALRLNTFDNLTVIIVCFTSLDHREPSPPRQRRMRCCSLSAEALCSLRSLLDGN 398 (401)
Q Consensus 319 ~ei~~il~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (401)
+++.++++..+....+++++|+.|++.|+.+++.||+|+|||+|+...++....++++..| ++|+|.|..||++|++-
T Consensus 286 ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 363 (365)
T PLN03145 286 QNAVDFARRRLQEHNDPVMCSKELVDEALKRKSGDNLAVVVVCFQSQPPPNLVAPRPRVQR--SISAEGLRELQSFLDSL 363 (365)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCCCEEEEEEEeecCCCcccccccccccc--ccCHHHHHHHHHhhhcc
Confidence 9999999887777789999999999999999999999999999998766655555555555 78999999999999864
Q ss_pred C
Q 015745 399 D 399 (401)
Q Consensus 399 ~ 399 (401)
+
T Consensus 364 ~ 364 (365)
T PLN03145 364 A 364 (365)
T ss_pred C
Confidence 4
No 2
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-49 Score=363.74 Aligned_cols=271 Identities=34% Similarity=0.566 Sum_probs=241.0
Q ss_pred ccceeEEEEeeecCCCCCCcceEEeccCccCCCCCccCCCCCeEEEEEeCCCChhHHHHHHHHHHHHHHhccCCCCCCCc
Q 015745 88 VPSIRSGSFADIGPRRYMEDEHVCIDDLSSHLGPCFKFPKPNAFYGVFDGHGGPEAAAYIRKNVMRFLFEDVSFPQSSEE 167 (401)
Q Consensus 88 ~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~aV~DG~GG~~~g~~as~~~~~~l~~~~~~~~~~~~ 167 (401)
...++||..|.+|||-.|||++.....+.. ...+|+||||||||.|+..+.++++++.+.+...-.|.....
T Consensus 19 GNglryg~SSMQGWR~eMEDah~A~~~l~~-------~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~F~~~~k- 90 (379)
T KOG0697|consen 19 GNGLRYGVSSMQGWRVEMEDAHTAVAGLPS-------PLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEEFRGMTK- 90 (379)
T ss_pred CCceeeeeccccchhhhhhhhhhhhhcCCC-------CccCceEEEEEcCccchHHHHHHHHHHHHHhhhhHHHhhhcc-
Confidence 468999999999999999999987655532 135789999999999999999999999999977655443221
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhcc---CCCCCCceEEEEEEEcCeEEEEEcCccceEEeecCeeeecCCCCCCCCH
Q 015745 168 DDVFLEGVESSLRKAYLMADQALADDCS---VSSSSGTTALTAMIFGRFLMVANAGDCRAVLCRKGEAIDLSQDHRPIYP 244 (401)
Q Consensus 168 ~~~~~~~~~~~l~~a~~~a~~~l~~~~~---~~~~~GTT~~~~~i~~~~l~vanvGDSRayl~r~g~~~~LT~DH~p~~~ 244 (401)
+...+.+++-|+..|..+++.+..... ...++|||++++++...++|++|+||||++++|+|+.+.-|+||+|.++
T Consensus 91 -~gsv~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng~~~f~TqDHKP~~p 169 (379)
T KOG0697|consen 91 -NGSVENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNGEVVFSTQDHKPYLP 169 (379)
T ss_pred -CCcHHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhheecCCceEEeccCCCCCCh
Confidence 113478899999999999987765443 3367999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCeeccceecCccccccccCCCCccCCCCCC---CCceeeeEEEEEEecCCCeEEEEEcCcccccCCHHHH
Q 015745 245 SERRRVEELGGYVDDGYLNGVLSVSRALGDWDMKLPRGSS---SPLIAEPEFQQMVLTEGDEFLIIGCDGIWDVMSSQHA 321 (401)
Q Consensus 245 ~E~~ri~~~Gg~v~~~~~~g~l~ltralGd~~~k~~~~~~---~~v~~~pdi~~~~L~~gD~fLVL~SDGlwd~l~~~ei 321 (401)
.|++||+.+||.+.-.+++|.|+++|||||++||.-.+++ +.|+++|++..+...+.|.||||+||||||+|+++|+
T Consensus 170 ~EkeRIqnAGGSVMIqRvNGsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~eedeFivlACDGIwDVMtneel 249 (379)
T KOG0697|consen 170 KEKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDEFIVLACDGIWDVMTNEEL 249 (379)
T ss_pred HHHHHHhcCCCeEEEEEecceeeeehhccCcccccCCCCCchhcccCCCCceEEeeccccCcEEEEEccchhhhcccHHH
Confidence 9999999999999999999999999999999999766554 6899999999999988888999999999999999999
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHhCCCCCceeEEEEEecCCCC
Q 015745 322 VSLVLRGLRRHDDPEQCARDLVMEALRLNTFDNLTVIIVCFTSLDH 367 (401)
Q Consensus 322 ~~il~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~~ 367 (401)
+++++..+.-+.|+..+|+..++..+-+|++||+|+|+|+|...+.
T Consensus 250 cefv~sRl~Vt~dL~~vcn~VvDtCLhKGSRDNMsivlvcfp~APk 295 (379)
T KOG0697|consen 250 CEFVKSRLEVTSDLEEVCNDVVDTCLHKGSRDNMSIVLVCFPGAPK 295 (379)
T ss_pred HHHHHhhheecccHHHHHHHHHHHHHhccCccCceEEEEecCCCCC
Confidence 9999999999999999999999999999999999999999976544
No 3
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=4.3e-46 Score=369.74 Aligned_cols=252 Identities=30% Similarity=0.477 Sum_probs=216.5
Q ss_pred cccceeEEEEeeecCCCCCCcceEEeccCccCCCCCccCCCCCeEEEEEeCCCChhHHHHHHHHHHHHHHhccCCCCCCC
Q 015745 87 FVPSIRSGSFADIGPRRYMEDEHVCIDDLSSHLGPCFKFPKPNAFYGVFDGHGGPEAAAYIRKNVMRFLFEDVSFPQSSE 166 (401)
Q Consensus 87 ~~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~aV~DG~GG~~~g~~as~~~~~~l~~~~~~~~~~~ 166 (401)
.+..+++|+.|++|.|++|||++++..+ .+..+|+|||||||..+++++++.+.+.+.+....
T Consensus 18 ~~~~~~~g~~s~~G~R~~nED~~~v~~~------------~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~~~----- 80 (381)
T PTZ00224 18 GNSIFRCASACVNGYRESMEDAHLLYLT------------DDWGFFGVFDGHVNDECSQYLARAWPQALEKEPEP----- 80 (381)
T ss_pred CCccEEEEEEeCCCCCCCCCCeeEeccC------------CCceEEEEEeCCCcHHHHHHHHHHHHHHHHhcccc-----
Confidence 4678999999999999999999876321 13459999999999999999999998777543111
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCceEEEEEEE-cCeEEEEEcCccceEEeecCeeeecCCCCCCCCHH
Q 015745 167 EDDVFLEGVESSLRKAYLMADQALADDCSVSSSSGTTALTAMIF-GRFLMVANAGDCRAVLCRKGEAIDLSQDHRPIYPS 245 (401)
Q Consensus 167 ~~~~~~~~~~~~l~~a~~~a~~~l~~~~~~~~~~GTT~~~~~i~-~~~l~vanvGDSRayl~r~g~~~~LT~DH~p~~~~ 245 (401)
...+.|++++..+|..+.+.. ..+|||+++++|. +.+++++|+||||+|++|+|++++||+||+|.++.
T Consensus 81 -------~~~~~l~~a~~~~d~~i~~~~---~~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~ 150 (381)
T PTZ00224 81 -------MTDERMEELCLEIDEEWMDSG---REGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGKLVFATEDHKPNNPG 150 (381)
T ss_pred -------ccHHHHHHHHHHHHHHHHhcc---cCCCCeEEEEEEEECCEEEEEEcccceEEEEECCEEEEcccCCCCCCHH
Confidence 112348889999999988643 2469999998886 57999999999999999999999999999999999
Q ss_pred HHHHHHHcCCeeccceecCccccccccCCCCccCCCC---CCCCceeeeEEEEEEecCCCeEEEEEcCcccc-cCCHHHH
Q 015745 246 ERRRVEELGGYVDDGYLNGVLSVSRALGDWDMKLPRG---SSSPLIAEPEFQQMVLTEGDEFLIIGCDGIWD-VMSSQHA 321 (401)
Q Consensus 246 E~~ri~~~Gg~v~~~~~~g~l~ltralGd~~~k~~~~---~~~~v~~~pdi~~~~L~~gD~fLVL~SDGlwd-~l~~~ei 321 (401)
|+.||.+.||.+..++.+|.+.+||+||+..+|.+.. ....++++|++..+.+.++| ||||||||||| +++++|+
T Consensus 151 E~~RI~~~gg~v~~~Rv~G~l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l~~~D-~llLaSDGL~d~~ls~eEi 229 (381)
T PTZ00224 151 ERQRIEACGGRVVSNRVDGDLAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTHLTCQSND-FIILACDGVFEGNFSNEEV 229 (381)
T ss_pred HHhHHHHccCEeccccccCceeeecccCCcccccccccccccCcceeeeEEEEEECCCCC-EEEEECCCcCcCccCHHHH
Confidence 9999999999999888999999999999999886542 23467899999999999988 78899999999 8999999
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHhCCCCCceeEEEEEecCCC
Q 015745 322 VSLVLRGLRRHDDPEQCARDLVMEALRLNTFDNLTVIIVCFTSLD 366 (401)
Q Consensus 322 ~~il~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~ 366 (401)
.+++.+.+....+++.+|+.|++.|+.+|+.||||+|||++....
T Consensus 230 ~~iv~~~l~~~~~~~~aA~~Lv~~A~~rGs~DNITvIvV~~~~~~ 274 (381)
T PTZ00224 230 VAFVKEQLETCDDLAVVAGRVCDEAIRRGSKDNISCLIVQLKDGA 274 (381)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCCCEEEEEEEeeCCC
Confidence 999987666677899999999999999999999999999998664
No 4
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-46 Score=364.61 Aligned_cols=270 Identities=43% Similarity=0.634 Sum_probs=231.1
Q ss_pred cccceeEEEE-eeecCCCCCCcceEEeccCccCCCCCccCCCCCeEEEEEeCCCChhHHHHHHHHHHHHHHhccCCCCCC
Q 015745 87 FVPSIRSGSF-ADIGPRRYMEDEHVCIDDLSSHLGPCFKFPKPNAFYGVFDGHGGPEAAAYIRKNVMRFLFEDVSFPQSS 165 (401)
Q Consensus 87 ~~~~~~~~~~-s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~aV~DG~GG~~~g~~as~~~~~~l~~~~~~~~~~ 165 (401)
..+.+..++. +.+|+|+.|||.+....++.... .......+||||||||||+.+|+|+.+++...+.+...+....
