BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015746
(401 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224066507|ref|XP_002302114.1| predicted protein [Populus trichocarpa]
gi|222843840|gb|EEE81387.1| predicted protein [Populus trichocarpa]
Length = 404
Score = 639 bits (1648), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/350 (87%), Positives = 322/350 (92%)
Query: 50 FLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT 109
F A P SRR S+FTVKASAAEKKKVLIVNTNSGGHAVIGFY AKELLGSGHEVTI+T
Sbjct: 53 FAAQPICSRRLFTSSFTVKASAAEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILT 112
Query: 110 VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRP 169
VG+E+SDKMKKPPF+RF+EIVSAGGKTVWG+PAEVG VV G FDVVLDNNGK+LDAVRP
Sbjct: 113 VGEESSDKMKKPPFSRFSEIVSAGGKTVWGNPAEVGKVVEGAAFDVVLDNNGKDLDAVRP 172
Query: 170 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFR 229
V DWAKS+GVKQFLFISSAGIYK DEPPHVEGDVVK DAGHV VEKYI+E FS+WA FR
Sbjct: 173 VVDWAKSAGVKQFLFISSAGIYKATDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAIFR 232
Query: 230 PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ TNIAH RDLSSMLTLAVENPEAAS
Sbjct: 233 PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNIAHARDLSSMLTLAVENPEAAS 292
Query: 290 SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRA 349
IFN VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK GIDAKKAFPFRNMHFYAEPRA
Sbjct: 293 GRIFNCVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKVVGIDAKKAFPFRNMHFYAEPRA 352
Query: 350 AKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 399
AK+ILGW+ TTNLPEDLKERF++YVKIGRDKK MQFEIDDKILESLKVP+
Sbjct: 353 AKEILGWQGTTNLPEDLKERFDDYVKIGRDKKPMQFEIDDKILESLKVPV 402
>gi|224082634|ref|XP_002306773.1| predicted protein [Populus trichocarpa]
gi|222856222|gb|EEE93769.1| predicted protein [Populus trichocarpa]
Length = 377
Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/348 (87%), Positives = 322/348 (92%)
Query: 52 ACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG 111
A P SRR S+F VKASAAEKKK+LIVNTNSGGHAVIGFY AKELLGSGHEV+I+TVG
Sbjct: 28 AYPTCSRRLFASSFPVKASAAEKKKILIVNTNSGGHAVIGFYFAKELLGSGHEVSILTVG 87
Query: 112 DENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVA 171
+E+SDKMKKPPF+RF+EIV AGGKTVWG+PAEVG V G TFDVVLDNNGK+LD VRPV
Sbjct: 88 EESSDKMKKPPFSRFSEIVGAGGKTVWGNPAEVGKAVEGATFDVVLDNNGKDLDTVRPVV 147
Query: 172 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQ 231
DWAKS+GVKQFLFISSAGIYKP DEPPHVEGDVVK DAGHV VEKYI+E FS+WA FRPQ
Sbjct: 148 DWAKSAGVKQFLFISSAGIYKPTDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAIFRPQ 207
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ TNIAHVRDLSSMLTLAVENPEAAS N
Sbjct: 208 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNIAHVRDLSSMLTLAVENPEAASGN 267
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAK 351
IFN VSDRAVTLDGMAKLCAQAAGLPVEI+HYDPKA GIDAKKAFPFRNMHFYAEPRAAK
Sbjct: 268 IFNCVSDRAVTLDGMAKLCAQAAGLPVEIMHYDPKAVGIDAKKAFPFRNMHFYAEPRAAK 327
Query: 352 DILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 399
DILGW+ TTNLPEDLKERF+EYVKIGRDKK MQFEIDDKILESLKVP+
Sbjct: 328 DILGWQGTTNLPEDLKERFDEYVKIGRDKKPMQFEIDDKILESLKVPV 375
>gi|225436924|ref|XP_002275066.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic [Vitis
vinifera]
gi|147789789|emb|CAN73874.1| hypothetical protein VITISV_039540 [Vitis vinifera]
Length = 397
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 295/348 (84%), Positives = 310/348 (89%), Gaps = 3/348 (0%)
Query: 54 PASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE 113
P S++R S S VKA +KKKVLIVNTNSGGHAVIGFY AK+LLGSGHEVTIMTVG+E
Sbjct: 53 PTSTKRLSFSTLNVKA---QKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTIMTVGEE 109
Query: 114 NSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADW 173
NSDKMKKPPF+RF+EI SAGGKTVWGDPAEVG VV G FDVVLDNNGK++D VRPV DW
Sbjct: 110 NSDKMKKPPFSRFSEITSAGGKTVWGDPAEVGKVVAGAAFDVVLDNNGKDIDTVRPVVDW 169
Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYM 233
AKSSGV+QFLFISSAGIYKP DEPPHVEGD+VK DAGHV VE YISE F +WA FRPQYM
Sbjct: 170 AKSSGVEQFLFISSAGIYKPTDEPPHVEGDIVKADAGHVGVETYISEVFGSWAIFRPQYM 229
Query: 234 IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
IGSGNNKDCEEWFFDRIVR RPVPIPGSGMQ TNIAHVRDLSSMLTLAVENP AAS NIF
Sbjct: 230 IGSGNNKDCEEWFFDRIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVENPAAASGNIF 289
Query: 294 NLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI 353
N VSDRAVTLDGMAKLCAQAAG PV IVHYDPKA GIDAKKAFPFRNMHFYAEPRAAKDI
Sbjct: 290 NCVSDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHFYAEPRAAKDI 349
Query: 354 LGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIPV 401
LGW TNLPEDLKERF+EYVKIGRDKK M+FEIDDKILESLKV + V
Sbjct: 350 LGWHGITNLPEDLKERFDEYVKIGRDKKPMKFEIDDKILESLKVSVAV 397
>gi|32746733|gb|AAP87140.1| mRNA-binding protein precursor, partial [Nicotiana tabacum]
Length = 405
Score = 606 bits (1562), Expect = e-171, Method: Compositional matrix adjust.
Identities = 285/344 (82%), Positives = 311/344 (90%)
Query: 56 SSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS 115
S R S+ FTV+ASAAEKKKVLIVNTNSGGHAVIGFY AKELLGSGH+VTI+TVG+E+S
Sbjct: 60 SRRFSTFQYFTVQASAAEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHDVTILTVGEESS 119
Query: 116 DKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAK 175
DKMKK PFNRF+EI AGG+T+WGDPA+VG ++ G FD VLDNNGK+LDAVRPVADWAK
Sbjct: 120 DKMKKTPFNRFSEITGAGGRTIWGDPADVGKILEGEVFDAVLDNNGKDLDAVRPVADWAK 179
Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIG 235
SSG KQFLFISSAGIYK DEPPHVEGD VK DAGHV VEKYISE F +WASFRPQYMIG
Sbjct: 180 SSGAKQFLFISSAGIYKSTDEPPHVEGDAVKADAGHVGVEKYISEIFDSWASFRPQYMIG 239
Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
SGNNKDCEEWFFDRIVR RPVPIPGSGMQ TNIAHVRDLSSMLT AV+NP AAS +IFN
Sbjct: 240 SGNNKDCEEWFFDRIVRGRPVPIPGSGMQLTNIAHVRDLSSMLTAAVQNPAAASGHIFNC 299
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILG 355
VSDRAVTLDGMAKLCA+AAG VEIVHYDPKA G+DAKKAFPFRNMHFY+EPRAAK+ILG
Sbjct: 300 VSDRAVTLDGMAKLCAKAAGFSVEIVHYDPKAVGVDAKKAFPFRNMHFYSEPRAAKEILG 359
Query: 356 WRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 399
W +TTNLPEDLKERF+EYVKIGRDKK M+FE+DDKILE+LKVP+
Sbjct: 360 WSATTNLPEDLKERFDEYVKIGRDKKEMKFELDDKILEALKVPV 403
>gi|343172519|gb|AEL98963.1| chloroplast stem-loop binding protein, partial [Silene latifolia]
Length = 384
Score = 606 bits (1562), Expect = e-171, Method: Compositional matrix adjust.
Identities = 287/355 (80%), Positives = 320/355 (90%), Gaps = 1/355 (0%)
Query: 45 ISPSSFLACPASSRRSSV-SAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH 103
I P + L PA R S+V S+F++ AS KKKVLIVNT+SGGHAVIGFY AKELLGSGH
Sbjct: 28 IHPETTLFFPALCRNSNVGSSFSINASTGSKKKVLIVNTSSGGHAVIGFYFAKELLGSGH 87
Query: 104 EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKN 163
+VT+ TVGDE+SDKMKKPPFNRF+EI SAGGKTVWG+PAEVG VVG +FDVVLDNNGK+
Sbjct: 88 QVTVFTVGDESSDKMKKPPFNRFSEITSAGGKTVWGNPAEVGKVVGEESFDVVLDNNGKD 147
Query: 164 LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS 223
L+ VRPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGDVVK DA HV VE+YIS+ FS
Sbjct: 148 LETVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDVVKADASHVAVEEYISQTFS 207
Query: 224 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
+WASFRPQYMIGSGNNKDCEEWFFDRIVR RP+PIPGSGMQ TNI+HV+DLSSMLTLAVE
Sbjct: 208 SWASFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNISHVKDLSSMLTLAVE 267
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 343
NP +AS NIFN VSDRAVTLDGMAKLCAQAAGLPV+IVHYDPKA GIDAKKAFPFRNMHF
Sbjct: 268 NPASASGNIFNCVSDRAVTLDGMAKLCAQAAGLPVKIVHYDPKAIGIDAKKAFPFRNMHF 327
Query: 344 YAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVP 398
YAEPRAAK+ILGW+++T LP+DLKER+EEYVKIGRDKK ++FE+DDKILE+LK P
Sbjct: 328 YAEPRAAKEILGWKASTYLPDDLKERYEEYVKIGRDKKDIKFELDDKILEALKAP 382
>gi|343172517|gb|AEL98962.1| chloroplast stem-loop binding protein, partial [Silene latifolia]
Length = 384
Score = 606 bits (1562), Expect = e-171, Method: Compositional matrix adjust.
Identities = 287/355 (80%), Positives = 319/355 (89%), Gaps = 1/355 (0%)
Query: 45 ISPSSFLACPASSRRSSV-SAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH 103
I P + L PA R S+V S+F++ AS KKKVLIVNTNSGGHAVIGFY AKELL SGH
Sbjct: 28 IHPETTLFFPALCRNSNVGSSFSINASTGSKKKVLIVNTNSGGHAVIGFYFAKELLASGH 87
Query: 104 EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKN 163
+VT+ TVGDE+SDKMKKPPFNRF+EI SAGGKTVWG+PAEVG VVG +FDVVLDNNGK+
Sbjct: 88 QVTVFTVGDESSDKMKKPPFNRFSEITSAGGKTVWGNPAEVGKVVGEESFDVVLDNNGKD 147
Query: 164 LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS 223
L+ VRPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGDVVK DA HV VE+YIS+ FS
Sbjct: 148 LETVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDVVKADASHVAVEEYISQTFS 207
Query: 224 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
+WASFRPQYMIGSGNNKDCEEWFFDRIVR RP+PIPGSGMQ TNI+HV+DLSSMLTLAVE
Sbjct: 208 SWASFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNISHVKDLSSMLTLAVE 267
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 343
NP +AS NIFN VSDRAVTLDGMAKLCAQAAGLPV+IVHYDPKA GIDAKKAFPFRNMHF
Sbjct: 268 NPASASGNIFNCVSDRAVTLDGMAKLCAQAAGLPVKIVHYDPKAIGIDAKKAFPFRNMHF 327
Query: 344 YAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVP 398
YAEPRAAK+ILGW+++T LP+DLKER+EEYVKIGRDKK ++FE+DDKILE+LK P
Sbjct: 328 YAEPRAAKEILGWKASTYLPDDLKERYEEYVKIGRDKKDIKFELDDKILEALKAP 382
>gi|449444637|ref|XP_004140080.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Cucumis sativus]
Length = 409
Score = 602 bits (1553), Expect = e-170, Method: Compositional matrix adjust.
Identities = 284/342 (83%), Positives = 311/342 (90%)
Query: 58 RRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK 117
R S+V +F+V+AS++ KKKVLIVNTNSGGHAVIGFY AK+LLGSGHEVTI+TVG+++SDK
Sbjct: 66 RPSTVFSFSVRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDK 125
Query: 118 MKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS 177
M KPPFNRF+EIVS GGKTVWGDPAE+G VV G +FDVVLDNNGK++D VRPV DWAKSS
Sbjct: 126 MNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDTVRPVIDWAKSS 185
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSG 237
GVKQFLFISSAGIYK DEPPHVEGD VK DAGHV VEKYI+E FS+WA FRPQYMIGSG
Sbjct: 186 GVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAVFRPQYMIGSG 245
Query: 238 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
NNKDCEEWFFDRIVR RP+PIPGSGMQ TNIAHVRDLSSMLTLAVE P+ A SNIFN VS
Sbjct: 246 NNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVS 305
Query: 298 DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWR 357
RAVTLDGMAKLCAQAAG PV IVHYDPKA G+DAKKAFPFRNMHFYAEPRAA++ILGW
Sbjct: 306 GRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWE 365
Query: 358 STTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 399
TTNLPEDLKERFEEYVKIGRDKKA++FE+DDKILESL VP+
Sbjct: 366 GTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLNVPV 407
>gi|356500206|ref|XP_003518924.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic-like
[Glycine max]
Length = 403
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 311/403 (77%), Positives = 349/403 (86%), Gaps = 2/403 (0%)
Query: 1 MATLASSSSSLLLSSPPSKLAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPAS--SR 58
MAT+ASSSS++L S+ S L S P + RLSFSS H SS SFL+ +S +
Sbjct: 1 MATIASSSSTVLFSASSSNLLPFSHPSTSRLSFSSSLHSSSFSLSISPSFLSYYSSSSTH 60
Query: 59 RSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM 118
++ +AF++ ASAAEKKKVLIVNTNSGGHA+IGFY AKELLG+GH VTI+TVG+E SDKM
Sbjct: 61 FATHAAFSISASAAEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGEEGSDKM 120
Query: 119 KKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG 178
KKPPFNRF+EIVSAGG+TVWG+PAEVG+VVGG FDVVLDNNGK+L+ VRPV DWAKSSG
Sbjct: 121 KKPPFNRFSEIVSAGGRTVWGNPAEVGSVVGGEVFDVVLDNNGKDLETVRPVIDWAKSSG 180
Query: 179 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGN 238
VKQFLF+SSAGIYKP DEPPHVEGDVVK DAGHV+VEKYI E F +WA FRPQYMIGSGN
Sbjct: 181 VKQFLFVSSAGIYKPTDEPPHVEGDVVKADAGHVEVEKYIEETFGSWAVFRPQYMIGSGN 240
Query: 239 NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
NKDCEEWFFDRIVR RPVPIPGSG+Q +NIAHVRDLSSMLTLAVENPEAA+ IFN VSD
Sbjct: 241 NKDCEEWFFDRIVRDRPVPIPGSGLQLSNIAHVRDLSSMLTLAVENPEAANQTIFNCVSD 300
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS 358
RAVTLDG+AKLCAQAAG PV I+HYDPKA G+DAKKAFPFR HFYAEPRAAK LGW+S
Sbjct: 301 RAVTLDGIAKLCAQAAGRPVNILHYDPKAVGVDAKKAFPFRTYHFYAEPRAAKAKLGWQS 360
Query: 359 TTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIPV 401
TTNLPEDLKERFEEYVKIGRDKK++QFE+DDKILE+LKVP+ V
Sbjct: 361 TTNLPEDLKERFEEYVKIGRDKKSIQFELDDKILEALKVPVTV 403
>gi|357440743|ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula]
gi|355479697|gb|AES60900.1| MRNA-binding protein [Medicago truncatula]
Length = 401
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 300/403 (74%), Positives = 338/403 (83%), Gaps = 4/403 (0%)
Query: 1 MATLASSSSSLLLSSPPSKLAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPA--SSR 58
MA LASSS +LL +S S L L S L S S L S S+FL+ P+ S R
Sbjct: 1 MAMLASSSPTLLFTSTSSNLLP--LSHSCTLRLSFSSSLQSTSLSISSTFLSHPSLTSKR 58
Query: 59 RSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM 118
++ + ++ ASAAEKKKVLI+NTNSGGHAVIGFY AKELLG+GH VTI+TVGDE+SDKM
Sbjct: 59 LANHATLSISASAAEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVTILTVGDESSDKM 118
Query: 119 KKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG 178
KKPPFNRF+EIVSAGG TVWG+PA+VG+VVGG FDVVLDNNGK+L++VRPV DWAKS+G
Sbjct: 119 KKPPFNRFSEIVSAGGSTVWGNPADVGSVVGGEAFDVVLDNNGKDLESVRPVIDWAKSAG 178
Query: 179 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGN 238
KQFLFISSAGIYK DEPPHVEGD VK DAGHV VEKYI E F +WA FRPQYM GSGN
Sbjct: 179 AKQFLFISSAGIYKTTDEPPHVEGDAVKADAGHVGVEKYIEETFDSWAVFRPQYMTGSGN 238
Query: 239 NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
NKDCEEWFFDRIVR RPV IPGSG+Q TNI+HV+DLSSMLTLAVENP+AA+ +IFN VSD
Sbjct: 239 NKDCEEWFFDRIVRDRPVLIPGSGLQLTNISHVKDLSSMLTLAVENPDAANHSIFNCVSD 298
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS 358
RAVTL+G+AKLCAQAAG PV IVHYDPKA GIDAKKAFPFRN+HFYAEPRAAK LGW S
Sbjct: 299 RAVTLNGIAKLCAQAAGRPVNIVHYDPKAIGIDAKKAFPFRNVHFYAEPRAAKTKLGWSS 358
Query: 359 TTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIPV 401
TTNLPEDLKERFEEY+KIGRDKK ++FE+DDKILE+LKVP+ V
Sbjct: 359 TTNLPEDLKERFEEYIKIGRDKKPIKFELDDKILEALKVPVSV 401
>gi|297821230|ref|XP_002878498.1| hypothetical protein ARALYDRAFT_486816 [Arabidopsis lyrata subsp.
lyrata]
gi|297324336|gb|EFH54757.1| hypothetical protein ARALYDRAFT_486816 [Arabidopsis lyrata subsp.
lyrata]
Length = 408
Score = 599 bits (1544), Expect = e-169, Method: Compositional matrix adjust.
Identities = 284/345 (82%), Positives = 308/345 (89%), Gaps = 1/345 (0%)
Query: 56 SSRRSSVSAFTVKASA-AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN 114
+SRR S FTVKAS+ +KK VLIVNTNSGGHAVIGFY AKELL +GH VTIMTVGDE+
Sbjct: 62 TSRRLSPQGFTVKASSVGDKKNVLIVNTNSGGHAVIGFYFAKELLSAGHGVTIMTVGDES 121
Query: 115 SDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWA 174
SDKMKKPPFNRF+EI+S GGKTVWG+PA+V NVVGG TFDVVLDNNGK+LD VRPV DWA
Sbjct: 122 SDKMKKPPFNRFSEIISGGGKTVWGNPADVANVVGGETFDVVLDNNGKDLDTVRPVVDWA 181
Query: 175 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI 234
KSSGVKQFLFISSAGIYK ++PPHVEGD VK DAGHV VEKY++E F NWASFRPQYMI
Sbjct: 182 KSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGHVAVEKYLAETFGNWASFRPQYMI 241
Query: 235 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
GSGNNKDCEEWFFDRIVR R VPIPGSG+Q TNI+HVRDLSSMLT AV NP+AAS NIFN
Sbjct: 242 GSGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVTNPKAASGNIFN 301
Query: 295 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 354
VSDRAVTLDGMAKLCA AAG VEIVHYDPKA G+DAKKAFPFRNMHFYAEPRAAK+IL
Sbjct: 302 CVSDRAVTLDGMAKLCAAAAGKTVEIVHYDPKAIGVDAKKAFPFRNMHFYAEPRAAKEIL 361
Query: 355 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 399
GW S TNLPEDLKERFEEYVKIGRDKK ++FE+DDKILE+LK P+
Sbjct: 362 GWESKTNLPEDLKERFEEYVKIGRDKKEIKFELDDKILEALKTPV 406
>gi|356535978|ref|XP_003536518.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic-like
[Glycine max]
Length = 404
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 279/329 (84%), Positives = 302/329 (91%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA 132
EKKKVLIVNTNSGGHA+IGFY AKELLG+GH VTI+TVGDE SDKMKKPPFNRF+EIVSA
Sbjct: 76 EKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGDEGSDKMKKPPFNRFSEIVSA 135
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
GG+TVWG+PA+VG+VVGG FDVVLDNNGK+L VRPV DWAKSSGVKQFLFISSAGIYK
Sbjct: 136 GGRTVWGNPAQVGSVVGGEVFDVVLDNNGKDLGTVRPVIDWAKSSGVKQFLFISSAGIYK 195
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
P DEPPHVEGDVVK DAGHV+VEKYI E + +WA FRPQYMIGSGNNKDCEEWFFDRIVR
Sbjct: 196 PTDEPPHVEGDVVKADAGHVEVEKYIEETYGSWAVFRPQYMIGSGNNKDCEEWFFDRIVR 255
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RPVPIPGSG+Q +NIAHVRDLSSMLTLAVENPEAA+ IFN VSDRAVTLDG+AKLCAQ
Sbjct: 256 DRPVPIPGSGLQLSNIAHVRDLSSMLTLAVENPEAANQTIFNCVSDRAVTLDGIAKLCAQ 315
Query: 313 AAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE 372
AAG PV IVHYDPKA G+DAKKAFPFR HFYAEPRAAK LGW+STTNLPEDLKERFEE
Sbjct: 316 AAGRPVNIVHYDPKAVGVDAKKAFPFRTYHFYAEPRAAKAKLGWQSTTNLPEDLKERFEE 375
Query: 373 YVKIGRDKKAMQFEIDDKILESLKVPIPV 401
YVKIGRDKK++QFE+DDKILE+LKVP+ V
Sbjct: 376 YVKIGRDKKSIQFELDDKILEALKVPVSV 404
>gi|255647134|gb|ACU24035.1| unknown [Glycine max]
Length = 403
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 310/403 (76%), Positives = 347/403 (86%), Gaps = 2/403 (0%)
Query: 1 MATLASSSSSLLLSSPPSKLAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPAS--SR 58
MAT+ASSSS++L S+ S L S P + RLSFSS H SS SFL+ +S +
Sbjct: 1 MATIASSSSTVLFSASSSNLLPFSHPSTSRLSFSSSLHSSSFSLSISPSFLSYYSSSSTH 60
Query: 59 RSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM 118
++ +AF++ ASAAEKKKVLIVNTNSGGHA+IGFY AKELLG+GH VTI+TVG+E SDKM
Sbjct: 61 FATHAAFSISASAAEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGEEGSDKM 120
Query: 119 KKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG 178
KKPPFNRF+EIVSAGG+TVWG+PAEVG+VVGG FDVVLDNNGK L+ VRPV DWAKSSG
Sbjct: 121 KKPPFNRFSEIVSAGGRTVWGNPAEVGSVVGGEVFDVVLDNNGKGLETVRPVIDWAKSSG 180
Query: 179 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGN 238
VKQFLF+SSAGIYKP DEPPHVEGDVVK DAGHV+VEKYI E F +WA FRPQYMIGSGN
Sbjct: 181 VKQFLFVSSAGIYKPTDEPPHVEGDVVKADAGHVEVEKYIEETFGSWAVFRPQYMIGSGN 240
Query: 239 NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
NKDCEEWFFDRIVR RPVPIPGSG+Q +NIAHVRDLSSMLTLAV NPEAA+ IFN VSD
Sbjct: 241 NKDCEEWFFDRIVRDRPVPIPGSGLQLSNIAHVRDLSSMLTLAVGNPEAANQTIFNCVSD 300
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS 358
RAVTLDG+AKLCAQAAG PV I+HYDPKA G+DAKKAFPFR HFYAEPRAAK LGW+S
Sbjct: 301 RAVTLDGIAKLCAQAAGRPVNILHYDPKAVGVDAKKAFPFRTYHFYAEPRAAKAKLGWQS 360
Query: 359 TTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIPV 401
TTNLPEDLKERFEEYVKIGRDKK++QFE+DDKILE+LKVP+ V
Sbjct: 361 TTNLPEDLKERFEEYVKIGRDKKSIQFELDDKILEALKVPVTV 403
>gi|15229384|ref|NP_191873.1| chloroplast stem-loop binding protein-41 [Arabidopsis thaliana]
gi|75311698|sp|Q9LYA9.1|CP41A_ARATH RecName: Full=Chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic; Short=CSP41-a; Flags: Precursor
gi|16226201|gb|AAL16101.1|AF428269_1 AT3g63140/T20O10_240 [Arabidopsis thaliana]
gi|7573443|emb|CAB87759.1| mRNA binding protein precursor-like [Arabidopsis thaliana]
gi|16649035|gb|AAL24369.1| mRNA binding protein precursor-like [Arabidopsis thaliana]
gi|22136252|gb|AAM91204.1| mRNA binding protein precursor-like [Arabidopsis thaliana]
gi|332646919|gb|AEE80440.1| chloroplast stem-loop binding protein-41 [Arabidopsis thaliana]
Length = 406
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 284/345 (82%), Positives = 306/345 (88%), Gaps = 1/345 (0%)
Query: 56 SSRRSSVSAFTVKASA-AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN 114
+SRR S FTVKAS+ EKK VLIVNTNSGGHAVIGFY AKELL +GH VTI+TVGDE+
Sbjct: 60 TSRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTVGDES 119
Query: 115 SDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWA 174
S+KMKKPPFNRF+EIVS GGKTVWG+PA V NVVGG TFDVVLDNNGK+LD VRPV DWA
Sbjct: 120 SEKMKKPPFNRFSEIVSGGGKTVWGNPANVANVVGGETFDVVLDNNGKDLDTVRPVVDWA 179
Query: 175 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI 234
KSSGVKQFLFISSAGIYK ++PPHVEGD VK DAGHV VEKY++E F NWASFRPQYMI
Sbjct: 180 KSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGHVVVEKYLAETFGNWASFRPQYMI 239
Query: 235 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
GSGNNKDCEEWFFDRIVR R VPIPGSG+Q TNI+HVRDLSSMLT AV NPEAAS NIFN
Sbjct: 240 GSGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFN 299
Query: 295 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 354
VSDRAVTLDGMAKLCA AAG VEIVHYDPKA G+DAKKAF FRNMHFYAEPRAAKD+L
Sbjct: 300 CVSDRAVTLDGMAKLCAAAAGKTVEIVHYDPKAIGVDAKKAFLFRNMHFYAEPRAAKDLL 359
Query: 355 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 399
GW S TNLPEDLKERFEEYVKIGRDKK ++FE+DDKILE+LK P+
Sbjct: 360 GWESKTNLPEDLKERFEEYVKIGRDKKEIKFELDDKILEALKTPV 404
>gi|357440745|ref|XP_003590650.1| MRNA-binding protein [Medicago truncatula]
gi|355479698|gb|AES60901.1| MRNA-binding protein [Medicago truncatula]
Length = 419
Score = 589 bits (1519), Expect = e-166, Method: Compositional matrix adjust.
Identities = 300/421 (71%), Positives = 338/421 (80%), Gaps = 22/421 (5%)
Query: 1 MATLASSSSSLLLSSPPSKLAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPA--SSR 58
MA LASSS +LL +S S L L S L S S L S S+FL+ P+ S R
Sbjct: 1 MAMLASSSPTLLFTSTSSNLLP--LSHSCTLRLSFSSSLQSTSLSISSTFLSHPSLTSKR 58
Query: 59 RSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM 118
++ + ++ ASAAEKKKVLI+NTNSGGHAVIGFY AKELLG+GH VTI+TVGDE+SDKM
Sbjct: 59 LANHATLSISASAAEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVTILTVGDESSDKM 118
Query: 119 KKPPFNRFN------------------EIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNN 160
KKPPFNRF+ EIVSAGG TVWG+PA+VG+VVGG FDVVLDNN
Sbjct: 119 KKPPFNRFSIIIITSRFNLLLNLKNIQEIVSAGGSTVWGNPADVGSVVGGEAFDVVLDNN 178
Query: 161 GKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 220
GK+L++VRPV DWAKS+G KQFLFISSAGIYK DEPPHVEGD VK DAGHV VEKYI E
Sbjct: 179 GKDLESVRPVIDWAKSAGAKQFLFISSAGIYKTTDEPPHVEGDAVKADAGHVGVEKYIEE 238
Query: 221 NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
F +WA FRPQYM GSGNNKDCEEWFFDRIVR RPV IPGSG+Q TNI+HV+DLSSMLTL
Sbjct: 239 TFDSWAVFRPQYMTGSGNNKDCEEWFFDRIVRDRPVLIPGSGLQLTNISHVKDLSSMLTL 298
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRN 340
AVENP+AA+ +IFN VSDRAVTL+G+AKLCAQAAG PV IVHYDPKA GIDAKKAFPFRN
Sbjct: 299 AVENPDAANHSIFNCVSDRAVTLNGIAKLCAQAAGRPVNIVHYDPKAIGIDAKKAFPFRN 358
Query: 341 MHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIP 400
+HFYAEPRAAK LGW STTNLPEDLKERFEEY+KIGRDKK ++FE+DDKILE+LKVP+
Sbjct: 359 VHFYAEPRAAKTKLGWSSTTNLPEDLKERFEEYIKIGRDKKPIKFELDDKILEALKVPVS 418
Query: 401 V 401
V
Sbjct: 419 V 419
>gi|350534514|ref|NP_001234656.1| mRNA binding protein precursor [Solanum lycopersicum]
gi|26453355|gb|AAD21574.3| mRNA binding protein precursor [Solanum lycopersicum]
Length = 407
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 281/355 (79%), Positives = 312/355 (87%), Gaps = 5/355 (1%)
Query: 50 FLACPASSRRSSVSAFT----VKASAA-EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE 104
F+A +SRR S +++ V+AS A EKKKVLIVNTNSGGHAVIGFY AKELLGSGH+
Sbjct: 51 FVAFSLNSRRVSPKSYSSTSVVQASGAVEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHD 110
Query: 105 VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNL 164
VT++TVG+E+SDKMKK PF RF+EI AGG+TVWG+PA+VG ++ G FD VLDNNGK+L
Sbjct: 111 VTVLTVGEESSDKMKKTPFTRFSEITGAGGRTVWGNPADVGKILEGEVFDAVLDNNGKDL 170
Query: 165 DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN 224
D+V PVADWAKSSGVKQFLFISSAGIYKP DEPPHVEGD VK DAGHV VEKYISE F +
Sbjct: 171 DSVSPVADWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDAVKADAGHVLVEKYISEIFGS 230
Query: 225 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
WASFRPQYMIGSGNNKDCEEWFFDRIVR RPV IPGSGMQ TNI+HVRDLSSMLTLAV+N
Sbjct: 231 WASFRPQYMIGSGNNKDCEEWFFDRIVRGRPVLIPGSGMQLTNISHVRDLSSMLTLAVQN 290
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFY 344
P AAS IFN VSDRAVTLDGMA+LCA+AAG VEIVHYDPKA G+DAKKAFPFRNMHFY
Sbjct: 291 PAAASGRIFNCVSDRAVTLDGMARLCAKAAGSSVEIVHYDPKAVGVDAKKAFPFRNMHFY 350
Query: 345 AEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 399
AEPRA +ILGW +TTNLPEDLKER+EEYVKIGRDKK M+FE+DDKILESLKVP+
Sbjct: 351 AEPRAPNEILGWSATTNLPEDLKERYEEYVKIGRDKKEMKFELDDKILESLKVPV 405
>gi|1532135|gb|AAC49424.1| chloroplast mRNA-binding protein CSP41 precursor, partial [Spinacia
oleracea]
Length = 415
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 262/331 (79%), Positives = 296/331 (89%)
Query: 69 ASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE 128
+++ +KKKVLIVNTNSGGHAVIGFY AKELLGSGH+VT+ TVGDE SDKMKKPPF RF+E
Sbjct: 84 STSTDKKKVLIVNTNSGGHAVIGFYFAKELLGSGHQVTVFTVGDEGSDKMKKPPFTRFSE 143
Query: 129 IVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA 188
I SAGGKTVWG+PA++GNVVGG FDVVLDNNGK+L+ V PV DWAKSSG +QFL+ISSA
Sbjct: 144 ITSAGGKTVWGNPADIGNVVGGEAFDVVLDNNGKDLETVSPVVDWAKSSGAEQFLYISSA 203
Query: 189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
GIY DEPPH+EGD VK A HV VE YI++ F +WA FRPQYMIGSGNNKDCEEWFFD
Sbjct: 204 GIYNSTDEPPHIEGDAVKSSASHVAVEDYIAKTFGSWAVFRPQYMIGSGNNKDCEEWFFD 263
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RIVR RPV IPGSGMQ TNI+HV+DLSSMLT+AVENP AAS NIFN VSDRAVTLDGMAK
Sbjct: 264 RIVRDRPVLIPGSGMQLTNISHVKDLSSMLTVAVENPSAASGNIFNCVSDRAVTLDGMAK 323
Query: 309 LCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 368
LCA+AAGLPV+I+HY+PKA G+DAKKAFPFRNMHFYAEPRAA+DILGW++TT LPEDLKE
Sbjct: 324 LCAKAAGLPVKILHYEPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTYLPEDLKE 383
Query: 369 RFEEYVKIGRDKKAMQFEIDDKILESLKVPI 399
R+EEYVKIGRDKK ++FEIDDKILE+L V +
Sbjct: 384 RYEEYVKIGRDKKDIKFEIDDKILEALNVSV 414
>gi|255559448|ref|XP_002520744.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
gi|223540129|gb|EEF41706.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
Length = 398
Score = 559 bits (1441), Expect = e-157, Method: Compositional matrix adjust.
Identities = 285/329 (86%), Positives = 299/329 (90%), Gaps = 2/329 (0%)
Query: 45 ISPSSFLACPASSRRSSVSAF-TVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH 103
I+P+S LA PA SRR S S+ TVKASAA KKKVLIVNTNSGGHAVIGFY AKELLGSGH
Sbjct: 48 ITPTS-LAYPACSRRFSASSSFTVKASAAAKKKVLIVNTNSGGHAVIGFYFAKELLGSGH 106
Query: 104 EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKN 163
EVTI TVGDENSDKMKKPPF+RF+EIVSAGGKTVWGDPAEVG VV G TFDVVLDNNGK+
Sbjct: 107 EVTIFTVGDENSDKMKKPPFSRFSEIVSAGGKTVWGDPAEVGKVVEGATFDVVLDNNGKD 166
Query: 164 LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS 223
LD VRPVADWAKS+G KQFL+ISSAGIY P DEPPHVEGD VK A HV VEKYI+E FS
Sbjct: 167 LDTVRPVADWAKSAGAKQFLYISSAGIYVPTDEPPHVEGDAVKSSASHVAVEKYIAEVFS 226
Query: 224 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
+WA FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ TNI+HVRDLSSMLT +VE
Sbjct: 227 SWAVFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNISHVRDLSSMLTKSVE 286
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 343
NPEAA NIFN VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA GIDAKKAFPFRNMHF
Sbjct: 287 NPEAAGGNIFNCVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAVGIDAKKAFPFRNMHF 346
Query: 344 YAEPRAAKDILGWRSTTNLPEDLKERFEE 372
YAEPRAAKDILGW+STTNLPEDLKERF+E
Sbjct: 347 YAEPRAAKDILGWQSTTNLPEDLKERFDE 375
>gi|312273915|gb|ADQ57386.1| CSP41A-X protein [Silene latifolia]
Length = 306
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 256/306 (83%), Positives = 282/306 (92%)
Query: 96 KELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDV 155
KELL SGH+VT+ TVGDE+SDKMKKPPFNRF+EI SAGGKTVWG+PAEVG VVG +FDV
Sbjct: 1 KELLASGHQVTVFTVGDESSDKMKKPPFNRFSEITSAGGKTVWGNPAEVGKVVGEESFDV 60
Query: 156 VLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE 215
VLDNNGK+L+ VRPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGDVVK DA HV VE
Sbjct: 61 VLDNNGKDLETVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDVVKADASHVAVE 120
Query: 216 KYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS 275
+YIS+ FS+WASFRPQYMIGSGNNKDCEEWFFDRIVR RP+PIPGSGMQ TNI+HV+DLS
Sbjct: 121 EYISQTFSSWASFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNISHVKDLS 180
Query: 276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
SMLTLAVENP +AS NIFN VSDRAVTLDGMAKLCAQAAGLPV+IVHYDPKA GIDAKKA
Sbjct: 181 SMLTLAVENPASASGNIFNCVSDRAVTLDGMAKLCAQAAGLPVKIVHYDPKAIGIDAKKA 240
Query: 336 FPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESL 395
FPFRNMHFYAEPRAAK+ILGW+S+T LP+DLKER+EEYVKIGRDKK ++FE+DDKILE+L
Sbjct: 241 FPFRNMHFYAEPRAAKEILGWKSSTYLPDDLKERYEEYVKIGRDKKDIKFELDDKILEAL 300
Query: 396 KVPIPV 401
K P V
Sbjct: 301 KAPAAV 306
>gi|357111159|ref|XP_003557382.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic-like
[Brachypodium distachyon]
Length = 394
Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust.
Identities = 259/331 (78%), Positives = 289/331 (87%), Gaps = 1/331 (0%)
Query: 65 FTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN 124
F+V+A AA KK VL+VNTNSGGHAVIGFY AK LL +GH VT++TVGDE SDKMKKPPF+
Sbjct: 56 FSVRAQAA-KKSVLVVNTNSGGHAVIGFYFAKALLAAGHAVTVLTVGDEGSDKMKKPPFS 114
Query: 125 RFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
RF+E+ SAG KTVWGDPA+VG VGG +FDVVLDNNGK+LDAV+PVADWAKS+GV QFLF
Sbjct: 115 RFSELTSAGAKTVWGDPADVGAAVGGASFDVVLDNNGKDLDAVKPVADWAKSAGVGQFLF 174
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEE 244
ISSAGIY P DEPPHVEGD VK AGHV VEKYI+ F +WASFRPQYMIGSGNNKDCEE
Sbjct: 175 ISSAGIYTPTDEPPHVEGDAVKGSAGHVGVEKYIAAEFGSWASFRPQYMIGSGNNKDCEE 234
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
WFFDRIVRKRPVPIPGSGMQ TNI+H RDL SMLT+AVE+P+AA+ IFN VSDRAVTLD
Sbjct: 235 WFFDRIVRKRPVPIPGSGMQLTNISHARDLGSMLTMAVESPDAAAGKIFNCVSDRAVTLD 294
Query: 305 GMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPE 364
G+AK+CA AAG VEIVHYDP AAG+DAKKAFPFRNMHFYAEPRAAK++LGW STTNLPE
Sbjct: 295 GLAKMCAAAAGAAVEIVHYDPAAAGVDAKKAFPFRNMHFYAEPRAAKEVLGWTSTTNLPE 354
Query: 365 DLKERFEEYVKIGRDKKAMQFEIDDKILESL 395
DLKERF EY GR KAM F++DDKIL ++
Sbjct: 355 DLKERFAEYASSGRGDKAMSFDLDDKILSAV 385
>gi|312273917|gb|ADQ57387.1| CSP41A-Y protein [Silene latifolia]
Length = 306
Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust.
Identities = 255/306 (83%), Positives = 282/306 (92%)
Query: 96 KELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDV 155
KELLGSGHEVT+ TVGDE+SDKMKKPPFNRF+EI SAGGKT+WG+PAEVG VVG +FDV
Sbjct: 1 KELLGSGHEVTVFTVGDESSDKMKKPPFNRFSEITSAGGKTIWGNPAEVGKVVGEESFDV 60
Query: 156 VLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE 215
VLDNNGK+L+ VRPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGDVVK DA HV VE
Sbjct: 61 VLDNNGKDLETVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDVVKADASHVAVE 120
Query: 216 KYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS 275
+YIS+ FS+WASFRPQYM GSGNNKDCEEWFFDRIVR RP+PIPGSGMQ TNI+HV+DLS
Sbjct: 121 EYISQTFSSWASFRPQYMTGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNISHVKDLS 180
Query: 276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
SMLTLAVENP +AS NIFN VSDRAVTLDGMAKLCAQAAGLPV+IVHYDPKA GIDAKKA
Sbjct: 181 SMLTLAVENPASASGNIFNCVSDRAVTLDGMAKLCAQAAGLPVKIVHYDPKAIGIDAKKA 240
Query: 336 FPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESL 395
FPFRNMHFYAEPRAAK+ILGW+S+T LP+DLKER+EEYVKIGRDKK ++FE+DDKIL++L
Sbjct: 241 FPFRNMHFYAEPRAAKEILGWKSSTYLPDDLKERYEEYVKIGRDKKDIKFELDDKILDAL 300
Query: 396 KVPIPV 401
K P V
Sbjct: 301 KAPAAV 306
>gi|312273913|gb|ADQ57385.1| CSP41A protein [Silene vulgaris]
Length = 306
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 254/306 (83%), Positives = 283/306 (92%)
Query: 96 KELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDV 155
KELLGSGH+VT+ TVGDE+SDKMKKPPFNRF+EI SAGGKTVWG+PAEVG VVG +FDV
Sbjct: 1 KELLGSGHQVTVFTVGDESSDKMKKPPFNRFSEITSAGGKTVWGNPAEVGKVVGEESFDV 60
Query: 156 VLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE 215
VLDNNGK+L+ VRPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGDVVK DA HV VE
Sbjct: 61 VLDNNGKDLETVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDVVKADASHVAVE 120
Query: 216 KYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS 275
+YIS+ FS+WASFRPQYMIGSGNNKDCEEWFFDRIVR RP+PIPGSGMQ TNI+HV+DLS
Sbjct: 121 EYISQTFSSWASFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNISHVKDLS 180
Query: 276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
SMLTLAVENP +AS NIFN VSDRAVTLDGMAKLCAQAAGLPV+IVHYDPKA GIDAKKA
Sbjct: 181 SMLTLAVENPTSASGNIFNCVSDRAVTLDGMAKLCAQAAGLPVKIVHYDPKAIGIDAKKA 240
Query: 336 FPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESL 395
FPFRNMHFYAEPRAAK+ILGW+++T LP+DLKER++EYVKIGRDKK ++FE+DDKIL++L
Sbjct: 241 FPFRNMHFYAEPRAAKEILGWKASTYLPDDLKERYDEYVKIGRDKKDIKFELDDKILDAL 300
Query: 396 KVPIPV 401
K P V
Sbjct: 301 KAPAAV 306
>gi|242043354|ref|XP_002459548.1| hypothetical protein SORBIDRAFT_02g006430 [Sorghum bicolor]
gi|241922925|gb|EER96069.1| hypothetical protein SORBIDRAFT_02g006430 [Sorghum bicolor]
Length = 407
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 259/336 (77%), Positives = 286/336 (85%), Gaps = 2/336 (0%)
Query: 67 VKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF 126
V+A AA+K+ VLIVNTNSGGHAVIGFY AKELL +GH VT++TVGDE SDKMKKPPF+RF
Sbjct: 67 VRAEAAKKQSVLIVNTNSGGHAVIGFYFAKELLAAGHAVTVLTVGDEGSDKMKKPPFSRF 126
Query: 127 NEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
+E+ SAGGKTVWGDPA+VG VGG +FDVVLDNNGK+LDAV+PVADWAKS+GV QFLFIS
Sbjct: 127 SELTSAGGKTVWGDPADVGAAVGGASFDVVLDNNGKDLDAVKPVADWAKSAGVGQFLFIS 186
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF-SNWASFRPQYMIGSGNNKDCEEW 245
SAGIYKP +EPPHVEGD VK AGHV VEKYI+E F S+WASFRPQYMIGSGNNKDCEEW
Sbjct: 187 SAGIYKPTEEPPHVEGDAVKESAGHVAVEKYIAEQFGSSWASFRPQYMIGSGNNKDCEEW 246
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
FFDRIVR RPVPIPG+GMQ TNIAHVRDLS ML+LAVE P AAS IFN VSDRAVTL G
Sbjct: 247 FFDRIVRNRPVPIPGNGMQLTNIAHVRDLSRMLSLAVEKPGAASGKIFNCVSDRAVTLSG 306
Query: 306 MAKLC-AQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPE 364
MAKLC A A VEIV YDP AAG+DAKKAFPFRNMHFYAEPRAAK LGW S+TNLPE
Sbjct: 307 MAKLCAAAAGADAVEIVLYDPAAAGVDAKKAFPFRNMHFYAEPRAAKAALGWTSSTNLPE 366
Query: 365 DLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIP 400
DLKER+ EY GR +K M F++DDKIL ++ P
Sbjct: 367 DLKERYAEYAASGRGEKPMNFDLDDKILAAVGKAAP 402
>gi|115471157|ref|NP_001059177.1| Os07g0212200 [Oryza sativa Japonica Group]
gi|34393296|dbj|BAC83225.1| putative mRNA binding protein precursor [Oryza sativa Japonica
Group]
gi|50508903|dbj|BAD31699.1| putative mRNA binding protein precursor [Oryza sativa Japonica
Group]
gi|113610713|dbj|BAF21091.1| Os07g0212200 [Oryza sativa Japonica Group]
gi|218199302|gb|EEC81729.1| hypothetical protein OsI_25360 [Oryza sativa Indica Group]
gi|222636664|gb|EEE66796.1| hypothetical protein OsJ_23541 [Oryza sativa Japonica Group]
Length = 392
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 249/344 (72%), Positives = 287/344 (83%), Gaps = 1/344 (0%)
Query: 52 ACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG 111
A A R +V+ A+ A KK VLIVNTN GGHAVIGFYLAK+LL +GH VT++TVG
Sbjct: 48 AAAAPRRVGAVTVRAQAAAGAGKKSVLIVNTNGGGHAVIGFYLAKDLLAAGHAVTVLTVG 107
Query: 112 DENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG-VTFDVVLDNNGKNLDAVRPV 170
DE SDKMKKPPF+RF+E+ SAG TVWGDPA+VG VGG +FDVVLDNNGK+LDAV+PV
Sbjct: 108 DEGSDKMKKPPFSRFSELTSAGATTVWGDPADVGAAVGGGASFDVVLDNNGKDLDAVKPV 167
Query: 171 ADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP 230
DWAK++GV QFLF+SSAGIY P+DEPPHVEGD VK AGHV VEKYI+E F +WASFRP
Sbjct: 168 VDWAKAAGVAQFLFVSSAGIYTPSDEPPHVEGDAVKESAGHVGVEKYIAEQFGSWASFRP 227
Query: 231 QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
QYMIGSGNNKDCEEWFFDRIVR RPVPIPGSGMQ TNI+HVRDL+SM+ LAVE+P AA+
Sbjct: 228 QYMIGSGNNKDCEEWFFDRIVRGRPVPIPGSGMQVTNISHVRDLASMVALAVESPGAAAG 287
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAA 350
IFN VSDRAVT +G+ K+CA AAG EI+HYDP A G+DAKKAFPFRNMHFYAEPRAA
Sbjct: 288 RIFNCVSDRAVTFNGLVKMCAAAAGAQPEILHYDPAAVGVDAKKAFPFRNMHFYAEPRAA 347
Query: 351 KDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILES 394
K++LGWRS+TNLPEDLKERF EY GR +K M F++DDKI+ +
Sbjct: 348 KEVLGWRSSTNLPEDLKERFAEYASSGRGQKEMSFDLDDKIIAA 391
>gi|168020071|ref|XP_001762567.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686300|gb|EDQ72690.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 412
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 260/407 (63%), Positives = 309/407 (75%), Gaps = 11/407 (2%)
Query: 4 LASSSSSLLLSSP-----PSKLAQASLPPSLRL-----SFSSYSHLSSLVSISPSSFLAC 53
LA S +SL L S PS S+ PSL L +FSS SH + +S S+
Sbjct: 3 LAQSVASLTLGSTAQLQGPSSATPGSVRPSLSLRSNAAAFSSQSHFAGSFGLSWSAQSNG 62
Query: 54 PASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE 113
++S+ + +A V+A+A E KKVLIVNTNSGGHAVIGF+ AK+L+ +GH VTI+TVG+E
Sbjct: 63 VSTSKSNRGAALVVRAAAGESKKVLIVNTNSGGHAVIGFWTAKDLVDAGHSVTILTVGEE 122
Query: 114 NSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADW 173
SDKMKK PF+RFNE+ G +TVWG+P+++G VG +FDVVLDNNGK LD V+PVADW
Sbjct: 123 LSDKMKKQPFSRFNELREIGVETVWGEPSDLGAAVGSASFDVVLDNNGKTLDVVQPVADW 182
Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-NFSNWASFRPQY 232
AK++G KQFLFISSAGIYK E PHVEGD VK DAGH QVE Y++E +WASFRPQY
Sbjct: 183 AKANGAKQFLFISSAGIYKSTFEQPHVEGDAVKEDAGHKQVENYLAELGLESWASFRPQY 242
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
M G GNNKDCEEWFFDRI R RPVPIP G+Q TNI+HVRDLSSMLTLAV PEAA+ +I
Sbjct: 243 MTGDGNNKDCEEWFFDRIARGRPVPIPSPGIQVTNISHVRDLSSMLTLAVGKPEAANGSI 302
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 352
FN VSDR T DG+ K+CA+AAG +IVHYDPKA G+DAKKAFPFRNMHFYAEPRAAK
Sbjct: 303 FNCVSDRGTTFDGLVKMCAKAAGKEAKIVHYDPKAIGVDAKKAFPFRNMHFYAEPRAAKT 362
Query: 353 ILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 399
LGW S TNL EDLK R+E+YVKIGRDKK ++FE+DDKILE + P+
Sbjct: 363 KLGWESKTNLAEDLKARWEDYVKIGRDKKDIKFELDDKILEVVSEPV 409
>gi|296086699|emb|CBI32334.3| unnamed protein product [Vitis vinifera]
Length = 284
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 246/284 (86%), Positives = 256/284 (90%)
Query: 118 MKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS 177
MKKPPF+RF+EI SAGGKTVWGDPAEVG VV G FDVVLDNNGK++D VRPV DWAKSS
Sbjct: 1 MKKPPFSRFSEITSAGGKTVWGDPAEVGKVVAGAAFDVVLDNNGKDIDTVRPVVDWAKSS 60
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSG 237
GV+QFLFISSAGIYKP DEPPHVEGD+VK DAGHV VE YISE F +WA FRPQYMIGSG
Sbjct: 61 GVEQFLFISSAGIYKPTDEPPHVEGDIVKADAGHVGVETYISEVFGSWAIFRPQYMIGSG 120
Query: 238 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
NNKDCEEWFFDRIVR RPVPIPGSGMQ TNIAHVRDLSSMLTLAVENP AAS NIFN VS
Sbjct: 121 NNKDCEEWFFDRIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVENPAAASGNIFNCVS 180
Query: 298 DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWR 357
DRAVTLDGMAKLCAQAAG PV IVHYDPKA GIDAKKAFPFRNMHFYAEPRAAKDILGW
Sbjct: 181 DRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHFYAEPRAAKDILGWH 240
Query: 358 STTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIPV 401
TNLPEDLKERF+EYVKIGRDKK M+FEIDDKILESLKV + V
Sbjct: 241 GITNLPEDLKERFDEYVKIGRDKKPMKFEIDDKILESLKVSVAV 284
>gi|414884012|tpg|DAA60026.1| TPA: hypothetical protein ZEAMMB73_761585 [Zea mays]
Length = 403
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 249/331 (75%), Positives = 279/331 (84%), Gaps = 3/331 (0%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
+K VLIVNTN GGHAVIGFY AKELL +GH VT++TVGDE SDKMKKPPF+RF+E+ SAG
Sbjct: 71 RKSVLIVNTNGGGHAVIGFYFAKELLAAGHAVTVLTVGDEASDKMKKPPFSRFSELTSAG 130
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
G+TVWGDPA+VG VGG +FDVVLDNNGK+LDAV+PVADWAK++GV QFLFISSAGIYKP
Sbjct: 131 GRTVWGDPADVGAAVGGASFDVVLDNNGKDLDAVKPVADWAKTAGVGQFLFISSAGIYKP 190
Query: 194 ADEPPHVEGDVVKPDAGHVQVEKYISENF-SNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+EPPHVEGD VK AGHV VEKYI+E F S WASFRPQYMIGSGNNKDCEEWFFDRIVR
Sbjct: 191 TEEPPHVEGDAVKESAGHVGVEKYIAEQFGSCWASFRPQYMIGSGNNKDCEEWFFDRIVR 250
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC-A 311
RPVPIPG+GMQ TN+AHVRDLSSML+LAVE P AA+ +FN VSDRAVTL GMAKLC A
Sbjct: 251 NRPVPIPGNGMQLTNVAHVRDLSSMLSLAVEKPGAAAGRVFNCVSDRAVTLAGMAKLCAA 310
Query: 312 QAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 371
A V+IV YDP A G+DAKKAFPFRNMHFY+EPRAAK+ LGW STTNLPEDLKER+
Sbjct: 311 AAGADAVDIVLYDPAAVGVDAKKAFPFRNMHFYSEPRAAKEALGWTSTTNLPEDLKERYA 370
Query: 372 EYVKIGRDKKAMQFEIDDKILESL-KVPIPV 401
EY GR K M F++DD IL ++ K P V
Sbjct: 371 EYAASGRGDKPMAFDLDDVILAAVGKAPASV 401
>gi|148906434|gb|ABR16370.1| unknown [Picea sitchensis]
Length = 423
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 246/367 (67%), Positives = 293/367 (79%), Gaps = 4/367 (1%)
Query: 37 SHLSSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAK 96
S + S+ SI P F PA R S++ + A + KKVL+VNTNSGGHA+IGF+ AK
Sbjct: 55 SQIYSIRSI-PHPFNWTPARRRPRSLTVKAMAAIGEKSKKVLVVNTNSGGHAMIGFWFAK 113
Query: 97 ELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVV 156
+L+ +GH+VT+ TVG+E S+KM KPPF+RF+E+ + G +T WG PAE+G + FD V
Sbjct: 114 DLISAGHQVTVFTVGEEASEKMTKPPFSRFSELRAIGVQTTWGKPAEIGKIFESTMFDAV 173
Query: 157 LDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK 216
LDNNGK+LD+V+PVADWAK+ G QFL+ISSAGIYKP DEPPHVEGD+VK DA HV VE
Sbjct: 174 LDNNGKDLDSVKPVADWAKTIGANQFLYISSAGIYKPTDEPPHVEGDIVKADASHVAVED 233
Query: 217 YI-SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS 275
Y+ S +F++W +FRPQYMIGSGNNKDCEEWFFDRIVR +PVPIPGSGMQ TNIAHVRD+S
Sbjct: 234 YLRSLSFNSWCTFRPQYMIGSGNNKDCEEWFFDRIVRDKPVPIPGSGMQVTNIAHVRDVS 293
Query: 276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKK 334
SML LAVE P AA+ N+FN V DRAVT DG+ KLCA+AAG IVHYDPK+ GIDAKK
Sbjct: 294 SMLVLAVEKPTAANGNVFNAVCDRAVTFDGLTKLCAKAAGRETAAIVHYDPKSLGIDAKK 353
Query: 335 AFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDK-ILE 393
AFPFRNMHFYAEPRAAK+IL WRSTTNLP+DLKERFEEYV GRDKK ++FE+DDK ILE
Sbjct: 354 AFPFRNMHFYAEPRAAKEILAWRSTTNLPQDLKERFEEYVASGRDKKDIKFELDDKIILE 413
Query: 394 SLKVPIP 400
S + P
Sbjct: 414 SSRAAEP 420
>gi|302819110|ref|XP_002991226.1| hypothetical protein SELMODRAFT_448337 [Selaginella moellendorffii]
gi|300140937|gb|EFJ07654.1| hypothetical protein SELMODRAFT_448337 [Selaginella moellendorffii]
Length = 401
Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust.
Identities = 254/382 (66%), Positives = 295/382 (77%), Gaps = 5/382 (1%)
Query: 18 SKLAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPASSRR---SSVSAFTVKASAAEK 74
SKL + SL L S S L SL S A SSRR + A A+
Sbjct: 20 SKLTPGYIASSLSLRSPSASSLHSL-GTSSGIAGAVKKSSRRWRAAKTVAMAAAANEVSN 78
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
+KVLIVNTNSGGHAVIGF+LAK+L+ +GHEVT+MTVG+E+SDKMKKPPF+RF+E+ G
Sbjct: 79 RKVLIVNTNSGGHAVIGFWLAKDLVAAGHEVTVMTVGEESSDKMKKPPFSRFSELRDLGV 138
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
TVWGDP +VG VGG +F VLDNNGK+LDAV+PV DWAKS GV+QFLFISSAGIYK +
Sbjct: 139 STVWGDPKDVGAAVGGKSFHAVLDNNGKDLDAVKPVVDWAKSQGVEQFLFISSAGIYKTS 198
Query: 195 DEPPHVEGDVVKPDAGHVQVEKYISEN-FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK 253
DEPPHVEGD VK DAGHV VE YIS++ F W+SFRPQYM GSGNNKDCEEWFFDRIVR
Sbjct: 199 DEPPHVEGDPVKVDAGHVGVEDYISKSAFKFWSSFRPQYMTGSGNNKDCEEWFFDRIVRD 258
Query: 254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 313
+PVPIP G+Q TNIAHV DLSSM+TLA+ P A+++ IFN VSDRAVT DG+ +LCA+A
Sbjct: 259 KPVPIPSPGIQVTNIAHVSDLSSMITLAIGKPSASNATIFNAVSDRAVTFDGLVRLCARA 318
Query: 314 AGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 373
A +IVHYD KA GIDAKKAFPFRNMHFYAEPRAAK+ LGW S+TNL E LKER+EEY
Sbjct: 319 AAKEAKIVHYDAKALGIDAKKAFPFRNMHFYAEPRAAKEKLGWTSSTNLSEALKERYEEY 378
Query: 374 VKIGRDKKAMQFEIDDKILESL 395
+KIGRDKK ++FEIDD IL +
Sbjct: 379 IKIGRDKKDIKFEIDDTILSKV 400
>gi|302818999|ref|XP_002991171.1| hypothetical protein SELMODRAFT_185868 [Selaginella moellendorffii]
gi|300140999|gb|EFJ07715.1| hypothetical protein SELMODRAFT_185868 [Selaginella moellendorffii]
Length = 401
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 260/399 (65%), Positives = 304/399 (76%), Gaps = 13/399 (3%)
Query: 10 SLLLSSPPSKLAQASL------PPSLRLSFSSYS-HLSSLVSISPSSFLACPA--SSRR- 59
+L L P S QASL P L SFS S SSL S+ SS +A SSRR
Sbjct: 2 ALSLQFPVSTPRQASLEISKLTPGCLASSFSLRSPSTSSLHSLGTSSGIATAVKKSSRRW 61
Query: 60 --SSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK 117
+ A A+ +KVLIVNTNSGGHAVIGF+LAK+L+ +GHEVT+MTVG+E+SDK
Sbjct: 62 RAAKTVAMAAAANEVSNRKVLIVNTNSGGHAVIGFWLAKDLVAAGHEVTVMTVGEESSDK 121
Query: 118 MKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS 177
MKKPPF+RF+E+ G TVWGDP +VG VGG +F VLDNNGK+LDAV+PV DWAKS
Sbjct: 122 MKKPPFSRFSELRDLGVSTVWGDPKDVGAAVGGKSFHAVLDNNGKDLDAVKPVVDWAKSQ 181
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN-FSNWASFRPQYMIGS 236
GV+QFLFISSAGIYK +DEPPHVEGD VK DAGHV VE YIS++ F W+SFRPQYM GS
Sbjct: 182 GVEQFLFISSAGIYKTSDEPPHVEGDPVKVDAGHVGVEDYISKSAFKFWSSFRPQYMTGS 241
Query: 237 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
GNNKDCEEWFFDRIVR +PVPIP G+Q TNIAHV DLSSM+TLA+ P A+++ IFN V
Sbjct: 242 GNNKDCEEWFFDRIVRDKPVPIPSPGIQVTNIAHVSDLSSMITLAIGKPSASNATIFNAV 301
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW 356
SD AVT DG+ +LCA+AA +IVHYD KA GIDA+KAFPFRNMHFYAEPRAAK+ LGW
Sbjct: 302 SDHAVTFDGLVRLCARAAAKEAKIVHYDAKALGIDARKAFPFRNMHFYAEPRAAKEKLGW 361
Query: 357 RSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESL 395
S+TNL E LKER+EEY+KIGRDKK ++FEIDD IL +
Sbjct: 362 TSSTNLSEALKERYEEYIKIGRDKKDIKFEIDDTILSKV 400
>gi|302819120|ref|XP_002991231.1| hypothetical protein SELMODRAFT_133157 [Selaginella moellendorffii]
gi|300140942|gb|EFJ07659.1| hypothetical protein SELMODRAFT_133157 [Selaginella moellendorffii]
Length = 401
Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust.
Identities = 249/379 (65%), Positives = 291/379 (76%), Gaps = 5/379 (1%)
Query: 18 SKLAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPASSRR---SSVSAFTVKASAAEK 74
SKL + S L S S L SL S S +A SSRR + A A+
Sbjct: 20 SKLTPGYIASSFSLQSPSTSSLHSL-GTSSSIAMAVKKSSRRWRAAKTVAMAAAANEVSN 78
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
+KVLIVNTNSGGHAVIGF+LAK+L+ +GHEVT+MTVG+E+SDKMKKPPF+RF+E+ G
Sbjct: 79 RKVLIVNTNSGGHAVIGFWLAKDLVAAGHEVTVMTVGEESSDKMKKPPFSRFSELRDLGV 138
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
TVWGDP +VG VGG +F VLDNNGK+LDAV+PV DWAKS GV+QFLFISSAGIYK +
Sbjct: 139 STVWGDPKDVGAAVGGKSFHAVLDNNGKDLDAVKPVVDWAKSQGVEQFLFISSAGIYKTS 198
Query: 195 DEPPHVEGDVVKPDAGHVQVEKYISE-NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK 253
DEPPH+EGD VK DAGHV VE YIS+ F +SFRPQYM GSGNNKDCEEWFFDRIVR
Sbjct: 199 DEPPHLEGDPVKADAGHVGVEDYISKLAFKFCSSFRPQYMTGSGNNKDCEEWFFDRIVRD 258
Query: 254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 313
+PVPIP G++ TNIAHV DLSSM+TLA+ P A+++ IFN VSD AVT DG+ +LCA+A
Sbjct: 259 KPVPIPSPGIRVTNIAHVSDLSSMITLAIGKPSASNATIFNAVSDHAVTFDGLVRLCARA 318
Query: 314 AGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 373
A +IVHYD KA GIDAKKAFPFRNMHFYAEPRAAK+ LGW S+ NL E LKER+EEY
Sbjct: 319 AAKEAKIVHYDAKALGIDAKKAFPFRNMHFYAEPRAAKEKLGWTSSINLSEALKERYEEY 378
Query: 374 VKIGRDKKAMQFEIDDKIL 392
+KIGRDKK ++FEIDD IL
Sbjct: 379 IKIGRDKKDIKFEIDDTIL 397
>gi|449532425|ref|XP_004173181.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like, partial [Cucumis sativus]
Length = 274
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 231/272 (84%), Positives = 246/272 (90%)
Query: 128 EIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS 187
EIVS GGKTVWGDPAE+G VV G +FDVVLDNNGK++D VRPV DWAKSSGVKQFLFISS
Sbjct: 1 EIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDTVRPVIDWAKSSGVKQFLFISS 60
Query: 188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
AGIYK DEPPHVEGD VK DAGHV VEKYI+E FS+WA FRPQYMIGSGNNKDCEEWFF
Sbjct: 61 AGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAVFRPQYMIGSGNNKDCEEWFF 120
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
DRIVR RP+PIPGSGMQ TNIAHVRDLSSMLTLAVE P+ A SNIFN VS RAVTLDGMA
Sbjct: 121 DRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMA 180
Query: 308 KLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLK 367
KLCAQAAG PV IVHYDPKA G+DAKKAFPFRNMHFYAEPRAA++ILGW TTNLPEDLK
Sbjct: 181 KLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDLK 240
Query: 368 ERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 399
ERFEEYVKIGRDKKA++FE+DDKILESL VP+
Sbjct: 241 ERFEEYVKIGRDKKAIKFELDDKILESLNVPV 272
>gi|326523629|dbj|BAJ92985.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 400
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/335 (70%), Positives = 264/335 (78%), Gaps = 32/335 (9%)
Query: 77 VLIVNTNSGGHAV----------------IGFYLAKELLGSGHEVTIMTVGDENSDKMKK 120
VL+VNTNSGGHAV T++TVGDE SDKMKK
Sbjct: 73 VLVVNTNSGGHAVIGFYFAKALLAAGHDV----------------TLLTVGDEASDKMKK 116
Query: 121 PPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK 180
PPF+RF+E+ SAG KTVWGDPA+VG VG +FDVVLDNNGK+LDAV+PVADWAK++GV
Sbjct: 117 PPFSRFSELTSAGAKTVWGDPADVGAAVGAASFDVVLDNNGKDLDAVKPVADWAKAAGVG 176
Query: 181 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNK 240
QFLFISSAGIY DEPPHVEGD VK AGHV VEKYI+ F +WASFRPQYM GSGNNK
Sbjct: 177 QFLFISSAGIYLQTDEPPHVEGDAVKESAGHVGVEKYIAAEFGSWASFRPQYMTGSGNNK 236
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
DCEEWFFDR+VRKRPVPIPGSGMQ TNI+H RDL SMLTLAVENP+AA+ IFN VSDR
Sbjct: 237 DCEEWFFDRVVRKRPVPIPGSGMQLTNISHARDLGSMLTLAVENPDAAAGKIFNCVSDRG 296
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
VTLDG+AK+CA AAG VEIVHYDP A G+DAKKAFPFRNMHFYAEPRAAK++LGW STT
Sbjct: 297 VTLDGLAKMCAAAAGATVEIVHYDPAAVGVDAKKAFPFRNMHFYAEPRAAKEVLGWTSTT 356
Query: 361 NLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESL 395
NLPEDLKERF EY GR +KAM F++DDKIL ++
Sbjct: 357 NLPEDLKERFAEYASSGRGEKAMTFDLDDKILAAV 391
>gi|255078270|ref|XP_002502715.1| predicted protein [Micromonas sp. RCC299]
gi|226517980|gb|ACO63973.1| predicted protein [Micromonas sp. RCC299]
Length = 371
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/371 (53%), Positives = 255/371 (68%), Gaps = 14/371 (3%)
Query: 39 LSSLVSISPSSFLACP--------ASSRRSSVSAFTVKA---SAAEKKKVLIVNTNSGGH 87
++S ++ +PS + P AS R + V+ + A +A +KVLIVNTN GGH
Sbjct: 2 VASALAAAPSVCIRTPSGARQIRRASGRNARVARRAIPAVISAAVAPQKVLIVNTNGGGH 61
Query: 88 AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNV 147
A IGF+LAK L GH VT+ T+G ++ KM+KPPF FNE+ SAG +TVW DP E+
Sbjct: 62 ANIGFWLAKTLAAQGHSVTLNTIGSKDDKKMQKPPFTYFNELTSAGVQTVWADPGELATK 121
Query: 148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP 207
G FDVV+DNNGK+LD+V PVA +AK G KQFLF+SSAG+YKP PPH+EGD VK
Sbjct: 122 AAGAQFDVVVDNNGKDLDSVGPVAAFAKQCGAKQFLFVSSAGMYKPTPTPPHLEGDAVKE 181
Query: 208 DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN 267
AGH QVE ++ ++ASFRPQY G GNNKDCEE+FFDR+VR RPV +PGSG Q +
Sbjct: 182 SAGHAQVEAKLATMPFSFASFRPQYFTGYGNNKDCEEYFFDRLVRGRPVLVPGSGDQLSV 241
Query: 268 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 327
+AH D+++M+ AV NP AA+ IFN V+++AVTL+GM +LCA AAG+ +IV+YDPK
Sbjct: 242 VAHAEDVATMMAAAVGNP-AANGVIFNAVTNKAVTLNGMVQLCAAAAGVEPKIVNYDPKK 300
Query: 328 --AGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQF 385
G++ KKAFPFR +HFY+ P A +L W+ +L DLKERFE Y GR K M F
Sbjct: 301 LPEGVEVKKAFPFRPIHFYSYPANALKLLDWQPKHDLAADLKERFEFYKASGRANKDMSF 360
Query: 386 EIDDKILESLK 396
E+DDKIL SL+
Sbjct: 361 ELDDKILASLR 371
>gi|308811849|ref|XP_003083232.1| PREDICTED OJ1664_D08.105 gene product (ISS) [Ostreococcus tauri]
gi|116055111|emb|CAL57507.1| PREDICTED OJ1664_D08.105 gene product (ISS) [Ostreococcus tauri]
Length = 358
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/339 (54%), Positives = 236/339 (69%), Gaps = 3/339 (0%)
Query: 59 RSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM 118
R++ + V SA+ KKKVLIVNTN GGHA IGF+LAK L G+GHEVT+ VG E+ KM
Sbjct: 19 RNARAHGVVDVSASGKKKVLIVNTNGGGHANIGFWLAKTLAGAGHEVTMNVVGAEDDKKM 78
Query: 119 KKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG 178
K PF+ F+EI S G T W DPA+V G FDVV+DNNGK++D V PVAD+A ++G
Sbjct: 79 AKTPFSLFDEIRSMGVTTTWADPADVATKHAGAKFDVVVDNNGKDMDTVGPVADFAVAAG 138
Query: 179 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGN 238
QFLF+SSAGIYKP PPHVEGD VK AGH VE ++ +SFRPQY+ G G+
Sbjct: 139 ASQFLFVSSAGIYKPTPCPPHVEGDAVKETAGHAVVEAHLKTLPLKMSSFRPQYLTGYGS 198
Query: 239 NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
NKDCEEWFFDR+VR RPV +PGSG Q +++ H DL++M+ A+ N + A+ IFN V
Sbjct: 199 NKDCEEWFFDRLVRGRPVLVPGSGDQLSSVTHAEDLATMIAAAIGN-DGAAGEIFNCVMP 257
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPK-AAGIDAKKAFPFRNMHFYAEPRAAKDILGWR 357
+AVTL+GM +LCA AAG+ +I++YDPK ++ KKAFPFR +HFY+ A+ +LGW
Sbjct: 258 KAVTLNGMVELCAAAAGVEAKIINYDPKDVPDVEVKKAFPFRPIHFYSSSAKAQKVLGWS 317
Query: 358 -STTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESL 395
+L +LKERF Y GRD K M FE+DDKIL +L
Sbjct: 318 PKHPDLGAELKERFAYYKSTGRDAKEMAFEVDDKILAAL 356
>gi|145353867|ref|XP_001421221.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145353942|ref|XP_001421256.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581458|gb|ABO99514.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]
gi|144581493|gb|ABO99549.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]
Length = 333
Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 181/328 (55%), Positives = 234/328 (71%), Gaps = 3/328 (0%)
Query: 70 SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
++ EKK VLIVNTN GGHA IGF+LAK L G+GH+VT+ VG E+ KM K PF+ F+EI
Sbjct: 5 ASGEKKSVLIVNTNGGGHANIGFWLAKTLAGAGHDVTMNVVGAEDDKKMAKTPFSLFDEI 64
Query: 130 VSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
G KTVW +P EV + G FDVV+DNNGK++D V PVAD+A ++G QFLF+SSAG
Sbjct: 65 RGMGVKTVWANPDEVASKHAGAKFDVVVDNNGKDMDTVGPVADFAVAAGASQFLFVSSAG 124
Query: 190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
IYKP PPHVEGD VK +GH VE ++ +SFRPQY+ G G+NKDCEEWFFDR
Sbjct: 125 IYKPTPCPPHVEGDAVKETSGHAVVEAHLKTLPLKMSSFRPQYLTGYGSNKDCEEWFFDR 184
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
VR RP+ +PGSG Q +++ H DL++M+ AV N +AA+ IFN V+ +AVTL+GMA+L
Sbjct: 185 AVRGRPILVPGSGDQLSSVTHAEDLATMIAAAVGN-DAAAGEIFNCVTTKAVTLNGMAEL 243
Query: 310 CAQAAGLPVEIVHYDPK-AAGIDAKKAFPFRNMHFYAEPRAAKDILGWR-STTNLPEDLK 367
CA+AAG+ +++YDPK ++ KKAFPFR +HFY+ A+ +LGW +L +LK
Sbjct: 244 CAKAAGVEPNVINYDPKDVPDVEVKKAFPFRPIHFYSSSAKAQAVLGWSPKHPDLAAELK 303
Query: 368 ERFEEYVKIGRDKKAMQFEIDDKILESL 395
ERF Y IGRDKK M FE DDKIL ++
Sbjct: 304 ERFAYYKSIGRDKKEMSFETDDKILAAI 331
>gi|303290011|ref|XP_003064293.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454609|gb|EEH51915.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 362
Score = 347 bits (889), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 181/335 (54%), Positives = 228/335 (68%), Gaps = 12/335 (3%)
Query: 72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS 131
A + KVLIVNTN GGHA IGF+LAK L GH VT+ VG + KM+KPPF F E+ S
Sbjct: 27 ARRAKVLIVNTNGGGHANIGFWLAKTLAAHGHAVTLCVVGTADDKKMQKPPFTYFGELTS 86
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
AG KT+W +P ++ + G FDVV+DNNGK++D V PVAD+A +G KQF F+SSAG+Y
Sbjct: 87 AGVKTMWANPNDLATLPGQPEFDVVVDNNGKDMDTVGPVADFAVKAGAKQFFFVSSAGMY 146
Query: 192 KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNK---------DC 242
P PPH+EGD VK AGH +VE ++ +SFRPQY G GNNK DC
Sbjct: 147 IPTVTPPHLEGDAVKESAGHAKVEAHLKTMPFKMSSFRPQYFTGYGNNKGAFYISYHTDC 206
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
EEWFFDRIVR R +P+PGSG Q + +AH D+++M+ AV N +AA+ IFN V++RAVT
Sbjct: 207 EEWFFDRIVRGRTIPVPGSGDQLSVVAHAEDVATMMAAAVGN-DAAAGQIFNAVTNRAVT 265
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPKAA--GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
L+GMA+LCA AAG +I +YDPK G++ KKAFPFR +HFY+ P A ++L W
Sbjct: 266 LNGMAQLCAAAAGAEPKIANYDPKNLPDGVEVKKAFPFRPIHFYSYPAKALELLDWAPKH 325
Query: 361 NLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESL 395
+L DLKERF YV GRDKK M FE DDKIL +
Sbjct: 326 DLASDLKERFAFYVASGRDKKEMTFETDDKILRHI 360
>gi|412986493|emb|CCO14919.1| predicted protein [Bathycoccus prasinos]
Length = 369
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 178/358 (49%), Positives = 235/358 (65%), Gaps = 15/358 (4%)
Query: 52 ACPASSRRSSVSAFTV--------KAS-AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSG 102
+C SSR++ T+ K S E K VLIVNTN GGHA IGF+L+K L +
Sbjct: 13 SCAGSSRKTFAQKRTLLNTPNAVNKVSFKVENKSVLIVNTNGGGHANIGFWLSKTLASAK 72
Query: 103 HEVTIMTVGDENSDKMKKPPFNRF-NEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNG 161
H+VT+ VG+E KM+K PF F ++ G KT+W +PA++ + + G FD+V DNNG
Sbjct: 73 HDVTLCVVGEETDKKMQKAPFTYFEKDLKPMGVKTMWSNPADLKSNLSGAKFDIVCDNNG 132
Query: 162 KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE- 220
K+LD+V PVA++AK +G +QF F+SSAGIYKP PPHVEGD VK AGH VEK++ +
Sbjct: 133 KDLDSVGPVAEFAKEAGAEQFFFVSSAGIYKPTPTPPHVEGDAVKETAGHAIVEKHLVDM 192
Query: 221 NF-SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 279
F ASFRPQY+ G G+NKDCEE+FFDRI R +P+ IPGSG QF +++H DL++M+
Sbjct: 193 KFPKGMASFRPQYLTGYGSNKDCEEYFFDRIQRGKPIVIPGSGDQFASVSHAEDLATMIA 252
Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAFPF 338
AV+N A IFN V+ + VTL GMA++CA+A G IV Y + G++AKK FPF
Sbjct: 253 SAVDNAN-AKDEIFNCVTQKGVTLRGMAEVCAKAMGKEATIVTYKEGSVEGVEAKKQFPF 311
Query: 339 RNMHFYAEPRAAKDILGWR-STTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESL 395
R +HFYA A LGW NL LK+R+ EY GRDKK M FE+D+K+L +L
Sbjct: 312 RVVHFYASSAKAMAKLGWEPKHPNLEATLKDRYAEYCASGRDKKEMTFELDEKVLATL 369
>gi|117607073|gb|ABK42080.1| mRNA-binding protein [Capsicum annuum]
Length = 169
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 145/167 (86%), Positives = 155/167 (92%)
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
MIGSGNNKDCEEWFFDRIVR RPV IPGSGM TNIAHVRDLSSMLTLAV+NP AAS +I
Sbjct: 1 MIGSGNNKDCEEWFFDRIVRGRPVLIPGSGMHLTNIAHVRDLSSMLTLAVQNPAAASGHI 60
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 352
FN VSDRAVTLDGMA+LCA+AAG VEIVHYDPKA G+DAKKAFPFRNMHFYAEPRAAK+
Sbjct: 61 FNCVSDRAVTLDGMARLCAKAAGTSVEIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAKE 120
Query: 353 ILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 399
ILGW +TTNLPEDLKERFEEYVKIGRDKK M+FE+DDKILESLKVP+
Sbjct: 121 ILGWSATTNLPEDLKERFEEYVKIGRDKKEMKFELDDKILESLKVPV 167
>gi|302830021|ref|XP_002946577.1| chloroplast ribosome-associated protein [Volvox carteri f.
nagariensis]
gi|300268323|gb|EFJ52504.1| chloroplast ribosome-associated protein [Volvox carteri f.
nagariensis]
Length = 440
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 152/328 (46%), Positives = 199/328 (60%), Gaps = 10/328 (3%)
Query: 77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT 136
VLI NT GGHA IG YLAKELL GH+VTIM GDE S KK PF++++E+ G
Sbjct: 33 VLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGDE-SKLTKKTPFSKYSELARDGATI 91
Query: 137 VWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD- 195
WGDP + G +FDVV DNNGK+L + +P+ D K V ++F+SSAG YK AD
Sbjct: 92 AWGDPTKPSTYPRG-SFDVVYDNNGKDLSSCQPMIDHFKHK-VDHYVFVSSAGAYK-ADS 148
Query: 196 -EPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKR 254
EP HVEGD K AGHV+VE Y+ + + F+P Y+ G KDCE+WF DRI+R R
Sbjct: 149 IEPMHVEGDARKSTAGHVEVEAYLEKARVPYTVFQPLYIYGPNTAKDCEQWFVDRIIRDR 208
Query: 255 PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA 314
PVPIP G+Q T++ HV D+++ML L N EA ++N+ SDR ++ G+ K A+A
Sbjct: 209 PVPIPSPGIQLTSLTHVEDVAAMLALVPGNREAI-GQMYNVCSDRCISFVGICKSVAKAL 267
Query: 315 GLPVEIVHYDPKAAGIDAK---KAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 371
G IV Y P+ G + FPFR +HF+A AK LGW+ + +D+
Sbjct: 268 GKEANIVLYSPEKVGTGKSGKAEGFPFRTVHFFASSDKAKRELGWKPKHDFQKDVAALVA 327
Query: 372 EYVKIGRDKKAMQFEIDDKILESLKVPI 399
+Y GRDKK + F IDDKILE+L P
Sbjct: 328 DYKAQGRDKKDVDFSIDDKILEALGKPF 355
>gi|159464623|ref|XP_001690541.1| chloroplast stem-loop-binding protein [Chlamydomonas reinhardtii]
gi|158280041|gb|EDP05800.1| chloroplast stem-loop-binding protein [Chlamydomonas reinhardtii]
Length = 439
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/325 (46%), Positives = 199/325 (61%), Gaps = 12/325 (3%)
Query: 77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM-KKPPFNRFNEIVSAGGK 135
VLI NT GGHA IG YLAKELL GH+VTIM GD SDK+ KK P+ +++++ G
Sbjct: 33 VLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGD--SDKLTKKNPYAKYSDLERQGLN 90
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
VW DPA+ G TFDVV DNNGK+L + +P+ D K V ++F+SSAG YK AD
Sbjct: 91 VVWADPAKPSTYPRG-TFDVVYDNNGKDLASCQPLIDHFKHK-VDHYVFVSSAGAYK-AD 147
Query: 196 --EPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK 253
EP HVEGD K AGHV+VE Y+ + + F+P Y+ G KDCE+WF DRI+R
Sbjct: 148 PIEPMHVEGDARKSTAGHVEVEAYLEKARLPYTVFQPLYIYGPNTAKDCEQWFVDRIIRD 207
Query: 254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 313
RPV +P G+Q T++ HV D++SML AV AA +N+ SDR +T G+AK +A
Sbjct: 208 RPVLLPAPGVQLTSLTHVEDVASMLA-AVPGNRAAIGQHYNVCSDRCITFTGIAKAIGKA 266
Query: 314 AGLPVEIVHYDPKAAGIDAK---KAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 370
G EI+ Y P+ G + FPFR +HF+A AK LGW+ + +D++
Sbjct: 267 LGKDPEIILYSPEKVGTGKSGKAEGFPFRTVHFFASADKAKRELGWKPKHDFQKDVQGLV 326
Query: 371 EEYVKIGRDKKAMQFEIDDKILESL 395
+Y GRDKK + F +DDKIL +L
Sbjct: 327 NDYKANGRDKKEVDFSVDDKILAAL 351
>gi|34398358|gb|AAO22241.1| 41 kDa ribosome-associated protein precursor [Chlamydomonas
reinhardtii]
Length = 439
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 150/325 (46%), Positives = 199/325 (61%), Gaps = 12/325 (3%)
Query: 77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM-KKPPFNRFNEIVSAGGK 135
VLI NT GGHA IG YLAKELL GH+VTIM GD SDK+ KK P+ +++++ G
Sbjct: 33 VLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGD--SDKLTKKNPYAKYSDLERQGLN 90
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
VW DPA+ G TFDVV DNNGK+L + +P+ D K V ++F+SSAG YK AD
Sbjct: 91 VVWADPAKPSTYPRG-TFDVVYDNNGKDLASCQPLIDHFKHK-VDHYVFVSSAGAYK-AD 147
Query: 196 --EPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK 253
EP HVEGD K AGHV+VE Y+ + + F+P Y+ G KDCE+WF DRI+R
Sbjct: 148 PIEPMHVEGDPRKSTAGHVEVEAYLEKARLPYTVFQPLYIYGPNTAKDCEQWFVDRIIRD 207
Query: 254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 313
RPV +P G+Q T++ HV D++SML AV AA +N+ SDR +T G+AK +A
Sbjct: 208 RPVLLPAPGVQLTSLTHVEDVASMLA-AVPGNRAAIGQHYNVCSDRCITFTGIAKAIGKA 266
Query: 314 AGLPVEIVHYDPKAAGIDAK---KAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 370
G EI+ Y P+ G + FPFR +HF+A AK LGW+ + +D++
Sbjct: 267 LGKDPEIILYSPEKVGTGKSGKAEGFPFRTVHFFASADKAKRELGWKPKHDFQKDVQGLV 326
Query: 371 EEYVKIGRDKKAMQFEIDDKILESL 395
+Y GRDKK + F +DDKIL +L
Sbjct: 327 NDYKANGRDKKEVDFSVDDKILAAL 351
>gi|384251865|gb|EIE25342.1| NAD(P)-binding protein [Coccomyxa subellipsoidea C-169]
Length = 367
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/346 (42%), Positives = 194/346 (56%), Gaps = 12/346 (3%)
Query: 56 SSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS 115
+SRR S V+A + VLI+NT GGHA IG +LAK+LL +GH VTI+ G E
Sbjct: 30 TSRRERSSCLLVRA-----ENVLIINTKGGGHAEIGLHLAKQLLSAGHSVTILNDG-EQG 83
Query: 116 DKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAK 175
KK PFN++ + A VW +P + FDV+ DNNGK+LD +P D K
Sbjct: 84 KLEKKTPFNQYKSLEKA--TVVWSNPTDTATYPLE-KFDVIYDNNGKDLDTCKPAIDHFK 140
Query: 176 SSGVKQFLFISSAGIYKPAD-EPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI 234
+ V ++F++SAG YK EP VEGD K AGHV VE Y+ E + F+P Y+
Sbjct: 141 GN-VAHYVFVASAGAYKTNKIEPALVEGDARKEAAGHVAVENYLVEQDLPYTIFQPLYIY 199
Query: 235 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
G KD +F DR++R RPVPIP G+Q T+++HV D++S+L V AA +N
Sbjct: 200 GPYTGKDYMPFFLDRLLRNRPVPIPAPGIQLTSLSHVEDVASLLA-KVPGNAAAIGQHYN 258
Query: 295 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 354
+ SDR +T DG+ K A AAG+ IVHYDPKA + + FPFR HF A AK L
Sbjct: 259 VASDRYITFDGLVKALADAAGVEANIVHYDPKAVALKKGQGFPFRTEHFIASVDKAKREL 318
Query: 355 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIP 400
GW T + ED+ E Y G + F DDKILE++ +P
Sbjct: 319 GWTPTHKILEDVPGLVEAYKSSGLLDADVDFSTDDKILEAVGHKVP 364
>gi|428317846|ref|YP_007115728.1| NAD-dependent epimerase/dehydratase [Oscillatoria nigro-viridis PCC
7112]
gi|428241526|gb|AFZ07312.1| NAD-dependent epimerase/dehydratase [Oscillatoria nigro-viridis PCC
7112]
Length = 313
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 133/323 (41%), Positives = 183/323 (56%), Gaps = 28/323 (8%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGDPAE 143
GG IG YL K L GHEV + FNR N+ V AG K + GD
Sbjct: 7 GGTRFIGVYLTKILAAQGHEVVL---------------FNRGNKPVPVAGVKQIQGDRTN 51
Query: 144 VGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
V + + V FD V DNNG+ L +P+A+ K V+ F+++SSAG+Y +D+ PH+
Sbjct: 52 VEQLQEKLSTVEFDAVFDNNGRELSDTKPLAEIFKGR-VQHFVYMSSAGVYLKSDQMPHI 110
Query: 201 EGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP 257
EGD P + H+ + E Y++E+ W S RP Y+ G N D E WFFDRIVR RP+P
Sbjct: 111 EGDATDPKSRHLGKCETENYLAESGLPWTSIRPTYIYGPQNYNDLEAWFFDRIVRDRPIP 170
Query: 258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL- 316
IPG+GM FT + H +DL+ + + N A I+N+ DR VT DG+A+ C QAAG
Sbjct: 171 IPGNGMHFTQLGHCQDLARAMAAVLGNSRAIGQ-IYNVSGDRFVTFDGLARACIQAAGKS 229
Query: 317 --PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EY 373
++IVHYDPK KKAFP R HF+A A L W+ +L L++ F+ +Y
Sbjct: 230 PDAIKIVHYDPKQFDFGKKKAFPMRLQHFFASVNKAVTDLNWQPEFDLVSGLQDSFQNDY 289
Query: 374 VKIGRDKKAMQFEIDDKILESLK 396
V GRDK + F +DD+IL+S++
Sbjct: 290 VVSGRDKAEIDFSVDDEILKSVQ 312
>gi|32307602|gb|AAP79206.1| mRNA binding protein [Bigelowiella natans]
Length = 325
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 130/309 (42%), Positives = 183/309 (59%), Gaps = 6/309 (1%)
Query: 86 GHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVG 145
GH IG++LA +L GH VT++ GD + K K PF+R+ +++ G +GD G
Sbjct: 14 GHGEIGYHLASQLATDGHAVTLL--GDPATKK-DKLPFSRYGDLMGKGVTIKYGDACSPG 70
Query: 146 NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV 205
+ FD V DN K D+ + AD AK GVK + ++SSAG+YKP P E V
Sbjct: 71 TLQELGEFDAVFDNISKGKDSCKVAADKAKEWGVKHYAYVSSAGMYKPGVIFPMSESLPV 130
Query: 206 KPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQ 264
K AG +VE Y++ W+SFRPQY+ G NK D ++FFDRIVR RPVP+ G+G Q
Sbjct: 131 KESAGQKEVEDYLNSLGLPWSSFRPQYIYGPLTNKRDYLDYFFDRIVRGRPVPVAGNGQQ 190
Query: 265 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHY 323
+ H D++SML ++ E A +FN +D+ +T+D + +CA+ AG+P IVHY
Sbjct: 191 LVTLTHAADVASMLGSVLDAGEKAHMKVFNCATDQLITVDDLIHVCAKIAGVPTPRIVHY 250
Query: 324 DPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAM 383
DPK ++ KKAFPFR+ +F+ P AK LGW +L ++LK FE Y +G+ +K M
Sbjct: 251 DPKKVKLE-KKAFPFRDSNFFVAPDRAKAELGWSCQHDLEKELKAYFEGYRALGKTEKDM 309
Query: 384 QFEIDDKIL 392
F IDD IL
Sbjct: 310 SFPIDDTIL 318
>gi|255647281|gb|ACU24107.1| unknown [Glycine max]
Length = 208
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 111/129 (86%), Positives = 120/129 (93%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA 132
EKKKVLIVNTNSGGHA+IGFY AKELLG+GH VTI+TVGDE SDKMKKPPFNRF+EIVSA
Sbjct: 76 EKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGDEGSDKMKKPPFNRFSEIVSA 135
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
GG+TVWG+PA+VG+VVGG FDVVLDNNGK+L VRPV DWAKSSGVKQFLFISSAGIYK
Sbjct: 136 GGRTVWGNPAQVGSVVGGEVFDVVLDNNGKDLGTVRPVIDWAKSSGVKQFLFISSAGIYK 195
Query: 193 PADEPPHVE 201
P DEPPHVE
Sbjct: 196 PTDEPPHVE 204
>gi|334118011|ref|ZP_08492101.1| NAD-dependent epimerase/dehydratase [Microcoleus vaginatus FGP-2]
gi|333459996|gb|EGK88606.1| NAD-dependent epimerase/dehydratase [Microcoleus vaginatus FGP-2]
Length = 313
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 132/323 (40%), Positives = 181/323 (56%), Gaps = 28/323 (8%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGDPAE 143
GG IG YL K L GHEV + FNR N+ V AG K + GD
Sbjct: 7 GGTRFIGVYLTKILAAQGHEVVL---------------FNRGNKPVPVAGVKQIQGDRTN 51
Query: 144 VGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
V + + V FD V DNNG+ L +P+A+ K V+ F+++SSAG+Y +D+ PH+
Sbjct: 52 VEQLQEKLSTVEFDAVFDNNGRELSDTKPLAEIFKGR-VQHFVYMSSAGVYLKSDQMPHI 110
Query: 201 EGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP 257
EGD P + H+ + E Y++ + W S RP Y+ G N D E WFFDRI R RP+P
Sbjct: 111 EGDATDPKSRHLGKCETENYLAASGLPWTSIRPTYIYGPQNYNDLEAWFFDRIARDRPIP 170
Query: 258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL- 316
IPG+GM FT + H +DL+ + + N A I+N+ DR VT DG+A+ C QAAG
Sbjct: 171 IPGNGMHFTQLGHCQDLAKAMAAVLGNSRAIGQ-IYNVSGDRFVTFDGLARACIQAAGKS 229
Query: 317 --PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EY 373
++IVHYDPK KKAFP R HF+A A L W+ +L LK+ F+ +Y
Sbjct: 230 PDAIKIVHYDPKQFDFGKKKAFPMRLQHFFASVNKAVTDLNWQPEFDLLSGLKDSFQNDY 289
Query: 374 VKIGRDKKAMQFEIDDKILESLK 396
V GRDK + F +DD+IL+S++
Sbjct: 290 VVSGRDKAEIDFSVDDEILKSVQ 312
>gi|170078373|ref|YP_001735011.1| NAD dependent epimerase/dehydratase family protein [Synechococcus
sp. PCC 7002]
gi|169886042|gb|ACA99755.1| NAD dependent epimerase/dehydratase family protein [Synechococcus
sp. PCC 7002]
Length = 310
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 129/327 (39%), Positives = 186/327 (56%), Gaps = 31/327 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL + LL +GHEV + FNR N G
Sbjct: 2 RILII----GGTRFIGVYLTQVLLAAGHEVVL---------------FNRGNHPAPMGVG 42
Query: 136 TVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
+ GD PA++ + G TFD + DNNG+ L +P+A+ + VK F+++SSAG+Y
Sbjct: 43 QIIGDRQEPAQLKEKLAGETFDAIFDNNGRELAHTQPLAE-IFAGKVKHFVYVSSAGVYL 101
Query: 193 PADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
P D+PPH E D V P++ H + E Y++++ W S RP Y+ G+ N D E WFFDR
Sbjct: 102 PTDQPPHKEADPVDPNSRHKGKHETEAYLAQSDLPWTSIRPTYIYGAKNYNDLEAWFFDR 161
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
IVR RP+PIPG G T HV DL++ + ++NP+A I+N+ DR VT G+AK
Sbjct: 162 IVRDRPIPIPGDGQLITQFGHVYDLATAMAAVLDNPKAIGQ-IYNISGDRFVTFTGLAKA 220
Query: 310 CAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDL 366
CA AAG + +V+Y+PK + +KAFP R HF A+ A + L W+ +L L
Sbjct: 221 CAVAAGKDPDTLALVYYNPKQFDLGKRKAFPIRAQHFMADINKALNDLDWQPKYDLVSGL 280
Query: 367 KERFE-EYVKIGRDKKAMQFEIDDKIL 392
K+ F+ +Y+ GRDK + F +DD+IL
Sbjct: 281 KDSFQNDYLANGRDKVDLDFSLDDQIL 307
>gi|427731981|ref|YP_007078218.1| nucleoside-diphosphate-sugar epimerase [Nostoc sp. PCC 7524]
gi|427367900|gb|AFY50621.1| nucleoside-diphosphate-sugar epimerase [Nostoc sp. PCC 7524]
Length = 312
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 188/326 (57%), Gaps = 23/326 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL + L+ GHEV + G+ P +I+ G +
Sbjct: 2 RILIM----GGTRFIGVYLTQILVEQGHEVVLFNRGNR-----PLPNLQGVGQII--GDR 50
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T DP ++ + FDV+ DNNG+ L +P+A+ + V+ F+++SSAG+Y +D
Sbjct: 51 T---DPTQLKEKLLQENFDVIFDNNGRELSDTQPLAEIFQGR-VQHFIYMSSAGVYLKSD 106
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PHVEGD V P + H + E Y+ + + S RP Y+ G N D E WFFDRIVR
Sbjct: 107 QLPHVEGDTVDPKSRHKGKHETEAYLQQQGLPFTSIRPTYIYGPMNYNDLESWFFDRIVR 166
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG+G+ T + HV+DL++ ++ + N +A I+N+ DR VT DG+A+ CAQ
Sbjct: 167 DRPIPIPGNGLHITQLGHVQDLATAMSQVIGNKQAIGQ-IYNISGDRFVTFDGLARACAQ 225
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
AAG ++IVHYDPK +KAFP R HF+A A+ L W+ +L L +
Sbjct: 226 AAGKSPDAIKIVHYDPKKFDFGKRKAFPMRVQHFFASVDKAQTQLNWQPQYDLISGLADS 285
Query: 370 FE-EYVKIGRDKKAMQFEIDDKILES 394
FE +Y+ GRDK + F +D++IL++
Sbjct: 286 FEKDYLATGRDKTEIDFSVDEEILQA 311
>gi|427710298|ref|YP_007052675.1| NAD-dependent epimerase/dehydratase [Nostoc sp. PCC 7107]
gi|427362803|gb|AFY45525.1| NAD-dependent epimerase/dehydratase [Nostoc sp. PCC 7107]
Length = 310
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 125/329 (37%), Positives = 190/329 (57%), Gaps = 31/329 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL + LL GHEV + FNR N V +G
Sbjct: 2 RILIM----GGTRFIGVYLTQILLEQGHEVVL---------------FNRGNRSVPSGVG 42
Query: 136 TVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
+ GD A++ + FD++ DNNG+ L +P+A+ + V+QF+++SSAG+Y
Sbjct: 43 QIIGDRTDAAQLKEKLSQENFDIIFDNNGRELSDTQPLAEIFQGR-VQQFIYMSSAGVYL 101
Query: 193 PADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
+D+ PHVEGD V P + H + E Y++E + S RP Y+ G N + E WFFDR
Sbjct: 102 KSDQLPHVEGDAVDPKSRHKGKHETEAYLAEKGLPFTSIRPTYIYGPSNYNELEGWFFDR 161
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
+VR RP+PIPG+G+ T + HV+DL++ ++L + N + A I+N+ DR VT DG+A+
Sbjct: 162 VVRDRPIPIPGNGLHITQLGHVQDLATAMSLVIGN-QKAIGQIYNISGDRFVTFDGLARA 220
Query: 310 CAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDL 366
CA AAG ++IVHYDPK +KAFP R HF+A + A+ L W+ +L L
Sbjct: 221 CAVAAGKSPDAIKIVHYDPKKFDFGKRKAFPMRVQHFFASVQKAQTELNWQPEYDLISGL 280
Query: 367 KERF-EEYVKIGRDKKAMQFEIDDKILES 394
+ +++ GRDKK + F +D++IL++
Sbjct: 281 TDSLNNDFLASGRDKKEVDFSVDEEILQT 309
>gi|428203489|ref|YP_007082078.1| nucleoside-diphosphate-sugar epimerase [Pleurocapsa sp. PCC 7327]
gi|427980921|gb|AFY78521.1| nucleoside-diphosphate-sugar epimerase [Pleurocapsa sp. PCC 7327]
Length = 342
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 126/332 (37%), Positives = 187/332 (56%), Gaps = 30/332 (9%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
K ++LI+ GG IG YL K L+ GHEV + G+ N AG
Sbjct: 31 KMRILIM----GGTRFIGVYLTKILVERGHEVVLFNRGN--------------NPAPVAG 72
Query: 134 GKTVWGDPAEVGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
K + GD +V + + +FD + DNNG+ L +P+A+ K +K F+++SSAG+
Sbjct: 73 VKQIQGDRTDVAQLKEKLASESFDAIFDNNGRELSDTQPLAEIFKDK-IKHFVYVSSAGV 131
Query: 191 YKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
Y +D+ PH+EGD V P + H Q E Y+++ W S RP Y+ G N D E WFF
Sbjct: 132 YLKSDQMPHLEGDPVDPKSRHQGKFQTESYLAQAGLPWTSIRPTYIYGPQNYNDLEAWFF 191
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
DRIVR RP+PIPG+G+ T HV+DL+S + + N E A I+N+ DR VT +G+A
Sbjct: 192 DRIVRDRPIPIPGNGLHITQFGHVKDLASAMAAVLGN-ERAIGEIYNISGDRYVTFEGLA 250
Query: 308 KLCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPE 364
+ CA AAG +++VHYDPK +KAFP R HF+A+ A + L W+ +L
Sbjct: 251 RTCAAAAGKSPDDLKLVHYDPKKFDFGKRKAFPIRVQHFFADVHKAIEHLDWKPEYDLLS 310
Query: 365 DLKERFE-EYVKIGRDKKAMQFEIDDKILESL 395
LK+ F+ +Y+ GR + + F +D++IL ++
Sbjct: 311 GLKDSFQNDYLASGRHQAEIDFSVDEEILAAV 342
>gi|172038692|ref|YP_001805193.1| mRNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354553970|ref|ZP_08973275.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. ATCC 51472]
gi|171700146|gb|ACB53127.1| mRNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353553649|gb|EHC23040.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. ATCC 51472]
Length = 311
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/328 (38%), Positives = 183/328 (55%), Gaps = 32/328 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL KEL+ GHEV + FNR N+ G
Sbjct: 2 RILIM----GGTRFIGVYLTKELVKQGHEVVL---------------FNRGNKAAPIEGI 42
Query: 136 T-VWGDPAEVGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
T + GD + + + +FD + DNNG+ L +P+ + + VK F+++SSAG+Y
Sbjct: 43 TQIHGDRKDANQLKEKLASESFDAIFDNNGRELSDTQPLVEIFNNK-VKHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ PH+EGD V P++ H + E Y+ ++ W S RP Y+ G N D E WFFD
Sbjct: 102 LKSDQMPHIEGDEVDPNSRHKGKFETESYLGKSGIPWTSIRPTYIYGPQNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RIVR RP+PIPG+G+ FT H++DL+ + + N E A I+N+ +R VT DG+AK
Sbjct: 162 RIVRNRPIPIPGNGLNFTQFGHIQDLAKGMAAVLGN-EQAIGQIYNISGERYVTFDGLAK 220
Query: 309 LCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
CA AAG ++IVHYDPK KK FP R HF+A+ A L W+ +L
Sbjct: 221 ACAVAAGKSADDIKIVHYDPKQFDFGKKKVFPLRMQHFFADIHKALQELDWKPEYDLING 280
Query: 366 LKERFE-EYVKIGRDKKAMQFEIDDKIL 392
LK+ FE +Y+ RD+ + F +D++IL
Sbjct: 281 LKDSFENDYLASKRDQADIDFSLDEQIL 308
>gi|452822421|gb|EME29440.1| mRNA binding / poly(U) binding protein [Galdieria sulphuraria]
Length = 383
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 120/322 (37%), Positives = 191/322 (59%), Gaps = 8/322 (2%)
Query: 78 LIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT 136
+I+NT SGGHA +G+YLA LL +VT+ G E + +P F+ ++E+ + G T
Sbjct: 61 IILNTKSGGHAFVGYYLAHALLQQKQVQVTLWNEGSEAQLRSSQP-FSHYSELKTLGINT 119
Query: 137 VWGDPAEVGNVVGGV-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
++G A ++ G V D ++DN K+++ +P+ + A GV+ +LF+SSAGIYK ++
Sbjct: 120 IFGQSA-TESLEGKVRKCDWIIDNFSKDVETTKPLVELASQIGVRHYLFVSSAGIYKASE 178
Query: 196 EPPHVEGDVVKPDAGHVQVEKYI-SENFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRK 253
PH E D V DA Q E+++ S+ FRP Y+IG + K ++FFDRI+R
Sbjct: 179 MTPHFENDPVNSDAAISQTERFLLSQTSFAVTCFRPIYLIGLKSAKTSYTDYFFDRIIRG 238
Query: 254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 313
VPIP G Q +++HV DL M+ L+++ +A IFN S + +T+ +A+LC+Q
Sbjct: 239 LKVPIPYPGDQLVSLSHVDDLVQMIILSIDKSDAFQ-EIFNATSGKFITVRALAELCSQV 297
Query: 314 AGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 373
P++ +YD A ++ FPFRN HF A+PR A+ +LGW S TNL E++ + F EY
Sbjct: 298 CCKPLQTFYYDAGLAS-NSFSRFPFRNRHFIADPRKAEQLLGWSSHTNLEENIAQMFSEY 356
Query: 374 VKIGRDKKAMQFEIDDKILESL 395
+ + +DK+ + D K+ E +
Sbjct: 357 LSLQKDKQNFPLDEDHKLWEVM 378
>gi|427724408|ref|YP_007071685.1| NAD-dependent epimerase/dehydratase [Leptolyngbya sp. PCC 7376]
gi|427356128|gb|AFY38851.1| NAD-dependent epimerase/dehydratase [Leptolyngbya sp. PCC 7376]
Length = 309
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/327 (39%), Positives = 178/327 (54%), Gaps = 31/327 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL + LL +GHEV + FNR N G
Sbjct: 2 RILII----GGTRFIGVYLTQILLEAGHEVVL---------------FNRGNHPAPEGVT 42
Query: 136 TVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
+ GD PA++ + G +FD V DNNG+ L +P+A+ + +K F+++SSAG+Y
Sbjct: 43 QIQGDRKDPAQLKEKLAGESFDAVFDNNGRELAHTQPLAE-IFAGKIKHFVYVSSAGVYL 101
Query: 193 PADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
P +PP E D V P++ H + E Y++ + W S RP Y+ GS N D E WFFDR
Sbjct: 102 PTTQPPLKEADAVDPNSRHKGKHETEAYLAASDLPWTSIRPTYIYGSKNYNDLEAWFFDR 161
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
IVR RP+PIPG+G T H DL++ + + N E A I+N+ DR VT G+AK
Sbjct: 162 IVRNRPIPIPGNGQFITQFGHCYDLATAMAAILGN-EKAIGQIYNISGDRFVTFTGLAKA 220
Query: 310 CAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDL 366
CA+AAG VE+++YDP +KAFP R+ HF A+ A L W +L L
Sbjct: 221 CAEAAGKNPDDVELIYYDPTEFSFGKRKAFPIRSQHFMADISKALKALDWAPKYDLISGL 280
Query: 367 KERF-EEYVKIGRDKKAMQFEIDDKIL 392
KE F +Y+ GRDK + F DD+IL
Sbjct: 281 KESFINDYLASGRDKTDIDFSTDDQIL 307
>gi|75908322|ref|YP_322618.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Anabaena variabilis
ATCC 29413]
gi|75702047|gb|ABA21723.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Anabaena variabilis
ATCC 29413]
Length = 313
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/326 (37%), Positives = 185/326 (56%), Gaps = 23/326 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL + L+ GHEV + G+ P +I+ G +
Sbjct: 2 RILIM----GGTRFIGVYLTQILVEQGHEVVLFNRGNR-----PLPALQGVGQII--GDR 50
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T D ++ + FDVV DNNG+ L +P+A+ + V+ F+++SSAG+Y +D
Sbjct: 51 T---DATQLKEKLSAENFDVVFDNNGRELTDTQPLAEIFQDR-VQHFVYMSSAGVYLKSD 106
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH+EGD V P + H + E Y+ + + S RP Y+ G N D E WFFDRIVR
Sbjct: 107 QLPHIEGDKVDPKSRHKGKHETEAYLQQTGLPFTSIRPTYIYGPRNYNDLESWFFDRIVR 166
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG+G+ T + HV+DL+ ++ + N +A ++N+ DR VT DG+A+ CAQ
Sbjct: 167 DRPLPIPGNGLHITQLGHVKDLAMAMSQVIGNKQAIGQ-VYNISGDRYVTFDGLARACAQ 225
Query: 313 AAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
A G ++IVHYDPK +KAFP R HF+A A+ L W+ +L L +
Sbjct: 226 ALGKSADDIKIVHYDPKKFDFGKRKAFPMRVQHFFASVNKAQTELNWQPQYDLISGLADA 285
Query: 370 FE-EYVKIGRDKKAMQFEIDDKILES 394
+E +YV GRDK + F +D++IL++
Sbjct: 286 YENDYVASGRDKSEIDFSVDEEILKA 311
>gi|428304521|ref|YP_007141346.1| NAD-dependent epimerase/dehydratase [Crinalium epipsammum PCC 9333]
gi|428246056|gb|AFZ11836.1| NAD-dependent epimerase/dehydratase [Crinalium epipsammum PCC 9333]
Length = 313
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/323 (38%), Positives = 184/323 (56%), Gaps = 24/323 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG L K L+ GHEV + G+ K P +I G +
Sbjct: 2 RILIM----GGTRFIGVSLTKILVEQGHEVVLFNRGN------KPAPVEGVQQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T D +++ + + FD + DNNG+ L +P+A+ + V+ F+++SSAG+Y +D
Sbjct: 50 T---DASQLKDKLSSEKFDAIFDNNGRELSDTQPLAEIFQDK-VQHFVYMSSAGVYLKSD 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH+EGD V P + H + E Y++E+ + S RP Y+ G+ N D E WFFDRIVR
Sbjct: 106 QMPHIEGDAVDPKSRHKGKHETETYLTESGLPFTSIRPTYIYGAQNYNDLEAWFFDRIVR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG+GM T HV+DL+S + L + N +A I+N+ DR VT DG+A+ CA
Sbjct: 166 DRPIPIPGNGMHITQFGHVKDLASAMALVLGNSQAVGQ-IYNVSGDRFVTFDGLARACAV 224
Query: 313 AAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
AAG ++I+HYDPK +KAFP R HF+A AK L W+ +L LK+
Sbjct: 225 AAGKSPDNLQIIHYDPKKFDFGKRKAFPMRVQHFFASVNKAKTQLNWQPEFDLISGLKDS 284
Query: 370 FE-EYVKIGRDKKAMQFEIDDKI 391
F+ +++ RD+ + F DD+I
Sbjct: 285 FQNDFIASNRDQSEIDFSTDDQI 307
>gi|428311078|ref|YP_007122055.1| nucleoside-diphosphate-sugar epimerase [Microcoleus sp. PCC 7113]
gi|428252690|gb|AFZ18649.1| nucleoside-diphosphate-sugar epimerase [Microcoleus sp. PCC 7113]
Length = 311
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/328 (38%), Positives = 185/328 (56%), Gaps = 26/328 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP-PFNRFNEIVSAGG 134
++LI+ GG IG YL K L+ GH+V + G KKP P +I G
Sbjct: 2 RILIM----GGTRFIGVYLTKLLVEQGHDVVLFNRG-------KKPAPVEGIQQI--HGD 48
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+T D +++ N + FD + DNNG+ L +P+A+ K VK F+++SSAG+Y +
Sbjct: 49 RT---DASQLKNKLSQEQFDAIFDNNGRELSDTQPLAEIFKDR-VKHFVYMSSAGVYLKS 104
Query: 195 DEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV 251
D+ PH+EGD V P + H + E ++++ W S RP Y+ G N D E WFFDRIV
Sbjct: 105 DQLPHIEGDPVDPKSRHKGKHETEAFLAQLGLPWTSIRPTYIYGPQNYNDLEAWFFDRIV 164
Query: 252 RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 311
R RP+PIPG+GM T H +DL+ + + N + A I+N+ DR VT DG+A+ CA
Sbjct: 165 RDRPIPIPGNGMHITQFGHCKDLARAMAQVLGN-DRAIGQIYNVSGDRYVTFDGLARACA 223
Query: 312 QAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 368
QAAG ++I+HYDPK +KAFP R HF+A+ A L W+ +L LK+
Sbjct: 224 QAAGKSADSIKIMHYDPKKFDFGKRKAFPMRVQHFFADVNKAMTQLNWQPEYDLISGLKD 283
Query: 369 RFE-EYVKIGRDKKAMQFEIDDKILESL 395
F+ +Y GR + + F +DD+IL+ +
Sbjct: 284 SFQNDYQASGRHESEVDFSLDDEILKGI 311
>gi|434405569|ref|YP_007148454.1| nucleoside-diphosphate-sugar epimerase [Cylindrospermum stagnale
PCC 7417]
gi|428259824|gb|AFZ25774.1| nucleoside-diphosphate-sugar epimerase [Cylindrospermum stagnale
PCC 7417]
Length = 312
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 187/327 (57%), Gaps = 23/327 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL ++L+ +GHEV + G+ + P +I+ G +
Sbjct: 2 RILII----GGTRFIGVYLTQQLVEAGHEVVLFNRGNRPA-----PSLQGVGQII--GDR 50
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T D + + TFDV+ DNNG+ L +P+A+ + V+ F+++SSAG+Y +D
Sbjct: 51 T---DATVLKAKLAQETFDVIFDNNGRELTDTQPLAEIFQGR-VQHFVYMSSAGVYLKSD 106
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PHVEGD V P + H + E Y+++ + S RP Y+ G N + E WFFDRIVR
Sbjct: 107 QLPHVEGDTVDPQSRHKGKHETEAYLTQQGLPFTSIRPTYIYGPRNYNELESWFFDRIVR 166
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+ IPG+GM T + HV+DL+ +T V N +A I+N+ DR VT DG+A+ CA
Sbjct: 167 DRPLAIPGNGMHITQLGHVKDLAKAMTQVVGNKKAIGQ-IYNISGDRFVTFDGLARACAV 225
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
AAG V+IVHYDPK +KAFP R HF+A A+ L W+ +L L +
Sbjct: 226 AAGKSPDAVKIVHYDPKKFDFGKRKAFPMRVQHFFASVNKAQIELNWQPEYDLISGLNDS 285
Query: 370 FE-EYVKIGRDKKAMQFEIDDKILESL 395
E +Y+ GRDK + F +D++IL ++
Sbjct: 286 LENDYLASGRDKAEVDFSLDEEILNAV 312
>gi|257059864|ref|YP_003137752.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 8802]
gi|256590030|gb|ACV00917.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 8802]
Length = 309
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/328 (38%), Positives = 182/328 (55%), Gaps = 32/328 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG- 134
++LI+ GG IG YL K L+ GHEV + FNR N+ V G
Sbjct: 2 RILIM----GGTRFIGVYLTKVLVEQGHEVVL---------------FNRGNKPVPVEGV 42
Query: 135 KTVWGDPAEVGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD + + + FD V DNNG+ L +P+ + + V+ F+++SSAG+Y
Sbjct: 43 QQIKGDRTNISQLKETLSSEQFDAVFDNNGRELSDTQPLVEIFLNK-VEHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+ + PH+EGD V P++ H + E Y+ ++ W S RP Y+ G N D E WFFD
Sbjct: 102 LKSHQMPHIEGDAVDPNSRHKGKFETESYLEKSGIPWTSIRPTYIYGPQNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RIVR RP+PIPG+G+ FT HV+DL+ + + N +A + I+N+ +R VT DG+A
Sbjct: 162 RIVRNRPLPIPGNGLHFTQFGHVQDLAKAMASVLGNKQAINQ-IYNISGERYVTFDGLAY 220
Query: 309 LCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
CA AAG ++IVHYDPK KKAFP R HF+A+ A L W +L
Sbjct: 221 ACAIAAGKSPDDIKIVHYDPKQFDFGKKKAFPLRTQHFFADIHKALKDLDWTPEYDLIGG 280
Query: 366 LKERFE-EYVKIGRDKKAMQFEIDDKIL 392
LK+ FE +Y+ GRDK + F +DD+IL
Sbjct: 281 LKDSFENDYLASGRDKIEVDFSVDDQIL 308
>gi|409994115|ref|ZP_11277235.1| NAD-dependent epimerase/dehydratase [Arthrospira platensis str.
Paraca]
gi|291570466|dbj|BAI92738.1| mRNA-binding protein [Arthrospira platensis NIES-39]
gi|409935028|gb|EKN76572.1| NAD-dependent epimerase/dehydratase [Arthrospira platensis str.
Paraca]
Length = 311
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/325 (37%), Positives = 183/325 (56%), Gaps = 23/325 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL K L+ GHEV + G++ S P +I G +
Sbjct: 2 RILIM----GGTRFIGVYLTKILVSQGHEVVLFNRGNKPS------PVEGIKQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T D ++ + G TFDV+ DNNG+ L +P+AD VK F+++SSAG+Y +D
Sbjct: 50 T---DSQQLQEKLSGETFDVIFDNNGRQLSDTQPLADLFNGQ-VKHFVYMSSAGVYLKSD 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH+EGD P + H+ + E Y+ + W S RP Y+ G N E WFFDRIV
Sbjct: 106 QMPHIEGDPTDPKSRHLGKYETETYLQKVGIPWTSIRPTYIYGPQNYNPLESWFFDRIVA 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
KRP+P+PG+GM T + HV DL++ + +AV + A I+N+ DR VT DG+AK CA
Sbjct: 166 KRPIPVPGNGMHITQLGHVEDLANAM-VAVLGNQTAIGQIYNISGDRFVTFDGLAKACAI 224
Query: 313 AAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
AAG ++++HYDPK +KAFP R HF+A+ A + L W+ +L LK+
Sbjct: 225 AAGQSPDDLQLIHYDPKKFDFGKRKAFPLRVQHFFADVHKAINQLNWQPKYDLISGLKDS 284
Query: 370 FEEYVKIGRDKKAMQFEIDDKILES 394
F+ I ++ + F DD+I+++
Sbjct: 285 FQNDYIINSNQGEVDFSTDDEIIKA 309
>gi|113478014|ref|YP_724075.1| NAD-dependent epimerase/dehydratase [Trichodesmium erythraeum
IMS101]
gi|110169062|gb|ABG53602.1| NAD-dependent epimerase/dehydratase [Trichodesmium erythraeum
IMS101]
Length = 310
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 122/329 (37%), Positives = 183/329 (55%), Gaps = 32/329 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG- 134
++LI+ GG IG YL K L+ GHEV + FNR N+ G
Sbjct: 2 RILIM----GGTRFIGVYLTKILVEKGHEVVL---------------FNRGNKPAPVSGI 42
Query: 135 KTVWGDPAEVGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
K ++GD ++ + + FD + DNNG+ L +P+A+ K VK F+++SSAG+Y
Sbjct: 43 KEIYGDRTDINQLKEKLASEKFDAIFDNNGRKLSDTKPLAEIFKGQ-VKHFVYMSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ PH+EGD + P + H+ + E ++ W S RP Y+ G N D E WFFD
Sbjct: 102 LKSDQMPHIEGDTIDPKSRHLGKYETETELANQGLPWTSIRPTYIYGPQNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RIVR RP+PIPG+G+ T + HV+DL +M + + + A I+N+ +R +T DG+A+
Sbjct: 162 RIVRDRPIPIPGNGLHITQLGHVKDL-AMAMVNILGNDKAIGQIYNISGERFITFDGLAR 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
CA+A G +++VHYDPK KKAFP R HF+A A L W+ +L
Sbjct: 221 SCAEATGKSPDSIKLVHYDPKKFDFGKKKAFPLRMQHFFASINKAITELNWQPKYDLISG 280
Query: 366 LKERFE-EYVKIGRDKKAMQFEIDDKILE 393
LK+ FE +++ GR + + F IDD+IL+
Sbjct: 281 LKDSFENDFIASGRAQAEVDFSIDDEILK 309
>gi|440681226|ref|YP_007156021.1| NAD-dependent epimerase/dehydratase [Anabaena cylindrica PCC 7122]
gi|428678345|gb|AFZ57111.1| NAD-dependent epimerase/dehydratase [Anabaena cylindrica PCC 7122]
Length = 310
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 188/327 (57%), Gaps = 25/327 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++L++ GG IG YL + L+ +GHEV + G+ P +I+ G +
Sbjct: 2 RILVI----GGTRFIGVYLTQLLVEAGHEVVLFNRGN-------FPAPEAVGQII--GDR 48
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T DP+++ + FDV+ DNNG+ L +P+A+ + V+ F+++SSAG+Y +D
Sbjct: 49 T---DPSQLKAKLSQENFDVIFDNNGRELTDTQPLAEIF-AGRVQHFVYMSSAGVYLKSD 104
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH+EGD V P + H + E Y+ ++ + S RP Y+ G N + E WFFDRIVR
Sbjct: 105 QMPHIEGDAVDPKSRHKGKHETEAYLQQSGIPFTSIRPTYIYGPKNYNELEGWFFDRIVR 164
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG+GM T + HV+DL+ ++ + N + A I+N+ DR VT DG+A+ CA
Sbjct: 165 DRPIPIPGNGMHLTQLGHVQDLAQAMSQVIGN-QKAIQQIYNISGDRFVTFDGLARACAV 223
Query: 313 AAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
AAG V+IVHYDPK +KAFP R HF+A A L W+ +L LK+
Sbjct: 224 AAGKSPDDVKIVHYDPKKFDFGKRKAFPMRVQHFFASVNKAMTELNWQPEYDLISGLKDS 283
Query: 370 FE-EYVKIGRDKKAMQFEIDDKILESL 395
E +Y+ GRDK F +DD+IL+++
Sbjct: 284 LESDYLASGRDKIEKDFSVDDEILKAV 310
>gi|300868027|ref|ZP_07112665.1| NAD-dependent epimerase/dehydratase [Oscillatoria sp. PCC 6506]
gi|300333947|emb|CBN57843.1| NAD-dependent epimerase/dehydratase [Oscillatoria sp. PCC 6506]
Length = 312
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 127/319 (39%), Positives = 183/319 (57%), Gaps = 21/319 (6%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP-PFNRFNEIVSAGGKTVWGDPAE 143
GG IG YL K L+ GHEV + G KKP P + +I G +T D ++
Sbjct: 7 GGTRFIGVYLTKILVAQGHEVVLFNRG-------KKPAPVDGVQQI--HGDRT---DASQ 54
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD 203
+ + FD + DNNG+ L +P+A+ K+ VK F+++SSAG+Y +D+ PH+EGD
Sbjct: 55 LKEKLSSEKFDAIFDNNGRELSDTQPLAEIFKNQ-VKHFVYMSSAGVYLKSDQLPHIEGD 113
Query: 204 VVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPG 260
P + H+ + E Y+ + W S RP Y+ G N D E WFFDRIVR RP+PIPG
Sbjct: 114 ATDPKSRHLGKYETETYLKDAGLPWTSIRPTYIYGPQNYNDLEAWFFDRIVRDRPIPIPG 173
Query: 261 SGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG--LPV 318
+GM T + H +DL+ + + N E A I+N+ DR VT DG+A+ CA AAG +
Sbjct: 174 NGMHITQLGHCQDLAKAMAAVLGN-EKAIGQIYNVSGDRYVTFDGLARACAAAAGKSTDI 232
Query: 319 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIG 377
+IVHYDPK +KAFP R HF+A A L W+ +L LK+ F+ +Y+ G
Sbjct: 233 KIVHYDPKKFDFGKRKAFPMRVQHFFASVNKAMSELNWQPEFDLVSGLKDSFQNDYLTSG 292
Query: 378 RDKKAMQFEIDDKILESLK 396
RDK + F +DD+IL++++
Sbjct: 293 RDKAEIDFSVDDEILQAVQ 311
>gi|443315917|ref|ZP_21045385.1| nucleoside-diphosphate-sugar epimerase [Leptolyngbya sp. PCC 6406]
gi|442784490|gb|ELR94362.1| nucleoside-diphosphate-sugar epimerase [Leptolyngbya sp. PCC 6406]
Length = 311
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 120/317 (37%), Positives = 175/317 (55%), Gaps = 20/317 (6%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG YL + L+ GHEV ++ G+ K P + +I T A V
Sbjct: 7 GGTRFIGVYLTRLLVEQGHEVVLLNRGN------KPAPVSGVAQIHCDRKDTTALKTALV 60
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
G FD + DNNG+ +P+ + V+ +++SSAG+Y +D+ PHVEGD
Sbjct: 61 GQ-----NFDAIFDNNGREQSDTQPLVELFGDQ-VQHLIYVSSAGVYLKSDQMPHVEGDA 114
Query: 205 VKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS 261
V P++ H + E Y++ + + RP Y+ G N D E WFFDR+VR RP+PIPG
Sbjct: 115 VDPNSRHKGKFETEAYLAAQGVPFTAIRPVYIYGPQNYNDLEAWFFDRLVRDRPIPIPGD 174
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG---LPV 318
GM T + HV+DL++ + + NP A +N+ DRAVT DG+A+ CA AAG +
Sbjct: 175 GMALTQLGHVQDLAAAMAAVLSNPRAVGQT-YNISGDRAVTFDGLARACAIAAGKDPQAL 233
Query: 319 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIG 377
++VHYDPK +KAFP R HF+ AK LGW+ NL LK+ FE +Y+ G
Sbjct: 234 DLVHYDPKQFDFGKRKAFPMRVQHFFTAIDRAKADLGWQPQFNLVNGLKDAFEKDYLVSG 293
Query: 378 RDKKAMQFEIDDKILES 394
R ++ + F++DD+IL +
Sbjct: 294 RHQQTIDFDLDDQILAA 310
>gi|354564877|ref|ZP_08984053.1| NAD-dependent epimerase/dehydratase [Fischerella sp. JSC-11]
gi|353550003|gb|EHC19442.1| NAD-dependent epimerase/dehydratase [Fischerella sp. JSC-11]
Length = 311
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 122/327 (37%), Positives = 185/327 (56%), Gaps = 24/327 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LIV GG IG YL + L+ GHEV + G+ + P +I G +
Sbjct: 2 RILIV----GGTRFIGVYLTQLLVQQGHEVVLFNRGN------RPLPVEGIGQI--TGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T D ++ + FD + DNNG+ L +P+A+ + V+ F+++SSAG+Y +D
Sbjct: 50 T---DATQLKEKLSKENFDAIFDNNGRELTDTQPLAEIFQDR-VQNFIYMSSAGVYLKSD 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH+EGD V P + H + E Y+ + + S RP Y+ G N D E WFFDRIVR
Sbjct: 106 QMPHIEGDAVDPKSRHKGKHETEAYLIQQGIPFTSIRPTYIYGPKNYNDLEAWFFDRIVR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG+G+ T + HV+DL++ +T + N +A I+N+ DR VT DG+A+ CA
Sbjct: 166 DRPIPIPGNGLHITQLGHVKDLATAMTKVLGNSQALRQ-IYNVSGDRFVTFDGLARACAV 224
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
AAG ++IVHYDPK +KAFP R HF+A A L W+ +L L++
Sbjct: 225 AAGKSPDEIKIVHYDPKKFDFGKRKAFPLRIQHFFASVNKAMTELDWQPEYDLISGLQDS 284
Query: 370 F-EEYVKIGRDKKAMQFEIDDKILESL 395
F +Y+ GRDK + F +D++IL+++
Sbjct: 285 FGNDYLVSGRDKAEIDFSVDEEILQTI 311
>gi|119512443|ref|ZP_01631525.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Nodularia spumigena
CCY9414]
gi|119462909|gb|EAW43864.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Nodularia spumigena
CCY9414]
Length = 312
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/332 (37%), Positives = 184/332 (55%), Gaps = 33/332 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA--G 133
++LI+ GG IG YL + L+ GHEV + FNR N V G
Sbjct: 2 RILIM----GGTRFIGVYLTQLLVEQGHEVVL---------------FNRGNRPVPHLPG 42
Query: 134 GKTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ GD ++ + FDV+ DNNG+ L +P+A+ + V+ F+++SSAG+
Sbjct: 43 VGQIIGDRTNATQLKEKLSSEKFDVIFDNNGRELTDTQPLAEIFQDQ-VQHFVYMSSAGV 101
Query: 191 YKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
Y +D+ PH+EGD V P + H + E Y+ + S RP Y+ G N D E WFF
Sbjct: 102 YLKSDQLPHIEGDTVDPKSRHRGKHETEAYLMQQNLPVTSIRPTYIYGPQNYNDLESWFF 161
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
DRIVR RP+PIPG+G+ T + HV+DL++ ++ + N +A I+N+ DR VT DG+A
Sbjct: 162 DRIVRDRPIPIPGNGLHITQLGHVKDLATAMSQVIGNSQAIRQ-IYNISGDRFVTFDGLA 220
Query: 308 KLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPE 364
+ CA AAG V+IVHYDPK +KAFP R HF+A A L W+ +L
Sbjct: 221 RACAVAAGKSPDAVKIVHYDPKKFDFGKRKAFPMRVQHFFASVNKAMTELAWQPEYDLIS 280
Query: 365 DLKERFE-EYVKIGRDKKAMQFEIDDKILESL 395
L + E +Y+K GRDK + F +D++IL+++
Sbjct: 281 GLADSLENDYLKTGRDKAEVDFSMDEEILQAV 312
>gi|17232323|ref|NP_488871.1| mRNA-binding protein [Nostoc sp. PCC 7120]
gi|17133968|dbj|BAB76530.1| mRNA-binding protein [Nostoc sp. PCC 7120]
Length = 311
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/326 (37%), Positives = 184/326 (56%), Gaps = 23/326 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL + L+ GHEV + G+ P +I+ G +
Sbjct: 2 RILIM----GGTRFIGVYLTQILVEQGHEVVLFNRGNR-----PLPALQGVGQII--GDR 50
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T D ++ + FDVV DNNG+ L +P+A+ + V+ F+++SSAG+Y +D
Sbjct: 51 T---DATQLKEKLSAENFDVVFDNNGRELTDTQPLAEIFQDR-VQHFVYMSSAGVYLKSD 106
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH+EGD V P + H + E Y+ + + S RP Y+ G N D E WFFDRIVR
Sbjct: 107 QLPHIEGDKVDPKSRHKGKHETEAYLQQIGLPFTSIRPTYIYGPRNYNDLESWFFDRIVR 166
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIP +G+ T + HV+DL+ ++ + N +A ++N+ DR VT DG+A+ CAQ
Sbjct: 167 DRPLPIPVNGLHITQLGHVKDLAMAMSQVIGNKQAIGQ-VYNISGDRYVTFDGLARACAQ 225
Query: 313 AAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
A G ++IVHYDPK +KAFP R HF+A A+ L W+ +L L +
Sbjct: 226 ALGKSADDLKIVHYDPKKFDFGKRKAFPMRVQHFFASVNKAQTELNWQPQYDLISGLADA 285
Query: 370 FE-EYVKIGRDKKAMQFEIDDKILES 394
+E +YV GRDK + F +DD+IL++
Sbjct: 286 YENDYVASGRDKSEIDFSVDDEILKA 311
>gi|411118862|ref|ZP_11391242.1| nucleoside-diphosphate-sugar epimerase [Oscillatoriales
cyanobacterium JSC-12]
gi|410710725|gb|EKQ68232.1| nucleoside-diphosphate-sugar epimerase [Oscillatoriales
cyanobacterium JSC-12]
Length = 309
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 126/324 (38%), Positives = 181/324 (55%), Gaps = 24/324 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL + L HEV + G+ K P +I G +
Sbjct: 2 RILIM----GGTRFIGVYLTRLLYEKEHEVVLFNRGN------KPTPVEGIAQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T +PA++ + G FD + DNNG+ L +P+A+ K VK F+++SSAG+Y +D
Sbjct: 50 T---NPADLKAKLEGQEFDAIFDNNGRELSDTQPLAELFKDQ-VKHFVYMSSAGVYLKSD 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH+EGD V P++ H E Y++E + S RP Y+ G N D E WFFDRIVR
Sbjct: 106 QMPHIEGDPVDPESRHKGKHDTETYLAEQGLPFTSIRPTYIYGPQNYNDLEAWFFDRIVR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG+GM T HV+DL+ + + N A ++N+ DR VT DG+A+ CA
Sbjct: 166 DRPIPIPGNGMTITQFGHVKDLAQAMVQVLGNRRAVGQ-VYNVSGDRFVTFDGLARACAV 224
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
AAG ++IVHYDPK +KAFP R HF+A + A + L W+ +L LK+
Sbjct: 225 AAGKSPDSLKIVHYDPKQFDFGKRKAFPMRVQHFFASVQKAMNDLYWKPEYDLIAGLKDS 284
Query: 370 FE-EYVKIGRDKKAMQFEIDDKIL 392
FE +Y+ R K + F +DD+IL
Sbjct: 285 FENDYLASERYKAEVDFSLDDQIL 308
>gi|443325612|ref|ZP_21054298.1| nucleoside-diphosphate-sugar epimerase [Xenococcus sp. PCC 7305]
gi|442794771|gb|ELS04172.1| nucleoside-diphosphate-sugar epimerase [Xenococcus sp. PCC 7305]
Length = 312
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 124/322 (38%), Positives = 173/322 (53%), Gaps = 28/322 (8%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGD--- 140
GG IG YL K L+ GHEV + FNR N+ G T + GD
Sbjct: 7 GGTRFIGVYLTKVLVAQGHEVVL---------------FNRGNKPAPVEGVTQIHGDRKD 51
Query: 141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
A++ + G +FDVV DNNG+ L +P+ + + V+ F+++SSAG+Y +D+ PH
Sbjct: 52 AAQLKEKLSGESFDVVFDNNGRELSDTQPLVEIFQGK-VQHFVYVSSAGVYLKSDQMPHR 110
Query: 201 EGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP 257
EGD V P + H Q E Y++ + W S RP Y+ G N D E WFFDRIVR+RP+
Sbjct: 111 EGDAVDPKSRHKGKHQTEAYLAASGIPWTSIRPTYIYGPQNYNDLEAWFFDRIVRERPIL 170
Query: 258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 317
IPG+G T + H++DL + V N E A I+N+ DR VT DG+A+ CA AAG
Sbjct: 171 IPGNGKHLTQLGHIQDLVKAMAAVVGN-EKAVGQIYNISGDRYVTFDGLARACAIAAGKS 229
Query: 318 ---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF-EEY 373
++I+HYDP +KAFP R HF+A A L W+ +L LK+ +Y
Sbjct: 230 PEDIKIIHYDPSQFDFGKRKAFPMRVQHFFASVNKAMQDLDWQPEYDLVAGLKDSLNHDY 289
Query: 374 VKIGRDKKAMQFEIDDKILESL 395
+ GRD + F +D +ILE
Sbjct: 290 LASGRDTAEIDFSLDQQILEKF 311
>gi|218246823|ref|YP_002372194.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 8801]
gi|218167301|gb|ACK66038.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 8801]
Length = 309
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 125/328 (38%), Positives = 180/328 (54%), Gaps = 32/328 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG- 134
++LI+ GG IG YL K L+ GHEV + FNR N+ V G
Sbjct: 2 RILIM----GGTRFIGVYLTKVLVEQGHEVVL---------------FNRGNKPVPVEGV 42
Query: 135 KTVWGDPAEVGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD + + + FD V DNNG+ L +P+ + + V+ F+++SSAG+Y
Sbjct: 43 QQIKGDRTNISQLKETLSSEQFDAVFDNNGRELSDTQPLVEIFLNK-VEHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+ + PH+EGD V P++ H + E Y+ ++ W S RP Y+ G N D E WFFD
Sbjct: 102 LKSHQMPHIEGDAVDPNSRHKGKFETESYLEKSGIPWTSIRPTYIYGPQNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RIVR P+PIPG+G+ FT HV+DL+ + + N +A + I+N+ +R VT DG+A
Sbjct: 162 RIVRDHPLPIPGNGLHFTQFGHVQDLAKAMASVLGNKQAINQ-IYNISGERYVTFDGLAY 220
Query: 309 LCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
CA AAG ++IVHYDPK KKAFP R HF+A+ A L W +L
Sbjct: 221 ACAIAAGKSPDDIKIVHYDPKQFDFGKKKAFPLRTQHFFADIHKALKDLDWTPEYDLIGG 280
Query: 366 LKERFE-EYVKIGRDKKAMQFEIDDKIL 392
LK+ E +Y+ GRDK + F +DD+IL
Sbjct: 281 LKDSLENDYLASGRDKIEVDFSVDDQIL 308
>gi|332708749|ref|ZP_08428720.1| nucleoside-diphosphate-sugar epimerase [Moorea producens 3L]
gi|332352291|gb|EGJ31860.1| nucleoside-diphosphate-sugar epimerase [Moorea producens 3L]
Length = 312
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 122/324 (37%), Positives = 181/324 (55%), Gaps = 24/324 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG +G YL K L+ GHEV + G+ K P +I G +
Sbjct: 2 RILIM----GGTRFVGVYLTKVLVEMGHEVVLFNRGN------KPAPLPGVQQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
DP ++ ++ FD + DNN + L +P+ + K V+ F+++SSAG+Y ++
Sbjct: 50 K---DPNQLKEMLSSQEFDGIFDNNARELSDTQPLVEIFKDR-VQHFVYMSSAGVYLKSE 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH+EGD V P++ H E Y+ E + + RP Y+ G N D E WFFDRIVR
Sbjct: 106 QLPHLEGDPVDPNSRHKGKHHTEAYLQELGVPFTAIRPTYIYGPQNYNDVEAWFFDRIVR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
R +PIPG+GM T + H +DL+ + + NPEA I+N+ +R VT DG+A+ CA
Sbjct: 166 DRTIPIPGNGMHITQLGHCQDLARAMAAVLGNPEAIGK-IYNVSGERYVTFDGLARTCAM 224
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
A G V++VHYDPK +KAFPFR HF+A+ AK L W+ +L LK+
Sbjct: 225 ACGKSASEVKLVHYDPKQFDFGKRKAFPFRLQHFFADIHKAKTELNWQPEYDLLSGLKDS 284
Query: 370 FE-EYVKIGRDKKAMQFEIDDKIL 392
FE +Y+ GRD+ + F +DD+IL
Sbjct: 285 FENDYLASGRDQADVDFAVDDQIL 308
>gi|443321884|ref|ZP_21050923.1| nucleoside-diphosphate-sugar epimerase [Gloeocapsa sp. PCC 73106]
gi|442788428|gb|ELR98122.1| nucleoside-diphosphate-sugar epimerase [Gloeocapsa sp. PCC 73106]
Length = 311
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 124/331 (37%), Positives = 179/331 (54%), Gaps = 32/331 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG- 134
++LI+ GG IG YL K L+ +GHEV + FNR N+ G
Sbjct: 2 RILIM----GGTRFIGVYLTKILVEAGHEVVL---------------FNRGNKPTPLPGV 42
Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
K + GD P + + G FD + DNNG+ L +P+ + + ++ F+++SSAG+Y
Sbjct: 43 KQITGDRLQPEVLKEKLAGEHFDAIFDNNGRELADTQPLVELFQGK-IQHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
P + PH EGD + P + H + E Y++E W S RP Y+ G N D E WFFD
Sbjct: 102 LPTHQLPHREGDAIDPQSRHRGKYETEAYLTEMGLPWTSIRPTYIYGPQNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
R+VR RP+PIPG+G+ T HV DL++ + + N +A I+N+ DR VT DG+A
Sbjct: 162 RLVRDRPLPIPGNGLHLTQFGHVADLATAMASVLGNHKAI-GQIYNISGDRYVTFDGLAY 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
CA A G + +VHY+P+ KAFP R HF A+ A L W +L
Sbjct: 221 ACAAALGKSPDSLSLVHYNPRDFDFGKSKAFPLRVQHFCADIHKATTELDWLPQFDLVSG 280
Query: 366 LKERFEE-YVKIGRDKKAMQFEIDDKILESL 395
LK+ FE+ Y+ GRD++ + F +DDKILES+
Sbjct: 281 LKDSFEQDYLVSGRDRQEIDFSVDDKILESI 311
>gi|434397935|ref|YP_007131939.1| NAD-dependent epimerase/dehydratase [Stanieria cyanosphaera PCC
7437]
gi|428269032|gb|AFZ34973.1| NAD-dependent epimerase/dehydratase [Stanieria cyanosphaera PCC
7437]
Length = 311
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 120/324 (37%), Positives = 181/324 (55%), Gaps = 24/324 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL K L+ GHEV + G+ K P +I G +
Sbjct: 2 RILIM----GGTRFIGVYLTKILVQQGHEVVLFNRGN------KPAPIEGVQQI--QGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
D A + +G +FD V DNNG+ L +P+ + K V+ F+++SSAG+Y ++
Sbjct: 50 K---DTALLKEKLGQTSFDAVFDNNGRELSDTQPLVEIFKDR-VQHFVYVSSAGVYLKSE 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH EGD V P++ H + E Y++++ W S RP Y+ G N D E WFFDRIVR
Sbjct: 106 QMPHREGDPVDPNSRHKGKHETEAYLAQSGIPWTSIRPTYIYGPQNYNDLEAWFFDRIVR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
R + IPG+G+ T HV DL++ + + N +A I+N+ DR VT +G+A CA+
Sbjct: 166 NRSILIPGNGLYLTQFGHVEDLATAMAAVLGNQQAVGQ-IYNISGDRYVTFNGLAYACAE 224
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
AAG +++VHYDP +KAFP R HF+AE AK L W+ +L LK+
Sbjct: 225 AAGKSADEIQLVHYDPSKFNFGKRKAFPMRTQHFFAEINKAKTELNWQPKYDLVSGLKDS 284
Query: 370 FE-EYVKIGRDKKAMQFEIDDKIL 392
F+ +Y+ GR++ + F +D++IL
Sbjct: 285 FQNDYLASGRERSKIDFSVDEEIL 308
>gi|307104182|gb|EFN52437.1| hypothetical protein CHLNCDRAFT_138964 [Chlorella variabilis]
Length = 324
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 136/351 (38%), Positives = 185/351 (52%), Gaps = 47/351 (13%)
Query: 49 SFLACPAS--SRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVT 106
+FL AS R S SA A + K LIVNT GGHA +G +LAK+LL +GH VT
Sbjct: 9 TFLGAAASLQGRTSRQSASRRLAVSVRADKALIVNTKGGGHAFLGLHLAKKLLSAGHSVT 68
Query: 107 IMTVGDENSDKMK-KPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLD 165
I+ GD+ +K+ K PF+++ + AG + VWG P + G FDVV DNNGKNL+
Sbjct: 69 ILNDGDK--EKLSGKAPFSQYASL--AGAEVVWGSPTDPATYPAG-AFDVVYDNNGKNLE 123
Query: 166 AVRPVADWAKSSGVKQFLFISSAGIYKPAD-EPPHVEGDVVKPDAGHVQVEKYISENFSN 224
+ +P+ D K VK ++F+SSAG Y EP HVEGD K AGHV VE Y+ E
Sbjct: 124 SCQPLIDHFKGK-VKHYVFVSSAGAYAANSVEPMHVEGDKRKASAGHVAVEGYLEEQQLP 182
Query: 225 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
+ F+P Y+ G KDCE+WF +RI+R
Sbjct: 183 YTVFQPLYIYGPHTAKDCEQWFMERILR-------------------------------- 210
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFY 344
FNL SDR +T DG+ K A AA +IVHY+P G+ + FPFR +HF+
Sbjct: 211 -----CGHFNLCSDRCITFDGIVKAIAAAASKEAKIVHYNPAEMGLGKGEGFPFRAVHFF 265
Query: 345 AEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESL 395
A AK +LGW+ N +D+ + +++ GR K F +DDKIL ++
Sbjct: 266 ASSDKAKRVLGWQPQHNFLKDVDQLVKDFQASGRLDKQPDFSVDDKILAAV 316
>gi|186683636|ref|YP_001866832.1| NAD-dependent epimerase/dehydratase [Nostoc punctiforme PCC 73102]
gi|186466088|gb|ACC81889.1| NAD-dependent epimerase/dehydratase [Nostoc punctiforme PCC 73102]
Length = 312
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 121/327 (37%), Positives = 186/327 (56%), Gaps = 23/327 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL + L+ GHEV + G+ + P +I+ G +
Sbjct: 2 RILIM----GGTRFIGIYLTQLLVEQGHEVVLFNRGNRAT-----PSLQGVGQII--GDR 50
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T DP ++ + +FDV+ DNNG+ L +P+A+ + V+ F+++SSAG+Y +D
Sbjct: 51 T---DPTQLKAKLSQESFDVIFDNNGRELTDTQPLAEIFQGR-VQHFVYMSSAGVYLKSD 106
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PHVEGD+V P + H + E Y+++ + S RP Y+ G N + E WFFDRIVR
Sbjct: 107 QLPHVEGDLVDPKSRHKGKHETEAYLTQLGLPFTSIRPTYIYGPRNYNELEGWFFDRIVR 166
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG+G+ T + HV+DL+ +T + N +A I+N+ DR VT DG+A+ A
Sbjct: 167 DRPIPIPGNGLHITQLGHVKDLAKAMTQILGNKQAIGQ-IYNISGDRFVTFDGLARASAV 225
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
AAG +IVHYDPK +KAFP R HF+A A+ L W +L L+
Sbjct: 226 AAGKSPDATKIVHYDPKKFDFGKRKAFPMRVQHFFASVNKAQTELNWHPEYDLISGLQNS 285
Query: 370 FE-EYVKIGRDKKAMQFEIDDKILESL 395
E +Y+ +DK + F +D++IL++L
Sbjct: 286 LENDYLANAKDKADVDFSVDEEILQAL 312
>gi|376004433|ref|ZP_09782136.1| putative UDP-glucose 4-epimerase [Arthrospira sp. PCC 8005]
gi|375327198|emb|CCE17889.1| putative UDP-glucose 4-epimerase [Arthrospira sp. PCC 8005]
Length = 311
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/325 (37%), Positives = 181/325 (55%), Gaps = 23/325 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL K L+ GHEV + G+ K P + +I G +
Sbjct: 2 RILIM----GGTRFIGVYLTKILVSQGHEVVLFNRGN------KPSPVDGIKQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T D ++ + G TFDV+ DNNG+ L +P+AD VK F+++SSAG+Y +D
Sbjct: 50 T---DANQLKEKLSGETFDVIFDNNGRQLSDTQPLADLFNGQ-VKHFVYMSSAGVYLKSD 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH+EGD P + H+ + E Y+ + W S RP Y+ G N E WFFDRIV
Sbjct: 106 QMPHIEGDPTDPKSRHLGKYETETYLQKVGIPWTSIRPTYIYGPQNYNPLESWFFDRIVA 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
KRP+PIPG+GM T + HV DL++ + +AV + A ++N+ DR VT DG+AK CA
Sbjct: 166 KRPIPIPGNGMHITQLGHVEDLANAM-VAVLGNQTAIGQVYNISGDRFVTFDGLAKACAI 224
Query: 313 AAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
AAG ++++HYDPK +KAFP R HF+A+ A + L W+ +L LK+
Sbjct: 225 AAGESPDDLQLIHYDPKNFDFGKRKAFPLRVQHFFADVHKAINQLNWQPKYDLISGLKDS 284
Query: 370 FEEYVKIGRDKKAMQFEIDDKILES 394
+ ++ + F DD+I+++
Sbjct: 285 CQNDYLANSNQGEVDFSTDDEIIKA 309
>gi|67922306|ref|ZP_00515819.1| similar to Nucleoside-diphosphate-sugar epimerases [Crocosphaera
watsonii WH 8501]
gi|67855882|gb|EAM51128.1| similar to Nucleoside-diphosphate-sugar epimerases [Crocosphaera
watsonii WH 8501]
Length = 311
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/328 (37%), Positives = 179/328 (54%), Gaps = 32/328 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG- 134
++LI+ GG IG YL KEL+ GHEV + FNR N+ G
Sbjct: 2 RILIM----GGTRFIGVYLTKELVKKGHEVVL---------------FNRGNKPAPIEGI 42
Query: 135 KTVWGDPAEVGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
K + GD + + + +F+ + DNNG+ L +P+ + K +K F+++SSAG+Y
Sbjct: 43 KQIHGDRKDATQLKEKLASESFEAIFDNNGRELSDTQPLIEIFKDQ-LKHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+ + PH+EGD V P++ H E Y+ ++ W S RP Y+ G N D E WFFD
Sbjct: 102 LKSGQMPHIEGDEVDPNSRHKGKFATESYLEKSGIPWTSIRPSYIYGPQNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RIVR RP+PIP +G+ T H++DL + + + N E A I+N+ +R VT DG+AK
Sbjct: 162 RIVRNRPIPIPSNGLHITQFGHIQDLVTAMAAVLGN-EQAIGQIYNISGERYVTFDGLAK 220
Query: 309 LCAQAAGLPVE---IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
CA AAG + I+HYDPK KKAFP R HF+A+ A L W+ +L
Sbjct: 221 ACAVAAGKSADDLNIIHYDPKQFDFGKKKAFPLRIQHFFADIHKALQELNWQPKYDLISG 280
Query: 366 LKERFE-EYVKIGRDKKAMQFEIDDKIL 392
LK+ FE +Y+ RD+ + F +D++IL
Sbjct: 281 LKDSFENDYLASKRDQAEIDFSLDEQIL 308
>gi|388499356|gb|AFK37744.1| unknown [Lotus japonicus]
Length = 377
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/381 (35%), Positives = 202/381 (53%), Gaps = 19/381 (4%)
Query: 20 LAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLI 79
+A+ +P +LSFS L+S +S + L RR + SA+ KK+LI
Sbjct: 1 MARLVVPQQNQLSFSP---LASSLSDFSGTRLQTQIQFRRKAWQPKGFHVSASSTKKILI 57
Query: 80 VNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVW 138
+ GG IG +L++ L+ GH+VT+ T G + ++ F++ S+ K +
Sbjct: 58 M----GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDGDFSDF-SSKIKHLK 112
Query: 139 GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + V ++ FDVV D NG+ + V P+ + + ++QF++ SSAG+Y +D
Sbjct: 113 GDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPIIEALPN--LEQFIYCSSAGVYLKSD 170
Query: 196 EPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
PH E D V P + H ++ E + NW S RP Y+ G N EEWFF R+
Sbjct: 171 LLPHAEVDAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 230
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPGSG+Q T + HV+DL+++ + N + AS +FN+ D+ VT DG+A+ CA+
Sbjct: 231 GRPIPIPGSGIQITQLGHVKDLATVFVQVLGN-DKASKQVFNIAGDKYVTFDGLARACAK 289
Query: 313 AAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 371
A G P EI+HY+PK KK FPFR+ HF+A AK +LGW L E L + +
Sbjct: 290 AGGFPEPEIIHYNPKDFDFGKKKPFPFRDQHFFASVDKAKSVLGWEPEFGLVEGLADSYN 349
Query: 372 EYVKIGRDKKAMQFEIDDKIL 392
G +K F DD IL
Sbjct: 350 LDFGRGTFRKEADFSTDDIIL 370
>gi|416389981|ref|ZP_11685430.1| mRNA-binding protein [Crocosphaera watsonii WH 0003]
gi|357264136|gb|EHJ13062.1| mRNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 311
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/328 (37%), Positives = 178/328 (54%), Gaps = 32/328 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG- 134
++LI+ GG IG YL KEL+ GHEV + FNR N+ G
Sbjct: 2 RILIM----GGTRFIGVYLTKELVKQGHEVVL---------------FNRGNKPAPIEGI 42
Query: 135 KTVWGDPAEVGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
K + GD + + + F+ + DNNG+ L +P+ + K +K F+++SSAG+Y
Sbjct: 43 KQIHGDRKDATQLKEKLASENFEAIFDNNGRELSDTQPLIEIFKDQ-LKHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+ + PH+EGD V P++ H E Y+ ++ W S RP Y+ G N D E WFFD
Sbjct: 102 LKSGQMPHIEGDEVDPNSRHKGKFATESYLEKSGIPWTSIRPSYIYGPQNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RIVR RP+PIP +G+ T H++DL + + + N E A I+N+ +R VT DG+AK
Sbjct: 162 RIVRNRPIPIPSNGLHITQFGHIQDLVTAMAAVLGN-EQAIGQIYNISGERYVTFDGLAK 220
Query: 309 LCAQAAGLPVE---IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
CA AAG + I+HYDPK KKAFP R HF+A+ A L W+ +L
Sbjct: 221 ACAVAAGKSADDLNIIHYDPKQFDFGKKKAFPLRIQHFFADIHKALQELNWQPKYDLISG 280
Query: 366 LKERFE-EYVKIGRDKKAMQFEIDDKIL 392
LK+ FE +Y+ RD+ + F +D++IL
Sbjct: 281 LKDSFENDYLASQRDQAEIDFSLDEQIL 308
>gi|423065819|ref|ZP_17054609.1| NAD-dependent epimerase/dehydratase [Arthrospira platensis C1]
gi|406712577|gb|EKD07761.1| NAD-dependent epimerase/dehydratase [Arthrospira platensis C1]
Length = 314
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/328 (36%), Positives = 183/328 (55%), Gaps = 23/328 (7%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA 132
+K ++LI+ GG IG YL K L+ GH+V + G++ S P + +I
Sbjct: 2 DKMRILIM----GGTRFIGVYLTKILVSHGHDVVLFNRGNKPS------PVDGIKQI--H 49
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
G +T D ++ + G TFDV+ DNNG+ L +P+AD VK F+++SSAG+Y
Sbjct: 50 GDRT---DANQLKEKLSGETFDVIFDNNGRQLSDTQPLADLFNGQ-VKHFVYMSSAGVYL 105
Query: 193 PADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
+D+ PH+EGD P + H+ + E Y+ + W S RP Y+ G N E WFFDR
Sbjct: 106 KSDQMPHIEGDPTDPKSRHLGKYETETYLQKVGIPWTSIRPTYIYGPQNYNPLEAWFFDR 165
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
IV KRP+PIPG+GM T + HV DL++ + +AV A ++N+ DR VT DG+AK
Sbjct: 166 IVAKRPIPIPGNGMHITQLGHVEDLANAM-VAVLGNSTAIGQVYNISGDRFVTFDGLAKA 224
Query: 310 CAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDL 366
CA AAG ++++HYDPK +KAFP R HF+A+ A + L W+ +L L
Sbjct: 225 CAIAAGQSPDDLQLIHYDPKNFDFGKRKAFPLRVQHFFADVHKAINQLNWQPKYDLISGL 284
Query: 367 KERFEEYVKIGRDKKAMQFEIDDKILES 394
K+ + ++ + F DD+I+++
Sbjct: 285 KDSCQNDYLANSNQGEVDFSTDDEIIKA 312
>gi|434391359|ref|YP_007126306.1| NAD-dependent epimerase/dehydratase [Gloeocapsa sp. PCC 7428]
gi|428263200|gb|AFZ29146.1| NAD-dependent epimerase/dehydratase [Gloeocapsa sp. PCC 7428]
Length = 314
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/319 (38%), Positives = 175/319 (54%), Gaps = 28/319 (8%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGDPAE 143
GG IG YL ++L+ GHEV + FNR N + AG + GD
Sbjct: 7 GGTRFIGVYLTRKLVAQGHEVVL---------------FNRGNRPLPVAGVAQITGDRTH 51
Query: 144 VGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
++ + FDV+ DNNG+ L +P+A+ K V+ F+++SSAG+Y P+D+ PH
Sbjct: 52 ADDLKEKLSSQNFDVIFDNNGRELSDTQPLAEIFKDR-VQHFVYMSSAGVYLPSDQMPHQ 110
Query: 201 EGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP 257
EGD V P + H + E ++++ + + RP Y+ G N + E WFFDRIVR RP+P
Sbjct: 111 EGDAVDPKSRHRGKHETEAFLAQLGIPFTAIRPTYIYGPQNYNELESWFFDRIVRDRPMP 170
Query: 258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL- 316
IPG+G+ T HV DL+ + + + +A I+N+ DR VT DG+A+ CA AAG
Sbjct: 171 IPGNGLHITQFGHVDDLAQAMCQVLGSAQAVGE-IYNVSGDRYVTFDGLARACAVAAGKS 229
Query: 317 --PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EY 373
+EIVHYDPK +KAFP R HF+A AK L W+ +L LK+ F +Y
Sbjct: 230 PEALEIVHYDPKKFDFGKRKAFPMRVQHFFAAVDKAKTQLNWQPRYDLISGLKDSFHNDY 289
Query: 374 VKIGRDKKAMQFEIDDKIL 392
+ GRD + F DD+IL
Sbjct: 290 LASGRDAADVDFSTDDEIL 308
>gi|428208069|ref|YP_007092422.1| NAD-dependent epimerase/dehydratase [Chroococcidiopsis thermalis
PCC 7203]
gi|428009990|gb|AFY88553.1| NAD-dependent epimerase/dehydratase [Chroococcidiopsis thermalis
PCC 7203]
Length = 309
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/329 (37%), Positives = 181/329 (55%), Gaps = 32/329 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL K L+ GHEV + FNR N + G
Sbjct: 2 RILIM----GGTRFIGVYLTKILVAQGHEVVL---------------FNRGNRPIPVEGI 42
Query: 136 T-VWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
T + GD P ++ + FD + DNNG+ L +P+A+ V+ F+++SSAG+Y
Sbjct: 43 TQIQGDRTSPEQLKAKLSQEHFDAIYDNNGRELSDTQPLAEIFHDR-VQHFVYMSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ PHVEGD V P + H + E Y+++ + + RP Y+ G+ N D E WFFD
Sbjct: 102 LRSDQMPHVEGDPVDPKSRHRGKYETEAYLAQVGLPFTAIRPTYIYGASNYNDLESWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RIVR RP+PIP +G+ T + HV DL+ + + N E A ++N+ DR VT DG+A+
Sbjct: 162 RIVRDRPIPIPANGLHITQMGHVEDLAQAMARVLGN-ERAIGQVYNVSGDRYVTFDGLAR 220
Query: 309 LCAQAAGLPVE---IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
CA AAG E IVHY+PK +KAFP R HF+A A L W+ +L
Sbjct: 221 ACAVAAGKSPEELAIVHYEPKNFDFGKRKAFPLRIQHFFASVNKAITELNWQPKYDLISG 280
Query: 366 LKERFE-EYVKIGRDKKAMQFEIDDKILE 393
LK+ F+ +Y+ GRDK + F +D++IL+
Sbjct: 281 LKDSFQNDYIATGRDKAEVDFSVDEEILK 309
>gi|427717348|ref|YP_007065342.1| NAD-dependent epimerase/dehydratase [Calothrix sp. PCC 7507]
gi|427349784|gb|AFY32508.1| NAD-dependent epimerase/dehydratase [Calothrix sp. PCC 7507]
Length = 312
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/332 (36%), Positives = 183/332 (55%), Gaps = 33/332 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA--G 133
++LI+ GG IG YL + L+ GH+V + FNR N V + G
Sbjct: 2 RILIM----GGTRFIGVYLTQRLVEQGHQVVL---------------FNRGNRAVPSLQG 42
Query: 134 GKTVWGDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ + GD + + ++ FDV+ DNNG+ L +P+A+ + V+ F+++SSAG+
Sbjct: 43 VEQIIGDRTDATQLKAKLSQENFDVIFDNNGRELTDTQPLAEIFQDR-VQHFVYMSSAGV 101
Query: 191 YKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
Y +D+ PHVEGD V P + H + E Y+ + + S RP Y+ G N + E WFF
Sbjct: 102 YLKSDQLPHVEGDPVDPKSRHRGKHETEAYLFSSRLPFTSIRPTYIYGPLNYNELESWFF 161
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
DRIV RP+PIPG+G+ T + HV+DL++ ++ V N +A I+N+ DR VT DG+A
Sbjct: 162 DRIVHDRPIPIPGNGLHLTQLGHVKDLAAAMSQIVGNQQAI-GQIYNISGDRFVTFDGLA 220
Query: 308 KLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPE 364
+ C QA G ++IVHYDPK +KAFP R HF+A A L W+ +L
Sbjct: 221 RACVQATGKSPDAIKIVHYDPKKFDFGKRKAFPMRVQHFFASVHKATTELSWQPKYDLIS 280
Query: 365 DLKERF-EEYVKIGRDKKAMQFEIDDKILESL 395
L + F +Y+ GRDK + F +D +IL +L
Sbjct: 281 GLTDSFTNDYLATGRDKVEVDFSVDAEILAAL 312
>gi|307150534|ref|YP_003885918.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7822]
gi|306980762|gb|ADN12643.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7822]
Length = 311
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 187/331 (56%), Gaps = 32/331 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG- 134
++LI+ GG IG +L K L+ GHEV + FNR N+ V G
Sbjct: 2 RILIM----GGTRFIGVFLTKILVKQGHEVVL---------------FNRGNKPVPIEGV 42
Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD P ++ + FD + DNNG+ L+ +P+A+ K ++ F+++SSAG+Y
Sbjct: 43 EQIHGDRQDPVQLKEKLANQKFDAIFDNNGRELNDTQPLAEIFKDQ-IQHFIYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+ +D+ PH+EGD V P++ H + E Y+++ W S RP Y+ G N D E WFFD
Sbjct: 102 QKSDQMPHIEGDPVDPNSRHKGKFETEDYLAKAGIPWTSIRPTYIYGPQNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
R+VR RP+ IPG+G+ T + HV+DL++ + + N +A I+N+ +R VT DG+AK
Sbjct: 162 RLVRDRPILIPGNGLHITQLGHVQDLAAAMAAVLGNDQAIGQ-IYNISGERYVTFDGLAK 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
CA A G ++++HY+PK +K+FP R HF+A+ A L W +L
Sbjct: 221 ACAVAVGKSPDEIKLLHYNPKKFDFGKRKSFPLRVQHFFADVHKAMTQLNWTPEFDLVSG 280
Query: 366 LKERFE-EYVKIGRDKKAMQFEIDDKILESL 395
LK+ +E +Y+ GR + + F +D++IL +L
Sbjct: 281 LKDSYEHDYLPSGRHQAEIDFSVDEEILSTL 311
>gi|119487296|ref|ZP_01621047.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Lyngbya sp. PCC
8106]
gi|119455851|gb|EAW36986.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Lyngbya sp. PCC
8106]
Length = 310
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 123/327 (37%), Positives = 180/327 (55%), Gaps = 24/327 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL + L+ GHEV + G+ K P + +I G +
Sbjct: 2 RILIM----GGTRFIGVYLTQILVEQGHEVVLFNRGN------KPAPVDGIKQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T D ++ + FD + DNNG+ L +P+AD K VK F+++SSAG+Y +
Sbjct: 50 T---DADQIKEKLANENFDAIFDNNGRQLSDTQPLADLFKGK-VKHFVYMSSAGVYLKSP 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