T Consensus 35 ~~~~~~~~~~~~~~~~r~~med~~~~~~~~~~~~---~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~ 111 (330)
T KOG0698|consen 35 INESYRLGSLLSIRGRRRKMEDRHVQLPDFLEED---VGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDR 111 (330)
T ss_pred ccccccceEEEecCCCCCccCcceeecccccccc---cCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccch
Confidence 3445555555 77888999999998877654211 1111257899999999999999999999999999887665422
Q ss_pred CchhhHHHHHHHHHHHHHH-HHHHHHHhhccCCCCCCceEEEEEEEcC-eEEEEEcCccceEEeecC-eeeecCCCCCCC
Q 015745 166 EEDDVFLEGVESSLRKAYL-MADQALADDCSVSSSSGTTALTAMIFGR-FLMVANAGDCRAVLCRKG-EAIDLSQDHRPI 242 (401)
Q Consensus 166 ~~~~~~~~~~~~~l~~a~~-~a~~~l~~~~~~~~~~GTT~~~~~i~~~-~l~vanvGDSRayl~r~g-~~~~LT~DH~p~ 242 (401)
.....+++++|. .++..+.+.......+|||++++++..+ ++|+||+|||||+|+++| ..++||.||+|.
T Consensus 112 -------~~~~~a~~~~F~~~~D~~~~~~~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~ 184 (330)
T KOG0698|consen 112 -------QDVKDALRRAFLTKTDSEFLEKREDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPD 184 (330)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHhhccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCC
Confidence 468899999999 6999998762224688999998888855 999999999999999876 799999999999
Q ss_pred CHHHHHHHHHcCCeecc----ceecCccccccccCCCCccCCCCCCCCceeeeEEEEEEecCCCeEEEEEcCcccccCCH
Q 015745 243 YPSERRRVEELGGYVDD----GYLNGVLSVSRALGDWDMKLPRGSSSPLIAEPEFQQMVLTEGDEFLIIGCDGIWDVMSS 318 (401)
Q Consensus 243 ~~~E~~ri~~~Gg~v~~----~~~~g~l~ltralGd~~~k~~~~~~~~v~~~pdi~~~~L~~gD~fLVL~SDGlwd~l~~ 318 (401)
.+.|+.||+++||++.. .+.+|.++++|+|||..+|. ++++++|++....+.+.|.||||+||||||+|++
T Consensus 185 ~~~E~~RI~~~GG~v~~~~~~~Rv~G~LavsRa~GD~~~k~-----~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~ 259 (330)
T KOG0698|consen 185 REDERERIEAAGGRVSNWGGVWRVNGVLAVSRAFGDVELKS-----QGVIAEPEIQQVKINSDDEFLILASDGIWDVVSN 259 (330)
T ss_pred cHHHHHHHHHcCCEEEEcCCcceEeceEEEeeecCCHHhcC-----CcEecCCceEEEEcCCCCcEEEEeCCchhcccCh
Confidence 99999999999999995 38999999999999999884 6889999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHhCCCCCceeEEEEEecCCCCCCCC
Q 015745 319 QHAVSLVLRGLRRHDDPEQCARDLVMEALRLNTFDNLTVIIVCFTSLDHREPS 371 (401)
Q Consensus 319 ~ei~~il~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~~~~~~ 371 (401)
+|++++++..+.....+..++..|...|..+++.||||||||+|.+.......
T Consensus 260 qeav~~V~~~~~~~~~~~~a~~~l~~~a~~~~s~DnitvvvV~l~~~~~~~~~ 312 (330)
T KOG0698|consen 260 QEAVDLVRDELASISSPLAAAKLLATEALSRGSKDNITVVVVRLKSSPKSPSS 312 (330)
T ss_pred HHHHHHHHHHhhccccHHHHHHHHHHHHhhcCCCCCeEEEEEEecCccccccC
Confidence 99999998876567799999999999999999999999999999988765444
No 5
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=4.9e-46 Score=353.63 Aligned_cols=249 Identities=45% Similarity=0.740 Sum_probs=207.7
Q ss_pred eEEEEeeecCCCCCCcceEEeccCccCCCCCccCCCCCeEEEEEeCCCChhHHHHHHHHHHHHHHhccCCCCCCCchhhH
Q 015745 92 RSGSFADIGPRRYMEDEHVCIDDLSSHLGPCFKFPKPNAFYGVFDGHGGPEAAAYIRKNVMRFLFEDVSFPQSSEEDDVF 171 (401)
Q Consensus 92 ~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~aV~DG~GG~~~g~~as~~~~~~l~~~~~~~~~~~~~~~~ 171 (401)
.+++.+..|.|++|||.+++..++... .......+|+|||||||..+++++++.+.+.+.+...+...
T Consensus 1 ~~~~~~~~g~r~~~eD~~~~~~~~~~~-----~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~------- 68 (254)
T PF00481_consen 1 DYGVSSMQGVRKEMEDRHLIIQNFNSN-----SGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDG------- 68 (254)
T ss_dssp EEEEEEEECTSSSHHEEEEEEEEETCC-----TTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTC-------
T ss_pred CcCeecCCCCCCcccCEEEEecCcccc-----CCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccc-------
Confidence 468889999999999999998766421 11245679999999999999999999999888766443221
Q ss_pred HHHHHHHHHHHHHH-HHHHHHhhcc--CCCCCCceEEEEEEEcCeEEEEEcCccceEEeecCeee-ecCCCCCCCCHHHH
Q 015745 172 LEGVESSLRKAYLM-ADQALADDCS--VSSSSGTTALTAMIFGRFLMVANAGDCRAVLCRKGEAI-DLSQDHRPIYPSER 247 (401)
Q Consensus 172 ~~~~~~~l~~a~~~-a~~~l~~~~~--~~~~~GTT~~~~~i~~~~l~vanvGDSRayl~r~g~~~-~LT~DH~p~~~~E~ 247 (401)
..+.+.|..+|.. ++..+..... ....+|||+++++|.++++|+||+||||+|+++.+... +||+||+|.++.|+
T Consensus 69 -~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~~~Lt~dH~~~~~~E~ 147 (254)
T PF00481_consen 69 -NDIEEALRQAFLAFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGIIKQLTRDHKPSNPDER 147 (254)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEEEESS---STTSHHHH
T ss_pred -cchhhcccceeeecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeeccccccccccccccchhhcc
Confidence 2678899999999 8888876322 34789999999999999999999999999999999888 99999999999999
Q ss_pred HHHHHcCCeec-cceecCccccccccCCCCccCCCCCCCCceeeeEEEEEEecCCCeEEEEEcCcccccCCHHHHHHHHH
Q 015745 248 RRVEELGGYVD-DGYLNGVLSVSRALGDWDMKLPRGSSSPLIAEPEFQQMVLTEGDEFLIIGCDGIWDVMSSQHAVSLVL 326 (401)
Q Consensus 248 ~ri~~~Gg~v~-~~~~~g~l~ltralGd~~~k~~~~~~~~v~~~pdi~~~~L~~gD~fLVL~SDGlwd~l~~~ei~~il~ 326 (401)
.||+++||.+. .+++.|.+++||+|||..+|.+. +.+|+++|++..+++.++|.|||||||||||+|+++|+.++++
T Consensus 148 ~RI~~~gg~v~~~~rv~g~l~~sRalGd~~~k~~~--~~~v~~~P~i~~~~l~~~d~flvlaSDGlwd~l~~~ei~~~v~ 225 (254)
T PF00481_consen 148 ERIRKAGGRVSENGRVNGVLAVSRALGDFDLKPPG--KPGVIAEPDISEVDLTPDDEFLVLASDGLWDVLSNEEIVDIVR 225 (254)
T ss_dssp HHHHHTT-GEEETEEETTTBSSSB-EE-GGGTTCT--SSSSB---EEEEEEEBTTEEEEEEE-HHHHTTSHHHHHHHHHH
T ss_pred ceeeccccccccchhhhhccccccccccccccccc--cceeeeecccccccccccceEEEEEcccccccCCHHHHHHHHH
Confidence 99999999999 78999999999999999998533 4689999999999999999999999999999999999999999
Q ss_pred HHhcCCCCHHHHHHHHHHHHHhCCCCCce
Q 015745 327 RGLRRHDDPEQCARDLVMEALRLNTFDNL 355 (401)
Q Consensus 327 ~~l~~~~~~~~~a~~Lv~~A~~~g~~DNi 355 (401)
+.......|+.+|+.|+++|+.+|+.|||
T Consensus 226 ~~~~~~~~~~~~a~~L~~~A~~~gs~DNi 254 (254)
T PF00481_consen 226 ESLNSGRSPQEAAEKLVDEAIARGSKDNI 254 (254)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHTTHHSHE
T ss_pred HHHhcCCcHHHHHHHHHHHHHhcCCCCCC
Confidence 87665557999999999999999999997
No 6
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-44 Score=343.66 Aligned_cols=248 Identities=30% Similarity=0.432 Sum_probs=208.1
Q ss_pred cccceeEEEEeeecC-CCCCCcceEEeccCccCCCCCccCCCCCeEEEEEeCCCChhHHHHHHHHHHHHHHhccCCCCCC
Q 015745 87 FVPSIRSGSFADIGP-RRYMEDEHVCIDDLSSHLGPCFKFPKPNAFYGVFDGHGGPEAAAYIRKNVMRFLFEDVSFPQSS 165 (401)
Q Consensus 87 ~~~~~~~~~~s~~G~-R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~aV~DG~GG~~~g~~as~~~~~~l~~~~~~~~~~ 165 (401)
....+.+++.|+.|. |..|||.+++..+... .. ..||+|||||||+.+|++||+++++.|.+.+......
T Consensus 4 ~~~~~~~~~~s~~g~~R~~NeD~~~~~~~~~~--------~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~ 74 (262)
T COG0631 4 GILSLKVAGLSDVGTVRKHNEDAFLIKPNENG--------NL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFN 74 (262)
T ss_pred ccceeeeeeeccCCCccCCCCcceeeccccCC--------cc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhcccc
Confidence 346788899999997 7789999988542111 11 4699999999999999999999999999886543322
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHhhcc---CCCCCCceEEEEEEEcCeEEEEEcCccceEEeecCeeeecCCCCCCC
Q 015745 166 EEDDVFLEGVESSLRKAYLMADQALADDCS---VSSSSGTTALTAMIFGRFLMVANAGDCRAVLCRKGEAIDLSQDHRPI 242 (401)
Q Consensus 166 ~~~~~~~~~~~~~l~~a~~~a~~~l~~~~~---~~~~~GTT~~~~~i~~~~l~vanvGDSRayl~r~g~~~~LT~DH~p~ 242 (401)
... +.+.+++.+++..++..+..... ....||||++++++.++++|+|||||||+|++|+|.+++||.||++.
T Consensus 75 ~~~----~~~~~~l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~~~~lT~DH~~~ 150 (262)
T COG0631 75 SLN----ESLEELLKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGELKQLTEDHSLV 150 (262)
T ss_pred ccc----hhHHHHHHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCceEEeccCCcHH
Confidence 211 12789999999999999988764 33899999999999999999999999999999999999999999987
Q ss_pred CHHHHHHHHHcCCeeccceecCccccccccCCCCccCCCCCCCCceeeeEEEEEEecCCCeEEEEEcCcccccCCHHHHH
Q 015745 243 YPSERRRVEELGGYVDDGYLNGVLSVSRALGDWDMKLPRGSSSPLIAEPEFQQMVLTEGDEFLIIGCDGIWDVMSSQHAV 322 (401)
Q Consensus 243 ~~~E~~ri~~~Gg~v~~~~~~g~l~ltralGd~~~k~~~~~~~~v~~~pdi~~~~L~~gD~fLVL~SDGlwd~l~~~ei~ 322 (401)
+..++.++...++.. .++.++++||+||+.+ .+.|++....+.++| |||||||||||.++++++.
T Consensus 151 ~~~~~~~~~~~~~~~---~~~~~~~ltralG~~~-----------~~~p~~~~~~~~~~d-~llL~SDGl~d~v~~~~i~ 215 (262)
T COG0631 151 NRLEQRGIITPEEAR---SHPRRNALTRALGDFD-----------LLEPDITELELEPGD-FLLLCSDGLWDVVSDDEIV 215 (262)
T ss_pred HHHHHhcCCCHHHHH---hCccchhhhhhcCCCc-----------ccceeEEEEEcCCCC-EEEEECCCCccCcCHHHHH
Confidence 777776643333322 2577779999999988 478999999999996 7779999999999999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHhCCCCCceeEEEEEecCCC
Q 015745 323 SLVLRGLRRHDDPEQCARDLVMEALRLNTFDNLTVIIVCFTSLD 366 (401)
Q Consensus 323 ~il~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~ 366 (401)
++++ ...++++++++|++.|+.+|+.||+|+++|.+....
T Consensus 216 ~il~----~~~~~~~~~~~li~~a~~~g~~DNiT~ilv~~~~~~ 255 (262)
T COG0631 216 DILK----NSETPQEAADKLIELALEGGGPDNITVVLVRLNGEG 255 (262)
T ss_pred HHHh----cCCCHHHHHHHHHHHHHhcCCCCceEEEEEEeeccc
Confidence 9994 368999999999999999999999999999998765
No 7
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=1.5e-40 Score=347.23 Aligned_cols=255 Identities=24% Similarity=0.268 Sum_probs=191.0
Q ss_pred cceeEEEEeeecC-CCCCCcceEEeccCccCCCCCccCCCCCeEEEEEeCCCChhHHHHHHHHHHHHHHhccCCCCCCCc
Q 015745 89 PSIRSGSFADIGP-RRYMEDEHVCIDDLSSHLGPCFKFPKPNAFYGVFDGHGGPEAAAYIRKNVMRFLFEDVSFPQSSEE 167 (401)
Q Consensus 89 ~~~~~~~~s~~G~-R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~aV~DG~GG~~~g~~as~~~~~~l~~~~~~~~~~~~ 167 (401)
..++++++|++|. |++|||++++..++...............+|+|||||||+.+|++||+.+++.|.+.+.......
T Consensus 373 ~~l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~- 451 (645)
T PRK14559 373 VSLEDAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDE- 451 (645)
T ss_pred eeEEEEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhccc-
Confidence 4688999999996 89999988765433111000000112346999999999999999999999999876553211110
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhcc-----CCCCCCceEEEEEEEcCeEEEEEcCccceEEe-ecCeeeecCCCCCC
Q 015745 168 DDVFLEGVESSLRKAYLMADQALADDCS-----VSSSSGTTALTAMIFGRFLMVANAGDCRAVLC-RKGEAIDLSQDHRP 241 (401)
Q Consensus 168 ~~~~~~~~~~~l~~a~~~a~~~l~~~~~-----~~~~~GTT~~~~~i~~~~l~vanvGDSRayl~-r~g~~~~LT~DH~p 241 (401)
....+.++++|..+|..|.+... ....||||++++++.++++|++||||||+|++ |+|++++||+||++
T Consensus 452 -----~~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g~l~QLT~DHs~ 526 (645)
T PRK14559 452 -----LPDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKGGLEQLTVDHEV 526 (645)
T ss_pred -----ccHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCCeEEEeCCCCCH
Confidence 01256789999999999976542 22579999999999999999999999999998 56899999999985
Q ss_pred CCHHHHHHHHHcCCeecc--ceecCccccccccCCCCccCCCCCCCCceeeeEEEEEEecCCCeEEEEEcCccccc-CCH
Q 015745 242 IYPSERRRVEELGGYVDD--GYLNGVLSVSRALGDWDMKLPRGSSSPLIAEPEFQQMVLTEGDEFLIIGCDGIWDV-MSS 318 (401)
Q Consensus 242 ~~~~E~~ri~~~Gg~v~~--~~~~g~l~ltralGd~~~k~~~~~~~~v~~~pdi~~~~L~~gD~fLVL~SDGlwd~-l~~ 318 (401)
. .++.+.| .... ..+++++.+||+||+...+ ..+|++..+.+.++| +||||||||||+ +.+
T Consensus 527 ~-----~~lv~~G-i~~~~a~~~p~~~~LTrALG~~~~~---------~l~Pdi~~~~L~~gD-~lLLCSDGL~D~~~ve 590 (645)
T PRK14559 527 G-----QREIQRG-VEPQIAYARPDAYQLTQALGPRDNS---------AIQPDIQFLEIEEDT-LLLLCSDGLSDNDLLE 590 (645)
T ss_pred H-----HHHHHhC-CCHHHHhcCcccceeeeccCCCCCC---------cccceEEEEEcCCCC-EEEEECCCCCCCcccc
Confidence 4 2334445 2221 2357889999999987643 468999999999988 555999999995 333
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHhCCCCCceeEEEEEecCC
Q 015745 319 QHAVSLVLRGLRRHDDPEQCARDLVMEALRLNTFDNLTVIIVCFTSL 365 (401)
Q Consensus 319 ~ei~~il~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~ 365 (401)
.++.+.+...+....++++++++|++.|+.+|++||+|+|+|++...
T Consensus 591 ~~~~~~l~~il~~~~~l~~aa~~Li~~Al~~gg~DNITvIvV~l~~~ 637 (645)
T PRK14559 591 THWQTHLLPLLSSSANLDQGLNKLIDLANQYNGHDNITAILVRLKVR 637 (645)
T ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCCcEEEEEEEeccC
Confidence 33333344444566789999999999999999999999999999644
No 8
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-41 Score=316.99 Aligned_cols=168 Identities=40% Similarity=0.632 Sum_probs=158.2
Q ss_pred CCceEEEEEEEcCeEEEEEcCccceEEeecCeeeecCCCCCCCCHHHHHHHHHcCCeec-cceecCccccccccCCCCcc
Q 015745 200 SGTTALTAMIFGRFLMVANAGDCRAVLCRKGEAIDLSQDHRPIYPSERRRVEELGGYVD-DGYLNGVLSVSRALGDWDMK 278 (401)
Q Consensus 200 ~GTT~~~~~i~~~~l~vanvGDSRayl~r~g~~~~LT~DH~p~~~~E~~ri~~~Gg~v~-~~~~~g~l~ltralGd~~~k 278 (401)
+|||++++++.+++|||||+||||+++.|.|+.+.|+.||+|....|..||.++||.+. +++++|.|+++|+|||..||
T Consensus 330 SGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtlDGRVNGGLNLSRA~GDHaYK 409 (542)
T KOG0699|consen 330 SGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTLDGRVNGGLNLSRAFGDHAYK 409 (542)
T ss_pred CCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEeecceecCccchhhhhhhhhhh
Confidence 39999999999999999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred CCCCCC---CCceeeeEEEEEEecCCCeEEEEEcCcccccCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhCC-----
Q 015745 279 LPRGSS---SPLIAEPEFQQMVLTEGDEFLIIGCDGIWDVMSSQHAVSLVLRGLRRHDDPEQCARDLVMEALRLN----- 350 (401)
Q Consensus 279 ~~~~~~---~~v~~~pdi~~~~L~~gD~fLVL~SDGlwd~l~~~ei~~il~~~l~~~~~~~~~a~~Lv~~A~~~g----- 350 (401)
..+..+ +.|++-|+|....|++.|.|+||+|||||++|+.++++++++..+..+.....+|++|.+..+.-.
T Consensus 410 ~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~n~~ls~iceeL~D~CLAp~T~GDG 489 (542)
T KOG0699|consen 410 KNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAKNSSLSEICEELCDACLAPSTDGDG 489 (542)
T ss_pred cccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhcCchHHHHHHHHHHhhcCCCCCCCC
Confidence 876554 688999999999999999999999999999999999999999999999999999999999999642
Q ss_pred -CCCceeEEEEEecCCCC
Q 015745 351 -TFDNLTVIIVCFTSLDH 367 (401)
Q Consensus 351 -~~DNiTvIvv~l~~~~~ 367 (401)
+.||+|+|++.|.+-..
T Consensus 490 TGCDNMT~ii~~Fkrk~~ 507 (542)
T KOG0699|consen 490 TGCDNMTVIITTFKRKSK 507 (542)
T ss_pred cCCCcceEEEEEeccchh
Confidence 68999999999995544
No 9
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=2.3e-38 Score=298.49 Aligned_cols=249 Identities=42% Similarity=0.704 Sum_probs=211.4
Q ss_pred eEEEEeeecCCCCCCcceEEeccCccCCCCCccCCCCCeEEEEEeCCCChhHHHHHHHHHHHHHHhccCCCCCCCchhhH
Q 015745 92 RSGSFADIGPRRYMEDEHVCIDDLSSHLGPCFKFPKPNAFYGVFDGHGGPEAAAYIRKNVMRFLFEDVSFPQSSEEDDVF 171 (401)
Q Consensus 92 ~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~aV~DG~GG~~~g~~as~~~~~~l~~~~~~~~~~~~~~~~ 171 (401)
.++..+..|.|..|||++++...... .+..+|+|||||||+..|++|++.+++.+.+.+..... ..