E PH+EGD P + H+ + E Y+ E W S RP Y+ G N E WFFDRIV
Sbjct: 106 EMPHIEGDKTDPKSRHLGKYETETYLQEQQLPWTSIRPTYIYGPQNYNPLESWFFDRIVA 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG+G+ T + HV+DL++ + +AV E A ++N+ +R VT DG+A CA
Sbjct: 166 NRPIPIPGNGLHITQLGHVKDLANAM-VAVLGNENAIGQVYNISGERYVTFDGLAGACAV 224
Query: 313 AAGLPVE---IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
AAG E IVHYDPK KK FP R HF+A+ A + L W+ +L LK+
Sbjct: 225 AAGKSAEDLNIVHYDPKQFDFGKKKPFPLRLQHFFADVHKAMNELNWQPEFDLVSGLKDS 284
Query: 370 FEEYVKIGRDKKAMQFEIDDKILESLK 396
FE + DK + F +DD+I+++++
Sbjct: 285 FENDYQT-TDKAEVDFSLDDEIIKAVQ 310
>gi|209523545|ref|ZP_03272099.1| NAD-dependent epimerase/dehydratase [Arthrospira maxima CS-328]
gi|209495950|gb|EDZ96251.1| NAD-dependent epimerase/dehydratase [Arthrospira maxima CS-328]
Length = 311
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 120/325 (36%), Positives = 180/325 (55%), Gaps = 23/325 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL K L+ GH+V + G+ K P + +I G +
Sbjct: 2 RILIM----GGTRFIGVYLTKILVSHGHDVVLFNRGN------KPSPVDGIKQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T D ++ + G TFDV+ DNNG+ L +P+AD VK F+++SSAG+Y +D
Sbjct: 50 T---DANQLKEKLSGETFDVIFDNNGRQLSDTQPLADLFNGQ-VKHFVYMSSAGVYLKSD 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH+EGD P + H+ + E Y+ + W S RP Y+ G N E WFFDRIV
Sbjct: 106 QMPHIEGDPTDPKSRHLGKYETETYLQKVGIPWTSIRPTYIYGPQNYNPLESWFFDRIVA 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
KRP+PIPG+GM T + HV DL++ + +AV A ++N+ DR VT DG+AK CA
Sbjct: 166 KRPIPIPGNGMHITQLGHVEDLANAM-VAVLGNSTAIGQVYNISGDRFVTFDGLAKACAI 224
Query: 313 AAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
AAG ++++HYDPK +KAFP R HF+A+ A + L W+ +L LK+
Sbjct: 225 AAGQSPDDLQLIHYDPKNFDFGKRKAFPLRVQHFFADVHKAINQLNWQPKYDLISGLKDS 284
Query: 370 FEEYVKIGRDKKAMQFEIDDKILES 394
+ ++ + F DD+I+++
Sbjct: 285 CQNDYLANSNQGEVDFSTDDEIIKA 309
>gi|356572914|ref|XP_003554610.1| PREDICTED: uncharacterized protein At1g09340, chloroplastic-like
[Glycine max]
Length = 378
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 193/372 (51%), Gaps = 20/372 (5%)
Query: 30 RLSFSSYSHLSSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAV 89
+LSFS + SSL S + R+ + SA+ KK+LI+ GG
Sbjct: 11 QLSFSPLA--SSLFDFSGTRLQTQLQFKRKLCHPKGSFYVSASSTKKILIM----GGTRF 64
Query: 90 IGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GDPAEVGNV 147
IG +L++ L+ GH+VT+ T G + ++ P N+ K + GD + V
Sbjct: 65 IGVFLSRLLVKEGHQVTLFTRG--KAPVTQQLPGESDNDYADFSSKILHLKGDRKDFDFV 122
Query: 148 VGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
++ FDVV D NG+ D V P+ D + ++QF++ SSAG+Y +D PH E D
Sbjct: 123 KSSLSAEGFDVVYDINGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHAETDA 180
Query: 205 VKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS 261
V P + H ++ E + NW S RP Y+ G N EEWFF R+ RP+PIP S
Sbjct: 181 VDPKSRHKGKLETESLLQARGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPSS 240
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EI 320
G+Q T + HV+DL++ + N E AS +FN+ ++ VT DG+A+ CA+A G P EI
Sbjct: 241 GLQITQLGHVKDLATAFIQVLGN-EKASKEVFNISGEKYVTFDGLARACAKAGGFPEPEI 299
Query: 321 VHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDK 380
+HY+PK KK+FPFR+ HF+A AK +LGW L E L + + G +
Sbjct: 300 IHYNPKDFDFGKKKSFPFRDQHFFASIEKAKRVLGWEPEFGLVEGLADSYNLDFGRGTYR 359
Query: 381 KAMQFEIDDKIL 392
K F DD IL
Sbjct: 360 KEADFSTDDIIL 371
>gi|388520007|gb|AFK48065.1| unknown [Lotus japonicus]
Length = 377
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/380 (35%), Positives = 197/380 (51%), Gaps = 17/380 (4%)
Query: 20 LAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLI 79
+A+ +P +LSFS L+S +S + L RR + SA+ KK+LI
Sbjct: 1 MARLVVPQQNQLSFSP---LASSLSDFSGTRLQTQIQFRRKAWQPKGFHVSASSTKKILI 57
Query: 80 VNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG 139
+ GG IG +L++ L+ GH+VT+ T G + + S+ K + G
Sbjct: 58 M----GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDSDFSDFSSKIKHLKG 113
Query: 140 DPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE 196
D + V ++ FDVV D NG+ + V P+ + + ++QF++ SSAG+Y +D
Sbjct: 114 DRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPIIEALPN--LEQFIYCSSAGVYLKSDL 171
Query: 197 PPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK 253
PH E D V P + H ++ E + NW S RP Y+ G N EEWFF R+
Sbjct: 172 LPHAEVDAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAG 231
Query: 254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 313
RP+PIPGSG+Q T + HV+DL+++ + N + AS +FN+ D+ VT DG+A+ CA+A
Sbjct: 232 RPIPIPGSGIQITQLGHVKDLATVFVQVLGN-DKASKQVFNIAGDKYVTFDGLARACAKA 290
Query: 314 AGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE 372
G P EI+HY+PK KK FPFR+ HF+A AK +LGW E L + +
Sbjct: 291 GGFPEPEIIHYNPKDFDFGKKKPFPFRDQHFFASVDKAKSVLGWEPEFGFVEGLADSYNL 350
Query: 373 YVKIGRDKKAMQFEIDDKIL 392
G +K F DD IL
Sbjct: 351 DFGRGTFRKEADFSTDDIIL 370
>gi|428768541|ref|YP_007160331.1| NAD-dependent epimerase/dehydratase [Cyanobacterium aponinum PCC
10605]
gi|428682820|gb|AFZ52287.1| NAD-dependent epimerase/dehydratase [Cyanobacterium aponinum PCC
10605]
Length = 310
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/326 (36%), Positives = 181/326 (55%), Gaps = 24/326 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG L K L+ GHEV + G+ K P N +I G +
Sbjct: 2 RILIM----GGTRFIGVSLTKILVAQGHEVVLFNRGN------KPAPVNGIEQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T + +E+ + + G FD + DNNG+ L +P+ + K + F+++SSAG+Y P++
Sbjct: 50 T---NASELKDKLAGQKFDAIFDNNGRELKDTKPLVELFKDQ-ISHFVYVSSAGVYLPSE 105
Query: 196 EPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH E D V P + H + E Y+ + S RP Y+ GSGN D E WFFDRI+R
Sbjct: 106 QMPHREDDPVDPQSRHKGKYETETYLKAEGVPFTSIRPTYIYGSGNYNDLEAWFFDRILR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
+P+ IP G+ FT HV DL++ ++L + N +A I+N+ DR VT G+A CA+
Sbjct: 166 NQPILIPYHGLHFTQFGHVEDLATAMSLVLGNSQAVGQ-IYNISGDRYVTFKGLALACAE 224
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
A G +EI +YDP ++ +KAFP R HF+A+ A+ L W+ +L LKE
Sbjct: 225 AVGKNPEEIEIKYYDPAQFNLEKRKAFPIRVQHFFADISKAQKELNWQPKYDLISGLKES 284
Query: 370 FE-EYVKIGRDKKAMQFEIDDKILES 394
FE +Y+ GRDK + F +D +IL +
Sbjct: 285 FENDYLANGRDKVDVDFSLDQEILNN 310
>gi|428299906|ref|YP_007138212.1| NAD-dependent epimerase/dehydratase [Calothrix sp. PCC 6303]
gi|428236450|gb|AFZ02240.1| NAD-dependent epimerase/dehydratase [Calothrix sp. PCC 6303]
Length = 312
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/319 (38%), Positives = 173/319 (54%), Gaps = 28/319 (8%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGDPAE 143
GG IG YL K L+ GHEV + FNR N V G + + GD
Sbjct: 7 GGTRFIGVYLTKLLVEQGHEVVL---------------FNRGNRPVPVEGVRQIKGDRTN 51
Query: 144 VGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
++ + FD V DNNG+ L +P+A+ + S V+ F+++SSAG+Y +D+ PH
Sbjct: 52 SESLKAALANEKFDAVFDNNGRELTDTQPLAEIFQDS-VQHFVYMSSAGVYLKSDQMPHY 110
Query: 201 EGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP 257
E D V P + H + E ++ + + S RP Y+ G N D E WFFDRIVR RP+P
Sbjct: 111 EEDAVDPKSRHKGKHETESFLMQQDIPFTSIRPTYIYGPQNYNDLEAWFFDRIVRNRPIP 170
Query: 258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 317
IPG+GM T HV+DL+ + + N +A ++N+ +R VT DG+A+ CA AAG
Sbjct: 171 IPGNGMHITQFGHVQDLAQTMCRVLGN-SSAVRQVYNVSDNRFVTFDGLARACAVAAGKA 229
Query: 318 ---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EY 373
++IVHYDPK +KAFP R HF+A A LGW+ +L LK+ FE ++
Sbjct: 230 PEDIQIVHYDPKKFDFGKRKAFPMRVQHFFASVNKAMTELGWQPQYDLISGLKDSFENDF 289
Query: 374 VKIGRDKKAMQFEIDDKIL 392
+ GR K + F DD+IL
Sbjct: 290 LVSGRSNKEIDFSTDDEIL 308
>gi|414076098|ref|YP_006995416.1| NAD-dependent epimerase/dehydratase [Anabaena sp. 90]
gi|413969514|gb|AFW93603.1| NAD-dependent epimerase/dehydratase [Anabaena sp. 90]
Length = 310
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/329 (37%), Positives = 180/329 (54%), Gaps = 31/329 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++L++ GG IG YL + L+ GHEV + FNR N AG
Sbjct: 2 RILVI----GGTRFIGVYLTQLLIKDGHEVVL---------------FNRGNHAAPAGVG 42
Query: 136 TVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
+ GD ++ + +FDVV DNNG+ L +P+A+ + VK F+++SSAG+Y
Sbjct: 43 QIIGDRTNSTQLQEKLAPESFDVVFDNNGRELTDTQPLAEIFQGR-VKHFVYMSSAGVYL 101
Query: 193 PADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
+D+ PH+EGD V P + H + E Y+ + + S RP Y+ G N E WFFDR
Sbjct: 102 KSDQMPHLEGDAVDPKSRHQGKHETEAYLKQLGIPFTSIRPTYIYGPQNYNPLESWFFDR 161
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
IVR RP+ IPG+GM T + HV DL+ +T + N +A I+N+ DR VT DG+A+
Sbjct: 162 IVRDRPICIPGNGMHITQLGHVWDLAQAMTQIIGNDQAIGQ-IYNISGDRFVTFDGLARA 220
Query: 310 CAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDL 366
CA AAG V+IVHYDPK +KAFP R HF+A A+ L W+ +L L
Sbjct: 221 CAVAAGKSADDVKIVHYDPKKFDFGKRKAFPMRVQHFFASVNKAQIELNWQPKYDLISGL 280
Query: 367 KERF-EEYVKIGRDKKAMQFEIDDKILES 394
+ +Y+ G+DK + F +DD+IL++
Sbjct: 281 QNSLVNDYLINGQDKLEVDFSVDDEILKA 309
>gi|166367389|ref|YP_001659662.1| NAD-dependent epimerase/dehydratase [Microcystis aeruginosa
NIES-843]
gi|166089762|dbj|BAG04470.1| NAD-dependent epimerase/dehydratase [Microcystis aeruginosa
NIES-843]
Length = 313
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/328 (37%), Positives = 178/328 (54%), Gaps = 32/328 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGG 134
K+LI+ GG IG L K L+ GHEV + FNR N+ AG
Sbjct: 2 KILIM----GGTRFIGVSLTKVLVEQGHEVVL---------------FNRGNKPAPVAGV 42
Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD PA++ + +F+ + DNNG+ L +P+ + + + F+++SSAG+Y
Sbjct: 43 RQIHGDRTDPAQLKEKLKNESFEAIFDNNGRELSDTQPLVEIFRER-IGHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ PH EGD + P + H + E Y+SE W S RP Y+ G GN D E WFFD
Sbjct: 102 LKSDQMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPGNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
R+VR RP+PIPG G FT HV DL+ + + N +A ++N+ DR VT +G+AK
Sbjct: 162 RLVRNRPIPIPGHGEHFTQFGHVVDLAKAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAK 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
CA A G +EIV+Y+PK KK FP R HFYA+ A L W+ +L
Sbjct: 221 ACAAAMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHFYADINKATRELNWQPEYDLVSG 280
Query: 366 LKERFE-EYVKIGRDKKAMQFEIDDKIL 392
L + F+ +Y+ GRD++ + IDD+IL
Sbjct: 281 LTDSFQNDYLPSGRDRQEIDLAIDDQIL 308
>gi|225450527|ref|XP_002281395.1| PREDICTED: uncharacterized protein At1g09340, chloroplastic [Vitis
vinifera]
gi|147773479|emb|CAN73432.1| hypothetical protein VITISV_032681 [Vitis vinifera]
gi|296089806|emb|CBI39625.3| unnamed protein product [Vitis vinifera]
Length = 378
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/333 (36%), Positives = 180/333 (54%), Gaps = 14/333 (4%)
Query: 67 VKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF 126
+ +A+ +KK+L++ GG IG +LA+ L+ GH+VT+ T G + ++
Sbjct: 46 LHVTASGEKKILMM----GGTRFIGVFLARLLVKEGHQVTLFTRGKAAITQQLPGESDKD 101
Query: 127 NEIVSAGGKTVWGDPAE---VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL 183
S+ + GD + V + FDVV D NG+ + P+ D + ++Q++
Sbjct: 102 YAEFSSKVLHLKGDRKDFEFVKTSLAAEGFDVVYDINGREAVEIEPILDALPN--LQQYI 159
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNK 240
+ SSAG+YK +D PH E D V P + H ++ E + NW S RP Y+ G N
Sbjct: 160 YCSSAGVYKKSDLLPHCETDAVDPKSRHKGKLETESLLDSRGVNWTSIRPVYIYGPLNYN 219
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
EEWFF R+ RP+PIP SG+Q T + HV+DL+ L + N E AS +FN+ ++
Sbjct: 220 PVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFLLVLSN-EKASKQVFNISGEKY 278
Query: 301 VTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRST 359
VT DG+A+ CA+ AG P EIVHY+PK KKAFPFR+ HF+A AK +LGW+
Sbjct: 279 VTFDGLARACAKGAGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIEKAKSVLGWKPE 338
Query: 360 TNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
+L E L + + G +K F DD IL
Sbjct: 339 FDLVEGLADSYNLDFGRGTFRKEADFSTDDIIL 371
>gi|218439709|ref|YP_002378038.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7424]
gi|218172437|gb|ACK71170.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7424]
Length = 311
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/331 (35%), Positives = 181/331 (54%), Gaps = 32/331 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG- 134
+VL++ GG IG YL K L+ GH+V + FNR N+ V G
Sbjct: 2 RVLVM----GGTRFIGVYLTKVLVKQGHDVVL---------------FNRGNKPVPIEGI 42
Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD ++ + + FD + DNNG+ L +P+A+ K ++ F+++SSAG+Y
Sbjct: 43 EQIHGDRQDSTQLKDKLASEKFDAIFDNNGRELTDTQPLAEIFKDH-IQHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+ D+ PH EGD V P++ H + E Y+++ W S RP Y+ G N D E WFFD
Sbjct: 102 QKTDQMPHREGDPVDPNSRHKGKFETEDYLAKTGLPWTSIRPTYIYGPQNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RIVR RP+ IP G T + HV DL++ + + NP+A I+N+ DR VT DG+AK
Sbjct: 162 RIVRDRPILIPAHGSYITQLGHVHDLATAMAAVLNNPKAIGQ-IYNVSGDRYVTFDGLAK 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
CA AAG ++++HY+PK +K+FP R HF+A+ A + L W +L
Sbjct: 221 ACAIAAGKSPDEIKLLHYNPKQFDFGKRKSFPLRTQHFFADVHKAMNDLNWTPEYDLISG 280
Query: 366 LKERFE-EYVKIGRDKKAMQFEIDDKILESL 395
LK+ +E +Y+ GR + + F +D+ IL +
Sbjct: 281 LKDSYENDYLASGRHQAEIDFSVDEDILSAF 311
>gi|254422655|ref|ZP_05036373.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Synechococcus
sp. PCC 7335]
gi|196190144|gb|EDX85108.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Synechococcus
sp. PCC 7335]
Length = 309
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/324 (37%), Positives = 182/324 (56%), Gaps = 24/324 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
+VL++ GG IG YL ++L+ GH VT++ G+ + P + IV +
Sbjct: 2 RVLVI----GGTRFIGVYLTRQLVKQGHAVTLLNRGNHPA------PVDEVETIVC--DR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T DP + + +FD + DNNG+ L +P+AD K +K +++SSAG+Y +D
Sbjct: 50 T---DPEALKQALSDQSFDAIFDNNGRELAHTKPLADLFKGK-LKHLVYVSSAGVYAKSD 105
Query: 196 EPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PHVEGD V P++ H E Y+ E + + RP Y+ G N E+WFFDR+VR
Sbjct: 106 QMPHVEGDRVDPNSRHKGKFHTEDYLREQGIPFTAIRPVYIYGPQNYNPLEKWFFDRLVR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPGSGM T++ H +DL++ + + N + A I+N+ D+AVT DG+A+ CA
Sbjct: 166 DRPIPIPGSGMALTHLGHCQDLAAAMVSVLGN-DNAVGEIYNISGDKAVTFDGLARACAI 224
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
A V+IVHY+PK KKAFP R HF+ + AK L W+ +L + LK+
Sbjct: 225 AMEKDPDAVKIVHYNPKDFDFGKKKAFPMRVQHFFTDISKAKAELDWQPQFSLIDGLKDS 284
Query: 370 FE-EYVKIGRDKKAMQFEIDDKIL 392
+E +Y+ K + F +DD+IL
Sbjct: 285 YENDYLANNLHKAEIDFSLDDQIL 308
>gi|298491512|ref|YP_003721689.1| NAD-dependent epimerase/dehydratase ['Nostoc azollae' 0708]
gi|298233430|gb|ADI64566.1| NAD-dependent epimerase/dehydratase ['Nostoc azollae' 0708]
Length = 310
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/330 (36%), Positives = 179/330 (54%), Gaps = 31/330 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++L++ GG IG YL + L+ GHEV + FNR N V G
Sbjct: 2 RILVI----GGTRFIGVYLTQLLVEVGHEVVL---------------FNRGNHPVPDGVG 42
Query: 136 TVWGDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
+ GD + + + FDV+ DNNG+ L +P+A+ + V+ F+++SSAG+Y
Sbjct: 43 QIIGDRTDSTQLTEKLAQEEFDVIFDNNGRELADTKPLAEIFQGR-VQHFVYMSSAGVYL 101
Query: 193 PADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
+D+ PH+EGD + P + H + E Y+ + + S RP Y+ G N E WFFDR
Sbjct: 102 KSDQMPHMEGDTLDPKSRHKGKHETEAYLQQLGIPFTSIRPTYIYGPQNYNPLESWFFDR 161
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
IVR RP+PI G+GM T + HV+DL+ +T + N E I+N+ DR VT DG+A+
Sbjct: 162 IVRDRPIPIAGNGMHITQLGHVKDLAKAMTQVISN-ETVVRQIYNISGDRFVTFDGLARA 220
Query: 310 CAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDL 366
CA AAG ++IVHYDPK +KAFP R HF+A A L W+ +L L
Sbjct: 221 CAVAAGKSADHIKIVHYDPKKFDFGKRKAFPMRVQHFFASVNKAMTELNWQPDYDLVSGL 280
Query: 367 KERFE-EYVKIGRDKKAMQFEIDDKILESL 395
++ +Y+ G DK + F +DD+IL+++
Sbjct: 281 QDSLHNDYLVNGADKAEIDFSVDDEILKAV 310
>gi|312282041|dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila]
Length = 379
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/332 (37%), Positives = 181/332 (54%), Gaps = 18/332 (5%)
Query: 70 SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
SA+ +KK+LI+ GG IG +L++ L+ GH+VT+ T G S K+ P +
Sbjct: 49 SASSEKKILIM----GGTRFIGVFLSRLLVKEGHQVTLFTRG--KSPIAKQLPGESDQDF 102
Query: 130 VSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
K + GD + V ++ FDVV D NG+ + V P+ D ++Q+++
Sbjct: 103 ADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPK--LEQYIY 160
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKD 241
SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G N
Sbjct: 161 CSSAGVYLKSDILPHCEVDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNP 220
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
EEWFF R+ RP+P+P SG+Q + + HV+DL++ LAV E AS IFN+ ++ +
Sbjct: 221 VEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LAVLGNEKASREIFNISGEKYI 279
Query: 302 TLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
T DG+A+ CA+A G P EIVHY+PK KKAFPFR+ HF+A AK +LGW+
Sbjct: 280 TFDGLARACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEF 339
Query: 361 NLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
+L E L + + G +K F DD IL
Sbjct: 340 DLVEGLTDSYNLDFGRGTFRKEADFTTDDMIL 371
>gi|443658986|ref|ZP_21132269.1| hypothetical protein C789_2809 [Microcystis aeruginosa DIANCHI905]
gi|159027807|emb|CAO87020.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443332818|gb|ELS47406.1| hypothetical protein C789_2809 [Microcystis aeruginosa DIANCHI905]
Length = 311
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/328 (37%), Positives = 178/328 (54%), Gaps = 32/328 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGG 134
K+LI+ GG IG L K L+ GHEV + FNR N+ AG
Sbjct: 2 KILIM----GGTRFIGVSLTKVLVEQGHEVVL---------------FNRGNKPAPVAGV 42
Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD PA++ + +F+ + DNNG+ L +P+ + + ++ F+++SSAG+Y
Sbjct: 43 RQIHGDRTDPAQLQEKLKNESFEAIFDNNGRELSDTQPLVEIFRDR-IRHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ PH EGD + P + H + E Y+SE W S RP Y+ G N D E WFFD
Sbjct: 102 LKSDQMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPRNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
R+VR RP+PIPG G FT HV DL+ + + N +A ++N+ DR VT +G+AK
Sbjct: 162 RLVRNRPIPIPGHGEHFTQFGHVADLAKAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAK 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
CA A G +EIV+Y+PK KK FP R HFYA+ A L W+ +L
Sbjct: 221 ACAAAMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHFYADINKATRELNWQPEYDLVSG 280
Query: 366 LKERFE-EYVKIGRDKKAMQFEIDDKIL 392
L + F+ +Y+ GRD++ + IDD+IL
Sbjct: 281 LTDSFQNDYLASGRDRQEIDLAIDDQIL 308
>gi|168024677|ref|XP_001764862.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683898|gb|EDQ70304.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 131/369 (35%), Positives = 188/369 (50%), Gaps = 17/369 (4%)
Query: 43 VSISPSSFLACPASSRRSSVSAFTVKASA---AEKKKVLIVNTNSGGHAVIGFYLAKELL 99
V +S SS R+S V+ASA +E K +L++ GG IG +LA+EL+
Sbjct: 57 VQVSKSSLDVGVFKEGRTSSRRAVVRASADSGSESKNILMM----GGTRFIGLFLARELV 112
Query: 100 GSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNV---VGGVTFDVV 156
+GH+VT+ T G + + S+ K + GD + + + G F++V
Sbjct: 113 KAGHQVTLFTRGKAPITQQLPGESDEEYAEYSSKVKHLQGDRQDFDGLKEKLKGTNFNIV 172
Query: 157 LDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQ 213
D NG+ V P+ + G++Q++F SSAG+Y +D+ PH E D V P + H +
Sbjct: 173 YDINGREGKEVEPILEAL--PGLEQYIFCSSAGVYLKSDQLPHFEVDAVDPKSRHKGKLD 230
Query: 214 VEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD 273
E + W S RP Y+ G N EEWFF R+ RP+P+P SGMQ T + HV+D
Sbjct: 231 TETLLQSKGVAWTSIRPVYIYGPLNYNPVEEWFFQRLKEGRPIPVPNSGMQITQLGHVKD 290
Query: 274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDA 332
L+ L + N E A I+N+ + VT DG+AK CA A G P +IVHY+PK
Sbjct: 291 LARAFVLVLAN-EKAYGQIYNISGAKYVTFDGIAKACALAGGFPEPQIVHYNPKDFDFGK 349
Query: 333 KKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
KKAFP R+ HF+ A+ LG+ L E LK+ + G +KA F DD IL
Sbjct: 350 KKAFPLRDQHFFTSVEKAEKELGFTPEFGLVEGLKDSYSLDFGRGTFRKAADFSTDDMIL 409
Query: 393 ESLKVPIPV 401
E L + V
Sbjct: 410 EKLGIKTTV 418
>gi|282898032|ref|ZP_06306027.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Raphidiopsis brookii
D9]
gi|281197176|gb|EFA72077.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Raphidiopsis brookii
D9]
Length = 314
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/324 (36%), Positives = 182/324 (56%), Gaps = 26/324 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++L++ GG IG YL + L+ +GHEV + G+ P N +++ G +
Sbjct: 2 RILVI----GGTRFIGVYLTQLLIKAGHEVVLFNRGNH-------PTPNGVGQVI--GDR 48
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T DP+++ + +FDV+ DNNG+ L P+A + VK F+++SSAG+Y +D
Sbjct: 49 T---DPSQLSKL-SQESFDVIFDNNGRELTDTEPLAKMFQGR-VKHFIYMSSAGVYLKSD 103
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PHVEGD + P + H + E ++ + + S RP Y+ G N E WFFDRIVR
Sbjct: 104 QLPHVEGDTIDPKSRHRGKHETESFLQQLGIPFTSIRPTYIYGPKNYNPLESWFFDRIVR 163
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG+G+ T + HV+DL+ + + N + A I+N+ DR VT DG+A+ CA
Sbjct: 164 DRPIPIPGNGLHITQLGHVQDLAQAMLQVIGN-QTAVGKIYNVSGDRFVTFDGLARACAI 222
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
AAG V+IVHYDPK +KAFP R HF+A A L W+ +L L++
Sbjct: 223 AAGKSGESVKIVHYDPKKFDFGKRKAFPMRAQHFFASVNRAITELNWQPQYDLISGLQDS 282
Query: 370 FE-EYVKIGRDKKAMQFEIDDKIL 392
F+ +Y+ G + + F +DD+IL
Sbjct: 283 FQNDYLTSGAAQGEIDFSVDDEIL 306
>gi|363806740|ref|NP_001242018.1| uncharacterized protein LOC100791076 [Glycine max]
gi|255647108|gb|ACU24022.1| unknown [Glycine max]
Length = 378
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 192/372 (51%), Gaps = 20/372 (5%)
Query: 30 RLSFSSYSHLSSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAV 89
+LSFS+ + SSL S + R+ + SA+ KK+LI+ GG
Sbjct: 11 QLSFSTLA--SSLSDFSGTRLQTQLQFKRKQCHPKGSFYVSASSTKKILIM----GGTRF 64
Query: 90 IGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GDPAEVGNV 147
IG +L++ L+ GH+VT+ T G + ++ P ++ K + GD + V
Sbjct: 65 IGVFLSRLLVKEGHQVTLFTRG--KAPVTQQLPGESDSDYADFSSKILHLKGDRKDFDFV 122
Query: 148 VGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
++ FDVV D NG+ D V P+ D + ++QF++ SSAG+Y +D PH E D
Sbjct: 123 KSSLSAEGFDVVYDINGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHAETDA 180
Query: 205 VKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS 261
V P + H ++ E + NW S RP Y+ G N EEWFF R+ RP+PIPGS
Sbjct: 181 VDPKSRHKGKLETESLLQAKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGS 240
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EI 320
G+Q T + HV+DL+ N E AS +FN+ D+ VT DG+A+ CA+A G P EI
Sbjct: 241 GIQITQLGHVKDLAKAFIQVFGN-EKASKEVFNISGDKHVTFDGLARACAKAGGFPEPEI 299
Query: 321 VHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDK 380
+HY+PK KK+FPFR+ HF+A AK +LG L E L + + G +
Sbjct: 300 IHYNPKDFDFGKKKSFPFRDQHFFASVEKAKSVLGLEPEFGLVEGLADSYNLDFGRGTYR 359
Query: 381 KAMQFEIDDKIL 392
K F DD IL
Sbjct: 360 KEADFSTDDIIL 371
>gi|425440472|ref|ZP_18820772.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
gi|389719093|emb|CCH97032.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
Length = 314
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/324 (37%), Positives = 177/324 (54%), Gaps = 24/324 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG IG L K L+ GHEV + G+ K P +I G +
Sbjct: 5 KILIM----GGTRFIGVSLTKVLVEQGHEVVLFNRGN------KPAPVAGVRQI--HGDR 52
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T DPA++ + +F+ + DNNG+ L +P+ + + F+++SSAG+Y +D
Sbjct: 53 T---DPAQLKEKLKNESFEAIFDNNGRELSDTQPLVQIFRER-IGHFVYVSSAGVYLKSD 108
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH EGD + P + H + E Y+SE W S RP Y+ G GN D E WFFDR+VR
Sbjct: 109 QMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPGNYNDLEAWFFDRLVR 168
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG G FT HV DL+ + + N +A ++N+ DR VT +G+AK CA
Sbjct: 169 NRPIPIPGHGEHFTQFGHVVDLARAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAKACAA 227
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
A G +EIV+Y+PK KK FP R HFYA+ A L W+ +L L +
Sbjct: 228 AMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHFYADINKATRELNWQPEYDLVSGLADS 287
Query: 370 FE-EYVKIGRDKKAMQFEIDDKIL 392
F+ +Y+ GRD++ + + IDD+IL
Sbjct: 288 FQNDYLPSGRDRQEIDWAIDDQIL 311
>gi|443313431|ref|ZP_21043042.1| nucleoside-diphosphate-sugar epimerase [Synechocystis sp. PCC 7509]
gi|442776374|gb|ELR86656.1| nucleoside-diphosphate-sugar epimerase [Synechocystis sp. PCC 7509]
Length = 312
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 121/324 (37%), Positives = 180/324 (55%), Gaps = 24/324 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL K L +GHEV + G+ + P + +I+ G +
Sbjct: 2 RILII----GGTRFIGVYLTKLLAATGHEVVLFNRGNHPA------PVSGIEQII--GDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
TV E+ + FD + DNNG+ L +PVA+ + V+ F+++SSAG+Y PA
Sbjct: 50 TV---ADEITQKLSSQHFDAIFDNNGRELADTQPVAELF-AHKVQHFIYMSSAGVYLPAM 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
E PH EGD V P + H + E Y+++ + S RP Y+ G N E WFFDR++R
Sbjct: 106 ELPHGEGDAVDPKSRHKGKHETEAYLTKLGIPFTSIRPTYIYGPQNYNQLESWFFDRLIR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPGSG+ T + HV DL++ + V + A I+N+ DR VT D +A+ CA
Sbjct: 166 DRPIPIPGSGVHLTQLGHVEDLAAAMA-QVLGCKRAIGQIYNVSGDRYVTFDNLARACAV 224
Query: 313 AAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
A G V+IVHY+PK+ +KAFPFR HF+A A L W+ +L LK+
Sbjct: 225 AMGKSPENVKIVHYEPKSFDFGKRKAFPFRLQHFFASTAKATSELNWQPKYDLISGLKDS 284
Query: 370 FE-EYVKIGRDKKAMQFEIDDKIL 392
F +Y+ G+DK + F +D++I+
Sbjct: 285 FHNDYLATGKDKLDVDFNVDEQII 308
>gi|425470091|ref|ZP_18848968.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389880027|emb|CCI39175.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 311
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/324 (37%), Positives = 178/324 (54%), Gaps = 24/324 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG IG L K L+ GHEV + G+ K P +I G +
Sbjct: 2 KILIM----GGTRFIGVSLTKVLVEQGHEVVLFNRGN------KPAPVAGVRQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T DPA++ + +F+ + DNNG+ L +P+ + ++ F+++SSAG+Y +D
Sbjct: 50 T---DPAQLKEKLKNESFEAIFDNNGRELSDTQPLVEIFGDR-IQHFVYVSSAGVYLKSD 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH EGD + P + H + E Y+SE W S RP Y+ G GN D E WFFDR+VR
Sbjct: 106 QMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPGNYNDLEAWFFDRLVR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG G FT HV DL+ + + N +A ++N+ DR VT +G+AK CA
Sbjct: 166 NRPIPIPGHGEHFTQFGHVVDLAKAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAKACAA 224
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
A G +EIV+Y+PK KK FP R HFYA+ A L W+ +L L +
Sbjct: 225 AMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHFYADINKATRELNWQPEYDLVSGLADS 284
Query: 370 FE-EYVKIGRDKKAMQFEIDDKIL 392
F+ +Y+ GRD++ + + IDD+IL
Sbjct: 285 FQNDYLPSGRDRQEIDWAIDDQIL 308
>gi|427734696|ref|YP_007054240.1| nucleoside-diphosphate-sugar epimerase [Rivularia sp. PCC 7116]
gi|427369737|gb|AFY53693.1| nucleoside-diphosphate-sugar epimerase [Rivularia sp. PCC 7116]
Length = 312
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 120/327 (36%), Positives = 179/327 (54%), Gaps = 24/327 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG YL + L+ GH+V + G+ + P +I+ G +
Sbjct: 2 RILIM----GGTRFIGVYLTQLLVEQGHDVVLFNRGN------RPLPVENVTQII--GDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T D ++ + FDV+ DNNG+ L +P+AD ++ ++ F+++SSAG+Y +D
Sbjct: 50 T---DSKQLQEKLKNENFDVIFDNNGRELTDTQPLADIFQNR-LQHFVYMSSAGVYLKSD 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
PHVEGD V + H E ++ + S RP Y+ G N D E WFFDRI R
Sbjct: 106 SLPHVEGDAVDEKSRHKGKHHTESFLEVRDFPFTSIRPTYIYGPQNYNDLEAWFFDRITR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG+G+ T + HV+DL+ +T + N A I+N+ +R VT DG+A+ CA
Sbjct: 166 NRPLPIPGNGLHITQLGHVKDLAKAMTQVIGNSNAIKQ-IYNVSGNRYVTFDGLARACAV 224
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
A G ++IVHYDPK +KAFP R HF+A A L W +L LK+
Sbjct: 225 AVGKSADDIQIVHYDPKKFDFGKRKAFPMRMQHFFASVNKAITELDWHPDYDLTSGLKDS 284
Query: 370 FE-EYVKIGRDKKAMQFEIDDKILESL 395
F+ +Y+ RDKK + F IDD+IL ++
Sbjct: 285 FKNDYLVSERDKKEIDFSIDDEILNAV 311
>gi|422304038|ref|ZP_16391387.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|389790931|emb|CCI13248.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
Length = 311
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 123/328 (37%), Positives = 177/328 (53%), Gaps = 32/328 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGG 134
K+LI+ GG IG L K L+ GHEV + FNR N+ AG
Sbjct: 2 KILIM----GGTRFIGVSLTKVLVEQGHEVVL---------------FNRGNKPAPVAGV 42
Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD PA++ + F+ + DNNG+ L +P+ + + + F+++SSAG+Y
Sbjct: 43 RQIHGDRTDPAQLKEKLKNEDFEAIFDNNGRELSDTQPLVEIFRER-IGHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ PH EGD + P + H + E Y+SE W S RP Y+ G GN D E WFFD
Sbjct: 102 LKSDQMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPGNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
R+VR RP+PIPG G FT HV DL+ + + N +A ++N+ DR VT +G+AK
Sbjct: 162 RLVRNRPIPIPGHGEHFTQFGHVVDLAKAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAK 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
CA A G +EIV+Y+PK KK FP R HFYA+ A L W+ +L
Sbjct: 221 ACAAAMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHFYADINKATRELNWQPEYDLVSG 280
Query: 366 LKERFE-EYVKIGRDKKAMQFEIDDKIL 392
L + F+ +Y+ GRD++ + IDD+IL
Sbjct: 281 LADSFQNDYLPSGRDRQEIDLAIDDQIL 308
>gi|16330056|ref|NP_440784.1| hypothetical protein slr1540 [Synechocystis sp. PCC 6803]
gi|383321799|ref|YP_005382652.1| hypothetical protein SYNGTI_0890 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383324968|ref|YP_005385821.1| hypothetical protein SYNPCCP_0889 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490852|ref|YP_005408528.1| hypothetical protein SYNPCCN_0889 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436119|ref|YP_005650843.1| hypothetical protein SYNGTS_0890 [Synechocystis sp. PCC 6803]
gi|451814215|ref|YP_007450667.1| hypothetical protein MYO_18960 [Synechocystis sp. PCC 6803]
gi|1652543|dbj|BAA17464.1| slr1540 [Synechocystis sp. PCC 6803]
gi|339273151|dbj|BAK49638.1| hypothetical protein SYNGTS_0890 [Synechocystis sp. PCC 6803]
gi|359271118|dbj|BAL28637.1| hypothetical protein SYNGTI_0890 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359274288|dbj|BAL31806.1| hypothetical protein SYNPCCN_0889 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359277458|dbj|BAL34975.1| hypothetical protein SYNPCCP_0889 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407957953|dbj|BAM51193.1| hypothetical protein BEST7613_2262 [Synechocystis sp. PCC 6803]
gi|451780184|gb|AGF51153.1| hypothetical protein MYO_18960 [Synechocystis sp. PCC 6803]
Length = 311
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 117/324 (36%), Positives = 182/324 (56%), Gaps = 24/324 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG +L + L+ GHEV + G+ + P N +I G +
Sbjct: 2 RILIM----GGTRFIGIHLCRVLVAQGHEVVLFNRGN------RPDPVNGVAQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
V ++ + FDV+ DNNG+ L +P+ D V+QF+++SSAG+Y+ +
Sbjct: 50 RV---AEQLREKLEKEEFDVIFDNNGRELSDTQPLVDLYNGR-VQQFVYMSSAGVYQASS 105
Query: 196 EPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH E D V P + H + E+Y++++ W + RP Y+ G N E WFFDR+VR
Sbjct: 106 QMPHRETDAVDPQSRHKGKFETERYLAQSGIPWTAIRPTYIYGPHNYNALESWFFDRLVR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
R +PIPG+G T + HV DL+ + + P AA I+N+ DR VT++G+A+ CA
Sbjct: 166 GRAIPIPGNGQYITQLGHVEDLAIAMAKTIVTP-AAIGQIYNISGDRYVTMNGLAQACAT 224
Query: 313 AAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
AAGL V++VHYDPK +KAFP R HF+A+ + A+D L W L E LK
Sbjct: 225 AAGLDPQGVKLVHYDPKDFDFGKRKAFPLRQQHFFADIQKAQDHLDWHPNYGLVEGLKNS 284
Query: 370 FE-EYVKIGRDKKAMQFEIDDKIL 392
F+ +Y+ G+ ++ F++D++IL
Sbjct: 285 FQLDYLPSGKGEEKGDFDLDEQIL 308
>gi|282899647|ref|ZP_06307611.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Cylindrospermopsis
raciborskii CS-505]
gi|281195526|gb|EFA70459.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Cylindrospermopsis
raciborskii CS-505]
Length = 307
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 121/327 (37%), Positives = 179/327 (54%), Gaps = 32/327 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++L++ GG IG YL + L+ +GHEV + FNR N G
Sbjct: 2 RILVI----GGTRFIGVYLTQLLIKAGHEVVL---------------FNRGNHPAPDGVG 42
Query: 136 TVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
+ GD P+++ + +FDV+ DNNG+ L P+A + VK F+++SSAG+Y
Sbjct: 43 QIIGDRTDPSQLSKL-SQESFDVIFDNNGRELTDTEPLAKMFQGR-VKHFVYMSSAGVYL 100
Query: 193 PADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
+D+ PHVEGD V P + H + E ++ + + S RP Y+ G N E WFFDR
Sbjct: 101 KSDQLPHVEGDTVDPKSRHRGKHETESFLQQLGIAFTSIRPTYIYGPKNYNPLESWFFDR 160
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
IVR RP+PIPG+G+ T + HV+DL+ + + N + A I+N+ DR VT DG+A+
Sbjct: 161 IVRDRPIPIPGNGLHITQLGHVQDLAQAMLQVIGN-QTAIGKIYNVSGDRFVTFDGLARA 219
Query: 310 CAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDL 366
CA AAG V+IVHYDPK +KAFP R HF+A A L W+ +L L
Sbjct: 220 CAIAAGKSADSVKIVHYDPKKFDFGKRKAFPMRAQHFFASVNRAITELNWQPQYDLISGL 279
Query: 367 KERFE-EYVKIGRDKKAMQFEIDDKIL 392
++ F+ +Y+ G + + F +DD+IL
Sbjct: 280 QDSFQNDYLTGGAAQGEIDFSVDDEIL 306
>gi|428211961|ref|YP_007085105.1| nucleoside-diphosphate-sugar epimerase [Oscillatoria acuminata PCC
6304]
gi|428000342|gb|AFY81185.1| nucleoside-diphosphate-sugar epimerase [Oscillatoria acuminata PCC
6304]
Length = 306
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 119/316 (37%), Positives = 172/316 (54%), Gaps = 18/316 (5%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG YL K L+ GH V + G+ K P +I G +T D +++
Sbjct: 3 GGTRFIGVYLTKILVEQGHSVVLFNRGN------KPAPVEGVEQI--HGDRT---DESQL 51
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
+ FD + DNNG+ L +P+AD K VK F+++SSAG+Y +D+ PH E D
Sbjct: 52 KEKLASEQFDAIFDNNGRELSDTKPLADLFKGK-VKHFVYMSSAGVYLKSDQMPHREEDA 110
Query: 205 VKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS 261
V P + H E Y+S+ + S RP Y+ G N E WFFDRIVR RP+PIPG+
Sbjct: 111 VDPKSRHKGKNDTEIYLSQQGLPFTSIRPTYIYGPQNYNPLEGWFFDRIVRDRPIPIPGN 170
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEI 320
G T + H DL++ + + N E A I+N+ DR VT DG+A+ CA+AAG V++
Sbjct: 171 GFHITQLGHCYDLANAMAAVLGN-ETAIGQIYNISGDRYVTFDGLARACAEAAGKADVKL 229
Query: 321 VHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRD 379
+HYDPK +KAFP R HF+A+ A L W+ +L LK+ F+ +Y+ G
Sbjct: 230 IHYDPKQFDFGKRKAFPMRVQHFFADVSKAMQDLNWQPKFDLVSGLKDSFQNDYLANGSH 289
Query: 380 KKAMQFEIDDKILESL 395
K + F +DD+I+ +
Sbjct: 290 KAEIDFSVDDEIINQV 305
>gi|425463625|ref|ZP_18842955.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
gi|389830819|emb|CCI26921.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
Length = 316
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 121/324 (37%), Positives = 176/324 (54%), Gaps = 24/324 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG IG L K L+ GHEV + G+ K P +I G +
Sbjct: 5 KILIM----GGTRFIGVSLTKVLVEQGHEVVLFNRGN------KPAPVAGVRQI--HGDR 52
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T DPA++ + +F+ + DNNG+ L +P+ + + F+++SSAG+Y +D
Sbjct: 53 T---DPAQLKEKLKNESFEAIFDNNGRELSDTQPLVQIFRER-IGHFVYVSSAGVYLKSD 108
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH EGD + P + H + E Y+SE W S RP Y+ G GN D E WFFDR+VR
Sbjct: 109 QMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPGNYNDLEAWFFDRLVR 168
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG G FT HV DL+ + + N +A ++N+ DR VT +G+AK C
Sbjct: 169 NRPIPIPGHGEHFTQFGHVVDLAKAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAKACTA 227
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
A G +EIV+Y+PK KK FP R HFYA+ A L W+ +L L +
Sbjct: 228 AMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHFYADINKATRELNWQPEYDLVSGLTDS 287
Query: 370 FE-EYVKIGRDKKAMQFEIDDKIL 392
F+ +Y+ GRD++ + + IDD+IL
Sbjct: 288 FQNDYLPSGRDRQEIDWAIDDQIL 311
>gi|388497252|gb|AFK36692.1| unknown [Medicago truncatula]
Length = 378
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/332 (37%), Positives = 179/332 (53%), Gaps = 18/332 (5%)
Query: 70 SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
SA+ KK+LI+ GG IG +L+++L+ GH+VT+ T G + ++ P +
Sbjct: 49 SASSTKKILIM----GGTRFIGVFLSRQLVKEGHQVTLFTRG--KAPITQQLPGESDTDF 102
Query: 130 VSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
K + GD + V ++ FDVV D NG+ + V P+ D + ++QF++
Sbjct: 103 ADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPN--LEQFIY 160
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKD 241
SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G N
Sbjct: 161 CSSAGVYLKSDLLPHAEIDAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNP 220
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
EEWFF R+ RP+PIPGSG+Q T + HV+DL++ L V E AS IFN+ D+ V
Sbjct: 221 VEEWFFHRLKAGRPIPIPGSGIQITQLGHVKDLATAF-LKVLGNEKASKQIFNISGDKYV 279
Query: 302 TLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
T DG+A+ CA+A G P EI+HY+PK KK+FPFR+ HF+A AK +LG
Sbjct: 280 TFDGLARACAKAGGFPEPEIIHYNPKDFDFGKKKSFPFRDQHFFASVEKAKSVLGLEPDY 339
Query: 361 NLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
L E L + + G +K F DD IL
Sbjct: 340 GLVEGLTDSYNLDFGRGTFRKEADFSTDDIIL 371
>gi|15217485|ref|NP_172405.1| RNA binding protein [Arabidopsis thaliana]
gi|75313128|sp|Q9SA52.1|CP41B_ARATH RecName: Full=Chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic; Short=CSP41-b; AltName:
Full=Heteroglycan-interacting protein 1.3; AltName:
Full=Protein CHLOROPLAST RNA BINDING; AltName:
Full=Protein Gb5f; Flags: Precursor
gi|11762234|gb|AAG40395.1|AF325043_1 At1g09340 [Arabidopsis thaliana]
gi|16226247|gb|AAL16114.1|AF428282_1 At1g09340/T31J12_6 [Arabidopsis thaliana]
gi|4337177|gb|AAD18098.1| Identical to gb|Y10557 g5bf gene from Arabidopsis thaliana. ESTs
gb|R30578, gb|R90475, gb|T22384, gb|T22425, gb|N64934
and gb|T46767 come from this gene [Arabidopsis thaliana]
gi|14334754|gb|AAK59555.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|17979099|gb|AAL47493.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332190310|gb|AEE28431.1| RNA binding protein [Arabidopsis thaliana]
Length = 378
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/332 (37%), Positives = 180/332 (54%), Gaps = 18/332 (5%)
Query: 70 SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
SA+ +KK+LI+ GG IG +L++ L+ GH+VT+ T G S K+ P +
Sbjct: 49 SASSEKKILIM----GGTRFIGLFLSRILVKEGHQVTLFTRG--KSPIAKQLPGESDQDF 102
Query: 130 VSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
K + GD + V ++ FDVV D NG+ + V P+ + ++Q+++
Sbjct: 103 ADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPK--LEQYIY 160
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKD 241
SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G N
Sbjct: 161 CSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNP 220
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
EEWFF R+ RP+P+P SG+Q + + HV+DL++ L V E AS IFN+ ++ V
Sbjct: 221 VEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LNVLGNEKASREIFNISGEKYV 279
Query: 302 TLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
T DG+AK CA+A G P EIVHY+PK KKAFPFR+ HF+A AK +LGW+
Sbjct: 280 TFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEF 339
Query: 361 NLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
+L E L + + G +K F DD IL
Sbjct: 340 DLVEGLTDSYNLDFGRGTFRKEADFTTDDMIL 371
>gi|297843724|ref|XP_002889743.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335585|gb|EFH66002.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/335 (37%), Positives = 180/335 (53%), Gaps = 18/335 (5%)
Query: 67 VKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF 126
+ SA+ +KK+LI+ GG IG +L++ L+ GH+VT+ T G S K+ P
Sbjct: 46 LHVSASSEKKILIM----GGTRFIGVFLSRLLVKGGHQVTLFTRG--KSPIAKQLPGESD 99
Query: 127 NEIVSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQ 181
+ K + GD + V ++ FDVV D NG+ + V P+ D ++Q
Sbjct: 100 QDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPK--LEQ 157
Query: 182 FLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGN 238
+++ SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G N
Sbjct: 158 YIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLN 217
Query: 239 NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
EEWFF R+ RP+P+P SG+Q + + HV+DL + L V E AS IFN+ +
Sbjct: 218 YNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLGTAF-LNVLGNEKASREIFNISGE 276
Query: 299 RAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWR 357
+ VT DG+AK CA+A G P EIVHY+PK KKAFPFR+ HF+A AK +LGW+
Sbjct: 277 KYVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWK 336
Query: 358 STTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
+L E L + + G +K F DD +L
Sbjct: 337 PEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMVL 371
>gi|255542956|ref|XP_002512541.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
gi|223548502|gb|EEF49993.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
Length = 381
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/344 (36%), Positives = 183/344 (53%), Gaps = 18/344 (5%)
Query: 58 RRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK 117
RR + ++ +A+ K +LI+ GG IG +L++ L+ GH+VT+ T G +
Sbjct: 39 RRVWQAKGALQVTASSSKNILIM----GGTRFIGVFLSRLLVKEGHQVTLFTRG--KAPI 92
Query: 118 MKKPPFNRFNEIVSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVAD 172
+K P + K + GD + V ++ FDVV D NG+ D V P+ D
Sbjct: 93 TQKLPGESDQDYADFSSKVLHLKGDRKDFDFVKSSLSAKGFDVVYDINGREADEVAPILD 152
Query: 173 WAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFR 229
+ ++QF++ SSAG+Y +D PH E D V P + H ++ E + + NW S R
Sbjct: 153 ALPN--LEQFIYCSSAGVYLKSDLLPHSEKDAVDPKSRHKGKLETESLLESSGVNWTSIR 210
Query: 230 PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
P Y+ G N EEWFF R+ RP+PIP SG+Q T + HV+DL+ + N E AS
Sbjct: 211 PVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFIQVLGN-EKAS 269
Query: 290 SNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPR 348
+FN+ ++ VT DG+A+ CA+A G P EIVHY+PK KKAFPFR+ HF+A
Sbjct: 270 KQVFNISGEKYVTFDGLARACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVD 329
Query: 349 AAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
AK +LGW +L E L + + G +K F DD IL
Sbjct: 330 KAKHVLGWEPEFDLVEGLADSYNLDFGRGTFRKEADFTTDDMIL 373
>gi|3850621|emb|CAA75602.1| putative RNA binding protein [Arabidopsis thaliana]
Length = 374
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/332 (37%), Positives = 180/332 (54%), Gaps = 18/332 (5%)
Query: 70 SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
SA+ +KK+LI+ GG IG +L++ L+ GH+VT+ T G S K+ P +
Sbjct: 45 SASSEKKILIM----GGTRFIGLFLSRILVKEGHQVTLFTRG--KSPIAKQLPGESDQDF 98
Query: 130 VSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
K + GD + V ++ FDVV D NG+ + V P+ + ++Q+++
Sbjct: 99 ADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPK--LEQYIY 156
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKD 241
SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G N
Sbjct: 157 CSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNP 216
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
EEWFF R+ RP+P+P SG+Q + + HV+DL++ L V E AS IFN+ ++ V
Sbjct: 217 VEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LNVLGNEKASREIFNISGEKYV 275
Query: 302 TLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
T DG+AK CA+A G P EIVHY+PK KKAFPFR+ HF+A AK +LGW+
Sbjct: 276 TFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEF 335
Query: 361 NLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
+L E L + + G +K F DD IL
Sbjct: 336 DLVEGLTDSYNLDFGRGTFRKEADFTTDDMIL 367
>gi|428781551|ref|YP_007173337.1| nucleoside-diphosphate-sugar epimerase [Dactylococcopsis salina PCC
8305]
gi|428695830|gb|AFZ51980.1| nucleoside-diphosphate-sugar epimerase [Dactylococcopsis salina PCC
8305]
Length = 311
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/331 (37%), Positives = 179/331 (54%), Gaps = 32/331 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG- 134
K+LI+ GG IG L K L+ GH++T+ FNR N G
Sbjct: 2 KILIM----GGTRFIGVALTKILVEQGHKITL---------------FNRGNNPSPVEGV 42
Query: 135 KTVWGDPAEVGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
KT+ GD + + + TFD + DNNG+ L +P+ + K ++ F+++SSAG+Y
Sbjct: 43 KTINGDRKDADQLKEKLATETFDAIFDNNGRELSDTQPLVELFKDK-IQHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ PH E D + P + H E Y+SE W S RP Y+ G+GN D E WFFD
Sbjct: 102 LKSDQMPHYEADAIDPKSRHKGKHDTETYLSEMGMPWTSVRPVYIYGAGNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RIVR R VPIPG G T ++HV+DL+ + + N A ++N+ +R VT +G+A+
Sbjct: 162 RIVRDRAVPIPGHGEHITQLSHVQDLAYAMASILGNKNAIGQ-VYNISGERYVTFNGIAR 220
Query: 309 LCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
CA+A G +++VHY+PK KK FP R HF+A+ AK L W+ +L
Sbjct: 221 ACAKAIGKSPDDLKLVHYNPKDFDFGKKKPFPLRMQHFFADISKAKTDLQWQPQYDLISG 280
Query: 366 LKERFE-EYVKIGRDKKAMQFEIDDKILESL 395
LKE FE +Y+ R + + F +DD+IL SL
Sbjct: 281 LKESFEKDYLVQNRHEAEIDFSVDDEILSSL 311
>gi|425437767|ref|ZP_18818182.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|389677230|emb|CCH93825.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
Length = 311
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/328 (37%), Positives = 177/328 (53%), Gaps = 32/328 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGG 134
K+LI+ GG IG L K L+ GHEV + FNR N+ AG
Sbjct: 2 KILIM----GGTRFIGVSLTKVLVEQGHEVVL---------------FNRGNKPAPVAGV 42
Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD P ++ + +F+ + DNNG+ L +P+ + S ++ F+++SSAG+Y
Sbjct: 43 RQIHGDRTDPGQLKEKLKNESFEAIFDNNGRELSDTQPLVEIF-SDRIEHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ PH EGD + P + H + E Y+SE W S RP Y+ G N D E WFFD
Sbjct: 102 LKSDQMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPRNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
R+VR RP+PIPG G FT HV DL+ + + N +A ++N+ DR VT +G+AK
Sbjct: 162 RLVRNRPIPIPGHGEHFTQFGHVADLAKAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAK 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
CA A G +EIV+Y+PK KK FP R HFYA+ A L W+ +L
Sbjct: 221 ACAAAMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHFYADINKATRELNWQPEYDLVSG 280
Query: 366 LKERFE-EYVKIGRDKKAMQFEIDDKIL 392
L + F+ +Y+ GRD++ + IDD+IL
Sbjct: 281 LTDSFQNDYLASGRDRQEIDLAIDDQIL 308
>gi|449457309|ref|XP_004146391.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic-like [Cucumis sativus]
gi|449480815|ref|XP_004156003.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic-like [Cucumis sativus]
Length = 383
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/370 (35%), Positives = 194/370 (52%), Gaps = 19/370 (5%)
Query: 33 FSSYSHL-SSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIG 91
F+S+S L SSL + + A R+ + +A+ KK +LI+ GG IG
Sbjct: 15 FTSFSVLPSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNILIM----GGTRFIG 70
Query: 92 FYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GDPAE---VGN 146
+L++ L+ GH+VT+ T G + ++ P + K + GD + V +
Sbjct: 71 IFLSRLLVKEGHQVTLFTRG--KAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVKS 128
Query: 147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK 206
+ FDVV D NG+ D V P+ D ++QF++ SSAG+Y +D PH E D V
Sbjct: 129 SLSAAGFDVVYDINGREADEVEPIIDALPK--LEQFIYCSSAGVYLKSDLLPHFEVDAVD 186
Query: 207 PDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM 263
P + H ++ E ++ NW S RP Y+ G N EEWFF R+ RP+PIP SG+
Sbjct: 187 PKSRHKGKLETESLLASKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGI 246
Query: 264 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVH 322
Q T + HV+DL++ + N + AS +FN+ ++ V+ DG+AK CA+A G P EIVH
Sbjct: 247 QITQLGHVKDLANAFVQVLGN-DKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEIVH 305
Query: 323 YDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKA 382
Y+PK KK FPFR+ HF+A AK +LGW+ +L E L + + G +K
Sbjct: 306 YNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKE 365
Query: 383 MQFEIDDKIL 392
F DD IL
Sbjct: 366 ADFSTDDIIL 375
>gi|428173772|gb|EKX42672.1| hypothetical protein GUITHDRAFT_73722 [Guillardia theta CCMP2712]
Length = 322
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/320 (38%), Positives = 178/320 (55%), Gaps = 11/320 (3%)
Query: 78 LIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV 137
LIV GGH IGF+LA++L G +VT++ +++ KM+K PF + EI + G + +
Sbjct: 5 LIVQNKGGGHGEIGFHLARQLRSKGLDVTLL---QDSAAKMEKLPFKNYGEIEAEGVEII 61
Query: 138 ---WGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG-VKQFLFISSAGIYKP 193
DP+ + + + G +F V DN K+ V VA AK++ VK + ++SSAG+Y+
Sbjct: 62 SCNLEDPSRILSSLSGKSFTHVFDNYAKD-KTVSTVAGLAKNTWRVKNYAYVSSAGMYES 120
Query: 194 ADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVR 252
+ P VE K G VE++++ W SFRPQY+ G NK D +WFF RI R
Sbjct: 121 SVPQPMVETGATKA-TGQRAVEEFLASQELPWTSFRPQYIYGPYTNKRDYLDWFFHRITR 179
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP P+PG G Q ++ V D+++ML V +AA +FN +D V+ + ++ Q
Sbjct: 180 DRPCPLPGDGNQMASVTRVEDVAAMLASVVGKEDAAKGQVFNCGTDNMVSYRQICEMIGQ 239
Query: 313 AAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE 372
G +IV Y+PK+ + K AFPFRN F P AK +LGW +L EDL FE
Sbjct: 240 VVGKSPKIVTYNPKSFEL-PKGAFPFRNTEFCVTPEKAKKVLGWSRKHSLSEDLPWYFES 298
Query: 373 YVKIGRDKKAMQFEIDDKIL 392
Y G + KAM+FE D+ IL
Sbjct: 299 YKAAGLEGKAMEFEADEIIL 318
>gi|390439289|ref|ZP_10227696.1| conserved hypothetical protein [Microcystis sp. T1-4]
gi|389837320|emb|CCI31820.1| conserved hypothetical protein [Microcystis sp. T1-4]
Length = 314
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 121/324 (37%), Positives = 175/324 (54%), Gaps = 24/324 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG IG L K L+ GHEV + G+ K P +I G +
Sbjct: 5 KILIM----GGTRFIGVSLTKVLVEQGHEVVLFNRGN------KPAPVAGVRQI--HGDR 52
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T DPA++ + +F+ + DNNG+ L +P+ + + F+++SSAG+Y +D
Sbjct: 53 T---DPAQLKEKLKNESFEAIFDNNGRELRDTQPLVEIFGDR-IGHFVYVSSAGVYLKSD 108
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH EGD + P + H + E Y+SE W S RP Y+ G GN D E WFFDR+VR
Sbjct: 109 QMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPGNYNDLEAWFFDRLVR 168
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIP G FT HV DL+ + + N +A ++N+ DR VT +G+AK CA
Sbjct: 169 NRPIPIPSHGEHFTQFGHVVDLARAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAKACAA 227
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
A G +EIV+Y+PK KK FP R HFYA+ A L W+ +L L +
Sbjct: 228 AMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHFYADINKATRELNWQPEYDLVSGLTDS 287
Query: 370 FE-EYVKIGRDKKAMQFEIDDKIL 392
F+ +Y+ GRD++ + IDD+IL
Sbjct: 288 FQNDYLAAGRDRQEIDLAIDDQIL 311
>gi|2765081|emb|CAA71589.1| g5bf [Arabidopsis thaliana]
Length = 378
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/332 (37%), Positives = 179/332 (53%), Gaps = 18/332 (5%)
Query: 70 SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
SA+ +KK+LI+ GG IG +L++ L+ GH+VT+ T G S K+ P +
Sbjct: 49 SASSEKKILIM----GGTRFIGLFLSRILVKEGHQVTLFTRG--KSPIAKQLPGESDQDF 102
Query: 130 VSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
K + GD + V ++ FDVV D NG+ + V P+ + ++Q+++
Sbjct: 103 ADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPK--LEQYIY 160
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKD 241
SSAG+Y D PH E D V P + H ++ E + NW S RP Y+ G N
Sbjct: 161 CSSAGVYLKFDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNP 220
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
EEWFF R+ RP+P+P SG+Q + + HV+DL++ L V E AS IFN+ ++ V
Sbjct: 221 VEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LNVLGNEKASREIFNISGEKYV 279
Query: 302 TLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
T DG+AK CA+A G P EIVHY+PK KKAFPFR+ HF+A AK +LGW+
Sbjct: 280 TFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEF 339
Query: 361 NLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
+L E L + + G +K F DD IL
Sbjct: 340 DLVEGLTDSYNLDFGRGTFRKEADFTTDDMIL 371
>gi|115488340|ref|NP_001066657.1| Os12g0420200 [Oryza sativa Japonica Group]
gi|108862567|gb|ABA97622.2| RNA binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113649164|dbj|BAF29676.1| Os12g0420200 [Oryza sativa Japonica Group]
gi|222616978|gb|EEE53110.1| hypothetical protein OsJ_35887 [Oryza sativa Japonica Group]
Length = 376
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 131/362 (36%), Positives = 191/362 (52%), Gaps = 21/362 (5%)
Query: 43 VSISPSSFLACPASSRRSS---VSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELL 99
+S S+ L+ +RR S A A+AA+ K +L++ GG IG +L++ L+
Sbjct: 17 ISDFSSAALSISTQARRRSWQPRGARMQVAAAADSKNILVM----GGTRFIGVFLSRLLV 72
Query: 100 GSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GDPAE---VGNVVGGVTFD 154
GH+VT+ T G + ++ P E K + GD + V + FD
Sbjct: 73 KEGHQVTLFTRG--KAPITQQLPGESDAEYAEFSSKVLHLKGDRQDFDFVKTSLAAKGFD 130
Query: 155 VVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH--- 211
VV D NG+ V P+ D + ++Q+++ SSAG+Y +D PH E D V P + H
Sbjct: 131 VVYDINGREAVEVAPILDALPN--LEQYIYCSSAGVYLKSDLLPHFETDAVDPKSRHKGK 188
Query: 212 VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV 271
++ E + NW S RP Y+ G N EEWFF R+ RP+P+PG+G Q T + HV
Sbjct: 189 LETESLLETRDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPGAGNQITQLGHV 248
Query: 272 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGI 330
+DL++ LA+ NP+ AS +FN+ + VT DG+A+ CA+A G P EIVHY+PK
Sbjct: 249 KDLATAFVLALGNPK-ASKQVFNISGAKYVTFDGLARACAKAGGFPEPEIVHYNPKDFDF 307
Query: 331 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDK 390
KKAFPFR+ HF+A A LGW+ +L E L + + G +KA F DD
Sbjct: 308 GKKKAFPFRDQHFFASIEKATLELGWKPEYDLVEGLTDSYNLDFGRGTFRKAADFTTDDM 367
Query: 391 IL 392
IL
Sbjct: 368 IL 369
>gi|17064988|gb|AAL32648.1| g5bf protein [Arabidopsis thaliana]
Length = 378
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 124/332 (37%), Positives = 180/332 (54%), Gaps = 18/332 (5%)
Query: 70 SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
SA+ +KK+LI+ GG IG +L++ L+ GH+VT+ T G S K+ P +
Sbjct: 49 SASSEKKILIM----GGTRFIGLFLSRILVKEGHQVTLFTRG--KSPIAKQLPGESDQDF 102
Query: 130 VSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
K + GD + V ++ FDVV D NG+ + V P+ + ++Q+++
Sbjct: 103 ADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPK--LEQYIY 160
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKD 241
SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G N
Sbjct: 161 CSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNP 220
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
E+WFF R+ RP+P+P SG+Q + + HV+DL++ L V E AS IFN+ ++ V
Sbjct: 221 VEKWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LNVLGNEKASREIFNISGEKYV 279
Query: 302 TLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
T DG+AK CA+A G P EIVHY+PK KKAFPFR+ HF+A AK +LGW+
Sbjct: 280 TFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEF 339
Query: 361 NLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
+L E L + + G +K F DD IL
Sbjct: 340 DLVEGLTDSYNLDFGRGTFRKEADFTTDDMIL 371
>gi|425450332|ref|ZP_18830162.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
gi|389768887|emb|CCI06125.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
Length = 311
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 120/324 (37%), Positives = 175/324 (54%), Gaps = 24/324 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG IG L K L+ GHEV + G+ K P +I G +
Sbjct: 2 KILIM----GGTRFIGVSLTKVLVEQGHEVVLFNRGN------KPAPVAGVRQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T DP ++ + +F+ + DNNG+ L +P+ + + + F+++SSAG+Y +D
Sbjct: 50 T---DPGQLKEKLENESFEAIFDNNGRELSDTQPLVEIFRDR-IGHFVYVSSAGVYLKSD 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH EGD + P + H + E Y+SE W S RP Y+ G N D E WFFDR+VR
Sbjct: 106 QMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPRNYNDLEAWFFDRLVR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG G FT HV DL+ + + N +A ++N+ DR VT +G+AK CA
Sbjct: 166 NRPIPIPGHGEHFTQFGHVADLAQAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAKACAA 224
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
A G +EIV+Y+PK KK FP R HFYA+ A L W+ +L L +
Sbjct: 225 AMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHFYADINKATRELNWQPEYDLVSGLTDS 284
Query: 370 FE-EYVKIGRDKKAMQFEIDDKIL 392
F+ +Y+ GRD++ + IDD+IL
Sbjct: 285 FQNDYLASGRDRQEIDLAIDDQIL 308
>gi|21593201|gb|AAM65150.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 378
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 124/332 (37%), Positives = 179/332 (53%), Gaps = 18/332 (5%)
Query: 70 SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
SA+ +KK+LI+ GG IG +L++ L+ GH+VT+ T G S K+ P +
Sbjct: 49 SASSEKKILIM----GGTRFIGLFLSRILVKEGHQVTLFTRG--KSPIAKQLPGESDQDF 102
Query: 130 VSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
K + GD + V ++ FDVV D NG+ + V P+ + ++Q+++
Sbjct: 103 ADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPK--LEQYIY 160
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKD 241
SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G N
Sbjct: 161 CSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNP 220
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
EEWFF R+ RP+P+P SG+Q + + HV+DL++ L V E AS IFN+ ++ V
Sbjct: 221 VEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LNVLGNEKASREIFNISGEKYV 279
Query: 302 TLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
T DG+A CA+A G P EIVHY+PK KKAFPFR+ HF+A AK +LGW+
Sbjct: 280 TFDGLAXACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEF 339
Query: 361 NLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
+L E L + + G +K F DD IL
Sbjct: 340 DLVEGLTDSYNLDFGRGTFRKEADFTTDDMIL 371
>gi|359460634|ref|ZP_09249197.1| NAD-dependent epimerase/dehydratase family protein [Acaryochloris
sp. CCMEE 5410]
Length = 312
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 118/319 (36%), Positives = 174/319 (54%), Gaps = 28/319 (8%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGD--- 140
GG IG YL++ L GH+V + FNR N + G T + GD
Sbjct: 7 GGTRFIGIYLSQILADQGHDVVL---------------FNRGNHAPAVAGLTQIQGDRTD 51
Query: 141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
A++ + + FD + DNNG+ L +P+A K V+ F+++SSAG+Y +++ PH
Sbjct: 52 AAQLKSKLAHEKFDAIFDNNGRKLSDTQPLATLFKDQ-VQHFVYMSSAGVYLKSNQMPHR 110
Query: 201 EGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP 257
E D P++ H+ + E ++ + S RP Y+ G N D E WFFDRIVR+RP+P
Sbjct: 111 EDDPTDPNSRHLGKAESEADLAAQGLPFTSIRPTYIYGPKNYNDVEAWFFDRIVRQRPIP 170
Query: 258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL- 316
IPG+G T + HV+DL+ + + NP+A I+N+ DR VT DG+AK CA AAG
Sbjct: 171 IPGNGQHMTQLGHVQDLAQAMASVLGNPQAIGQ-IYNISGDRYVTFDGIAKACALAAGQS 229
Query: 317 --PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EY 373
+ +VHYDP +KAFP R HF+A+ A LGW +L LK+ F+ +Y
Sbjct: 230 PDALRLVHYDPAQFDFGKRKAFPMRLQHFFADIHKACTELGWHPQYDLVSGLKDSFQNDY 289
Query: 374 VKIGRDKKAMQFEIDDKIL 392
+ RD+ + F +DD+IL
Sbjct: 290 LAGQRDQADIDFSLDDQIL 308
>gi|425460465|ref|ZP_18839946.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
gi|389826828|emb|CCI22356.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
Length = 311
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 121/328 (36%), Positives = 176/328 (53%), Gaps = 32/328 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGG 134
K+LI+ GG IG L K L+ GHEV + FNR N+ AG
Sbjct: 2 KILIM----GGTRFIGVSLTKVLVEQGHEVVL---------------FNRGNKPAPVAGV 42
Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD P ++ + +F+ + DNNG+ L +P+ + + + F+++SSAG+Y
Sbjct: 43 RQIHGDRTDPRQLKEKLKNESFEAIFDNNGRELSDTQPLVEIFRDR-IGHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ PH EGD + P + H + E Y+SE W S RP Y+ G N D E WFFD
Sbjct: 102 LKSDQMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPRNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
R+VR RP+PIPG G FT HV DL+ + + N +A ++N+ DR VT +G+AK
Sbjct: 162 RLVRNRPIPIPGHGEHFTQFGHVADLAQAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAK 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
CA A G +EIV+Y+PK KK FP R HFYA+ A L W+ +L
Sbjct: 221 ACAAAMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHFYADINKATRELNWQPEYDLVSG 280
Query: 366 LKERFE-EYVKIGRDKKAMQFEIDDKIL 392
L + F+ +Y+ GRD++ + IDD+IL
Sbjct: 281 LTDSFQNDYLASGRDQQEIDLAIDDQIL 308
>gi|440754856|ref|ZP_20934058.1| hypothetical protein O53_3250 [Microcystis aeruginosa TAIHU98]
gi|440175062|gb|ELP54431.1| hypothetical protein O53_3250 [Microcystis aeruginosa TAIHU98]
Length = 306
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 117/315 (37%), Positives = 170/315 (53%), Gaps = 20/315 (6%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG L K L+ GHEV + G+ K P +I G +T DP ++
Sbjct: 2 GGTRFIGVSLTKVLVEQGHEVVLFNRGN------KPAPVAGVRQI--HGDRT---DPGQL 50