T Consensus 2 ~~~~~~~~g~r~~neD~~~~~~~~~~---------~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~-----~~ 67 (254)
T cd00143 2 SAGVSDKGGDRKTNEDAVVIKPNLNN---------EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLT-----LS 67 (254)
T ss_pred ceeeecCCCCCCCCcceEEEeccCCC---------CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccc-----cc
Confidence 35666677789999999987443210 24579999999999999999999999999877643321 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcc---CCCCCCceEEEEEEEcCeEEEEEcCccceEEeecCeeeecCCCCCCCCHHHHH
Q 015745 172 LEGVESSLRKAYLMADQALADDCS---VSSSSGTTALTAMIFGRFLMVANAGDCRAVLCRKGEAIDLSQDHRPIYPSERR 248 (401)
Q Consensus 172 ~~~~~~~l~~a~~~a~~~l~~~~~---~~~~~GTT~~~~~i~~~~l~vanvGDSRayl~r~g~~~~LT~DH~p~~~~E~~ 248 (401)
...+...|+++|..+++.+..... ....+|||++++++.+++++++|+||||+|++++++++++|.||++..+.++.
T Consensus 68 ~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~~~lt~dh~~~~~~~~~ 147 (254)
T cd00143 68 EEDIEEALRKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEERE 147 (254)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCceeEcCCCCCCcChHHHH
Confidence 257788999999999999987654 33789999999999999999999999999999999999999999999989999
Q ss_pred HHHHcCCeeccceecCccccccccCCCCccCCCCCCCCceeeeEEEEEEe-cCCCeEEEEEcCcccccCCHHHHHHHHHH
Q 015745 249 RVEELGGYVDDGYLNGVLSVSRALGDWDMKLPRGSSSPLIAEPEFQQMVL-TEGDEFLIIGCDGIWDVMSSQHAVSLVLR 327 (401)
Q Consensus 249 ri~~~Gg~v~~~~~~g~l~ltralGd~~~k~~~~~~~~v~~~pdi~~~~L-~~gD~fLVL~SDGlwd~l~~~ei~~il~~ 327 (401)
|+...++.+.....++++.+||+||+..+| .++..+|++...++ .++| +|+||||||||+++++++.+++..
T Consensus 148 ~i~~~~~~~~~~~~~~~~~~t~~lG~~~~~------~~~~~~~~~~~~~l~~~~d-~ill~SDG~~~~l~~~~i~~~~~~ 220 (254)
T cd00143 148 RIEKAGGRVSNGRVPGVLAVTRALGDFDLK------PGVSAEPDVTVVKLTEDDD-FLILASDGLWDVLSNQEAVDIVRS 220 (254)
T ss_pred HHHHcCCcEEeCEEcCceeeccccCCcccc------CCEEcCCeEEEEEeCCCCc-EEEEECCCCeeccChHHHHHHHHH
Confidence 999999988878889999999999998765 34578999999999 8888 566999999999999999999975
Q ss_pred HhcCCCCHHHHHHHHHHHHHhCCCCCceeEEEEEe
Q 015745 328 GLRRHDDPEQCARDLVMEALRLNTFDNLTVIIVCF 362 (401)
Q Consensus 328 ~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l 362 (401)
... ..+++++|++|++.|..+++.||+|+|++.+
T Consensus 221 ~~~-~~~~~~~a~~l~~~a~~~~~~Dn~t~i~~~~ 254 (254)
T cd00143 221 ELA-KEDLQEAAQELVDLALRRGSHDNITVVVVRL 254 (254)
T ss_pred Hhc-ccCHHHHHHHHHHHHHhCCCCCCEEEEEEeC
Confidence 311 1279999999999999999999999999875
No 10
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=1.6e-37 Score=293.62 Aligned_cols=248 Identities=46% Similarity=0.747 Sum_probs=210.6
Q ss_pred cceeEEEEeeecCCCCCCcceEEeccCccCCCCCccCCCCCeEEEEEeCCCChhHHHHHHHHHHHHHHhccCCCCCCCch
Q 015745 89 PSIRSGSFADIGPRRYMEDEHVCIDDLSSHLGPCFKFPKPNAFYGVFDGHGGPEAAAYIRKNVMRFLFEDVSFPQSSEED 168 (401)
Q Consensus 89 ~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~aV~DG~GG~~~g~~as~~~~~~l~~~~~~~~~~~~~ 168 (401)
..+.++..+..|.|..|||.+++..++. .+..+|+|||||||..+++++++.+.+.+.+........
T Consensus 4 ~~~~~~~~~~~~~r~~neD~~~~~~~~~----------~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~--- 70 (255)
T smart00332 4 LGLRYGLSSMQGVRKPMEDAHVITPDLS----------DSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDE--- 70 (255)
T ss_pred CceeEEEecCCCCCCCCcceEEEeccCC----------CCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccc---
Confidence 4566677666778999999887754321 356799999999999999999999999887654322210
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCC---CCCCceEEEEEEEcCeEEEEEcCccceEEeecCeeeecCCCCCCCCHH
Q 015745 169 DVFLEGVESSLRKAYLMADQALADDCSVS---SSSGTTALTAMIFGRFLMVANAGDCRAVLCRKGEAIDLSQDHRPIYPS 245 (401)
Q Consensus 169 ~~~~~~~~~~l~~a~~~a~~~l~~~~~~~---~~~GTT~~~~~i~~~~l~vanvGDSRayl~r~g~~~~LT~DH~p~~~~ 245 (401)
...+.+.|++++..++..+....... ..+|||++++++.+++++++|+||||+|++|++++.++|.||++....
T Consensus 71 ---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~~~~lt~dh~~~~~~ 147 (255)
T smart00332 71 ---LEDVEEALRKAFLKTDEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAVQLTEDHKPSNED 147 (255)
T ss_pred ---hhHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCceeEcCCCCCCcCHH
Confidence 13577889999999999998765432 579999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCeeccceecCccccccccCCCCccCCCCCCCCceeeeEEEEEEe-cCCCeEEEEEcCcccccCCHHHHHHH
Q 015745 246 ERRRVEELGGYVDDGYLNGVLSVSRALGDWDMKLPRGSSSPLIAEPEFQQMVL-TEGDEFLIIGCDGIWDVMSSQHAVSL 324 (401)
Q Consensus 246 E~~ri~~~Gg~v~~~~~~g~l~ltralGd~~~k~~~~~~~~v~~~pdi~~~~L-~~gD~fLVL~SDGlwd~l~~~ei~~i 324 (401)
|..||...++.+..+++++.+.+||++|+..+| +.+..+|++...++ .++| +||||||||||+++++++.++
T Consensus 148 ~~~~i~~~~~~~~~~~~~~~~~lt~~~g~~~~~------~~i~~~p~~~~~~~~~~~d-~ill~SDGv~~~l~~~~i~~~ 220 (255)
T smart00332 148 ERARIEAAGGFVINGRVNGVLALSRAIGDFFLK------PYVSAEPDVTVVELTEKDD-FLILASDGLWDVLSNQEVVDI 220 (255)
T ss_pred HHHHHHHcCCEEECCeECCeEecccccCCHhhc------CCeEeeeEEEEEEecCCCc-EEEEECCccccCCCHHHHHHH
Confidence 999999999999888999999999999998765 56678999999996 7888 566999999999999999999
Q ss_pred HHHHhcCCCCHHHHHHHHHHHHHhCCCCCceeEEEE
Q 015745 325 VLRGLRRHDDPEQCARDLVMEALRLNTFDNLTVIIV 360 (401)
Q Consensus 325 l~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv 360 (401)
+.+.... .++.++++.|++.|..+++.||+|+|+|
T Consensus 221 ~~~~~~~-~~~~~~~~~l~~~a~~~~~~Dn~T~ivv 255 (255)
T smart00332 221 VRKHLSK-SDPEEAAKRLIDLALARGSKDNITVIVV 255 (255)
T ss_pred HHHHhhc-CCHHHHHHHHHHHHHHcCCCCCeEEEEC
Confidence 9764322 3799999999999999999999999985
No 11
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=279.76 Aligned_cols=226 Identities=32% Similarity=0.480 Sum_probs=184.3
Q ss_pred CCCCeEEEEEeCCCChhHHHHHHHHHHHHHHhccC---------CCCCC---------------CchhhHHHHHHHHHHH
Q 015745 126 PKPNAFYGVFDGHGGPEAAAYIRKNVMRFLFEDVS---------FPQSS---------------EEDDVFLEGVESSLRK 181 (401)
Q Consensus 126 ~~~~~l~aV~DG~GG~~~g~~as~~~~~~l~~~~~---------~~~~~---------------~~~~~~~~~~~~~l~~ 181 (401)
.+++.|+||||||||++++++.++++..++...+. +.... .........+.++|.+
T Consensus 96 ~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~ 175 (390)
T KOG0700|consen 96 ENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSK 175 (390)
T ss_pred cCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHH
Confidence 56788999999999999999999999998873221 11100 0000113678899999
Q ss_pred HHHHHHHHHHhhccC-------CCCCCceEEEEEEEcCeEEEEEcCccceEEeec---C---eeeecCCCCCCCCHHHHH
Q 015745 182 AYLMADQALADDCSV-------SSSSGTTALTAMIFGRFLMVANAGDCRAVLCRK---G---EAIDLSQDHRPIYPSERR 248 (401)
Q Consensus 182 a~~~a~~~l~~~~~~-------~~~~GTT~~~~~i~~~~l~vanvGDSRayl~r~---g---~~~~LT~DH~p~~~~E~~ 248 (401)
||.++++.+...... -..+|++++++++.+..+||||+|||||+|.+. | ..+|||.||+.++++|++
T Consensus 176 Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dHn~~ne~Ev~ 255 (390)
T KOG0700|consen 176 AFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDHNASNEDEVR 255 (390)
T ss_pred HHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEecChhhccccHHHHH
Confidence 999999998654431 278899999999999999999999999999653 3 468999999999999999
Q ss_pred HHHHcCC----eecc--ceecCccccccccCCCCccCCCC---------------CCCCceeeeEEEEEEecCCCeEEEE
Q 015745 249 RVEELGG----YVDD--GYLNGVLSVSRALGDWDMKLPRG---------------SSSPLIAEPEFQQMVLTEGDEFLII 307 (401)
Q Consensus 249 ri~~~Gg----~v~~--~~~~g~l~ltralGd~~~k~~~~---------------~~~~v~~~pdi~~~~L~~gD~fLVL 307 (401)
||+.... .+.. .++.|.+.+||||||..+|.|.- .++.++++|.++.++|.+.|+||||
T Consensus 256 Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIl 335 (390)
T KOG0700|consen 256 RIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLIL 335 (390)
T ss_pred HHHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEE
Confidence 9999884 3333 48999999999999999998753 3488999999999999999999999
Q ss_pred EcCcccccCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhCCC
Q 015745 308 GCDGIWDVMSSQHAVSLVLRGLRRHDDPEQCARDLVMEALRLNT 351 (401)
Q Consensus 308 ~SDGlwd~l~~~ei~~il~~~l~~~~~~~~~a~~Lv~~A~~~g~ 351 (401)
+|||||++|+++|+++++..++.....-+.+|+.|+++|+.+..
T Consensus 336 ASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~aL~~aa 379 (390)
T KOG0700|consen 336 ASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRHALGRAA 379 (390)
T ss_pred eccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHHHHhhhh
Confidence 99999999999999999988765433345689999999987643
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.95 E-value=2.9e-26 Score=215.26 Aligned_cols=273 Identities=29% Similarity=0.411 Sum_probs=195.6
Q ss_pred eEEEEeeecCCCCCCcceEEeccCccC-CCCCccCCCCCeEEEEEeCCCChhHHHHHHHHHHHHHHhccC----C-----
Q 015745 92 RSGSFADIGPRRYMEDEHVCIDDLSSH-LGPCFKFPKPNAFYGVFDGHGGPEAAAYIRKNVMRFLFEDVS----F----- 161 (401)
Q Consensus 92 ~~~~~s~~G~R~~nED~~~~~~~~~~~-~~~~~~~~~~~~l~aV~DG~GG~~~g~~as~~~~~~l~~~~~----~----- 161 (401)
+-|.-|.+-+|.+|.|+-.....-... ..+.+....+.++|.+||||.|..++-.|++.+.+.+.+.+. .
T Consensus 106 ~~gs~t~~~n~n~~~~~~~l~~g~~~~~k~~~~a~~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~ 185 (493)
T KOG1323|consen 106 HQGSETRKRNSNENDDDPMLTPGGDDTVKSSMFAPRADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMD 185 (493)
T ss_pred ccCccccCCCCCccccCcCCCCCCCcchhhcccCCCCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhc
Confidence 334445444555566655443322211 112233345678999999999999999999988887765431 0
Q ss_pred -CC--------------CCC-----chhh-HHHHHHHHHHHHHHHHHHHHHhhccCC-CCCCceEEEEEEEcCeEEEEEc
Q 015745 162 -PQ--------------SSE-----EDDV-FLEGVESSLRKAYLMADQALADDCSVS-SSSGTTALTAMIFGRFLMVANA 219 (401)
Q Consensus 162 -~~--------------~~~-----~~~~-~~~~~~~~l~~a~~~a~~~l~~~~~~~-~~~GTT~~~~~i~~~~l~vanv 219 (401)
.. ..+ .... ...-+..+|+.||+..++.|..+.... ...|||+++++..-+++|++|+
T Consensus 186 ~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LViGAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNA 265 (493)
T KOG1323|consen 186 RHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLVIGALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANA 265 (493)
T ss_pred cccccccccccccCCcccccccchhhccCchHHhhHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccC
Confidence 00 000 0001 112467789999999999998765433 7789999999999999999999
Q ss_pred CccceEEeecCeeeecCCCCCCCCHHHHHHHHHcC--------Ceecc--------------------------------
Q 015745 220 GDCRAVLCRKGEAIDLSQDHRPIYPSERRRVEELG--------GYVDD-------------------------------- 259 (401)
Q Consensus 220 GDSRayl~r~g~~~~LT~DH~p~~~~E~~ri~~~G--------g~v~~-------------------------------- 259 (401)
||||++++|+++++.|+++.+|. .|++|++..+ +....
T Consensus 266 GDsRAIlVrndeirplS~efTPe--tERqRlQ~Laf~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve 343 (493)
T KOG1323|consen 266 GDSRAILVRNDEIRPLSKEFTPE--TERQRLQELAFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVE 343 (493)
T ss_pred CCceEEEEecCCeeecccccCcH--HHHHHHHHHhhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhh
Confidence 99999999999999999999965 7889988754 11100
Q ss_pred ---------------ceecCccccccccCCCCccCCC---CCCCCceeeeEEEEEEecC----CCeEEEEEcCcccccCC
Q 015745 260 ---------------GYLNGVLSVSRALGDWDMKLPR---GSSSPLIAEPEFQQMVLTE----GDEFLIIGCDGIWDVMS 317 (401)
Q Consensus 260 ---------------~~~~g~l~ltralGd~~~k~~~---~~~~~v~~~pdi~~~~L~~----gD~fLVL~SDGlwd~l~ 317 (401)
.++-+.+.+||.|||..+|.-. ...+.+.+.|++....|.. .|.++||+||||||+++
T Consensus 344 ~~DLr~pLI~gegrkaRll~TigVsRGlGDH~Lkv~dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlS 423 (493)
T KOG1323|consen 344 EEDLRFPLISGEGRKARLLATIGVSRGLGDHHLKVVDSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLS 423 (493)
T ss_pred hhcCCcceecccchhhhhhhhheeccccCcceeeeecCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcc
Confidence 0122346799999999988543 3457788889999888753 23488899999999999
Q ss_pred HHHHHHHHHHHhcCCC--CH---HHHHHHHHHHHHh-------------CCCCCceeEEEEEecCCC
Q 015745 318 SQHAVSLVLRGLRRHD--DP---EQCARDLVMEALR-------------LNTFDNLTVIIVCFTSLD 366 (401)
Q Consensus 318 ~~ei~~il~~~l~~~~--~~---~~~a~~Lv~~A~~-------------~g~~DNiTvIvv~l~~~~ 366 (401)
++|+..+++..+.... || ..+|+.|+..|.. .|+.|+|||.||-+....
T Consensus 424 neeva~~Vrs~L~~~dp~Dp~RYt~aaqdlva~arg~~k~rgWr~~n~~lgSgDDIsVfVIPL~~~~ 490 (493)
T KOG1323|consen 424 NEEVALIVRSFLPSTDPADPSRYTQAAQDLVAAARGQQKDRGWRMNNGGLGSGDDISVFVIPLKYCA 490 (493)
T ss_pred cHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcCccCCCceeccCCCcCCCCceEEEEEeccCCC
Confidence 9999999999876543 44 3578888888752 257899999999886543
No 13
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.86 E-value=8.7e-20 Score=171.92 Aligned_cols=208 Identities=21% Similarity=0.234 Sum_probs=141.2
Q ss_pred CCCCcceEEeccCccCCCCCccCCCCCeEEEEEeCCCChh-----HHHHHHHHHHHHHHhccCCCCCCCchhhHHHHHHH
Q 015745 103 RYMEDEHVCIDDLSSHLGPCFKFPKPNAFYGVFDGHGGPE-----AAAYIRKNVMRFLFEDVSFPQSSEEDDVFLEGVES 177 (401)
Q Consensus 103 ~~nED~~~~~~~~~~~~~~~~~~~~~~~l~aV~DG~GG~~-----~g~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 177 (401)
+.-||++++..+. ...+.+||||+||+. .|.| |+.+++...+......... .++..
T Consensus 89 ~~GEDa~Fvss~~------------~~~v~GVADGVGGWa~~GiDpg~f-S~eLM~~ce~~v~~~~~~~------~~P~~ 149 (330)
T KOG1379|consen 89 KGGEDAWFVSSNP------------HAIVMGVADGVGGWAEYGIDPGAF-SRELMSNCERLVQNSDFNP------SDPVN 149 (330)
T ss_pred CCCCcceeeccCc------------ccceEEEccccchHhhcCcCHHHH-HHHHHHHHHHHhcccccCC------CChHH
Confidence 3458999885542 335899999999874 4544 4444444443332211111 24555
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCceEEEEEEE--cCeEEEEEcCccceEEeecCeeeecCCCCCCCCHHHHHHHHHcCC
Q 015745 178 SLRKAYLMADQALADDCSVSSSSGTTALTAMIF--GRFLMVANAGDCRAVLCRKGEAIDLSQDHRPIYPSERRRVEELGG 255 (401)
Q Consensus 178 ~l~~a~~~a~~~l~~~~~~~~~~GTT~~~~~i~--~~~l~vanvGDSRayl~r~g~~~~LT~DH~p~~~~E~~ri~~~Gg 255 (401)
.|.+++ .++.+.. ...-.+||++++.+. +++|++||+|||-..++|+|++++-|..+...
T Consensus 150 lL~~ay----~~l~~~~-~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H~------------- 211 (330)
T KOG1379|consen 150 LLEKAY----AELKSQK-VPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQHY------------- 211 (330)
T ss_pred HHHHHH----HHHhhcC-CCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchheec-------------
Confidence 555555 3443321 224467899999998 88999999999999999999999999886411
Q ss_pred eeccce---ecCccccccccCCCCccCCCCCCCCceeeeEEEEEEecCCCeEEEEEcCcccccCCHHHHHHHHHHHhc-C
Q 015745 256 YVDDGY---LNGVLSVSRALGDWDMKLPRGSSSPLIAEPEFQQMVLTEGDEFLIIGCDGIWDVMSSQHAVSLVLRGLR-R 331 (401)
Q Consensus 256 ~v~~~~---~~g~l~ltralGd~~~k~~~~~~~~v~~~pdi~~~~L~~gD~fLVL~SDGlwd~l~~~ei~~il~~~l~-~ 331 (401)
....+ .+... ...+++|.. -.-+...+.+.+|| +|||+||||||+|.+++|.+++..... .
T Consensus 212 -FN~PyQLs~~p~~-~~~~~~d~p------------~~ad~~~~~v~~GD-vIilATDGlfDNl~e~~Il~il~~~~~~~ 276 (330)
T KOG1379|consen 212 -FNTPYQLSSPPEG-YSSYISDVP------------DSADVTSFDVQKGD-VIILATDGLFDNLPEKEILSILKGLDARG 276 (330)
T ss_pred -cCCceeeccCCcc-ccccccCCc------------cccceEEEeccCCC-EEEEecccccccccHHHHHHHHHHhhccc
Confidence 00000 00000 022334332 23578899999999 566999999999999999999988766 6
Q ss_pred CCCHHHHHHHHHHHHHh-----------------------CCCCCceeEEEEEe
Q 015745 332 HDDPEQCARDLVMEALR-----------------------LNTFDNLTVIIVCF 362 (401)
Q Consensus 332 ~~~~~~~a~~Lv~~A~~-----------------------~g~~DNiTvIvv~l 362 (401)
..+++..|+++.+.|.. .|..|+||+|+..+
T Consensus 277 ~~~lq~~A~~ia~~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 277 NLDLQVTAQKIAEKARELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred cccHHHHHHHHHHHHHHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence 67899999999998873 23489999998753
No 14
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.85 E-value=1.4e-20 Score=197.58 Aligned_cols=245 Identities=27% Similarity=0.477 Sum_probs=206.0
Q ss_pred ceeEEEEeeecCCCCCCcceEEeccCccCCCCCccCCCCCeEEEEEeCCCChhHHHHHHHHHHHHHHhccCCCCCCCchh
Q 015745 90 SIRSGSFADIGPRRYMEDEHVCIDDLSSHLGPCFKFPKPNAFYGVFDGHGGPEAAAYIRKNVMRFLFEDVSFPQSSEEDD 169 (401)
Q Consensus 90 ~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~aV~DG~GG~~~g~~as~~~~~~l~~~~~~~~~~~~~~ 169 (401)
-|++|++-..|.|.++--+...+.++.. ++.+.|+++||-+......+....+..++.+......