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
+ +F+ + DNNG+ L +P+ + + + F+++SSAG+Y +D+ PH EGD
Sbjct: 51 KEKLKNESFEAIFDNNGRELSDTQPLVEIFRDR-IGHFVYVSSAGVYLKSDQMPHKEGDK 109
Query: 205 VKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS 261
+ P + H + E Y+SE W S RP Y+ G N D E WFFDR+VR RP+PIPG
Sbjct: 110 LDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPRNYNDLEAWFFDRLVRNRPIPIPGH 169
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PV 318
G FT HV DL+ + + N +A ++N+ DR VT +G+AK CA A G +
Sbjct: 170 GEHFTQFGHVADLAQAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAKACAAAMGKNAEEI 228
Query: 319 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIG 377
EIV+Y+PK KK FP R HFYA+ A L W+ +L L + F+ +Y+ G
Sbjct: 229 EIVNYNPKKFDFGKKKPFPLRVQHFYADINKATRELNWQPEYDLVSGLTDSFQNDYLASG 288
Query: 378 RDKKAMQFEIDDKIL 392
RD++ + IDD+IL
Sbjct: 289 RDRQEIDLAIDDQIL 303
>gi|118489564|gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 380
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/342 (36%), Positives = 179/342 (52%), Gaps = 14/342 (4%)
Query: 58 RRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK 117
RR + ++ SA+ K +LI+ GG IG +L++ L+ GH+VT+ T G +
Sbjct: 38 RRVWQTKGALQVSASSSKNILIM----GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQ 93
Query: 118 MKKPPFNRFNEIVSAGGKTVWGDPAE---VGNVVGGVTFDVVLDNNGKNLDAVRPVADWA 174
++ S+ + GD + V + FDVV D NG+ V P+ D
Sbjct: 94 QLPGESDQDYSDFSSKILHLKGDRKDFEFVKTSLAAKGFDVVYDINGREAVEVEPILDAL 153
Query: 175 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQ 231
++QF++ SSAG+Y +D PH E D V P + H ++ E + NW S RP
Sbjct: 154 PK--LEQFIYCSSAGVYLKSDLLPHSEKDAVDPKSRHKGKLETESLLESRGVNWTSIRPV 211
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
Y+ G N EEWFF R+ RP+PIP SG+Q T + HV+DL+ + N E AS
Sbjct: 212 YIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQMTQLGHVKDLAKAFIQVLGN-EKASQQ 270
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAA 350
+FN+ ++ VT DG+AK CA+AAG P EIVHY+PK KKAFPFR+ HF+A A
Sbjct: 271 VFNISGEKYVTFDGLAKACAKAAGFPEPEIVHYNPKDFDFGKKKAFPFRDQHFFASIDKA 330
Query: 351 KDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
K +LGW +L E L + + G +K F DD IL
Sbjct: 331 KHVLGWEPEFDLVEGLADSYNLDFGRGTYRKEADFFTDDLIL 372
>gi|428226603|ref|YP_007110700.1| NAD-dependent epimerase/dehydratase [Geitlerinema sp. PCC 7407]
gi|427986504|gb|AFY67648.1| NAD-dependent epimerase/dehydratase [Geitlerinema sp. PCC 7407]
Length = 311
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/328 (37%), Positives = 185/328 (56%), Gaps = 32/328 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGG 134
++LI+ GG IG YL + L+ GHEV + FNR N+ AG
Sbjct: 2 RILIM----GGTRFIGVYLTRILVEQGHEVVL---------------FNRGNKPAPVAGV 42
Query: 135 KTVWGDPAEVGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD + G + + G +FD V DNNG+ L +P+ + + ++ F+++SSAG+Y
Sbjct: 43 QQIQGDRTDAGQLKEKLAGESFDAVFDNNGRELSDTQPLVEIFQDR-LQHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+ +D+ PHVEGD V P + H + E Y++ + S RP Y+ G N E WFFD
Sbjct: 102 QKSDQMPHVEGDAVDPKSRHRGKFETEDYLATQGVPFTSIRPVYIYGPQNYNPLESWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RIVR RPVPIPG+G T + HV+DL+ + + N +A I+N+ DRAVT DG+A+
Sbjct: 162 RIVRDRPVPIPGNGAHLTQLGHVQDLAKAMAAVLGNSQAI-GQIYNISGDRAVTFDGLAR 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
CA AAG +++VHYDPKA +KAFP R HF+ AK LGW+ +L
Sbjct: 221 ACAAAAGKDPGTLDLVHYDPKAFDFGKRKAFPMRVQHFFTSIDKAKHELGWQPEFDLVGG 280
Query: 366 LKERFEE-YVKIGRDKKAMQFEIDDKIL 392
L++ F++ Y+ +D++ + F D++I+
Sbjct: 281 LRDSFQQDYLATHQDQREVDFSTDEEIV 308
>gi|388512335|gb|AFK44229.1| unknown [Medicago truncatula]
Length = 378
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/332 (37%), Positives = 177/332 (53%), Gaps = 18/332 (5%)
Query: 70 SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
SA+ KK+LI+ GG IG +L+++L+ GH+VT+ T G + ++ P +
Sbjct: 49 SASSTKKILIM----GGTRFIGVFLSRQLVKEGHQVTLFTRG--KAPITQQLPGESDTDF 102
Query: 130 VSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
K + GD + V ++ FDVV D NG+ + V P+ D + ++QF++
Sbjct: 103 ADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPN--LEQFIY 160
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKD 241
SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G N
Sbjct: 161 CSSAGVYLKSDLLPHAEIDAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNP 220
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
EEWFF R+ RP+PIPGSG+Q T + HV+DL++ L V E AS IFN+ D+ V
Sbjct: 221 VEEWFFHRLKAGRPIPIPGSGIQITQLGHVKDLATAF-LKVLGNEKASKQIFNISGDKYV 279
Query: 302 TLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
T DG+A+ C +A G P EI+HY+PK KK+FPFR+ HF+A AK +LG
Sbjct: 280 TFDGLARACVKAGGFPEPEIIHYNPKDFDFGKKKSFPFRDQHFFASVEKAKSVLGLEPDY 339
Query: 361 NLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
L E + + G +K F DD IL
Sbjct: 340 GLVEGFTDSYNLGFGRGTFRKEGDFSTDDIIL 371
>gi|254413469|ref|ZP_05027239.1| 3-beta hydroxysteroid dehydrogenase/isomerase family
[Coleofasciculus chthonoplastes PCC 7420]
gi|196179576|gb|EDX74570.1| 3-beta hydroxysteroid dehydrogenase/isomerase family
[Coleofasciculus chthonoplastes PCC 7420]
Length = 311
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/328 (36%), Positives = 177/328 (53%), Gaps = 32/328 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG- 134
++LI+ GG IG YL K L+ GHEV + FNR N+ G
Sbjct: 2 RILIM----GGTRFIGVYLTKILVEQGHEVVL---------------FNRGNKPAPVEGV 42
Query: 135 KTVWGDPAEVGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD + + + G FD + DNNG+ L +P+ + K V+ F+++SSAG+Y
Sbjct: 43 QQIHGDRKDATQLKEKLSGEAFDAIFDNNGRELSDTQPLVEIFKDK-VQHFVYMSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ PHVEGD V P + H + E Y+ + + RP Y+ G N D E WFFD
Sbjct: 102 LQSDQMPHVEGDPVDPKSRHKGKHETEAYLQAQGIPFTAIRPTYIYGPQNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RIVR RP+ IP SG+ T + H +DL+ ++L + N +A ++N+ DR VT DG+A
Sbjct: 162 RIVRDRPLLIPSSGLYITQLGHCKDLARAMSLVLGNQQAI-GQVYNVSGDRYVTFDGLAN 220
Query: 309 LCAQAAGLPVE---IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
C AAG E ++HY+PK +KAFP R HF+A+ + AK L W +L
Sbjct: 221 ACIVAAGKSPEDFDLLHYNPKKFDFGKRKAFPLRTQHFFADVQKAKTQLKWEPEYDLISG 280
Query: 366 LKERFE-EYVKIGRDKKAMQFEIDDKIL 392
LK+ F+ +Y+ GR + + F +DD+IL
Sbjct: 281 LKDSFQNDYLASGRHEAEVDFSLDDQIL 308
>gi|302801426|ref|XP_002982469.1| hypothetical protein SELMODRAFT_228849 [Selaginella moellendorffii]
gi|300149568|gb|EFJ16222.1| hypothetical protein SELMODRAFT_228849 [Selaginella moellendorffii]
Length = 371
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/355 (35%), Positives = 185/355 (52%), Gaps = 17/355 (4%)
Query: 53 CPASSRRSSVSAFTVKAS--AAEK-KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT 109
C RR KAS A E+ KK+L++ GG IG YLA+ L+ +GHEV++ T
Sbjct: 20 CRNPWRRRPQGVVNTKASLGAPERAKKILMM----GGSRFIGVYLARTLVKAGHEVSLFT 75
Query: 110 VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE---VGNVVGGVTFDVVLDNNGKNLDA 166
G + N K + GD + + + +G F+VV D NG+
Sbjct: 76 RGKTPITQQLAGESNEAYAEYQLRVKHIQGDRQDFEALKSKIGEAGFEVVYDINGREAAE 135
Query: 167 VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFS 223
V P+ D ++Q+++ SSAG+Y +D PH E D V P + H + E + +
Sbjct: 136 VEPIVDALPD--LQQYIYCSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLDTESLLQDKGV 193
Query: 224 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
W S RP Y+ G N EEWFF R+ RP+P+PGSG+Q T + HV+DL+ ++
Sbjct: 194 TWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPGSGLQITQLGHVKDLADAFVKVMD 253
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP-VEIVHYDPKAAGIDAKKAFPFRNMH 342
NP+A + +FN+ + VT DG+A+ CA+A G P EIVHY+PK KKAFP R+ H
Sbjct: 254 NPKAF-NQVFNISGSKYVTFDGIARACAKAGGFPDPEIVHYNPKNFDFGKKKAFPLRDQH 312
Query: 343 FYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKV 397
F+A AK L W NL + L++ +E G+ +K F D+ IL + +V
Sbjct: 313 FFASIDKAKQELDWTPRFNLVDGLRDSYELDFGRGKFRKEADFSTDEMILSAGRV 367
>gi|302798457|ref|XP_002980988.1| hypothetical protein SELMODRAFT_178601 [Selaginella moellendorffii]
gi|300151042|gb|EFJ17689.1| hypothetical protein SELMODRAFT_178601 [Selaginella moellendorffii]
Length = 371
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/355 (35%), Positives = 185/355 (52%), Gaps = 17/355 (4%)
Query: 53 CPASSRRSSVSAFTVKAS--AAEK-KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT 109
C R T KAS A E+ KK+L++ GG IG YLA+ L+ +GHEV++ T
Sbjct: 20 CRNPWHRRPQGVVTTKASLGAPERAKKILMM----GGSRFIGVYLARTLVKAGHEVSLFT 75
Query: 110 VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE---VGNVVGGVTFDVVLDNNGKNLDA 166
G + N K + GD + + + +G F+VV D NG+
Sbjct: 76 RGKTPITQQLAGESNEAYAEYQLRVKHIQGDRQDFEALKSKIGEAGFEVVYDINGREAAE 135
Query: 167 VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFS 223
V P+ D ++Q+++ SSAG+Y +D PH E D V P + H + E + +
Sbjct: 136 VEPIVDALPD--LQQYIYCSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLDTESLLQDKGV 193
Query: 224 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
W S RP Y+ G N EEWFF R+ RP+P+PGSG+Q T + HV+DL+ ++
Sbjct: 194 TWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPGSGLQITQLGHVKDLADAFVKVMD 253
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP-VEIVHYDPKAAGIDAKKAFPFRNMH 342
NP+A + +FN+ + VT DG+A+ CA+A G P EIVHY+PK KKAFP R+ H
Sbjct: 254 NPKAF-NQVFNISGSKYVTFDGIARACAKAGGFPDPEIVHYNPKNFDFGKKKAFPLRDQH 312
Query: 343 FYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKV 397
F+A AK L W NL + L++ +E G+ +K F D+ IL + +V
Sbjct: 313 FFASIDKAKQELDWTPRFNLVDGLRDSYELDFGRGKFRKEADFSTDEMILSAGRV 367
>gi|302792238|ref|XP_002977885.1| hypothetical protein SELMODRAFT_107618 [Selaginella moellendorffii]
gi|300154588|gb|EFJ21223.1| hypothetical protein SELMODRAFT_107618 [Selaginella moellendorffii]
Length = 358
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 180/348 (51%), Gaps = 16/348 (4%)
Query: 62 VSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKK 120
VS T +S KK+L++ GG IG YLA+ L+ +GHEVT+ T G + K+
Sbjct: 17 VSIVTTASSDTPTKKILMM----GGTRFIGVYLARLLVKAGHEVTLFTRGKTPVTQKIAS 72
Query: 121 PPFNRFNEIVSAGGKTVWGDPAEVGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSS 177
+ E S+ K + GD + + + F++V D NG+ V P+ D S
Sbjct: 73 ETDQEYAE-YSSKVKHIQGDRQDFDGMKSKIASAGFEIVYDINGREAVEVEPIIDAIPS- 130
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMI 234
+KQ+++ SSAG+Y +D PH E D P + H + E + W S RP Y+
Sbjct: 131 -LKQYIYCSSAGVYLKSDLLPHFEVDATDPKSRHKGKLDTEALLQSKGVPWTSIRPVYIY 189
Query: 235 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
G N EEWFF R+ RP+PIP SG+Q T + HV+DL+ ++NP A ++N
Sbjct: 190 GPLNYNPVEEWFFHRLKAGRPIPIPNSGLQITQLGHVKDLADAFVRVLDNP-TAFGQVYN 248
Query: 295 LVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI 353
+ + VT G+A+ CA+A G P E+VHY+PK KK+FP R+ HF+ AK+
Sbjct: 249 ISGAKYVTFAGIARACAKAGGFPTPELVHYNPKDFDFGKKKSFPLRDQHFFTSIEKAKND 308
Query: 354 LGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIPV 401
LGW L + L + + +G +KA F DD ILE L + + V
Sbjct: 309 LGWSPKYGLVDGLTDSYNLDFGLGTFRKAADFSTDDMILEKLGIKVAV 356
>gi|158337073|ref|YP_001518248.1| NAD-dependent epimerase/dehydratase family protein [Acaryochloris
marina MBIC11017]
gi|158307314|gb|ABW28931.1| NAD-dependent epimerase/dehydratase family protein [Acaryochloris
marina MBIC11017]
Length = 312
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/319 (36%), Positives = 172/319 (53%), Gaps = 28/319 (8%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGDPAE 143
GG IG YL++ L+ GH+V + FNR N + G T + GD +
Sbjct: 7 GGTRFIGIYLSRILVDQGHDVVL---------------FNRGNHAPAVAGLTQIQGDRTD 51
Query: 144 VGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
+ + FD + DNNG+ L +P+A K V+ F+++SSAG+Y +++ PH
Sbjct: 52 AAQLKAKLAHEKFDAIFDNNGRKLSDTQPLATLFKDQ-VQHFVYMSSAGVYLKSNQMPHR 110
Query: 201 EGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP 257
E D P++ H+ + E ++ + S RP Y+ G N D E WFFDRIVR+RP+P
Sbjct: 111 EDDPTDPNSRHLGKAESEADLAAQGLPFTSIRPTYIYGPKNYNDVEAWFFDRIVRQRPIP 170
Query: 258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL- 316
IPG+G T + HV+DL+ + + NP+A I+N+ DR VT DG+AK CA AAG
Sbjct: 171 IPGNGQHMTQLGHVQDLAQAMASVLGNPQAIGQ-IYNISGDRYVTFDGIAKACALAAGQS 229
Query: 317 --PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EY 373
+ +VHYDP +KAFP R HF+A+ A L W +L LK+ F+ +Y
Sbjct: 230 SDALRLVHYDPAQFDFGKRKAFPMRLQHFFADIHKACTDLDWHPQYDLVSGLKDSFQNDY 289
Query: 374 VKIGRDKKAMQFEIDDKIL 392
+ RD+ + F +DD+IL
Sbjct: 290 LAGQRDQADIDFSLDDQIL 308
>gi|302795358|ref|XP_002979442.1| hypothetical protein SELMODRAFT_110839 [Selaginella moellendorffii]
gi|300152690|gb|EFJ19331.1| hypothetical protein SELMODRAFT_110839 [Selaginella moellendorffii]
Length = 358
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 180/348 (51%), Gaps = 16/348 (4%)
Query: 62 VSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKK 120
VS T +S KK+L++ GG IG YLA+ L+ +GHEVT+ T G + K+
Sbjct: 17 VSIVTTASSDTPAKKILMM----GGTRFIGVYLARLLVKAGHEVTLFTRGKTPVTQKIAS 72
Query: 121 PPFNRFNEIVSAGGKTVWGDPAEVGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSS 177
+ E S+ K + GD + + + F++V D NG+ V P+ D S
Sbjct: 73 ETDQEYAE-YSSKVKHIQGDRQDFDGMKSKIASAGFEIVYDINGREAVEVEPIIDAIPS- 130
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMI 234
+KQ+++ SSAG+Y +D PH E D P + H + E + W S RP Y+
Sbjct: 131 -LKQYIYCSSAGVYLKSDLLPHFEVDATDPKSRHKGKLDTEALLQSKGVPWTSIRPVYIY 189
Query: 235 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
G N EEWFF R+ RP+PIP SG+Q T + HV+DL+ ++NP A ++N
Sbjct: 190 GPLNYNPVEEWFFHRLKAGRPIPIPNSGLQITQLGHVKDLADAFVRVLDNP-TAFGQVYN 248
Query: 295 LVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI 353
+ + VT G+A+ CA+A G P E+VHY+PK KK+FP R+ HF+ AK+
Sbjct: 249 ISGAKYVTFAGIARACAKAGGFPTPELVHYNPKDFDFGKKKSFPLRDQHFFTSIEKAKND 308
Query: 354 LGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIPV 401
LGW L + L + + +G +KA F DD ILE L + + V
Sbjct: 309 LGWSPKYGLVDGLTDSYNLDFGLGTFRKAADFSTDDMILEKLGIKVAV 356
>gi|427420133|ref|ZP_18910316.1| nucleoside-diphosphate-sugar epimerase [Leptolyngbya sp. PCC 7375]
gi|425762846|gb|EKV03699.1| nucleoside-diphosphate-sugar epimerase [Leptolyngbya sp. PCC 7375]
Length = 300
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/316 (36%), Positives = 174/316 (55%), Gaps = 22/316 (6%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG YL + LL +GH VT++ G+ P E+V K+ P ++
Sbjct: 2 GGTRFIGVYLTRLLLAAGHRVTLLNRGNR--------PAPDGVEVVRCDRKS----PEDL 49
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
+ G TFD + DNNG+ L +P+ + + V+QF+++SSAG+Y +++ PHVEGD
Sbjct: 50 KAALAGKTFDAIYDNNGRELGDTQPLVELFGGT-VQQFIYVSSAGVYLKSEQMPHVEGDP 108
Query: 205 VKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS 261
V P + H E Y+ E + + RP Y+ G N E+WFFDRI RP+PIPG+
Sbjct: 109 VDPSSRHKGKHHTEDYLIEQGVPFTAIRPVYIYGPQNYNPLEKWFFDRISHDRPLPIPGN 168
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EI 320
G T + H DL+ + + NP+A ++N+ +R VT DG+A CA+A G PV +I
Sbjct: 169 GKAITQLGHCEDLAQAMVSVLGNPKAI-GQVYNISGERYVTFDGLAHACAEAMGKPVPDI 227
Query: 321 VHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRD 379
HYDP +KAFP R HF+ A+ LGW +L LK+ ++ +Y +
Sbjct: 228 RHYDPSQFDFGKRKAFPMRVQHFFTSIGKAQSDLGWTPKYSLVNGLKDSYQNDYCQ---S 284
Query: 380 KKAMQFEIDDKILESL 395
++A+ FE+DD+IL S+
Sbjct: 285 EQAVDFELDDQILTSV 300
>gi|428773832|ref|YP_007165620.1| NAD-dependent epimerase/dehydratase [Cyanobacterium stanieri PCC
7202]
gi|428688111|gb|AFZ47971.1| NAD-dependent epimerase/dehydratase [Cyanobacterium stanieri PCC
7202]
Length = 314
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 117/329 (35%), Positives = 174/329 (52%), Gaps = 24/329 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG L K L+ GHEV + G+ S P + +I G +
Sbjct: 2 RILIM----GGTRFIGVSLTKILVNQGHEVVLFNRGNNPS------PVDGIQQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T ++ + G FD + DNNG+ L +P+ D V F+++SSAG+Y P+
Sbjct: 50 T---SAVQLEEKLKGEKFDAIFDNNGRTLSDTKPLVDLFNGK-VSHFVYVSSAGVYLPSH 105
Query: 196 EPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH E D + P++ H + E Y+ E+ + S RP Y+ GSGN D E WFFDR+VR
Sbjct: 106 QMPHREDDPLNPESRHRGKFETEAYLKESGIPFTSIRPVYIYGSGNYNDLENWFFDRLVR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
P+PIP G+ T HV DL+ + + N +A I+N+ DR T G+A CA
Sbjct: 166 DLPIPIPHHGLYITQFGHVEDLAVAMAGVLGNSQAIGQ-IYNISGDRYTTFTGLALACAS 224
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
A G ++I +YDP + +KAFP R HF+ + AK L W+ +L LKE
Sbjct: 225 AMGKNPNQIDIRYYDPNQVDVGNRKAFPIRMQHFFTDITKAKKDLSWQPKYDLISGLKES 284
Query: 370 FE-EYVKIGRDKKAMQFEIDDKILESLKV 397
FE +Y+ GRDKK + F +D +I +++K
Sbjct: 285 FENDYLATGRDKKEIDFSVDQQIFKTMKT 313
>gi|428774896|ref|YP_007166683.1| NAD-dependent epimerase/dehydratase [Halothece sp. PCC 7418]
gi|428689175|gb|AFZ42469.1| NAD-dependent epimerase/dehydratase [Halothece sp. PCC 7418]
Length = 311
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 116/327 (35%), Positives = 179/327 (54%), Gaps = 24/327 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG IG L K L+ GHEVT+ G+ S P E+ G +
Sbjct: 2 RILIM----GGTRFIGVALTKILVEQGHEVTLFNRGNNPS------PVEGVREV--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
D ++ + + +FD + DNNG+ L +P+ + K ++ F+++SSAG+Y +D
Sbjct: 50 K---DTDQLKDQLAKESFDAIFDNNGRELSDTQPLIELFKDQ-IQHFVYVSSAGVYLKSD 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH E D + P + H E Y+SE W S RP Y+ G+GN D E WFFDRI+R
Sbjct: 106 QMPHYEADAIDPKSRHKGKHDTETYLSEMGVPWTSVRPVYIYGAGNYNDLEAWFFDRILR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
R +PIPG G T + HV+DL+ + + N +A + ++N+ +R VT +G+A+ CA+
Sbjct: 166 DRAIPIPGHGEHITQLGHVQDLAHAMASILGNKKALAQ-VYNISGERYVTFNGIARACAK 224
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
A G +++VHY+PK KK FP R HF+A+ AK L W+ +L LKE
Sbjct: 225 AVGKSPEDLKLVHYNPKDFDFGKKKPFPLRMQHFFADISKAKTDLDWQPQYDLISGLKES 284
Query: 370 FE-EYVKIGRDKKAMQFEIDDKILESL 395
FE +Y+ R + + F +DD+IL +
Sbjct: 285 FEKDYLASNRHEADIDFSLDDQILSAF 311
>gi|224124986|ref|XP_002319474.1| predicted protein [Populus trichocarpa]
gi|222857850|gb|EEE95397.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 127/345 (36%), Positives = 180/345 (52%), Gaps = 20/345 (5%)
Query: 58 RRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK 117
RR + ++ SA+ K +LI+ GG IG +L++ L+ GH+VT+ T G
Sbjct: 38 RRVWQTKGALQVSASSSKNILIM----GGTRFIGVFLSRLLVKEGHQVTLFTRGKA---P 90
Query: 118 MKKP-PFNRFNEIVSAGGKTVW--GDPAE---VGNVVGGVTFDVVLDNNGKNLDAVRPVA 171
+ +P P + K + GD + V + FDVV D NG+ V P+
Sbjct: 91 ITQPLPGESDQDYADFSSKILHLKGDRKDFEFVKTSLAAKGFDVVYDINGREAVEVEPIL 150
Query: 172 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASF 228
D ++QF++ SSAG+Y +D PH E D V P + H ++ E + NW S
Sbjct: 151 DALPK--LEQFIYCSSAGVYLKSDLLPHSEKDAVDPKSRHKGKLETESLLESRGVNWTSI 208
Query: 229 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
RP Y+ G N EEWFF R+ RP+PIP SG+Q T + HV+DL+ + N E A
Sbjct: 209 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQMTQLGHVKDLAKAFIQVLGN-EKA 267
Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEP 347
S +FN+ ++ VT DG+AK CA+AAG P EIVHY+PK KKAFPFR+ HF+A
Sbjct: 268 SQQVFNISGEKYVTFDGLAKACAKAAGFPEPEIVHYNPKDFDFGKKKAFPFRDQHFFASI 327
Query: 348 RAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
AK +LGW +L E L + + G +K F DD I+
Sbjct: 328 DKAKHVLGWEPEFDLVEGLADSYNLDFGRGTYRKEADFFTDDLII 372
>gi|449017271|dbj|BAM80673.1| similar to mRNA-binding protein [Cyanidioschyzon merolae strain
10D]
Length = 429
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 188/345 (54%), Gaps = 23/345 (6%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN----RFNEI 129
+ +IVN SGGHA IG YLA++LL EV ++ G E+ + K+P R E
Sbjct: 75 RSAAIIVNPPSGGHASIGLYLARQLLSLDLEVYLLVAGQEDKYRSKQPNSALLGLREAEP 134
Query: 130 VSAGGKTVWGD---PAEVGNVV-----GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQ 181
+A +GD P+ + N+V +DN + LD + +A ++
Sbjct: 135 HAASFHISFGDADDPSILMNMVQTRRPSAGPIAAFIDNRSQTLDEALLLHKFAMGLNAER 194
Query: 182 FLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE-KYISENFSNWASFRPQYMIGSGNNK 240
+L++SS GIY+P D P +E D V+ AG QVE +++ ++ +A+FRP Y+IG K
Sbjct: 195 YLYVSSCGIYEPGDYAPFIETDQVRQSAGQAQVESRFLRDSVIPFAAFRPMYIIGKHAAK 254
Query: 241 -DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV-ENPEAASSNIFNLVSD 298
D +F DRI RKRP+P+PG G F ++ H D++SML AV P+ S +FN VS
Sbjct: 255 LDYTNFFLDRITRKRPIPLPGKGNAFVSLTHAEDVASMLACAVLARPDEVSGQVFNAVSP 314
Query: 299 RAVTLDGMAKLCAQAA---GLPVEIVHYDPKAAGIDAKKA--FPFRNMH-FYAEPRAAKD 352
R VTL G+A++C + EI++YDP GID K+A PFR + F A+P A
Sbjct: 315 RYVTLKGLAEMCHRVVHGDKSKPEIIYYDPVKLGIDPKEATGLPFRVSYPFIADPGKAMR 374
Query: 353 ILGW--RSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESL 395
+L W R L DL+E +EEY+++G ++ + DD+I S+
Sbjct: 375 LLAWQPRHDRTLQNDLQEMYEEYLELGLHERRVDLTNDDRIARSV 419
>gi|118487652|gb|ABK95651.1| unknown [Populus trichocarpa]
Length = 380
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 127/345 (36%), Positives = 180/345 (52%), Gaps = 20/345 (5%)
Query: 58 RRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK 117
RR + ++ SA+ K +LI+ GG IG +L++ L+ GH+VT+ T G
Sbjct: 38 RRVWQTKGALQVSASSSKNILIM----GGTRFIGVFLSRLLVKEGHQVTLFTRGKA---P 90
Query: 118 MKKP-PFNRFNEIVSAGGKTVW--GDPAE---VGNVVGGVTFDVVLDNNGKNLDAVRPVA 171
+ +P P + K + GD + V + FDVV D NG+ V P+
Sbjct: 91 ITQPLPGESDQDYADFSSKILHLKGDRKDFEFVKTSLAAKGFDVVYDINGREAVEVEPIL 150
Query: 172 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASF 228
D ++QF++ SSAG+Y +D PH E D V P + H ++ E + NW S
Sbjct: 151 DALPK--LEQFIYCSSAGVYLKSDLLPHSEKDAVDPKSRHKGKLETESLLESRGVNWTSI 208
Query: 229 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
RP Y+ G N EEWFF R+ RP+PIP SG+Q T + HV+DL+ + N E A
Sbjct: 209 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQMTQLGHVKDLAKAFIQVLGN-EKA 267
Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEP 347
S +FN+ ++ VT DG+AK CA+AAG P EIVHY+PK KKAFPFR+ HF+A
Sbjct: 268 SQQVFNISGEKYVTFDGLAKACAKAAGFPEPEIVHYNPKDFDFGKKKAFPFRDQHFFASI 327
Query: 348 RAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
AK +LGW +L E L + + G +K F DD I+
Sbjct: 328 DKAKHVLGWEPEFDLVEGLADSYNLDFGRGTYRKEADFFTDDLII 372
>gi|212722236|ref|NP_001131905.1| uncharacterized protein LOC100193292 [Zea mays]
gi|194692874|gb|ACF80521.1| unknown [Zea mays]
gi|413941839|gb|AFW74488.1| hypothetical protein ZEAMMB73_436145 [Zea mays]
gi|413954163|gb|AFW86812.1| hypothetical protein ZEAMMB73_149219 [Zea mays]
Length = 374
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 192/371 (51%), Gaps = 27/371 (7%)
Query: 32 SFSSYSHLSSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIG 91
+ S +S ++ VSIS + +R S A ++AA+ K +L++ GG IG
Sbjct: 16 TISDFSGAAAAVSIS---------TQKRRSRGARVQVSAAADSKNILVM----GGTRFIG 62
Query: 92 FYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GDPAE---VGN 146
+L++ L+ GH+VT+ T G + ++ P E K + GD + V
Sbjct: 63 VFLSRLLVKEGHQVTLFTRG--KAPITQQLPGESDAEYADFSSKVLHLKGDRQDFEFVKT 120
Query: 147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK 206
+ +DVV D NG+ V P+ + + ++Q+++ SSAG+Y +D PH E D V
Sbjct: 121 SLAANGYDVVYDINGREAVQVEPIIEALPN--LQQYIYCSSAGVYLKSDILPHCEVDAVD 178
Query: 207 PDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM 263
P + H ++ E ++ NW S RP Y+ G N EEWFF R+ RP+PIPG+G
Sbjct: 179 PKSRHKGKLETESLLTSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGAGN 238
Query: 264 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVH 322
Q T + HV+DL+ L + NP+ AS IFN+ + VT DG+A+ CA+A G P E+VH
Sbjct: 239 QITQLGHVKDLARAFNLVLGNPK-ASKQIFNISGAKYVTFDGLARACAKAGGFPEPELVH 297
Query: 323 YDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKA 382
Y+PK KKAFPFR+ HF+A A LGW +L + L + G +K
Sbjct: 298 YNPKEFDFGKKKAFPFRDQHFFASVEKATSELGWTPEFDLVQGLTNSYNLDFGRGTFRKE 357
Query: 383 MQFEIDDKILE 393
F DD IL+
Sbjct: 358 ADFTTDDMILD 368
>gi|425454397|ref|ZP_18834140.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
gi|389804948|emb|CCI15631.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
Length = 311
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 120/324 (37%), Positives = 173/324 (53%), Gaps = 24/324 (7%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG IG L K L+ GHEV + G+ K P +I G +
Sbjct: 2 KILIM----GGTRFIGVSLTKVLVEQGHEVVLFNRGN------KPAPVAGVRQI--HGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
T D A++ + F+ + DNNG+ L +P+ + + F+++SSAG+Y +D
Sbjct: 50 T---DAAQLKEKLKNEDFEAIFDNNGRELRDTQPLVEIFGDR-IGHFVYVSSAGVYLKSD 105
Query: 196 EPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ PH EGD + P + H + E Y+SE W S RP Y+ G N D E WFFDR+VR
Sbjct: 106 QMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPRNYNDLEAWFFDRLVR 165
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
RP+PIPG G FT HV DL+ + + N +A ++N+ DR VT +G+AK CA
Sbjct: 166 NRPIPIPGHGEHFTQFGHVADLAKAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAKACAA 224
Query: 313 AAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
A G +EIV+Y+PK KK FP R HFYA+ A L W+ +L L +
Sbjct: 225 AMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHFYADINKATRELNWQPEYDLVSGLTDS 284
Query: 370 FE-EYVKIGRDKKAMQFEIDDKIL 392
F+ +Y+ GRD++ + IDD+IL
Sbjct: 285 FQNDYLASGRDRQEIDLAIDDQIL 308
>gi|56752277|ref|YP_172978.1| mRNA-binding protein [Synechococcus elongatus PCC 6301]
gi|81300635|ref|YP_400843.1| mRNA-binding protein [Synechococcus elongatus PCC 7942]
gi|56687236|dbj|BAD80458.1| mRNA-binding protein [Synechococcus elongatus PCC 6301]
gi|81169516|gb|ABB57856.1| mRNA-binding protein [Synechococcus elongatus PCC 7942]
Length = 313
Score = 203 bits (517), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 119/331 (35%), Positives = 183/331 (55%), Gaps = 34/331 (10%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++L++ GG IG L ++LL +GH VT+ FNR + AG +
Sbjct: 2 RILVI----GGSRFIGVALVRQLLAAGHAVTV---------------FNRGSRPALAGVE 42
Query: 136 TVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG-VKQFLFISSAGIY 191
+ GD PA + + G +FDVV DN G+ +A A A G +Q +++SSAG+Y
Sbjct: 43 QLVGDRQDPAALAQL-QGRSFDVVFDNTGR--EAAETQALVASLDGQFQQLIYVSSAGVY 99
Query: 192 KPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ P E D V P + H + E ++ + + +FRP Y+ G GN E+WFFD
Sbjct: 100 AASDQLPLRESDPVDPQSRHRGKFETENWLQQQGLPFTAFRPVYIYGPGNYNPLEQWFFD 159
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RI+R RP+PIPG+G+ T + HV DL++ + AV+NP A I+NL DR V+ DG+A+
Sbjct: 160 RILRDRPLPIPGTGLHLTQLGHVEDLATAMVAAVKNPRAI-GQIYNLSGDRYVSFDGLAR 218
Query: 309 LCAQAAG---LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
CA AAG + +VHYDPK + +KAFP R HF A+ L W +L +
Sbjct: 219 ACAIAAGRDPQALHLVHYDPKQLNLGKRKAFPMRAQHFITAIDQARQDLEWVPRFSLIDG 278
Query: 366 LKERFE-EYVKIGRDKKAMQFEIDDKILESL 395
L+ + +Y+ G D++A+ F +D++IL ++
Sbjct: 279 LQNSLQNDYLARGLDQQAVDFSLDEEILAAV 309
>gi|242085078|ref|XP_002442964.1| hypothetical protein SORBIDRAFT_08g005500 [Sorghum bicolor]
gi|241943657|gb|EES16802.1| hypothetical protein SORBIDRAFT_08g005500 [Sorghum bicolor]
Length = 384
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/355 (35%), Positives = 188/355 (52%), Gaps = 21/355 (5%)
Query: 51 LACPASSRRSSVSAFTVK-----ASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEV 105
++ A RRSS + A+AA+ K +L++ GG IG +L++ L+ GH+V
Sbjct: 27 ISVSAQKRRSSWQPRGARVQVSAAAAADSKNILVM----GGTRFIGVFLSRILVKEGHQV 82
Query: 106 TIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGDPAE---VGNVVGGVTFDVVLDNNG 161
T+ T G + ++ + E S+ + + GD + V + +DVV D NG
Sbjct: 83 TLFTRGKAPITQQLPGESDAEYAEF-SSKVQHLKGDRQDFEFVKTSLAAKGYDVVYDING 141
Query: 162 KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYI 218
+ V P+ D + ++Q+++ SSAG+Y +D PH E D V P + H ++ E +
Sbjct: 142 REAVQVEPIIDALPN--LEQYIYCSSAGVYLKSDILPHCEVDAVDPKSRHKGKLETESLL 199
Query: 219 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 278
+ NW S RP Y+ G N EEWFF R+ RP+PIPG+G Q T + HV+DL+
Sbjct: 200 TSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGAGNQITQLGHVKDLARAF 259
Query: 279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFP 337
L + NP+ AS IFN+ + VT DG+A+ CA+A G P E+VHY+PK KKAFP
Sbjct: 260 NLVLGNPK-ASQQIFNISGAKYVTFDGLARACAKAGGFPEPELVHYNPKDFDFGKKKAFP 318
Query: 338 FRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
FR+ HF+A A LGW +L + L + + G +KA F DD IL
Sbjct: 319 FRDQHFFASVEKAISELGWTPEFDLVDGLTDSYNLDFGRGTFRKAADFTTDDIIL 373
>gi|116786922|gb|ABK24300.1| unknown [Picea sitchensis]
Length = 407
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 182/354 (51%), Gaps = 16/354 (4%)
Query: 47 PSSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVT 106
P F S + T +S+ KK+LI+ GG IG YL++ L+ +GHEVT
Sbjct: 54 PQQFQTNKLSYKSRGRVEITASSSSVPPKKILIM----GGTRFIGVYLSRLLVKAGHEVT 109
Query: 107 IMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGDPAE---VGNVVGGVTFDVVLDNNGK 162
+ T G + K+ + E S+ + GD + + + FDVV D NG+
Sbjct: 110 LFTRGKSPVTQKLAGETDQEYAEF-SSKVLHIKGDRQDFEFLKTKLSASGFDVVYDINGR 168
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYIS 219
V P+ D + ++Q+++ SSAG+Y +D PH E D V P + H + E ++
Sbjct: 169 EAVEVEPILDALPN--IEQYIYCSSAGVYLKSDILPHFETDAVDPKSRHKGKLNTENLLT 226
Query: 220 ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 279
NW S RP Y+ G N EEWFF R+ RP+PIP SG+Q T + HV+DL+
Sbjct: 227 TRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPKSGLQMTQLGHVKDLARAFL 286
Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPF 338
+ + N E AS ++N+ + VT G+AK CA+AAG P +IVHY+PK KK+FP
Sbjct: 287 MVLGN-EKASKQVYNISGAKYVTFSGLAKACAKAAGFPEPDIVHYNPKEFDFGKKKSFPL 345
Query: 339 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
R+ HF+ A+ LGW+ +L + L + + G +K F +DD IL
Sbjct: 346 RDQHFFTSIEKAQTDLGWKPEFDLVKGLTDSYNLDFGRGTFRKEPDFSVDDMIL 399
>gi|425447101|ref|ZP_18827093.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
gi|389732385|emb|CCI03640.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
Length = 311
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/328 (35%), Positives = 173/328 (52%), Gaps = 32/328 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGG 134
K+LI+ GG IG L K L+ GHEV + FNR N+ AG
Sbjct: 2 KILIM----GGTRFIGVSLTKVLVEQGHEVVL---------------FNRGNKPAPVAGV 42
Query: 135 KTVWGDPAEVGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD + + + +F+ + DNNG+ L +P+ + ++ F+++SSAG+Y
Sbjct: 43 RQIHGDRTDASQLKEKLKNESFEAIFDNNGRELSDTQPLVQIFRDR-IQHFVYVSSAGVY 101
Query: 192 KPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ PH EGD + + H + E Y+SE W S RP Y+ G N D E WFFD
Sbjct: 102 LKSDQMPHKEGDKLDTKSRHKGKHETENYLSEMGLPWTSIRPVYIYGPRNYNDLEAWFFD 161
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
R+VR RP+PIP G FT HV DL+ + + N +A ++N+ DR VT +G+AK
Sbjct: 162 RLVRNRPIPIPSHGEHFTQFGHVADLAKAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAK 220
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
CA A G +EIV+Y+PK KK FP R HFYA+ A L W+ +L
Sbjct: 221 ACAAAMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHFYADINKATRELNWQPEYDLVSG 280
Query: 366 LKERFE-EYVKIGRDKKAMQFEIDDKIL 392
L + F+ +Y+ GRD++ + IDD+IL
Sbjct: 281 LTDSFQNDYLASGRDRQEIDLAIDDQIL 308
>gi|387196718|gb|AFJ68775.1| hypothetical protein NGATSA_3008300 [Nannochloropsis gaditana
CCMP526]
Length = 373
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 125/347 (36%), Positives = 189/347 (54%), Gaps = 22/347 (6%)
Query: 54 PASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGD 112
P SR SS+ A + LI+ GGH IG++LA +L+ G +VT++ D
Sbjct: 40 PLRSRGSSM--------MAAGQSALIIQNKGGGHGEIGYHLALKLVKEKGLQVTLLN--D 89
Query: 113 ENSDKMKKPPFNRFNEIVSAGGKTVWGD--PAEVGNVVGGVTFDVVLDNNGKNLDAVRPV 170
+ D+ K PF + ++ AG + D A+V +++ G +F V DN K+ +A+ P
Sbjct: 90 KYDDQ--KQPFKSYGDLTGAGVDILSADLGSADVKSLLSGRSFHYVFDNFAKSSEALPPF 147
Query: 171 ADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP 230
D A++ ++ ++F+SS G+Y+ D P +E V + ++E I + + FRP
Sbjct: 148 LDLARAWPLQVYVFVSSGGMYQVEDSFPLLEDSPVALNEPR-KIELAIEASGLPYTFFRP 206
Query: 231 QYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
QY+ G +K D +WFF R+VR +P+P+P G QFT + HV D++S+L V+NP+A
Sbjct: 207 QYIYGPLTSKRDYLDWFFHRLVRDKPLPLPLHGDQFTTLTHVEDVASLLAAVVDNPQALR 266
Query: 290 SNIFNLVSDRAVTLDGMAKLCAQAAG---LPVEIVHYDPKAAGIDAKKAF-PFRNMHFYA 345
+FN SDR +T G+ + A G IV YDP D K + PFRN HF
Sbjct: 267 -QVFNCASDRCITFKGVVGVAGNAMGRKDAKEAIVLYDPAERKADLPKGWWPFRNTHFNV 325
Query: 346 EPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
P AK +LGW +L +DL+E + YV G DKK M FE+D+KIL
Sbjct: 326 SPEKAKRLLGWVPAHDLAKDLEEYYRGYVAAGLDKKEMSFEVDEKIL 372
>gi|428218511|ref|YP_007102976.1| NAD-dependent epimerase/dehydratase [Pseudanabaena sp. PCC 7367]
gi|427990293|gb|AFY70548.1| NAD-dependent epimerase/dehydratase [Pseudanabaena sp. PCC 7367]
Length = 311
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/323 (35%), Positives = 174/323 (53%), Gaps = 32/323 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGDPAE 143
GG +G L + L+ GHEV + FNR N A G K + GD +
Sbjct: 2 GGTRFVGVALTQNLISLGHEVVL---------------FNRGNRPAPAAGVKMIQGDRKD 46
Query: 144 VGNV---VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
+ + + G +FD + DN+G+ L +P+ D + ++ F+++SSAG+Y+ ++ P+
Sbjct: 47 IQQLKEKLSGQSFDAIFDNSGRELSDTKPIVDMFRDR-IRHFIYMSSAGVYQESETLPYF 105
Query: 201 EGDVVKPDAGH---VQVEKYISENFSN----WASFRPQYMIGSGNNKDCEEWFFDRIVRK 253
E D P++ H + E Y+ + +S + S RP Y+ G GN D E WFFDRIVR
Sbjct: 106 EEDPTNPESRHKGKLHTEAYLKKLYSAEGFPFTSIRPTYIYGPGNYNDVEAWFFDRIVRD 165
Query: 254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 313
RPVPIPG+G T + HV DL++ + ++ P+ I+N+ R VT G+AKLCAQA
Sbjct: 166 RPVPIPGNGQFITQLGHVEDLAAAMAAVLKQPK-TYGEIYNISDIRYVTYSGIAKLCAQA 224
Query: 314 AGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 370
G ++ V+Y+PK KKAFPFR HF+ A L W +L E L+ F
Sbjct: 225 IGKDPDKLQFVYYNPKDFDFGKKKAFPFRLQHFFTAIDKALLDLDWEPEFDLVEGLETSF 284
Query: 371 -EEYVKIGRDKKAMQFEIDDKIL 392
++YV GR ++ + F IDD+I+
Sbjct: 285 KQDYVPSGRHEQEIDFAIDDQII 307
>gi|413941840|gb|AFW74489.1| hypothetical protein ZEAMMB73_436145 [Zea mays]
gi|413954162|gb|AFW86811.1| hypothetical protein ZEAMMB73_149219 [Zea mays]
Length = 375
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/372 (34%), Positives = 192/372 (51%), Gaps = 28/372 (7%)
Query: 32 SFSSYSHLSSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIG 91
+ S +S ++ VSIS + +R S A ++AA+ K +L++ GG IG
Sbjct: 16 TISDFSGAAAAVSIS---------TQKRRSRGARVQVSAAADSKNILVM----GGTRFIG 62
Query: 92 FYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GDPAE---VGN 146
+L++ L+ GH+VT+ T G + ++ P E K + GD + V
Sbjct: 63 VFLSRLLVKEGHQVTLFTRG--KAPITQQLPGESDAEYADFSSKVLHLKGDRQDFEFVKT 120
Query: 147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG-DVV 205
+ +DVV D NG+ V P+ + + ++Q+++ SSAG+Y +D PH E D V
Sbjct: 121 SLAANGYDVVYDINGREAVQVEPIIEALPN--LQQYIYCSSAGVYLKSDILPHCEVVDAV 178
Query: 206 KPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSG 262
P + H ++ E ++ NW S RP Y+ G N EEWFF R+ RP+PIPG+G
Sbjct: 179 DPKSRHKGKLETESLLTSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGAG 238
Query: 263 MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIV 321
Q T + HV+DL+ L + NP+ AS IFN+ + VT DG+A+ CA+A G P E+V
Sbjct: 239 NQITQLGHVKDLARAFNLVLGNPK-ASKQIFNISGAKYVTFDGLARACAKAGGFPEPELV 297
Query: 322 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKK 381
HY+PK KKAFPFR+ HF+A A LGW +L + L + G +K
Sbjct: 298 HYNPKEFDFGKKKAFPFRDQHFFASVEKATSELGWTPEFDLVQGLTNSYNLDFGRGTFRK 357
Query: 382 AMQFEIDDKILE 393
F DD IL+
Sbjct: 358 EADFTTDDMILD 369
>gi|299117075|emb|CBN73846.1| mRNA binding protein [Ectocarpus siliculosus]
Length = 333
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/309 (38%), Positives = 170/309 (55%), Gaps = 11/309 (3%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG-DENSDKMKKPPFNRFNEIVSAGG 134
K LI GGH +G++LA +L+ VT++ G +N D PF + ++ S G
Sbjct: 5 KALIAQNKGGGHGELGYHLALKLIEKDISVTLLQDGAGKNKDSQ---PFASYGDLESKGA 61
Query: 135 KTVWGDPAE-VGNVV-GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
VWGD +E VG ++ G +FD V DN K++D + +AD +K+ GVK + ++SS G+YK
Sbjct: 62 TIVWGDFSEGVGKLIPEGESFDYVFDNYAKDVDTCKDLADCSKAWGVKNYAYVSSGGMYK 121
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNK-DCEEWFFDRIV 251
+DE P E VK ++G QVEKY+++ W SFRPQY+ G NK D +WFFDR+V
Sbjct: 122 DSDEVPFTESSDVK-ESGQRQVEKYVADLGLPWTSFRPQYIYGPLTNKRDYLDWFFDRVV 180
Query: 252 RKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC 310
+P+P G Q + H D++SML V N E A +FN SDR +T +G+ +
Sbjct: 181 HGLEFIPLPLHGDQLVALTHAEDVASMLASVVGN-ERAVKQVFNCASDRYITYNGLFREV 239
Query: 311 AQAAGLPVEIVHYDPKAAGIDAKKA-FPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 369
+ A V + Y + D KK FPFRN HF AK +LGW + +DL E
Sbjct: 240 GKVAKPAVSKMAYYYEPRDYDLKKGWFPFRNNHFVVNSEKAKRLLGWSPKHTITDDLAEY 299
Query: 370 FEEYVKIGR 378
FE Y G+
Sbjct: 300 FEGYKAAGK 308
>gi|357150725|ref|XP_003575555.1| PREDICTED: uncharacterized protein At1g09340, chloroplastic-like
[Brachypodium distachyon]
Length = 695
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 118/333 (35%), Positives = 179/333 (53%), Gaps = 18/333 (5%)
Query: 69 ASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE 128
A+AA+ K +L++ GG IG ++++ L+ GH+VT+ T G + ++ P E
Sbjct: 48 AAAADSKNILVM----GGTRFIGVFMSRLLVKEGHQVTLFTRG--KAPVTQQLPGESDAE 101
Query: 129 IVSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFL 183
K + GD + V ++ FDVV D NG+ V P+ + + ++QF+
Sbjct: 102 YAEFSSKVLHLKGDRQDFDFVKTNLSAKGFDVVYDINGREATEVAPILEALPN--LEQFI 159
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNK 240
+ SSAG+Y +D PH E D V P + H ++ E + ++ NW S RP Y+ G N
Sbjct: 160 YCSSAGVYLKSDLLPHFETDAVDPKSRHKGKLETESLLEKSGVNWTSIRPVYIYGPLNYN 219
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
EEWFF R+ RP+PIPG+G Q T + HV+DL++ + NP AAS ++N+ +
Sbjct: 220 PVEEWFFHRLKAGRPIPIPGAGNQITQLGHVKDLATAFIKVLGNP-AASKQVYNISGTKY 278
Query: 301 VTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRST 359
VT DG+A+ CA+A G P EI+HY+PK KKAFPFR+ HF+A A LG+
Sbjct: 279 VTFDGLARACAKAGGFPEPEIIHYNPKDFDFGKKKAFPFRDQHFFASVEKASKELGFTPE 338
Query: 360 TNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
+L + L + + G +K F DD IL
Sbjct: 339 YDLVDGLTDSYSLDFGRGTFRKEADFTTDDMIL 371
>gi|159464355|ref|XP_001690407.1| chloroplast stem-loop-binding protein [Chlamydomonas reinhardtii]
gi|34398360|gb|AAO22242.1| 38 kDa ribosome-associated protein precursor [Chlamydomonas
reinhardtii]
gi|158279907|gb|EDP05666.1| chloroplast stem-loop-binding protein [Chlamydomonas reinhardtii]
Length = 401
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/335 (36%), Positives = 181/335 (54%), Gaps = 21/335 (6%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN--SDKMKKPP--FNRFNE 128
E KK+L++ GG IG YLA++L+ GH+VT+ T G + S+ P F F+
Sbjct: 57 ESKKILLM----GGTRFIGLYLARDLIAQGHDVTLFTRGKKKVASEIPDDTPSSFADFSR 112
Query: 129 IVSAGGKTVWGDPA---EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
V K + GD EV + F VV D NG+ V PV KS+ ++Q+++
Sbjct: 113 KV----KHIQGDRMDFPEVERKLAREGFQVVYDINGREAVEVEPVLKGTKST-LEQYIYC 167
Query: 186 SSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDC 242
SSAG+Y D PH E D V P + H + E+ + ++ N+ S RP Y+ G N
Sbjct: 168 SSAGVYLKNDMMPHREEDAVDPKSRHKGKLDTEELLRKSGVNFTSIRPVYIYGPLNYNPV 227
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
EEWFF R+ RP+P+PGSG Q T + HV+DLS+ + N +AA ++N+ +R VT
Sbjct: 228 EEWFFHRLKAGRPIPVPGSGQQVTQLGHVKDLSTAFVKVLGNKKAA-RQVYNISGERFVT 286
Query: 303 LDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTN 361
DG+AK CA+A G+P E++HY+ K KAFP R+ HF+A A L W
Sbjct: 287 FDGIAKACAKAMGVPEPELIHYNAKEFDFGKDKAFPMRDQHFFASVDKAMADLDWTPEFG 346
Query: 362 LPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLK 396
L + LK+ +++ G +K F+ DD I+E+ K
Sbjct: 347 LVDGLKDSYKKDFGRGTFRKEPNFKCDDMIIEAKK 381
>gi|302828240|ref|XP_002945687.1| hypothetical protein VOLCADRAFT_78664 [Volvox carteri f.
nagariensis]
gi|300268502|gb|EFJ52682.1| hypothetical protein VOLCADRAFT_78664 [Volvox carteri f.
nagariensis]
Length = 401
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 180/335 (53%), Gaps = 21/335 (6%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN--SDKMKKPP--FNRFNE 128
E KK+L++ GG IG YLA++L+ +GHEVT+ T G + + P F F+
Sbjct: 54 EPKKILMM----GGTRFIGLYLARQLVEAGHEVTLFTRGKKKVAYEIPDDTPASFATFSR 109
Query: 129 IVSAGGKTVWGDPA---EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
+ K + GD EV + F VV D NG+ V PV +S+ ++Q+++
Sbjct: 110 SI----KHIQGDRMDFPEVERKLAREGFQVVYDINGREAVEVEPVLAGTRST-LEQYIYC 164
Query: 186 SSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDC 242
SSAG+Y D+ PH E D V P + H + E+ + ++ N+ S RP Y+ G N
Sbjct: 165 SSAGVYLKNDQMPHREEDAVDPKSRHKGKLDTEELLRKSGVNFTSIRPVYIYGPLNYNPV 224
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
EEWFF R+ RP+P+PGSG Q T + HV+DL++ + N +AA I+N+ +R VT
Sbjct: 225 EEWFFHRLKAGRPIPVPGSGQQVTQLGHVKDLATAFVKVLGNKKAA-RQIYNISGERFVT 283
Query: 303 LDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTN 361
DG+AK CA+A GLP E++HY+ K K FP R+ HF+A A L W
Sbjct: 284 FDGIAKACAKAMGLPEPELIHYNAKEFDFGKDKPFPMRDQHFFASVDKAMAELDWTPEFG 343
Query: 362 LPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLK 396
L + LK+ + + G +K F+ DD ILE +K
Sbjct: 344 LLDGLKDSYTKDFGRGTFRKEANFKCDDLILEKVK 378
>gi|413941841|gb|AFW74490.1| hypothetical protein ZEAMMB73_436145 [Zea mays]
gi|413954161|gb|AFW86810.1| hypothetical protein ZEAMMB73_149219 [Zea mays]
Length = 320
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 167/318 (52%), Gaps = 14/318 (4%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GDPA 142
GG IG +L++ L+ GH+VT+ T G + ++ P E K + GD
Sbjct: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRG--KAPITQQLPGESDAEYADFSSKVLHLKGDRQ 59
Query: 143 E---VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH 199
+ V + +DVV D NG+ V P+ + + ++Q+++ SSAG+Y +D PH
Sbjct: 60 DFEFVKTSLAANGYDVVYDINGREAVQVEPIIEALPN--LQQYIYCSSAGVYLKSDILPH 117
Query: 200 VEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV 256
E D V P + H ++ E ++ NW S RP Y+ G N EEWFF R+ RP+
Sbjct: 118 CEVDAVDPKSRHKGKLETESLLTSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPI 177
Query: 257 PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL 316
PIPG+G Q T + HV+DL+ L + NP+ AS IFN+ + VT DG+A+ CA+A G
Sbjct: 178 PIPGAGNQITQLGHVKDLARAFNLVLGNPK-ASKQIFNISGAKYVTFDGLARACAKAGGF 236
Query: 317 PV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
P E+VHY+PK KKAFPFR+ HF+A A LGW +L + L +
Sbjct: 237 PEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKATSELGWTPEFDLVQGLTNSYNLDFG 296
Query: 376 IGRDKKAMQFEIDDKILE 393
G +K F DD IL+
Sbjct: 297 RGTFRKEADFTTDDMILD 314
>gi|384248223|gb|EIE21708.1| NAD(P)-binding protein [Coccomyxa subellipsoidea C-169]
Length = 369
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 129/352 (36%), Positives = 185/352 (52%), Gaps = 15/352 (4%)
Query: 48 SSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI 107
++F +++R++ S V+ SAA K+VLI+ GG IG YLA++L+ +GH VT+
Sbjct: 23 AAFRPALKANKRANRS-IAVRVSAAATKEVLIL----GGTRFIGVYLARQLVEAGHGVTL 77
Query: 108 MTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE---VGNVVGGVTFDVVLDNNGKNL 164
+T G + + + + K + D + + + + G FD V D NG+
Sbjct: 78 LTRGKKEVTYQIPDDTDESYKAYKSAVKHIAADRKDKSMLDSQLAGKKFDAVYDMNGREA 137
Query: 165 DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISEN 221
D V V Q++F SSAG+Y + + PH E D V P + H + E + E
Sbjct: 138 DEADLV--LGALGDVGQYIFCSSAGVYLKSSQMPHFEVDAVDPKSRHKGKLNTEALLEEK 195
Query: 222 FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
NW S RP Y+ G N EEWFF RI RP+PIP SG Q T + HV+DL++
Sbjct: 196 NVNWTSIRPVYIYGPLNYNPVEEWFFHRIKEGRPIPIPNSGQQVTQLGHVKDLATAFVKV 255
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRN 340
++N E AS ++N+ +R VT DG+AK CA AAG P E+VHY+PK KKAFP R+
Sbjct: 256 LDN-EKASRQVYNISGERFVTFDGIAKACAAAAGAPEPELVHYNPKDFDFGGKKAFPLRD 314
Query: 341 MHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
HF+ A+ L W L + LK+ FE+ G +KA F DD IL
Sbjct: 315 QHFFTSIAKAQADLDWTPEYGLVDGLKDSFEKDFGRGTFRKAADFSTDDMIL 366
>gi|443475570|ref|ZP_21065515.1| NAD-dependent epimerase/dehydratase [Pseudanabaena biceps PCC 7429]
gi|443019578|gb|ELS33647.1| NAD-dependent epimerase/dehydratase [Pseudanabaena biceps PCC 7429]
Length = 311
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 121/327 (37%), Positives = 173/327 (52%), Gaps = 32/327 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP-PFNRFNEIVSAGGKTVWGD--- 140
GG IG L K L+ GHEVT+ G KKP P AG +T+ GD
Sbjct: 2 GGTRFIGVSLVKLLVSQGHEVTLFNRG-------KKPSPI--------AGLRTIIGDRTD 46
Query: 141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
P ++ + + G +F+V+ DNNG+ L +P+ + + ++ F+++SSAG+Y +D P+
Sbjct: 47 PQQLQDKLRGESFEVIFDNNGRELSDTQPLVEIFRDR-LQHFVYMSSAGVYLDSDILPYR 105
Query: 201 EGDVVKPDAGH---VQVEKYI----SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK 253
E D P + H + E Y+ SEN + S RP Y+ G N D E WFFDRIVR
Sbjct: 106 ETDATDPKSRHKGKLDTESYLQQLHSENGFPYTSIRPTYIYGPQNYNDVEAWFFDRIVRD 165
Query: 254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 313
RP+PIPG+G T + HV DL+ + + N +A I+N+ +R VT G+AK CA A
Sbjct: 166 RPIPIPGNGQFITQLGHVEDLARAMAAVLGNQQAIGE-IYNISDNRYVTFVGLAKQCAIA 224
Query: 314 AGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 370
AG + V+Y+PK KKAFPFR HF+A A L W+ +L L F
Sbjct: 225 AGKDPSQLNFVYYNPKDFDFGKKKAFPFRLQHFFAAIAKANQDLQWQPKYDLVSGLTTSF 284
Query: 371 E-EYVKIGRDKKAMQFEIDDKILESLK 396
E +Y+ R + + F D +IL+S K
Sbjct: 285 ELDYLPSNRHQADIDFATDAQILDSAK 311
>gi|218186738|gb|EEC69165.1| hypothetical protein OsI_38123 [Oryza sativa Indica Group]
Length = 373
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/337 (35%), Positives = 175/337 (51%), Gaps = 29/337 (8%)
Query: 69 ASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE 128
A+AA+ K +L++ GG IG +L++ L+ GH+VT+ T G + ++ P E
Sbjct: 46 AAAADSKNILVM----GGTRFIGVFLSRLLVKEGHQVTLFTRG--KAPITQQLPGESDAE 99
Query: 129 IVSAGGKTVW--GDPAE---VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL 183
K + GD + V + FDVV D NG+ V P+ D ++Q++
Sbjct: 100 YAEFSSKVLHLKGDRQDFDFVKTSLAAKGFDVVYDINGREAVEVAPILD--ALPNLEQYI 157
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNK 240
+ SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G N
Sbjct: 158 YCSSAGVYLKSDLLPHFETDAVDPKSRHKGKLETESLLETRDVNWTSIRPVYIYGPLNYN 217
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
EEWFF R+ RP+P+PG+G Q T + HV+DL++ LA+ NP+ AS +FN+ +
Sbjct: 218 PVEEWFFHRLKAGRPIPVPGAGNQITQLGHVKDLATAFVLALGNPK-ASKQVFNISGAKY 276
Query: 301 VTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILG---- 355
VT DG+A+ CA+A G P EIVHY+PK KKAFPFR+ HF+A A+ G
Sbjct: 277 VTFDGLARACAKAGGFPEPEIVHYNPKDFDFGKKKAFPFRDQHFFASILGARVEAGVRPW 336
Query: 356 WRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
WR++ R G +K F DD IL
Sbjct: 337 WRASPTRTTSTSPR-------GTFRKPADFTTDDMIL 366
>gi|326531332|dbj|BAK05017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 369
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/386 (33%), Positives = 196/386 (50%), Gaps = 36/386 (9%)
Query: 19 KLAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPASSRRSS---VSAFTVKASAAEKK 75
+ A + LPP FS + + +SIS A +RR S A A+AA+ K
Sbjct: 1 RAASSCLPP-----FSDFG--GAAISIS--------AQNRRRSWQPRGARMQVAAAADSK 45
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
+LI+ GG IG +L+++L+ GH+VT+ T G + ++ P E K
Sbjct: 46 NILIM----GGTRFIGLFLSRKLVQEGHQVTLFTRG--KAPITQQLPGESDAEYAEFSSK 99
Query: 136 TVW--GDPAE---VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ GD + V + F+VV D NG+ V P+ + + ++QF++ SSAG+
Sbjct: 100 VLHLKGDRKDFDFVKTSLSAKGFNVVYDINGREATEVSPILEALPN--LEQFIYCSSAGV 157
Query: 191 YKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
Y +D PH E D V P + H ++ E + + NW S RP Y+ G N EEWFF
Sbjct: 158 YLKSDLLPHFETDAVDPKSRHKGKLETESLLETSGVNWTSIRPVYIYGPLNYNPVEEWFF 217
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
R+ RP+PIP +G Q T + HV+DL++ + NP+ AS ++N+ + VT DG+A
Sbjct: 218 HRLKAGRPIPIPNAGNQITQLGHVKDLATAFIKVLGNPK-ASKQVYNISGSKYVTFDGLA 276
Query: 308 KLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDL 366
+ CA+A G P EI+HY+PK KKAFPFR+ HF+A A LG +L + L
Sbjct: 277 RACAKAGGFPEPEIIHYNPKDFDFGKKKAFPFRDQHFFASVEKASKDLGVTPEYDLLDGL 336
Query: 367 KERFEEYVKIGRDKKAMQFEIDDKIL 392
+ + G +K F DD IL
Sbjct: 337 TDSYNLDFGRGTFRKEADFTTDDMIL 362
>gi|449016344|dbj|BAM79746.1| similar to mRNA binding protein CSP41 precursor [Cyanidioschyzon
merolae strain 10D]
Length = 414
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 118/353 (33%), Positives = 176/353 (49%), Gaps = 21/353 (5%)
Query: 57 SRRSSVSA---FTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE 113
SRR+S+S + +A K+ L++ GG G YLAK L GHEV + G +
Sbjct: 68 SRRASLSMKLPMSCRADTIGSKRCLVI----GGTRFSGVYLAKVLGDLGHEVVLYNRGSK 123
Query: 114 NSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPV 170
++ P F +A T+ GD P EV + FD + D NG+ L+ RP
Sbjct: 124 PLQRVPNEPEGEF-AARAAMSSTIIGDRTKPDEVKEKLASENFDAIFDMNGRELEDTRPF 182
Query: 171 ADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWAS 227
A+ + + ++++SSAG+Y + PH+EGD P + H+ Q E+++ + W +
Sbjct: 183 AELF-AGKIDHYVYMSSAGVYLQSPVLPHIEGDACDPKSRHLGKLQTEEFLDSHGLPWTA 241
Query: 228 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
RP Y+ G N EEWFF RI RP+PIPG G T + HV DL++ + NP A
Sbjct: 242 IRPTYIYGPSNYNPIEEWFFARIAEDRPIPIPGDGTYMTGLGHVADLANAFAAVLGNPRA 301
Query: 288 ASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFY 344
++N+ ++VT +G+AK+CA A G + IVHYDP I KAFPFR HF+
Sbjct: 302 V-GKVYNIQDRKSVTYNGIAKMCALAMGRDPESIRIVHYDPNRVDIGKAKAFPFRLQHFF 360
Query: 345 AEPRAAKDILGWRSTTNLPEDLKERFEEYV--KIGRDKKAMQFEIDDKILESL 395
A L W +L + L++ + K K + F+ DD IL +
Sbjct: 361 TSVNRALRELDWDVDFDLLDGLRDSYHNDFLPKKQAGKLQVDFKTDDLILSQV 413
>gi|428222381|ref|YP_007106551.1| nucleoside-diphosphate-sugar epimerase [Synechococcus sp. PCC 7502]
gi|427995721|gb|AFY74416.1| nucleoside-diphosphate-sugar epimerase [Synechococcus sp. PCC 7502]
Length = 310
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 114/325 (35%), Positives = 167/325 (51%), Gaps = 31/325 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---P 141
GG +G L K LL GHEV + FNR N+ G + + GD P
Sbjct: 2 GGTRFLGVALTKTLLAQGHEVVL---------------FNRGNKPAPEGVRVIIGDRTDP 46
Query: 142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE 201
++ + FD + DNNG+ L +P+ D + ++ F+++SSAG+Y ++ P+ E
Sbjct: 47 IQIKEKLLYEQFDAIFDNNGRELTDTKPLVDLFRDR-IRHFVYMSSAGVYLDSEILPYFE 105
Query: 202 GDVVKPDAGH---VQVEKYISENFSN----WASFRPQYMIGSGNNKDCEEWFFDRIVRKR 254
GD V P + H + E Y+ + + + S RP Y+ G GN D E WFFDRIVR R
Sbjct: 106 GDAVDPKSRHKGKLHTESYLKQAYDEIGFPFTSIRPTYIYGPGNYNDLEAWFFDRIVRDR 165
Query: 255 PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA 314
P+PIPG+G T + HV DL + + AV + I+N+ R VT G+A+ A AA
Sbjct: 166 PIPIPGNGKFITQLGHVEDLVAAMA-AVLDKSITLGEIYNISDIRYVTFTGLAQATAIAA 224
Query: 315 GL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 371
G ++IV+Y+PK KKAFP R+ HF+A A L W +L + L F+
Sbjct: 225 GKSPDQIKIVYYNPKDFDFGKKKAFPLRSQHFFAAVDKAMTDLDWEPEFDLVDGLVTSFQ 284
Query: 372 E-YVKIGRDKKAMQFEIDDKILESL 395
+ Y+ R + F +DD+IL SL
Sbjct: 285 QDYLPSDRQNADIDFSVDDQILASL 309
>gi|413941842|gb|AFW74491.1| hypothetical protein ZEAMMB73_436145 [Zea mays]
gi|413954160|gb|AFW86809.1| hypothetical protein ZEAMMB73_149219 [Zea mays]
Length = 321
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/319 (36%), Positives = 167/319 (52%), Gaps = 15/319 (4%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GDPA 142
GG IG +L++ L+ GH+VT+ T G + ++ P E K + GD
Sbjct: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRG--KAPITQQLPGESDAEYADFSSKVLHLKGDRQ 59
Query: 143 E---VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH 199
+ V + +DVV D NG+ V P+ + + ++Q+++ SSAG+Y +D PH
Sbjct: 60 DFEFVKTSLAANGYDVVYDINGREAVQVEPIIEALPN--LQQYIYCSSAGVYLKSDILPH 117
Query: 200 VEG-DVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRP 255
E D V P + H ++ E ++ NW S RP Y+ G N EEWFF R+ RP
Sbjct: 118 CEVVDAVDPKSRHKGKLETESLLTSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRP 177
Query: 256 VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG 315
+PIPG+G Q T + HV+DL+ L + NP+ AS IFN+ + VT DG+A+ CA+A G
Sbjct: 178 IPIPGAGNQITQLGHVKDLARAFNLVLGNPK-ASKQIFNISGAKYVTFDGLARACAKAGG 236
Query: 316 LPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 374
P E+VHY+PK KKAFPFR+ HF+A A LGW +L + L +
Sbjct: 237 FPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKATSELGWTPEFDLVQGLTNSYNLDF 296
Query: 375 KIGRDKKAMQFEIDDKILE 393
G +K F DD IL+
Sbjct: 297 GRGTFRKEADFTTDDMILD 315
>gi|223995261|ref|XP_002287314.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976430|gb|EED94757.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 349
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 126/345 (36%), Positives = 180/345 (52%), Gaps = 23/345 (6%)
Query: 60 SSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK 119
++VS F++ S+A LIV GGH +GF LAK L S ++T +T+ +++
Sbjct: 15 TTVSGFSLSMSSA-----LIVQNKGGGHGELGFQLAKN-LSSNSKITSITILQDSACNAA 68
Query: 120 KPPFNRFN------EIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGK--NLDAVRPVA 171
K PF + +IV A +++ +++G ++D V DN K + A + V
Sbjct: 69 KEPFASYATDIPNVKIVKADFADESMTASDMQSLLGQ-SYDYVWDNASKKASCGAGKAVI 127
Query: 172 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQ 231
D K K ++SSAGIYKP DE P E VK AG V+ EKY E + SFRPQ
Sbjct: 128 DCVKEWNSKLLTYVSSAGIYKPKDEFPMPETTPVKDTAGQVEYEKYAVEKGLPFVSFRPQ 187
Query: 232 YMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA-S 289
Y+ G +NK D +W+FDR+VR P+PIPG G Q ++ + D++S+L + + AA
Sbjct: 188 YIYGEKSNKWDYIDWYFDRLVRGEPLPIPGDGSQKVSLTNSEDVASLLASVLNDESAAVG 247
Query: 290 SNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPR 348
FN +D+ VT D +A +CA+ AG + +I HYD K FPFR FY P
Sbjct: 248 QTFFNCGTDQLVTYDEVALMCAEVAGVMDAKIHHYDDSL----GKAKFPFRLTDFYVSPD 303
Query: 349 AAKDILGWRSTTN-LPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
AK LGW + L EDL F+ Y G K M F D ++L
Sbjct: 304 MAKAKLGWEGAKHSLKEDLTWYFDSYKARGGPAKEMTFVEDKEVL 348
>gi|307104990|gb|EFN53241.1| hypothetical protein CHLNCDRAFT_36589 [Chlorella variabilis]
Length = 407
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/345 (35%), Positives = 186/345 (53%), Gaps = 28/345 (8%)
Query: 66 TVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD--------ENSDK 117
TV ++A KK+L++ GG IG YLA++L+ +GHEVT++T G +++D+
Sbjct: 70 TVMSAAVAPKKILML----GGTRFIGLYLARQLIEAGHEVTLLTRGKKPVTYRIPDDTDE 125
Query: 118 MKKPPFNRFNEIVS--AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAK 175
F +F + V A +T D + + F+VV D NG+ D V D
Sbjct: 126 ----SFAKFEQSVKHIACDRT---DAEAMKTHLQNKGFEVVYDINGREADECALVLDAV- 177
Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQY 232
++Q++F SSAG+YK +D+ PH E D V + H + E+ + + NW S RP Y
Sbjct: 178 -GPIQQYIFCSSAGVYKKSDQMPHREEDEVDFKSRHKGKLFTEELLEQRGINWTSVRPVY 236
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G N EE+FF RI RP+ +PGSGMQ T + HV+DL++ + NP+AA +
Sbjct: 237 IYGPLNYNPVEEFFFHRIKAGRPICVPGSGMQVTQLGHVKDLATAFVKILGNPKAA-RQV 295
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAK 351
+N+ +R VT DG+AK CA A G P E+VH++PK KAFP R+ HF+A A
Sbjct: 296 YNVAGERYVTFDGLAKACAAAMGAPEPELVHFNPKDFDFGKAKAFPMRDQHFFASVDKAM 355
Query: 352 DILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLK 396
L W L + L++ +E+ G +K + DD +LE +K
Sbjct: 356 ADLDWVPEFGLLDGLRDSYEKDFGRGTFRKEPDYTADDMVLERVK 400
>gi|452825058|gb|EME32057.1| NAD-dependent epimerase/dehydratase [Galdieria sulphuraria]
Length = 378
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/327 (36%), Positives = 179/327 (54%), Gaps = 19/327 (5%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGD----ENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
GG G Y+A+EL SGH+V + G + S K++ F +S + GD
Sbjct: 49 GGTRFSGLYIARELALSGHQVVLFNRGSVPIGDISLKIRGETEKDFQTRMS-NTHLIKGD 107
Query: 141 ---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP 197
P ++ VV +D + DNNG+ L +P D S ++ ++++SSAG+YK +
Sbjct: 108 RTHPQDILRVVQSEKWDAIFDNNGRELSDSKPWIDGLGHS-IQHYMYMSSAGVYKESGLL 166
Query: 198 PHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKR 254
PH E D V ++ H ++ E+Y+ ++ + RP Y+ G N EEWFF RI + R
Sbjct: 167 PHREEDAVDHNSRHKGKLETEQYLKQSGIPFTCIRPTYIYGPRNYNPVEEWFFKRIDQNR 226
Query: 255 PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA 314
P+PIPG G+ T + HV DL+ + LA+ N +A S +N+ +VT DG AKLCA AA
Sbjct: 227 PIPIPGHGLHITGLGHVEDLAKAMVLALGNQQAVSQT-YNIQGRYSVTFDGFAKLCAIAA 285
Query: 315 GL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 371
G +E++HYDPK KK+FPFR HF+ A+ L W+ +L LK+ +E
Sbjct: 286 GKDPNKLELIHYDPKKV-PKDKKSFPFRPQHFFCSCAKAERELQWKERWDLVSGLKDSYE 344
Query: 372 -EYV-KIGRDKKAMQFEIDDKILESLK 396
+++ K R+ + F +DD+ILESLK
Sbjct: 345 NDFIEKKKRNAISFDFSLDDQILESLK 371
>gi|24251257|gb|AAN46177.1| unknown protein [Synechococcus elongatus PCC 7942]
Length = 313
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 112/331 (33%), Positives = 175/331 (52%), Gaps = 34/331 (10%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++L++ GG IG L ++LL +GH VT+ FNR + AG +
Sbjct: 2 RILVI----GGSRFIGVALVRQLLAAGHAVTV---------------FNRGSRPALAGVE 42
Query: 136 TVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG-VKQFLFISSAGIY 191
+ GD PA + + G +FDVV DN G+ +A A A G +Q +++SSAG+Y
Sbjct: 43 QLVGDRQDPAALAQL-QGRSFDVVFDNTGR--EAAETQALVASLDGQFQQLIYVSSAGVY 99
Query: 192 KPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
+D+ P E D V P + H + E ++ + + +FRP Y+ G GN E+W
Sbjct: 100 AASDQLPLRESDPVDPQSRHRGKFETENWLQQQGLPFTAFRPVYIYGPGNYNPLEQWSSI 159
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
P+PIPG+G+ T + HV DL++ + AV+NP A I+NL DR V+ DG+A+
Sbjct: 160 AFCVIGPLPIPGTGLHLTQLGHVEDLATAMVAAVKNPRAI-GQIYNLSGDRYVSFDGLAR 218
Query: 309 LCAQAAG---LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
CA AAG + +VHYDPK + +KAFP R HF A+ L W +L +
Sbjct: 219 ACAIAAGRDPQALHLVHYDPKQLNLGKRKAFPMRAQHFITAIDQARQDLEWVPRFSLIDG 278
Query: 366 LKERFE-EYVKIGRDKKAMQFEIDDKILESL 395
L+ + +Y+ G D++A+ F +D++IL ++
Sbjct: 279 LQNSLQNDYLARGLDQQAVDFSLDEEILAAV 309
>gi|219111441|ref|XP_002177472.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217412007|gb|EEC51935.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 404
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/388 (33%), Positives = 201/388 (51%), Gaps = 25/388 (6%)
Query: 31 LSFSSYSHLSSLVSI-SPSSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAV 89
+S + ++ S+LV++ S S+F+ + S+ SA T + LIV GGH
Sbjct: 1 MSLTRWAFASTLVTLFSASAFVPQHSRSKSHHGSAATTHLYMS---AALIVQNKGGGHGE 57
Query: 90 IGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFN------EIVSAGGKTVWGDPAE 143
+GF LAK +L ++T +T+ +++ K PF + ++V A
Sbjct: 58 LGFQLAK-VLSDNDKITSVTILQDDACKDSAEPFQSYATDLPDVKVVKASLGDESMTATA 116
Query: 144 VGNVVG-GVTFDVVLDNNGKN-LDAVRPVADWAKSSGVKQFLFISSAGIYKP-ADEP-PH 199
+ +++G FD V DN K+ A + + D AK+ VK F ++SSAG+Y+P AD P P
Sbjct: 117 LQDILGKDAAFDYVWDNASKSPKGAGQAICDLAKAWNVKLFTYVSSAGMYQPTADAPFPM 176
Query: 200 VEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPI 258
E +K AG Q ++Y + +FRPQY+ G NK D +W+FDR+VR+ P+PI
Sbjct: 177 PETTPIKESAGQNQFDQYAIQQGLPLVTFRPQYIYGPKANKHDYIDWYFDRLVRELPLPI 236
Query: 259 PGSGMQFTNIAHVRDLSSMLTLAVENPEAA-SSNIFNLVSDRAVTLDGMAKLCAQAAGL- 316
PG G Q ++ + D++S+L + + AA + +FN +D+ V+ D +A LCA+AAG+
Sbjct: 237 PGDGTQKLSLTNAEDVASLLAAPLNDEAAAIAQRVFNCGTDQLVSYDEVAYLCAEAAGID 296
Query: 317 --PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTN-LPEDLKE-RFEE 372
V I HYD G K FPFR FY P AK+ LGW + L +DL+ +E
Sbjct: 297 KDKVMIEHYDADMFG---KATFPFRMTDFYVAPDTAKEKLGWSGPLHSLKDDLQSFYYES 353
Query: 373 YVKIGRDKKAMQFEIDDKILESLKVPIP 400
YV G K M D +I K +P
Sbjct: 354 YVARGGPTKKMSLIKDWEITVGSKTSLP 381
>gi|299115197|emb|CBN74028.1| 38 kDa ribosome-associated protein precursor [Ectocarpus
siliculosus]
Length = 383
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 181/361 (50%), Gaps = 27/361 (7%)
Query: 48 SSFLACPASSRRSSVSAFTVKASAAE-KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVT 106
+ F P + R + + +++ +AAE K++VL++ GG G YL KEL GHEV
Sbjct: 23 AGFALSPNAMRTGARPSSSLRMAAAEGKQRVLVI----GGTRFSGLYLTKELHSRGHEVV 78
Query: 107 IMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGVTFDVVLDNNGKN 163
+ G + ++ + + V KT+ GD P + +GG FD V D N +
Sbjct: 79 LYNRGQTANKQLPCESDAEYAKRVE-DVKTIVGDRKDPEVCQSTLGGEKFDAVFDMNARE 137
Query: 164 LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISE 220
+ + VAD K V ++F+SSAG+Y ++ PH E D P + H + E Y+ E
Sbjct: 138 VSDTKAVADVFKGK-VDHYVFMSSAGVYLKSELMPHREEDATDPKSRHKGKFESEAYLEE 196
Query: 221 NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
+ S RP Y+ G N E++FF+R+ + R V +PG G T + HV+DL+ +
Sbjct: 197 IGMPYTSIRPTYIYGPLNYNPLEQYFFERLDQDRTVIVPGHGQHLTGLGHVKDLARAMA- 255
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG---LPVEIVHYDPKAAGIDAKKAFP 337
V E+A ++N+ +RA++ DGM + CA+A G V+I H++P KKAFP
Sbjct: 256 NVLGKESAKGQVYNVQDNRAISFDGMVRACAEAMGKDPAAVKIKHFEPTNFDFGKKKAFP 315
Query: 338 FRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAM-----QFEIDDKI 391
R HF+ A L W N + L++ +E ++V KKA FE DDK+
Sbjct: 316 MRPGHFFTSCEKAMTDLDWAPEFNTVDGLRDSYENDFVH----KKAAGGLNNDFECDDKV 371
Query: 392 L 392
L
Sbjct: 372 L 372
>gi|121077622|gb|ABM47306.1| chloroplast ribosome-associated protein [Volvox carteri f.