T Consensus 521 ~~t~Gv~~~~gqrnk~c~~~~~v~nf~~---------~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~------ 585 (1081)
T KOG0618|consen 521 LWTYGVAGVSGQRNKVCSRAVWVENFFL---------NPQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYG------ 585 (1081)
T ss_pred heeeccchhcccccchhhhhhhhhhccc---------CCcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhcc------
Confidence 4557888888999988887777666543 4567999999999998888888888888877654332
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCceEEEEEEEc--------CeEEEEEcCccceEEeecCeeeecCCCC-C
Q 015745 170 VFLEGVESSLRKAYLMADQALADDCSVSSSSGTTALTAMIFG--------RFLMVANAGDCRAVLCRKGEAIDLSQDH-R 240 (401)
Q Consensus 170 ~~~~~~~~~l~~a~~~a~~~l~~~~~~~~~~GTT~~~~~i~~--------~~l~vanvGDSRayl~r~g~~~~LT~DH-~ 240 (401)
+-.+.|+.+|...++++...+ ...|..++.+.|.. .++++||+|+|.++++++|+-.++|+-. .
T Consensus 586 ----~et~~mr~~fl~~~rklg~~g---~~lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c~avls~ng~~~p~t~~~~~ 658 (1081)
T KOG0618|consen 586 ----NETEQMRNTFLRLNRKLGEEG---QVLGGSVVLCQIVEDSLSPASSKTLFAANVGTCMAVLSRNGKPLPTTRSPML 658 (1081)
T ss_pred ----ChHHHHHHHHHHHhhhhhhhh---ccccchhhheeecccccCcccchhhhHhhhccchhhhhhcCCcCcccccccc
Confidence 112349999999999995543 45566666666664 3789999999999999999988887775 4
Q ss_pred CCCHHHHHHHHHcCCeec-cceecCccccccccCCCCccCCCCCCCCceeeeEEEEEEecCCCeEEEEEcCcccccCCHH
Q 015745 241 PIYPSERRRVEELGGYVD-DGYLNGVLSVSRALGDWDMKLPRGSSSPLIAEPEFQQMVLTEGDEFLIIGCDGIWDVMSSQ 319 (401)
Q Consensus 241 p~~~~E~~ri~~~Gg~v~-~~~~~g~l~ltralGd~~~k~~~~~~~~v~~~pdi~~~~L~~gD~fLVL~SDGlwd~l~~~ 319 (401)
...++|.+||...+|++. +++.+|+...||++|.+... +.+.+.|++..+.|.+.|+|||+++-++|++|+-+
T Consensus 659 ~v~~eE~~RI~~~~g~i~ed~k~ngvt~~tR~iG~~~l~------P~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid 732 (1081)
T KOG0618|consen 659 EVDREEYKRIVDSKGFITEDNKLNGVTSSTRAIGPFSLF------PHVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSID 732 (1081)
T ss_pred cCCHHHHHHHHHhcCeecCCCeeeceeeeeeeccccccc------ccccCCCceeeEecccCceEEEEcchHHhhhccHH
Confidence 558999999999999999 68899999999999988754 57899999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHhCCCCCceeEEEEEecCCC
Q 015745 320 HAVSLVLRGLRRHDDPEQCARDLVMEALRLNTFDNLTVIIVCFTSLD 366 (401)
Q Consensus 320 ei~~il~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~ 366 (401)
++++.++ +..+|-.+|++|.+.|..+|..||++|+||++....
T Consensus 733 ~a~~~vR----n~~dpL~AAkKL~d~AqSYgc~~nv~vlVv~l~~~~ 775 (1081)
T KOG0618|consen 733 TAVDAVR----NVEDPLLAAKKLCDLAQSYGCAENVSVLVVRLNHLE 775 (1081)
T ss_pred HHHHHHh----cCCchHHHHHHHHHHHHhcccccCeeEEEEEeecch
Confidence 9999995 568999999999999999999999999999986543
No 15
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.84 E-value=3.4e-20 Score=170.98 Aligned_cols=186 Identities=22% Similarity=0.239 Sum_probs=104.7
Q ss_pred EEeeecCCCCCCcceEEeccCccCCCCCccCCCCCeEEEEEeCCCChhHHHHHHHHHHHHHHhccCCCCCCCchhhHHHH
Q 015745 95 SFADIGPRRYMEDEHVCIDDLSSHLGPCFKFPKPNAFYGVFDGHGGPEAAAYIRKNVMRFLFEDVSFPQSSEEDDVFLEG 174 (401)
Q Consensus 95 ~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~aV~DG~GG~~~g~~as~~~~~~l~~~~~~~~~~~~~~~~~~~ 174 (401)
+.+++|.+..|||++.+... .+..+++||||+||...|+.+|+.+++.+.+.+.......... .
T Consensus 2 G~sh~~~~~~nqD~~~~~~~------------~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~----~ 65 (212)
T PF13672_consen 2 GRSHRGRGAPNQDAFGIRTD------------DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPS----S 65 (212)
T ss_dssp -----TTSSS--EEEEEE-T------------CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHH----H
T ss_pred CccccCCCCCCCCCEEeeeC------------CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchH----H
Confidence 35889999999999975322 2345779999999999999999999998877654333221110 0
Q ss_pred HHHHHHHHHHHHHHHH------HhhccCCCCCCceEEEEEEEcCeEEEEEcCccceEE-eecCeeeecCCCCCCCCHHHH
Q 015745 175 VESSLRKAYLMADQAL------ADDCSVSSSSGTTALTAMIFGRFLMVANAGDCRAVL-CRKGEAIDLSQDHRPIYPSER 247 (401)
Q Consensus 175 ~~~~l~~a~~~a~~~l------~~~~~~~~~~GTT~~~~~i~~~~l~vanvGDSRayl-~r~g~~~~LT~DH~p~~~~E~ 247 (401)
..+.++.+...+...+ .........++||++++++.++.++++|+||||+|+ .++|++..++.||+ .+.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l~~~~~----~~~ 141 (212)
T PF13672_consen 66 IEALIRAIKKEILSIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQLTDDHS----GEY 141 (212)
T ss_dssp HHHHHHHHHHHHHHHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-S---B----HHH
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEcCCCcc----chh
Confidence 1222222222222111 111223478899999999999999999999999965 57899999999996 111
Q ss_pred HHHHHcCCeeccceecCccccccccCCCCccCCCCCCCCceeeeEEEEEEecCCCeEEEEEcCcccccCCHHH-HHHHHH
Q 015745 248 RRVEELGGYVDDGYLNGVLSVSRALGDWDMKLPRGSSSPLIAEPEFQQMVLTEGDEFLIIGCDGIWDVMSSQH-AVSLVL 326 (401)
Q Consensus 248 ~ri~~~Gg~v~~~~~~g~l~ltralGd~~~k~~~~~~~~v~~~pdi~~~~L~~gD~fLVL~SDGlwd~l~~~e-i~~il~ 326 (401)
.+ .++.+..... ....++..+++.++|.|| |||||||+.+...+ +..++.
T Consensus 142 ~~------------------~~~~~~~~~~----------~~~~~~~~~~~~~~d~il-L~SDG~~~~l~~~~~~~~~l~ 192 (212)
T PF13672_consen 142 PN------------------QTRSLTGDDP----------EPDVQYGSIPLEEGDVIL-LCSDGVWDNLRSYEDLEQFLK 192 (212)
T ss_dssp HH------------------CTTSCCHHCC----------CTETEEEEEE--TT-EEE-EE-HHHHTTS-HHHHHHHH--
T ss_pred hh------------------hhhccCcccc----------ccCCeEEEEEcCCCCEEE-EECcCccccCCCHHHHHHHhh
Confidence 11 1333332210 233467778889999665 99999999998654 677775
Q ss_pred HHh
Q 015745 327 RGL 329 (401)
Q Consensus 327 ~~l 329 (401)
..+
T Consensus 193 ~~~ 195 (212)
T PF13672_consen 193 DLW 195 (212)
T ss_dssp ---
T ss_pred hcc
Confidence 543
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.80 E-value=8.3e-18 Score=152.80 Aligned_cols=163 Identities=23% Similarity=0.216 Sum_probs=126.9
Q ss_pred CCCCeEEEEEeCCCChhHHHHHHHHHHHHHHhccCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCceEE
Q 015745 126 PKPNAFYGVFDGHGGPEAAAYIRKNVMRFLFEDVSFPQSSEEDDVFLEGVESSLRKAYLMADQALADDCSVSSSSGTTAL 205 (401)
Q Consensus 126 ~~~~~l~aV~DG~GG~~~g~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~a~~~l~~~~~~~~~~GTT~~ 205 (401)
+.+..+|+|+||||+...|.+++..+...+.+..... ..+.+.+..+|+.+... ....+|+|++
T Consensus 27 ~~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~--------------~~~~~~l~~~n~~l~~~--~~~~~~~T~~ 90 (193)
T smart00331 27 PEGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEG--------------ISLSQILERLNRAIYEN--GEDGMFATLF 90 (193)
T ss_pred CCCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcC--------------CCHHHHHHHHHHHHHhc--CCCCcEEEEE
Confidence 3446799999999999999999999999887654321 12455666777777664 2356899999
Q ss_pred EEEE--EcCeEEEEEcCccceEEee-cCeeeecCCCCCCCCHHHHHHHHHcCCeeccceecCccccccccCCCCccCCCC
Q 015745 206 TAMI--FGRFLMVANAGDCRAVLCR-KGEAIDLSQDHRPIYPSERRRVEELGGYVDDGYLNGVLSVSRALGDWDMKLPRG 282 (401)
Q Consensus 206 ~~~i--~~~~l~vanvGDSRayl~r-~g~~~~LT~DH~p~~~~E~~ri~~~Gg~v~~~~~~g~l~ltralGd~~~k~~~~ 282 (401)
++++ ..++++++|+||+|+|+++ ++..++.+.+. +..+|...
T Consensus 91 ~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~-----------------------------~~~lG~~~------ 135 (193)
T smart00331 91 LALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDL-----------------------------GAPLGLEP------ 135 (193)
T ss_pred EEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCC-----------------------------CceeeeCC------
Confidence 9998 5789999999999999999 56666666553 35677654
Q ss_pred CCCCceeeeEEEEEEecCCCeEEEEEcCcccccCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 015745 283 SSSPLIAEPEFQQMVLTEGDEFLIIGCDGIWDVMSSQHAVSLVLRGLRRHDDPEQCARDLVMEAL 347 (401)
Q Consensus 283 ~~~~v~~~pdi~~~~L~~gD~fLVL~SDGlwd~l~~~ei~~il~~~l~~~~~~~~~a~~Lv~~A~ 347 (401)
..+++...+++.+||.++ |+||||||.+..+++.+++.+.. ..+++++++++.+.+.