nagariensis]
Length = 206
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 114/178 (64%), Gaps = 6/178 (3%)
Query: 77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT 136
VLI NT GGHA IG YLAKELL GH+VTIM GDE S KK PF++++E+ G
Sbjct: 33 VLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGDE-SKLTKKTPFSKYSELARDGATI 91
Query: 137 VWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD- 195
WGDP + G +FDVV DNNGK+L + +P+ D K V ++F+SSAG YK AD
Sbjct: 92 AWGDPTKPSTYPRG-SFDVVYDNNGKDLSSCQPMIDHFKHK-VDHYVFVSSAGAYK-ADS 148
Query: 196 -EPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
EP HVEGD K AGHV+VE Y+ + + F+P Y+ G KDCE+WF DRI+R
Sbjct: 149 IEPMHVEGDARKSTAGHVEVEAYLEKARVPYTVFQPLYIYGPNTAKDCEQWFVDRIIR 206
>gi|422293604|gb|EKU20904.1| nad-dependent epimerase dehydratase [Nannochloropsis gaditana
CCMP526]
Length = 354
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/340 (33%), Positives = 168/340 (49%), Gaps = 19/340 (5%)
Query: 66 TVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNR 125
T+KA A KKVLI+ GG G YL KEL G+++T+ G + +
Sbjct: 25 TMKAPGA-GKKVLII----GGTRFSGLYLFKELHDRGYDITLFNRGKTANRPVPGESAES 79
Query: 126 FNEIVSAGGKTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQF 182
+ E + V GD P ++ + FDV+ D NG+ +P+AD A + V F
Sbjct: 80 YAERIGQA-TFVKGDRTNPDDLAALAKAHEFDVIYDMNGREKTDTQPLAD-AYNGRVDHF 137
Query: 183 LFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNN 239
+++SSAG+Y +D PH E D V P + H + E Y++E + S RP Y+ G N
Sbjct: 138 VYMSSAGVYLKSDLMPHKETDPVDPKSRHKGKFETETYLAEKGLPFTSIRPTYIYGPQNY 197
Query: 240 KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
EE+FF R+V R V +PG G T + HV+DL++ + + E A ++N+ +
Sbjct: 198 NPLEEYFFHRVVAGRAVAVPGHGQHLTGLGHVKDLATAMAQVIGR-EQAKGQVYNVQHPQ 256
Query: 300 AVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW 356
A+T DG +L A+AAG VEIVHYDPK KKAFP R HF+ A L W
Sbjct: 257 AITFDGAVRLAAKAAGKDPESVEIVHYDPKEYDFGKKKAFPMRPQHFFTSVEKAMRDLDW 316
Query: 357 RSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLK 396
E ++ F++ + + FE D+ +L K
Sbjct: 317 TPAYGNTEGWQDSFDQDYALRTHEP--DFECDEVVLAGKK 354
>gi|242041721|ref|XP_002468255.1| hypothetical protein SORBIDRAFT_01g042510 [Sorghum bicolor]
gi|241922109|gb|EER95253.1| hypothetical protein SORBIDRAFT_01g042510 [Sorghum bicolor]
Length = 189
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 97/170 (57%), Gaps = 43/170 (25%)
Query: 210 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD--------------------- 248
GHV VEKYI+E F +WASFRPQYMIGS NNKDCEEWFFD
Sbjct: 12 GHVVVEKYIAEQFGSWASFRPQYMIGSSNNKDCEEWFFDSNNNNQQPVTPFNPVVFSSLP 71
Query: 249 ------------------RIVRKRPVPI-PGS-GMQFTNIAHVRDLSSMLTLAVENPEAA 288
R R P PG Q TNIAHVRDLS ML+L+VE P AA
Sbjct: 72 AAVHDRLQQQQGLRGVVLRQDRTEPAGADPGERDAQLTNIAHVRDLSRMLSLSVEKPGAA 131
Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 338
IFN VSDRAVTL GM KLCA AG VEIV DP AAG+D KKAFPF
Sbjct: 132 LGKIFNCVSDRAVTLSGMNKLCAAGAG--VEIVLNDPAAAGVDDKKAFPF 179
>gi|318041621|ref|ZP_07973577.1| nucleotide sugar epimerase [Synechococcus sp. CB0101]
Length = 314
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 161/311 (51%), Gaps = 30/311 (9%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
+ K+L++ GG +G L +LL GH +T+ F R N+ V AG
Sbjct: 9 RVKILVM----GGTRFVGKPLVAQLLSEGHALTL---------------FTRGNKPVPAG 49
Query: 134 GKTVWGD--PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + GD AE + G +FDV++D++G+ LD R V + + +FL++SSAG+Y
Sbjct: 50 VEHLCGDRSTAEGLAALQGRSFDVIVDSSGRTLDDSRAVIERTGAPS-HRFLYVSSAGVY 108
Query: 192 KPADEPPHVEGDVVKP---DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
++ P E P +G + E +++ + SFRP Y++G+GN E WFFD
Sbjct: 109 ADSELWPLNEDSPTDPLSRHSGKLDTEAWLTAEKIPFTSFRPTYIVGAGNYNPVESWFFD 168
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RIV RPVP+PG G T + HV DL++ + L++ +AA++ I+N S + +T G+
Sbjct: 169 RIVHGRPVPLPGDGSTITQLGHVNDLATAMALSL-GVDAAANRIYNCSSVQGITFKGLVA 227
Query: 309 LCAQAAG---LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
A+A G VEI +DP A+KAFP R HF + + L W T ++ +
Sbjct: 228 AAARACGKDPASVEIRSFDPAGLDKKARKAFPLRQAHFLTDVTRVQRELAWTPTYSVEQA 287
Query: 366 LKERF-EEYVK 375
L + + +Y K
Sbjct: 288 LVDSYSNDYAK 298
>gi|428171867|gb|EKX40780.1| hypothetical protein GUITHDRAFT_96197 [Guillardia theta CCMP2712]
Length = 341
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 150/303 (49%), Gaps = 21/303 (6%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
K+ VLI+ GG G YL KEL+ GH+VT+ G + + + + +
Sbjct: 3 KESVLII----GGTRFSGAYLWKELVDRGHQVTLYNRGKTSPKPLPGESESDYKRRLETT 58
Query: 134 GKTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADW--AKSSGVKQFLFISSA 188
K + GD P ++ N+V + V D NG+ P+AD S +K F+++SSA
Sbjct: 59 -KYLMGDRKDPEQIKNLVDPSLYTYVYDMNGREASDTAPLADLFTTSRSELKSFIYMSSA 117
Query: 189 GIYKPADEPPHVEGDVVKPDAGH---VQVEKYISE---NFSNWASFRPQYMIGSGNNKDC 242
G+YK + E PH+E D V P + H ++ E Y+ NF NW S RP Y+ G N
Sbjct: 118 GVYKKSSEMPHMEHDAVDPKSRHKGKLETEAYLRSLGGNF-NWCSIRPTYICGPQNYNVV 176
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
E++F +R KR +PG G T HV+DL+ + + + + ++N+ + A+T
Sbjct: 177 EQYFLERADAKRGFIVPGHGEHLTGFGHVKDLAVAMANVIGREKKTNGQVYNIQNTNAIT 236
Query: 303 LDGMAKLCAQAAGL---PVEIVHYDPKAAGI-DAKKAFPFRNMHFYAEPRAAKDILGWRS 358
DG ++ A+ G VEIVHY+PK + KKAFP R HF+ A+ L W
Sbjct: 237 FDGACRVAAEVVGTNPDDVEIVHYNPKEFKFPEGKKAFPMRPQHFFTNVDKARRDLEWEP 296
Query: 359 TTN 361
N
Sbjct: 297 MFN 299
>gi|77024145|gb|ABA55543.1| chloroplast mRNA binding protein csp41 [Karlodinium micrum]
Length = 428
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 175/341 (51%), Gaps = 17/341 (4%)
Query: 58 RRSSVSAFTVKASAAEK-KKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENS 115
R SVS ASAA K LI+ GGH IGF+LA +L G +V I+ G E
Sbjct: 95 RHGSVSML---ASAASKVDSALIIQNKGGGHGEIGFHLALQLAKERGMKVMILHEGPE-- 149
Query: 116 DKMKKPPFNRFNEIVSAGGKTVWGDPA---EVGNVVGGVTFDVVLDNNGKNLDAVRPVAD 172
K KPP + + E++SA +W D EV + F ++DN K+ D +RP A+
Sbjct: 150 -KASKPPHSAYAELLSANVDILWFDDLTRPEVLWFLDDKKFGAIIDNWSKSPDQIRPFAE 208
Query: 173 WAKSSGVKQFLFISSAGIYKP-ADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQ 231
AK V + ++SSAG+Y P A + + D +G Q E+ + E ++ FRPQ
Sbjct: 209 LAKKWEVANYAYVSSAGMYTPPAGDYGAISEDASVKSSGQRQAEELLEEMKLPYSCFRPQ 268
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
Y+ G K ++FFDR+ RPV +P G Q + H D ++M+ AV N EAA+
Sbjct: 269 YIYGPKQGKSYLKYFFDRLTNGRPVLVPNGGDQQVTMTHAADNAAMIAAAVGN-EAAAGE 327
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAK 351
+FN + +T D + +CA+A G+ +IVHY+PK I K FPFR+ F+ A
Sbjct: 328 VFNCATSTLITYDDLVDICAKAVGVEPKIVHYNPKDFEI-PKGFFPFRDAPFFVSVDKAA 386
Query: 352 DILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
D LG+ L D++ F + +++ F +DD+IL
Sbjct: 387 DKLGFAPKHLLASDIEWYFTNNYQ---SSESLDFSLDDEIL 424
>gi|317970075|ref|ZP_07971465.1| nucleotide sugar epimerase [Synechococcus sp. CB0205]
Length = 306
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 167/326 (51%), Gaps = 32/326 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+L++ GG +G L ++L +GH +T+ T G K P V AG +
Sbjct: 2 KILVM----GGTRFVGRPLVQQLQDAGHALTLFTRG-------KNP--------VPAGVE 42
Query: 136 TVWGD--PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
+ GD AE + + G FDV++D++G+ + R V + + +F+++SSAG+Y
Sbjct: 43 HLCGDRSTAEGLSALAGRQFDVIVDSSGRTVTDSRSVVE-VTGAPSHRFVYVSSAGVYAD 101
Query: 194 ADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRI 250
+ P E P++ H + E +++ + SFRP Y++G+GN E WFFDRI
Sbjct: 102 SALWPLTENSPTDPESRHSGKLDTEAWLTAEKIPFTSFRPTYIVGAGNYNPVESWFFDRI 161
Query: 251 VRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC 310
V RPVP+PG G T + HV DL++ + L++ +AA++ I+N S + ++ G+
Sbjct: 162 VHGRPVPLPGDGSTITQLGHVNDLATAMALSI-GVDAAANRIYNCSSAQGISFRGLVAAA 220
Query: 311 AQAAG---LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLK 367
A+A G VEI +DP + A+KAFP R HF + + L W ++ L
Sbjct: 221 ARACGKDPASVEIRSFDPSSLDKKARKAFPLRMAHFLTDIHRVQRELAWTPQYDVERSLA 280
Query: 368 ERF-EEYVKIGRDKKAMQFEIDDKIL 392
+ + +Y K R + F DD++L
Sbjct: 281 DSYSNDYAK--RMPTSPDFSSDDQLL 304
>gi|219128200|ref|XP_002184306.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404107|gb|EEC44055.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 361
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 165/346 (47%), Gaps = 17/346 (4%)
Query: 64 AFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF 123
AF + + VLI+ GG G L KEL GH VT+ G + + +
Sbjct: 8 AFLCLWAITDAYNVLII----GGTRFSGAALWKELYDRGHTVTVYNRGKTPAQAVVRESV 63
Query: 124 NRFNEIVSAGG--KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVAD-WAKSSGVK 180
+ F+ + A + DP ++ ++ +D V D N + +P+A + S +K
Sbjct: 64 DDFDARIRAATFLQGDRQDPEQLRRLIDPDRYDYVYDMNAREEPDTKPLASLFVGHSQLK 123
Query: 181 QFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSG 237
Q++F+SSAG+Y +DE PH+E D V ++ H ++ E + W SFRP Y+ G G
Sbjct: 124 QYVFMSSAGVYLLSDEMPHLETDAVDANSRHKGKLESEACLQALGIPWCSFRPTYICGPG 183
Query: 238 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
N E +FF+R+ RPV +P G T + HV DL+ + V+ + +N+ +
Sbjct: 184 NYNPVERYFFERLEAGRPVCVPSHGQHLTGLGHVEDLAVAMANVVDRHTVTTGKTYNVQN 243
Query: 298 DRAVTLDGMAKLCAQAAGLP---VEIVHYDPKAAGIDA-KKAFPFRNMHFYAEPRAAKDI 353
+A+T DG+ + A G VEIVHYDP A KAFP R HF+ A
Sbjct: 244 RQAITFDGVVRTAAAVTGRARDSVEIVHYDPGTVEFPAGAKAFPMRPQHFFCGVERAVQD 303
Query: 354 LGWRSTTNLPED-LKERFEEYVKIGRDKKAMQ--FEIDDKILESLK 396
L W + E L++ +E + RD ++ F DD +L+ ++
Sbjct: 304 LEWTPRFDTVEAILRDSYENDFVLLRDSGGLRDDFVCDDIVLQKIQ 349
>gi|254431964|ref|ZP_05045667.1| possible nucleotide sugar epimerase [Cyanobium sp. PCC 7001]
gi|197626417|gb|EDY38976.1| possible nucleotide sugar epimerase [Cyanobium sp. PCC 7001]
Length = 308
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 157/316 (49%), Gaps = 26/316 (8%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G L ++LL +GH +T+ T G + P V AG + + GD +
Sbjct: 7 GGTRFVGKPLVEQLLAAGHGLTLFTRG-------RNP--------VPAGVEHLVGDRSAP 51
Query: 145 GNV--VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
++ + G F V++D++G+ L R V + + +F+++SSAG+Y ++ P E
Sbjct: 52 EDLAPLAGRRFAVIVDSSGRTLADSRAVLE-RTGAPEHRFVYVSSAGVYADSELWPLDED 110
Query: 203 DVVKP---DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP 259
P AG + E ++ + + SFRP Y++G GN E WFFDRI+ RPVP+P
Sbjct: 111 SPTDPASRHAGKAETETWLRQQGIPFTSFRPTYIVGPGNYNPVERWFFDRILHGRPVPLP 170
Query: 260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG---L 316
G G T + HVRDL++ + +E EA+++ I+N + VT G+ + A+A G
Sbjct: 171 GDGSTITQLGHVRDLATAMARCIEV-EASANRIYNCTGTKGVTFRGLVEAAARACGQDPA 229
Query: 317 PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI 376
VE+ +DP A+KAFP R HF + + L W +L L++ + +
Sbjct: 230 AVEVRSFDPGGLDKKARKAFPLRLAHFLTDTTRVRRELAWEPAFDLDAILRDSYVHDYAL 289
Query: 377 GRDKKAMQFEIDDKIL 392
R F DD +L
Sbjct: 290 -RAPVTPDFSTDDALL 304
>gi|116070996|ref|ZP_01468265.1| possible nucleotide sugar epimerase [Synechococcus sp. BL107]
gi|116066401|gb|EAU72158.1| possible nucleotide sugar epimerase [Synechococcus sp. BL107]
Length = 306
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 145/294 (49%), Gaps = 25/294 (8%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA-- 142
GG +G L L+ GH +T+ T G K P V AG + + GD +
Sbjct: 7 GGTRFVGKPLVARLMAQGHALTLFTRG-------KNP--------VPAGVEHITGDRSND 51
Query: 143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
E N + G FDV++D++G+ LD R V A +F+++SSAG+Y +D P E
Sbjct: 52 EGLNPLQGRAFDVIVDSSGRTLDDSRRVL-MATGHPRHRFVYVSSAGVYAGSDHWPLDEN 110
Query: 203 DVVKP---DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP 259
P AG E +++ + SFRP Y+ G GN E WFFDRIV ++PVP+P
Sbjct: 111 SPTDPKSRHAGKADTEAWLTAEGVPFTSFRPTYIYGPGNYNPVERWFFDRIVHEQPVPLP 170
Query: 260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 319
G G T + HV DL+ + ++ +AA++ I+N + VT +G+ + AQA G +
Sbjct: 171 GDGTTITQLGHVDDLAEAMARCIDV-DAAANRIYNCSGKQGVTFEGLIRAAAQACGKDPQ 229
Query: 320 IV---HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 370
V +DP A A+KAFP R HF + + L W +L L + F
Sbjct: 230 TVVMRSFDPSALDPKARKAFPLRLNHFLTDITRVERELAWHPRFDLAAGLADSF 283
>gi|78184353|ref|YP_376788.1| nucleotide sugar epimerase [Synechococcus sp. CC9902]
gi|78168647|gb|ABB25744.1| possible nucleotide sugar epimerase [Synechococcus sp. CC9902]
Length = 306
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 145/294 (49%), Gaps = 25/294 (8%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA-- 142
GG +G L L+ GH +T+ T G K P V AG + + GD +
Sbjct: 7 GGTRFVGKPLVARLMAQGHALTLFTRG-------KNP--------VPAGVEHITGDRSSD 51
Query: 143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
E + + G FDV++D++G+ LD R V A +F+++SSAG+Y +D P E
Sbjct: 52 EGLSALQGRAFDVIVDSSGRTLDDSRRVLT-ATGHPRHRFVYVSSAGVYAGSDHWPLDEN 110
Query: 203 DVVKP---DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP 259
P AG E +++ + SFRP Y+ G GN E WFFDRIV ++PVP+P
Sbjct: 111 SPTDPKSRHAGKADTEAWLTAEGVPFTSFRPTYIYGPGNYNPIERWFFDRIVHEQPVPLP 170
Query: 260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 319
G G T + HV DL+ + ++ +AA++ I+N + VT +G+ + AQA G E
Sbjct: 171 GDGTTITQLGHVDDLAEAMARCIDV-DAAANRIYNCSGKQGVTFEGLIRAAAQACGKDPE 229
Query: 320 IV---HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 370
V +DP A A+KAFP R HF + + L W +L L + +
Sbjct: 230 TVVMQSFDPSALDPKARKAFPLRLNHFLTDITRVERELAWHPQFDLAAGLADSY 283
>gi|33862792|ref|NP_894352.1| mRNA binding protein [Prochlorococcus marinus str. MIT 9313]
gi|33634708|emb|CAE20694.1| possible mRNA-binding protein [Prochlorococcus marinus str. MIT
9313]
Length = 341
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 157/321 (48%), Gaps = 35/321 (10%)
Query: 59 RSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM 118
R+S+ AF A K+LI+ GG +G L L GH +T+ T G +
Sbjct: 24 RASICAFDDSAVL----KILIM----GGTRFVGKPLVTRLQAQGHALTLFTRGRHS---- 71
Query: 119 KKPPFNRFNEIVSAGGKTVWGDPA--EVGNVVGGVTFDVVLDNNGKNL-DAVRPVADWAK 175
+ G + + GD E + + G +FDV++D++G+ L D+ R VA
Sbjct: 72 -----------LPDGVEHLSGDRTTPEGLSRLQGRSFDVIVDSSGRKLEDSQRVVA--CT 118
Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENFSNWASFRPQY 232
+FL++SSAG+Y ++E P E P+ AG Q E ++ + + SFRP Y
Sbjct: 119 GEPKHRFLYVSSAGVYADSEEWPLNEESATDPNSRHAGKAQTESWLLQQGIPFTSFRPTY 178
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G GN E WFFDRIV RPVP+P G T + HV DL+ + ++E E A++ I
Sbjct: 179 IYGPGNYNPIERWFFDRIVHNRPVPLPRDGTTITQLGHVVDLADAMVRSLEV-ETATNRI 237
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRA 349
+N S R +T G+ A+A G VE+ +DP A+KAFP R HF +
Sbjct: 238 YNCSSKRGITFRGLIAAAARACGKDPNAVELRSFDPSGLNPKARKAFPLRLSHFLTDITR 297
Query: 350 AKDILGWRSTTNLPEDLKERF 370
+ L W+ +L L++ +
Sbjct: 298 VERELAWQPRFDLETGLEDSY 318
>gi|427702066|ref|YP_007045288.1| nucleoside-diphosphate-sugar epimerase [Cyanobium gracile PCC 6307]
gi|427345234|gb|AFY27947.1| nucleoside-diphosphate-sugar epimerase [Cyanobium gracile PCC 6307]
Length = 305
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 144/294 (48%), Gaps = 25/294 (8%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--PA 142
GG +G L LLG+GHE+++ F R + V AG + + GD A
Sbjct: 7 GGTRFVGRPLVNRLLGAGHELSL---------------FTRGRQPVPAGVEHLQGDRSSA 51
Query: 143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
E + FDV++D++G+ L+ R V + + +++SSAG+Y ++ P E
Sbjct: 52 EGLAALQDRPFDVIVDSSGRTLEDTRQVIERTGPPS-HRLVYVSSAGVYADSELWPLDED 110
Query: 203 DVVKPD---AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP 259
P AG + E ++ + + SFRP Y++G GN E WFFDR+V RPVP+P
Sbjct: 111 SPTDPQSRHAGKLDTEAWLRQEGIPFTSFRPTYIVGPGNYNPVESWFFDRLVHGRPVPLP 170
Query: 260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL--- 316
G G T + HV DL++ + +E EAA++ I+N + ++ G+ A+A G
Sbjct: 171 GDGSTITQLGHVADLAAAMARCIEV-EAATNRIYNCTGSQGISFRGLVAAAARACGTDPE 229
Query: 317 PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 370
VE+ +DP A+KAFP R HF + + L W +L L + +
Sbjct: 230 AVEVRSFDPAGLDKKARKAFPLRLAHFLTDTHRVRRELAWEPAFDLEATLADSY 283
>gi|87303508|ref|ZP_01086291.1| Possible nucleotide sugar epimerase [Synechococcus sp. WH 5701]
gi|87281921|gb|EAQ73884.1| Possible nucleotide sugar epimerase [Synechococcus sp. WH 5701]
Length = 308
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 155/314 (49%), Gaps = 22/314 (7%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG L +LL +GHE+T+ T G + P E +S G ++ DPA +
Sbjct: 9 GGTRFIGKPLVAQLLAAGHELTLFTRG--------RQPLPEGVEHLS-GDRS---DPAAL 56
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
+ G FDV++D++G++ + V + + + F+++SSAG+Y ++ P E
Sbjct: 57 -EPLRGRAFDVIIDSSGRSCADSQAVVERTGAPSYR-FVYVSSAGVYADSELWPLDEEAT 114
Query: 205 VKP---DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS 261
P AG + E ++ + + SFRP Y+ G GN E WFFDRIV +PVP+PG
Sbjct: 115 TDPASRHAGKLDTEAWLRQQAIPFTSFRPTYIYGPGNYNPVESWFFDRIVHGQPVPLPGD 174
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PV 318
G T + HV DL++ + L ++ EAA++ I+N + VT G+ A+A G+ V
Sbjct: 175 GSTITQLGHVSDLATAMALCLDV-EAAANRIYNCSGAKGVTFRGLVAAAAKACGVEPEAV 233
Query: 319 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGR 378
EI +DP A+KAFP R HF + + L W +L L + + + R
Sbjct: 234 EIRSFDPSGLDKKARKAFPLRLAHFLTDIHRVQRELAWSPAFDLEAGLADSYSNDYAL-R 292
Query: 379 DKKAMQFEIDDKIL 392
F D +L
Sbjct: 293 GATTPDFSSDQALL 306
>gi|352094422|ref|ZP_08955593.1| NAD-dependent epimerase/dehydratase [Synechococcus sp. WH 8016]
gi|351680762|gb|EHA63894.1| NAD-dependent epimerase/dehydratase [Synechococcus sp. WH 8016]
Length = 315
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 154/308 (50%), Gaps = 29/308 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+L++ GG +G L L GH +T+ T G ++ P G +
Sbjct: 10 KILVM----GGTRFVGKPLVARLQEQGHALTLFTRG-----RLPAP----------EGVE 50
Query: 136 TVWGDPAEVGNV--VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
+V GD + ++ + G TF+VV+D++G++LD R V + +FL++SSAG+Y
Sbjct: 51 SVRGDRSVDADLDQLKGRTFEVVIDSSGRSLDDSRRVLA-VTGAPAHRFLYVSSAGVYAA 109
Query: 194 ADEPPHVEGDVVKP---DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRI 250
+ + P E + P +G E+++ E + SFRP Y++G GN E WFFDRI
Sbjct: 110 STQWPLDETAAIDPASRHSGKADTEQWLQEQGIPFTSFRPTYIVGPGNYNPVERWFFDRI 169
Query: 251 VRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC 310
V RP+P+PGSG T I H DL+ + ++E +AAS+ I+N + R +T G+ +
Sbjct: 170 VNDRPIPLPGSGETITQIGHAEDLAEAMARSLEV-DAASNRIYNCSASRGITFRGLIEAA 228
Query: 311 AQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLK 367
A A G +++ +DP A+KAFP R HF + + L W + L
Sbjct: 229 AVACGRDPKGLDLRPFDPSGLDPKARKAFPLRLSHFLTDTTRVRRELAWEPRFDACASLA 288
Query: 368 ERFEEYVK 375
+ ++ K
Sbjct: 289 DSYQREYK 296
>gi|77024085|gb|ABA55513.1| chloroplast mRNA binding protein csp41 [Isochrysis galbana]
Length = 313
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 126/241 (52%), Gaps = 11/241 (4%)
Query: 100 GSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----PAEVGNVVGGVTFDV 155
G G VTI+ E K + ++ +AG + +W D E +GG TF
Sbjct: 5 GQGRPVTIL---HEGKGPNAKEAHRAYGDLDAAGVQVLWCDDLTNAPECLAKLGGATFGS 61
Query: 156 VLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA--DEPPHVEGDVVKPDAGHVQ 213
V+DN K+ + ++P A AK GV F ++SSAG+Y PA D P E VK G Q
Sbjct: 62 VVDNWSKSPEDIQPYAQAAKDWGVSTFAYVSSAGMYNPAKGDFSPITEECPVK-STGQRQ 120
Query: 214 VEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD 273
E+ + E W FRPQY+ G K +FFDR+ R P+P+PG G Q ++ H D
Sbjct: 121 AEEKLGEMELPWTCFRPQYVYGPKQGKSYLAYFFDRLTRGAPIPVPGDGNQIVSMTHAAD 180
Query: 274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 333
++M+ A++N EAA +FN + +T D +A LCA+A G+ +I HYDP A G +
Sbjct: 181 NAAMIATAIDN-EAAVGQVFNCATSAVITYDDLALLCARATGVEAKISHYDPAAVGGGSN 239
Query: 334 K 334
K
Sbjct: 240 K 240
>gi|124023447|ref|YP_001017754.1| mRNA binding protein [Prochlorococcus marinus str. MIT 9303]
gi|123963733|gb|ABM78489.1| possible mRNA binding protein [Prochlorococcus marinus str. MIT
9303]
Length = 341
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 155/321 (48%), Gaps = 35/321 (10%)
Query: 59 RSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM 118
R+S+ AF A K+LI+ GG +G L L GH +T+ T G +
Sbjct: 24 RASICAFDDSAVL----KILIM----GGTRFVGKPLVTRLQAQGHALTLFTRGRHS---- 71
Query: 119 KKPPFNRFNEIVSAGGKTVWGDPAEVGNV--VGGVTFDVVLDNNGKNL-DAVRPVADWAK 175
+ G + + GD + + G +FDV++D++G+ L D+ R VA
Sbjct: 72 -----------LPDGVEHLSGDRTTTEGLSRLQGRSFDVIVDSSGRKLEDSQRVVA--CT 118
Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENFSNWASFRPQY 232
+FL++SSAG+Y ++ P E P+ AG Q E ++ + + SFRP Y
Sbjct: 119 GEPKHRFLYVSSAGVYADSEHWPLNEESATDPNSRHAGKAQTESWLLQQGIPFTSFRPTY 178
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G GN E WFFDRIV RPVP+P G T + HV DL+ + ++E E A++ I
Sbjct: 179 IYGPGNYNPIERWFFDRIVHNRPVPLPRDGTTITQLGHVVDLADAMVRSLEV-ETATNRI 237
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRA 349
+N S R +T G+ A+A G VE+ +DP A+KAFP R HF +
Sbjct: 238 YNCSSKRGITFRGLIAAAARACGKDPNTVELRSFDPSGLNPKARKAFPLRLSHFLTDITR 297
Query: 350 AKDILGWRSTTNLPEDLKERF 370
+ L W+ +L L++ +
Sbjct: 298 VERELAWQPRFDLETGLEDSY 318
>gi|33240323|ref|NP_875265.1| mRNA binding protein [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33237850|gb|AAP99917.1| NAD dependent epimerase/dehydratase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 300
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 152/316 (48%), Gaps = 48/316 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMT-------------VGDENSDKMKKPPFNRFNEIVS 131
GG +G L +L GH++TI T GD N D+++K
Sbjct: 2 GGTRFVGKALLGKLQEQGHDLTIFTRGVNSLPSNVRHIQGDRNGDEIEK----------- 50
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ G+ FDV++D++G+ D + V D +FL++SSAGIY
Sbjct: 51 ----------------LNGLKFDVIIDSSGRTKDQTKKVLD-ITGPPANRFLYVSSAGIY 93
Query: 192 KPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
++ P E V ++ H+ + E ++ + + SFRP Y+ G+GN E+WFF+
Sbjct: 94 ADSETLPLTEDSKVDLESRHIGKAETENWLRLSKVPFTSFRPTYIYGAGNYNPIEKWFFE 153
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RI+ RP+PIP G T + HV DL+ ++L++E E +++ I+N +A+T G+
Sbjct: 154 RILNDRPIPIPNEGNTITQLGHVNDLAEAMSLSLEK-EVSNNRIYNCSGKKAITFRGLIY 212
Query: 309 LCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
A A G +++ +DP A+K FP R HF+ + ++ L W L E
Sbjct: 213 SSALACGKDPNDIKLFSFDPSKIDKKARKIFPLRLNHFFTDISLIENHLNWSPRIELNEG 272
Query: 366 LKERFEEYVKIGRDKK 381
L+E F+ I +++K
Sbjct: 273 LRESFQNDYLINKNEK 288
>gi|113955374|ref|YP_730928.1| nucleotide sugar epimerase [Synechococcus sp. CC9311]
gi|113882725|gb|ABI47683.1| Possible nucleotide sugar epimerase [Synechococcus sp. CC9311]
Length = 315
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 153/308 (49%), Gaps = 29/308 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+L++ GG +G L L GH +T+ T G ++ P G +
Sbjct: 10 KILVM----GGTRFVGKPLVARLQDQGHALTLFTRG-----RLPSP----------EGVE 50
Query: 136 TVWGDPAEVGNV--VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
+V GD + ++ + G F+V++D++G++LD R V + +FL++SSAG+Y
Sbjct: 51 SVQGDRSVDADLEQLKGRGFEVIIDSSGRSLDDSRRVLAMTGAP-THRFLYVSSAGVYAA 109
Query: 194 ADEPPHVEGDVVKP---DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRI 250
+ + P E + P +G E+++ E + SFRP Y++G GN E WFFDRI
Sbjct: 110 STQWPLDETAAIDPASRHSGKADTEQWLQEQGIPFTSFRPTYIVGPGNYNPVERWFFDRI 169
Query: 251 VRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC 310
V RP+P+PGSG T I H DL+ + ++E +AAS+ I+N + R +T G+ +
Sbjct: 170 VNDRPIPLPGSGETITQIGHAEDLAEAMARSLEV-DAASNRIYNCSASRGITFRGLIEAA 228
Query: 311 AQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLK 367
A A G +++ +DP A+KAFP R HF + + L W + L
Sbjct: 229 AVACGRDPKSLDLRPFDPSGLDPKARKAFPLRLSHFLTDITRVRRELAWEPRFDACASLV 288
Query: 368 ERFEEYVK 375
+ ++ K
Sbjct: 289 DSYQREYK 296
>gi|115445775|ref|NP_001046667.1| Os02g0316800 [Oryza sativa Japonica Group]
gi|113536198|dbj|BAF08581.1| Os02g0316800, partial [Oryza sativa Japonica Group]
Length = 143
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 9/106 (8%)
Query: 168 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS 227
RPV DWAK++GV QF +SSAGIY P+DEPPH+EGD VK +AGHV VEKYI+E F +WAS
Sbjct: 9 RPVVDWAKAAGVGQF--VSSAGIYTPSDEPPHIEGDAVKENAGHVSVEKYIAEQFGSWAS 66
Query: 228 FRPQYMIGSGNNKDCEEWFFDRIVRKRP------VPIPGSGMQFTN 267
FRPQYMIGSGNNKDCEEWFFD + + P +P P + + F+N
Sbjct: 67 FRPQYMIGSGNNKDCEEWFFDSKITQIPPTKFSQIPYPHTKI-FSN 111
>gi|148239500|ref|YP_001224887.1| NAD dependent epimerase/dehydratase [Synechococcus sp. WH 7803]
gi|147848039|emb|CAK23590.1| NAD dependent epimerase/dehydratase [Synechococcus sp. WH 7803]
Length = 307
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 141/280 (50%), Gaps = 25/280 (8%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G L LL GH++T+ T G ++P + G ++ GD +
Sbjct: 7 GGTRFVGKPLVSRLLQQGHQLTLFTRG-------RQP--------LPEGVESCIGDRQDA 51
Query: 145 GNV--VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
+ + G F+VV+D++G+ L + V + + +FL++SSAG+Y +D P E
Sbjct: 52 AALEQLRGRRFEVVIDSSGRTLADSQKVIERTGAPS-HRFLYVSSAGVYAGSDTWPLDEQ 110
Query: 203 DVVKPD---AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP 259
+ P AG + E ++ + SFRP Y++G GN E WFFDRIV +RPVP+P
Sbjct: 111 SPLDPQSRHAGKAETEAWLMREGIPFTSFRPTYIVGPGNYNPVERWFFDRIVNQRPVPLP 170
Query: 260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP-- 317
G G T + HV DL+ + ++E +AA + ++N S R +T G+ A+A G
Sbjct: 171 GDGTTITQVGHVEDLAEAMARSLEV-DAACNRVYNCSSHRGITFRGLIAAAAKACGRELA 229
Query: 318 -VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW 356
+++ +DP A+KAFP R HF + + L W
Sbjct: 230 DLDLRSFDPSGLDPKARKAFPLRLSHFLTDVSRVERELAW 269
>gi|148242110|ref|YP_001227267.1| NAD dependent epimerase/dehydratase [Synechococcus sp. RCC307]
gi|147850420|emb|CAK27914.1| NAD dependent epimerase/dehydratase [Synechococcus sp. RCC307]
Length = 306
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 147/318 (46%), Gaps = 26/318 (8%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G L LL SGH+V + T G K+P + G + + GD ++
Sbjct: 7 GGTRFVGRPLVGHLLRSGHQVCLFTRG-------KQP--------LPEGVEHIRGDRSDA 51
Query: 145 GNVVG--GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
+ G FDV++D++G+ L + V + + +++SSAG+Y P E
Sbjct: 52 EGLAALKGRQFDVIVDSSGRTLTDTQSVVAITGAP-RHRLVYVSSAGVYADNARLPLDES 110
Query: 203 DVVKP---DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP 259
P AG + E ++ + SFRP Y+ G GN E WFFDRIV RPVPIP
Sbjct: 111 APTDPASRHAGKAETETWLQAEGIPFTSFRPTYIYGPGNYNPVENWFFDRIVHGRPVPIP 170
Query: 260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL--- 316
G G T + HV DL++ + +E +AA++ I+N VT G+ A+A G
Sbjct: 171 GDGTTITQLGHVEDLATAMARCLEV-DAAANRIYNCTDTHGVTFRGLVAAAARACGKDPE 229
Query: 317 PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI 376
VE+ +DP A+KAFP R HF + L W +L L++ + +
Sbjct: 230 QVELRSFDPSGLDPKARKAFPLRLTHFLTSVERLRKELAWTPQFDLEAGLRDSYSKD-HS 288
Query: 377 GRDKKAMQFEIDDKILES 394
R + F DD + ++
Sbjct: 289 QRPAADVDFSRDDSLFQA 306
>gi|88808654|ref|ZP_01124164.1| possible nucleotide sugar epimerase [Synechococcus sp. WH 7805]
gi|88787642|gb|EAR18799.1| possible nucleotide sugar epimerase [Synechococcus sp. WH 7805]
Length = 307
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 148/300 (49%), Gaps = 25/300 (8%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G L LL GH++T+ T G ++P + G ++ GD +
Sbjct: 7 GGTRFVGKPLVSRLLQQGHQLTLFTRG-------RQP--------LPDGVESCVGDRQDD 51
Query: 145 GNV--VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
+ + G F+VV+D++G+ L + V + + +FL++SSAG+Y ++ P E
Sbjct: 52 TALEQLRGRRFEVVIDSSGRTLADSQKVIERTGAPS-HRFLYVSSAGVYAGSESWPLDEQ 110
Query: 203 DVVKPD---AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP 259
+ P AG + E ++ + SFRP Y++G GN E WFFDRIV RP+P+P
Sbjct: 111 SPLDPQSRHAGKAETEAWLMREGIPFTSFRPTYIVGPGNYNPVERWFFDRIVHGRPIPLP 170
Query: 260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP-- 317
G G T + HV DL+ + ++E +AA + I+N S R +T G+ A+A G
Sbjct: 171 GDGTTITQVGHVEDLAEAMARSLEV-DAACNRIYNCSSHRGITFRGLIASAAEACGRECA 229
Query: 318 -VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI 376
+++ +DP A+KAFP R HF + A+ L W + + + F+ ++
Sbjct: 230 DLDLRSFDPSGLDPKARKAFPLRLSHFLTDVSRAERELAWMPRFDAATSMADSFQRDYQL 289
>gi|78779189|ref|YP_397301.1| mRNA binding protein [Prochlorococcus marinus str. MIT 9312]
gi|78712688|gb|ABB49865.1| mRNA binding protein-like protein [Prochlorococcus marinus str. MIT
9312]
Length = 306
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 159/326 (48%), Gaps = 33/326 (10%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+L++ GG +G L +LL H++ I T G+ K P N
Sbjct: 2 KILVM----GGTRFVGKSLVGKLLNQSHDIDIFTRGN------KANPKNT---------N 42
Query: 136 TVWGDPAEVGNVVG--GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
+ GD + ++V +DVV D +G+ L+ + + + S K+++++SSAG+YK
Sbjct: 43 LIKGDRNNLESIVKLRNEKYDVVYDISGRELEQTKLLIENLADS-FKRYIYVSSAGVYKD 101
Query: 194 ADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRI 250
E P E D + D+ H V+ E ++ + SFRP Y+ G GN E WFF+R+
Sbjct: 102 NHELPLSEDDPIDQDSRHKGKVETENWLINQKIPFTSFRPTYIYGPGNYNKIENWFFERL 161
Query: 251 VRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC 310
+ +PIPG G T + HV DL+ ++ + N E + +NI+N ++ VT+ G+ C
Sbjct: 162 FSNKSIPIPGDGSLITQLGHVSDLTDVMIRCI-NYEKSKNNIYNCSGEKGVTIKGLIYFC 220
Query: 311 AQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLK 367
A+ GL + + +D + ++K FP R H+ + K L W +L LK
Sbjct: 221 AKVLGLNQNEISLRTFDYQKLDPKSRKGFPIRLNHYQTDISKIKSDLDWEPNFDLLNGLK 280
Query: 368 ERFEEYVKIGRDKKAMQFEID-DKIL 392
+ F VK KK +F+ + DKIL
Sbjct: 281 DSF---VKDFNYKKGEEFDENLDKIL 303
>gi|397632209|gb|EJK70458.1| hypothetical protein THAOC_08181, partial [Thalassiosira oceanica]
Length = 255
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/229 (36%), Positives = 125/229 (54%), Gaps = 11/229 (4%)
Query: 168 RP-VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA 226
RP +A + + K ++SSAG+Y P DE P E VK AG V+ E++ E+ +
Sbjct: 28 RPLIAQISGARNSKLLCYVSSAGVYLPVDEFPMPESTPVKETAGQVEYERHALESGIPFC 87
Query: 227 SFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
SFRPQY+ G +NK D +W+FDRIV+ P+PIP G Q ++ + D++S+L + +
Sbjct: 88 SFRPQYIYGEKSNKWDYIDWYFDRIVKGAPLPIPSPGSQKVSLTNSVDVASLLASVLNDE 147
Query: 286 EAASSNI-FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFY 344
+AA+ + FN + V+ D +A +CA+AAGL +I HY+P+ K FPFR FY
Sbjct: 148 KAAAEQVYFNCGTSNLVSYDEVASMCAEAAGLSAKIEHYNPEL----GKAKFPFRLTDFY 203
Query: 345 AEPRAAKDILGWRS-TTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
P A L W L +DL +E Y K + +DD++L
Sbjct: 204 VAPDMATSKLKWEGPKCTLKDDLGWYYESY---KARSKTVDLSVDDEVL 249
>gi|116074757|ref|ZP_01472018.1| Possible nucleotide sugar epimerase [Synechococcus sp. RS9916]
gi|116067979|gb|EAU73732.1| Possible nucleotide sugar epimerase [Synechococcus sp. RS9916]
Length = 335
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 151/316 (47%), Gaps = 30/316 (9%)
Query: 69 ASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE 128
AS+ K+L++ GG +G L L GH +T+ F R +
Sbjct: 23 ASSDALMKILVM----GGTRFVGKPLVASLQEQGHALTL---------------FTRGRQ 63
Query: 129 IVSAGGKTVWGDPAEVGNV--VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
AG V GD ++ + G FDV++D++G+ L + V + +FL++S
Sbjct: 64 PAPAGVDHVVGDRGNPNDLEQLSGHHFDVIVDSSGRTLADSQAVLAITGAPS-HRFLYVS 122
Query: 187 SAGIYKPADEPPHVEGDVVKP---DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE 243
SAG+Y +D+ P E V P AG + E ++ + + SFRP Y++G GN E
Sbjct: 123 SAGVYAGSDQWPLDEDAAVDPASRHAGKAETEAWLLKEGIPFTSFRPTYIVGPGNYNPVE 182
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
WFFDR+ PVP+PG G T + HV DL+ + A+ +AA++ I+N S + +T
Sbjct: 183 RWFFDRVFHGLPVPMPGDGSTITQLGHVDDLADAMVRALAV-DAAANRIYNCSSRKGITF 241
Query: 304 DGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
G+ K A A G V++ H+DP A+KAFP R HF + A+ L W
Sbjct: 242 AGVVKAAALACGKDPEAVDVRHFDPSGLDPKARKAFPLRLSHFLTDVSRAERELAWSPRY 301
Query: 361 NLPEDLKERFE-EYVK 375
+ K F+ +Y K
Sbjct: 302 DAITAFKHNFDLDYSK 317
>gi|87124367|ref|ZP_01080216.1| possible mRNA-binding protein [Synechococcus sp. RS9917]
gi|86167939|gb|EAQ69197.1| possible mRNA-binding protein [Synechococcus sp. RS9917]
Length = 307
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 137/282 (48%), Gaps = 29/282 (10%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G L LL GH +T+ T G + + G + GD +
Sbjct: 7 GGTRFVGRPLVAALLAQGHALTLFTRGRQG---------------LPDGVEHCCGDRTKA 51
Query: 145 GNV--VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
++ + G F+V++D++G+ LD R V D +FL++SSAG+Y +++ P E
Sbjct: 52 ADLQQLQGRRFEVIIDSSGRTLDDSRLVLDHTGRPS-HRFLYVSSAGVYAASEQWPLDED 110
Query: 203 DVVKP---DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP 259
+ P AG E ++ + SFRP Y++G GN E WFF RI PVP+P
Sbjct: 111 SALDPASRHAGKAHTEAWLQAEGIPFTSFRPTYIVGPGNYNPIERWFFARIHHGLPVPVP 170
Query: 260 GSGMQFTNIAHVRDLSSML--TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-- 315
G G T + HV DL+ + +LAV +AA++ I+N S R +T +G+ A AAG
Sbjct: 171 GDGTTITQVGHVEDLAEAMVRSLAV---DAATNRIYNCSSRRGITFNGLVTAAALAAGKE 227
Query: 316 -LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW 356
+++ +DP A+KAFP R HF + + L W
Sbjct: 228 PQSIDVRFFDPSGLDPKARKAFPLRISHFLTDITRVERELAW 269
>gi|123968394|ref|YP_001009252.1| mRNA binding protein [Prochlorococcus marinus str. AS9601]
gi|123198504|gb|ABM70145.1| possible mRNA binding protein [Prochlorococcus marinus str. AS9601]
Length = 306
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 163/325 (50%), Gaps = 31/325 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGG 134
K+L++ GG +G L +LL +++ I T G++ N +K +R N +
Sbjct: 2 KILVM----GGTRFVGKSLVGKLLSKNYDIDIFTRGNKSNPEKTNLIKGDRNNSV----- 52
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
D ++ N +DVV D +G+ L+ + + + +S ++++++SSAG+YK
Sbjct: 53 -----DILKLRNK----KYDVVYDISGRELEQTKLLIENLDNS-FQRYIYVSSAGVYKDN 102
Query: 195 DEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV 251
E P E D + PD+ H + E ++ + + SFRP Y+ G GN E WFF+R+
Sbjct: 103 SELPLSEVDPIDPDSRHKGKFETENWLKKQKIPFTSFRPTYIYGPGNYNKIENWFFERLF 162
Query: 252 RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 311
K+ +PIPG G T + HV DL+ ++ + N E + +NI+N ++ VT+ G+ CA
Sbjct: 163 TKKSIPIPGDGSLITQLGHVSDLTDVMIRCI-NFENSKNNIYNCSGEKGVTIKGLIYFCA 221
Query: 312 QAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 368
GL + + +D + ++K FP R H+ + K L W T +L LK+
Sbjct: 222 NVLGLKQNEISLRTFDYQKLDPKSRKGFPIRLNHYQTDISKIKRDLEWAPTFDLLNGLKD 281
Query: 369 RFEEYVKIGRDKKAMQF-EIDDKIL 392
F V +KK+ +F E D IL
Sbjct: 282 SF---VNDFNNKKSEEFDENSDNIL 303
>gi|78213396|ref|YP_382175.1| nucleotide sugar epimerase [Synechococcus sp. CC9605]
gi|78197855|gb|ABB35620.1| possible nucleotide sugar epimerase [Synechococcus sp. CC9605]
Length = 301
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 147/295 (49%), Gaps = 27/295 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA-- 142
GG +G L L GH +T+ T G K P V G + + GD +
Sbjct: 2 GGTRFVGRPLVARLQAQGHALTLFTRG-------KNP--------VPTGVEHLCGDRSSD 46
Query: 143 EVGNVVGGVTFDVVLDNNG-KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE 201
E + + G +FDV++D++G K D+ R VA S +F+++SSAG+Y +++ P E
Sbjct: 47 EGLSALQGRSFDVIVDSSGRKQEDSSRVVAITGGPS--HRFVYVSSAGVYADSEQWPLDE 104
Query: 202 GDVVKPD---AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPI 258
P AG + E ++ + + SFRP Y+ G GN E WFFDRIV RP+P+
Sbjct: 105 SSPTNPQSRHAGKAETEAWLRKEGIPFTSFRPTYIYGPGNYNPVERWFFDRIVHSRPIPL 164
Query: 259 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP- 317
PG G T + HV DL+ + +E +AA++ I+N + ++ G+ + A A G
Sbjct: 165 PGDGSTITQLGHVEDLAEAMARCIEV-DAAANRIYNCSGKQGISFRGLIRAAAVACGRDP 223
Query: 318 --VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 370
+E+ ++P A+KAFP R HF + + L W+ + +L + L + +
Sbjct: 224 DGLELRSFNPSDLDPKARKAFPLRLNHFLTDITRVERELAWQPSFDLAKGLADSY 278
>gi|260435772|ref|ZP_05789742.1| possible nucleotide sugar epimerase [Synechococcus sp. WH 8109]
gi|260413646|gb|EEX06942.1| possible nucleotide sugar epimerase [Synechococcus sp. WH 8109]
Length = 306
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 151/302 (50%), Gaps = 31/302 (10%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+L++ GG +G L L GH +T+ T G K P V AG +
Sbjct: 2 KILVM----GGTRFVGRPLVARLQAQGHALTLFTRG-------KNP--------VPAGVE 42
Query: 136 TVWGDPA--EVGNVVGGVTFDVVLDNNG-KNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
+ GD + E + + G +FDV++D++G K D+ R VA S +F+++SSAG+Y
Sbjct: 43 HLCGDRSSDEGLSALQGRSFDVIVDSSGRKQEDSSRVVA--ITGSPSHRFVYVSSAGVYA 100
Query: 193 PADEPPHVEGDVVKPD---AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
++ P E P AG E ++ + + SFRP Y+ G GN E WFFDR
Sbjct: 101 DSELWPMDESSPTDPQSRHAGKADTEAWLRKEGIPFTSFRPTYIYGPGNYNPVERWFFDR 160
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
IV RP+P+PG G T + HV DL+ + ++ +AA++ I+N + ++ G+ +
Sbjct: 161 IVHNRPIPLPGDGSTITQLGHVEDLAEAMARCIDV-DAAANRIYNCSGKQGISFRGLIRA 219
Query: 310 CAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDL 366
A A G +E+ ++P+ A+KAFP R HF + + L W+ + +L + L
Sbjct: 220 AAVACGRDPDGLELRSFNPRDLDPKARKAFPLRLNHFLTDITRVERELAWQPSFDLAKGL 279
Query: 367 KE 368
+
Sbjct: 280 AD 281
>gi|126696196|ref|YP_001091082.1| mRNA binding protein [Prochlorococcus marinus str. MIT 9301]
gi|126543239|gb|ABO17481.1| possible mRNA binding protein [Prochlorococcus marinus str. MIT
9301]
Length = 306
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 160/327 (48%), Gaps = 35/327 (10%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS---DKMKKPPFNRFNEIVSA 132
K+L++ GG +G L +LL H++ I T G++++ + K N +IV
Sbjct: 2 KILVM----GGTRFVGKSLVGKLLSKNHDIDIFTRGNKSNPEKTNLIKGDRNNSEDIVKL 57
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
K +DVV D +G+ L+ + + +S ++++++SSAG+YK
Sbjct: 58 RNKK----------------YDVVYDISGRELEQTKLLIGNLDNS-FQRYIYVSSAGVYK 100
Query: 193 PADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
E P E D + P++ H + E ++ + SFRP Y+ G GN E WFF+R
Sbjct: 101 DNFELPLSEEDPIDPNSRHKGKFETENWLINQKIPFTSFRPTYIYGPGNYNKIENWFFER 160
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
+ K+ +PIPG G T + HV DL+ ++ + N E + +NI+N ++ VT+ G+
Sbjct: 161 LFTKKSIPIPGDGSLITQLGHVSDLTDVMIRCM-NFENSKNNIYNCSGEKGVTIKGLIYF 219
Query: 310 CAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDL 366
CA GL + + +D + ++K FP R H+ + K L W T +L L
Sbjct: 220 CANVLGLNKNEISLRTFDYQKLDPKSRKGFPIRLNHYQTDISKIKRDLEWAPTFDLLNGL 279
Query: 367 KERFEEYVKIGRDKKAMQF-EIDDKIL 392
++ F VK +KK+ +F E D IL
Sbjct: 280 RDSF---VKDFNNKKSEEFDENSDHIL 303
>gi|157413227|ref|YP_001484093.1| putative mRNA binding protein [Prochlorococcus marinus str. MIT
9215]
gi|157387802|gb|ABV50507.1| possible mRNA binding protein [Prochlorococcus marinus str. MIT
9215]
Length = 309
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 158/318 (49%), Gaps = 30/318 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGG 134
K+L++ GG +G L +LL +++ I T G++ N +K + G
Sbjct: 2 KILVM----GGTRFVGKSLVGKLLSKNYDIDIFTRGNKSNPEKTN----------LIKGD 47
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+ D ++ N +DVV D +G+ L+ + + + +S ++++++SSAG+YK
Sbjct: 48 RNNSEDIVKLRNE----KYDVVFDISGRELEQTKLLIENLDNS-FQRYIYVSSAGVYKDN 102
Query: 195 DEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV 251
E P E D + P++ H + E ++ + SFRP Y+ G GN E WFF+R+
Sbjct: 103 CELPLSEVDPIDPESRHKGKFETENWLKNQKIPFTSFRPTYIYGPGNYNKIENWFFERLF 162
Query: 252 RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 311
K+ +PIPG G T + HV DL+ ++ + N E + +NI+N ++ VT+ G+ CA
Sbjct: 163 TKKSIPIPGDGSLITQLGHVSDLTDVMIRCI-NFENSKNNIYNCSGEKGVTIKGLIYFCA 221
Query: 312 QAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 368
GL + + +D + ++K FP R H+ + K L W T +L LK+
Sbjct: 222 NVLGLNQNEISLRTFDYQKLDPKSRKGFPIRLNHYQTDISKIKRDLQWAPTFDLLNGLKD 281
Query: 369 RFEEYVKIGRDKKAMQFE 386
F V +KK+ +F+
Sbjct: 282 SF---VNDFNNKKSEEFD 296
>gi|254526226|ref|ZP_05138278.1| NAD dependent epimerase/dehydratase [Prochlorococcus marinus str.
MIT 9202]
gi|221537650|gb|EEE40103.1| NAD dependent epimerase/dehydratase [Prochlorococcus marinus str.
MIT 9202]
Length = 306
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 161/325 (49%), Gaps = 31/325 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGG 134
K+L++ GG +G L +LL +++ I T G++ N +K + G
Sbjct: 2 KILVM----GGTRFVGKSLVGKLLIKNYDIDIFTRGNKSNPEKTN----------LIKGD 47
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+ D ++ N +DVV D +G+ L+ + + + +S ++++++SSAG+YK
Sbjct: 48 RNNSEDIVKLKNE----KYDVVFDISGRELEQTKLLIENLDNS-FQRYIYVSSAGVYKDN 102
Query: 195 DEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV 251
E P E D + P++ H + E ++ + SFRP Y+ G GN E WFF+R+
Sbjct: 103 CELPLSEVDPIDPESRHKGKFETENWLKNQKIPFTSFRPTYIYGPGNYNKIENWFFERLF 162
Query: 252 RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 311
K+ +PIPG G T + HV DL+ ++ + N E + +NI+N ++ VT+ G+ CA
Sbjct: 163 TKKSIPIPGDGSLITQLGHVSDLTDVMIRCI-NFENSKNNIYNCSGEKGVTIKGLIYFCA 221
Query: 312 QAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 368
GL + + +D + ++K FP R H+ + K L W T +L LK+
Sbjct: 222 NVLGLNQNQISLRTFDYQKLDPKSRKGFPIRLNHYQTDISKIKRDLEWAPTFDLLNGLKD 281
Query: 369 RFEEYVKIGRDKKAMQF-EIDDKIL 392
F V +KK+ +F E D IL
Sbjct: 282 SF---VNDFNNKKSEEFDENSDNIL 303
>gi|33865306|ref|NP_896865.1| nucleotide sugar epimerase [Synechococcus sp. WH 8102]
gi|33632475|emb|CAE07287.1| Possible nucleotide sugar epimerase [Synechococcus sp. WH 8102]
Length = 301
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 142/300 (47%), Gaps = 26/300 (8%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--PA 142
GG +G L L GH +T+ F R + G + + GD +
Sbjct: 2 GGTRFVGKPLVARLQAQGHALTL---------------FTRGRNALPEGVEHLSGDRSSS 46
Query: 143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
E + + G FDV++D++G+ L+ R V + + +F+++SSAG+Y ++ P E
Sbjct: 47 EGLSPLEGRQFDVIVDSSGRKLEDSRRVVEITGAPS-HRFVYVSSAGVYAGSELWPLDET 105
Query: 203 DVVKPD---AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP 259
P+ AG E ++ + SFRP Y+ G GN E WFFDRI RPVP+P
Sbjct: 106 AATDPNSRHAGKADTEAWLRAEGIPFTSFRPTYIYGPGNYNPVERWFFDRITHDRPVPLP 165
Query: 260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL--- 316
G G T + HV DL+ + ++ EAA++ I+N + +T G + A A
Sbjct: 166 GDGSTITQLGHVDDLAEAMARCIDV-EAAANRIYNCSGKQGITFRGFIQAAAVACAKDPD 224
Query: 317 PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVK 375
VE+ +DP A+KAFP R HF + + L W+ +L + L + F+ +Y K
Sbjct: 225 AVELRPFDPSGLDPKARKAFPLRLNHFLTDITRVERELAWQPRFDLAKGLADSFQNDYAK 284
>gi|33861354|ref|NP_892915.1| mRNA binding protein [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33633931|emb|CAE19256.1| possible mRNA binding protein [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 306
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 150/314 (47%), Gaps = 29/314 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+L++ GG +G L +LL H++ I T G+ K P N
Sbjct: 2 KILVM----GGTRFVGKSLVSKLLNQNHDIDIFTRGN------KTNPDNT---------N 42
Query: 136 TVWGDPAEVGNVVG--GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
+ GD ++ ++ +DV+ D +G+ ++ + + + S + ++++SSAG+YK
Sbjct: 43 LIKGDRNDIECILKLKNKKYDVIFDISGREVEQTKLLIENLDDSFFR-YIYVSSAGVYKD 101
Query: 194 ADEPPHVEG---DVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRI 250
E P E D G + E ++ E + SFRP Y+ G GN E WFF+R+
Sbjct: 102 NYELPLSEDSPLDTNSRHKGKFETENWLVEKKIPFTSFRPTYIYGPGNYNKIENWFFERL 161
Query: 251 VRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC 310
+ +PIP G T + HV DLS ++ ++ E + ++I+N +R VT+ G+ LC
Sbjct: 162 FHLKSIPIPADGSLITQLGHVSDLSDVMIKCLD-FEKSKNSIYNCSGERGVTIKGLIYLC 220
Query: 311 AQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLK 367
A+ GL + + +D + ++K FP R H+ + K+ L W+ +L LK
Sbjct: 221 AEVCGLNKTDIYLNKFDFEKLDPKSRKGFPIRLNHYQTDISKIKNDLNWKPKFDLLSGLK 280
Query: 368 ERFEEYVKIGRDKK 381
+ F + + +D K
Sbjct: 281 DSFIKDYQFKKDNK 294
>gi|159903505|ref|YP_001550849.1| mRNA binding protein [Prochlorococcus marinus str. MIT 9211]
gi|159888681|gb|ABX08895.1| possible mRNA binding protein [Prochlorococcus marinus str. MIT
9211]
Length = 323
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 154/320 (48%), Gaps = 32/320 (10%)
Query: 58 RRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK 117
R +S+ FT K+L++ GG +G + LL HE+T+ T G+
Sbjct: 8 RHASIDMFT----CVNALKILVM----GGTRFVGKAIVDHLLIDKHEITLFTRGNN---- 55
Query: 118 MKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS 177
P+ + KT D E G+ FDV++D +G+NL V AK+
Sbjct: 56 ----PYPNGVRHIKGDRKTSDIDKLE------GLKFDVIIDCSGRNLSETEDVI--AKTG 103
Query: 178 GVK-QFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYM 233
+ +F++ISSAGIY ++ P E + P++ H+ + E ++ + FRP Y+
Sbjct: 104 YPEHRFIYISSAGIYSYSESLPVEETSPIDPNSRHIGKAETESWLKNEGIPFTVFRPTYI 163
Query: 234 IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
G N E+WFFDRI + +P+P GM T + HV DL+ + ++++ + A + I+
Sbjct: 164 YGPSNYNPIEKWFFDRITYSQIIPLPDQGMGLTQLGHVADLARAIKVSLDY-KIAENKIY 222
Query: 294 NLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAA 350
N S +A+T G+ A+A+G + + ++ A+KAFP R HF+ +
Sbjct: 223 NCSSAKAITFKGLVYAAAKASGSNKDELRLCSFNTSKLDPKARKAFPLRLPHFFTDTSLI 282
Query: 351 KDILGWRSTTNLPEDLKERF 370
+ L W+ +L L++ +
Sbjct: 283 QRELDWKPIYSLERGLEDSY 302
>gi|123966019|ref|YP_001011100.1| mRNA binding protein [Prochlorococcus marinus str. MIT 9515]
gi|123200385|gb|ABM71993.1| possible mRNA binding protein [Prochlorococcus marinus str. MIT
9515]
Length = 306
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 149/307 (48%), Gaps = 37/307 (12%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD----ENSDKMKKPPFNRFNEIVS 131
K+L++ GG +G L +LL +++ I T G+ EN++ +K
Sbjct: 2 KILVM----GGTRFVGKSLVGKLLNHKYDIDIFTRGNKSNPENTNLIK------------ 45
Query: 132 AGGKTVWGDPAEVGNVVG--GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
GD + +++ +DV+ D +G+ L+ + + + S +++++SSAG
Sbjct: 46 -------GDRNNIESLLKLKNKKYDVIYDISGRELEQTKLLMEILADS-FHRYIYVSSAG 97
Query: 190 IYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWF 246
+YK E P E + P++ H + E ++ + + SFRP Y+ G GN E WF
Sbjct: 98 VYKDNYELPLSENAPLDPNSRHKGKFETENWLVKQKIPFTSFRPTYIYGPGNYNKIENWF 157
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
F+R+ + +PIP G T + HV DLS ++ ++ E + +NI+N ++ VT+ G+
Sbjct: 158 FERLFHLKTIPIPADGSLITQLGHVSDLSDVMIRCLD-FEKSKNNIYNCSGNKGVTIKGL 216
Query: 307 AKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLP 363
+CA+ GL + + +D + ++K FP R H+ + K+ L W +L
Sbjct: 217 IYMCAEVCGLNKKDIFLNKFDFQKLDTKSRKNFPIRLNHYQTDISKIKNDLNWEPKFDLL 276
Query: 364 EDLKERF 370
LK+ F
Sbjct: 277 RGLKDSF 283
>gi|72382045|ref|YP_291400.1| mRNA binding protein [Prochlorococcus marinus str. NATL2A]
gi|72001895|gb|AAZ57697.1| possible mRNA-binding protein [Prochlorococcus marinus str. NATL2A]
Length = 307
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 141/299 (47%), Gaps = 33/299 (11%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGD----ENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
GG +G L LL GHE+ + T G+ EN +K +R N+
Sbjct: 9 GGTRFVGKSLVSNLLSKGHEIFVFTRGNLPVPENITHLKG---DRSND------------ 53
Query: 141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGV--KQFLFISSAGIYKPADEPP 198
E + +FD+++D++G+ L+ + + K SG+ +F++ISSAG+Y P
Sbjct: 54 --EDLKKLSDHSFDLIVDSSGRKLEDTQRLL---KFSGLPSYRFIYISSAGVYDNTQLFP 108
Query: 199 HVEG---DVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRP 255
E D+ G + E ++ + SFRP Y+ G GN E+WFFDRI R
Sbjct: 109 VGEDSPIDLASRHIGKAKTESWLKAEGIPFTSFRPTYIYGPGNYNPIEKWFFDRITNGRS 168
Query: 256 VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG 315
+P+P G T + HV DL+ + ++E + A++ I+N +AVT G+ + A G
Sbjct: 169 IPVPLDGQAITQLGHVSDLAEAIAKSLET-DKANNQIYNCSGRKAVTFKGLIETAILATG 227
Query: 316 LPV---EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 371
V ++ +DP A+K FP R ++F+ + + L W +L L + ++
Sbjct: 228 NKVTDFDLRSFDPSKLDPKARKLFPLRLINFFTDTSKIEKDLSWEPKFDLLNGLIDSYK 286
>gi|323451761|gb|EGB07637.1| hypothetical protein AURANDRAFT_27287 [Aureococcus anophagefferens]
Length = 366
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 151/311 (48%), Gaps = 19/311 (6%)
Query: 78 LIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV 137
+IV GGH IG++LAK L +VTI V D ++ K + PF ++E+ +
Sbjct: 40 VIVQNKGGGHGEIGYHLAKALAAKDLDVTI--VQDASATK-EALPFKLYDELSATVAWCD 96
Query: 138 WGDPAEV--GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD A V V G+T V DN K+ P+ AKSS + F+SSAG+Y A
Sbjct: 97 MGDAAAVEKACAVDGLTH--VYDNFAKSPADAAPMMAAAKSSDA-FYAFVSSAGMYT-AK 152
Query: 196 EPPHVEGDVVKPDAGHVQVEKYI-SENFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRK 253
E V P G +VE + +E W +FRPQY+ G NK D +WF +R R
Sbjct: 153 GILKEEKKVKDPPTGQREVELALEAELAGKWCAFRPQYIYGPYTNKRDYLDWFLNRAARD 212
Query: 254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 313
P+ +P Q ++ H D+++++ V AA+ IFN +++ + D + A+A
Sbjct: 213 IPMAVPADAQQPVSLTHCEDVAALMASVVGKEGAAADQIFNCGTNKMCSYDDVCIAAAKA 272
Query: 314 AGLPVEIVHYDPKAAGIDAKKAFPFR--NMHFYAEPRAAKDILGW-RSTTNLPEDLKERF 370
G +V P D K +FPFR F R A D+L W +T ++ DL +
Sbjct: 273 LGKSEALVVALPP----DTKSSFPFRPNAEGFAVRVRKAMDVLEWPGATHDVLADLAGFY 328
Query: 371 -EEYVKIGRDK 380
E+++ +G DK
Sbjct: 329 TEDFLALGLDK 339
>gi|124025544|ref|YP_001014660.1| mRNA binding protein [Prochlorococcus marinus str. NATL1A]
gi|123960612|gb|ABM75395.1| possible mRNA binding protein [Prochlorococcus marinus str. NATL1A]
Length = 307
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 142/300 (47%), Gaps = 35/300 (11%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGD----ENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
GG +G L LL GHE+ + T G+ EN +K +R N+
Sbjct: 9 GGTRFVGKALVSNLLSKGHEIFVFTRGNLPVPENITHLKG---DRSND------------ 53
Query: 141 PAEVGNVVGGVTFDVVLDNNGKNL-DAVRPVADWAKSSGV--KQFLFISSAGIYKPADEP 197
E + +FD+++D++G+ L D R + K SG+ +F++ISSAG+Y
Sbjct: 54 --EDLKKLSDHSFDLIVDSSGRKLADTQRLL----KFSGLPSYRFIYISSAGVYDNTQLF 107
Query: 198 PHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKR 254
P E + ++ H+ + E ++ + SFRP Y+ G GN E+WFFDRI R
Sbjct: 108 PVGEDGPIDLESRHIGKAKTESWLKAEGIPFTSFRPTYIYGPGNYNPIEKWFFDRITNGR 167
Query: 255 PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA 314
+P+P G T + HV DL+ + ++E + A++ I+N +AVT G+ A
Sbjct: 168 SIPVPLDGQAITQLGHVSDLAEAIAKSLET-DKANNQIYNCSGRKAVTFKGLIDTAILAT 226
Query: 315 GLPV---EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 371
G V ++ +DP A+K FP R ++F+ + + L W +L L + ++
Sbjct: 227 GNKVTDFDLRSFDPSKLDPKARKLFPLRLINFFTDTSKIEKDLSWEPKFDLLNGLIDSYK 286
>gi|294782079|ref|ZP_06747405.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 1_1_41FAA]
gi|294480720|gb|EFG28495.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 1_1_41FAA]
Length = 310
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 147/309 (47%), Gaps = 32/309 (10%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+L++ GG+ +G +AK+ L ++V ++ G ++K N + A
Sbjct: 2 KKILVM----GGNQFVGKEVAKKFLEKNYKVYVLNRG------IRKNLDNAI--FLKADR 49
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K + +E+ N++ + DV++D + + V + K+ KQ++ ISSA IY
Sbjct: 50 KNI----SEMKNILKNIEVDVIIDISAYTEEQVEILQRVMKNK-FKQYILISSASIYTDI 104
Query: 195 DEPPHVEGDVV--KPDAGHVQVEKYISE----------NFSNWASFRPQYMIGSGNNKDC 242
E P E D P G KY++E NF + FRP Y+ G GNN D
Sbjct: 105 TESPAKEEDPTGENPAWGDYAKNKYLAEIKTIENSRLYNFK-YTIFRPFYIYGIGNNLDR 163
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
E +FF RI P+ IP G ++ DL+S + LAVEN + +FN+ D V
Sbjct: 164 ENYFFSRIKYNLPIYIPNKGNNIVQFGYIEDLASAIELAVENSDFYGQ-VFNISGDEYVA 222
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNL 362
+ A++C + I H D + I A+ FPFR ++ + + ++ G+R+ +L
Sbjct: 223 ITEFAEICGKIMNKKSIIKHIDTEEKNIKARDWFPFREVNLFGDISKLENT-GFRNKYSL 281
Query: 363 PEDLKERFE 371
+ L++ ++
Sbjct: 282 IKGLEKTYK 290
>gi|340753003|ref|ZP_08689796.1| isoflavone reductase [Fusobacterium sp. 2_1_31]
gi|422317135|ref|ZP_16398500.1| hypothetical protein FPOG_00931 [Fusobacterium periodonticum D10]
gi|229422791|gb|EEO37838.1| isoflavone reductase [Fusobacterium sp. 2_1_31]
gi|404590189|gb|EKA92658.1| hypothetical protein FPOG_00931 [Fusobacterium periodonticum D10]
Length = 310
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 147/309 (47%), Gaps = 32/309 (10%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+L++ GG+ +G +AK+LL ++V ++ G ++K N + A
Sbjct: 2 KKILVM----GGNQFVGKEVAKKLLEKNYKVYVLNRG------IRKNLDNVI--FLKADR 49
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K + +E+ N++ + DV++D + + V + K+ KQ++ ISSA +Y
Sbjct: 50 KNI----SEMKNILKNIEVDVIIDISAYTEEQVEILQRVMKNK-FKQYILISSASVYTDI 104
Query: 195 DEPPHVEGDVV--KPDAGHVQVEKYISE----------NFSNWASFRPQYMIGSGNNKDC 242
E P E D P KY++E NF + FRP Y+ G GNN D
Sbjct: 105 TESPAKEDDPTGENPAWSDYAKNKYLAEMRTIENSRLYNFK-YTIFRPFYIYGIGNNLDR 163
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
E +FF RI P+ IP G ++ DL+S + LAVEN + +FN+ D V
Sbjct: 164 ENYFFSRIKYNLPIYIPNKGNNIVQFGYIEDLASAIELAVENSDFYGQ-VFNISGDEYVA 222
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNL 362
+ A++C + I H D + I A+ FPFR ++ + + ++ G+R+ +L
Sbjct: 223 ITEFAEICGKIMNKKSIIKHIDTEEKNIKARDWFPFREVNLFGDISKLENT-GFRNKYSL 281
Query: 363 PEDLKERFE 371
+ L++ ++
Sbjct: 282 IKGLEKTYK 290
>gi|358467521|ref|ZP_09177227.1| hypothetical protein HMPREF9093_01706 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357067805|gb|EHI77891.1| hypothetical protein HMPREF9093_01706 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 310
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 147/309 (47%), Gaps = 32/309 (10%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+L++ GG+ +G +AK+LL ++V ++ G ++K N + A
Sbjct: 2 KKILVM----GGNQFVGKEVAKKLLEKNYKVYVLNRG------IRKNLDNAI--FLKADR 49
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K + +E+ N++ + DV++D + + V + K+ KQ++ ISSA +Y
Sbjct: 50 KNI----SEMRNILKNIEVDVIIDISAYTEEQVEILQRIMKNK-FKQYILISSASVYTDI 104
Query: 195 DEPPHVEGDVVKPDA--GHVQVEKYISE----------NFSNWASFRPQYMIGSGNNKDC 242
E P E + G KY++E NF + FRP Y+ G GNN D
Sbjct: 105 TESPAKEDSPTGENLAWGDYAKNKYLAEIRTLKNSRLYNFK-YTIFRPFYIYGIGNNLDR 163
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
E +FF RI P+ IP G ++ DL+S + LAVEN + IFN+ D +
Sbjct: 164 ENYFFSRIKYNLPIYIPNKGNNIVQFGYIEDLASAIELAVENSDFYGQ-IFNISGDEYIA 222
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNL 362
+ A++C + I + + + I A+ FPFR ++ + + ++ G+R+ +L
Sbjct: 223 VTEFAEICGKIMNKKSIIKYINTEEKKIKARDWFPFREVNLFGDISKLENT-GFRNKYSL 281
Query: 363 PEDLKERFE 371
+ L++ ++
Sbjct: 282 IKGLEKTYK 290
>gi|338746092|emb|CCC15095.1| putative chloroplast mRNA binding protein csp41 [Lepidodinium
chlorophorum]
Length = 223
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 114/229 (49%), Gaps = 18/229 (7%)
Query: 72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS 131
A+K LI+ GGH IG++LA L G +VT++ +++ K P++ + E ++
Sbjct: 1 ADKGHALILQNKGGGHGEIGYHLALALEAKGLKVTML---QDSAAKKNMVPYSLYAEKLT 57
Query: 132 AGGKTVWGDPAE--------VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQF 182
+W DP + + G + DNN K+ + P+ A+ S K +
Sbjct: 58 -NTNIIWLDPKQGVSYLHQIASALKDGPPITHIFDNNSKDPKEIAPLLALARGSPRFKLY 116
Query: 183 LFISSAGIYKPADEPPHVE-GDVVKPDAGHVQVEKYISENF-SNWASFRPQYMIGSGNNK 240
FISSAG+Y + VE GDV P G +VE + +N WASFRPQY+ G NK
Sbjct: 117 SFISSAGMYTAKGQ--LVENGDVKDPPTGQRKVELSLEKNLPGRWASFRPQYIYGPYTNK 174
Query: 241 DCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
+WF +R + P+ +PG Q N+AH D++ +L+ + +AA
Sbjct: 175 RGYLDWFLERAAQSLPMGVPGDASQPVNLAHCEDVAELLSSVIGKEQAA 223
>gi|407474175|ref|YP_006788575.1| NAD-dependent epimerase/dehydratase family protein [Clostridium
acidurici 9a]
gi|407050683|gb|AFS78728.1| NAD-dependent epimerase/dehydratase family protein [Clostridium
acidurici 9a]
Length = 312
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 141/313 (45%), Gaps = 36/313 (11%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K VL++ GG + + +LAK L+G G+ V I+T G +K ++ F E +
Sbjct: 2 KSVLVM----GGTSFVSSFLAKHLIGQGYNVDILTRG------LKSIDYDGFREQLICDR 51
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K+ EV V+ G ++ V D + V + + +K+++F SS +Y+P+
Sbjct: 52 KS----KNEVQEVLEGRKYEFVFDISAYTKADVEILLTSIDKNELKKYVFCSSGAVYEPS 107
Query: 195 DEPPHVEGDVVKP--------DAGHVQVEKYISENFSN-----WASFRPQYMIGSGNNKD 241
D +K + G ++K +E+F + FRP Y+ G NN
Sbjct: 108 -------SDTIKESFKKGENSNWGKYGIDKKEAEDFIINSGIPYTIFRPPYIYGENNNLY 160
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
E +FFDRI+ + +PIP T H+ DL + + N +SSNI+N+ + +
Sbjct: 161 REIYFFDRIINNKEIPIPFGKDTKTQFIHINDLVRIFESVMYN--ESSSNIYNVTNPELI 218
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTN 361
+ D C + G + D ++++ FPFR++ + + ++ T +
Sbjct: 219 SWDYFIAKCGEVIGKTPIMKKIDVNQVKLESRSYFPFRDVTYVLDTEQLMKSKLYKPTIS 278
Query: 362 LPEDLKERFEEYV 374
L E LK +E Y+
Sbjct: 279 LEEGLKRAYEWYI 291
>gi|302873783|ref|YP_003842416.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans
743B]
gi|307689977|ref|ZP_07632423.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans
743B]
gi|302576640|gb|ADL50652.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans
743B]
Length = 322
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 125/278 (44%), Gaps = 30/278 (10%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSA 132
KK+VL++ GG IG + LL + + + + G E++DK
Sbjct: 2 KKQVLLM----GGSYFIGKKIVDILLDNDYSIYTLNRGTREDNDKR------------VI 45
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
K D E+ N++ FD+V+D + N + D +KQFLFISS+ +Y
Sbjct: 46 NLKCDRNDAEEMKNILSKYVFDIVIDVSALNRLQAEILYDSLNKENLKQFLFISSSAVYD 105
Query: 193 PAD-EPPHVEGDVVKPD-------AGHVQVEKYISENF----SNWASFRPQYMIGSGNNK 240
+ P+ E +K + A ++ E ++ E+F +N RP Y+ G N
Sbjct: 106 VENFSIPYNEETPLKENKYWTAYGANKIEAESFLIESFQQTKTNLIIIRPPYVYGENNYA 165
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
E + F+ I RP+ IP SG + + DL++++ L + N + + +IFN+ + ++
Sbjct: 166 QRESFIFEHICSDRPIIIPNSGNTYLQFIYTTDLANII-LTLLNAKLDTISIFNVGNKKS 224
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 338
T+ + C AG I+ YD K + FPF
Sbjct: 225 FTIKEWIECCENVAGKKARIIEYDYKKYNRCVRDFFPF 262
>gi|19704634|ref|NP_604196.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|19714936|gb|AAL95495.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 309
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 147/311 (47%), Gaps = 37/311 (11%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAG 133
KK+LI+ GG+ +G +AK L + + ++ G +N + + +R N I
Sbjct: 2 KKILIM----GGNQFVGKEIAKNFLEKDYTIYVLNRGTRKNIEGVFFLKVDRDNLI---- 53
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
E+ N++ + D+++D + + V + K+ G KQ++ ISSA +Y
Sbjct: 54 ---------EMENILKDIEVDIIVDVSAYTEEQVDILHKVMKN-GFKQYILISSASVYNN 103
Query: 194 ADEPPHVEGDVVKPDA--GHVQVEKYISE-------NFSN--WASFRPQYMIGSGNNKDC 242
+ P EG + G KY++E N N + FRP Y+ G GNN D
Sbjct: 104 IECTPVNEGCQTGENLIWGDYAKNKYLAEKKTIENSNLYNFKYTIFRPFYIYGIGNNLDR 163
Query: 243 EEWFFDRIVRKRPVPIPGSG--MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
E +FF RI P+ IP +QF +V DL+ + ++EN + + IFN+ D
Sbjct: 164 ENYFFSRIKYNLPIFIPSKNNIIQF---GYVEDLALAIESSIENSDFYNQ-IFNISGDEY 219
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
VT+ A++C + I + + + I A+ FPFR ++ + ++ G+R+T
Sbjct: 220 VTMSEFAEICGKVMAKKAVIKYVNTEENKIKARDWFPFREVNLFGNISKLENT-GFRNTY 278
Query: 361 NLPEDLKERFE 371
+L + L++ ++
Sbjct: 279 SLIQGLEKTYK 289
>gi|218190586|gb|EEC73013.1| hypothetical protein OsI_06939 [Oryza sativa Indica Group]
Length = 812
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 43/53 (81%)
Query: 199 HVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV 251
H D VK +AGHV VEKYI+E F +WASFRPQYMIGSGNNKDCEEWFFD I
Sbjct: 12 HAMQDAVKENAGHVSVEKYIAEQFGSWASFRPQYMIGSGNNKDCEEWFFDTIC 64
>gi|262068102|ref|ZP_06027714.1| dTDP-glucose 4,6-dehydratase [Fusobacterium periodonticum ATCC
33693]
gi|291378188|gb|EFE85706.1| dTDP-glucose 4,6-dehydratase [Fusobacterium periodonticum ATCC
33693]
Length = 249
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 121/265 (45%), Gaps = 33/265 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG-DENSDKMKKPPFNRFNEIVSAG 133
KK+L++ GG+ +G +AK+LL ++V ++ G N D++ + A
Sbjct: 2 KKILVM----GGNQFVGKEVAKKLLEKNYKVYVLNRGIRRNLDEVI---------FLKAD 48
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
K + E+ N++ + DV++D + + V + K+ KQ++ ISSA +Y
Sbjct: 49 RKNI----PEMKNILKNIEVDVIIDISAYTEEQVEILQRIMKNK-FKQYILISSASVYTD 103
Query: 194 ADEPPHVEGDVVKPDA--GHVQVEKYISE----------NFSNWASFRPQYMIGSGNNKD 241
E P E + G KY++E NF + FRP Y+ G GNN D
Sbjct: 104 ITESPAKEDSPTGENLAWGDYAKNKYLAEKRTIENSELYNFK-YTIFRPFYIYGVGNNLD 162
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
E +FF RI P+ IP G ++ DL+S + LAVEN + IFN+ D V
Sbjct: 163 RENYFFSRIKYNLPIYIPNKGNNIVQFGYIEDLASAIELAVENSDFYGQ-IFNISGDEYV 221
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPK 326
+ A++C + I H D +
Sbjct: 222 AITEFAEICGKIMNKKSIIKHIDTE 246
>gi|296327911|ref|ZP_06870446.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296154867|gb|EFG95649.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 309
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 147/311 (47%), Gaps = 37/311 (11%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAG 133
KK+LI+ GG+ +G +AK L + + ++ G +N + + +R N I
Sbjct: 2 KKILIM----GGNQFVGKEIAKNFLEKDYTIYVLNRGTRKNIEGVFFLKVDRDNLI---- 53
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
E+ N++ + D+++D + + V + K+ G KQ++ ISSA +Y
Sbjct: 54 ---------EMENILKDIEVDIIVDVSAYTEEQVDILHKVMKN-GFKQYILISSASVYNN 103
Query: 194 ADEPPHVEGDVVKPDA--GHVQVEKYISE-------NFSN--WASFRPQYMIGSGNNKDC 242
+ P EG + G KY++E N N + FR Y+ G GNN D
Sbjct: 104 IECTPVNEGCQTGENLIWGDYAKNKYLAEKKTIENSNLYNFKYTIFRAFYIYGIGNNLDR 163
Query: 243 EEWFFDRIVRKRPVPIPGSG--MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
E +FF RI P+ IP +QF +V DL+ + ++EN + + IFN+ D
Sbjct: 164 ENYFFSRIKYNLPIFIPSKNNIIQF---GYVEDLALAIESSIENSDFYNQ-IFNISGDEY 219
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
VT+ A++C + I + + + I A+ FPFR ++ + + ++ G+R+T
Sbjct: 220 VTMSEFAEICGKVMAKKAVIKYVNTEENKIKARDWFPFREVNLFGDISKLENT-GFRNTY 278
Query: 361 NLPEDLKERFE 371
+L + L++ ++
Sbjct: 279 SLIQGLEKTYK 289
>gi|340754760|ref|ZP_08691496.1| isoflavone reductase [Fusobacterium sp. D12]
gi|421500006|ref|ZP_15947029.1| NADH(P)-binding protein, PF13460 family [Fusobacterium necrophorum
subsp. funduliforme Fnf 1007]
gi|313685769|gb|EFS22604.1| isoflavone reductase [Fusobacterium sp. D12]
gi|402269107|gb|EJU18453.1| NADH(P)-binding protein, PF13460 family [Fusobacterium necrophorum
subsp. funduliforme Fnf 1007]
Length = 312
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 129/279 (46%), Gaps = 27/279 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+L++ GG+ +G L + LL GH V + G+ +K + F+ V
Sbjct: 3 KILVM----GGNQFLGKALCESLLTLGHTVFALNRGN------RKNVRDVFHISVDRN-- 50
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
+ ++ + G+ D ++D +G V + + K + KQ+++ISSA IY+
Sbjct: 51 ----EENQLKKALSGLEVDYIVDISGYEPLQVSILLESMKGN-YKQYIYISSASIYQEIQ 105
Query: 196 EPPHVEGDVVKPDA--GHVQVEKYISE-----NFSN--WASFRPQYMIGSGNNKDCEEWF 246
P E D + ++ G K++SE N N + FRP Y+ G GNN D E +
Sbjct: 106 NIPAKEEDKIGENSIWGDYAKNKFLSEQEIPKNIGNAKYTIFRPFYIYGIGNNLDREAYI 165
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
F RI PV +P G + +V DL + + E + IFN+ + V++
Sbjct: 166 FKRIEHNLPVYLPNDGKEKIQFGYVEDLVHAIIYSF-GKEEYYNEIFNVSGEEIVSIKEY 224
Query: 307 AKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 345
+LCA+A VEI ++ + A+ FPFRN++ +
Sbjct: 225 VELCAKAMKKAVEIRYFFLEDTKWKARDWFPFRNVNLFG 263
>gi|422338333|ref|ZP_16419293.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp.
polymorphum F0401]
gi|355372971|gb|EHG20310.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp.
polymorphum F0401]
Length = 309
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 145/311 (46%), Gaps = 37/311 (11%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+LI+ GG+ +G + K+ LG + V ++ G + ++ F
Sbjct: 2 KKILIM----GGNQFVGKEIVKKFLGKDYTVYVLNRGTRKN--IEGVIF----------L 45
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK-- 192
KT + E+ N + + DV++D + + V + K+ KQ++ ISSA IY
Sbjct: 46 KTDRDNYIEMKNTLKDIEVDVIVDVSAYTEEQVNILHKVMKNK-FKQYILISSASIYNNI 104
Query: 193 ---PADEPPH-----VEGDVVKPD--AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC 242
P +E + GD K A + +E NF + FRP Y+ G GNN D
Sbjct: 105 KCTPVNEENQTGENLIWGDYAKNKYLAEKITIENSNLHNFK-YTIFRPFYIYGIGNNLDR 163
Query: 243 EEWFFDRIVRKRPVPIPGSG--MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
E +FF RI PV IP +QF +V DL+ + +++N + + IFN+ +
Sbjct: 164 ENYFFSRIKYNLPVFIPSKNNIIQF---GYVEDLALAIESSIDNSDFYNQ-IFNISGNEY 219
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
VT+ ++C + I + + + I A+ FPFR ++ + + ++ G+R+T
Sbjct: 220 VTMSEFVEICGKVINKKAMIEYINTEENKIKARDWFPFREVNLFGDISKLENT-GFRNTY 278
Query: 361 NLPEDLKERFE 371
+L + L++ ++
Sbjct: 279 SLVQGLEKTYK 289
>gi|419840604|ref|ZP_14363992.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Fusobacterium necrophorum subsp. funduliforme ATCC
51357]
gi|386907547|gb|EIJ72254.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Fusobacterium necrophorum subsp. funduliforme ATCC
51357]
Length = 312
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 129/279 (46%), Gaps = 27/279 (9%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+L++ GG+ +G L + LL GH V + G+ +K + F+ V
Sbjct: 3 KILVM----GGNQFLGKALCESLLTLGHAVFALNRGN------RKNIRDVFHISVDRN-- 50
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
+ ++ + G+ D ++D +G V + + K + KQ+++ISSA IY+
Sbjct: 51 ----EENQLKKALSGLEVDYIVDISGYEPLQVSILLESMKGN-YKQYIYISSASIYQEIQ 105
Query: 196 EPPHVEGDVVKPDA--GHVQVEKYISE-----NFSN--WASFRPQYMIGSGNNKDCEEWF 246
P E D + ++ G K++SE N N + FRP Y+ G GNN D E +
Sbjct: 106 NIPAKEEDKIGENSIWGDYAKNKFLSEQEIPKNIGNAKYTIFRPFYIYGIGNNLDREAYI 165
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
F RI PV +P G + +V DL + + E + IFN+ + V++
Sbjct: 166 FKRIEHNLPVYLPNDGKEKIQFGYVEDLVHAIIYSF-GKEEYYNEIFNVSGEEIVSIKEY 224
Query: 307 AKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 345
+LCA+A VEI ++ + A+ FPFRN++ +
Sbjct: 225 VELCAKAMKKAVEIRYFFLEDTKWKARDWFPFRNVNLFG 263
>gi|340757555|ref|ZP_08694152.1| nucleoside-diphosphate-sugar epimerase [Fusobacterium varium ATCC
27725]
gi|251834819|gb|EES63382.1| nucleoside-diphosphate-sugar epimerase [Fusobacterium varium ATCC
27725]
Length = 317
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 129/298 (43%), Gaps = 28/298 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
GG+ +G L + LL ++V ++ G S +K + NR E E
Sbjct: 8 GGNQFVGKKLCEFLLNKKYKVYVLNRGTRPSPEKAEVLKCNRNIE-------------KE 54
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD 203
+ + + D ++D + N + V + Q++ ISSA IY P E D
Sbjct: 55 LIECLENLRVDCIIDISAYNPEQVSLIQRIMAGRYC-QYILISSASIYNKMQNYPVKETD 113
Query: 204 VVKPDA--GHVQVEKYISENFS---------NWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
+ G +KY+ E + N+ FRP Y+ G NN D E + F R+
Sbjct: 114 STGANEIWGKYAEDKYLCEKITIENSKKLKFNYTIFRPFYIYGPENNLDRESYIFARLEN 173
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
P+ IP G + ++ DL + +++NP + IFN+ D ++T+ K+C+
Sbjct: 174 NMPIFIPDKGEERIQFGYIDDLCEAVNFSLDNPHFFNQ-IFNISGDESITIKDYIKMCSL 232
Query: 313 AAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 370
+G I + D + + A+ FPFRN + + + G+R+ +L E LK+ +
Sbjct: 233 ISGKQPLIYNIDLEKENLKARDWFPFRNKNLIGDISKIEKT-GFRNKYSLKEGLKKTY 289
>gi|222622705|gb|EEE56837.1| hypothetical protein OsJ_06446 [Oryza sativa Japonica Group]
Length = 899
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 41/46 (89%)
Query: 203 DVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
D VK +AGHV VEKYI+E F +WASFRPQYMIGSGNNKDCEEWFFD
Sbjct: 3 DAVKENAGHVSVEKYIAEQFGSWASFRPQYMIGSGNNKDCEEWFFD 48
>gi|254302849|ref|ZP_04970207.1| nucleoside-diphosphate-sugar epimerase [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
gi|148323041|gb|EDK88291.1| nucleoside-diphosphate-sugar epimerase [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
Length = 309
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 144/311 (46%), Gaps = 37/311 (11%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+LI+ GG+ +G +AK+ L + V ++ G + ++ F
Sbjct: 2 KKILIM----GGNQFVGKEIAKKFLEKNNTVYVLNRGTRKN--IEGVIF----------L 45
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK-- 192
KT + E+ N + + DV++D + + V + K+ KQ++ ISSA IY
Sbjct: 46 KTDRDNYIEMKNTLKDIEVDVIVDVSAYTEEQVNILHKVMKNK-FKQYILISSASIYNNI 104
Query: 193 ---PADEPPH-----VEGDVVKPD--AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC 242
P +E + GD K A + +E NF + FRP Y+ G GNN D
Sbjct: 105 KCTPVNEENQTGENLIWGDYAKNKYLAEKITIENSNLHNFK-YTIFRPFYIYGIGNNLDR 163
Query: 243 EEWFFDRIVRKRPVPIPGSG--MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
E +FF RI PV IP +QF ++ DL + ++EN + + IFN+ +
Sbjct: 164 ENYFFSRIKYNLPVFIPSKNNIIQF---GYIEDLVLAIESSIENSDFYNQ-IFNISGNEY 219
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
VT+ ++C + I + + + I A+ FPFR ++ + + ++ G+R+T
Sbjct: 220 VTMSEFVEICGKVINKKAMIEYINTEENKIKARDWFPFREVNLFGDISKLENT-GFRNTY 278
Query: 361 NLPEDLKERFE 371
+L + L++ ++
Sbjct: 279 SLVQGLEKTYK 289
>gi|260494255|ref|ZP_05814386.1| isoflavone reductase [Fusobacterium sp. 3_1_33]
gi|336401276|ref|ZP_08582047.1| hypothetical protein HMPREF0404_01338 [Fusobacterium sp. 21_1A]
gi|260198401|gb|EEW95917.1| isoflavone reductase [Fusobacterium sp. 3_1_33]
gi|336161186|gb|EGN64193.1| hypothetical protein HMPREF0404_01338 [Fusobacterium sp. 21_1A]
Length = 309
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 146/314 (46%), Gaps = 43/314 (13%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK---MKKPPFNRFNEIVS 131
KK+L++ GG+ +G + K+ L ++V ++ G +++ + N FNE+
Sbjct: 2 KKILVM----GGNQFVGKEIVKKFLEKKYQVYVLNRGMRKNNEEAIFLEADRNNFNEM-- 55
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
NV+ + D+++D + V + K+ KQ++ ISSA +Y
Sbjct: 56 -------------ENVLKNIDVDIIVDVSAYTERQVDILHKIMKNR-FKQYILISSASVY 101
Query: 192 KPADEPPHVEGDVVKPDA--GHVQVEKYISE----------NFSNWASFRPQYMIGSGNN 239
+ P E + G KY++E NF + FRP Y+ G GNN
Sbjct: 102 NNIESTPVNEDSQTGENLLWGEYSKNKYLAEKKTIENSNLYNFK-YTIFRPFYIYGIGNN 160
Query: 240 KDCEEWFFDRIVRKRPVPIP--GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
D E +FF RI P+ IP + +QF +V DL+S++ ++EN + + FN+
Sbjct: 161 LDRENYFFSRIKYNLPIYIPSKNNTIQF---GYVEDLASVIENSMENSDFYNQ-TFNISG 216
Query: 298 DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWR 357
+ VT+ +++C + I + + + I A+ FPFR ++ + + ++ G+R
Sbjct: 217 NEYVTMSEFSEICGKVMSKKAIIKYINTEEKKIKARDWFPFREVNLFGDISKLENT-GFR 275
Query: 358 STTNLPEDLKERFE 371
+ +L + L++ ++
Sbjct: 276 NMYSLVQGLEKTYK 289
>gi|373497022|ref|ZP_09587563.1| hypothetical protein HMPREF0402_01436 [Fusobacterium sp. 12_1B]
gi|371964329|gb|EHO81853.1| hypothetical protein HMPREF0402_01436 [Fusobacterium sp. 12_1B]
Length = 316
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 137/321 (42%), Gaps = 39/321 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+L++ GG+ +G L + LL G+ V I+ NR N I G
Sbjct: 2 KKILLM----GGNQFLGKRLCEFLLDKGYTVYIL---------------NRGNRINPDGA 42
Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + D ++ + ++ D ++D + D + + + Q++ ISSA IY
Sbjct: 43 EFLKCDRNIKDDLCKSLKDISIDYIVDISAYTRDQASLIQE-VMTGKYSQYILISSASIY 101
Query: 192 KPADEPPHVEGDVVKPDA--GHVQVEKYISENFS---------NWASFRPQYMIGSGNNK 240
P E D + G +KY+SE + + FRP Y+ G NN
Sbjct: 102 NDMKHIPAKETDNTGANEVWGKYAEDKYLSEKITIENAEKLNFKYTIFRPFYIYGPENNL 161
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
D E + F R PV IP G + ++ DL + ++ N + + IFN+ +
Sbjct: 162 DRESYMFARFENNMPVFIPDKGEEIIQFGYIDDLCEAVNFSLGNSDFFNQ-IFNISGNER 220
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
+T+ A+LC+ I + D + + A+ FPFRN + + G+++
Sbjct: 221 ITIKDYAELCSNICNKKPMIQYIDLEKENLKARDWFPFRNENLIGDISKITKT-GFKNKY 279
Query: 361 NLPEDLKERFEEYVKIGRDKK 381
+L E L+E Y+ + ++KK
Sbjct: 280 SLEEGLRET---YLHLKKNKK 297
>gi|421526822|ref|ZP_15973428.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum ChDC F128]
gi|402256930|gb|EJU07406.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum ChDC F128]
Length = 309
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 144/314 (45%), Gaps = 43/314 (13%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAG 133
KK+LI+ GG+ +G + K L + V ++ G +N + + +R N I
Sbjct: 2 KKILIM----GGNQFVGKEIVKNFLEKDYIVYVLNRGTRKNIEGVFFLKADRNNYI---- 53
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK- 192
E N++ + D+++D + + V + K KQ++ ISSA +Y
Sbjct: 54 ---------ETENILKNIEVDIIVDVSAYTEEQVDILQKVMKDR-FKQYILISSASVYNS 103
Query: 193 ----PADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSN--WASFRPQYMIGSGNN 239
P +E + +++ D KY++E N N + +RP Y+ G GNN
Sbjct: 104 IESAPVNEESEIGENLIWGDYAK---NKYLAEQKTIENSNLYNFKYTIYRPFYIYGIGNN 160
Query: 240 KDCEEWFFDRIVRKRPVPIPGSG--MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
D E +FF RI P+ IP +QF +V DL+ + ++ N + + IFN+
Sbjct: 161 LDRENYFFSRIKYDLPIYIPSKNNIIQF---GYVEDLALAIESSINNSDFYNQ-IFNISG 216
Query: 298 DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWR 357
D VT+ ++CA+ I + D + I + FPFR ++ + + ++ G+R
Sbjct: 217 DEYVTMSEFIEICAKVINKKTTIKYVDTAKSQIKVRDWFPFREVNLFGDISKLEN-TGFR 275
Query: 358 STTNLPEDLKERFE 371
+T +L + L++ ++
Sbjct: 276 NTYSLVQGLEKTYK 289
>gi|237742294|ref|ZP_04572775.1| isoflavone reductase [Fusobacterium sp. 4_1_13]
gi|256845573|ref|ZP_05551031.1| isoflavone reductase [Fusobacterium sp. 3_1_36A2]
gi|421145378|ref|ZP_15605256.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|229429942|gb|EEO40154.1| isoflavone reductase [Fusobacterium sp. 4_1_13]
gi|256719132|gb|EEU32687.1| isoflavone reductase [Fusobacterium sp. 3_1_36A2]
gi|395488227|gb|EJG09104.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 309
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 148/315 (46%), Gaps = 45/315 (14%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAG 133
KK+LI+ GG+ +G + K+ L + + I+ G +N +++ +R N I
Sbjct: 2 KKILIM----GGNQFVGKEIVKKFLEKDYTIYILNRGTRKNIEEVIFFKVDRDNFI---- 53
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK- 192
E+ N++ + D+++D + + V + K+ KQ++ ISSA +Y
Sbjct: 54 ---------EMENILKNIDVDIIIDVSAYTEEQVDILHKVMKNR-FKQYILISSASVYNN 103
Query: 193 ----PADEPPHVEGDVVKPDAGHVQVEKYISE----------NFSNWASFRPQYMIGSGN 238
PA+E +++ D KY++E NF + FRP Y+ G GN
Sbjct: 104 IESTPANEESQTGENLIWGDYAK---NKYLAEKKTIENSKIYNFK-YTIFRPFYIYGVGN 159
Query: 239 NKDCEEWFFDRIVRKRPVPIPGSG--MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
N D E +FF RI P+ IP +QF +V DL+ + ++ N + + FN+
Sbjct: 160 NLDRENYFFSRIKYNLPIYIPSKNNIIQF---GYVEDLALAIESSIGNSDFYNQT-FNIS 215
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW 356
D VT+ +++C + I + + + I A+ FPFR ++ + + ++ G+
Sbjct: 216 GDEYVTMSEFSEICGKVMNKKAIIKYINTEENKIKARDWFPFREVNLFGDISKLEN-TGF 274
Query: 357 RSTTNLPEDLKERFE 371
R+T +L + L++ ++
Sbjct: 275 RNTYSLIQGLEKTYK 289
>gi|336418685|ref|ZP_08598957.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 11_3_2]
gi|336164362|gb|EGN67269.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 11_3_2]
Length = 309
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 145/314 (46%), Gaps = 43/314 (13%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK---MKKPPFNRFNEIVS 131
KK+L++ GG+ +G + K+ L ++V + G +++ + N FNE+
Sbjct: 2 KKILVM----GGNQFVGKEIVKKFLEKKYQVYALNRGMRKNNEEAIFLEADRNNFNEM-- 55
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
NV+ + D+++D + V + K+ KQ++ ISSA +Y
Sbjct: 56 -------------KNVLKNIDVDIIVDVSAYTERQVDILHKTMKNR-FKQYILISSASVY 101
Query: 192 KPADEPPHVEGDVVKPDA--GHVQVEKYISE----------NFSNWASFRPQYMIGSGNN 239
+ P E + G KY++E NF + FRP Y+ G GNN
Sbjct: 102 NNIESTPVNEDSQTGENLLWGEYSKNKYLAEKKTIENSNLYNFK-YTIFRPFYIYGIGNN 160
Query: 240 KDCEEWFFDRIVRKRPVPIP--GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
D E +FF RI P+ IP + +QF +V DL+S++ ++EN + + FN+
Sbjct: 161 LDRENYFFSRIKYNLPIYIPSKNNTIQF---GYVEDLASVIENSMENSDFYNQ-TFNISG 216
Query: 298 DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWR 357
+ VT+ +++C + I + + + I A+ FPFR ++ + + ++ G+R
Sbjct: 217 NEYVTMSEFSEICGKVMSKKAIIKYINTEEKKIKARDWFPFREVNLFGDISKLENT-GFR 275
Query: 358 STTNLPEDLKERFE 371
+ +L + L++ ++
Sbjct: 276 NMYSLVQGLEKTYK 289
>gi|34763307|ref|ZP_00144264.1| Isoflavone reductase [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|27887030|gb|EAA24145.1| Isoflavone reductase [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
Length = 309
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 147/315 (46%), Gaps = 45/315 (14%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAG 133
KK+LI+ GG+ +G + K+ L + + I+ G +N +++ +R N I
Sbjct: 2 KKILIM----GGNQFVGKEIVKKFLEKDYTIYILNRGTRKNIEEVIFFKVDRDNFI---- 53
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK- 192
E+ N++ + D+++D + + V + K+ KQ++ ISSA +Y
Sbjct: 54 ---------EMENILKNIDVDIIIDVSAYTEEQVDILHKVMKNR-FKQYILISSASVYNN 103
Query: 193 ----PADEPPHVEGDVVKPDAGHVQVEKYISE----------NFSNWASFRPQYMIGSGN 238
PA+E +++ D KY++E NF + FRP Y+ G GN
Sbjct: 104 IESTPANEESQTGENLIWGDYAK---NKYLAEKKTIENSKIYNFK-YTIFRPFYIYGVGN 159
Query: 239 NKDCEEWFFDRIVRKRPVPIPGSG--MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
N D E +FF RI P+ IP +QF +V DL + ++ N + + FN+
Sbjct: 160 NLDRENYFFSRIKYNLPIYIPSKNNIIQF---GYVEDLVLAIESSIGNSDFYNQT-FNIS 215
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW 356
D VT+ +++C + I + + + I A+ FPFR ++ + + ++ G+
Sbjct: 216 GDEYVTMSEFSEICGKVMNKKAIIKYINTEENKIKARDWFPFREVNLFGDISKLEN-TGF 274
Query: 357 RSTTNLPEDLKERFE 371
R+T +L + L++ ++
Sbjct: 275 RNTYSLIQGLEKTYK 289
>gi|237744159|ref|ZP_04574640.1| isoflavone reductase [Fusobacterium sp. 7_1]
gi|229431388|gb|EEO41600.1| isoflavone reductase [Fusobacterium sp. 7_1]
Length = 309
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 146/311 (46%), Gaps = 37/311 (11%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+L++ GG+ +G + K+ L ++V ++ G M+K N+ I
Sbjct: 2 KKILVM----GGNQFVGKEIVKKFLEKKYQVYVLNRG------MRK---NKEEAIFLEAD 48
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+ + +V + + D+++D + V + K+ KQ++ ISSA +Y
Sbjct: 49 RNNFNVMKKV---LKNIDVDIIVDVSAYTERQVDILHKIMKNR-FKQYILISSASVYNNI 104
Query: 195 DEPPHVEGDVVKPDA--GHVQVEKYISE----------NFSNWASFRPQYMIGSGNNKDC 242
+ P E + G KY++E NF + FRP Y+ G GNN D
Sbjct: 105 ESTPVNEDSQTGENLLWGEYSKNKYLAEKKTIENSNLYNFK-YTIFRPFYIYGIGNNLDR 163
Query: 243 EEWFFDRIVRKRPVPIP--GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
E +FF RI P+ IP + +QF +V DL+S++ ++EN + + IFN+ +
Sbjct: 164 ENYFFSRIKYNLPIYIPSKNNTIQF---GYVEDLASVIENSMENSDFFNQ-IFNISGNEY 219
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
VT+ +++C + I + + + I A+ FPFR ++ + + ++ G+R+
Sbjct: 220 VTMSEFSEICGKVMSKKAIIKYINTEEKKIKARDWFPFREVNLFGDISKLENT-GFRNMY 278
Query: 361 NLPEDLKERFE 371
+L + L++ ++
Sbjct: 279 SLVQGLEKTYK 289
>gi|404367032|ref|ZP_10972408.1| hypothetical protein FUAG_02097 [Fusobacterium ulcerans ATCC 49185]
gi|313689747|gb|EFS26582.1| hypothetical protein FUAG_02097 [Fusobacterium ulcerans ATCC 49185]
Length = 316
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 39/321 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+L++ GG+ +G L + LL G+ V I+ NR N I G
Sbjct: 2 KKILLM----GGNQFLGKRLCEFLLDKGYTVYIL---------------NRGNRINPDGA 42
Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + D ++ + ++ D ++D + D + + + Q++ ISSA IY
Sbjct: 43 EFLKCDRNIKDDLCKSLKDISIDYIVDISAYTRDQASLIQE-VMTGKYSQYILISSASIY 101
Query: 192 KPADEPPHVEGDVVKPDA--GHVQVEKYISENFS---------NWASFRPQYMIGSGNNK 240
P E D + G +KY+SE + + FRP Y+ NN
Sbjct: 102 NDMKHIPAKETDNTGANEVWGKYAEDKYLSEKITIENAEKLNFKYTIFRPFYIYDPENNL 161
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
D E + F R PV IP G + ++ DL + ++ N + + IFN+ +
Sbjct: 162 DRESYMFARFENNMPVFIPDKGEEIIQFGYIDDLCEAVNFSLGNSDFFNQ-IFNISGNER 220
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
+T+ A+LC+ I + D + + A+ FPFRN + + G+++
Sbjct: 221 ITIKDYAELCSNICNKKPMIQYIDLEKENLKARDWFPFRNENLIGDISKITKT-GFKNKY 279
Query: 361 NLPEDLKERFEEYVKIGRDKK 381
+L E L+E Y+ + ++KK
Sbjct: 280 SLEEGLRET---YLHLKKNKK 297
>gi|268609759|ref|ZP_06143486.1| dTDP-glucose 4,6-dehydratase [Ruminococcus flavefaciens FD-1]
Length = 304
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 114/280 (40%), Gaps = 33/280 (11%)
Query: 71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV 130
A E +L+ +GG + A+ + GH V ++ NR N+
Sbjct: 2 AGEYMNILV----TGGTVFASRFTAEYFIEKGHNVYVL---------------NRGNDEQ 42
Query: 131 SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
S G + D +G+ + FD VLD N V+ + D G ++ +SS+ +
Sbjct: 43 SVGALHIKADRHSLGDTLKKYRFDAVLDVTAYNAQDVKDLVDGLGEYGT--YVLVSSSAV 100
Query: 191 YKPADEPPHVEGDVVKPDA-------GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE 243
Y P E + P++ + EKY++EN S++ RP Y+ G NN E
Sbjct: 101 YPETLPQPFSEDQKIGPNSIWGAYGKDKISAEKYVTENISDYYIIRPPYLYGPMNNVYRE 160
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
+ F+ R P +P G H+RD+ + + + E + I+N+ + V++
Sbjct: 161 AFVFECAERNMPFYLPKDGSMPLQFFHIRDMCRFMEILIT--EKPAERIYNVGNATTVSI 218
Query: 304 DGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 343
+C Q G E + P + I + FPF + +
Sbjct: 219 REWVTVCYQLCGKAPEFI---PVSGDIPQRNYFPFYDYAY 255
>gi|359411732|ref|ZP_09204197.1| NAD-dependent epimerase/dehydratase [Clostridium sp. DL-VIII]
gi|357170616|gb|EHI98790.1| NAD-dependent epimerase/dehydratase [Clostridium sp. DL-VIII]
Length = 311
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 135/308 (43%), Gaps = 28/308 (9%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K +LI+ GG + LAK L+ G++V I+T G +K + + +
Sbjct: 2 KSILIM----GGTTFVSRCLAKYLIDQGYDVDILTRG------LKTIDYGGYKNHLICDR 51
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K+ E+ V+ G ++ + D + + V + S +K+++F SS +Y
Sbjct: 52 KS----KNELQKVLNGRQYEFIFDISAYKKEDVEILLASIDRSSLKKYIFCSSGAVYTET 107
Query: 195 DE---PPHVEGDVVKPDAGHVQVEKYISENFSN-----WASFRPQYMIGSGNNKDCEEWF 246
++ GD P+ G+ +K +E+F + FRP Y+ G NN E +F
Sbjct: 108 NDFANESFERGD--NPNWGNYGTDKKEAEDFIVTSKIPYIIFRPTYIYGENNNLYREAYF 165
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
FDRI + +P+P T H+ DL + + N + I+N+ + V+ + +
Sbjct: 166 FDRIKESKVIPMPYGNNTVTQFIHIEDLVKVFESVMFNEKICR--IYNVTNSDIVSFEEL 223
Query: 307 AKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM-HFYAEPRAAKDILGWRSTTNLPED 365
+C + + I D + ++ + FPFR++ + R D L T +L E
Sbjct: 224 ILMCGKVLKIDPIIKKIDTQKIKVNTRTYFPFRDVTYLLNTERLINDDLH-NPTISLEEG 282
Query: 366 LKERFEEY 373
L++ ++ Y
Sbjct: 283 LRKTYKWY 290
>gi|423137043|ref|ZP_17124686.1| hypothetical protein HMPREF9942_00824 [Fusobacterium nucleatum
subsp. animalis F0419]
gi|371961110|gb|EHO78753.1| hypothetical protein HMPREF9942_00824 [Fusobacterium nucleatum
subsp. animalis F0419]
Length = 309
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 145/311 (46%), Gaps = 37/311 (11%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+L++ GG+ +G + K+ L ++V ++ G M+K N+ I
Sbjct: 2 KKILVM----GGNQFVGKEIVKKFLEKKYQVYVLNRG------MRK---NKEEAIFLEAD 48
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+ + +V + + D+++D + V + K+ KQ++ ISSA +Y
Sbjct: 49 RNNFNVMEKV---LKNIDVDIIVDVSAYTERQVDILHKIMKNR-FKQYILISSASVYNNI 104
Query: 195 DEPPHVEGDVVKPDA--GHVQVEKYISE----------NFSNWASFRPQYMIGSGNNKDC 242
+ P E + G KY++E NF + FRP Y+ G GNN D
Sbjct: 105 ESTPVNEDSQTGENLLWGEYSKNKYLAEKKTIENSNLYNFK-YTIFRPFYIYGIGNNLDR 163
Query: 243 EEWFFDRIVRKRPVPIP--GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
E +FF RI P+ IP + +QF +V DL+S++ ++EN + + FN+ +
Sbjct: 164 ENYFFSRIKYNLPIYIPSKNNTIQF---GYVEDLASVIENSMENSDFYNQ-TFNISGNEY 219
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
VT+ +++C + I + + + I A+ FPFR ++ + + ++ G+R+
Sbjct: 220 VTMSEFSEICGKVMSKKAIIKYINTEEKKIKARDWFPFREVNLFGDISKLENT-GFRNMY 278
Query: 361 NLPEDLKERFE 371
+L + L++ ++
Sbjct: 279 SLVQGLEKTYK 289
>gi|294785138|ref|ZP_06750426.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 3_1_27]
gi|294486852|gb|EFG34214.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 3_1_27]
Length = 309
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 147/315 (46%), Gaps = 45/315 (14%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAG 133
KK+LI+ GG+ +G + K+ L + + I+ G +N +++ +R N I
Sbjct: 2 KKILIM----GGNQFVGKEIVKKFLEKDYTIYILNRGTRKNIEEVIFFKVDRDNFI---- 53
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK- 192
E+ N++ + D+++D + + V + K+ KQ++ ISSA +Y
Sbjct: 54 ---------EMENILKNIDVDIIIDVSAYTEEQVDILHKVMKNR-FKQYILISSASVYNN 103
Query: 193 ----PADEPPHVEGDVVKPDAGHVQVEKYISE----------NFSNWASFRPQYMIGSGN 238
PA+E +++ D KY++E NF + FRP + G GN
Sbjct: 104 IESTPANEESQTGENLIWGDYAK---NKYLAEKKTIENSKIYNFK-YTIFRPFNIYGVGN 159
Query: 239 NKDCEEWFFDRIVRKRPVPIPGSG--MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
N D E +FF RI P+ IP +QF +V DL+ + ++ N + + FN+
Sbjct: 160 NLDRENYFFSRIKYNLPIYIPSKNNIIQF---GYVEDLALAIESSIGNSDFYNQT-FNIS 215
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW 356
D VT+ +++C + I + + + I A+ FPFR ++ + + ++ G+
Sbjct: 216 GDEYVTMSEFSEICGKVMNKKAIIKYINTEENKIKARDWFPFREVNLFGDISKLEN-TGF 274
Query: 357 RSTTNLPEDLKERFE 371
R+T +L + L++ ++
Sbjct: 275 RNTYSLIQGLEKTYK 289
>gi|289765685|ref|ZP_06525063.1| LOW QUALITY PROTEIN: isoflavone reductase [Fusobacterium sp. D11]
gi|289717240|gb|EFD81252.1| LOW QUALITY PROTEIN: isoflavone reductase [Fusobacterium sp. D11]
Length = 300
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 118/243 (48%), Gaps = 21/243 (8%)
Query: 143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
E+ NV+ + D+++D + V + K+ KQ++ ISSA +Y + P E
Sbjct: 45 EMKNVLKNIDVDIIVDVSAYTERQVDILHKTMKNR-FKQYILISSASVYNNIESTPVNED 103
Query: 203 DVVKPDA--GHVQVEKYISE----------NFSNWASFRPQYMIGSGNNKDCEEWFFDRI 250
+ G KY++E NF + FRP Y+ G GNN D E +FF RI
Sbjct: 104 SQTGENLLWGEYSKNKYLAEKKTIENSNLYNFK-YTIFRPFYIYGIGNNLDRENYFFSRI 162
Query: 251 VRKRPVPIP--GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
P+ IP + +QF +V DL+S++ ++EN + + FN+ + VT+ ++
Sbjct: 163 KYNLPIYIPSKNNTIQF---GYVEDLASVIENSMENSDFYNQ-TFNISGNEYVTMSEFSE 218
Query: 309 LCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 368
+C + I + + + I A+ FPFR ++ + + ++ G+R+ +L + L++
Sbjct: 219 ICGKVMSKKAIIKYINTEEKKIKARDWFPFREVNLFGDISKLENT-GFRNMYSLVQGLEK 277
Query: 369 RFE 371
++
Sbjct: 278 TYK 280
>gi|126701231|ref|YP_001090128.1| hypothetical protein CD630_36040 [Clostridium difficile 630]
gi|254977233|ref|ZP_05273705.1| hypothetical protein CdifQC_18065 [Clostridium difficile QCD-66c26]
gi|255094562|ref|ZP_05324040.1| hypothetical protein CdifC_18181 [Clostridium difficile CIP 107932]
gi|255102821|ref|ZP_05331798.1| hypothetical protein CdifQCD-6_18561 [Clostridium difficile
QCD-63q42]
gi|255308640|ref|ZP_05352811.1| hypothetical protein CdifA_18761 [Clostridium difficile ATCC 43255]
gi|255316317|ref|ZP_05357900.1| hypothetical protein CdifQCD-7_18264 [Clostridium difficile
QCD-76w55]
gi|255518977|ref|ZP_05386653.1| hypothetical protein CdifQCD-_17798 [Clostridium difficile
QCD-97b34]
gi|255652157|ref|ZP_05399059.1| hypothetical protein CdifQCD_18365 [Clostridium difficile
QCD-37x79]
gi|260685125|ref|YP_003216410.1| hypothetical protein CD196_3396 [Clostridium difficile CD196]
gi|260688783|ref|YP_003219917.1| hypothetical protein CDR20291_3442 [Clostridium difficile R20291]
gi|306521884|ref|ZP_07408231.1| hypothetical protein CdifQ_20781 [Clostridium difficile QCD-32g58]
gi|384362801|ref|YP_006200653.1| hypothetical protein CDBI1_17660 [Clostridium difficile BI1]
gi|423082905|ref|ZP_17071487.1| NAD dependent epimerase/dehydratase family protein [Clostridium
difficile 002-P50-2011]
gi|423086428|ref|ZP_17074833.1| NAD dependent epimerase/dehydratase family protein [Clostridium
difficile 050-P50-2011]
gi|423089564|ref|ZP_17077921.1| NAD dependent epimerase/dehydratase family protein [Clostridium
difficile 70-100-2010]
gi|115252668|emb|CAJ70511.1| conserved hypothetical protein [Clostridium difficile 630]
gi|260211288|emb|CBA66856.1| conserved hypothetical protein [Clostridium difficile CD196]
gi|260214800|emb|CBE07533.1| conserved hypothetical protein [Clostridium difficile R20291]
gi|357546861|gb|EHJ28766.1| NAD dependent epimerase/dehydratase family protein [Clostridium
difficile 050-P50-2011]
gi|357546984|gb|EHJ28883.1| NAD dependent epimerase/dehydratase family protein [Clostridium
difficile 002-P50-2011]
gi|357558041|gb|EHJ39553.1| NAD dependent epimerase/dehydratase family protein [Clostridium
difficile 70-100-2010]
Length = 312
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 124/276 (44%), Gaps = 24/276 (8%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K +LI+ GG IG LAK L+ G+++ I+T G + D +N F E +
Sbjct: 2 KSILIM----GGSDFIGSALAKRLIKCGYQIDILTNGKKEID------YNGFKEHLICDR 51
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K ++ N++ G +D + D + V + D+ +K+++ +S+ +YK +
Sbjct: 52 KV----RKDMENIITGRKYDYIYDMTAYTKEDVSNLIDFISMDNLKKYIVLSAGAVYKDS 107
Query: 195 DEPPHVEGDVV------KPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
E + K + E +I + + RP Y+ G NN E +FF+
Sbjct: 108 GRNIKEENEKGENENWGKYGLNKKEAEDFIINSPIPYIIIRPTYIYGENNNLYREYYFFE 167
Query: 249 RIVRKRPVPIPGSGMQFTN-IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
+I + +P+P G Q +N ++ DL +L ++NP + +N+ + + ++ D +
Sbjct: 168 KIEKNEKIPVP-KGKQVSNQFIYIGDLVKVLESIMKNPHVREA--YNVTNPQLISWDDLI 224
Query: 308 KLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 343
C + G I + D + + FPFRN+ F
Sbjct: 225 YTCGEIIGKEPIIKYVDMEKVEFRERTYFPFRNIDF 260
>gi|373122412|ref|ZP_09536275.1| hypothetical protein HMPREF0982_01204 [Erysipelotrichaceae
bacterium 21_3]
gi|371663489|gb|EHO28677.1| hypothetical protein HMPREF0982_01204 [Erysipelotrichaceae
bacterium 21_3]
Length = 299
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 129/309 (41%), Gaps = 38/309 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KKVLI +GG + YLA+ + +EV ++ NR + S G
Sbjct: 2 KKVLI----TGGTVFVSRYLAEYYVAKKYEVYVL---------------NRNTKKQSQGV 42
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K + D ++G V+ G+ FD+V+D + D V + + S ++ ISS+ +Y
Sbjct: 43 KLIQADRHDLGTVLHGIHFDIVVDTAYTSAD-VEMLLEALDSYT--DYILISSSAVYPEN 99
Query: 195 DEPPHVEGDVV-------KPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
P E +V K ++ E + E N RP Y+ G NN E + F
Sbjct: 100 ASKPFKEDSIVNVNRFWGKYGTDKIEAEAKLMERNPNAYIIRPPYLYGQMNNVYREAFIF 159
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
D + R +P +G HV DL + + +EN +IFN+ + V++
Sbjct: 160 DCALANRKFYLPHNGEMKLQFFHVHDLCRFIDILLENK--PRQHIFNVGNKDMVSIREWV 217
Query: 308 KLCAQAAGLPVEIVH-YDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDL 366
+LC VE V+ YD I + F F + +Y + ++ + L E L
Sbjct: 218 ELCYHITNHQVEFVNVYD----DIKQRNYFCFNDYEYYLDVSEQYKLM--KEIKPLNEGL 271
Query: 367 KERFEEYVK 375
KE F Y+K
Sbjct: 272 KEAFNWYIK 280
>gi|414153381|ref|ZP_11409708.1| putative UDP-glucose 4-epimerase [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411455763|emb|CCO07611.1| putative UDP-glucose 4-epimerase [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 306
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 137/319 (42%), Gaps = 50/319 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG ++A+ LL +GHEV ++ S P + ++ DPA
Sbjct: 6 TGGAGFIGSHVAEALLAAGHEVYVIDNLAGGSTANLPPGVTFCRQDIT--------DPAV 57
Query: 144 VGNVVGGVTFDVVLD----------------NNGKNLDAVRPVADWAKSSGVKQFLFISS 187
VG +VG + V++ + G N+ + + + GV + +F SS
Sbjct: 58 VG-LVGEIKPRVIMHQAAQVAVPVSLRDPVFDAGVNIIGTLHLLEACRQHGVAKIVFASS 116
Query: 188 AGIYKPADEPPHVEGDVVKPDAGH----VQVEKYIS---ENFS-NWASFRPQYMIGSGNN 239
A +Y P E P +G+ VEKY++ E + W + R + G +
Sbjct: 117 AAVYGTPRCLPLDESHPAAPLSGYGVAKYAVEKYLAAYGELYGLRWTALRYANVYGPRQD 176
Query: 240 KDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
E F DR++R++P I G G Q + +V+D+++ LA+E I N+
Sbjct: 177 AQGEGGVVAIFIDRLLRRQPAVIFGDGQQTRDFVYVKDVAAANLLAMER---GDGRILNI 233
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILG 355
+ RAVT+ + +L Q +E V+ P+ I +H Y + RAA LG
Sbjct: 234 STGRAVTVQQLYQLIRQQTASHLEPVYRPPRPGDI----------VHSYLDNRAAVACLG 283
Query: 356 WRSTTNLPEDLKERFEEYV 374
W+ +L + L+E Y+
Sbjct: 284 WQPRYDLADGLRETVAYYL 302
>gi|167757222|ref|ZP_02429349.1| hypothetical protein CLORAM_02772 [Clostridium ramosum DSM 1402]
gi|365830095|ref|ZP_09371680.1| hypothetical protein HMPREF1021_00444 [Coprobacillus sp. 3_3_56FAA]
gi|167703397|gb|EDS17976.1| NAD dependent epimerase/dehydratase family protein [Clostridium
ramosum DSM 1402]
gi|365263849|gb|EHM93671.1| hypothetical protein HMPREF1021_00444 [Coprobacillus sp. 3_3_56FAA]
Length = 301
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 133/308 (43%), Gaps = 37/308 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+L+ +GG + ++A ++V ++ NR N G
Sbjct: 3 KKILV----TGGTVFVSKFVATYFKNHDYDVYVL---------------NRGNRKQIEGV 43
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY--- 191
K + GD +GN++ G FDVV D V+ + + +GVK ++ ISS+ +Y
Sbjct: 44 KLIKGDRHHLGNLLKGYDFDVVFDVTAYTKQDVKDLLEGL--NGVKDYILISSSAVYPES 101
Query: 192 --KPADEPPHVEGDVVKPDAG--HVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
+P E V + + D G ++ E Y+ + RP Y+ G N E + F
Sbjct: 102 LSQPFKEEQKVGRNSIWGDYGSNKIEAENYLLSHIPQAYILRPPYLYGPMQNVYREPFVF 161
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSML-TLAVENPEAASSNIFNLVSDRAVTLDGM 306
+ ++KR +P G HV DL ++ T+ ++P +I N+ + V ++
Sbjct: 162 ECALKKRSFYLPNDGKMLLQFFHVEDLCKLMETIIKKHPH---DHIMNVGNSEIVDINKF 218
Query: 307 AKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDL 366
+LC Q G+P+ V+ + + F F N ++ + +L S +L E L
Sbjct: 219 VELCYQVVGVPLNKVYVTKHD---NQRDYFSFHNYNYVLDVTKQNQLLP--SQKSLFEGL 273
Query: 367 KERFEEYV 374
+E ++ Y+
Sbjct: 274 EESYQWYL 281
>gi|374626317|ref|ZP_09698730.1| hypothetical protein HMPREF0978_02050 [Coprobacillus sp.