T Consensus 136 -----~~~~~~~~~~l~~gd~l~-l~TDGl~e~~~~~~l~~~l~~~~--~~~~~~~~~~i~~~~~ 192 (193)
T smart00331 136 -----DVEVDVRELTLEPGDLLL-LYTDGLTEARNPERLEELLEELL--GSPPAEIAQRILEELL 192 (193)
T ss_pred -----CCcceeEEEeeCCCCEEE-EECCCccccCChHHHHHHHHHhc--CCCHHHHHHHHHHHHh
Confidence 345778889999999655 99999999999999999997642 4578899988888764
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.66 E-value=5.2e-15 Score=160.01 Aligned_cols=193 Identities=18% Similarity=0.153 Sum_probs=141.1
Q ss_pred ecCCCCCCcceEEeccCccCCCCCccCCCCCeEEEEEeCCCChhHHHHHHHHHHHHHHhccCCCCCCCchhhHHHHHHHH
Q 015745 99 IGPRRYMEDEHVCIDDLSSHLGPCFKFPKPNAFYGVFDGHGGPEAAAYIRKNVMRFLFEDVSFPQSSEEDDVFLEGVESS 178 (401)
Q Consensus 99 ~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~aV~DG~GG~~~g~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 178 (401)
++.+..+.|.+.+.. .+++...++|+||||+...|..++..+++.+.+...... .
T Consensus 561 k~g~~vsGD~y~~~~-----------l~~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g~--------------~ 615 (764)
T TIGR02865 561 KDGELVSGDSYSFGK-----------LSAGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESGF--------------D 615 (764)
T ss_pred CCCCcccCceEEEEE-----------ECCCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcCC--------------C
Confidence 344667778765432 233456899999999888888889888888765443211 0
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCceEEEEEEE--cCeEEEEEcCccceEEeecCeeeecCCCCCCCCHHHHHHHHHcCCe
Q 015745 179 LRKAYLMADQALADDCSVSSSSGTTALTAMIF--GRFLMVANAGDCRAVLCRKGEAIDLSQDHRPIYPSERRRVEELGGY 256 (401)
Q Consensus 179 l~~a~~~a~~~l~~~~~~~~~~GTT~~~~~i~--~~~l~vanvGDSRayl~r~g~~~~LT~DH~p~~~~E~~ri~~~Gg~ 256 (401)
...++..+|..+... ....+.+|+.+++++ .+++.++|+|+++.|+.|++++..++..+-|
T Consensus 616 ~~~ai~~lN~~L~~~--~~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i~s~~lP--------------- 678 (764)
T TIGR02865 616 REVAIKTVNSILSLR--STDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVIRSSNLP--------------- 678 (764)
T ss_pred HHHHHHHHHHHHHhC--CCCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECCEEEEecCCCce---------------
Confidence 355667777776543 224578999999986 6899999999999999999988888755421
Q ss_pred eccceecCccccccccCCCCccCCCCCCCCceeeeEEEEEEecCCCeEEEEEcCcccccCCHHH-----HHHHHHHHhcC
Q 015745 257 VDDGYLNGVLSVSRALGDWDMKLPRGSSSPLIAEPEFQQMVLTEGDEFLIIGCDGIWDVMSSQH-----AVSLVLRGLRR 331 (401)
Q Consensus 257 v~~~~~~g~l~ltralGd~~~k~~~~~~~~v~~~pdi~~~~L~~gD~fLVL~SDGlwd~l~~~e-----i~~il~~~l~~ 331 (401)
+|-.. ..+++....++.+||. |||+|||+||..++.+ +.+++.. ..
T Consensus 679 ---------------lGil~-----------~~~~~~~~~~L~~GD~-Lll~SDGv~E~~~~~~~~~~~l~~~l~~--~~ 729 (764)
T TIGR02865 679 ---------------IGILD-----------EVDVELVRKKLKNGDL-IVMVSDGVLEGEKEVEGKVLWLVRKLKE--TN 729 (764)
T ss_pred ---------------eEecc-----------CCccceEEEEeCCCCE-EEEECCCCCcCCcccccHHHHHHHHHHh--cC
Confidence 34322 3456778889999995 5599999999886533 5555543 23
Q ss_pred CCCHHHHHHHHHHHHHhCC---CCCceeEEEEEe
Q 015745 332 HDDPEQCARDLVMEALRLN---TFDNLTVIIVCF 362 (401)
Q Consensus 332 ~~~~~~~a~~Lv~~A~~~g---~~DNiTvIvv~l 362 (401)
..+|+++++.|++++.... ..||+|++++++
T Consensus 730 ~~~p~ela~~Il~~a~~~~~~~~~DD~Tvlvirv 763 (764)
T TIGR02865 730 TNDPEEIAEYLLEKAKELRSGKIKDDMTVIVAKV 763 (764)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEEEe
Confidence 4689999999999998653 489999999986
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.53 E-value=1.7e-12 Score=117.56 Aligned_cols=177 Identities=22% Similarity=0.216 Sum_probs=121.4
Q ss_pred CCeEEEEEeCCCChhHHHHHHHHHHHHHHhccCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCceEEEE
Q 015745 128 PNAFYGVFDGHGGPEAAAYIRKNVMRFLFEDVSFPQSSEEDDVFLEGVESSLRKAYLMADQALADDCSVSSSSGTTALTA 207 (401)
Q Consensus 128 ~~~l~aV~DG~GG~~~g~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~a~~~l~~~~~~~~~~GTT~~~~ 207 (401)
+..+++|+|++|..-.|.+.+..+...+........ . ..+.+..+|+.+...... ....+|++++
T Consensus 3 ~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~----------~----p~~~l~~ln~~l~~~~~~-~~~~~t~~~~ 67 (193)
T PF07228_consen 3 GRYFIIVGDVSGHGVSAALLSAALASAIRELLDEGL----------D----PEELLEALNRRLYRDLKG-DNRYATACYA 67 (193)
T ss_dssp TEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTT----------S----HHHHHHHHHHHHHHHTTT-TSTTEEEEEE
T ss_pred CEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCC----------C----HHHHHHHHHHHHHHHhhh-ccccceEEEE
Confidence 446899999999777777777777777765432221 1 556666777777544322 2477888888
Q ss_pred EEE--cCeEEEEEcCccceEEeec--CeeeecCCCCCCCCHHHHHHHHHcCCeeccceecCccccccccCCCCccCCCCC
Q 015745 208 MIF--GRFLMVANAGDCRAVLCRK--GEAIDLSQDHRPIYPSERRRVEELGGYVDDGYLNGVLSVSRALGDWDMKLPRGS 283 (401)
Q Consensus 208 ~i~--~~~l~vanvGDSRayl~r~--g~~~~LT~DH~p~~~~E~~ri~~~Gg~v~~~~~~g~l~ltralGd~~~k~~~~~ 283 (401)
.+. .+.++++|+|+++++++++ +....+.... -.+|...
T Consensus 68 ~~d~~~~~l~~~~aG~~~~l~~~~~~~~~~~~~~~~------------------------------~~lG~~~------- 110 (193)
T PF07228_consen 68 IIDPETGTLTYANAGHPPPLLLRPGGREIEQLESEG------------------------------PPLGIFE------- 110 (193)
T ss_dssp EEETTTTEEEEEEESSSEEEEEETTCTEEEEETCSS------------------------------BBCSSSC-------
T ss_pred EecccceEEEEeCCCCCCEEEEeccccceeecccCc------------------------------cceeeec-------
Confidence 876 5689999999999999999 3343443322 1256544
Q ss_pred CCCceeeeEEEEEEecCCCeEEEEEcCcccccCCHH-------HHHHHHHHHhcCCCCHHHHHHHHHHHHHhC---CCCC
Q 015745 284 SSPLIAEPEFQQMVLTEGDEFLIIGCDGIWDVMSSQ-------HAVSLVLRGLRRHDDPEQCARDLVMEALRL---NTFD 353 (401)
Q Consensus 284 ~~~v~~~pdi~~~~L~~gD~fLVL~SDGlwd~l~~~-------ei~~il~~~l~~~~~~~~~a~~Lv~~A~~~---g~~D 353 (401)
...+....+++.+||. |+|+||||+|....+ .+.+++.+. ...+++++++.|++.+... ...|
T Consensus 111 ----~~~~~~~~~~l~~gd~-l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~~~~~~~~~D 183 (193)
T PF07228_consen 111 ----DIDYQEQEIQLEPGDR-LLLYTDGLFEALNEDGEFFGEERLLELLDEN--RGLSPQEIIDALLEAIDRFGKGPLRD 183 (193)
T ss_dssp ----TTCEEEEEEE--TTEE-EEEECHHHCTTTCHHCHHCCCHHHHHHHHCH--TTS-HHHHHHHHHHHHHHHTTSSTSS
T ss_pred ----cccccceEEEeccccE-EEEeCCChhhccCCccchhHHHHHHHHHhhc--cCCCHHHHHHHHHHHHHHhcCCCCCC
Confidence 2456677899999996 559999999998544 334555432 4567999999999998873 4799
Q ss_pred ceeEEEEEec
Q 015745 354 NLTVIIVCFT 363 (401)
Q Consensus 354 NiTvIvv~l~ 363 (401)
|+|+++++++
T Consensus 184 D~tvl~~~~~ 193 (193)
T PF07228_consen 184 DITVLVIRRQ 193 (193)
T ss_dssp -EEEEEEEE-
T ss_pred ceEEEEEEEC
Confidence 9999999874
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.40 E-value=3e-05 Score=77.74 Aligned_cols=176 Identities=16% Similarity=0.122 Sum_probs=116.9
Q ss_pred CCeEEEEEeCCC-ChhHHHHHHHHHHHHHHhccCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCceEEE
Q 015745 128 PNAFYGVFDGHG-GPEAAAYIRKNVMRFLFEDVSFPQSSEEDDVFLEGVESSLRKAYLMADQALADDCSVSSSSGTTALT 206 (401)
Q Consensus 128 ~~~l~aV~DG~G-G~~~g~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~a~~~l~~~~~~~~~~GTT~~~ 206 (401)
....++|.|.+| |-.++-. +.+....+........ -...+.++..|+.+...... .+=+|+..
T Consensus 174 ~~~~i~I~DvsG~Gv~aal~-m~~~~~~~~~~~~~~~-------------~~p~~~l~~~n~~~~~~~~~--~~f~T~~~ 237 (367)
T COG2208 174 KRLRIGIGDVSGKGVPAALL-MLMPKLALRLLLESGP-------------LDPADVLETLNRVLKQNLEE--DMFVTLFL 237 (367)
T ss_pred cEEEEEEEeccCCCHHHHHH-HHHHHHHHHHhhhccc-------------CCHHHHHHHHHHHHHhcccC--CcEEEEEE
Confidence 345789999999 5555444 3333322222111100 01234555566666554322 26778887
Q ss_pred EEEE--cCeEEEEEcCccceEEeecCee---eecCCCCCCCCHHHHHHHHHcCCeeccceecCccccccccCCCCccCCC
Q 015745 207 AMIF--GRFLMVANAGDCRAVLCRKGEA---IDLSQDHRPIYPSERRRVEELGGYVDDGYLNGVLSVSRALGDWDMKLPR 281 (401)
Q Consensus 207 ~~i~--~~~l~vanvGDSRayl~r~g~~---~~LT~DH~p~~~~E~~ri~~~Gg~v~~~~~~g~l~ltralGd~~~k~~~ 281 (401)
++++ .+.+.++|+|---.++++.++. ..++ .....+|...