8_2_54BFAA]
gi|373914174|gb|EHQ46006.1| hypothetical protein HMPREF0978_02050 [Coprobacillus sp.
8_2_54BFAA]
Length = 301
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 116/260 (44%), Gaps = 18/260 (6%)
Query: 123 FNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQF 182
NR N G K + GD +GN++ G FDVV D V+ + + +GVK +
Sbjct: 32 LNRGNRKQIEGVKLIKGDRHHLGNLLKGYDFDVVFDVTAYTKQDVKDLLEGL--NGVKDY 89
Query: 183 LFISSAGIY-----KPADEPPHVEGDVVKPDAG--HVQVEKYISENFSNWASFRPQYMIG 235
+ ISS+ +Y +P E V + + D G ++ E Y+ + RP Y+ G
Sbjct: 90 ILISSSAVYPESLSQPFKEEQKVGRNSIWGDYGSNKIEAENYLLSHIPQAYILRPPYLYG 149
Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML-TLAVENPEAASSNIFN 294
N E + F+ ++KR +P G HV DL ++ T+ ++P +I N
Sbjct: 150 PMQNVYREPFVFECALKKRSFYLPNGGKMLLQFFHVEDLCRLMETIIKKHPH---DHIMN 206
Query: 295 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 354
+ + V ++ +LC Q G+P+ V+ + + F F N ++ + +L
Sbjct: 207 VGNSEIVDINKFVELCYQVVGVPLNKVYVTKHD---NQRDYFSFHNYNYVLDVTKQNQLL 263
Query: 355 GWRSTTNLPEDLKERFEEYV 374
S +L E L+E ++ Y+
Sbjct: 264 P--SQKSLFEGLEESYQWYL 281
>gi|291542750|emb|CBL15860.1| Nucleoside-diphosphate-sugar epimerases [Ruminococcus bromii L2-63]
Length = 300
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 133/310 (42%), Gaps = 45/310 (14%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI +GG + Y A+ + G EV ++ NR + S G
Sbjct: 2 KILI----TGGTTFVSRYAAEHFVSKGEEVFVL---------------NRNSRPQSQGVH 42
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGV--KQFLFISSAGIYKP 193
+ D +GN FD++LD + ++ + SGV ++FISS+ +Y
Sbjct: 43 LINCDRLNLGNKFANEHFDLILDITAYTDEHIKALL----RSGVSFDDYIFISSSAVYPE 98
Query: 194 ADEPPHVEGDV-----VKPDAG--HVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWF 246
+ P E V D G + EKY+ + N RP Y G N E +
Sbjct: 99 TNPQPFAENQTCGKNSVWGDYGINKLNAEKYLLDTVQNAYILRPPYFYGMYENLYREAFP 158
Query: 247 FDRIVRKRPVPIPGSG---MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
FD + R IP +G +QF N++ DL + + +E + S++IFN+ + VT+
Sbjct: 159 FDCAILDRKFYIPENGDMKLQFFNVS---DLCKFIEIIIE--KHPSNHIFNVGNKETVTI 213
Query: 304 DGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLP 363
+LC + AG VE V + I + F F + + + R +++ +T +L
Sbjct: 214 KEWVELCYKVAGREVEFV---SVSKDIPQRDYFCFYDYEYVLDVRKQNELMP--NTVSLY 268
Query: 364 EDLKERFEEY 373
+ LKE FE Y
Sbjct: 269 DGLKEEFEWY 278
>gi|237735693|ref|ZP_04566174.1| dTDP-glucose 4,6-dehydratase [Mollicutes bacterium D7]
gi|229381438|gb|EEO31529.1| dTDP-glucose 4,6-dehydratase [Coprobacillus sp. D7]
Length = 301
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 133/308 (43%), Gaps = 37/308 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+L+ +GG + ++A ++V ++ NR N G
Sbjct: 3 KKILV----TGGTVFVSKFVATYFKNHDYDVYVL---------------NRGNRKQIEGV 43
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY--- 191
K + GD +GN++ G FDVV D V+ + + +GVK ++ ISS+ +Y
Sbjct: 44 KLIKGDRHHLGNLLKGYDFDVVFDVAAYTKQDVKDLLEGL--NGVKDYILISSSAVYPES 101
Query: 192 --KPADEPPHVEGDVVKPDAG--HVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
+P E V + + D G ++ E Y+ + RP Y+ G N E + F
Sbjct: 102 LSQPFKEEQKVGRNSIWGDYGSNKIEAENYLLSHIPQAYILRPPYLYGPMQNVYREPFVF 161
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSML-TLAVENPEAASSNIFNLVSDRAVTLDGM 306
+ ++KR +P G HV DL ++ T+ ++P +I N+ + V ++
Sbjct: 162 ECALKKRSFYLPNDGKMLLQFFHVEDLCKLMETIIKKHPH---DHIMNVGNSEIVDINKF 218
Query: 307 AKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDL 366
+LC Q G+P+ V+ + + F F N ++ + +L S +L E L
Sbjct: 219 VELCYQVVGVPLNKVYVTKHD---NQRDYFSFHNYNYVLDVTKQNQLLP--SQKSLFEGL 273
Query: 367 KERFEEYV 374
+E ++ Y+
Sbjct: 274 EESYQWYL 281
>gi|325663799|ref|ZP_08152200.1| hypothetical protein HMPREF0490_02941 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470132|gb|EGC73366.1| hypothetical protein HMPREF0490_02941 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 303
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 134/309 (43%), Gaps = 38/309 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K++LI +GG + + A+ + G+EV+++ NR + +G
Sbjct: 5 KRILI----TGGTVFVSKFAAEYFVKRGYEVSVL---------------NRGSRPQVSGV 45
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+ + D ++ V+ G FD VLD + V+ + A+ G ++ ISS+ +Y
Sbjct: 46 EWICADRNQLNGVLQGKNFDHVLDITAYTKEDVKNLL--AELKGFSTYILISSSAVYPET 103
Query: 195 DEPPHVEGDVV-------KPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
P E V K + ++ E+Y+ E + RP Y+ GS N+ E + F
Sbjct: 104 LPQPFSEEQPVGYNSIWRKYGSDKIEAEEYLMEKVPDAYVIRPPYLYGSMNDVYREAFVF 163
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE-NPEAASSNIFNLVSDRAVTLDGM 306
D ++ R +PG G Q HV DL ++ +E PE +IFN V + A+ +
Sbjct: 164 DCALQHRKFYMPGDGSQKLQFFHVEDLCRLMEAILEKRPE---EHIFN-VGNEAIDIRTF 219
Query: 307 AKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDL 366
+LC QAAG P+ + + D F F + + + K++L + E L
Sbjct: 220 VELCYQAAGEPLRVRLIGDQFCQTD---YFCFPAYEYVLDVKKQKELLP--DVKDFYEGL 274
Query: 367 KERFEEYVK 375
+E F Y +
Sbjct: 275 REAFAWYCE 283
>gi|331087319|ref|ZP_08336388.1| hypothetical protein HMPREF0987_02691 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330408410|gb|EGG87881.1| hypothetical protein HMPREF0987_02691 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 301
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 134/309 (43%), Gaps = 38/309 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K++LI +GG + + A+ + G+EV+++ NR + +G
Sbjct: 3 KRILI----TGGTVFVSKFAAEYFVKRGYEVSVL---------------NRGSRPQVSGV 43
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+ + D ++ V+ G FD VLD + V+ + A+ G ++ ISS+ +Y
Sbjct: 44 EWICADRNQLNGVLQGKNFDHVLDITAYTKEDVKNLL--AELKGFSTYILISSSAVYPET 101
Query: 195 DEPPHVEGDVV-------KPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
P E V K + ++ E+Y+ E + RP Y+ GS N+ E + F
Sbjct: 102 LPQPFSEEQPVGYNSIWRKYGSDKIEAEEYLMEKVPDAYVIRPPYLYGSMNDVYREAFVF 161
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE-NPEAASSNIFNLVSDRAVTLDGM 306
D ++ R +PG G Q HV DL ++ +E PE +IFN V + A+ +
Sbjct: 162 DCALQHRKFYMPGDGSQKLQFFHVEDLCRLMEAILEKRPE---EHIFN-VGNEAIDIRTF 217
Query: 307 AKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDL 366
+LC QAAG P+ + + D F F + + + K++L + E L
Sbjct: 218 VELCYQAAGEPLRVRLIGDQFCQTD---YFCFPAYEYVLDVKKQKELLP--DVKDFYEGL 272
Query: 367 KERFEEYVK 375
+E F Y +
Sbjct: 273 REAFAWYCE 281
>gi|373111975|ref|ZP_09526210.1| hypothetical protein HMPREF9466_00243 [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
gi|371656543|gb|EHO21868.1| hypothetical protein HMPREF9466_00243 [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
Length = 264
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 118/257 (45%), Gaps = 27/257 (10%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+L++ GG+ +G L + LL GH V + G+ +K + F+ V
Sbjct: 3 KILVM----GGNQFLGKALCESLLTLGHTVFALNRGN------RKNVRDVFHISVDRN-- 50
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
+ ++ + G+ D ++D +G V + + K + KQ+++ISSA IY+
Sbjct: 51 ----EENQLKKALSGLEVDYIVDISGYEPLQVSILLESMKGN-YKQYIYISSASIYQKIQ 105
Query: 196 EPPHVEGDVVKPDA--GHVQVEKYISE-----NFSN--WASFRPQYMIGSGNNKDCEEWF 246
P E D + ++ G K++SE N N + FRP Y+ G GNN D E +
Sbjct: 106 NIPAEEEDKIGENSIWGDYAKNKFLSEQEIPKNIGNAKYTIFRPFYIYGIGNNLDREAYI 165
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
F RI PV +P G + +V DL + + E + IFN+ + V++
Sbjct: 166 FKRIEHNLPVYLPNDGKEKIQFGYVEDLVHAIIYSF-GKEEYYNEIFNVSGEEIVSIKEY 224
Query: 307 AKLCAQAAGLPVEIVHY 323
+LCA+A VEI ++
Sbjct: 225 VELCAKAMKKAVEIRYF 241
>gi|255657560|ref|ZP_05402969.1| hypothetical protein CdifQCD-2_18091 [Clostridium difficile
QCD-23m63]
gi|296452765|ref|ZP_06894454.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Clostridium
difficile NAP08]
gi|296879983|ref|ZP_06903953.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Clostridium
difficile NAP07]
gi|296258384|gb|EFH05290.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Clostridium
difficile NAP08]
gi|296428960|gb|EFH14837.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Clostridium
difficile NAP07]
Length = 312
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 126/276 (45%), Gaps = 24/276 (8%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K +LI+ GG IG LAK L+ G+++ I+T G + D + F + +
Sbjct: 2 KSILIM----GGSDFIGSALAKRLIKCGYQIDILTNGKKEID------YKGFKKHLICDR 51
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K ++ N++ G +D + D + V + D+ +K+++ +S+ +YK +
Sbjct: 52 KV----RKDMENIITGRKYDYIYDMTAYTKEDVSNLIDFISMDSLKKYIVLSAGAVYKDS 107
Query: 195 DEPPHVEGDVVKPDA-GHVQVEKYISENFSN-----WASFRPQYMIGSGNNKDCEEWFFD 248
E + + + G + K +E+F + RP Y+ G NN E +FF+
Sbjct: 108 GRNIKEENEKGENENWGKYGLNKKEAEDFVINSPIPYIIIRPTYIYGENNNLYREYYFFE 167
Query: 249 RIVRKRPVPIPGSGMQFTN-IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
+I + +P+P G Q +N ++ DL +L ++NP + +N+ + + ++ D +
Sbjct: 168 KIEKNEKIPVP-KGKQVSNQFIYIGDLVKVLESIMKNPHVREA--YNVTNPQLISWDDLI 224
Query: 308 KLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 343
C + G I + D + + FPFRN+ F
Sbjct: 225 YTCGEVIGKEPIIKYVDMEKVEFRERTYFPFRNIDF 260
>gi|326793078|ref|YP_004310899.1| NAD-dependent epimerase/dehydratase [Clostridium lentocellum DSM
5427]
gi|326543842|gb|ADZ85701.1| NAD-dependent epimerase/dehydratase [Clostridium lentocellum DSM
5427]
Length = 319
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 146/324 (45%), Gaps = 32/324 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG + LAK ++ GH+V+I T G ++ ++ F K + +E+
Sbjct: 9 GGTEFVSEALAKYMIEKGHQVSIFTRG------VRPVKYSGFTAHYKGNRKCI----SEI 58
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE---PPHVE 201
+ G FD V D + L+ V + +S +K+++F SS +Y P++E +
Sbjct: 59 AFNIEGKAFDYVFDISAYTLEDVTNLFKVLDTSQLKRYIFCSSGAVYIPSEEVMDETFSK 118
Query: 202 GDVV---KPDAGHVQVEKYISENFSN----WASFRPQYMIGSGNNKDCEEWFFDRIVRKR 254
G+ K + +E Y+ E + RP Y+ G GNN E + F +I + +
Sbjct: 119 GENKNWGKYGLDKLAIEDYLFELYQAKGIPVTMLRPTYIYGPGNNLYRESYLFHQISKNQ 178
Query: 255 PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA 314
PV +P G ++ DL + A+ E A ++N+ VT + + A+
Sbjct: 179 PVLVP-EGDTRVQFLYIEDLVKLFEAAM-YEEKAIGQVYNVTHKEQVTYEEWVETAAKVM 236
Query: 315 GLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP-RAAKDILGWRSTTNLPEDLKERFEEY 373
G +I+ G+ ++ FPFR + + + +++L + T L LK+ +E Y
Sbjct: 237 GKQAQIIKLKT-PEGMVSRMYFPFRECTYLLDTSKCDRELL--VAETPLIAGLKKAYEWY 293
Query: 374 VKIGRDKKAMQFEIDDKILESLKV 397
V+ +K + ID+++LE +K+
Sbjct: 294 VE---EKPQV---IDERMLEGIKL 311
>gi|410725913|ref|ZP_11364201.1| nucleoside-diphosphate-sugar epimerase [Clostridium sp. Maddingley
MBC34-26]
gi|410601548|gb|EKQ56056.1| nucleoside-diphosphate-sugar epimerase [Clostridium sp. Maddingley
MBC34-26]
Length = 300
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 122/304 (40%), Gaps = 35/304 (11%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K++L+ +GG + Y+AK +EV ++ G +
Sbjct: 2 KRILV----TGGTVFVSKYVAKYFESKSYEVYVLNRGTKQQ---------------VENV 42
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K + D + + + +FD V+D G N VR + D K ++FISS+ +Y
Sbjct: 43 KLICADRNNLKDCLVKYSFDAVIDVCGYNQKDVRNILD--ALGEFKDYIFISSSAVYPET 100
Query: 195 DEPPHVEGDVV-------KPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
+E P E + K ++ E+Y+ N RP Y+ G N E + F
Sbjct: 101 NEQPFSENQRIGLNSIWSKYGTDKIEAEEYLISRVPNAYILRPPYLYGPMQNLYREAFVF 160
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
+ ++ R IP G HV DL ++ +EN +IFN+ + V ++
Sbjct: 161 ECALKNRKFYIPKDGKMKLQFFHVDDLCKVIEKILEN--HPKEHIFNVGNTEVVDINTFV 218
Query: 308 KLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLK 367
+LC + G P+E V+ + + F F + + + ++L NL LK
Sbjct: 219 ELCYKVVGTPLEKVY---VTNHDNQRDYFSFYDYEYILDVSRQNELLP--EQINLFYGLK 273
Query: 368 ERFE 371
E +E
Sbjct: 274 ESYE 277
>gi|326203132|ref|ZP_08192998.1| NAD-dependent epimerase/dehydratase [Clostridium papyrosolvens DSM
2782]
gi|325986778|gb|EGD47608.1| NAD-dependent epimerase/dehydratase [Clostridium papyrosolvens DSM
2782]
Length = 339
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 141/340 (41%), Gaps = 42/340 (12%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DP 141
GG IG + +LL +T+ + D NS + +G + + G D
Sbjct: 7 GGSKFIGLSIINKLLEMESSITVFNLEDSNS-------------MSVSGVRHIRGNRKDH 53
Query: 142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK--------- 192
A V + FDV++D G + V + + +KQ++F S+ +Y
Sbjct: 54 ALVRKLFEKEQFDVIIDTCGFEPEDVNIFIELF-GNKIKQYIFCSTVSVYDFDKIKSFPI 112
Query: 193 ----PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF-RPQYMIGSGNNKDCEEWFF 247
P P + ++ + EK + N + RP Y+ G D E+FF
Sbjct: 113 KEDFPLKTDPESWNNEIRYGSKKALCEKVLMSNGKFPVTIIRPCYVYGPNAYGDRVEFFF 172
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
+RI +R VPI G ++ DL+ + AV N + A + I+N + + T+
Sbjct: 173 NRIGDERIVPILPIGNNVMQFIYISDLADLFVSAVNN-QKAYNRIYNAAGEESTTIFNFI 231
Query: 308 KLCAQAAGLPVEIVHYD-PKAAGI----DAKKAFPFRNMH--FYAEPRAAKDILGWRSTT 360
LC + G I +D K GI + P + H FY + A L W+ T
Sbjct: 232 NLCEEIIGKKANIRVFDAEKLTGILDEEELAGIIPTKLYHISFYFDNLKAIRDLDWKPKT 291
Query: 361 NLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIP 400
L E LKE ++ + ++++ + + ID+K+L+ L IP
Sbjct: 292 TLYEGLKETYDWH---RQNRREVDYCIDEKLLKLLNGSIP 328
>gi|296242085|ref|YP_003649572.1| NAD-dependent epimerase/dehydratase [Thermosphaera aggregans DSM
11486]
gi|296094669|gb|ADG90620.1| NAD-dependent epimerase/dehydratase [Thermosphaera aggregans DSM
11486]
Length = 335
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 105/252 (41%), Gaps = 39/252 (15%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP-----DAGHVQV--E 215
N+DA + +A+ A GVK+F++ SS P D PP GD P D G ++ E
Sbjct: 90 NVDATKILAEQALKHGVKRFIYCSSTEAIGPVDNPP---GDEETPPNPQFDYGRSKLLAE 146
Query: 216 KYISENFSNWASF---RPQYMIGSGNNKDCEEWFFDRIVR-----KRPVPIPGSGMQFTN 267
+ I E +N S+ RP + G GN D WF + K + GSG
Sbjct: 147 QKIKEIAANGLSYTIIRPSGLYGPGNVNDVSYWFITSFAKGGFFSKFKI---GSGETLIQ 203
Query: 268 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 327
AHV D++ L VE E + + +F L DRA T + + K+ ++ G P PK
Sbjct: 204 FAHVDDVAKGFALVVERLEKSENQVFILSEDRAYTYNEVYKILSEITGNPPPKYSLSPKM 263
Query: 328 AGIDAKKAFPF------------RNM------HFYAEPRAAKDILGWRSTTNLPEDLKER 369
A + + RN+ H AK +LG+ NL E LKE
Sbjct: 264 AKLILSFTHLYALVKGDNNILLRRNIVDSIAKHRAYSVEKAKRLLGYSPRYNLKEGLKET 323
Query: 370 FEEYVKIGRDKK 381
E Y G KK
Sbjct: 324 IEWYRLKGYIKK 335
>gi|116620378|ref|YP_822534.1| NAD-dependent epimerase/dehydratase [Candidatus Solibacter usitatus
Ellin6076]
gi|116223540|gb|ABJ82249.1| NAD-dependent epimerase/dehydratase [Candidatus Solibacter usitatus
Ellin6076]
Length = 332
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 139/349 (39%), Gaps = 61/349 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVL++ GG IG L +ELL GHEV ++ + K F R E + A
Sbjct: 2 KVLVI----GGTLFIGKALVEELLKEGHEVAVL-------HRKPKHDFGRRVENIMADRN 50
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQ-------------- 181
GD + G FDVV DN V DW + + Q
Sbjct: 51 N--GDAMR--EALAGRRFDVVFDN----------VYDWERGTTAAQVEATIRACGDRLSR 96
Query: 182 FLFISSAGIYKPADEPPHVEGDVVKPD-------AGHVQVEKYISENFSN----WASFRP 230
++F+SS Y D H E D + PD + E+ + + +FRP
Sbjct: 97 YIFMSSVAAY--GDGLNHKESDPLAPDYHPIPYTSHKATTERMLFRMHATSGLPVVTFRP 154
Query: 231 QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
++ G N E++F+DR+ RP+ IPG G + +V DL + + A++ P A
Sbjct: 155 PFVYGPRTNYYREQFFWDRLRAGRPIIIPGDGHRLMQFVYVNDLVTAMVKAMDEPRAVGE 214
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF--PFRNMHFYAEPR 348
FN+ + VT + + A+ A + +V F P +Y P
Sbjct: 215 -AFNIGDPKPVTQVELVEKLAKVANVEPALVRVPRDVITQAGGNVFNEPLYFGEYYDLPP 273
Query: 349 AAKDI-----LGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 392
++I + T LKE ++ YV+ + + A FE DDK+L
Sbjct: 274 ITENIGKVTRVLKMKLTPFETGLKETYKWYVRNHKARTA-GFEFDDKVL 321
>gi|373857922|ref|ZP_09600661.1| NAD-dependent epimerase/dehydratase [Bacillus sp. 1NLA3E]
gi|372452144|gb|EHP25616.1| NAD-dependent epimerase/dehydratase [Bacillus sp. 1NLA3E]
Length = 326
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 135/314 (42%), Gaps = 29/314 (9%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK L++ GG +G + K L+ G++V +T G +KK +N+
Sbjct: 2 KKALVM----GGTEFVGMAILKGLISKGYQVDFLTRG------IKKVFIQGYNKHYICDR 51
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K + E+ + G+ +D + D + + V + K S + ++ F+SS +Y +
Sbjct: 52 K----NENEIKKCLSGIEYDYIFDISAYSRKDVEILLKSVKLSRITRYCFLSSGAVYTMS 107
Query: 195 DEPPHVEGDV-VKPDAGHVQVEKYISENF------SN---WASFRPQYMIGSGNNKDCEE 244
+ + P+ G ++K +E++ SN FRP Y+ G GNN E
Sbjct: 108 KNYLYENSERGTNPNWGMYGLDKKEAEDYLFNLSKSNGFPMVIFRPSYIYGEGNNLYRES 167
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
+FF RI+ +P+PIP +G + T H+ D+ ++ ++ N + +NL
Sbjct: 168 YFFHRILNNQPIPIPNTGKK-TQFIHINDVVDIILDSITNDKTVGE-AYNLTHPSEFEWI 225
Query: 305 GMAKLCAQAAGLPVEIV---HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTN 361
++ + I+ D I ++ FPFR++ + + K+ N
Sbjct: 226 EFVEIIQKIVSKQTTILSVSQEDMNNLNITPRQFFPFRDITYLMDINKLKEHNLILPRIN 285
Query: 362 LPEDLKERFEEYVK 375
+ E L+ F+ +++
Sbjct: 286 IEEGLQASFDWFLQ 299
>gi|163816636|ref|ZP_02207999.1| hypothetical protein COPEUT_02826 [Coprococcus eutactus ATCC 27759]
gi|158447893|gb|EDP24888.1| NAD dependent epimerase/dehydratase family protein [Coprococcus
eutactus ATCC 27759]
Length = 300
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 130/308 (42%), Gaps = 35/308 (11%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+LI +GG + Y A+ + G+EV ++ NR + G
Sbjct: 2 KKILI----TGGTVFVSRYAARYFVDKGYEVYVV---------------NRNSRPQVPGA 42
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K + D ++G+ + + FDVV D N + + + D S G Q++ ISS+ +Y
Sbjct: 43 KLIEADRHDLGDKLKDIYFDVVADITAYNAEDITDLCDSLGSFG--QYIMISSSAVYPEY 100
Query: 195 DEPPHVEGD--VVKPDAGHVQVEKYISEN-----FSNWASFRPQYMIGSGNNKDCEEWFF 247
+ P E + G +K +E+ S+ RP Y+ G NN E + F
Sbjct: 101 GDQPFREDSERALNRYWGSYGTDKIAAEDALLDRVSDAYILRPPYIYGPMNNVYREAFVF 160
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
D RP +PG G HV+DL ++ +E E ++I N+ + VT+
Sbjct: 161 DCARADRPFYLPGDGGMKLQFFHVKDLCILMERVIE--EKLETHIMNVGNVEPVTIKDWV 218
Query: 308 KLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLK 367
+C +I + + I+ + F F N +Y + + I + T +L + LK
Sbjct: 219 TMCYACFD---KIPAFVNVSEDIEQRNYFSFYNYEYYLDVQQQNKI--YPETISLEDGLK 273
Query: 368 ERFEEYVK 375
E E YV+
Sbjct: 274 ECAEWYVE 281
>gi|336429706|ref|ZP_08609666.1| hypothetical protein HMPREF0994_05672 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336002036|gb|EGN32161.1| hypothetical protein HMPREF0994_05672 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 344
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 132/312 (42%), Gaps = 39/312 (12%)
Query: 71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV 130
A K K+LI +GG + + A G GHEV ++ NR
Sbjct: 42 AQNKMKLLI----TGGTVFVSKFTAAYFAGRGHEVYVL---------------NRGTRPQ 82
Query: 131 SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK--QFLFISSA 188
+ G + D +G+ + G+ FD V+D + + + +G+K ++ ISS+
Sbjct: 83 AEGVNLIKADRNSLGSALNGMYFDAVIDVCAYKEADINNLLN----AGIKFDDYVLISSS 138
Query: 189 GIY-----KPADEPPHVEGDVVKPD--AGHVQVEKYISENFSNWASFRPQYMIGSGNNKD 241
+Y +P +E + + + D +G V E ++ + N RP Y+ G N
Sbjct: 139 AVYPETLPQPFNERQPIGKNSIWGDYSSGKVGAEVCLTSRYPNAYVIRPPYLYGPMQNLY 198
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
E + F+ KR IPG G HV DL + + + E ++IFN+ + + V
Sbjct: 199 REPFVFECADLKRKFYIPGDGEMKLLFFHVEDLCRFIYIILR--EHPDNHIFNVGNTQPV 256
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTN 361
++ A+LC +AAG P+E V + + F F N + + +I+ +
Sbjct: 257 SISTFAELCYRAAGAPLEKVFVKDHP---NQRDYFSFHNYEYLLDVSLQNEIMP--EQKD 311
Query: 362 LPEDLKERFEEY 373
L LKE +E Y
Sbjct: 312 LYCGLKESYEWY 323
>gi|381181099|ref|ZP_09889935.1| NAD-dependent epimerase/dehydratase [Treponema saccharophilum DSM
2985]
gi|380767104|gb|EIC01107.1| NAD-dependent epimerase/dehydratase [Treponema saccharophilum DSM
2985]
Length = 301
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 139/314 (44%), Gaps = 37/314 (11%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+L+ +GG + Y+A E + +E + + NR N A
Sbjct: 2 KKLLV----TGGTVFVSKYVA-EYFSNKNEYEVFVL-------------NRNNHPQPANT 43
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K + D ++ + + FD+VLD N + V+ + + V ++F+SS+ +Y
Sbjct: 44 KLINLDRKDLQDKLKKYNFDIVLDITSYNKNDVQGI--YESVGDVPDYIFLSSSAVYPET 101
Query: 195 DEPPHVEGDVVK-----PDAG--HVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
+E P +E V D G ++ E+Y+ + RP Y+ G NN E + F
Sbjct: 102 EEQPFMENVKVGFNKFWKDYGMNKIEAEEYLRSVKPDSYIIRPPYLYGPENNVYREAFVF 161
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE-NPEAASSNIFNLVSDRAVTLDGM 306
+ RP IP +G ++ DL ++ ++ +PE IFN+ ++ +V++
Sbjct: 162 ECAENNRPFYIPSNGDMKLQFFYIEDLCKIIEKIIKTHPEEK---IFNVGNEESVSIKEW 218
Query: 307 AKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDL 366
KLC + G V + + + I+ + F F N + + K +L + +TNL E L
Sbjct: 219 VKLCYEVVGKDVIFKNVNEE---IEQRNYFSFYNYEYKLDITRQKSLL--KESTNLREGL 273
Query: 367 KERFEEYVKIGRDK 380
+E + Y K +DK
Sbjct: 274 RESYCWY-KNNKDK 286
>gi|395007244|ref|ZP_10391006.1| nucleoside-diphosphate-sugar epimerase [Acidovorax sp. CF316]
gi|394314733|gb|EJE51600.1| nucleoside-diphosphate-sugar epimerase [Acidovorax sp. CF316]
Length = 315
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 128/318 (40%), Gaps = 52/318 (16%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
+KVL++ GG +G L + L+ G +VT +T G SD
Sbjct: 2 QKVLLL----GGSVFVGRALLQRLIAQGFDVTAVTRGLVQSD------------------ 39
Query: 135 KTVWG----------DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
WG D ++ + + G TFD V+D + + R + + ++
Sbjct: 40 ---WGAAHHIACDRRDAHQLASRLRGHTFDAVVDASCYGPEDCRALLAGLHAMPTT-YVL 95
Query: 185 ISSAGIYKPADEP-PHVEGDVVKPDA--GHVQVEKYISENFSNWASF------RPQYMIG 235
+SSA +Y+ + P P E D G +K +E +S RP Y+ G
Sbjct: 96 LSSAAVYERSTAPLPFSEASPAHGDGIWGTYGRDKAAAETVLCASSIPRQFVVRPPYIYG 155
Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
GNN D E + + R + + P+ +P G + DL+ + ++ A + I+NL
Sbjct: 156 PGNNLDRERFVWARQLAQAPIFVPADGETLIQFVGIDDLTRAIVGFLDPQCAVAPGIYNL 215
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILG 355
S V+ + L Q AG +VH I A++ FPFR H + + +
Sbjct: 216 ASPTYVSFNQYIALLGQIAGRQSHVVHVSDST--IPAREYFPFRKAHLIL---STQKLAT 270
Query: 356 W--RSTTNLPEDLKERFE 371
W R T L E L+ F+
Sbjct: 271 WSERPQTPLVEGLQAAFD 288
>gi|448549969|ref|ZP_21628574.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax sp. ATCC BAA-645]
gi|448559677|ref|ZP_21633751.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax sp. ATCC BAA-644]
gi|445711067|gb|ELZ62862.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax sp. ATCC BAA-644]
gi|445713017|gb|ELZ64798.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax sp. ATCC BAA-645]
Length = 329
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 126/299 (42%), Gaps = 41/299 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L ELL SG+ VTI G+ ++ PF + G +
Sbjct: 8 GGTRFIGRHLVSELLDSGYAVTIFNRGNHDN------PFEGDPRVQHVQGDRTDDEALRT 61
Query: 145 G--NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
V FD V + AV AD V +++ISS Y A+ P EG
Sbjct: 62 AKLTVEPDAVFDCVAYTPAEVASAVDIFAD------VDAYVYISSGAAYG-AEVIPKREG 114
Query: 203 DVVKPDAGHVQV---------------EKYISENFS---NWASFRPQYMIGSGNNKDCEE 244
+ D Q ++ + E S N S RP + G + + +
Sbjct: 115 ETPLCDCTDEQATDDSDASYGPRKAEGDRVVFEAASRGINAMSVRPCIVYGPEDYTERLD 174
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
++ DR++ V +PG G + A+V D++S + + E EA + +N+ R VTL+
Sbjct: 175 YWIDRVLNYDRVVVPGDGTNVWHRAYVEDVASAMRVVAEEGEAGEA--YNVGDRRLVTLE 232
Query: 305 GMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNM-HFYAEPRAAKDILGWRST 359
M ++ A AAG VE+VH + AAG+ +R+ H + + A+ LGW ST
Sbjct: 233 EMVEVIADAAGTDVEVVHAGERELAAAGLSMDDFILYRDYPHVLSTDKLAR--LGWEST 289
>gi|448542572|ref|ZP_21624734.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein,
partial [Haloferax sp. ATCC BAA-646]
gi|445707051|gb|ELZ58917.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein,
partial [Haloferax sp. ATCC BAA-646]
Length = 300
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 127/303 (41%), Gaps = 49/303 (16%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF------NEIVSAGGKTVW 138
GG IG +L ELL SG+ VTI G+ ++ P +E + TV
Sbjct: 8 GGTRFIGRHLVSELLDSGYAVTIFNRGNHDNPFEGDPRVQHVQGDRTDDEALRTAKLTVE 67
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
D FD V + AV AD V +++ISS Y A+ P
Sbjct: 68 PD----------AVFDCVAYTPAEVASAVDIFAD------VDAYVYISSGAAYG-AEVIP 110
Query: 199 HVEGDVVKPDAGHVQV---------------EKYISENFS---NWASFRPQYMIGSGNNK 240
EG+ D Q ++ + E S N S RP + G +
Sbjct: 111 KREGETPLCDCTDEQATDDSDASYGPRKAEGDRVVFEAASRGINAMSVRPCIVYGPEDYT 170
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
+ +++ DR++ V +PG G + A+V D++S + + E EA + +N+ R
Sbjct: 171 ERLDYWIDRVLNYDRVVVPGDGTNVWHRAYVEDVASAMRVVAEEGEAGEA--YNVGDRRL 228
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNM-HFYAEPRAAKDILGW 356
VTL+ M ++ A AAG VE+VH + AAG+ +R+ H + + A+ LGW
Sbjct: 229 VTLEEMVEVIADAAGTDVEVVHAGERELAAAGLSMDDFILYRDYPHVLSTDKLAR--LGW 286
Query: 357 RST 359
ST
Sbjct: 287 EST 289
>gi|376004404|ref|ZP_09782113.1| mRNA-binding protein (fragment) [Arthrospira sp. PCC 8005]
gi|375327218|emb|CCE17866.1| mRNA-binding protein (fragment) [Arthrospira sp. PCC 8005]
Length = 108
Score = 73.2 bits (178), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPR 348
++N+ DR VT DG+AK CA AAG ++++HYDPK +KAFP R HF+A+
Sbjct: 1 MYNISGDRFVTFDGLAKACAIAAGESPDDLQLIHYDPKNFDFGKRKAFPLRVQHFFADVH 60
Query: 349 AAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILES 394
A + L W+ +L LK+ + ++ + F DD+I+++
Sbjct: 61 KAINQLNWQPKYDLISGLKDSCQNDYLANSNQGEVDFSTDDEIIKA 106
>gi|448625257|ref|ZP_21671024.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax denitrificans ATCC 35960]
gi|445749019|gb|EMA00465.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax denitrificans ATCC 35960]
Length = 329
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 125/299 (41%), Gaps = 41/299 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L ELL SG+ VTI G+ ++ PF + G +
Sbjct: 8 GGTRFIGRHLVSELLDSGYAVTIFNRGNHDN------PFEDDPRVQHVQGDRTDDEALRT 61
Query: 145 G--NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
V FD V + AV AD V +++ISS Y A+ P EG
Sbjct: 62 AKLTVEPDAVFDCVAYKPAEVASAVDIFAD------VDAYVYISSGAAYG-AEVIPKREG 114
Query: 203 DVVKPDAGHVQV---------------EKYISENFS---NWASFRPQYMIGSGNNKDCEE 244
+ D Q ++ + E S N S RP + G + + +
Sbjct: 115 ETPLCDCTDEQATDDSGASYGPRKAEGDRVVFEAASRGINAMSVRPCIVYGPEDYTERLD 174
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
++ DR++ V +PG G + A+V D++S + + E EA + +N+ R VTL+
Sbjct: 175 YWIDRVLNYDRVVVPGDGTNVWHRAYVEDVASAMRVVAEEGEAGEA--YNVGDRRLVTLE 232
Query: 305 GMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNM-HFYAEPRAAKDILGWRST 359
M ++ A AAG VE+VH + AA + +R+ H A + A+ LGW ST
Sbjct: 233 EMVEVIADAAGTDVEVVHAGERELAAADLSMDDFVLYRDYPHVLATDKLAR--LGWEST 289
>gi|289582190|ref|YP_003480656.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099]
gi|448282394|ref|ZP_21473681.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099]
gi|289531743|gb|ADD06094.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099]
gi|445576454|gb|ELY30909.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099]
Length = 328
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 132/321 (41%), Gaps = 43/321 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEIVSAGGKTVWG 139
GG IG +L ELL ++VT++ G + D++ +R N+ T+
Sbjct: 8 GGTRFIGRHLVSELLEHDYDVTLLNRGTRENPFADDDRVDHIEGDRTNDSALEAAATI-- 65
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP-- 197
DP V + V DV A R AD + +++ISS Y + P
Sbjct: 66 DPDAVFDCVAYYPKDVQA--------ATRIFAD------CEAYVYISSGAAYGREEIPKR 111
Query: 198 ----------PHVEGDVVKPDAGHVQVE-----KYISENFSNWASFRPQYMIGSGNNKDC 242
P D G + E + + N S RP + G + +
Sbjct: 112 ENETPLESCSPEEATDDSDATYGKRKAEGDRAIEAAANRGVNAMSVRPCIVYGPDDYTER 171
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
+++ DR+ + V +PG G + A V D++S L + E+ EA + +N+ R VT
Sbjct: 172 LDFWIDRVNQHDRVVVPGDGTNVWHRAFVDDVASALRIVAEHGEAGEA--YNVGDQRLVT 229
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
LD M L A A V+IVH P+ AAG +P + + A LGW ST
Sbjct: 230 LDEMVDLIADALDTTVDIVHAGPRELAAGEIDPTDYPLYREYPHVLSTAKLTALGWESTP 289
Query: 361 NLPEDLKERFEEYVKIGRDKK 381
L +++ E++++ RD +
Sbjct: 290 -LESAMEQSVEDHLESDRDGR 309
>gi|448582063|ref|ZP_21645567.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax gibbonsii ATCC 33959]
gi|445731711|gb|ELZ83294.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax gibbonsii ATCC 33959]
Length = 329
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 133/302 (44%), Gaps = 47/302 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGD-----ENSDKMKKPPFNRFN-EIVSAGGKTVW 138
GG IG +L ELL SG+ VTI G+ E+ +++ +R + E + TV
Sbjct: 8 GGTRFIGRHLVSELLDSGYAVTIFNRGNHDNPFEDDPRVQHVQGDRTDDEALRTAKLTV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY------K 192
DP V FD V + AV AD V +++ISS Y K
Sbjct: 67 -DPDAV--------FDCVAYKPAEVASAVDIFAD------VDAYVYISSGAAYGSEVIPK 111
Query: 193 PADEPPHVE--GDVVKPDAG------HVQVEKYISENFS---NWASFRPQYMIGSGNNKD 241
+E P + + D+G + ++ + E S N S RP + G + +
Sbjct: 112 RENETPLCDCTDEQAADDSGASYGPRKAEGDRVVFEAASRGINAMSVRPCIVYGPEDYTE 171
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR++ V +PG G + A+V D++S + + E EA + +N+ R V
Sbjct: 172 RLDYWIDRVLNYDRVVVPGDGTNVWHRAYVEDVASAMRVVAEEGEAGEA--YNVGDRRLV 229
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNM-HFYAEPRAAKDILGWR 357
TL+ M ++ A AAG VE+VH + A + +R+ H A + A+ LGW
Sbjct: 230 TLEEMVQVIADAAGTDVEVVHAGERELAATDLSMDDFILYRDYPHVLATDKLAR--LGWE 287
Query: 358 ST 359
ST
Sbjct: 288 ST 289
>gi|448574883|ref|ZP_21641406.1| NAD-dependent epimerase/dehydratase [Haloferax larsenii JCM 13917]
gi|445732562|gb|ELZ84144.1| NAD-dependent epimerase/dehydratase [Haloferax larsenii JCM 13917]
Length = 329
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 131/323 (40%), Gaps = 50/323 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF------NEIVSAGGKTVW 138
GG IG +L +LL +G++VT+ G+ ++ P +E + T
Sbjct: 8 GGTRFIGRHLVSDLLDNGYDVTLFNRGNHDNPFADDPRVQHMQGDRADDEALRTAKLT-- 65
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
DP V FD V + AV AD V +++ISS Y +E P
Sbjct: 66 ADPDAV--------FDCVAYKPSEVASAVDIFAD------VDAYVYISSGAAYG-REEIP 110
Query: 199 HVEGDVVKPDAGHVQVEKYISENFS------------------NWASFRPQYMIGSGNNK 240
EG D Q E++ N S RP + G +
Sbjct: 111 KREGVTPLCDCTDEQARDDSPESYGPRKAEGDRVVFEAASRGINAMSVRPCIVYGPHDYT 170
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
+ +++ DR++ V +PG G + A+V D++S + + E EA + +N+ R
Sbjct: 171 ERLDYWIDRVLNHDRVVVPGDGTNVWHRAYVEDVASAMRVVAEEGEAGEA--YNVGDRRL 228
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNM-HFYAEPRAAKDILGW 356
VTL+ M ++ A AG VE+VH + A G+D +R H A + A LGW
Sbjct: 229 VTLEEMVEVIADVAGTNVEVVHAGERELAAGGLDPTDFVLYREYPHVLATNKLAS--LGW 286
Query: 357 RSTTNLPEDLKERFEEYVKIGRD 379
ST + E ++ E + RD
Sbjct: 287 ESTP-VEEAMRRSVESHRDSDRD 308
>gi|292655031|ref|YP_003534928.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax volcanii DS2]
gi|448292667|ref|ZP_21483073.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax volcanii DS2]
gi|291370200|gb|ADE02427.1| 3-beta hydroxysteroid dehydrogenase/isomerase family superfamily
[Haloferax volcanii DS2]
gi|445572423|gb|ELY26963.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax volcanii DS2]
Length = 329
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 122/306 (39%), Gaps = 57/306 (18%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L ELL SG+ VTI G+ ++ PF + G +
Sbjct: 8 GGTRFIGRHLVSELLDSGYAVTIFNRGNHDN------PFEDDPRVQHVQGDRTDDEALRT 61
Query: 145 G--NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY------KPADE 196
V FD V + AV AD V +++ISS Y K DE
Sbjct: 62 AKLTVAPDAVFDCVAYKPAEVASAVDVFAD------VDAYVYISSGAAYGSEVIPKREDE 115
Query: 197 --------------------PPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS 236
P EGD V +A + N S RP + G
Sbjct: 116 TLLCDCTDEQAADDSGASYGPRKAEGDRVVFEAASRGI---------NAMSVRPCIVYGP 166
Query: 237 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
+ + +++ DR++ V +PG G + A+V D++S + + E EA + +N+
Sbjct: 167 DDYTERLDYWIDRVLNYDRVVVPGDGTNVWHRAYVEDVASAMRVVAEEGEAGEA--YNVG 224
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNM-HFYAEPRAAKD 352
R VTL+ M + A AAG VE+VH + AAG+ +R+ H + + A+
Sbjct: 225 DRRLVTLEEMVEAIADAAGTDVEVVHAGERELAAAGLSMDDFILYRDYPHVLSTDKLAR- 283
Query: 353 ILGWRS 358
LGW S
Sbjct: 284 -LGWES 288
>gi|448355174|ref|ZP_21543927.1| NAD-dependent epimerase/dehydratase [Natrialba hulunbeirensis JCM
10989]
gi|445635939|gb|ELY89104.1| NAD-dependent epimerase/dehydratase [Natrialba hulunbeirensis JCM
10989]
Length = 329
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 135/322 (41%), Gaps = 44/322 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNE-IVSAGGKTVW 138
GG IG +L +LL ++VT++ G + D++ +R N+ + A T+
Sbjct: 8 GGTRFIGRHLVSDLLEHDYDVTLLNRGTRENPFADDDRVDHIEGDRTNDSALEAAAATI- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP- 197
DP V + V DV A R AD + +++ISS Y + P
Sbjct: 67 -DPDAVFDCVAYYPKDVQA--------ATRIFAD------CEAYVYISSGAAYGREEIPK 111
Query: 198 -----------PHVEGDVVKPDAGHVQVE-----KYISENFSNWASFRPQYMIGSGNNKD 241
P D G + E + ++ N S RP + G + +
Sbjct: 112 RENETPLESCSPEAATDDSDATYGKRKAEGDRAIEAAADRGVNAMSVRPCIVYGPDDYTE 171
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR+ + V +PG G + A V D++S L + E EA + +N+ + V
Sbjct: 172 RLDFWIDRVNQHDRVVVPGDGTNVWHRAFVDDVASALRIVAERGEAGEA--YNVGDRQLV 229
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRST 359
TLD M L A A G V++VH P+ AAG +P + + A LGW ST
Sbjct: 230 TLDEMVDLIADALGTTVDVVHAGPRELAAGEIDPTDYPLYREYPHVLSTAKLAALGWEST 289
Query: 360 TNLPEDLKERFEEYVKIGRDKK 381
L +++ E++++ RD +
Sbjct: 290 A-LESAMEQSVEDHLESDRDGR 310
>gi|448299940|ref|ZP_21489946.1| NAD-dependent epimerase/dehydratase [Natronorubrum tibetense GA33]
gi|445586800|gb|ELY41073.1| NAD-dependent epimerase/dehydratase [Natronorubrum tibetense GA33]
Length = 329
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 129/305 (42%), Gaps = 53/305 (17%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGD-----ENSDKMKKPPFNRFNE-IVSAGGKTVW 138
GG IG +L ++LL G++VTI+ G+ E +D++++ +R N+ ++ A TV
Sbjct: 8 GGTRFIGRHLVEDLLEHGYDVTILNRGNHENPFEGNDRVERVEGDRTNDSVLEAAASTV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGV----KQFLFISSAGIYKPA 194
DP V FD V A P D ++G+ + +++ISS Y +
Sbjct: 67 -DPDAV--------FDCV---------AYYP-KDVRAATGIFADCEAYVYISSGAAYG-S 106
Query: 195 DEPPHVEGDVVKPDAGHVQVEKYISENFSNWA------------------SFRPQYMIGS 236
+E P EG+ Q E + N S RP + G
Sbjct: 107 EEIPKREGETALEACTSEQAVDEDGETYGNRKAEGDRAVVAAADEGVRAMSVRPCIVYGP 166
Query: 237 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
+ + +W+ DR+ R V +PG G + A+V D++S L E E + +N+
Sbjct: 167 HDYTERLDWWIDRVNRFDRVVVPGDGTNVWHRAYVEDVASALRTVAE--EGTAGEAYNVG 224
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPFRNMHFYAEPRAAKDIL 354
R VTL+ M +L A VE+V + AAG A + + + + A L
Sbjct: 225 DRRLVTLEEMVELIAAELDADVEVVTAGARELAAGDIASEDYLIYREYPHVLSTAKLAAL 284
Query: 355 GWRST 359
GW ST
Sbjct: 285 GWEST 289
>gi|448590201|ref|ZP_21650169.1| NAD-dependent epimerase/dehydratase [Haloferax elongans ATCC
BAA-1513]
gi|445734991|gb|ELZ86545.1| NAD-dependent epimerase/dehydratase [Haloferax elongans ATCC
BAA-1513]
Length = 329
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 129/323 (39%), Gaps = 50/323 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF------NEIVSAGGKTVW 138
GG IG +L +LL G++VTI G+ ++ P +E + TV
Sbjct: 8 GGTRFIGRHLVSDLLDHGYDVTIFNRGNHDNPFADNPRVQHMQGDRADDEALRTAKLTVE 67
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
D FD V N + AV AD V +++ISS Y + P
Sbjct: 68 PD----------AVFDCVAYNPSEVASAVDIFAD------VDAYVYISSGAAYG-REAIP 110
Query: 199 HVEGDVVKPDAGHVQVEKYISENFS------------------NWASFRPQYMIGSGNNK 240
EG D Q E++ N S RP + G +
Sbjct: 111 KREGVTPLCDCTDEQASDDSPESYGPRKAEGDRVVFEAASRGINAMSIRPCIVYGPHDYT 170
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
+ +++ DR++ V +PG G + A+V D++S + + E EA + +N+ +
Sbjct: 171 ERLDYWIDRVLNYDRVVVPGDGTNVWHRAYVEDVASAMRVIAEEGEAGEA--YNVGDRQL 228
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNM-HFYAEPRAAKDILGW 356
VTL+ M ++ A AG VE+VH + A G+D +R H A + A LGW
Sbjct: 229 VTLEEMVEVIADVAGTDVEVVHAGERELAAGGLDPTDFILYREYPHVLATNKLAS--LGW 286
Query: 357 RSTTNLPEDLKERFEEYVKIGRD 379
ST + E ++ E + RD
Sbjct: 287 ESTP-VEEAMRRSVESHRDSDRD 308
>gi|389846311|ref|YP_006348550.1| NAD-dependent epimerase/dehydratase [Haloferax mediterranei ATCC
33500]
gi|448616069|ref|ZP_21664779.1| NAD-dependent epimerase/dehydratase [Haloferax mediterranei ATCC
33500]
gi|388243617|gb|AFK18563.1| NAD-dependent epimerase/dehydratase [Haloferax mediterranei ATCC
33500]
gi|445750724|gb|EMA02161.1| NAD-dependent epimerase/dehydratase [Haloferax mediterranei ATCC
33500]
Length = 329
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 134/323 (41%), Gaps = 50/323 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF------NEIVSAGGKTVW 138
GG IG +L +LL +G+ VT+ G+ ++ P +E + TV
Sbjct: 8 GGTRFIGRHLVSDLLDNGYAVTLFNRGNHDNPFEDDPRVQHIQGDRTDDEALRTAKLTV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
DP V FD V G+ AV AD V +++ISS Y+ + P
Sbjct: 67 -DPDAV--------FDCVAYKPGEVASAVDIFAD------VDAYVYISSGAAYE-TEAIP 110
Query: 199 HVEGDVVKPDAGHVQVEKYISENFS------------------NWASFRPQYMIGSGNNK 240
EG D Q E++ N S RP + G +
Sbjct: 111 KREGVTELCDCTDEQATGDTPESYGPRKAEGDRVVFEAASRGINAMSIRPCIVYGPHDYT 170
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
+ +++ DR++ + +PG G + A+V D++S + + E E + +N+ R
Sbjct: 171 ERLDYWIDRVLNYDRIVVPGDGTNIWHRAYVEDVASAMRVIAEEGEPGEA--YNVGDRRL 228
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNM-HFYAEPRAAKDILGW 356
VTL+ M ++ A AAG VE+VH + AA ++ +R H + + A+ LGW
Sbjct: 229 VTLEEMVEVIADAAGTDVEVVHAGERELAAANLELTDFVLYREYPHVLSTNKLAR--LGW 286
Query: 357 RSTTNLPEDLKERFEEYVKIGRD 379
ST + E ++ E++ RD
Sbjct: 287 ESTP-VDEAMRRSVEDHRDSDRD 308
>gi|448694126|ref|ZP_21696947.1| NAD-dependent epimerase/dehydratase [Halobiforma lacisalsi AJ5]
gi|445785615|gb|EMA36402.1| NAD-dependent epimerase/dehydratase [Halobiforma lacisalsi AJ5]
Length = 331
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 139/326 (42%), Gaps = 50/326 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNE-IVSAGGKTVW 138
GG IG +L ELL +EVT+ G+ + D++ +R ++ + A G+ V
Sbjct: 8 GGTRFIGRHLVDELLAHDYEVTLFNRGNHENPFADDDRVDHVEGDRTDDDALEAAGREV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY------K 192
DP V + V DV A R AD + ++++SS Y K
Sbjct: 67 -DPDAVFDCVAYYPDDVRT--------ATRIFAD------CEAYVYVSSGAAYGREDIPK 111
Query: 193 PADEPPHVE------GDVVKPDAGHVQVEK-----YISENFSNWASFRPQYMIGSGNNKD 241
DE P E D G+ + E +EN N S RP + G + +
Sbjct: 112 REDETPLAECTAEQATDDSHATYGNRKAEGDRAVFEAAENGVNAMSLRPPIVYGPHDYTE 171
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR+ R V IPG G + +V D++S L + E E + +N R V
Sbjct: 172 RLDFWIDRVNRFDRVVIPGDGTNLWHRVYVEDVASALRIVAERGEPGEA--YNTGDRRLV 229
Query: 302 TLDGMAKLCAQA--AGLPVEIVHYDPK---AAGIDAKKAFPFRNM-HFYAEPRAAKDILG 355
T++ M +L A + VE+VH P+ A GI+ + +R H A + A LG
Sbjct: 230 TIEEMVELIADQVDSTADVEVVHAGPRELAAGGIELEDYPLYREYPHVMATNKLAD--LG 287
Query: 356 WRSTTNLPEDLKERFEEYVKIGRDKK 381
W ST L E + E++++ RD +
Sbjct: 288 WESTP-LEEAMARAVEDHLESDRDGR 312
>gi|293115818|ref|ZP_05793133.2| putative dTDP-glucose 4,6-dehydratase [Butyrivibrio crossotus DSM
2876]
gi|292808328|gb|EFF67533.1| putative dTDP-glucose 4,6-dehydratase [Butyrivibrio crossotus DSM
2876]
Length = 316
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 133/322 (41%), Gaps = 45/322 (13%)
Query: 65 FTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN 124
F VK + KK+L+ +GG + Y+A+ + G+EV ++ N
Sbjct: 8 FCVKENFM--KKILV----TGGTTFVSKYVAEYFVNVGYEVFVL---------------N 46
Query: 125 RFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLD----NNGKNLDAVRPVADWAKSSGVK 180
R ++ G K + GD +G V+ FDVV D N+ +D VR + +
Sbjct: 47 RNSKPQVQGVKLIEGDRHNLGGVLKDTFFDVVADITAYNDNDIIDFVRELGSF------D 100
Query: 181 QFLFISSAGIYKPADEPPHVEGDVVKPD-------AGHVQVEKYISENFSNWASFRPQYM 233
Q++ ISS+ +Y P +E + + EK + E + RP Y+
Sbjct: 101 QYIMISSSAVYPEYGVQPFLEESEKSENKFWGSYGTDKIAAEKALLERVKDAYILRPPYL 160
Query: 234 IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
G NN E + FD + R +P G HV+DL ++ + ++ + I
Sbjct: 161 YGPMNNVYREAFVFDCALADRKFYLPKDGSMKLQFFHVKDLCRLMEVIIK--DKPQERIL 218
Query: 294 NLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI 353
N+ + AV++ C ++ G + V+ I+ + F F N +Y + I
Sbjct: 219 NVGNVEAVSIKDWVTKCYESLGKIPDFVN---VYEDIEQRNYFSFYNYEYYLDVSRQNKI 275
Query: 354 LGWRSTTNLPEDLKERFEEYVK 375
+ T +L + L++ + Y++
Sbjct: 276 --YPETISLEDGLRDSVKWYLE 295
>gi|448613288|ref|ZP_21663168.1| NAD-dependent epimerase/dehydratase [Haloferax mucosum ATCC
BAA-1512]
gi|445740185|gb|ELZ91691.1| NAD-dependent epimerase/dehydratase [Haloferax mucosum ATCC
BAA-1512]
Length = 329
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 120/299 (40%), Gaps = 41/299 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L +LL +G+ VT+ G ++ PF + G +
Sbjct: 8 GGTRFIGRHLVSDLLDNGYAVTLFNRGTHDN------PFEDDPRVQHVQGDRTDDNALRT 61
Query: 145 G--NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
V FD V G AV AD V +++ISS Y + P EG
Sbjct: 62 AKLTVEPDAVFDCVAYKPGDVASAVDIFAD------VDAYVYISSGAAYG-TETIPKREG 114
Query: 203 DVVKPDAGHVQVEKYISENFS------------------NWASFRPQYMIGSGNNKDCEE 244
D Q E++ N S RP + G + + +
Sbjct: 115 VTDLCDCTDEQATDDSPESYGPRKAEGDRVVFEAASRGINAMSVRPCIVYGPHDYTERLD 174
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
++ DR++ + +PG G + A+V D++S + L E E + +N+ R VTL+
Sbjct: 175 YWIDRVLNYDRLVVPGDGTNVWHRAYVEDVASAMRLVAEEGEPGEA--YNVGDRRLVTLE 232
Query: 305 GMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNM-HFYAEPRAAKDILGWRST 359
M ++ A AAG VE+VH + AAG+D +R H + + A+ LGW ST
Sbjct: 233 EMVEVIADAAGTDVEVVHAGERELAAAGLDTTDFVLYREYPHVLSTDKLAR--LGWDST 289
>gi|448347316|ref|ZP_21536188.1| NAD-dependent epimerase/dehydratase [Natrinema altunense JCM 12890]
gi|445630717|gb|ELY83977.1| NAD-dependent epimerase/dehydratase [Natrinema altunense JCM 12890]
Length = 329
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 139/340 (40%), Gaps = 48/340 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEI-VSAGGKTVW 138
GG IG +L +LL ++VTI G + D++ +R N+ + A TV
Sbjct: 8 GGTRFIGRHLVVDLLDHEYDVTIFNRGTRENPFADDDRVDHVEGDRTNDTALEAAATTV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
DP V FD V + A R AD + ++++SS Y +E P
Sbjct: 67 -DPDAV--------FDCVAYHPKDVRAATRLFAD------CEAYVYVSSGAAYGH-EEIP 110
Query: 199 HVEGDVVKPDAGHVQVEKYISENFSNWAS------------------FRPQYMIGSGNNK 240
EG+ Q +E++ N + RP + G +
Sbjct: 111 KREGETPLHSCTTEQATDDSAESYGNRKAEGDRAVFAAADDGVRAMAVRPPIVYGPHDYT 170
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
+ +W+ DR+ R V +PG G + +V D++S L + E A + +N+ R
Sbjct: 171 ERLDWWIDRVNRFDRVVVPGDGTNVWHRVYVEDVASALRIVAERGTAGEA--YNVGDRRL 228
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS 358
VTL+ M L + VEIVH P+ AAG + +P + + A LGW S
Sbjct: 229 VTLEEMVALIGETLATEVEIVHAGPRELAAGDIDLEDYPLYRAYPHVLSTAKLAALGWES 288
Query: 359 TTNLPEDLKERFEEYVKIGRDKKAM--QFEIDDKILESLK 396
T L E + +++++ RD E ++++L L+
Sbjct: 289 TP-LEEAMARAVDDHLESDRDGDGNGPDREAEERVLRVLE 327
>gi|448306805|ref|ZP_21496708.1| NAD-dependent epimerase/dehydratase [Natronorubrum bangense JCM
10635]
gi|445597316|gb|ELY51392.1| NAD-dependent epimerase/dehydratase [Natronorubrum bangense JCM
10635]
Length = 329
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 129/303 (42%), Gaps = 49/303 (16%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGD-----ENSDKMKKPPFNRFNE-IVSAGGKTVW 138
GG IG +L +ELL ++VTI G E D++ +R N+ + A TV
Sbjct: 8 GGTRFIGRHLVEELLEHEYDVTIFNRGSHDNPFETDDRVSHIEGDRTNDSALEAAATTV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
DP V FD V + K++ A + D + ++++SS Y +E P
Sbjct: 67 -DPDAV--------FDCVA-YHPKDVQAATRIFD-----DCEAYVYVSSGAAYG-REELP 110
Query: 199 HVEGDV-VKPDAGHVQVEK-----------------YISENFSNWASFRPQYMIGSGNNK 240
EG+ ++P ++ +E N S RP + G +
Sbjct: 111 KREGETPLEPCTTEQAIDDSSDTYGNRKAEGDRAVFAAAEKGRNAMSVRPCIVYGPHDYT 170
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
+ +W+ DR+ R V +PG G + A+V D++S L + E EA + +N+ R
Sbjct: 171 ERLDWWIDRVNRFDRVLVPGDGTNIWHRAYVEDVASALRIVAERGEAGEA--YNVGDRRL 228
Query: 301 VTLDGMAKLCAQAAGLPVEIVH---YDPKAAGIDAKKAFPFRNM-HFYAEPRAAKDILGW 356
TL+ + + A VEIVH ++ +A GID + +R H + + LGW
Sbjct: 229 TTLEELVDVIAAQLETDVEIVHAGQHELEAGGIDLEDYLLYRPYPHILSTAKLTA--LGW 286
Query: 357 RST 359
ST
Sbjct: 287 EST 289
>gi|448561303|ref|ZP_21634655.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax prahovense DSM 18310]
gi|445721535|gb|ELZ73203.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax prahovense DSM 18310]
Length = 383
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 131/302 (43%), Gaps = 47/302 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGD-----ENSDKMKKPPFNRFN-EIVSAGGKTVW 138
GG IG +L ELL G+ VTI G+ E+ +++ +R + E + TV
Sbjct: 8 GGTRFIGRHLVSELLDGGYAVTIFNRGNHDNPFEDDPRVQHVQGDRTDDEALRTAKLTV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY------K 192
DP V FD V + AV AD V +++ISS Y K
Sbjct: 67 -DPDAV--------FDCVAYKPAEVASAVDIFAD------VDAYVYISSGAAYGREVIPK 111
Query: 193 PADEPPHVE--GDVVKPDAG------HVQVEKYISENFS---NWASFRPQYMIGSGNNKD 241
+E P + + D+G + ++ + E S N S RP + G + +
Sbjct: 112 RENETPLCDCTDEQAADDSGASYGPRKAEGDRVVFEAASRGINAMSVRPCIVYGPEDYTE 171
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR++ V +PG G + A+V D++S + + E EA + +N+ R V
Sbjct: 172 RLDYWIDRVLNYDRVVVPGDGTNVWHRAYVEDVASAMRVVAEEGEAGEA--YNVGDRRVV 229
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNM-HFYAEPRAAKDILGWR 357
TL+ M ++ A AAG VE+VH + A + +R H A + A+ LGW
Sbjct: 230 TLEEMVQVIADAAGTDVEVVHAGERELAATDLSMDDFILYRGYPHVLATDKLAR--LGWE 287
Query: 358 ST 359
ST
Sbjct: 288 ST 289
>gi|164686607|ref|ZP_02210635.1| hypothetical protein CLOBAR_00199 [Clostridium bartlettii DSM
16795]
gi|164604336|gb|EDQ97801.1| NAD dependent epimerase/dehydratase family protein [Clostridium
bartlettii DSM 16795]
Length = 312
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 122/299 (40%), Gaps = 22/299 (7%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG LAK + H+V ++T G + + N S K + E+
Sbjct: 8 GGSDFIGKSLAKHFIKHQHKVDVLTTG--------RVDYEGVNRHFSCDRKNI----EEL 55
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
+ + + D + + + +K+++ +SS+ +YK +++ +G+
Sbjct: 56 EKALKDNEYTYIYDMTVFLKSEIEDLFKFVNRDTLKKYVVLSSSVVYKESEKYISEDGEK 115
Query: 205 -VKPDAGH-----VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPI 258
+ P G VQ E YI ++ + RP ++ G NN E +FFDRI + +P+
Sbjct: 116 ELNPAYGKYGIEKVQAEHYIIDSDIPYIIIRPTHIYGPENNLYRETYFFDRIREGKAIPV 175
Query: 259 PGSGMQ--FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL 316
P + ++ D +L +N + I+N+ + + +T + C + G
Sbjct: 176 PSDRNEPVLNQFIYIDDFVRVLYSLTKNDKVRE--IYNVSTPQNITWKKFIETCGEVMGK 233
Query: 317 PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
I + D I + FPF+N E D + L + L++ +E Y+K
Sbjct: 234 EPIIKYVDSDKIKIKERSYFPFKNTSCILEIEKLIDHGLYIPNILLEKGLRKTYEWYIK 292
>gi|448341771|ref|ZP_21530727.1| NAD-dependent epimerase/dehydratase [Natrinema gari JCM 14663]
gi|445626900|gb|ELY80233.1| NAD-dependent epimerase/dehydratase [Natrinema gari JCM 14663]
Length = 329
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 140/341 (41%), Gaps = 48/341 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEI-VSAGGKTVW 138
GG IG +L +LL ++VTI G + D++ +R N+ + A TV
Sbjct: 8 GGTRFIGRHLVADLLDHEYDVTIFNRGTRENPFADDDRVDHVEGDRTNDTALEAAATTV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
DP V FD V + A R D + ++F+SS Y +E P
Sbjct: 67 -DPDAV--------FDCVAYHPKDVRAATRLFED------CEAYVFVSSGAAYG-REEIP 110
Query: 199 HVEGDV-----VKPDAGHVQVEKY-------------ISENFSNWASFRPQYMIGSGNNK 240
EG+ A E Y ++N + RP + G +
Sbjct: 111 KREGETPLHPCTAEQATDDSAESYGNRKAEGDRAVVAAADNGVRAMAVRPPIVYGPHDYT 170
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
+ +W+ DR+ R V +PG G + +V D++S L + E A + +N+ R
Sbjct: 171 ERLDWWIDRVNRFDRVVVPGDGTNVWHRVYVEDVASALRIVAERGTAGEA--YNVGDRRL 228
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS 358
VTL+ M +L + VE+VH P+ AAG + +P + + A LGW +
Sbjct: 229 VTLEEMVELIGETLATEVEVVHAGPRELAAGDIDLEDYPLYRSYPHVLSTAKLAALGWEA 288
Query: 359 TTNLPEDLKERFEEYVKIGR--DKKAMQFEIDDKILESLKV 397
T L E + +++++ R D+ E ++++L L+
Sbjct: 289 TP-LEEAMARSVDDHLESDRDGDRNGPDREAEERVLSILET 328
>gi|392945316|ref|ZP_10310958.1| nucleoside-diphosphate-sugar epimerase [Frankia sp. QA3]
gi|392288610|gb|EIV94634.1| nucleoside-diphosphate-sugar epimerase [Frankia sp. QA3]
Length = 325
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 138/332 (41%), Gaps = 47/332 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG ++ LL +GH+V + V SD + ++ +++ G T AE
Sbjct: 6 TGGSGFIGSHVVDRLLDAGHDVLSLDVDSRPSDPRAR---SQQVDVLDLPGLTAALAGAE 62
Query: 144 -VGNVVGGVTFDVVLDNNGK----NLDAVRPVADWAKSSGVKQFLFISSAGIY----KPA 194
V +V G D + + N++ V + A+ +GV + LF S+ +Y + A
Sbjct: 63 AVFHVAGMSNVDFAYADPARTVRLNVEGTGNVCEAARQAGVGRVLFASTVWVYGAVGERA 122
Query: 195 DEPPHVE-GDVVKPDAGHVQVEKYISENFSNWASFRPQYMI-----------GSGNNKDC 242
D P E ++ AGHV ++ S++ Y + G G
Sbjct: 123 DPAPLTEDAEITLGRAGHVYTSTKLAAELL-LHSYQQTYGLPFTILRYGIPYGPGMR--- 178
Query: 243 EEWFFDRIVRK----RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
+E R VRK + + G G QF N VRDL+ LA+ PEA ++ I L
Sbjct: 179 DELVLARFVRKALDGESLTVAGDGQQFRNYVFVRDLADAHVLAL-RPEAENATI-ALEGA 236
Query: 299 RAVTLDGMAK-LCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWR 357
AV++ MA+ +C G +E V P FR A R A D+LGWR
Sbjct: 237 EAVSVLEMAQAVCQHFPGTAIEHVPARPG----------DFRGREVSA--RRALDLLGWR 284
Query: 358 STTNLPEDLKERFEEYVKIGRDKKAMQFEIDD 389
TT + +++ E Y+ R +DD
Sbjct: 285 PTTPFTDGVRQYIEWYLANRRPPAQAVQPVDD 316
>gi|408417962|ref|YP_006759376.1| sugar dehydratase, associated with anaerobic toluene degradation
[Desulfobacula toluolica Tol2]
gi|405105175|emb|CCK78672.1| sugar dehydratase, associated with anaerobic toluene degradation
[Desulfobacula toluolica Tol2]
Length = 310
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 32/263 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K +LI+ GG G L + L+ +VT+ T N P N G
Sbjct: 3 KNILII----GGSYFAGRSLVEHLVVQ-KDVTLFTFNRGNI------PLNISRVTQLHGD 51
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK-- 192
+T D + + + + +DV++D G D ++ V + +KQ++FISSA +Y
Sbjct: 52 RT---DSQSIKDNIPTMDWDVLIDFCGYAPDDIKKVIQ-SVPGNIKQYIFISSASVYDHS 107
Query: 193 ---PADEP------PHVE-GDVVKPDAGHVQVEKYISENFSN----WASFRPQYMIGSGN 238
P DE P E G+ + ++ E+ + + N W RP + G N
Sbjct: 108 SILPLDETTRTIETPQPELGEYAEYGLNKIKAEQLLEKECLNRSISWTILRPSIVYGKFN 167
Query: 239 NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
E +FFD + + PV +P + + N V DL+ ++ +ENP +A + +FN VS
Sbjct: 168 YAPRENYFFDLLEKAEPVILPENNLALFNFIFVDDLAKIIIKCIENP-SARNQVFNTVSH 226
Query: 299 RAVTLDGMAKLCAQAAGLPVEIV 321
+ D + + ++ V
Sbjct: 227 EYFSYDTYVAMLEKVINKKIKTV 249
>gi|397774357|ref|YP_006541903.1| NAD-dependent epimerase/dehydratase [Natrinema sp. J7-2]
gi|397683450|gb|AFO57827.1| NAD-dependent epimerase/dehydratase [Natrinema sp. J7-2]
Length = 329
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 131/321 (40%), Gaps = 46/321 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEI-VSAGGKTVW 138
GG IG +L +LL ++VTI G + D++ +R N+ + A TV
Sbjct: 8 GGTRFIGRHLVADLLDHEYDVTIFNRGTRENPFADDDRVDHVEGDRTNDTALEAAATTV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
DP V FD V + A R D + ++F+SS Y +E P
Sbjct: 67 -DPDAV--------FDCVAYHPKDVRAATRLFED------CEAYVFVSSGAAYG-REEIP 110
Query: 199 HVEGDV-----VKPDAGHVQVEKY-------------ISENFSNWASFRPQYMIGSGNNK 240
EG+ A E Y ++N + RP + G +
Sbjct: 111 KREGETPLHPCTAEQATDDSAESYGNRKAEGDRAVVAAADNGVRAMAVRPPIVYGPHDYT 170
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
+ +W+ DR+ R V +PG G + +V D++S L + E A + +N+ R
Sbjct: 171 ERLDWWIDRVNRFDRVVVPGDGTNVWHRVYVEDVASALRIVAERGTAGEA--YNVGDRRL 228
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS 358
VTL+ M +L + VE+VH P+ AAG + +P + + A LGW +
Sbjct: 229 VTLEEMVELIGETLATEVEVVHAGPRELAAGDIDLEDYPLYRSYPHVLSTAKLAALGWEA 288
Query: 359 TTNLPEDLKERFEEYVKIGRD 379
T L E + +++++ RD
Sbjct: 289 TP-LEEAMARSVDDHLESDRD 308
>gi|448328965|ref|ZP_21518270.1| NAD-dependent epimerase/dehydratase [Natrinema versiforme JCM
10478]
gi|445614863|gb|ELY68527.1| NAD-dependent epimerase/dehydratase [Natrinema versiforme JCM
10478]
Length = 329
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 126/304 (41%), Gaps = 51/304 (16%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEI-VSAGGKTVW 138
GG IG +L ++LL ++VTI G+ + D++ +R N+ + + TV
Sbjct: 8 GGTRFIGRHLVEDLLEHEYDVTIFNRGNSENPFADDDRVAHVEGDRTNDTALESAAMTV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
DP V FD V + K++ A + D + ++++SS Y + P
Sbjct: 67 -DPDAV--------FDCVA-YHPKDVHAATRIFD-----DCEAYVYVSSGAAYGAEEIPK 111
Query: 199 HVEGDVVKPDAGHVQVEKYISENFSNWA---------------------SFRPQYMIGSG 237
+ ++P E+ + F + + RP + G
Sbjct: 112 REDETTLEP----CSAEQATDDTFETYGNRKAEGDRAVFAAADNGIRAMAVRPPIVYGPH 167
Query: 238 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
++ + +W+ DR+ R V +PG G + V D++S L + E +A + +N+
Sbjct: 168 DHTERLDWWIDRVNRFDRVVVPGDGTNLRHRVFVEDVASALRIVAERGDAGEA--YNVGD 225
Query: 298 DRAVTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPFRNMHFYAEPRAAKDILG 355
R VTL+ M L A++ V++VH P+ AAG +P + + A LG
Sbjct: 226 RRLVTLEEMVDLIAESLETSVDLVHAGPRELAAGDIDLDDYPLYRSYPHVLSTAKLAALG 285
Query: 356 WRST 359
W ST
Sbjct: 286 WEST 289
>gi|448378891|ref|ZP_21560887.1| NAD-dependent epimerase/dehydratase [Haloterrigena thermotolerans
DSM 11522]
gi|445665914|gb|ELZ18587.1| NAD-dependent epimerase/dehydratase [Haloterrigena thermotolerans
DSM 11522]
Length = 329
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 131/321 (40%), Gaps = 46/321 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEI-VSAGGKTVW 138
GG IG +L ELL ++VT+ T G + D++ +R N+ + A TV
Sbjct: 8 GGTRFIGRHLVAELLDHDYDVTLFTRGTRENPFADDDRVTHVEGDRTNDTALEAAATTV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
DP V FD V + A R D + ++++SS Y +E P
Sbjct: 67 -DPDAV--------FDCVAYHPKDVRAATRIFTD------CEAYVYVSSGAAYG-REEIP 110
Query: 199 HVEGDVVKPDAGHVQVEKYISENFSNWAS------------------FRPQYMIGSGNNK 240
EG+ + Q E + N + RP + G +
Sbjct: 111 KREGETPLHECTPDQATDDSFETYGNRKAEGDRAAFAAADDGVPAMVVRPPIVYGPHDYT 170
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
+ W+ DR+ R V +PG G ++ +V D+++ L + E + + +N+ R
Sbjct: 171 ERLNWWIDRVNRFDRVVVPGDGTNLRHLVYVEDVAAALRIVAERGDPGEA--YNVGDRRL 228
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS 358
V L+ + L A A VEIVH P+ AAG + + +P + + A LGW S
Sbjct: 229 VPLEELVDLLADALETDVEIVHAGPRELAAGEISLEDYPLYRSYPHVLSTAKLAGLGWES 288
Query: 359 TTNLPEDLKERFEEYVKIGRD 379
T L + L +++++ RD
Sbjct: 289 TP-LEDSLARTVDDHLESDRD 308
>gi|448605875|ref|ZP_21658468.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax sulfurifontis ATCC BAA-897]
gi|445741198|gb|ELZ92702.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax sulfurifontis ATCC BAA-897]
Length = 329
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 123/307 (40%), Gaps = 57/307 (18%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L ELL +G+ VTI G+ ++ PF + G +
Sbjct: 8 GGTRFIGRHLVSELLDNGYAVTIFNRGNHDN------PFEDDPRVQHVQGDRTDDEALRT 61
Query: 145 G--NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY----------- 191
V FD V + AV AD V +++ISS Y
Sbjct: 62 AKLTVEPDAVFDCVAYKPAEVASAVDIFAD------VDAYVYISSGAAYGSEVIPKRENE 115
Query: 192 ---------KPADE------PPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS 236
+ AD+ P EGD V +A + N S RP + G
Sbjct: 116 TALCDCTDEQAADDSGASYGPRKAEGDRVVFEAASRDI---------NAMSVRPCIVYGP 166
Query: 237 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
+ + +++ DR++ V +PG G + A+V D++S + + E EA + +N+
Sbjct: 167 EDYTERLDYWIDRVLNYDRVVVPGDGTNVWHRAYVEDVASAMRVVAEEGEAGEA--YNVG 224
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNM-HFYAEPRAAKD 352
R VTL+ M ++ A AAG VE+VH + AA + +R+ H + + A
Sbjct: 225 DRRLVTLEEMVEVIADAAGTDVEVVHAGERELAAADLSMDDFILYRDYPHVLSTDKLAS- 283
Query: 353 ILGWRST 359
LGW ST
Sbjct: 284 -LGWGST 289
>gi|254472988|ref|ZP_05086386.1| NAD dependent epimerase/dehydratase family protein [Pseudovibrio
sp. JE062]
gi|211957709|gb|EEA92911.1| NAD dependent epimerase/dehydratase family protein [Pseudovibrio
sp. JE062]
Length = 295
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 122/300 (40%), Gaps = 37/300 (12%)
Query: 90 IGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG 149
+G L L+ G+ VT++ G P ++++ DP + V G
Sbjct: 1 MGASLIPALISKGYNVTLLNRGSR--------PIPGTQQLIADRN-----DPFAMKQVAG 47
Query: 150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGV--KQFLFISSAGIYKPADEPPHVEGDVV-- 205
++ V+D + + D + G+ K+++ +SSA +YK E D +
Sbjct: 48 --RYEAVIDTSAYTREQSEIAFD---TFGIHAKKWIHLSSAAVYKETKGHLPSEKDSIGG 102
Query: 206 ----------KPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRP 255
K +A H +++ + + RP Y+ G N+ D E++ + R + +RP
Sbjct: 103 ASVWGAYGRDKSEADHF----LLNQEHTPAVAIRPPYLYGPNNDIDREQFVWARALTERP 158
Query: 256 VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG 315
+ +PG G H DL+S + L + A + NL +T++ ++
Sbjct: 159 IILPGDGQTKLQFLHEEDLASFI-LYLLAMHAMPTEAVNLADPHILTIEKWVRMLCDIVE 217
Query: 316 LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
+ EI++ A GI A++ FPFR+ + + W+ L E F+ Y +
Sbjct: 218 VEPEIIYGKDMAPGIPAREYFPFRDYDCALDVTRYLENFDWQPQYKLREGFTHTFKSYTR 277
>gi|56552270|ref|YP_163109.1| NAD-dependent epimerase/dehydratase [Zymomonas mobilis subsp.
mobilis ZM4]
gi|56543844|gb|AAV89998.1| NAD-dependent epimerase/dehydratase [Zymomonas mobilis subsp.
mobilis ZM4]
Length = 317
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 107/239 (44%), Gaps = 21/239 (8%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G YL L+ GHE+ ++ G N + + +++ I + + V +
Sbjct: 8 GGSGHVGSYLVPRLVELGHEIVNVSRGAANPYR-QHYAWSQVKNI--SLDRQVEEKTGQF 64
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
G + + D+V+D L + + + + A V+ FLF SS +Y P E D
Sbjct: 65 GKKIAKLNPDIVIDMISFGLSSTQHLVE-ALRGKVEHFLFCSSIWVYGRYFSIPSTEADS 123
Query: 205 VKP----DAGHVQVEKYISE--NFSNW--ASFRPQYMIGSG-------NNKDCEEWFFDR 249
P G + E ++ + + + FRP +++G G N + E F
Sbjct: 124 PNPIDEYGRGKAESEAWLLQEARLTGFPATCFRPGHIVGEGWVPISPIGNANPET--FSL 181
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
I R + +P G++ + H D++ + LA+EN A+ +FN VS++A+ L G A+
Sbjct: 182 IARGDELVLPNLGLEMVHHVHADDVAQWIVLAIENRAASVGEVFNTVSEQAINLRGYAE 240
>gi|448359916|ref|ZP_21548561.1| NAD-dependent epimerase/dehydratase [Natrialba chahannaoensis JCM
10990]
gi|445641211|gb|ELY94293.1| NAD-dependent epimerase/dehydratase [Natrialba chahannaoensis JCM
10990]
Length = 329
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 141/340 (41%), Gaps = 46/340 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNE-IVSAGGKTVW 138
GG IG +L +LL ++VT++ G + D++ +R N+ + A T
Sbjct: 8 GGTRFIGRHLVSDLLEHDYDVTLLNRGTRENPFADDDRVDHIEGDRTNDSALEAAAATT- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP- 197
+P V + V DV A R AD + +++ISS Y + P
Sbjct: 67 -NPDAVFDCVAYYPKDVQA--------ATRIFAD------CEAYVYISSGAAYGREEIPK 111
Query: 198 -----------PHVEGDVVKPDAGHVQVE-----KYISENFSNWASFRPQYMIGSGNNKD 241
P D G + E + ++ N S RP + G + +
Sbjct: 112 RENETPLESCSPEEATDDSDATYGKRKAEGDRAIEAAADRGVNAMSVRPCIVYGPDDYTE 171
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR+ + V +PG G + A V D++S L + E EA + +N+ R V
Sbjct: 172 RLDFWIDRVNQHDRVVVPGDGTNVWHRAFVDDVASALRIVAERGEAGEA--YNVGDQRLV 229
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRST 359
T D M L A A V+IVH P+ AAG +P + + A LGW ST
Sbjct: 230 TFDEMVDLIADALETTVDIVHAGPRELAAGEIDPTDYPLYREYPHVLSTAKLTALGWEST 289
Query: 360 TNLPEDLKERFEEYVKIGRDKKAM--QFEIDDKILESLKV 397
L +++ E++++ RD +A E ++++L L+
Sbjct: 290 P-LESAMEQSAEDHLESDRDGRAQGPDREAEERVLGILET 328
>gi|448338471|ref|ZP_21527518.1| NAD-dependent epimerase/dehydratase [Natrinema pallidum DSM 3751]
gi|445622785|gb|ELY76230.1| NAD-dependent epimerase/dehydratase [Natrinema pallidum DSM 3751]
Length = 329
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 138/341 (40%), Gaps = 48/341 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEI-VSAGGKTVW 138
GG IG +L +LL ++VTI G + D++ +R N+ + A TV
Sbjct: 8 GGTRFIGRHLVADLLDHEYDVTIFNRGTRENPFADDDRVDHVEGDRTNDTALEAAATTV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
DP V + V DV + A R D + ++ +SS Y +E P
Sbjct: 67 -DPDAVFDCVAYHPKDVRV--------ATRLFED------CEAYVSVSSGAAYG-REEIP 110
Query: 199 HVEGDVVKPDAGHVQVEKYISENFSNWAS------------------FRPQYMIGSGNNK 240
EG+ Q +E++ N + RP + G +
Sbjct: 111 KREGETPLHSCTAEQATDDSAESYGNRKAEGDRAVFAAADDGVRAMAVRPPIVYGPHDYT 170
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
+ +W+ DR+ R V +PG G + +V D++S L + E A + +N+ R
Sbjct: 171 ERLDWWIDRVNRFDRVVVPGDGTNVWHRVYVEDVASALRIVAERGTAGEA--YNVGDRRL 228
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS 358
VTL+ M L + VEIVH P+ AAG + +P + + A LGW S
Sbjct: 229 VTLEEMVALIGETLATEVEIVHAGPRELAAGDIDLEDYPLYRAYPHVLSTAKLAALGWES 288
Query: 359 TTNLPEDLKERFEEYVKIGRDKKAM--QFEIDDKILESLKV 397
T L E + +++++ RD E ++++L L+
Sbjct: 289 TP-LEEAMARSVDDHLESDRDGDGNGPDREAEERVLRVLET 328
>gi|284036051|ref|YP_003385981.1| NAD-dependent epimerase/dehydratase [Spirosoma linguale DSM 74]
gi|283815344|gb|ADB37182.1| NAD-dependent epimerase/dehydratase [Spirosoma linguale DSM 74]
Length = 315
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 114/250 (45%), Gaps = 29/250 (11%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS----AGGKTVWGD 140
GG IG +L L+ +GH+VT+++ + ++ P+ ++ A +T
Sbjct: 7 GGTGHIGTFLVPRLVAAGHDVTVVS-------RRQRDPYQTHDDWQQVAFVALDRTELEK 59
Query: 141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
+ G + +T D V+D LD+ R + D A + V+ FL + ++ + P
Sbjct: 60 QGKFGQAIADLTPDAVIDLISFELDSTRQLTD-ALTGRVRHFLHCGTIWVHGYNELVPVN 118
Query: 201 EGDVVKP-DAGHVQ---VEKYISE--NFSNWAS--FRPQYMIGSG-------NNKDCEEW 245
E D P DA ++ +E Y+ + + + S P +++G G N D
Sbjct: 119 ESDPRYPIDAYGLRKAAIETYLLQEVDLAELPSTVIHPGHIVGPGWTPITPAGNLDAR-- 176
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F ++ R V +P G++ + H D++ LA++NP A+ F+++S+RA+T G
Sbjct: 177 IFTKLATGREVLLPNQGLETLHHVHADDVALGFMLALDNPAASIGESFHILSERAMTWRG 236
Query: 306 MAKLCAQAAG 315
A+ A G
Sbjct: 237 YAQALATWYG 246
>gi|374333250|ref|YP_005083434.1| NAD-dependent epimerase/dehydratase [Pseudovibrio sp. FO-BEG1]
gi|359346038|gb|AEV39412.1| NAD-dependent epimerase/dehydratase [Pseudovibrio sp. FO-BEG1]
Length = 295
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 180 KQFLFISSAGIYKPADEPPHVEGDVV------------KPDAGHVQVEKYISENFSNWAS 227
K+++ +SSA +YK E D + K +A H +++ + +
Sbjct: 75 KKWIHLSSAAVYKETKGHLPSEKDSIGGASVWGAYGRDKSEADHF----LLNQEHTPAVA 130
Query: 228 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
RP Y+ G N+ D E++ + R + +RP+ +PG G H DL+S + L + A
Sbjct: 131 IRPPYLYGPNNDIDREQFVWARALTERPIILPGDGQTKLQFLHEEDLASFI-LYLLAMHA 189
Query: 288 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 347
+ NL +T++ ++ + EI++ A GI A++ FPFR+ +
Sbjct: 190 MPTEAVNLADPHILTIEKWVRMLCDIVEVEPEIIYGKDMAPGIPAREYFPFRDYDCALDV 249
Query: 348 RAAKDILGWRSTTNLPEDLKERFEEYVK 375
+ W+ L E F+ Y +
Sbjct: 250 TRYLENFDWQPQYKLREGFTHTFKSYTR 277
>gi|312880523|ref|ZP_07740323.1| NAD-dependent epimerase/dehydratase [Aminomonas paucivorans DSM
12260]
gi|310783814|gb|EFQ24212.1| NAD-dependent epimerase/dehydratase [Aminomonas paucivorans DSM
12260]
Length = 311
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 135/326 (41%), Gaps = 48/326 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM----TVGDENSDKMKKPPFNRFNE----------I 129
+GG IG L LL GH VT++ + EN ++ RF E
Sbjct: 6 TGGAGFIGSNLVDALLADGHGVTVLDDLSSGYGENLAHLRGREGFRFLEGDVRDEALLAQ 65
Query: 130 VSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
+ G + V+ A VGN + D L + N+ V + A+S+G ++ +F SSAG
Sbjct: 66 AARGQEAVFHLAASVGN---KRSIDNPLTDADINVLGTLKVLEAARSAGCRKVVFSSSAG 122
Query: 190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS-------NWASFRPQYMIGSGNNKDC 242
I+ P E V+PD+ + K +E + + +Y G +
Sbjct: 123 IFGELKTLPIAEDHPVEPDSPY-GCTKLCAEKLCLAYAKLYDLEAVALRYFNVYGPRQRF 181
Query: 243 EEW------FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
+ + F +I+R P+ + G G Q + HVRD+ A + E S FN+
Sbjct: 182 DAYGNVIPIFVFQILRGEPITVFGDGEQTRDFVHVRDVVQANVKAALSREV--SGAFNIA 239
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW 356
S +TL+ + L + GL +++ P+ P H A+ R A+ +LG+
Sbjct: 240 SGTRITLNDLVDLLRE-TGLSPKVLSGPPR----------PGDVRHSLADLRQARTLLGF 288
Query: 357 RSTTNLPEDLKERFEEYVKIGRDKKA 382
+L E LK EYV R++ A
Sbjct: 289 EPRVDLREGLK----EYVAWAREEAA 310
>gi|336255178|ref|YP_004598285.1| NAD-dependent epimerase/dehydratase [Halopiger xanaduensis SH-6]
gi|335339167|gb|AEH38406.1| NAD-dependent epimerase/dehydratase [Halopiger xanaduensis SH-6]
Length = 329
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 133/322 (41%), Gaps = 48/322 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNE-IVSAGGKTVW 138
GG IG +L +ELL ++VTI G+ + D++ +R NE + A TV
Sbjct: 8 GGTRFIGRHLVEELLAHEYDVTIFNRGNHENPFADDDRVDHVEGDRTNESALEAAAMTV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
DP V + V DV A AD +++ISS Y D P
Sbjct: 67 -DPDAVFDCVAYQPRDVRA--------ATTIFAD------CDAYVYISSGAAYGREDIPK 111
Query: 199 HVEGDVVKP----DAGHVQVEKY-------------ISENFSNWASFRPQYMIGSGNNKD 241
+ ++P A E Y +E N + RP + G + +
Sbjct: 112 REDETPLEPCTADQATDDSQETYGNRKAEGDRAVFAAAEEGVNAMAVRPPIVYGPHDYTE 171
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR+ V +PG G + +V D++S L + E E S +N+ R V
Sbjct: 172 RLDFWIDRVNEYDRVIVPGDGTNVWHRVYVEDVASALRIVAERGE--SGEAYNVGDRRIV 229
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNM-HFYAEPRAAKDILGWR 357
TL+ M +L A A V+IVH P+ AA + +R+ H + + A LGW
Sbjct: 230 TLEEMVELIADALETSVDIVHAGPRELEAADLSLDDYVLYRDYPHVLSTAKLAA--LGWE 287
Query: 358 STTNLPEDLKERFEEYVKIGRD 379
ST L E ++ ++++ RD
Sbjct: 288 STP-LEEAMERSVADHLESDRD 308
>gi|361069177|gb|AEW08900.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138126|gb|AFG50217.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138128|gb|AFG50218.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138130|gb|AFG50219.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138132|gb|AFG50220.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138134|gb|AFG50221.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138136|gb|AFG50222.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138138|gb|AFG50223.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138140|gb|AFG50224.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138142|gb|AFG50225.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138144|gb|AFG50226.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138146|gb|AFG50227.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138148|gb|AFG50228.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138150|gb|AFG50229.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138152|gb|AFG50230.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138154|gb|AFG50231.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
Length = 46
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 38/43 (88%), Gaps = 1/43 (2%)
Query: 359 TTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKI-LESLKVPIP 400
+TNLP+DLKERFEEYV IGRDKK ++FE+DDKI LES +V +P
Sbjct: 1 STNLPQDLKERFEEYVAIGRDKKDIKFELDDKIVLESSRVAVP 43
>gi|169261134|gb|ACA52215.1| chloroplast mRNA-binding protein precursor-like protein [Oenothera
elata subsp. hookeri]
Length = 91
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/39 (87%), Positives = 35/39 (89%), Gaps = 1/39 (2%)
Query: 63 SAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGS 101
S+FTV ASA EKKKVLIVNTNSGGHAVIGFY AKELL S
Sbjct: 54 SSFTVSASA-EKKKVLIVNTNSGGHAVIGFYFAKELLAS 91
>gi|448365901|ref|ZP_21554155.1| NAD-dependent epimerase/dehydratase [Natrialba aegyptia DSM 13077]
gi|445654510|gb|ELZ07361.1| NAD-dependent epimerase/dehydratase [Natrialba aegyptia DSM 13077]
Length = 329
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 140/344 (40%), Gaps = 59/344 (17%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNE-IVSAGGKTVW 138
GG IG L +LL G++VT++ G + D++ +R N+ + A T
Sbjct: 8 GGTRFIGRQLVSDLLDHGYDVTLLNRGTHENPFADEDRVDHIEGDRTNDSALEAAAMT-- 65
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
DP V + V DV A R AD +++ISS Y D P
Sbjct: 66 ADPDAVFDCVAYQPRDVQA--------ATRIFADCGA------YVYISSGAAYGREDIPK 111
Query: 199 HVEGD-----VVKPDAGHVQVEKY-------------ISENFSNWASFRPQYMIGSGNNK 240
EG+ +A +E Y +E N S RP + G +
Sbjct: 112 R-EGETPLESCTPEEATDDTMETYGKRKAEGDRAIAAAAERGVNAMSVRPCVVYGPHDYT 170
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
+++ DR+ R + IPG G + A+V D++S L L E A+ +N+ R
Sbjct: 171 ARLDFWIDRVNRFDRILIPGDGTNVWHRAYVDDVASALRLVAER--GAAGEAYNVGDRRL 228
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNM-HFYAEPRAAKDILGW 356
VT++ M L A A V++VH P+ AA I+ +R H + + A+ LGW
Sbjct: 229 VTIEEMIDLIADALETTVDVVHAGPRELAAAEIELADYPLYREYPHILSTAKLAE--LGW 286
Query: 357 RSTTNLPEDLKERFEEYVKI---------GRDKKAMQFEIDDKI 391
ST L + + E+++ GRD +A EI D +
Sbjct: 287 ESTP-LETAMDQSVEDHLASDRTGRENGPGRDAEARVLEILDTV 329
>gi|387792685|ref|YP_006257750.1| nucleoside-diphosphate-sugar epimerase [Solitalea canadensis DSM
3403]
gi|379655518|gb|AFD08574.1| nucleoside-diphosphate-sugar epimerase [Solitalea canadensis DSM
3403]
Length = 316
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 137/329 (41%), Gaps = 60/329 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
+GG IG L K+LL G +V I V D S K+K+ F I K D
Sbjct: 7 TGGAGFIGSNLIKKLLTEG-KVNITCVDNFDDFYSRKVKEHNIASF--INHPNFKLFEFD 63
Query: 141 PAEVGNVVGGVT--FDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQF 182
A+ N+ +T FD ++ GK N+DA + + ++AK+ G+KQF
Sbjct: 64 LADYKNINHFLTKKFDTIIHLAGKAGVRPSIEQPQAYQRANVDATQNLLEFAKNQGIKQF 123
Query: 183 LFISSAGIYK-------PADEP-----PHVEGDVVKPDAGHVQVEKYISENFSNWASFRP 230
+F SS+ +Y DEP P+ + GHV Y + + R
Sbjct: 124 IFASSSSVYGINPNTPWKEDEPLMPISPYASTKLSCEQLGHVYSHLYDIR----FLALRF 179
Query: 231 QYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
+ G D FF I+ + +P+ G G + ++ D+ + +A + + ++
Sbjct: 180 FTVYGPAQRPDLAIHKFFKSILNEAAIPVFGDGNTSRDYTYIDDILQGI-IACIDYDKSN 238
Query: 290 SNIFNLVSDRAVTL----DGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 345
I NL + VTL + + K C + A I++ P G D K F A
Sbjct: 239 YEIINLGNSDTVTLSHLIESIEKTCNKKA-----IINRMPMQPG-DVPKTF--------A 284
Query: 346 EPRAAKDILGWRSTTNLPEDLKERFEEYV 374
+ A +LG+R TT L E LK+ +E Y
Sbjct: 285 DVGKAHRLLGYRPTTKLTEGLKKFYEWYT 313
>gi|315427598|dbj|BAJ49197.1| UDP-glucose 4-epimerase [Candidatus Caldiarchaeum subterraneum]
Length = 315
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 17/154 (11%)
Query: 224 NWASFRPQYMIG------SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 277
N+ RP + G +G + ++F++ ++ +P+PI G+G Q + +V D +
Sbjct: 165 NYVILRPSNVYGPRQPYWAGGWYNFIAYWFEQAIKNKPIPIYGTGEQIRDYTYVEDTAKA 224
Query: 278 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP 337
LA+ENP AA F L + TL+ +AK + + ++ P+ I
Sbjct: 225 YILAMENP-AAIGETFLLPTGIGTTLNQLAKKILEITESQAGVEYHPPRKGDI------- 276
Query: 338 FRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 371
F R A+ LGW+ TTNL + LK +E
Sbjct: 277 ---QRFVGTYRKAEQKLGWKPTTNLDQGLKREYE 307
>gi|383138124|gb|AFG50216.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
Length = 46
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 38/43 (88%), Gaps = 1/43 (2%)
Query: 359 TTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKI-LESLKVPIP 400
+TNLP+DLKERFEEYV +GRDKK ++FE+DDKI LES +V +P
Sbjct: 1 STNLPQDLKERFEEYVAMGRDKKDIKFELDDKIVLESSRVAVP 43
>gi|456386837|gb|EMF52373.1| NAD-dependent epimerase/dehydratase [Streptomyces bottropensis ATCC
25435]
Length = 349
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 53/274 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN-----RFNEIVSAGGK--- 135
+G IG Y+ +ELL G+ V VG +N K +P + R+ ++ G
Sbjct: 4 TGAAGFIGGYVVEELLARGYTV----VGLDNLSKYGRPARSLPDHPRYTPVIGDAGDRAL 59
Query: 136 -TVWGDPAE--VGN--VVGGVTF------DVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
T D E + N ++GGV + D++ +NN A + ++ +++ +
Sbjct: 60 LTQLLDHCEHFIANAALIGGVRYMAELPLDILAENNRLVAGAAYAGIEAYRTGVLRKVTY 119
Query: 185 ISSAGIYKPADEPPHVEGDVVK--PDAGHVQVEKYISENFSN---------WASFRPQYM 233
+SS+ +++ ++ EGD ++ P A +K E ++ W RP
Sbjct: 120 VSSSMVFEKVEDGKIAEGDELEFPPPATAYGFQKLAVEYYAKAAWDQYALPWTIVRPFNC 179
Query: 234 IGSGNNK------DCEEW-----------FFDRIVRKR-PVPIPGSGMQFTNIAHVRDLS 275
+G+G + D E F +R +R+ P I G G QF H RD++
Sbjct: 180 VGAGERRTPHGGADPGEQRPLVQGHVIPDFAERALRRETPFRILGDGQQFRTFTHARDMA 239
Query: 276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
+ + LA+E EAA++ FNL T++ +A+L
Sbjct: 240 TGIVLAMEQ-EAATNEDFNLSGSYGCTIESLARL 272
>gi|448363311|ref|ZP_21551912.1| NAD-dependent epimerase/dehydratase [Natrialba asiatica DSM 12278]
gi|445646510|gb|ELY99496.1| NAD-dependent epimerase/dehydratase [Natrialba asiatica DSM 12278]
Length = 329
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 121/300 (40%), Gaps = 43/300 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEIVSAGGKTVWG 139
GG IG L +LL G++VT++ G + D++ +R N+ + +
Sbjct: 8 GGTRFIGRQLVSDLLDHGYDVTLLNRGTHENPFVDEDRVDHIEGDRTND-SALEAAVMTA 66
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH 199
DPA V + V DV A R AD A ++++SS Y D P
Sbjct: 67 DPAAVFDCVAYQPRDVQA--------ATRIFADCAA------YVYVSSGAAYGREDIPKR 112
Query: 200 VEGDVVKP----DAGHVQVEKY-------------ISENFSNWASFRPQYMIGSGNNKDC 242
++P +A Y +E N S RP + G +
Sbjct: 113 ENETPLEPCTREEATDDTTATYGKRKAEGDRAIAAAAERGVNAMSVRPCIVYGPHDYTAR 172
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
+++ DR+ R + IPG G + A+V D++S L L E A+ +N+ R VT
Sbjct: 173 LDFWIDRVNRFDRILIPGDGTNIWHRAYVDDVASALRLVAER--GAAGEAYNVGDRRLVT 230
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRST 359
++ M L A A V+IVH P+ AA I+ +P + + A LGW ST
Sbjct: 231 IEEMIDLIADALETTVDIVHAGPRELAAAEIELAD-YPLYREYPHVLSTAKLADLGWEST 289
>gi|399035188|ref|ZP_10732652.1| nucleoside-diphosphate-sugar epimerase [Rhizobium sp. CF122]
gi|398066886|gb|EJL58433.1| nucleoside-diphosphate-sugar epimerase [Rhizobium sp. CF122]
Length = 322
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 25/241 (10%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP--PFNRFNEIVS-AGGKTVWGDP 141
GG +G YL L+ GH+V ++ G + KP P ++ I A +
Sbjct: 8 GGSGHVGSYLVPALVERGHQVVNVSRG------VAKPYRPCEAWSRIEHVALDRAAEEKF 61
Query: 142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE 201
+ G + + D+V+D +L + + V + A ++ +LF S+ +Y P E
Sbjct: 62 GQFGAKIAALEPDIVIDMIAFDLASTQQVVE-ALRGRIEHYLFCSTIWVYGRLFTMPSTE 120
Query: 202 GDVVKP-DA---GHVQVEKYISEN-----FSNWASFRPQYMIGSGNN-----KDCEEWFF 247
D P DA G + E ++ F FRP +++G G N + F
Sbjct: 121 ADPTNPIDAYGRGKAESEAWLMRQARVAGFPA-TCFRPGHIVGEGWNPINPIGNANPEIF 179
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
+I R + +P G++ + H D++ + A++N A+ +FN+VS++AVTL G A
Sbjct: 180 SQIARGDELVLPNLGLETVHHVHADDVARWIIAAIDNRAASIGEVFNIVSEQAVTLRGYA 239
Query: 308 K 308
+
Sbjct: 240 E 240
>gi|448390518|ref|ZP_21566141.1| NAD-dependent epimerase/dehydratase [Haloterrigena salina JCM
13891]
gi|445666932|gb|ELZ19584.1| NAD-dependent epimerase/dehydratase [Haloterrigena salina JCM
13891]
Length = 329
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 124/302 (41%), Gaps = 45/302 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEIVSAGGKTVWG 139
GG IG +L +ELL ++VTI+ G + D++ + +R NE T
Sbjct: 8 GGTRFIGRHLVEELLEHDYDVTILNRGSHENPFADDDRVDRVEGDRTNEAALEAAATTV- 66
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH 199
DP V + V DV +A R AD + ++++SS Y D P
Sbjct: 67 DPDAVFDCVAYQPRDV--------REATRIFAD------CEAYVYVSSGSAYGREDIPKR 112
Query: 200 VEGDVVKP----DAGHVQVEKY-------------ISENFSNWASFRPQYMIGSGNNKDC 242
++P A +E Y +E N S RP + G + +
Sbjct: 113 ENETPLEPCTPDQATDDSMETYGNRKAEGDRAVFAAAEQGVNAMSVRPPVVYGPHDYTER 172
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
+W+ DR+ R V +PG G + A+V D++S L + E E + +N+ R VT
Sbjct: 173 LDWWIDRVNRFDRVVVPGDGTNVWHRAYVEDVASALRIVAERGEPDEA--YNVGDRRLVT 230
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNM-HFYAEPRAAKDILGWRS 358
L M +L A VEIV P+ A I+ +R+ H + + A LGW +
Sbjct: 231 LAEMVELIADRLETDVEIVTAGPRELAAGDIELDDYVLYRDYPHVLSTAKLAD--LGWEA 288
Query: 359 TT 360
T+
Sbjct: 289 TS 290
>gi|399575257|ref|ZP_10769015.1| nucleoside-diphosphate-sugar epimerase [Halogranum salarium B-1]
gi|399239525|gb|EJN60451.1| nucleoside-diphosphate-sugar epimerase [Halogranum salarium B-1]
Length = 329
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 130/322 (40%), Gaps = 48/322 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + +E L ++VTI G+ ++ PF + G D ++
Sbjct: 8 GGTRFIGRHTVEEFLAHDYDVTIFNRGNHDN------PFADDERVDHVQGDRT--DDMDL 59
Query: 145 GNVVGGVTFDVVLDNNG-KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD 203
DVV+D K + R V + S V +++ISS Y +E P EG+
Sbjct: 60 QTASLAAKPDVVVDCVAYKPAEVERAVEVF---SDVDAYVYISSGDAYG-REEIPKREGE 115
Query: 204 V----VKPDAGHVQVEKYISENFSNWA------------------SFRPQYMIGSGNNKD 241
PD Q E E + N S RP + G + +
Sbjct: 116 TPMRPCTPD----QAEDDSGETYGNRKAEGDRVVFEAAESGVDAMSVRPCIVYGPHDYTE 171
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ +R+ + +PG G + A+V D++S L + E EA ++N+ R V
Sbjct: 172 RMDYWLNRVENYDRIVVPGDGQNVWHRAYVEDVASALRVVAEEGEAGE--VYNVGDRRLV 229
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNM-HFYAEPRAAKDILGWR 357
TL+ M L A A V++VH + G+D K +R+ H + A LGW
Sbjct: 230 TLEEMLDLAADAMDTDVDVVHAGERELAVGGLDTSKFVLYRDYPHVLDTNKLAS--LGWE 287
Query: 358 STTNLPEDLKERFEEYVKIGRD 379
ST+ L + EE+ + RD
Sbjct: 288 STS-LETAMARTVEEHCESERD 308
>gi|309776442|ref|ZP_07671428.1| putative dTDP-glucose 4,6-dehydratase [Erysipelotrichaceae
bacterium 3_1_53]
gi|308915833|gb|EFP61587.1| putative dTDP-glucose 4,6-dehydratase [Erysipelotrichaceae
bacterium 3_1_53]
Length = 308
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 109/276 (39%), Gaps = 34/276 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
+KVL+ +GG + Y+A+ + + ++V ++ NR N+ G
Sbjct: 11 RKVLV----TGGTVFVSRYIAEYYVKNKYDVYVL---------------NRNNKTQPKGV 51
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+ D + N + FD+V+D D + + D S ++ ISS+ +Y
Sbjct: 52 TLIQADRHNLTNQLQNYHFDIVIDT-AYTSDEITKLLDALGSYD--DYILISSSAVYSEK 108
Query: 195 DEPPHVEGDVV-------KPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
P E + K ++ E+ + E N RP Y+ G NN E + F
Sbjct: 109 TPQPFNEAAALAVNKYWGKYGTDKIEAEEALLERNPNAYILRPPYLYGPMNNVYREAFVF 168
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
D + R +P +G HV DL + + +E S +IFN+ + +++
Sbjct: 169 DCALAGRTFYLPKAGEMKLQFFHVHDLCRFIDVLIE--IKPSQHIFNVGNKDTLSIRRWV 226
Query: 308 KLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 343
+LC Q G E V+ I+ K F F +
Sbjct: 227 ELCYQVVGSQAEFVN---VYKDIEQKNYFSFYEYEY 259
>gi|169261136|gb|ACA52216.1| chloroplast mRNA-binding protein precursor-like protein [Oenothera
grandiflora]
Length = 91
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/39 (84%), Positives = 34/39 (87%), Gaps = 1/39 (2%)
Query: 63 SAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGS 101
S+F V ASA EKKKVLIVNTNSGGHAVIGFY AKELL S
Sbjct: 54 SSFNVTASA-EKKKVLIVNTNSGGHAVIGFYFAKELLAS 91
>gi|433589815|ref|YP_007279311.1| nucleoside-diphosphate-sugar epimerase [Natrinema pellirubrum DSM
15624]
gi|448332587|ref|ZP_21521818.1| NAD-dependent epimerase/dehydratase [Natrinema pellirubrum DSM
15624]
gi|433304595|gb|AGB30407.1| nucleoside-diphosphate-sugar epimerase [Natrinema pellirubrum DSM
15624]
gi|445626016|gb|ELY79366.1| NAD-dependent epimerase/dehydratase [Natrinema pellirubrum DSM
15624]
Length = 329
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 131/321 (40%), Gaps = 46/321 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEI-VSAGGKTVW 138
GG IG +L ELL ++VT+ T G + D++ +R N+ + A TV
Sbjct: 8 GGTRFIGRHLVAELLDHDYDVTLFTRGTRENPFADDDRVAHVEGDRTNDTALEAAATTV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
DP V FD V + A R AD + ++++SS Y +E P
Sbjct: 67 -DPDAV--------FDCVAYHPKDVRAATRIFAD------CEAYVYVSSGAAYG-REEIP 110
Query: 199 HVEGDVVKPDAGHVQVEKYISENFSNWAS------------------FRPQYMIGSGNNK 240
EG+ + Q + + N + RP + G +
Sbjct: 111 KREGETPLHECTPDQATDDSFKTYGNRKAEGDRAAFAAADDGVPAMVVRPPIVYGPHDYT 170
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
+ W+ DR+ V +PG G ++ +V D+++ L + E E + +N+ R
Sbjct: 171 ERLNWWVDRVNHFDRVVVPGDGTNLRHLVYVEDVAAALRIVAERGEPGEA--YNVGDRRL 228
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS 358
V L+ + + A A VEIVH P+ AAG + + +P + + A LGW S
Sbjct: 229 VPLEELVERLADALETDVEIVHAGPRELAAGEISLEDYPLYRSYPHVLSTAKLAGLGWES 288
Query: 359 TTNLPEDLKERFEEYVKIGRD 379
T L + L +++++ RD
Sbjct: 289 TP-LEDSLARTVDDHLESDRD 308
>gi|312142954|ref|YP_003994400.1| NAD-dependent epimerase/dehydratase [Halanaerobium
hydrogeniformans]
gi|311903605|gb|ADQ14046.1| NAD-dependent epimerase/dehydratase [Halanaerobium
hydrogeniformans]
Length = 314
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 114/261 (43%), Gaps = 39/261 (14%)
Query: 126 FNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
F++ AG ++ WG+ F++ NN + + + + AK S +K+F++
Sbjct: 78 FHQAAQAGVRSSWGED-----------FEIYTHNN---IMGTQRLLEAAKESNIKKFVYA 123
Query: 186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN-----FSNW----ASFRPQYMIGS 236
SS+ +Y D+ P E + ++P + + V K EN + N+ S R + G
Sbjct: 124 SSSSVYGDTDQLPMQETNRLQPVSPY-GVSKLAGENLCYLYYKNFNVPTVSLRYFTVFGE 182
Query: 237 GNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
D F I++ + + I G G Q N HV+D+ LA E+ A+ IFN+
Sbjct: 183 RQRPDMAFHIFIKAILQDKKLTIFGDGKQSRNFTHVQDIVKANILAAESD--AAGEIFNI 240
Query: 296 VSD-RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 354
D + V L+ L + G K A + +K H A+ AK++L
Sbjct: 241 GGDGKRVVLNDSIDLMEEIIG----------KKANREYQKVVKGDVKHTSADTSKAKEML 290
Query: 355 GWRSTTNLPEDLKERFEEYVK 375
G+ T+ E L ER E++K
Sbjct: 291 GYEPETDFEEGL-EREVEFLK 310
>gi|448349556|ref|ZP_21538389.1| NAD-dependent epimerase/dehydratase [Natrialba taiwanensis DSM
12281]
gi|445639522|gb|ELY92627.1| NAD-dependent epimerase/dehydratase [Natrialba taiwanensis DSM
12281]
Length = 329
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 123/302 (40%), Gaps = 47/302 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNE-IVSAGGKTVW 138
GG IG L +LL G++VT++ G + D++ +R N+ + A T
Sbjct: 8 GGTRFIGRQLVSDLLDHGYDVTLLNRGTHENPFVDEDRVDHIDGDRTNDSALEAAAMT-- 65
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
DP V + V DV A R AD A +++ISS Y D P
Sbjct: 66 ADPDAVFDCVAYQPRDVQA--------ATRIFADCAA------YVYISSGAAYGREDIPK 111
Query: 199 HVEGDVVKPDAGHVQVEKYIS-----------------ENFSNWASFRPQYMIGSGNNKD 241
++P + + ++ E N S RP + G +
Sbjct: 112 RETETPLEPCSQEEATDDTMATYGKRKAEGDRAIAAAAERGVNAMSVRPCIVYGPHDYTA 171
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR+ R + +PG G + A+V D++S L L E A+ +N+ R V
Sbjct: 172 RLDFWIDRVNRFDRILVPGDGTNVWHRAYVDDVASALRLVAER--GAAGEAYNVGDRRLV 229
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNM-HFYAEPRAAKDILGWR 357
T++ M L A A V++VH P+ AA I+ +R H + + A+ LGW
Sbjct: 230 TIEEMIDLIADALETTVDVVHAGPRELAAAEIELADYPLYREYPHILSTAKLAE--LGWE 287
Query: 358 ST 359
ST
Sbjct: 288 ST 289
>gi|406919667|gb|EKD57900.1| hypothetical protein ACD_57C00108G0002 [uncultured bacterium]
Length = 304
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 125/325 (38%), Gaps = 65/325 (20%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM-----------------TVGDENSDKMKKPPFNRF 126
+GG IG ++ + LL SG++V ++ VGD + K
Sbjct: 6 TGGAGFIGSHVVRLLLESGYQVVVLDNLSHGFRQNVDKRAKLIVGDIRDSRKTKEALKGI 65
Query: 127 NEIVSAGGKTVW----GDPAEV--GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK 180
+ ++ G V DP + NV+G V L+ +R V G +
Sbjct: 66 DAVIHMAGLIVVPESVADPVKYYDNNVLGAVNL----------LECMRDV-------GCR 108
Query: 181 QFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYIS--ENFSNWASFRPQYMI 234
+ +F SSA +Y D+ P E V PD A +E Y+ N+ + +Y
Sbjct: 109 KIIFSSSACVYGTPDKLPIKEDAAVHPDNPYGATKAAIEVYLQTYHQIFNFDTIILRYFN 168
Query: 235 GSGNNKDCEEW------FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
G K + F + K+P+P+ G Q + ++ DL+ ++ + +
Sbjct: 169 PYGPGKMGKPITHAIPNFIKATLAKKPIPLYWKGEQIRDFIYIDDLARA---HIDVLKLS 225
Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPR 348
NIFN+ +++ + + + + + G V I + + A YA
Sbjct: 226 GFNIFNIGTEKGIKVKDIVEEIFKIVGFRVPIADLGKRPGDVPAN----------YASSA 275
Query: 349 AAKDILGWRSTTNLPEDLKERFEEY 373
K +GW++ +LPE LK E Y
Sbjct: 276 KLKKAVGWKAKVSLPEGLKRTIEYY 300
>gi|168006662|ref|XP_001756028.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692958|gb|EDQ79313.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 305
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 269 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKA 327
HV+D++ M + V E A +I+N+ + VT +G+AK A A G PV V Y+PK
Sbjct: 115 GHVKDMA-MAFVTVLGNEKAYGHIYNINDAKNVTFNGIAKASAIADGSPVPRTVQYNPKD 173
Query: 328 AGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEI 387
KKAF R+ H + + L + L + K+ + G +KA F
Sbjct: 174 FDFSKKKAFSLRDQHIFTSAEKVEKELSFTPEYGLIDGWKDSYNLDFGRGTSRKAANFPT 233
Query: 388 DDKILESL 395
DD LE L
Sbjct: 234 DDMTLEKL 241
>gi|284166451|ref|YP_003404730.1| NAD-dependent epimerase/dehydratase [Haloterrigena turkmenica DSM
5511]
gi|284016106|gb|ADB62057.1| NAD-dependent epimerase/dehydratase [Haloterrigena turkmenica DSM
5511]
Length = 329
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 121/301 (40%), Gaps = 45/301 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEIVSAGGKTVWG 139
GG IG +L +ELL ++VTI+ G + D++ + +R NE T
Sbjct: 8 GGTRFIGRHLVEELLEHDYDVTILNRGSHENPFVDDDRVDRVEGDRANEAALEAAATTI- 66
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH 199
DP V FD V +A R D + ++++SS Y D P
Sbjct: 67 DPDAV--------FDCVAYQPRDVREATRIFED------CEAYVYVSSGSAYGREDIPKR 112
Query: 200 VEGDVVKP----DAGHVQVEKY-------------ISENFSNWASFRPQYMIGSGNNKDC 242
+ ++P A E Y +E N S RP + G + +
Sbjct: 113 EDETPLEPCTPDQATDDSSESYGNRKAEGDRAVFAAAEQGVNAMSVRPPVVYGPHDYTER 172
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
+W+ DR+ R V +PG G + A+V D++S L + E E + +N+ R VT
Sbjct: 173 LDWWIDRVNRFDRVVVPGDGTNVWHRAYVEDVASALRIVAERGEPGEA--YNVGDRRLVT 230
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNM-HFYAEPRAAKDILGWRS 358
L M +L A +EIV P+ A I+ +R+ H + + A LGW +
Sbjct: 231 LAEMVELIADRLATDIEIVTAGPRELAAGDIELDDYVLYRDYPHVLSTAKLAD--LGWEA 288
Query: 359 T 359
T
Sbjct: 289 T 289
>gi|383620908|ref|ZP_09947314.1| NAD-dependent epimerase/dehydratase [Halobiforma lacisalsi AJ5]
Length = 331
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 137/326 (42%), Gaps = 50/326 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNE-IVSAGGKTVW 138
GG IG +L ELL +EVT+ G+ + D++ +R ++ + A G+ V
Sbjct: 8 GGTRFIGRHLVDELLAHDYEVTLFNRGNHENPFADDDRVDHVEGDRTDDDALEAAGREV- 66
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY------K 192
DP V + V DV A R AD + ++++SS Y K
Sbjct: 67 -DPDAVFDCVAYYPDDVRT--------ATRIFAD------CEAYVYVSSGAAYGREDIPK 111
Query: 193 PADEPPHVE------GDVVKPDAGHVQVEK-----YISENFSNWASFRPQYMIGSGNNKD 241
DE P E D G+ + E +EN N P + G + +
Sbjct: 112 REDETPLAECTAEQATDDSHATYGNRKAEGDRAVFEAAENGVNAIPPPPPIVYGPHDYTE 171
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR+ R V IPG G + +V D++S L + E E + +N R V
Sbjct: 172 RLDFWIDRVNRFDRVVIPGDGTNLWHRVYVEDVASALRIVAERGEPGEA--YNTGDRRLV 229
Query: 302 TLDGMAKLCAQA--AGLPVEIVHYDPK---AAGIDAKKAFPFRNM-HFYAEPRAAKDILG 355
T++ M +L A + VE+VH P+ A GI+ + +R H A + A LG
Sbjct: 230 TIEEMVELIADQVDSTADVEVVHAGPRELAAGGIELEDYPLYREYPHVMATNKLAD--LG 287
Query: 356 WRSTTNLPEDLKERFEEYVKIGRDKK 381
W ST L E + E++++ RD +
Sbjct: 288 WESTP-LEEAMARAVEDHLESDRDGR 312
>gi|293402453|ref|ZP_06646589.1| putative dTDP-glucose 4,6-dehydratase [Erysipelotrichaceae
bacterium 5_2_54FAA]
gi|291304116|gb|EFE45369.1| putative dTDP-glucose 4,6-dehydratase [Erysipelotrichaceae
bacterium 5_2_54FAA]
Length = 313
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 111/279 (39%), Gaps = 34/279 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KKVLI +GG + Y+A+ + ++V ++ NR ++ S G
Sbjct: 16 KKVLI----TGGTVFVSRYIAEYYVKKHYDVYVL---------------NRNSKEQSKGV 56
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K + D +GN++ FDVV+D + D + + A + ++ ISS+ +Y
Sbjct: 57 KLIQADRHNLGNLLRDFHFDVVIDTAYTSDDVEKLL---AALDSYEDYILISSSAVYPEN 113
Query: 195 DEPPHVEGDVV-------KPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
P E V K ++ E + + N RP Y+ G NN E + F
Sbjct: 114 LSQPFKEDSPVGLNNYWGKYGIDKIEAETALLKRNPNAYILRPPYLYGQMNNVYREAFVF 173
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
+ + R +P G H+ DL + + ++ A +IFN+ + +++
Sbjct: 174 ECALADRKFYLPKDGEMKLQFFHIHDLCRFIDILLKQKPA--QHIFNVGNKDTISIREWV 231
Query: 308 KLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAE 346
LC G Y+ I+ + F F + +Y +
Sbjct: 232 ALCYHVVGKQAA---YEYVYGDIEQRNYFCFYDYEYYLD 267
>gi|223984220|ref|ZP_03634368.1| hypothetical protein HOLDEFILI_01661 [Holdemania filiformis DSM
12042]
gi|223963835|gb|EEF68199.1| hypothetical protein HOLDEFILI_01661 [Holdemania filiformis DSM
12042]
Length = 261
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 21/209 (10%)
Query: 146 NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY------------KP 193
+ G TFD V+D +G N + + + VK ++FISS+ +Y +P
Sbjct: 3 QTLKGRTFDAVIDVSGLNQKQIEICCE-SLDCSVKHWIFISSSAVYDVDRCALPILETEP 61
Query: 194 ADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK 253
E P+ A + + ++ + RP YM G N E + FD ++
Sbjct: 62 LGENPYWGQYGTDKIAAESALTAFCQKHNIALSILRPPYMYGEYNYVQRESFIFDHLMHN 121
Query: 254 RPVPIPGSG--MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 311
+P+ IP + +QF + DL+ ++T + P+ ++N+ + V+ + CA
Sbjct: 122 QPILIPAADNRIQF---CYTGDLAKIVTTLLACPKQGIE-VYNVGDQQGVSFSEWIQQCA 177
Query: 312 QAAGLPVEIVHYDPKAAGIDAKKAFPFRN 340
G +I+ A AK FPFR+
Sbjct: 178 DVCGTQAKII--PVHDANWKAKDYFPFRD 204
>gi|291301968|ref|YP_003513246.1| NAD-dependent epimerase/dehydratase [Stackebrandtia nassauensis DSM
44728]
gi|290571188|gb|ADD44153.1| NAD-dependent epimerase/dehydratase [Stackebrandtia nassauensis DSM
44728]
Length = 316
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 113/262 (43%), Gaps = 36/262 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG + IG + + L G EVTI + G + K P ++ G GD A V
Sbjct: 7 GGTSFIGRTIVETALLRGDEVTIFSRGKTGAALFPKVP-----RLI---GDRETGDYAAV 58
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP----------- 193
+ +D V+D + V D A S V ++LFISS +Y P
Sbjct: 59 ADG----EWDAVVDVSAILPRQVDQAMD-ALSGRVGRYLFISSHAVYSPEGAVPDSDESA 113
Query: 194 ADEPPHVEGDVVKPDA-GHVQV--EKYISENFSNWASF-RPQYMIGSGNNKDCEEWFFDR 249
A +PP D + + G ++V E + + F A+ RP + G +N+D ++ R
Sbjct: 114 ARKPPLARADEIDNETYGRLKVGCEDAVLKRFGAGATIVRPGRVAGPYDNQDVFTYWVRR 173
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLT--LAVENPEAASSNIFNLVSD-RAVTLDGM 306
R V +P Q + RDL+ ++ LA + P A FN V VT G+
Sbjct: 174 AARGGKVALPADPRQPVQVVDSRDLARLVVRLLADDRPGA-----FNAVGPAEPVTFAGL 228
Query: 307 AKLCAQAAGLPVEIVHYDPKAA 328
++CA AAG VEIV +AA
Sbjct: 229 IEICAAAAGSRVEIVPVPAEAA 250
>gi|56965485|ref|YP_177218.1| RNA-binding protein [Bacillus clausii KSM-K16]
gi|56911730|dbj|BAD66257.1| RNA-binding protein [Bacillus clausii KSM-K16]
Length = 320
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 135/321 (42%), Gaps = 38/321 (11%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K+VL++ GG +G ++L+ G+ V +T G ++ + + +
Sbjct: 2 KQVLVM----GGTEFVGKAFLQQLINLGYSVDFLTTG------RRRSTISGYTTHIKCNR 51
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K +++ + + ++D + + + V + + ++++LF+SS +Y P+
Sbjct: 52 K----KRSDLTAALKHKQYHYIVDISAYDKEDVETLFLSMDHTKLERYLFLSSGSVYCPS 107
Query: 195 D-----EPPHVEGDVVKPDAGHVQVEKYISENF----SN---WASFRPQYMIGSGNNKDC 242
D + P E G + K +E+F +N + FRP Y+ G GNN
Sbjct: 108 DTIFLEDSPRGENS----HWGKYGLNKKEAEDFLISKANEIPFVIFRPPYIYGEGNNLYR 163
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
E +FF + P+ IP S H+ D+ + EN A + +NL +T
Sbjct: 164 EAYFFYNMALGNPILIPESNTN-VQFIHIADVLRTILATFENRHAVCQS-YNLAHRETIT 221
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPKAAG---IDAKKAFPFRNMHFYAE-PRAAKDILGWRS 358
+ + P +I+ + K I +K+ FPFR++ + + + KD L
Sbjct: 222 WKSLMSTFKKITNSPSKIIEVEQKFLTENEIGSKQFFPFRDVSYLMDTTKLTKDGLP-TP 280
Query: 359 TTNLPEDLKERFEEYVKIGRD 379
NL + L ER ++ K RD
Sbjct: 281 AINLEKGL-ERSYKWFKQQRD 300
>gi|375145657|ref|YP_005008098.1| UDP-glucuronate 5'-epimerase [Niastella koreensis GR20-10]
gi|361059703|gb|AEV98694.1| UDP-glucuronate 5'-epimerase [Niastella koreensis GR20-10]
Length = 326
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 137/328 (41%), Gaps = 44/328 (13%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
K++L+ +GG IG L K+LL +G + +T + D N ++ N N A
Sbjct: 2 KRILV----TGGAGFIGSNLIKKLLSTGCYHITCLDNFD-NFYAREQKELNINNFFNDAC 56
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSS 177
+ + D V DV++ K N+ + + ++A+
Sbjct: 57 FEFIEDDIRNVHKHASLDNIDVIIHLAAKAGVRPSIQEPELYQNVNIGGTQALLEFARKR 116
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS---------NWASF 228
+KQFLF SS+ +Y + P E D + P + + KY SE F + +
Sbjct: 117 NIKQFLFASSSSVYGVSPNVPWNENDRMLPISPYA-CSKYASEMFGYTYSHLYKIRFIAL 175
Query: 229 RPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
R + G D FF+ I +K+P+ I G+G + ++ D+ + A++ +A
Sbjct: 176 RFFTVYGPAQRPDLAIHKFFNCIHQKKPITIFGNGDTARDYTYIDDIVQGIIAAID-YDA 234
Query: 288 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 347
+ +FNL + R V+L+ + + Q G I+ Y P+ G P YA+
Sbjct: 235 SDFEVFNLGNHRTVSLNNLIRNIEQICG-SRAILQYYPEQPG-----DVPLT----YADI 284
Query: 348 RAAKDILGWRSTTNLPEDLKERFEEYVK 375
A +L ++ +T+L L + Y K
Sbjct: 285 GKAVSLLNYKPSTDLLSGLGNFYNWYTK 312
>gi|448469030|ref|ZP_21600039.1| NAD-dependent epimerase/dehydratase [Halorubrum kocurii JCM 14978]
gi|445809857|gb|EMA59893.1| NAD-dependent epimerase/dehydratase [Halorubrum kocurii JCM 14978]
Length = 330
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 123/297 (41%), Gaps = 37/297 (12%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + +LL +G+EV ++ G ++ PF + + G D +
Sbjct: 9 GGTRFIGRHTVADLLANGYEVGMLNRG------TRENPFADDDRVTHVEGDR--KDDQAL 60
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVAD-WAKSSGVKQFLFISSAGIYKPADEPPHVEGD 203
V DVV+D V D +A + G ++++SS Y A+E P EG+
Sbjct: 61 RTAKLSVEPDVVIDCVAYQPADVEAATDVFADADG---YVYVSSGDSYA-AEEVPKREGE 116
Query: 204 V----VKPD-AGHVQVEKY-------------ISENFSNWASFRPQYMIGSGNNKDCEEW 245
P+ A E Y +E N + RP + G + + ++
Sbjct: 117 TPLRACTPEQAADDGSETYGNRKAEGDRAVFAAAEEGVNAMAVRPCIVYGPYDYTERLDY 176
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
+ DR+ V +PG G + A+V D++S L + E EA + +N+ RA+TL+
Sbjct: 177 WIDRVCAHDRVVVPGDGQNLWHRAYVEDVASALRIVAERGEAGRA--YNVGDRRALTLEE 234
Query: 306 MAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRST 359
+ A AAG+ E+V A G++ +R + A D LGW ST
Sbjct: 235 TLETIADAAGVDCEVVTASADALAAGGLEPDDFVLYREYPHLLDTCALAD-LGWEST 290
>gi|429193538|ref|YP_007179216.1| nucleoside-diphosphate-sugar epimerase [Natronobacterium gregoryi
SP2]
gi|448323913|ref|ZP_21513357.1| NAD-dependent epimerase/dehydratase [Natronobacterium gregoryi SP2]
gi|429137756|gb|AFZ74767.1| nucleoside-diphosphate-sugar epimerase [Natronobacterium gregoryi
SP2]
gi|445620053|gb|ELY73562.1| NAD-dependent epimerase/dehydratase [Natronobacterium gregoryi SP2]
Length = 329
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 137/336 (40%), Gaps = 38/336 (11%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L ELL +G++VTI G+ + PF + + G +
Sbjct: 8 GGTRFIGRHLVTELLANGYDVTIFNRGNHDD------PFAADDRVERVQGDRTD--DDAL 59
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
V D V D D VR + + +++ISS Y D P EG+
Sbjct: 60 AAAADEVDPDAVFDCVAYYPDDVRAAT--RIFADCEAYVYISSGAAYGREDIPKR-EGET 116
Query: 205 -----VKPDAGHVQVEKY-------------ISENFSNWASFRPQYMIGSGNNKDCEEWF 246
+ A + + Y +E + S RP + G + + +++
Sbjct: 117 PLAPCTRNQATDDEGDTYGNRKAEGDRAVFEAAEEGVDAMSLRPPIVYGPHDYTERLDFW 176
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
DR+ R V +PG G + +V D++S L + E + + +N R VTL+ M
Sbjct: 177 IDRVNRFDRVVVPGDGTNIWHRVYVEDVASALRIVAERGDPGEA--YNTGDRRLVTLEEM 234
Query: 307 AKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPE 364
+L A VEIVH P+ AG + +P + + A LGW ST L E
Sbjct: 235 VELIADQLDTDVEIVHAGPRELEAGDIELEDYPLYRDYPHVMSTAKLADLGWESTP-LEE 293
Query: 365 DLKERFEEYV---KIGRDKKAMQFEIDDKILESLKV 397
+ E+++ ++GR + + E ++++L L+
Sbjct: 294 AMGRAVEDHLESDRVGR-ENGPEREAEERVLGILET 328
>gi|302342054|ref|YP_003806583.1| NAD-dependent epimerase/dehydratase [Desulfarculus baarsii DSM
2075]
gi|301638667|gb|ADK83989.1| NAD-dependent epimerase/dehydratase [Desulfarculus baarsii DSM
2075]
Length = 327
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 129/331 (38%), Gaps = 48/331 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG G L + LLG GH+V + +N + +K V G T D
Sbjct: 6 TGGTGFTGAALVERLLGLGHQVVAL----DNKEGLKPQALRDMGAEVVIGSVT---DEPL 58
Query: 144 VGNVVGGVTFDVVLDNNGKNLD------------AVRPVADWAKSSGVKQFLFISSAGIY 191
V + GV L + +D R VA A+ GV++F++ S+ G++
Sbjct: 59 VRRCMRGVEVVHHLAAAFREMDVPRNYYDQVNEGGARLVAQAAQDEGVRKFIYCSTCGVH 118
Query: 192 KPADEPPHVEGDVVKPDAGHVQVEKYISE--------NFSNWASFRPQYMIGSGNNKDCE 243
+ PP E + A + Q KY E RP + G G+ +
Sbjct: 119 GNVERPPADENAPINA-ADYYQQTKYNGEVALRPFIDAGMKATILRPAAIYGPGDPE--R 175
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
W V+K P+ GSG + ++ +L LA E + + + ++ +
Sbjct: 176 FWMIYSRVQKGVFPMFGSGKTLYHPLYIDNLIDAFLLAQEE-DKGLGQAYLIADEQYYPI 234
Query: 304 DGMAKLCAQAAGLPVEIVHYD----PKAAGIDAKKAFPF--------RNMHFYAEPRA-- 349
+ + A+A G PV I H+ A + K PF R + +Y + RA
Sbjct: 235 EELVTRVAKAMGKPVRIPHFPVWPVVAAGHVCEKLCKPFGVAPPIFPRRVDWYRQNRAFD 294
Query: 350 ---AKDILGWRSTTNLPEDLKERFEEYVKIG 377
AK LG++ + E L++ +E YV+ G
Sbjct: 295 IGKAKRELGYQPKVGIDEGLRKTYEWYVREG 325
>gi|288916919|ref|ZP_06411291.1| NAD-dependent epimerase/dehydratase [Frankia sp. EUN1f]
gi|288351628|gb|EFC85833.1| NAD-dependent epimerase/dehydratase [Frankia sp. EUN1f]
Length = 303
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 115/301 (38%), Gaps = 47/301 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G + + +GHEVT + G + ++ + G K V GD +
Sbjct: 7 GGSGFLGSRTVRHAVAAGHEVTGLARGGSGAGRLS-----------ALGAKVVRGDLDDA 55
Query: 145 GNVVGG---VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE 201
+ G D +L+ + + A + + + LF+S+ GI+ D P
Sbjct: 56 AALRGAFAETKADALLNIASLGFGHADTIVETALQAHLTRALFVSTTGIFTALDPPSKQT 115
Query: 202 GDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR--KRPVPIP 259
+ E I + +W RP + G ++++ + + R P+P+P
Sbjct: 116 ---------RLAAENTIRTSGLDWTIIRPTMIYGGPDDRNMAR-LLNLLQRWPMLPIPLP 165
Query: 260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG---- 315
G G Q HV DL+ +L AVE + + A+TL + + AAG
Sbjct: 166 GGGHQLHQPIHVDDLAELLVRAVEL-DVTIGRTYTAAGPAALTLRQVVEQAGAAAGRRPT 224
Query: 316 -LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 374
LP+ + P AA I A + H A PR ++ L ED E+ V
Sbjct: 225 CLPIPV---RPVAALIGAYE-------HRSARPRLKRE-----QIARLTEDKAFSIEDAV 269
Query: 375 K 375
+
Sbjct: 270 R 270
>gi|432328689|ref|YP_007246833.1| nucleoside-diphosphate-sugar epimerase [Aciduliprofundum sp.
MAR08-339]
gi|432135398|gb|AGB04667.1| nucleoside-diphosphate-sugar epimerase [Aciduliprofundum sp.
MAR08-339]
Length = 292
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 102/223 (45%), Gaps = 31/223 (13%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 222
N+ + ++A+ ++ F++ISSA IY + P E P + + + K E +
Sbjct: 78 NIIGTLNLLEYARRRDIEHFIYISSAAIYGEPEYLPIDEKHPKNPKSPY-GLSKLTGETY 136
Query: 223 S---------NWASFRPQYMIGSGNNKDCEEW------FFDRIVRKRPVPIPGSGMQFTN 267
+ AS RP + I S + F DR R P+ I G G Q +
Sbjct: 137 AMMYGELYGLKVASIRP-FNIFSPRQDPSSPYSGVISIFVDRAKRGLPLVIYGDGEQTRD 195
Query: 268 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 327
+V D+ S++ + E ++ ++N + R ++++ +A++ + +G V I+H P+
Sbjct: 196 FVNVHDVVSLIKIV---SEKKATGVYNCATGREISINKLAEMIKELSGKDVPIMHDKPRD 252
Query: 328 AGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 370
D +++ YA+ A++ LG+ TNL EDL+ F
Sbjct: 253 G--DIRRS--------YADITRARN-LGFEPHTNLKEDLRRFF 284
>gi|229818903|ref|YP_002880429.1| NAD-dependent epimerase/dehydratase [Beutenbergia cavernae DSM
12333]
gi|229564816|gb|ACQ78667.1| NAD-dependent epimerase/dehydratase [Beutenbergia cavernae DSM
12333]
Length = 342
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 107/262 (40%), Gaps = 26/262 (9%)
Query: 68 KASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM--KKPPFNR 125
+ +A +VL + GG+ I ++ + GH++T++ G + +PP
Sbjct: 3 RVAAMAALRVLFI----GGNGTISAASSRLAIERGHDLTLLNRGVSAASDTPDARPPIEG 58
Query: 126 FNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGV-KQFLF 184
+V G DP + V G +DVV+ N ++ + AD GV Q+++
Sbjct: 59 ARSLVGDAG-----DPDSIRAAVAGQEWDVVV--NFRSFSPEQAAADVEIFDGVVGQYVY 111
Query: 185 ISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYISENF--SNWAS-------FRPQYMI 234
ISSA Y KP + P E +K K SE W RP +
Sbjct: 112 ISSASAYAKPVEHLPITESTPLKNPFWQYSRNKIASEEVLVRAWRERDFPATIVRPSHTY 171
Query: 235 GSGNNKDCEEWF-FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
+ W DR+ R PVP+ G G + H RD + + + A + F
Sbjct: 172 DERSIPIPGRWTAIDRLRRGAPVPVVGDGTSLWTLTHTRDFAVAF-VGLLGDRRAVGDTF 230
Query: 294 NLVSDRAVTLDGMAKLCAQAAG 315
++ SD ++T + ++ A+AAG
Sbjct: 231 HITSDESLTWAQITRILARAAG 252
>gi|345017158|ref|YP_004819511.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344032501|gb|AEM78227.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 311
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 170 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF------- 222
+ + + SGVK+ ++ SSA +Y + P EG + P + + + K+ +E++
Sbjct: 99 ILECCRKSGVKKIIYASSAAVYGNPEYLPIDEGHKINPISSY-GISKHTAEHYFEVYSQL 157
Query: 223 --SNWASFRPQYMIGSGNNKDCE----EWFFDRIVR-KRPVPIPGSGMQFTNIAHVRDLS 275
+ R + G + E F D++++ +RPV I G G Q + +V+D++
Sbjct: 158 YDLKYTILRYANVYGIRQDPKGEGGVISIFTDKMLKGERPV-IFGDGNQTRDFVYVKDVA 216
Query: 276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
LA+E + + N+ +++ +++ + + + +E ++ +P+ I
Sbjct: 217 KANLLALER---GDNEVVNVSTNKPTSINELVDMMNKIMNTSLEPIYTEPRKGDI----- 268
Query: 336 FPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 373
MH Y + + A D+LGW+ +L + L+E E Y
Sbjct: 269 -----MHSYLDNKKALDVLGWKPEYSLEDGLRETIEYY 301
>gi|388254822|gb|AFK24937.1| NAD-dependent epimerase/dehydratase [uncultured archaeon]
Length = 304
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 28/224 (12%)
Query: 161 GKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP--------DAGHV 212
G N+D + + A S +K F+F SSA +Y P E + P AG
Sbjct: 93 GVNVDGTLALLE-ACSGRIKNFIFASSAAVYGRQTRLPISENQPLAPLSVYGATKMAGEG 151
Query: 213 QVEKYISENFSNWASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTN 267
V Y + A+ ++ G N+ E F +R+ +P I G G+Q +
Sbjct: 152 LVSAYTNSRQIPQATI-LRFFNAYGQNQSLEYAGVIAKFAERLAEGKPPIIFGDGLQTRD 210
Query: 268 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 327
V D+ + LA++ + +S ++N+ + R V+++ +A + GL V +H D
Sbjct: 211 FVSVEDIVGAIILAMD---STTSGVYNIGTGRPVSVNDLAASMIRIMGLNVTPIHRDLVD 267
Query: 328 AGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 371
I +H YA+ + AK LG+ +TT+L LK+ +
Sbjct: 268 GEI----------LHSYADTKKAKSELGFVATTDLQTQLKKLMQ 301
>gi|448455930|ref|ZP_21594862.1| NAD-dependent epimerase/dehydratase [Halorubrum lipolyticum DSM
21995]
gi|445813149|gb|EMA63131.1| NAD-dependent epimerase/dehydratase [Halorubrum lipolyticum DSM
21995]
Length = 333
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 126/297 (42%), Gaps = 37/297 (12%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + +LL +G+EV ++ G + PF+ + G ++
Sbjct: 12 GGTRFIGRHTVSDLLANGYEVGMLNRG------THENPFSDDERVTHVEGDR--KSERDL 63
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVAD-WAKSSGVKQFLFISSAGIYKPADEPPHVEGD 203
+ DVV+D V + +A + G ++++SS Y A+E P EG+
Sbjct: 64 RTAKLSIEPDVVIDCVAYQPADVETATEVFADADG---YVYVSSGDSYA-AEEIPKREGE 119
Query: 204 V-VKP----DAGHVQVEKY-------------ISENFSNWASFRPQYMIGSGNNKDCEEW 245
++P A + E Y +E + + RP + G + + ++
Sbjct: 120 TPLRPCTPEQATDDESETYGNRKAEGDRAVFAAAEEGVDATAVRPCIVYGPYDYTERLDY 179
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
+ DR++ + V +PG G + A+V D++S L + E EA + +N+ RA+TL+
Sbjct: 180 WIDRVLSRDRVVVPGDGQNLWHRAYVEDVASALRIVAERGEAGRA--YNVGDRRALTLEE 237
Query: 306 MAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRST 359
+ A AAG+ EIV A G++ +R + A D LGW ST
Sbjct: 238 TLETIADAAGVDCEIVTASADALAAGGLEPDDFVLYREYPHLLDTCALAD-LGWEST 293
>gi|149918317|ref|ZP_01906808.1| GalE2 [Plesiocystis pacifica SIR-1]
gi|149820843|gb|EDM80252.1| GalE2 [Plesiocystis pacifica SIR-1]
Length = 324
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 137/325 (42%), Gaps = 41/325 (12%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI------ 129
K+LI +GG +G L + LG+ H +TI+ +D P R+ E
Sbjct: 2 KILI----TGGAGFVGQAL-RRALGNEHTLTILDTAPAPADL---GPSTRWIEASILDEA 53
Query: 130 ----VSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
AG + V+ A +G D+V N ++AV +A + V+ LF
Sbjct: 54 ALREAFAGQQAVFHLAAALGVRACQEREDIVEQVNVGGMEAV--IAAAIATPSVEHLLFT 111
Query: 186 SSAGIYKPADEPPHV--EGDVVKPDAGH----VQVEKYISENFSN-------WASFRPQY 232
SS+ IY EP + E D P + + V EK ++ ++ + +FR
Sbjct: 112 SSSEIYGDG-EPGRIFREQDEPAPRSAYGRSKVAGEKLMAAAAASPEGARLSYTAFRLFN 170
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPI-PGSGMQFTNIAHVRDLSSMLTLAVENPE----A 287
G G D F R + P+ G G+Q + D+++ + A+E A
Sbjct: 171 AYGPGQRADFVVPAFCRAALQGEAPVVHGDGLQTRTFTFIEDIAAAMVAALERRAPARAA 230
Query: 288 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 347
S +FNLVS+ +T+ +A+L +AG +++H D + + K F A+
Sbjct: 231 GSFEVFNLVSEETLTIASLAQLVCLSAGEQPQVIHRDHEDPSVGRSKRFEVSRR--VADN 288
Query: 348 RAAKDILGWRSTTNLPEDLKERFEE 372
A++ LG+R T L E ++ ++
Sbjct: 289 GKAREALGFRPATPLSEGVRRTLDD 313
>gi|254168016|ref|ZP_04874864.1| hypothetical protein ABOONEI_163 [Aciduliprofundum boonei T469]
gi|289595956|ref|YP_003482652.1| NAD-dependent epimerase/dehydratase [Aciduliprofundum boonei T469]
gi|197623059|gb|EDY35626.1| hypothetical protein ABOONEI_163 [Aciduliprofundum boonei T469]
gi|289533743|gb|ADD08090.1| NAD-dependent epimerase/dehydratase [Aciduliprofundum boonei T469]
Length = 285
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 33/215 (15%)
Query: 172 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISENFS------ 223
++A+ V+QF++ISSA +Y EP ++ D P + K E +S
Sbjct: 87 EYARKYDVEQFIYISSAAVY---GEPKYLPIDERHPTGPKSPYGLSKLTGERYSLLYSEL 143
Query: 224 ---NWASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS 275
AS RP + + + F R + P+ I G G Q + +V+D+
Sbjct: 144 YGLKVASIRPFNIFSPRQDPNSPYSGVISIFVSRAKKGLPLIIYGDGEQTRDFVNVQDVV 203
Query: 276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
++ LA+ + ++N + + +++ +AK+ A+ +G ++IVH P+ D +K+
Sbjct: 204 HLVKLALAK---KADGVYNCGTGKETSINELAKIIAELSGKGIKIVHDKPREG--DIRKS 258
Query: 336 FPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 370
YA+ A +I G+ TNL EDLK F
Sbjct: 259 --------YADISKAIEI-GYEPKTNLKEDLKNYF 284
>gi|223934764|ref|ZP_03626684.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514]
gi|223896719|gb|EEF63160.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514]
Length = 329
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 179 VKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYIS---ENFS-NWASFRP 230
VK F+F SS +Y A + P +E V +P+ VE ++ E F N+ FRP
Sbjct: 109 VKCFVFTSSIAVYG-AGQVPMIESMVPRPEDPYGISKFAVEMDLAAAHEMFGLNYIIFRP 167
Query: 231 QYMIGSGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
+ G N ++ F ++I+RK P+ I G GMQ +H+ DL+ + +V+
Sbjct: 168 HNVYGENQNIGDKYRNVIGIFMNQIMRKEPMTIFGDGMQTRAFSHIDDLAPQIARSVK-V 226
Query: 286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 345
A + I N+ +D+ +++ +A + + A G+ I + P+ H Y+
Sbjct: 227 RKAYNEIINIGADKPYSVNELAYVVSSAFGVSPRIKYLTPRN-----------EVQHAYS 275
Query: 346 EPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKA 382
AK I G S +L + + + +K+G + A
Sbjct: 276 NHDKAKKIFGRGSGVSLEKGVGRMAQWALKVGARRSA 312
>gi|156740225|ref|YP_001430354.1| NAD-dependent epimerase/dehydratase [Roseiflexus castenholzii DSM
13941]
gi|156231553|gb|ABU56336.1| NAD-dependent epimerase/dehydratase [Roseiflexus castenholzii DSM
13941]
Length = 334
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 14/141 (9%)
Query: 240 KDCEEWFF----DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
KD + F R++ + P+ + G G Q + +V D+ + LA +P AA IFNL
Sbjct: 197 KDARQTFLGIWIKRLIDEEPIQVFGDGSQIRDFNYVDDVVEAMLLAGASP-AADGGIFNL 255
Query: 296 VSDRAVTLDGMAKLCAQA-AGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 354
SD + L +A L + G EIV + P ID +YA+ R + L
Sbjct: 256 GSDETINLRDLAALLVEINGGGSFEIVPFPPDRKVIDIGD--------YYADYRMIQGRL 307
Query: 355 GWRSTTNLPEDLKERFEEYVK 375
GWR +L E L+ E Y +
Sbjct: 308 GWRPKVSLREGLRRTLEFYRR 328
>gi|367469600|ref|ZP_09469343.1| UDP-glucose 4-epimerase [Patulibacter sp. I11]
gi|365815321|gb|EHN10476.1| UDP-glucose 4-epimerase [Patulibacter sp. I11]
Length = 464
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 14/130 (10%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F R R P+ I GSG Q + +V DL+ + A+ P+AA +NL SD T+ G
Sbjct: 189 FVGRARRGEPLTIAGSGEQERSFVYVEDLAEGVVRAL-APQAAGRT-YNLGSDETTTIRG 246
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
+A++ PVEIVH + +A + + RN A D LGWR++T L E
Sbjct: 247 LAEVVRDVVA-PVEIVHTEGRAGDL---RGTTIRNQR-------AADELGWRASTPLREG 295
Query: 366 LKERFEEYVK 375
++ R+ +V+
Sbjct: 296 VR-RYAAWVE 304
>gi|148263747|ref|YP_001230453.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4]
gi|146397247|gb|ABQ25880.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4]
Length = 309
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 133/313 (42%), Gaps = 48/313 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM--TVGDENSDKMKKPPFNRF-----NEIVSA---- 132
+GG IG L K+LL GHEVT++ + S+ P +++V A
Sbjct: 6 TGGAGFIGSNLVKQLLKDGHEVTVLDNLLSGYRSNIATFPEVCLIEGDIRDDVVVAEAMK 65
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
G + V+ A VGN + D + + N+ + + A+ G+++ + SSAGI+
Sbjct: 66 GVEVVFHLAASVGN---KRSIDHPILDAEINVIGTLKILEAARKFGIRKIVASSSAGIFG 122
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP------QYMIGSGNNKDCEEW- 245
P E V+PD+ + + + + ++A +Y G N+ + +
Sbjct: 123 ELKTLPIKEDHPVEPDSPYGSTKLCMEKECLSYAKLYDLEAVCLRYFNVYGLNQRFDAYG 182
Query: 246 -----FFDRIVRKRPVPIPGSGMQFTNIAHVRD-----LSSMLTLAVENPEAASSNIFNL 295
F +++R P+ I G G Q + VRD + + +TL V S FN+
Sbjct: 183 NVIPIFAYKMLRGEPLTIFGDGEQTRDFLDVRDVVQANIKAAMTLGV-------SGAFNI 235
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILG 355
S +T++ + +L + A+ + + H P+ P MH A+ RAA +
Sbjct: 236 ASGSRITINRLVELLSAASAINPLVQHGPPR----------PGDVMHSLADIRAAHEAFD 285
Query: 356 WRSTTNLPEDLKE 368
+ NL + L+E
Sbjct: 286 FTPEINLEDGLRE 298
>gi|409356804|ref|ZP_11235191.1| dTDP-glucose 4-epimerase [Dietzia alimentaria 72]
Length = 312
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 128/327 (39%), Gaps = 59/327 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--- 140
+GG IG L LL GHEVT++ D + + AG + V+
Sbjct: 6 TGGAGFIGSTLVDRLLAEGHEVTVV-------DDLSRGRLENLESARGAGNRFVFHQLGL 58
Query: 141 --PAEVGNVVG----GVTF-------------DVVLDNNGKNLDAVRPVADWAKSSGVKQ 181
PA +G++V V F D V D + VR +A+ A+ +GV++
Sbjct: 59 TSPA-IGDLVAEARPEVIFHLAAQIDVRLSVEDPVHDAQVNVVGTVR-LAEAARRAGVRR 116
Query: 182 FLFISSAG-IYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSN-----WASFRPQ 231
+F SS G IY P E P E V P AG V E Y+ E FS WA P
Sbjct: 117 IVFTSSGGSIYGPVTELPVAESQPVDPLSPYAAGKVAGEIYL-EMFSRLYGIEWAGVAPA 175
Query: 232 YMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
+ G + E F R++ +P + G G + V D+ A PEA
Sbjct: 176 NVYGPRQDPHGEAGVVAIFSQRLLAGQPTRVFGDGGNTRDYVFVDDVVDAFVRAARVPEA 235
Query: 288 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF-PFRNMHFYAE 346
A FN+ + + G+ L AQAAG + Y P G A+ A FR
Sbjct: 236 AGLR-FNVGTGVETSDRGLHTLVAQAAG-AADDPEYAPARLGDVARSALDAFR------- 286
Query: 347 PRAAKDILGWRSTTNLPEDLKERFEEY 373
A ++LGW + E + E +
Sbjct: 287 ---AAEVLGWEPKVPISEGVARTVEYF 310
>gi|289577898|ref|YP_003476525.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter italicus
Ab9]
gi|289527611|gb|ADD01963.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter italicus
Ab9]
Length = 288
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 103/218 (47%), Gaps = 29/218 (13%)
Query: 170 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF------- 222
+ + + SGVK+ ++ SSA +Y + P EG + P + + + K+ +E++
Sbjct: 69 LLECCRKSGVKKVIYASSAAVYGNPEYLPIDEGHRINPISSY-GISKHTAEHYFEVYSQL 127
Query: 223 --SNWASFRPQYMIGSGNNKDCE----EWFFDRIVR-KRPVPIPGSGMQFTNIAHVRDLS 275
+ R + G + E F D++++ KRPV I G G Q + +V+D++
Sbjct: 128 YDLKYTILRYANVYGIRQDPKGEGGVISIFTDKMLKGKRPV-IFGDGNQTRDFVYVKDVA 186
Query: 276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
LA+E + + N+ +++ +++ + ++ + +E ++ +P+ I
Sbjct: 187 KANLLALER---GDNEVVNISTNKPTSINELVEIMNKIMNTSLEPIYTEPRKGDI----- 238
Query: 336 FPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 373
+H Y + + A D++GWR +L + L+E E Y
Sbjct: 239 -----VHSYLDNKKALDVIGWRPEYSLEDGLREIIEYY 271
>gi|441150189|ref|ZP_20965455.1| NAD-dependent epimerase/dehydratase [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440619336|gb|ELQ82386.1| NAD-dependent epimerase/dehydratase [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 322
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 106/260 (40%), Gaps = 32/260 (12%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG + +G + ++ L +G EVT+ G N D F R ++ G GD
Sbjct: 7 GGTSFVGRAIVEDALRTGAEVTLFGRGRTNPDL-----FPRLTRLI---GDRDTGD---- 54
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
+ +D V+D +G V D A V ++LFISS +Y+ P + D
Sbjct: 55 HTALRAGAWDAVVDVSGYVPRHVGQAMD-ALGDRVGRYLFISSHAVYERTGLAPGSDEDT 113
Query: 205 -VKPDAGH-------------VQVEKYISENFSNWASF-RPQYMIGSGNNKDCEEWFFDR 249
+P H V E ++ + A+ RP + G ++ D ++ R
Sbjct: 114 PRRPPVRHTEELSEATYGPLKVACEDDVTARYGARATIVRPGKVAGPHDSMDTFTYWVRR 173
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD-RAVTLDGMAK 308
R V +PG Q + RDL+ ++ + + + F V TL G+ +
Sbjct: 174 AARGGRVALPGDPEQPVQVVDSRDLARLVVRLITDDRPGA---FQAVGPAEPTTLGGLIR 230
Query: 309 LCAQAAGLPVEIVHYDPKAA 328
CA+AAG VEIV P+ A
Sbjct: 231 TCARAAGTEVEIVPVPPEGA 250
>gi|302389089|ref|YP_003824910.1| NAD-dependent epimerase/dehydratase [Thermosediminibacter oceani
DSM 16646]
gi|302199717|gb|ADL07287.1| NAD-dependent epimerase/dehydratase [Thermosediminibacter oceani
DSM 16646]
Length = 309
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 128/320 (40%), Gaps = 51/320 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G + ++L G+ I+T + D + RF E + + V+ A+
Sbjct: 10 AGHKGLVGSAILRKLQAEGYS-NIVTRTHQELDLTNQQEVYRFFE--TERPEYVFLAAAK 66
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEP---PH 199
VG ++ T+ V +NL + D A GVK+ LF+ S+ IY K A +P H
Sbjct: 67 VGGILANSTYPAVFIR--ENLLIQTNIIDAAYRYGVKKLLFLGSSCIYPKFAPQPIKEEH 124
Query: 200 VEGDVVKPD---------AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE------- 243
+ ++P G + Y + +N+ S P + G G+N D E
Sbjct: 125 LLTGALEPTNEPYAIAKIVGIKMCQAYNKQYGTNFISVMPTNLYGPGDNFDLETSHVLPA 184
Query: 244 --EWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
F + V P V + GSG HV DL+ + N + SS I N+ +
Sbjct: 185 LIRKFHEAKVAGAPHVVVWGSGTPRREFLHVDDLADACLFLMNNYD--SSEIINIGVGKD 242
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LG 355
+T+ +A L + G EIV K G PR D+ LG
Sbjct: 243 LTIAELANLIKEIVGYKGEIVFDTSKPDG----------------TPRKLLDVSKLFNLG 286
Query: 356 WRSTTNLPEDLKERFEEYVK 375
WR L + ++ +E Y++
Sbjct: 287 WRPRIRLEDGIRSTYEWYMQ 306
>gi|448501408|ref|ZP_21612198.1| NAD-dependent epimerase/dehydratase [Halorubrum coriense DSM 10284]
gi|445695200|gb|ELZ47310.1| NAD-dependent epimerase/dehydratase [Halorubrum coriense DSM 10284]
Length = 330
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 126/321 (39%), Gaps = 46/321 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEIVSAGGKTVWG 139
GG IG + +ELL +EV I G+ + D++ +R +E K
Sbjct: 9 GGTRFIGRHTVEELLAHDYEVAIFNRGNHENPFADDDRVTHVEGDRKDETALRAAKL--- 65
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH 199
+V V D V A AD V +++ISS Y A+E P
Sbjct: 66 ------SVEPNVVVDCVAYQPADVETATEIFAD------VDGYVYISSGSSYA-AEEIPK 112
Query: 200 VEGDVVKPDAGHVQVEKYISENFSNW------------------ASFRPQYMIGSGNNKD 241
EG+ Q E + N + RP + G + +
Sbjct: 113 REGETPLEPCTDEQAVDDSHETYGNRKAEGDRAVFAAAEEGVAATAVRPCIVYGPHDYTE 172
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR++ V +PG G + A+V D++S L +A E E ++ +N+ RA+
Sbjct: 173 RLDYWIDRVLTHDRVVVPGDGQNLWHRAYVEDVASALRIAAERGEPGAA--YNVGDRRAL 230
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS 358
TL + A AA + E+V AAG++ +R + A D LGW S
Sbjct: 231 TLRETLETIADAADVECEVVPASDDALAAAGLEPDDFVLYREYPHLLDTCALAD-LGWES 289
Query: 359 TTNLPEDLKERFEEYVKIGRD 379
T + E ++ EE+ + RD
Sbjct: 290 TP-VDEAMERTVEEHRESDRD 309
>gi|312200682|ref|YP_004020743.1| NAD-dependent epimerase/dehydratase [Frankia sp. EuI1c]
gi|311232018|gb|ADP84873.1| NAD-dependent epimerase/dehydratase [Frankia sp. EuI1c]
Length = 377
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 126/319 (39%), Gaps = 44/319 (13%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG ++ LL +GHEV + + +D ++ + G D
Sbjct: 6 TGGSGFIGAHVVDRLLDAGHEVRALDLAVNGADTRADHRVVDVLDLEAVAGAFDGCDA-- 63
Query: 144 VGNVVGGVTFDVVL-DNNGK---NLDAVRPVADWAKSSGVKQFLFISSAGIYKP---ADE 196
V ++ G D+ D G N++ V + A+ +GV++ LF S+ +Y AD
Sbjct: 64 VFHIAGMSNVDLAFADPVGTVRLNVEGTGNVCEAARRTGVRRVLFASTVWVYGAVPDADG 123
Query: 197 PPHVE---GDVVKPD-------AGHVQVEKYISENFSNWASFRPQYMI-----------G 235
P V G+ + D AGH+ ++ S+R Y + G
Sbjct: 124 RPEVGAAGGESLTEDSVIELGRAGHIYTSTKLAAELL-LHSYRETYGLPFTILRYGIPYG 182
Query: 236 SGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
G + F R V P+ + G G QF +VRDL+ A+ P A + I
Sbjct: 183 PGMRDELVLARFVARAVAGEPLTVAGDGRQFRRYVYVRDLADAHVRALTAPAAENETIAL 242
Query: 295 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 354
++R LD + A G+ +E V P +R AE RAA+ +L
Sbjct: 243 EGAERISVLDMAEAVRAHFPGVEIEHVPARPG----------DYRGREVSAE-RAAR-LL 290
Query: 355 GWRSTTNLPEDLKERFEEY 373
WR TT + +++ E Y
Sbjct: 291 DWRPTTTFHDGVRQYVEWY 309
>gi|448537773|ref|ZP_21622642.1| NAD-dependent epimerase/dehydratase [Halorubrum hochstenium ATCC
700873]
gi|445701733|gb|ELZ53706.1| NAD-dependent epimerase/dehydratase [Halorubrum hochstenium ATCC
700873]
Length = 330
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 126/319 (39%), Gaps = 42/319 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + ELL +EV I G+ + PF + + G D +
Sbjct: 9 GGTRFIGRHTVDELLAHDYEVAIFNRGN------HEDPFAEDDRVTHVEGDR--KDETAL 60
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHVE 201
V DVV+D A +P A + + V +++ISS Y A+E P E
Sbjct: 61 RAAKLSVEPDVVIDCV-----AYQPADVEAATEIFADVDGYVYISSGSSYA-AEEIPKRE 114
Query: 202 GDVVKPDAGHVQVEKYISENFSNWAS------------------FRPQYMIGSGNNKDCE 243
G+ Q E + N + RP + G + +
Sbjct: 115 GETPLEPCTDEQATDDSHETYGNRKAEGDRAVFAAAEEGVAAMAVRPCIVYGPHDYTERL 174
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
+++ DR++ + IPG G + A+V D++S L + E E ++ +N+ RA+TL
Sbjct: 175 DYWIDRVLTHDRLVIPGDGQNLWHRAYVEDVASALRIVAERGEPGAA--YNVGDRRALTL 232
Query: 304 DGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
+ A AAG+ E+V A G++ +R + A D LGW ST
Sbjct: 233 RETVETIADAAGVEAEVVAASDDALAAGGLEPDDFTLYREYPHLLDTCALAD-LGWESTP 291
Query: 361 NLPEDLKERFEEYVKIGRD 379
+ E + EE+ + RD
Sbjct: 292 -IDESMARTVEEHRESDRD 309
>gi|148272880|ref|YP_001222441.1| putative nucleoside-diphosphate-sugar epimerase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
gi|147830810|emb|CAN01751.1| putative nucleoside-diphosphate-sugar epimerase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 321
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 137/320 (42%), Gaps = 30/320 (9%)
Query: 79 IVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTV 137
+V + GH IG +L L+ SGH+V ++ G + + P ++R + V +
Sbjct: 3 VVVIGATGH--IGTFLVPRLVESGHDVVAVSRGTREPYR-ESPLWDRVERVRVDRDAEDA 59
Query: 138 WGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP 197
G A + + ++ +VV+D ++ R + + + V+ + I S + +
Sbjct: 60 AGTFA---DRIAALSPEVVVDLVCFTPESARHLVEGLRGR-VRHLVHIGSIWTHGLSTSL 115
Query: 198 PHVEGDVVKPDAGH----VQVEKY-ISENFSN---WASFRPQYMIGSG-------NNKDC 242
P E D +P + ++E+Y I+E+ S P ++ G G N D
Sbjct: 116 PLREDDPKEPFGEYGVQKAEIERYLIAESRSGGVPCTVVHPGHISGGGWPVITPVGNLDP 175
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
W + P+ +PGSG + + H D++ ++ LA+ N E + F+ VSDRA++
Sbjct: 176 AVWTA--LATGGPLAVPGSGSETMHHVHADDVAQVVQLAIANRETSVGESFHAVSDRALS 233
Query: 303 LDGMAKLCAQAAGLPVEIVHYD-----PKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWR 357
+ G A+ A G E+ H D + A ++ + A A+D+LG+
Sbjct: 234 VRGFARAAAAWFGREPELEHLDWDGFRARTEPDHADASWEHLSRSHVASIDKARDVLGYS 293
Query: 358 STTNLPEDLKERFEEYVKIG 377
E +E E V+ G
Sbjct: 294 PRFTSEEAAREAVEWMVRAG 313
>gi|354611937|ref|ZP_09029889.1| NAD-dependent epimerase/dehydratase [Halobacterium sp. DL1]
gi|353191515|gb|EHB57021.1| NAD-dependent epimerase/dehydratase [Halobacterium sp. DL1]
Length = 329
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 134/339 (39%), Gaps = 48/339 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L +ELL + VT T G+ + PF + + V GD +
Sbjct: 8 GGTRFIGRHLVEELLAHDYRVTTFTRGNHDD------PFAEDDRVAH-----VEGDRTDR 56
Query: 145 GNVVGG---VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP-PHV 200
+++ V D V DN V D + V ++++SS Y DE P
Sbjct: 57 KDLLAAKREVDPDAVFDNVAYKPRDVESATDI--FADVDAYVYVSSGAAY--GDEAVPKR 112
Query: 201 EGDVVKPDAGHVQVEK------------------YISENFSNWASFRPQYMIGSGNNKDC 242
EG+ Q +E N + RP + G ++ +
Sbjct: 113 EGETALETCTAEQATDDSPASYGARKAAGDRIVFEAAERGVNAMAVRPPVVYGPHDHTER 172
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
++ DR+ + +PG G +V D++ L L E E +N+ AVT
Sbjct: 173 LAYWVDRVAEHDELVVPGDGTNLWQRVYVEDVAQGLRLVAE--EGDPGEAYNVGDRNAVT 230
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPKAAGID--AKKAFP-FRNM-HFYAEPRAAKDILGWRS 358
LD + L A A G VE + P+ I + FP +R+ H + + A+ LG+ S
Sbjct: 231 LDRLLDLIADALGTDVERAYTSPRELSIVDLSPDDFPLYRDYPHMLSTAKVAE--LGYES 288
Query: 359 TTNLPEDLKERFEEYVKIGR--DKKAMQFEIDDKILESL 395
T L E ++ E + GR D + E ++++L+ L
Sbjct: 289 TP-LDEAMERTVEAHRANGRTGDDQGPDREAEERLLDVL 326
>gi|395645323|ref|ZP_10433183.1| NAD-dependent epimerase/dehydratase [Methanofollis liminatans DSM
4140]
gi|395442063|gb|EJG06820.1| NAD-dependent epimerase/dehydratase [Methanofollis liminatans DSM
4140]
Length = 311
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 90/225 (40%), Gaps = 26/225 (11%)
Query: 157 LDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG---DVVKPDAGHVQ 213
L + NL V A+ GV++ + SSA +Y E P E D++ P A
Sbjct: 85 LATHAVNLTGTLNVLIAARDCGVRKVVMASSAAVYGENPELPKREEMAPDLLSPYAAQKL 144
Query: 214 VEKYISENFSNWASFRP---QYMIGSGNNKD-------CEEWFFDRIVRKRPVPIPGSGM 263
+++ + FS +Y G +D F RI+ P+ I G G
Sbjct: 145 SDEHYAAVFSRLYGLSTVCLRYFNVFGPRQDPSSPYSGVISIFASRILNGDPIAIHGDGG 204
Query: 264 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY 323
Q + +VRD+ A+ + + +FN+ L+ +A+ QAAG V I +
Sbjct: 205 QTRDFVYVRDVVQANLRAMASD---AEGVFNIARGEQTDLNTLARSMMQAAGQEVAIRYG 261
Query: 324 DPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 368
P+ I H AE A+++LGWR + E L E
Sbjct: 262 PPRGGDI----------RHSLAEISRAREVLGWRPEFTIQEGLAE 296
>gi|163847195|ref|YP_001635239.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus
J-10-fl]
gi|222525035|ref|YP_002569506.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl]
gi|163668484|gb|ABY34850.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus
J-10-fl]
gi|222448914|gb|ACM53180.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl]
Length = 337
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 133/336 (39%), Gaps = 58/336 (17%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K++L+ +GG IG L +L +GH V ++ D + + A
Sbjct: 4 KRILV----TGGAGFIGSELVTQLAAAGHRVVVV-------DNLVNGKRANLAHLADADV 52
Query: 135 KTVWGDPAE---VGNVVGGVTFDVVL-------------DNNGKNLDAVRPVADWAKSSG 178
+ V D + + +V GV L +N+ N + D A+ +
Sbjct: 53 ELVEVDIRQREVIARLVQGVEIVYHLACLGVRHSLHDPFENHDVNATGTLILLDLARRAD 112
Query: 179 VKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSNWASFR-PQYM 233
V +F+++SS+ +Y A P E P G + E Y + W S+R P +
Sbjct: 113 VPRFVYVSSSEVYGTARWVPMTEEHPTYPMTVYGGGKLAGECYTR---AFWESYRYPTVV 169
Query: 234 I-----------GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV 282
+ G++ + F R + P+ I G G Q + +V D + + LA
Sbjct: 170 VRPFNSFGPRSHHEGDSGEVIPKFMLRAMAGLPMVIFGDGTQTRDFTYVSDTARGIMLA- 228
Query: 283 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD-PKAAGIDAKKAFPFRNM 341
+AA FNL R ++++ +A+ A G P + YD P+ P +
Sbjct: 229 GMVDAAIGGTFNLGQGREISINELARTVATVVGRPDAAIVYDIPR----------PGDVL 278
Query: 342 HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG 377
YA+ A+ +LG+ T +L E L+ E Y+ G
Sbjct: 279 RLYADSTRAQHVLGFTPTVSLQEGLQRLQEWYLSRG 314
>gi|448312943|ref|ZP_21502675.1| NAD-dependent epimerase/dehydratase [Natronolimnobius
innermongolicus JCM 12255]
gi|445599789|gb|ELY53813.1| NAD-dependent epimerase/dehydratase [Natronolimnobius
innermongolicus JCM 12255]
Length = 329
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 118/298 (39%), Gaps = 39/298 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L ELL + ++VT++ G ++ PF+ + G E
Sbjct: 8 GGTRFIGRHLVAELLEADYDVTLLNRG------TRENPFDADERVSHVEGDRTNDSALES 61
Query: 145 GNVVGGVTFDVVLDN---NGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE 201
+ V D V D + K++ A + D + ++++SS Y +E P E
Sbjct: 62 AAMT--VDPDAVFDCVAYHPKDVRAATRIFD-----DCEAYVYVSSGAAYG-REEIPKRE 113
Query: 202 G-------------DVVKPDAGHVQVEK-----YISENFSNWASFRPQYMIGSGNNKDCE 243
G D G+ + E +EN S RP + G + +
Sbjct: 114 GETPLEACTADQAVDETGATYGNRKAEGDRAVFAAAENGVRAMSVRPPIVYGPHDYTERL 173
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
+W+ DR+ R V +PG G + +V D++S L + E +A + +N+ R VTL
Sbjct: 174 DWWIDRVDRFDRVLVPGDGTNVRHRVYVEDVASALRIVAERGDAGEA--YNVGDRRLVTL 231
Query: 304 DGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRST 359
M L A V++V P+ AG +P + + A LGW ST
Sbjct: 232 AEMVDLVADQLDAAVDVVTAGPRELEAGEIELDDYPLYRAYPHVLSTAKLAALGWEST 289
>gi|160894109|ref|ZP_02074887.1| hypothetical protein CLOL250_01663 [Clostridium sp. L2-50]
gi|156864142|gb|EDO57573.1| NAD dependent epimerase/dehydratase family protein [Clostridium sp.