T Consensus 238 ~~~d~~~~~l~y~~aGH~p~~i~~~~~~~~~~~l~------------------------------~~g~piG~~~----- 282 (367)
T COG2208 238 GVYDLDSGELTYSNAGHEPALILSADGEIEVEDLT------------------------------ALGLPIGLLP----- 282 (367)
T ss_pred EEEeccCCEEEEeeCCCCCeeEEEcCCCceeEEcc------------------------------CCCceeeecC-----
Confidence 7776 6799999999999999888543 2222 1345677665
Q ss_pred CCCCCceeeeEEEEEEecCCCeEEEEEcCcccc-------cCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhC----C
Q 015745 282 GSSSPLIAEPEFQQMVLTEGDEFLIIGCDGIWD-------VMSSQHAVSLVLRGLRRHDDPEQCARDLVMEALRL----N 350 (401)
Q Consensus 282 ~~~~~v~~~pdi~~~~L~~gD~fLVL~SDGlwd-------~l~~~ei~~il~~~l~~~~~~~~~a~~Lv~~A~~~----g 350 (401)
...+.+....+.+|| .|||.|||+.+ .+..+....++.+ ....+++++++.+.+..... .
T Consensus 283 ------~~~~~~~~~~l~~gd-~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~--~~~~~~~e~~~~i~~~l~~~~~~~~ 353 (367)
T COG2208 283 ------DYQYEVASLQLEPGD-LLVLYTDGVTEARNSDGEFFGLERLLKILGR--LLGQPAEEILEAILESLEELQGDQI 353 (367)
T ss_pred ------CccchheeEEecCCC-EEEEEcCCeeeeecCCccEecHHHHHHHHHH--HhCCCHHHHHHHHHHHHHHhhCCcc
Confidence 456778888999999 56699999998 5667777777765 34568888888887776653 3
Q ss_pred CCCceeEEEEEec
Q 015745 351 TFDNLTVIIVCFT 363 (401)
Q Consensus 351 ~~DNiTvIvv~l~ 363 (401)
-.|++|++++++.
T Consensus 354 ~~DDiTll~lk~~ 366 (367)
T COG2208 354 QDDDITLLVLKVK 366 (367)
T ss_pred ccCceEEEEEEec
Confidence 4788999999975
No 20
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=38.90 E-value=19 Score=27.31 Aligned_cols=18 Identities=17% Similarity=0.508 Sum_probs=14.1
Q ss_pred CCCeEEEEEcCcccccCCH
Q 015745 300 EGDEFLIIGCDGIWDVMSS 318 (401)
Q Consensus 300 ~gD~fLVL~SDGlwd~l~~ 318 (401)
.|.+|| +++||+|=.+..
T Consensus 26 ~G~Rll-va~nGv~lEv~r 43 (72)
T PF09436_consen 26 PGHRLL-VASNGVFLEVRR 43 (72)
T ss_pred CCcEEE-EecCcEEEEEec
Confidence 688877 999999965543
No 21
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=33.01 E-value=90 Score=28.22 Aligned_cols=49 Identities=27% Similarity=0.390 Sum_probs=36.0
Q ss_pred CCeEEEEEcCccc-----------ccCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhCC
Q 015745 301 GDEFLIIGCDGIW-----------DVMSSQHAVSLVLRGLRRHDDPEQCARDLVMEALRLN 350 (401)
Q Consensus 301 gD~fLVL~SDGlw-----------d~l~~~ei~~il~~~l~~~~~~~~~a~~Lv~~A~~~g 350 (401)
+|.+| ..|.|+| |+|.++..=+.+.....+..-|++.|+.|++.-.+||
T Consensus 71 DDTvL-FsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RG 130 (237)
T COG3700 71 DDTVL-FSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRG 130 (237)
T ss_pred CCeeE-ecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcC
Confidence 46555 7888887 5666676666665555555678999999999887776
No 22
>PRK15322 invasion protein OrgB; Provisional
Probab=29.71 E-value=1.9e+02 Score=26.62 Aligned_cols=52 Identities=17% Similarity=0.297 Sum_probs=41.0
Q ss_pred EEecCCCeEEEEEcCcccccCCHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHHh
Q 015745 296 MVLTEGDEFLIIGCDGIWDVMSSQHAVSLVLRGLRRHDD-PEQCARDLVMEALR 348 (401)
Q Consensus 296 ~~L~~gD~fLVL~SDGlwd~l~~~ei~~il~~~l~~~~~-~~~~a~~Lv~~A~~ 348 (401)
+...++.+|+ +|||---=.|++++.++...+.+....+ ....|+.|-+.++.
T Consensus 142 i~yhd~~rFV-~~~g~qIaEFsPq~~v~~a~~~l~~~~d~~~~~~r~ls~~~l~ 194 (210)
T PRK15322 142 LKYHQEQRFI-MSCGDQIAEFSPEQFVETAVGVIKHHLDELPQDCRTISDNAIN 194 (210)
T ss_pred EEEcCCCceE-EEeCCchhccCHHHHHHHHHHHHHhCccchHHHHHHHhHHHHH
Confidence 4555677788 8999988899999999888887766665 77888888777664
No 23
>COG2168 DsrH Uncharacterized conserved protein involved in oxidation of intracellular sulfur [Inorganic ion transport and metabolism]
Probab=26.93 E-value=50 Score=26.48 Aligned_cols=53 Identities=21% Similarity=0.311 Sum_probs=32.9
Q ss_pred EecCCCeEEEEEcCcccccCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhCCCCCceeE
Q 015745 297 VLTEGDEFLIIGCDGIWDVMSSQHAVSLVLRGLRRHDDPEQCARDLVMEALRLNTFDNLTV 357 (401)
Q Consensus 297 ~L~~gD~fLVL~SDGlwd~l~~~ei~~il~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTv 357 (401)
-+.++|.++ |+.||++=.+...+...-++. .| ..+-.|.+.-..||-.++++-
T Consensus 21 ~l~~~D~vl-L~qdGV~aAl~~~~~~~sl~~------~p-~~~~alkeDl~ARGl~~~~s~ 73 (96)
T COG2168 21 LLTEGDAVL-LLQDGVYAALKGNRYLASLRE------SP-IKVYALKEDLLARGLTGQISR 73 (96)
T ss_pred HhcccCeEE-EEcccchhhhcCcHHHHHHhc------Cc-cceeeehhhHHhccchhhcCc
Confidence 457889776 999999998888776666532 22 223334444555665554443
No 24
>COG1539 FolB Dihydroneopterin aldolase [Coenzyme metabolism]
Probab=24.92 E-value=3.7e+02 Score=22.41 Aligned_cols=62 Identities=15% Similarity=0.078 Sum_probs=47.1
Q ss_pred EEcCcccccCCHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHhCCCCCceeEEEEEecCCCCCCC
Q 015745 307 IGCDGIWDVMSSQHAVSLVLRGLRRH--DDPEQCARDLVMEALRLNTFDNLTVIIVCFTSLDHREP 370 (401)
Q Consensus 307 L~SDGlwd~l~~~ei~~il~~~l~~~--~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~~~~~ 370 (401)
-.||=+-|.+.-.++.+.+.+.+... .-++..|+++.+..+.+- ..++.+=|.+.++..+.+
T Consensus 43 ~~~Ddl~dtl~Y~~v~~~i~~~v~~~~~~LiE~lA~~ia~~l~~~~--~~v~~~~v~v~KP~ap~~ 106 (121)
T COG1539 43 AESDDLADTLNYAEVSELIKEIVEGKRFALIETLAEEIADLLLARF--PRVELVEVKVTKPKAPIP 106 (121)
T ss_pred cCccchhheecHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHhhC--CccEEEEEEEECCCCCCC
Confidence 46888999999999999998876543 245777888888777754 778888888887665443
No 25
>PRK10693 response regulator of RpoS; Provisional
Probab=20.90 E-value=7.5e+02 Score=23.71 Aligned_cols=51 Identities=12% Similarity=0.036 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCceEEEEEEE--cCeEEEEEcCccceEEeecCee
Q 015745 179 LRKAYLMADQALADDCSVSSSSGTTALTAMIF--GRFLMVANAGDCRAVLCRKGEA 232 (401)
Q Consensus 179 l~~a~~~a~~~l~~~~~~~~~~GTT~~~~~i~--~~~l~vanvGDSRayl~r~g~~ 232 (401)
..+.+..+|+.+.+.... . .-|+..++++ .+.+.++|.|-...++..++..
T Consensus 207 p~~~l~~lN~~l~~~~~~-~--~~t~~~~~~d~~~~~l~~~~AGhp~~~~~~~~~~ 259 (303)
T PRK10693 207 LGALLKQVNHLLRQANLP-G--QFPLLVGYYHRELKNLILVSAGLNATLNTGEHQV 259 (303)
T ss_pred HHHHHHHHHHHHHhcCCC-c--eeeEEEEEEEcCCCeEEEEeCCCCCEEecCCeEE
Confidence 355666777777664211 1 2577777776 4689999999999885433433
No 26
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=20.30 E-value=5.7e+02 Score=22.16 Aligned_cols=67 Identities=18% Similarity=0.075 Sum_probs=41.2
Q ss_pred EEecCCCeEEEEEcCcccccCCHHHHH----HHHHHHhcCCCCHHHHHHHHHHHHHhC-CCCCceeEEEEEec
Q 015745 296 MVLTEGDEFLIIGCDGIWDVMSSQHAV----SLVLRGLRRHDDPEQCARDLVMEALRL-NTFDNLTVIIVCFT 363 (401)
Q Consensus 296 ~~L~~gD~fLVL~SDGlwd~l~~~ei~----~il~~~l~~~~~~~~~a~~Lv~~A~~~-g~~DNiTvIvv~l~ 363 (401)
+.+.++ .++++..||.-.-.....+. ..+........++.++.+.+-+..... ....-+|++++.++
T Consensus 24 ~~~~~~-~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~~~~~~~l~~~n~~l~~~~~~~~~~T~~~~~id 95 (193)
T smart00331 24 VKLPEG-RLLIAIADVMGKGLAAALAMSMARSALRTLLSEGISLSQILERLNRAIYENGEDGMFATLFLALYD 95 (193)
T ss_pred EEeCCC-eEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhcCCCCcEEEEEEEEEE
Confidence 334443 46668889998766655444 334433344456888877776655554 34456788777764
Done!