L2-50]
Length = 324
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 129/331 (38%), Gaps = 41/331 (12%)
Query: 57 SRRSSVSAFTVKASAAEK----KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD 112
R + K AAEK KK+LI +GG + Y AK + G+EV ++
Sbjct: 4 CRCKQLGGLISKPCAAEKEISMKKILI----TGGTTFVSKYAAKYFVEHGYEVYVV---- 55
Query: 113 ENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVAD 172
NR ++ G + D +G+ + + FDVV D + + + D
Sbjct: 56 -----------NRNSKPQVKGVTLIESDRHNLGDKLKNLHFDVVADITAYD---AQDIID 101
Query: 173 WAKS-SGVKQFLFISSAGIYK-------PADEPPHVEGDVVKPDAGHVQVEKYISENFSN 224
S Q++ ISS+ +Y P D V K ++ E + E +
Sbjct: 102 LHNSLDSFDQYIMISSSAVYPEYGVQPFPEDSERAVNKFWGKYGTDKIEAENALLERVPD 161
Query: 225 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP Y+ GS +N E + FD + R +P +G HV DL ++ + +
Sbjct: 162 AYILRPPYLYGSMDNVYREAFVFDCAMADRKFYLPEAGEMKLQFFHVEDLCRLMEVII-- 219
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFY 344
+ + +I N+ +++++++ C E V ++ + F F N +
Sbjct: 220 TKCPTDHILNVGNEKSISIRDWVIKCYACFDKVPEFV---SVPETVEQRNYFSFYNYEYC 276
Query: 345 AEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
+ K I + T ++ L+E Y++
Sbjct: 277 LDVTRQKKI--YPETMSMDAGLQEAANWYIE 305
>gi|86738942|ref|YP_479342.1| NAD-dependent epimerase/dehydratase [Frankia sp. CcI3]
gi|86565804|gb|ABD09613.1| NAD-dependent epimerase/dehydratase [Frankia sp. CcI3]
Length = 327
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 135/321 (42%), Gaps = 55/321 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI----VSAGGKTVWG 139
+GG IG ++ LL +GH+V + V D + + + + V+A + V
Sbjct: 8 TGGSGFIGSHVVDRLLDAGHDVLSLDVEHRPVDP--RASYQHLDVLDLPAVTAALRGV-- 63
Query: 140 DPAEVGNVVGGVTFDVVLDNNGK----NLDAVRPVADWAKSSGVKQFLFISSAGIY---- 191
V ++ G D + + N++ + + A+ GV++ LF S+ +Y
Sbjct: 64 --EAVFHIAGMSNVDFAFADPVRTVRLNVEGTGNICEAARQVGVRRVLFASTVWVYGAVG 121
Query: 192 -KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI-----------GSGNN 239
+ P + ++ AGHV ++ S++ Y + G G
Sbjct: 122 DRAGSAPLTEDAEITLGRAGHVYTSTKLAAELL-LHSYQQTYGLPFTILRYGIPYGPGMR 180
Query: 240 KDCEEWFFDRIVRK----RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
+E R VRK + + G G+QF N VRDL+ LA+ P+AA++ + L
Sbjct: 181 ---DELVLARFVRKALNGESLTVAGDGLQFRNYVFVRDLAEAHVLAL-TPDAANTTL-AL 235
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP--FRNMHFYAEPRAAKDI 353
+V++ MA+ + Y P A I+ A P FR A+ RAA ++
Sbjct: 236 EGSESVSVLEMARAVQE----------YFPGTA-IEHMPARPGDFRGREISAQ-RAA-EV 282
Query: 354 LGWRSTTNLPEDLKERFEEYV 374
LGWR TT E +++ E Y+
Sbjct: 283 LGWRPTTPFSEGVRQYIEWYL 303
>gi|313127087|ref|YP_004037357.1| nucleoside-diphosphate-sugar epimerase [Halogeometricum borinquense
DSM 11551]
gi|448288445|ref|ZP_21479644.1| nucleoside-diphosphate-sugar epimerase [Halogeometricum borinquense
DSM 11551]
gi|312293452|gb|ADQ67912.1| nucleoside-diphosphate-sugar epimerase [Halogeometricum borinquense
DSM 11551]
gi|445569596|gb|ELY24168.1| nucleoside-diphosphate-sugar epimerase [Halogeometricum borinquense
DSM 11551]
Length = 330
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 123/316 (38%), Gaps = 36/316 (11%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + ++LL G+ V I G+ + PF + + G D ++
Sbjct: 9 GGTRFIGRHTVEDLLDHGYAVAIFNRGNHEN------PFADDDRVTHVEGDR--KDEMDL 60
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
+ D+V+D V D + V +++ISS Y +E P EG+
Sbjct: 61 KAAKLSIEPDIVIDCVAYQPADVEAAVD--IFADVDAYVYISSGAAYG-REEIPKREGET 117
Query: 205 VKPDAGHVQVEKYISENFS------------------NWASFRPQYMIGSGNNKDCEEWF 246
D Q ++ N S RP + G + + +++
Sbjct: 118 PLCDCTPEQAASDSDASYGPRKAEGDRIVFDAAMDGVNAMSIRPCIVYGPDDYTERLDYW 177
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
R+ V +PG G + A+V+D++S L + E S +N+ R VTL+ M
Sbjct: 178 IHRVETYDRVVVPGDGTNVWHRAYVKDVASALRVVAERGTPGES--YNVGDRRLVTLEEM 235
Query: 307 AKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLP 363
+ A AA VE+VH + AAG++ +R + D LGW ST L
Sbjct: 236 VECIADAADTSVEVVHAGERELAAAGLEPDDFILYREYPHVLDTNKLAD-LGWDSTP-LD 293
Query: 364 EDLKERFEEYVKIGRD 379
E + ++Y RD
Sbjct: 294 EAMAVSVDDYRDSDRD 309
>gi|291302750|ref|YP_003514028.1| NAD-dependent epimerase/dehydratase [Stackebrandtia nassauensis DSM
44728]
gi|290571970|gb|ADD44935.1| NAD-dependent epimerase/dehydratase [Stackebrandtia nassauensis DSM
44728]
Length = 321
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 31/247 (12%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN-----RFNEIVSAGGKTVWG 139
GG +G +L L+ +GHEVT+++ G ++ P+ RF VSA +
Sbjct: 7 GGTGHVGTFLVPRLVTAGHEVTVVSRG-------QRQPYRPHGAWRFVTTVSAD-RQAEE 58
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH 199
D G + + DVV+D D+ R + + A + V+ FL + +Y P+ + P
Sbjct: 59 DAGTFGARIAALEPDVVIDMICFEPDSARQLVE-ALAGRVRHFLHCGTIWVYGPSAQVPG 117
Query: 200 VEGD----VVKPDAGHVQVEKYISENFSNWA----SFRPQYMIGSG-------NNKDCEE 244
E + + ++E Y+ + P ++ G G N + +
Sbjct: 118 TEEQPRRAITEYGRKKAEIEAYLLDQAQRHGFPATVIHPGHISGPGWTPINPAGNLNLD- 176
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
F ++ + +P GM+ H D++ + A+ N AA FN V+ A+TL
Sbjct: 177 -VFQKLADGDTLMLPNLGMETLQHVHADDVAQVFGAAIANRSAALGESFNAVAATALTLR 235
Query: 305 GMAKLCA 311
G A+ A
Sbjct: 236 GYAEAAA 242
>gi|448419875|ref|ZP_21580719.1| nucleoside-diphosphate-sugar epimerase [Halosarcina pallida JCM
14848]
gi|445674789|gb|ELZ27326.1| nucleoside-diphosphate-sugar epimerase [Halosarcina pallida JCM
14848]
Length = 330
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 132/319 (41%), Gaps = 42/319 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + ++LL G+EV I G+ + PF + G D ++
Sbjct: 9 GGTRFIGRHAVEDLLDHGYEVAIFNRGNHEN------PFADDERVTRVEGDRT--DDTDL 60
Query: 145 GNVVGGVTFDVVLDNNG---KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE 201
V DVV+D +++A + S V +++ISS Y +E P E
Sbjct: 61 KTAKLSVEPDVVIDCVAYYPADVEAAVEI-----FSDVDAYVYISSGAAYG-REEIPKRE 114
Query: 202 GDV----VKPDAG-----------HVQVEKYISENFS---NWASFRPQYMIGSGNNKDCE 243
G+ PD + ++ + E + N S RP + G + +
Sbjct: 115 GETPLCECTPDQAADDSDETYGPRKAEGDRIVFEAATEGVNAMSVRPCIVYGPHDYTERL 174
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
+++ +R+ + +PG G + A+V D++S L + E +N+ R TL
Sbjct: 175 DYWINRVEEYDRLVVPGDGTNLWHRAYVGDVASALRIVAER--GTPGEAYNVGDRRLATL 232
Query: 304 DGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
+ L A+AA V++VH + AAG+ +++ +R+ + D LGW ST
Sbjct: 233 EETVDLIAEAAEESVDVVHAGERELAAAGLASEEFVLYRDYPHVMDTNELAD-LGWESTP 291
Query: 361 NLPEDLKERFEEYVKIGRD 379
L E + +E+ K RD
Sbjct: 292 -LDEAMAATVDEHRKSDRD 309
>gi|406947731|gb|EKD78610.1| nad-dependent epimerase/dehydratase [uncultured bacterium]
Length = 316
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 131/333 (39%), Gaps = 58/333 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG +L + L+ +GH V + DE +D P F +N + P
Sbjct: 7 TGGAGFIGSHLVQSLIQAGHSVVNI---DELNDYYN-PEFKHYNL------AQLPRHPFY 56
Query: 144 VGNVVGGVTFDVVLDNNGKN----LDA---VRP------------------VADWAKSSG 178
GN+ V + N L A VRP + D A G
Sbjct: 57 QGNICDAALLHTVFQKHRINKVIHLGARAGVRPSIQQPQLYEAVNYGGTAQLVDIATQHG 116
Query: 179 VKQFLFISSAGIYKPADEPPHVEGDV----VKPDA-GHVQVEKYISENFSN----WASFR 229
++QF+F S++ +Y P E V + P A ++ E+Y+ E+ R
Sbjct: 117 IEQFIFGSTSAVYGNTASLPFTEEIVNLSPISPYAISKLKAERYLQEHHVRTDLPLTILR 176
Query: 230 PQYMIGSGNNKDCEEWFF-DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
+ G D + F + I+ ++P+ G G + ++ D+ + + AV+ P
Sbjct: 177 FFTVYGERGRPDMAPYLFTEAILHQQPIKKFGDGSTSRDYTYIADIIAGIVAAVQQP--F 234
Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPR 348
I NL + +AVTL+ QA G K A I+ A H A+
Sbjct: 235 DFEIINLGNSKAVTLNEFISTLEQATG----------KTAVIEQLPAQSGDVNHTLADVS 284
Query: 349 AAKDILGWRSTTNLPEDLKERFEEYVKIGRDKK 381
A+ +LG++ TT+L L++ YV RD +
Sbjct: 285 KAQRLLGYQPTTSLETGLRKFVGWYVAT-RDSR 316
>gi|392940483|ref|ZP_10306127.1| LOW QUALITY PROTEIN: nucleoside-diphosphate-sugar epimerase
[Thermoanaerobacter siderophilus SR4]
gi|392292233|gb|EIW00677.1| LOW QUALITY PROTEIN: nucleoside-diphosphate-sugar epimerase
[Thermoanaerobacter siderophilus SR4]
Length = 316
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 111/243 (45%), Gaps = 31/243 (12%)
Query: 156 VLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE 215
V D G L V + + + SGVK+ ++ SSA +Y + P E V P + +
Sbjct: 86 VFDAKGNVLGTVN-LLECCRKSGVKKIVYASSAAVYGNPEYLPIDEKHKVNP-ISYYGIS 143
Query: 216 KYISENF---------SNWASFRPQYMIGSGNNKDCE----EWFFDRIVR-KRPVPIPGS 261
K+ +E++ + R + G + E F D++++ +RP+ I G
Sbjct: 144 KHTAEHYFEVYRQLYGLKYTILRYANVYGIRQDPKGEGGVISIFTDKMLKGERPI-IFGD 202
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
G Q + +V+D+ LA+E + + N+ +++ +++ + ++ + +E V
Sbjct: 203 GNQTRDFVYVKDVVKANLLALER---GDNEVVNISTNKPTSINELVEMMNKIMNTSLEPV 259
Query: 322 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY-VKIGRDK 380
+ +P+ I +H Y + + A ++LGW+ +L E LKE E Y VK D+
Sbjct: 260 YTEPRKGDI----------VHSYLDNKKALEVLGWKPEYSLEEGLKETIEYYRVKYVEDE 309
Query: 381 KAM 383
A+
Sbjct: 310 VAV 312
>gi|398884435|ref|ZP_10639370.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM60]
gi|398194593|gb|EJM81662.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM60]
Length = 310
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 118/289 (40%), Gaps = 28/289 (9%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-------KT 136
+GG IG +L + LLG G+ V ++ + ++ K+ P N + G +
Sbjct: 9 TGGAGFIGSHLVEALLGKGYNVRVLD--NLSTGKVDNLPVGHANLDLMVGDVADAAVVEQ 66
Query: 137 VWGDPAEVGNVVGGVTFDVVLDN----NGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
D + V ++ + +D+ + N V + G+K+ +F SSA IY
Sbjct: 67 AMRDCSAVVHLAAVASVQASVDDPVGTHQSNFVGTLNVCEKMLKVGIKRVVFASSAAIYG 126
Query: 193 PADEPPHVEGDVVK----PDAGHVQVEKYISENFSNWASFRP---QYMIGSGNNKD---- 241
E ++ D K P A +Y + + P ++ G +D
Sbjct: 127 NNGEGSAIDEDTPKSPLTPYASDKLASEYYLDFYRREHGLEPVVLRFFNIFGPRQDPSSP 186
Query: 242 ---CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
F +R + ++PV I G G Q + V DL S+L AVE E ++S + N+
Sbjct: 187 YSGVISIFTERAISRKPVAIFGDGEQTRDFVFVEDLVSILVQAVETTEPSASAM-NVGLS 245
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 347
R+ +L+ + +A G P+ + + P+ I +A R + + P
Sbjct: 246 RSTSLNDLITELGRATGRPLTVTYQAPRRGDIRHSRANNARLLERFTLP 294
>gi|269926953|ref|YP_003323576.1| NAD-dependent epimerase/dehydratase [Thermobaculum terrenum ATCC
BAA-798]
gi|269790613|gb|ACZ42754.1| NAD-dependent epimerase/dehydratase [Thermobaculum terrenum ATCC
BAA-798]
Length = 305
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 74/169 (43%), Gaps = 16/169 (9%)
Query: 157 LDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK 216
LD + L A + V++ A +GVKQFLF S+ +Y A V D + G +
Sbjct: 83 LDASRDILVATKYVSEAAVRAGVKQFLFSSTFAVYGQA--SGLVTEDTPRAPIGMYGFLR 140
Query: 217 YISENFS---------NWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQF 265
SE+ N FR + G G K DR++ +P+ I G+GMQ
Sbjct: 141 TASEHLLLAAQKLDGLNVLIFRQTNIYGKGITKKNTLLNVLADRVLNHQPITIYGTGMQA 200
Query: 266 TNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA 314
N HV D LA+E ++ I+NL S +T+ +A + AA
Sbjct: 201 RNFLHVMDTVQAYKLAIEKQ---ATGIYNLGSTETLTVKTVADIVNDAA 246
>gi|389784009|ref|ZP_10195206.1| hypothetical protein UU7_14835 [Rhodanobacter spathiphylli B39]
gi|388433766|gb|EIL90725.1| hypothetical protein UU7_14835 [Rhodanobacter spathiphylli B39]
Length = 321
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 23/240 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG YL L+ GH+V ++ G S K + + E V+ +T
Sbjct: 8 GGSGHIGAYLIPALVEQGHDVVNVSRG--QSGKYRPHAAWQSVEQVTL-DRTAEERSGTF 64
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
+ + G+ D+V+D +L + + A V+ FL + +Y P EG+
Sbjct: 65 ASRMAGLRPDIVVDLISFDLPGTQSLVH-ALRGKVEHFLHCGTIWVYGHQPAIPVDEGEP 123
Query: 205 VKPDAGHVQVEKYISENFSNWAS---------FRPQYMIGSG-------NNKDCEEWFFD 248
V P G + K E + S FRP +++G G N D E F
Sbjct: 124 VNP-FGEYGINKAAIETWLLHESRRTGFPATVFRPGHIVGPGWAPIGPCGNLDVE--VFS 180
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
R+ R + +P G++ + H D++ + A+ N A+ FN+V+++A+ L G A+
Sbjct: 181 RMARGEEISLPNCGLETLHHVHADDIAQFVMRAIANRPASVGETFNVVAEKALNLRGYAE 240
>gi|358635412|dbj|BAL22709.1| hypothetical protein AZKH_0363 [Azoarcus sp. KH32C]
Length = 305
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 31/210 (14%)
Query: 181 QFLFISSAG-IYKPADEPPHVEGDVVKPD----AGHVQVEKYISE---NFSNWAS-FRPQ 231
+ L++SS G +Y A P E +++P AG E +IS FS+ A+ RP
Sbjct: 107 ELLYLSSGGTLYGDAGADPATEHHIIRPKSYYGAGKAAAEHFISAWTAQFSSRATILRPS 166
Query: 232 YMIGSGNNKDCEEWF------FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
+ G G + + F D ++ P+PI G G + ++ D + + P
Sbjct: 167 NLYGPG--QTIRQGFGIVPTALDAAMKGTPLPIWGDGSTVRDYLYIVDFIRLCLDILAAP 224
Query: 286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF--PFRNMHF 343
A + I N S V+L+ + G P+ HY P + +D + P R H
Sbjct: 225 MPAGTQIMNAASGHGVSLNELLAHIETVTGKPM-TRHYQPGRS-VDVSRIVLSPERAQHR 282
Query: 344 YAEPRAAKDILGWRSTTNLPEDLKERFEEY 373
Y GW +TT+LP L+ + Y
Sbjct: 283 Y----------GWSATTSLPTGLERTWAWY 302
>gi|290954895|ref|YP_003486077.1| oxidoreductase [Streptomyces scabiei 87.22]
gi|260644421|emb|CBG67506.1| putative oxidoreductase [Streptomyces scabiei 87.22]
Length = 323
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 105/243 (43%), Gaps = 23/243 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L L+ +GHEV ++ G + P + + ++V+ +
Sbjct: 7 GGSGHIGTFLVPRLVRAGHEVINISRGTRTA-YADAPEWRQVRQVVA--DREHEDREGVF 63
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
G+ V + D V+D L++ + + + V L + Y P+D+ P +
Sbjct: 64 GDRVAALNPDAVVDLVCFTLESATALVERLRGE-VGHLLHCGTLWRYGPSDKLP-ISETT 121
Query: 205 VKPDAGHVQVEKYI------SENFSNW---ASFRPQYMIGSG-------NNKDCEEWFFD 248
P G ++K + +E S S P +++G G N D W+
Sbjct: 122 GTPPVGEYGIQKDLIARMLKAETASGGLVTTSLHPGHIVGPGWDPVNPLGNNDPSVWYA- 180
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
+ RP+ IPG G++ + H D++ AVE+ EAA+ FN+V+ A+ + G A+
Sbjct: 181 -LSAGRPLRIPGIGVEPMHHVHADDVAQSFERAVEHREAAAGEDFNVVAPTALNVRGYAR 239
Query: 309 LCA 311
+ A
Sbjct: 240 IAA 242
>gi|254168150|ref|ZP_04874997.1| hypothetical protein ABOONEI_767 [Aciduliprofundum boonei T469]
gi|197622916|gb|EDY35484.1| hypothetical protein ABOONEI_767 [Aciduliprofundum boonei T469]
Length = 285
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 33/217 (15%)
Query: 170 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISENFS---- 223
+ ++A+ V+QF++ISSA +Y EP ++ D P + K E +S
Sbjct: 85 LLEYARKYDVEQFIYISSAAVY---GEPKYLPIDERHPTGPKSPYGLSKLTGERYSLLYS 141
Query: 224 -----NWASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRD 273
AS RP + + + F R + P+ I G G Q + +V+D
Sbjct: 142 ELYGLKVASIRPFNIFSPRQDPNSPYSGVISIFVSRAKKGLPLIIYGDGEQTRDFVNVQD 201
Query: 274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 333
+ ++ LA+ + ++N + + +++ +AK+ A+ +G ++IVH P+ I
Sbjct: 202 VVHLVKLALTK---NADGVYNCGTGKETSINELAKIIAELSGKDIKIVHDKPREGDIRKS 258
Query: 334 KAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 370
A+ + EP+ TNL EDLK F
Sbjct: 259 YAYISKAREIEYEPK-----------TNLKEDLKIYF 284
>gi|336179997|ref|YP_004585372.1| dTDP-glucose 4,6-dehydratase [Frankia symbiont of Datisca
glomerata]
gi|334860977|gb|AEH11451.1| dTDP-glucose 4,6-dehydratase [Frankia symbiont of Datisca
glomerata]
Length = 331
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 131/323 (40%), Gaps = 58/323 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG ++ L +GH+V + + +D +R ++++ T E
Sbjct: 6 TGGSGFIGAHVVDRLADAGHDVIALDLRTHRADPRAD---HRVLDVLNLPAVTSAFAGCE 62
Query: 144 VGNVVGGVT-----FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD--- 195
V + G++ F + N++ V + A+ +GV++ LF S+ +Y A
Sbjct: 63 VVFHLAGMSNVDHAFADPIRTVRLNVEGTANVCEAARVAGVRRVLFASTVWVYGAAGGDP 122
Query: 196 EPPH-----VEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI-----------GSGNN 239
+ PH VE +V+ AGHV I+ S++ Y + G G
Sbjct: 123 DDPHPLTEDVEFALVR--AGHVYTSTKIAAELL-LHSYQQTYGVDFTILRYGIPYGPGMR 179
Query: 240 KDCEEWFFDRIVRK----RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
+E R +RK P+ I G G QF N VRDL+ LA+ + +A + L
Sbjct: 180 ---DELVLARFLRKALDGEPLTIAGDGQQFRNYVFVRDLADAHVLALAD--SARNATIAL 234
Query: 296 VSDRAVTLDGMAKLCA-QAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP---RAAK 351
D V++ MA+ G+ +E V P R F P AA+
Sbjct: 235 EGDERVSVLAMAQAVRDHVPGVRIEHV---------------PARPGDFRGRPVSNAAAE 279
Query: 352 DILGWRSTTNLPEDLKERFEEYV 374
+LGW TT E +++ E Y+
Sbjct: 280 ALLGWHPTTRFAEGVRQYVEWYL 302
>gi|374308310|ref|YP_005054741.1| dTDP-glucose 4,6-dehydratase [Filifactor alocis ATCC 35896]
gi|291166638|gb|EFE28684.1| dTDP-glucose 4,6-dehydratase [Filifactor alocis ATCC 35896]
Length = 308
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 125/306 (40%), Gaps = 36/306 (11%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+L+ + G + +A+ + G+EV +M N + ++P G
Sbjct: 2 KKILV----TSGTVFVTRTIAEYYVKKGYEVYVM-----NRNTKEQP----------KGV 42
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+ D +G + +FDVV+D+ + V + D K+++ ISS+ +Y
Sbjct: 43 ILIQADRHHIGRKLRPYSFDVVIDH-AYTAEEVDLLLDALGEH--KEYILISSSAVYPED 99
Query: 195 DEPPHVEGDVVKPDA-------GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
P E V + ++ EK + + RP Y+ G NN E + F
Sbjct: 100 GIQPFTEECKVGENKFWGQYGINKIEAEKLLLNRNPSAYIVRPPYLYGPMNNVYRESFVF 159
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
D V R +P +G V D+ + ++ + S++IFN+ + + ++
Sbjct: 160 DCAVSGRKFYLPNNGSMKLQFLFVEDMCKFFDILLQ--KKPSNHIFNVGNSKLISTKDWV 217
Query: 308 KLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLK 367
+C + G +E V+ + + ++ + F F + + D++ ++ E LK
Sbjct: 218 SMCYEIVGEKLEFVYVNQE---VEQRNYFSFYDYEYRLCVDKQNDLM--LECKDVKEGLK 272
Query: 368 ERFEEY 373
E +E Y
Sbjct: 273 ESYEWY 278
>gi|407973810|ref|ZP_11154721.1| NAD-dependent epimerase/dehydratase [Nitratireductor indicus C115]
gi|407430870|gb|EKF43543.1| NAD-dependent epimerase/dehydratase [Nitratireductor indicus C115]
Length = 298
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 120/296 (40%), Gaps = 44/296 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK----------PPFNRFNEIVSAG 133
SGG ++G ++ + LL +GH+V +M K PP R A
Sbjct: 9 SGGTGLVGRFIVEALLEAGHKVCVMGRKPPADGFFSKSVDFLPGTLEPPLVRTAAFEGAD 68
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
E G GG D NL+ + D A+++GVK+ +F+S+ +Y P
Sbjct: 69 FFIHAAFAHEPGKYRGGEGNDPERFRR-LNLEGSAALFDAARTAGVKRAVFLSTRAVYGP 127
Query: 194 -ADEPPHVEGDVVKPDAGHVQVEKYISEN----FSNWA----SFRPQYMIGSGNNKDCEE 244
AD E D +PD + +V K +EN SN + S R + G +
Sbjct: 128 RADGVMLDEADACRPDTLYGEV-KLAAENGLAGLSNESFAGISLRVTGVYGPAGPGQAHK 186
Query: 245 W--FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSDRAV 301
W F+ + RPV + H RD+++ + L ++ P +A S+ FN VSD A+
Sbjct: 187 WAGLFEDFLEGRPV-----APRVATEVHGRDVAAAVMLVLDAPMQAVSAQTFN-VSDIAL 240
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWR 357
+ L A+ +GL + + Y DA K R A LGW+
Sbjct: 241 DRHDLLALVARESGLNLPLPEY------ADAGKVNAMRTERLQA--------LGWK 282
>gi|239627258|ref|ZP_04670289.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239517404|gb|EEQ57270.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 339
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 110/261 (42%), Gaps = 44/261 (16%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG I + + L G ++T++ G +P + + IV+ D V
Sbjct: 7 GGTGTISASVTELALKRGWDITLLNRG-------SRPVPDGMDSIVAD-----IHDEEAV 54
Query: 145 GNVVGGVTFDVVLDNNGKNL-DAVRPVADWAKSSGV-KQFLFISSAGIY-KPADE----- 196
G + G T+DVV G DA+R D +GV +Q+++ISSA Y KP +
Sbjct: 55 GKAIAGTTYDVVAQFVGYTAEDALR---DIRLFTGVARQYIYISSASAYQKPVSDYRITE 111
Query: 197 -----PPHVEGDVVKPDAGHVQVEKYISENF---------SNWASFRPQYMIGSGNNKDC 242
P+ E K DA + ++ Y + F ++ P G+ N
Sbjct: 112 STPLANPYWEYSRQKIDAENALMDAYRRDGFPVTIVRPSHTHCGKKPPVTPHGAKGN--- 168
Query: 243 EEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
W RI+ +PV IPG G + H D + + NP A + F++ +D ++
Sbjct: 169 --WQVLKRILDGKPVIIPGDGTSLWTVTHASDFAKGYVGLMGNPHAIGHS-FHITTDESM 225
Query: 302 TLDGMAKLCAQAAGLPVEIVH 322
T + + + A A G+P++ VH
Sbjct: 226 TWNQIYETIADAMGMPLKAVH 246
>gi|453054133|gb|EMF01588.1| carbohydrate epimerase [Streptomyces mobaraensis NBRC 13819 = DSM
40847]
Length = 342
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 131/336 (38%), Gaps = 53/336 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---D 140
+GG IG ++A+ LLG GH V+++ D + R V G + G D
Sbjct: 7 TGGAGFIGSHVAEALLGLGHRVSVL-------DDLSGGSAER----VPDGAELFVGSVTD 55
Query: 141 PAEVGNVVGGVTFDVVLD----------------NNGKNLDAVRPVADWAKSSGVKQFLF 184
V + FD V N G N+ + + A GV F F
Sbjct: 56 AELVDKLFAEQRFDRVFHFAAFAAEAISHSVKSLNYGTNVMGSVNLINAALHHGVSFFCF 115
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDA---GHVQVEKYISENFSN----WASFRPQYMIGSG 237
SS +Y + P V D+ + VE+ + + +FR + G
Sbjct: 116 ASSVAVYGHGETPMRESSIPVPADSYGNAKLTVERELETTMRTQGLPFTAFRMHNVYGEW 175
Query: 238 NN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
N ++ FF++I+R P+ + G G Q ++V+D+ ++ A E EAA
Sbjct: 176 QNMRDPYRNAVAIFFNQILRGEPISVYGDGGQVRAFSYVKDIVDVIVRAPET-EAAWGRA 234
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 352
FN+ S R T+ +A+ +AAG P D A + A+ M Y A++
Sbjct: 235 FNVGSSRTNTVLELAQAVRRAAGAP------DHPIAHLPARDEV----MVAYTATEEARE 284
Query: 353 ILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEID 388
+ G + T L + L +G + + F+I+
Sbjct: 285 VFGDWADTPLADGLARTAAWAASVGPAELSPSFDIE 320
>gi|147921593|ref|YP_684590.1| dTDP-glucose 4,6-dehydratase [Methanocella arvoryzae MRE50]
gi|56295560|emb|CAH04802.1| dtdp-glucose 4,6-dehydratase [uncultured archaeon]
gi|110619986|emb|CAJ35264.1| dTDP-glucose 4,6-dehydratase [Methanocella arvoryzae MRE50]
Length = 312
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 130/323 (40%), Gaps = 49/323 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTI---MTVGDEN--SDKMKKPPFNRFNE-------IVS 131
+GG IG +L LL GHEVT+ ++ G + P F+ NE I S
Sbjct: 6 TGGAGFIGSHLTDRLLEEGHEVTVVDNLSGGQFRFIEHHVTNPEFSFVNEDLARDGLISS 65
Query: 132 A--GGKTVWGDPAEVGNVVGGVTFDVVLDNNG---KNLDAVRPVADWAKSSGVKQFLFIS 186
A G V+ A +V GVT D +N A V + +++GV++ F S
Sbjct: 66 AFEGADMVYHLAANP-DVRSGVT-----DTRTPLTQNTIATFNVLESMRAAGVRKIAFTS 119
Query: 187 SAGIYKPADEPPHVEG-----DVVKPDAGHVQVEKYISE-----NFSNWASFRPQYMIGS 236
++ +Y A+ P E + A + E IS + +W +R +IGS
Sbjct: 120 TSTVYGEAEVIPTPENYGPLMPISLYGASKLACEAMISAYCHTFDMQSWI-YRFANIIGS 178
Query: 237 GNNKDCEEWFFDRIVRKRPVP----IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ FD I R R P I G+G Q + H+ D + AV N A NI
Sbjct: 179 ---RGTHGVIFDFIGRLRKDPSKLTILGNGRQSKSYLHISDCVDGMLFAVRNSNAPV-NI 234
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 352
FN+ SD + G+A+ A GL E V ++ K PF + A
Sbjct: 235 FNIGSDDRFDVTGIARAVASEMGL--ENVEFEYTGGDRGWKGDVPFMTLSI-----AKLK 287
Query: 353 ILGWRSTTNLPEDLKERFEEYVK 375
LGW+ N E ++ E ++
Sbjct: 288 ALGWKPVHNSEESVRLCVRELLR 310
>gi|424827686|ref|ZP_18252457.1| hypothetical protein IYC_06089 [Clostridium sporogenes PA 3679]
gi|365979954|gb|EHN15999.1| hypothetical protein IYC_06089 [Clostridium sporogenes PA 3679]
Length = 728
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 145/342 (42%), Gaps = 58/342 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK----KPPFNRFN------EIVSAG 133
+GG+ IG ++ + G+EV I + + +S K++ K F +F+ E V
Sbjct: 6 TGGYGFIGSHVVERFAKEGYEVFI--IDNMSSGKLENVNCKHKFYKFDVEDKRCEFVFKN 63
Query: 134 GK--TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
V A++ NV+ + D LD N+ + + + + VK+F+F SSA IY
Sbjct: 64 NNFDIVVHLAAQI-NVITSLK-DPFLDTKT-NILGLVNMLELSTKYKVKKFIFASSAAIY 120
Query: 192 KPADEPPHVEGDVVKPDAGHVQVEKYISENFS-NW--------ASFR-------PQYMIG 235
+ P E ++ +P + + + KY+ E + W FR Q +IG
Sbjct: 121 GNNENIPLTEREIAEPLSPY-GISKYVGEGYCKKWNEIYNLDTICFRFSNVYGPRQGIIG 179
Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
G F D I + + + + G G Q + +V DL+ L A E+ SS ++NL
Sbjct: 180 EGG---VVSIFMDNITKDQEITLNGDGEQTRDFIYVSDLTDALFKAAESN--ISSGVYNL 234
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILG 355
++ +L+ + K+ + I D K D K H + K LG
Sbjct: 235 STNSRSSLNNLIKILNNLKNIKGIIKKEDRKG---DIK--------HSSLDNTKIKKALG 283
Query: 356 WRSTTNLPEDLKERFEEY---VKI---GRDKKAMQFEIDDKI 391
W +L + +K F+ Y K+ +KK +++ DDKI
Sbjct: 284 WIPMVSLEQGIKNTFDWYSTNYKVEESNTEKKKLKY--DDKI 323
>gi|448315235|ref|ZP_21504887.1| NAD-dependent epimerase/dehydratase [Natronococcus jeotgali DSM
18795]
gi|445612312|gb|ELY66043.1| NAD-dependent epimerase/dehydratase [Natronococcus jeotgali DSM
18795]
Length = 329
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 119/302 (39%), Gaps = 47/302 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L ELL G++VT+ G + PF + + G E
Sbjct: 8 GGTRFIGRHLVDELLEHGYDVTLFNRG------THENPFADDDRVARIEGDRTNDSALEA 61
Query: 145 GNVVGG--VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
+ G FD V A R AD + ++F+SS Y +E P EG
Sbjct: 62 AALEVGPDAVFDCVAYYPKDVQAATRIFAD------CEAYVFVSSGAAYG-REEIPKREG 114
Query: 203 DVVKPDAGHVQVEKYISENFSNWA---------------------SFRPQYMIGSGNNKD 241
+ P AG E+ + ++ + + + RP + G + +
Sbjct: 115 ET--PLAG-CTPEQAVDDSGATYGPRKAEGDRAVFAAAERGVRAMAVRPCIVYGPHDYTE 171
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR+ R V +PG G + A+V D++S L L E +A + +N+ R
Sbjct: 172 RLDFWIDRVNRFDRVVVPGDGTNLWHRAYVEDVASALRLVAERGDAGEA--YNVGDRRLA 229
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNM-HFYAEPRAAKDILGWR 357
TL+ +L A VE+V P+ A I+ +R H A + A LGW
Sbjct: 230 TLEETLELIADVLDTTVEVVTAGPRELEAGDIEPADYVLYREYPHVLATGKLAA--LGWE 287
Query: 358 ST 359
ST
Sbjct: 288 ST 289
>gi|116691199|gb|ABK15661.1| BssK [Azoarcus sp. CIB]
Length = 314
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 83/199 (41%), Gaps = 22/199 (11%)
Query: 141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK-----PAD 195
P EV + + G +D V+D V + + V+QFL IS+ +Y+ P D
Sbjct: 55 PEEVRDAIPGGEWDAVVDFCAYTPAHVETLLGNLRGR-VRQFLLISTTTVYRNPSGGPLD 113
Query: 196 E-PPHVEGDVVKPDAGHVQ---VEKYISENFS---------NWASFRPQYMIGSGNNKDC 242
E P ++G +P+ G EK ++E+ + RP + G N
Sbjct: 114 ENAPLLDGP--QPELGEYAGYGYEKCLAEDAARRECERLGIGLTVLRPAIIYGYYNYAPR 171
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
E +FFDR+ + P+ IP N V D++ +L + P FNL S AVT
Sbjct: 172 ETYFFDRLRNREPIVIPDPTRSSFNFIWVVDMARLLWRCIGEP-GVVGETFNLASGEAVT 230
Query: 303 LDGMAKLCAQAAGLPVEIV 321
+ + G PVE +
Sbjct: 231 YSRIVEALGGIVGKPVETL 249
>gi|111219998|ref|YP_710792.1| UDP-glucose 4-epimerase [Frankia alni ACN14a]
gi|111147530|emb|CAJ59183.1| putative UDP-glucose 4-epimerase [Frankia alni ACN14a]
Length = 309
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 130/318 (40%), Gaps = 47/318 (14%)
Query: 98 LLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE-VGNVVGGVTFDVV 156
LL +GH+V + V SD +R +++ G T E V +V G D
Sbjct: 4 LLDAGHDVLSLDVDSRPSDPRAT---SRQVDVLDLPGLTAALAGVEAVFHVAGMSNVDFA 60
Query: 157 LDNNGK----NLDAVRPVADWAKSSGVKQFLFISSAGIY----KPADEPPHVE-GDVVKP 207
+ + N++ V + A+ +GV + LF S+ +Y + AD P E ++
Sbjct: 61 YADPARTVRLNVEGTGNVCEAARQAGVARVLFASTVWVYGAVGERADPAPLTEDAEITLG 120
Query: 208 DAGHVQVEKYISENFSNWASFRPQYMI-----------GSGNNKDCEEWFFDRIVRK--- 253
AGHV ++ S++ Y + G G +E R VRK
Sbjct: 121 RAGHVYTSTKLAAELL-LHSYQQTYGLPFTILRYGIPYGPGMR---DELVLARFVRKALD 176
Query: 254 -RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK-LCA 311
+ + G G QF N VRDL+ LA+ PEA ++ I L AV++ MA+ +C+
Sbjct: 177 GESLTVAGDGQQFRNYVFVRDLADAHVLAL-RPEAENATI-ALEGAEAVSVLEMAQAVCS 234
Query: 312 QAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 371
G +E V P FR A+ A D+LGW+ TT + +++ E
Sbjct: 235 HFPGTAIEHVPARPG----------DFRGREVSAQ--RALDLLGWQPTTPFTDGVRQYIE 282
Query: 372 EYVKIGRDKKAMQFEIDD 389
Y+ R +DD
Sbjct: 283 WYLANRRPPAQAVQPVDD 300
>gi|443624519|ref|ZP_21108989.1| putative NDP-glucose 4-epimerase [Streptomyces viridochromogenes
Tue57]
gi|443341964|gb|ELS56136.1| putative NDP-glucose 4-epimerase [Streptomyces viridochromogenes
Tue57]
Length = 342
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 128/336 (38%), Gaps = 53/336 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---D 140
+GG IG ++A+ LL GH V+++ D + R E G + G D
Sbjct: 7 TGGAGFIGSHVAEALLSRGHRVSVL-------DDLSGGSAERVPE----GAQLFTGSVTD 55
Query: 141 PAEVGNVVGGVTFDVVLD----------------NNGKNLDAVRPVADWAKSSGVKQFLF 184
V + FD V N G N+ + + A +GV F F
Sbjct: 56 VELVDRLFAEQRFDHVFHFAAFAAEAISHSVKSLNYGTNVMGSVNLINAALRTGVSFFCF 115
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDA---GHVQVEKYISENFSN----WASFRPQYMIGSG 237
SS +Y + P V D+ + VE+ + + +FR + G
Sbjct: 116 ASSVAVYGHGETPMRESSIPVPADSYGNAKLTVERELETTMRTQGLPFTAFRMHNVYGEW 175
Query: 238 NN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
N ++ FF++I+R P+ + G G Q ++V+D+ ++ A E E A
Sbjct: 176 QNMRDPYRNAVAIFFNQILRGEPISVYGDGGQVRAFSYVKDIVDVIVRAPET-EKAWGRA 234
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 352
FN+ S R T+ +A+ AAG+P + + P + M Y A++
Sbjct: 235 FNVGSSRTNTVLELAQAVRAAAGVPSHPIAHLPARDEV----------MVAYTATEEARE 284
Query: 353 ILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEID 388
+ G + T L + L +G + FEI+
Sbjct: 285 VFGDWADTPLADGLARTAAWAASVGPAELRSSFEIE 320
>gi|152967949|ref|YP_001363733.1| NAD-dependent epimerase/dehydratase [Kineococcus radiotolerans
SRS30216]
gi|151362466|gb|ABS05469.1| NAD-dependent epimerase/dehydratase [Kineococcus radiotolerans
SRS30216]
Length = 337
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 109/258 (42%), Gaps = 31/258 (12%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
+VL+V GH IG YL L+G+GHEV ++ G + P + R +V+ +
Sbjct: 19 RVLVVGAT--GH--IGSYLVPRLVGAGHEVVALSRGTREPYR-AHPAWERVERVVA--DR 71
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG---IYK 192
G V + D V+D + R + + + +G F++ G ++
Sbjct: 72 DAEDAAGTFGARVARLRPDAVVDLVCFTPASARLLVEALRPTGA----FLAHCGTIWVHG 127
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENF---SNWASFR-----PQYMIGSG------- 237
PA P E D P + + I E + R P ++ G G
Sbjct: 128 PAAASPLREDDPRAPFGEYGTQKAAIEELLLAETRSGGLRTTVLHPGHISGPGWPVITPL 187
Query: 238 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
N D + W R+ + +PG G++ + H D++ A+ +P AA+ F++VS
Sbjct: 188 GNLDPQVW--RRLSTGEELLVPGLGLETLHHVHADDVAQGFERALADPGAAAGESFHVVS 245
Query: 298 DRAVTLDGMAKLCAQAAG 315
DRA+T+ G A+ A+ G
Sbjct: 246 DRALTVRGFAEAAARWWG 263
>gi|304316399|ref|YP_003851544.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777901|gb|ADL68460.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 319
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 64/128 (50%), Gaps = 13/128 (10%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F D+++ + I G G Q + +V+D++ LA+EN + I N+ +++A T++
Sbjct: 187 FIDKMLSGKNPVIFGDGNQTRDFIYVKDVAKANLLALEN---GDNEIINISTNKATTINE 243
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
+ + + ++ ++ +P+ I +H Y + + AKD+LGW+ L +
Sbjct: 244 LVNIMNKIMNASLKPIYAEPRKGDI----------VHSYLDNKKAKDVLGWKPDYELEDG 293
Query: 366 LKERFEEY 373
LKE E Y
Sbjct: 294 LKETVEYY 301
>gi|365155762|ref|ZP_09352114.1| hypothetical protein HMPREF1015_02168 [Bacillus smithii 7_3_47FAA]
gi|363628044|gb|EHL78863.1| hypothetical protein HMPREF1015_02168 [Bacillus smithii 7_3_47FAA]
Length = 301
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 123/311 (39%), Gaps = 42/311 (13%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP-PFNRFNEIVSAGGKTV----- 137
+GG IG +L +ELL G +V ++ K P +I S G K +
Sbjct: 6 TGGAGFIGSHLVEELLLQGAKVHVLDNLVSGQLKNVHPLAVMHIEDIRSQGAKQIIKREK 65
Query: 138 ------WGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
A+VG + +D ++ NG + + + + VK+ +F S++G+Y
Sbjct: 66 PDVVFHLAAQADVGQSIREPKYDADMNING-----TINILEACREASVKKVIFASTSGVY 120
Query: 192 KPADEPPHVEGDVVKPDAGH----VQVEKYISENFS----NWASFRPQYMIGSGNNKDCE 243
+ E D+ P + H + E YI ++ R + G + E
Sbjct: 121 GNLQKDLISEKDLTMPISYHGLSKLTAESYIRLFHQLYGLSYTILRYGNVYGPRQSAKGE 180
Query: 244 ----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
F DRI + P+ I G G Q + +V+D+ AVE + + + + +
Sbjct: 181 GGVIAIFLDRIKKGMPLMIHGDGEQTRDFVYVKDIVRANIAAVEKGDQET---IQVSTGK 237
Query: 300 AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRST 359
+++++ + K+ Q G P+E ++ + I H + + A+ +L W
Sbjct: 238 SISINHLVKMLTQIYGSPIETIYTHARTGDIK----------HSCLDNKKARQLLQWNPQ 287
Query: 360 TNLPEDLKERF 370
++ L E +
Sbjct: 288 VDIFNGLTETY 298
>gi|322369860|ref|ZP_08044422.1| 3-beta hydroxysteroid dehydrogenase/isomerase family superfamily
protein [Haladaptatus paucihalophilus DX253]
gi|320550196|gb|EFW91848.1| 3-beta hydroxysteroid dehydrogenase/isomerase family superfamily
protein [Haladaptatus paucihalophilus DX253]
Length = 329
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 130/320 (40%), Gaps = 44/320 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-GDPAE 143
GG IG +L +LL +G++VTI G N N A G + + GD +
Sbjct: 8 GGTRFIGRHLVTDLLDNGYDVTIFNRG------------NHDNPFADADGVSHFEGDRTD 55
Query: 144 VGNVVGG---VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-------KP 193
G + V ++V+D VR + + V +++ISS Y +
Sbjct: 56 DGALEAARDEVDPNIVIDCVAYKPREVRAATEIF--ADVDGYVYISSGSAYGNEVIPKRE 113
Query: 194 ADEPPHVEGDVVKPDAGH-------VQVEKYI---SENFSNWASFRPQYMIGSGNNKDCE 243
D D D H + ++ I +E N S RP + G + +
Sbjct: 114 NDTELCACTDEQATDDSHDSYGPRKAEGDRAIFEAAERGVNAMSVRPCIVYGPYDYTERL 173
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
+++ DR+ + + +PG G + A+ D++S L + E E +N+ +R VT+
Sbjct: 174 DFWIDRVNERDRLVVPGDGQNVWHRAYAEDVASALRIVAE--EGDPGEAYNVGDERLVTM 231
Query: 304 DGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNM-HFYAEPRAAKDILGWRST 359
D M L A A VE+VH + A + +R+ H + A LGW ST
Sbjct: 232 DEMLSLIADALDTDVELVHASDRELSTADLSTDDYILYRDYPHVLDTNKLAA--LGWEST 289
Query: 360 TNLPEDLKERFEEYVKIGRD 379
L ++ EE+++ RD
Sbjct: 290 P-LDVAMERTVEEHLESDRD 308
>gi|343084239|ref|YP_004773534.1| NAD-dependent epimerase/dehydratase [Cyclobacterium marinum DSM
745]
gi|342352773|gb|AEL25303.1| NAD-dependent epimerase/dehydratase [Cyclobacterium marinum DSM
745]
Length = 317
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 132/306 (43%), Gaps = 46/306 (15%)
Query: 93 YLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNV---VG 149
YL L+ +GH V + V ++S +K P + E V+ E GN +
Sbjct: 15 YLIPRLVEAGHRV--VCVSRQHSIPYRKHPAWKSVEHVTIDRVKA----EEAGNFSSQIV 68
Query: 150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA 209
+ D+V+D ++ R +++ A + +K FL S ++ +++ P E KP
Sbjct: 69 ALNGDIVIDLICFTAESARKLSE-ALNGKIKHFLHCGSMWVHGHSEQVPTTENQKRKPFG 127
Query: 210 GH----VQVEKYISENFSNWASF-----RPQYMIGSG-------NNKDCEEWFFDRIVRK 253
+ +E Y+ +F + F P +++G G N + E F R+ +
Sbjct: 128 EYGIDKANIEAYL-HSFHQESGFPVTILHPGHIVGPGWLPVNPAGNFNPE--VFVRLAKG 184
Query: 254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 313
V IP GM+ + H D++ ++EN + A F++VS++A+TL G A+ A+
Sbjct: 185 EVVQIPNLGMETVHHVHADDVAQAFVKSIENRDYAIGESFHVVSEQALTLRGFAEAMAEK 244
Query: 314 AG-------LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP----RAAKDILGWRSTTNL 362
G LP E ++ + D + F H P AKD+LG++ +
Sbjct: 245 FGQVANLQFLPWET--WEKTVSSTDKE----FTWDHIAHSPCGSISKAKDLLGYQPQYSS 298
Query: 363 PEDLKE 368
E ++E
Sbjct: 299 LEAVQE 304
>gi|119477576|ref|ZP_01617726.1| hypothetical protein GP2143_08945 [marine gamma proteobacterium
HTCC2143]
gi|119449079|gb|EAW30319.1| hypothetical protein GP2143_08945 [marine gamma proteobacterium
HTCC2143]
Length = 364
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 106/256 (41%), Gaps = 41/256 (16%)
Query: 55 ASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN 114
ASS S+VSA + +A K++L++ GG IG + + GH VT+ G N
Sbjct: 17 ASSMSSTVSAAVTRPTA---KRILVL----GGSGFIGPHFVRAAQARGHHVTLFNRGRTN 69
Query: 115 SDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWA 174
D + A K V GD + +DVVLDN+G V A
Sbjct: 70 KD------------LFPAAEKLV-GDRNNGLESITKGEWDVVLDNSGYVPRHVMDSAVLL 116
Query: 175 KSSGVKQFLFISSAGIYKPA-DEPP-------HVEGDVVKPDAGHVQ------VEKYISE 220
K V +++F SS Y A D P D + G E Y+S+
Sbjct: 117 KGR-VGRYIFTSSVAAYDVAPDRLPMGATSKLSTLADPTSENVGKYYGPLKAVAEGYVSD 175
Query: 221 NFSNWASF-RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM-L 278
+ + ++ RP Y+ G G+ W+ DRI R + PG+ ++ VRDL+ L
Sbjct: 176 IYGDRSTIVRPTYVAGPGDGTQRFTWWVDRIHRGGEILAPGTPETSYSLIDVRDLAEFYL 235
Query: 279 TLAVENPEAASSNIFN 294
TLA E + IFN
Sbjct: 236 TLA----ENDTPGIFN 247
>gi|448712657|ref|ZP_21701776.1| NAD-dependent epimerase/dehydratase [Halobiforma nitratireducens
JCM 10879]
gi|445790364|gb|EMA41029.1| NAD-dependent epimerase/dehydratase [Halobiforma nitratireducens
JCM 10879]
Length = 362
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 148/377 (39%), Gaps = 62/377 (16%)
Query: 60 SSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK 119
+ S T AS + ++I GG IG +L ELL ++VT+ G +
Sbjct: 8 TDASTHTTTASRDLEDALVI-----GGTRFIGRHLVDELLRHDYDVTLFNRG------TR 56
Query: 120 KPPFNRFNEIVSAGGKTVWGDPAEVGNVVG--GVTFDVVLDNNGKNLDAVRPVADWAKSS 177
+ PF + + G D E FD V A R AD
Sbjct: 57 ENPFADDDRVDHLEGDRTDDDALEAAAAEVDPDAVFDCVAYYPADVRTATRVFAD----- 111
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDV--------VKPDAGH-------VQVEKYISE-- 220
K ++++SS Y D P EG+ D H + ++ + E
Sbjct: 112 -CKAYVYVSSGAAYGREDVPKR-EGETPLAACTAEQATDDSHDTYGNRKAEGDRAVFEAA 169
Query: 221 -NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 279
+ N S RP + G + + +++ DR+ R V +PG G + +V D++S L
Sbjct: 170 ADGVNAMSLRPPIVYGPHDYTERLDFWIDRVNRFDRVIVPGDGTNIWHRVYVEDVASALR 229
Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ------------AAGLPVEIVHYDPK- 326
L E E + +N R VTL+ M +L A+ AA +E+VH P+
Sbjct: 230 LVAERGEPGEA--YNTGDRRLVTLEEMVELIAEQLARVGSGDEEPAADDGIELVHAGPRE 287
Query: 327 --AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQ 384
A GI+ + +P H + LGW ST E + E++++ RD +
Sbjct: 288 LAAGGIELED-YPLYRSHPHVMATNKLAALGWESTPP-AEAMARAVEDHLESDRDGRDQG 345
Query: 385 FEIDDK-----ILESLK 396
+ +D+ +LE+L+
Sbjct: 346 PDREDEKRVLGVLETLQ 362
>gi|320547073|ref|ZP_08041370.1| nucleoside-diphosphate-sugar epimerase [Streptococcus equinus ATCC
9812]
gi|320448279|gb|EFW89025.1| nucleoside-diphosphate-sugar epimerase [Streptococcus equinus ATCC
9812]
Length = 219
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 93/221 (42%), Gaps = 16/221 (7%)
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
D ++GN + + FDVVLD N + + + S G ++ ISS+ +Y P
Sbjct: 4 ADRHDLGNRLKNLHFDVVLDVTAYNASDISCLIEGLGSFGT--YIMISSSSVYPDDGAQP 61
Query: 199 HVEGDVVKPDA-------GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV 251
+E + + + EK + E + RP Y+ G NN E + FD
Sbjct: 62 FLETSQLGDNKFWGQYGLDKIAAEKQLLELVPDAYILRPPYLYGPMNNVYREAFVFDCAE 121
Query: 252 RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC- 310
P +P G +++DL M+ +EN +++N+ + A+++ KLC
Sbjct: 122 DDLPSYLPRKGELKLQFFYIKDLCRMMEKIIEN--QPKEHLYNVGNSEAISVRQWVKLCY 179
Query: 311 AQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAK 351
A + +P I +D ++ + F F + F+ + K
Sbjct: 180 ACSNKIPEFIGVFDE----VNRRNYFSFYDYEFFLDVERKK 216
>gi|418051490|ref|ZP_12689574.1| NAD-dependent epimerase/dehydratase [Mycobacterium rhodesiae JS60]
gi|353184182|gb|EHB49709.1| NAD-dependent epimerase/dehydratase [Mycobacterium rhodesiae JS60]
Length = 339
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 139/339 (41%), Gaps = 73/339 (21%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G I YL +ELL +G+EV VG +N K P F S G V GD +
Sbjct: 6 TGSAGFIAGYLVEELLANGYEV----VGLDNYSKYG-PVERAFESNPSYTG--VEGDAKD 58
Query: 144 VG----------------NVVGGVT------FDVVLDNNGKNLDAVRPVADWA-KSSGVK 180
V ++GG++ +D+ L N + + A WA ++S ++
Sbjct: 59 VALLKELLDSCDHLVAGAAIIGGISLFHELAYDL-LSENERITASTFDAAIWAHRNSSLR 117
Query: 181 QFLFISSAGIYKPADEPPHVEGDVVK--PDAGHVQVEKYISENFSN--WASF-------R 229
+ +SS+ +Y+ P EG+ + P +K +E F+ W + R
Sbjct: 118 KITVVSSSMVYESTSSYPTPEGEQRRCPPPESTYGFQKLATEYFAQGAWEQYQLPYTIVR 177
Query: 230 PQYMIGSGNNKD-CEEWFFDRIVR-----------------KRPVPIPGSGMQFTNIAHV 271
P IG G + C+ VR + P+ I G G Q + +
Sbjct: 178 PFNCIGIGEKRALCDREIMSGNVRLAMSHVVPDLVQKVLKGQDPLHILGDGDQVRHYTYG 237
Query: 272 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA--AGLPVEIVHYDPKAAG 329
DL+ + LA+E+ +AA + FNL + + T+ +A++ + P+ I DP
Sbjct: 238 GDLARGIRLAIES-DAAHNEDFNLSTATSTTVHELAEVIWRKIKGDTPLRITSDDP---- 292
Query: 330 IDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 368
FP+ + + A D LG+++TT+L E L E
Sbjct: 293 ------FPYDVQRRVPDVQKAMDTLGFKATTSLDEALDE 325
>gi|359417148|ref|ZP_09209355.1| NAD-dependent epimerase/dehydratase [Candidatus Haloredivivus sp.
G17]
gi|358032473|gb|EHK01171.1| NAD-dependent epimerase/dehydratase [Candidatus Haloredivivus sp.
G17]
Length = 317
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 112/268 (41%), Gaps = 41/268 (15%)
Query: 112 DENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVA 171
DE+ +K+ P F+ AG + +P E +NL + +
Sbjct: 70 DEDLEKLPSNPDKVFHNAAVAGVRNSIENPTEYAK---------------QNLLGLSKLL 114
Query: 172 DWAKSSGVKQFLFISSAGIYK--PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFR 229
D +S G +F+F SS+ +Y P DE P E + P A + Q +K+ E ++
Sbjct: 115 DSFESIG--KFMFASSSSVYGMVPEDELPVQEDRELSPIAPYPQSKKHGEEMVRLYSELY 172
Query: 230 P------QYMIGSGNNKDCEEWF---FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
+Y G + +E F ++ PV I G G Q + +V+D++S
Sbjct: 173 DFDYSILRYFTVYGPRQRPDEAFTKFIQMVLNDEPVTIYGDGEQSRDFTYVKDIASG--- 229
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRN 340
A++ E S+ +N+ S R +T++ M + + VE H + DA+
Sbjct: 230 AIKASEKQGSDTYNIASGRRITVNEMVETLDEVMEENVEKTHVEQPEG--DAR------- 280
Query: 341 MHFYAEPRAAKDILGWRSTTNLPEDLKE 368
H +A+P AK L + + + E +KE
Sbjct: 281 -HTHADPTKAKKELDFEAEKDFEEAVKE 307
>gi|406936590|gb|EKD70274.1| hypothetical protein ACD_46C00581G0009 [uncultured bacterium]
Length = 337
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 95/225 (42%), Gaps = 37/225 (16%)
Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP-------------DAGHVQVEKY-IS 219
A+ +GV++FLF SS G+Y PA+ E DV K G +Q E Y I
Sbjct: 106 ARRAGVERFLFTSSVGVYSPAE--IFYEDDVWKTFPSPSDRFAGWAKRMGELQAEAYKIE 163
Query: 220 ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKR------PVPIPGSGMQFTNIAHVRD 273
N+ + RP + G +N D + KR P+ + G G + H RD
Sbjct: 164 YNWDKISIVRPANVYGPFDNFDPANAMVIPSLIKRAMDGENPLTVWGDGSPIRDFIHARD 223
Query: 274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL-CAQAAGLPVEIVHYDPKAAGIDA 332
++ + LAVE + NL S VT+ +A++ A G P+EIV K G DA
Sbjct: 224 VACGMMLAVEK---GINEPINLGSGTGVTIKEIAEIVAANVPGGPIEIVWDITKPKG-DA 279
Query: 333 KKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG 377
K+ + Y G++ ++ + + E E + K G
Sbjct: 280 KRLMDMTRANSY----------GFKPEISIEQGIIETIEWFAKNG 314
>gi|335436236|ref|ZP_08559036.1| NAD-dependent epimerase/dehydratase [Halorhabdus tiamatea SARL4B]
gi|334897918|gb|EGM36042.1| NAD-dependent epimerase/dehydratase [Halorhabdus tiamatea SARL4B]
Length = 325
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 120/307 (39%), Gaps = 31/307 (10%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + +E L ++V I G+ + PF+ + + G D A +
Sbjct: 8 GGTRFIGRHTVEEFLDHDYDVAIFNRGNHEN------PFDATDRVEHVQGDRT--DDAAL 59
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
V DVV+D + VR D + V ++++SS Y + P
Sbjct: 60 EAARDAVDPDVVIDCVAYHPRDVRAATD--IFADVDAYVYVSSGASYGKEEVPKRESETP 117
Query: 205 VKP---DAGHVQVEKY-------------ISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
++P D + Y +E+ N + RP + G + + +++
Sbjct: 118 LEPWPGDDSDESAQTYGKRKAEGDRAVFAAAEDGVNAMAVRPTVVYGPHDYTERFDYWLA 177
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RI + +PG G+ A+V D++S L + E EA + +N+ A TL +
Sbjct: 178 RIDTYDRIVVPGDGLSLWQFAYVEDVASALRIVAERGEAGEA--YNVGDRHAPTLGQWVE 235
Query: 309 LCAQAAGLPVEIV--HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDL 366
L A A PV V + AA + A + FP + A LGW ST E L
Sbjct: 236 LIADAMDRPVHAVGASANELAAAVLAPEDFPLYRDQPHLLSTAKLHDLGWDSTPQ-EEAL 294
Query: 367 KERFEEY 373
+ EE+
Sbjct: 295 QATVEEH 301
>gi|187734545|ref|YP_001876657.1| NAD-dependent epimerase/dehydratase [Akkermansia muciniphila ATCC
BAA-835]
gi|187424597|gb|ACD03876.1| NAD-dependent epimerase/dehydratase [Akkermansia muciniphila ATCC
BAA-835]
Length = 308
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 32/230 (13%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--------GHVQV 214
N++ + V + A ++GVK+ + SSA IY P +E +P + G +
Sbjct: 92 NVNGLLNVLEEASAAGVKKIVLASSAAIYGDNPTVPKLETMYPEPKSPYAITKLDGEYYL 151
Query: 215 EKYISENFSNWASFRPQYMIG-----SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 269
+ +E N A+ R + G G F ++ V+ + + G G Q +
Sbjct: 152 NMFRAEGKINTAAVRFFNVFGPRQDPKGAYAAAVPIFIEKAVKGEDITVYGDGSQTRDFI 211
Query: 270 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
+V+D+ LT E+PE + +FN +T++ +A+ +AAG +++H P+ G
Sbjct: 212 YVKDIVGALTFVAEHPEV--TGVFNAGYGGQITIEELAQNIIKAAGSSSKVLH-APERPG 268
Query: 330 IDAKKAFPFRNMHFYAEPRAAKDIL---GWRSTTNLPEDLKERFEEYVKI 376
D K + RA D L GW+ LPE L E + I
Sbjct: 269 -DVKHS------------RACADKLRNAGWQPRHTLPEGLATTLEYFKGI 305
>gi|448446377|ref|ZP_21590696.1| NAD-dependent epimerase/dehydratase [Halorubrum saccharovorum DSM
1137]
gi|445684132|gb|ELZ36517.1| NAD-dependent epimerase/dehydratase [Halorubrum saccharovorum DSM
1137]
Length = 333
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 124/296 (41%), Gaps = 35/296 (11%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + ELL + +EV ++ G + PF+ + + G + ++
Sbjct: 12 GGTRFIGRHTVSELLANDYEVGMLNRG------THENPFSDDDRVTHIEGDR--KNERDL 63
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
V DVV+D V AD V +++ISS Y A+E P EG+
Sbjct: 64 RTAKLSVEPDVVIDCVAYQPADVETAAD--VFGDVDGYVYISSGDSYA-AEEIPKREGET 120
Query: 205 -VKP-------DAG-------HVQVEKYI---SENFSNWASFRPQYMIGSGNNKDCEEWF 246
++P D G + ++ + +E + RP + G + + +++
Sbjct: 121 PLRPCTPEQATDDGSNTYGNRKAEGDRVVFAAAEEGVRAMAVRPCIVYGPYDYTERLDYW 180
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
DR++ V +PG G + A+V D++S L + E EA + +N+ RA+TL+
Sbjct: 181 IDRVLSHDRVVVPGDGQNLWHRAYVEDVASALRIVAERGEAGRA--YNVGDRRALTLEET 238
Query: 307 AKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRST 359
+ A AAG E+V A G++ +R + A D LGW ST
Sbjct: 239 LEAIADAAGADCELVTASADALAAGGLEPDDFVLYREYPHLLDTCALAD-LGWEST 293
>gi|15077452|gb|AAK83179.1|AF333038_24 putative NDP-glucose 4-epimerase [Streptomyces viridochromogenes
Tue57]
Length = 342
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 127/333 (38%), Gaps = 47/333 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG ++A+ LL GH V+++ D + R E +V D
Sbjct: 7 TGGAGFIGSHVAEALLSRGHRVSVL-------DDLSGGTAERVPEGAHLFTGSV-TDVEL 58
Query: 144 VGNVVGGVTFDVVLD----------------NNGKNLDAVRPVADWAKSSGVKQFLFISS 187
V + FD V N G N+ + + A +GV F F SS
Sbjct: 59 VDRLFAEQRFDHVFHFAAFAAEAISHSVKSLNYGTNVMGSVNLINAALRTGVSFFCFASS 118
Query: 188 AGIYKPADEPPHVEGDVVKPDA---GHVQVEKYISENFSN----WASFRPQYMIGSGNN- 239
+Y + P V D+ + VE+ + + +FR + G N
Sbjct: 119 VAVYGHGETPMRESSIPVPADSYGNAKLTVERELETTMRTQGLPFTAFRMHNVYGEWQNM 178
Query: 240 ----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
++ FF++I+R P+ + G G Q ++V+D+ ++ A E E A FN+
Sbjct: 179 RDPYRNAVAIFFNQILRGEPISVYGDGGQVRAFSYVKDIVDVIVRAPET-EKAWGRAFNV 237
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILG 355
S R T+ +A+ AAG+P + + P + M Y A+++ G
Sbjct: 238 GSSRTNTVLELAQAVRAAAGVPSHPIAHLPARDEV----------MVAYTATEEAREVFG 287
Query: 356 WRSTTNLPEDLKERFEEYVKIGRDKKAMQFEID 388
+ T L + L +G + FEI+
Sbjct: 288 DWADTPLADGLARTAAWAASVGPAELRSSFEIE 320
>gi|148657967|ref|YP_001278172.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1]
gi|148570077|gb|ABQ92222.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1]
Length = 335
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 61/141 (43%), Gaps = 14/141 (9%)
Query: 240 KDCEEWFF----DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
KD + F R++ + P+ + G G Q + +V D+ L LA + AA IFNL
Sbjct: 197 KDARQTFLGIWIKRLIDEEPIQVFGDGSQIRDFNYVDDVVEALLLAGAS-SAADGGIFNL 255
Query: 296 VSDRAVTLDGMAKLCAQA-AGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 354
SD + L +A L G EIV + P ID +YA+ R + L
Sbjct: 256 GSDETINLRDLAALLIDINGGGSFEIVPFPPDRKAIDIGD--------YYADYRLIQGRL 307
Query: 355 GWRSTTNLPEDLKERFEEYVK 375
GWR L E L+ E Y +
Sbjct: 308 GWRPKVPLREGLRRTLEFYRR 328
>gi|408403557|ref|YP_006861540.1| NAD-dependent epimerase/dehydratase family, includes UDP-galactose
4-epimerase-like proteins [Candidatus Nitrososphaera
gargensis Ga9.2]
gi|408364153|gb|AFU57883.1| NAD-dependent epimerase/dehydratase family, includes UDP-galactose
4-epimerase-like proteins [Candidatus Nitrososphaera
gargensis Ga9.2]
Length = 313
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 126/310 (40%), Gaps = 35/310 (11%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM----TVGDENSDKMKKPPFN----RFNEIVSAGGK 135
+GG IG +L + LL + V I+ + EN + + F R E +S K
Sbjct: 7 TGGAGFIGHHLVRRLLQQDYRVVIIDNLSSAKTENIPRHQNAVFYKEDVRNMETISDIVK 66
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDN--NGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
D + VT +V N N++ V + ++GV F+F SSA +Y
Sbjct: 67 RERIDACIHLAAITSVTESLVFSNEVTDVNVNGTASVLEACTNAGVGSFVFASSAAVYGE 126
Query: 194 ADEPPHVEGDVVKPD--------AGHVQVEKYI-SENFSNWASFRPQYMIGSGNN---KD 241
A P E ++P AG VE Y S + S R + G G N
Sbjct: 127 AKILPVPEDKELRPISPYGESKVAGEKLVESYQKSGKIPHAISLRFFNVYGEGQNPRYAG 186
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
F +R+ + P I G GMQ + + D+ + LA+ + + +FN+ + +A+
Sbjct: 187 VITKFTERLSKGLPPVIYGDGMQTRDFISINDVVDAIMLAI---GSGTFGVFNIGTGKAI 243
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTN 361
T++ +AK + GL + H +KA +H A+ + + LG+ +
Sbjct: 244 TINELAKEMMRMFGLDLRPEH----------QKANHGEILHSCADIKRSSTALGFVARRT 293
Query: 362 LPEDLKERFE 371
L +L+ E
Sbjct: 294 LEVELRNIIE 303
>gi|448449544|ref|ZP_21591769.1| NAD-dependent epimerase/dehydratase [Halorubrum litoreum JCM 13561]
gi|445813173|gb|EMA63154.1| NAD-dependent epimerase/dehydratase [Halorubrum litoreum JCM 13561]
Length = 330
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 123/321 (38%), Gaps = 46/321 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEIVSAGGKTVWG 139
GG IG + +ELL +EV I G+ + D++ +R +E K
Sbjct: 9 GGTRFIGRHTVEELLAHDYEVAIFNRGNHENPFADDDRVTHVEGDRKDETALRAAKL--- 65
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH 199
+V V D V A AD V +++ISS Y A+E P
Sbjct: 66 ------SVEPDVVIDCVAYQPADVETATEIFAD------VDGYVYISSGSSYA-AEEIPK 112
Query: 200 VEGDVVKPDAGHVQVEKYISENFSNWAS------------------FRPQYMIGSGNNKD 241
EG+ Q E + N + RP + G + +
Sbjct: 113 REGETPLEPCTDEQAVDDDHETYGNRKAEGDRAVFAAAEAGVAAMAVRPCIVYGPHDYTE 172
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR++ V +PG G + A+V D++S L + E E ++ +N+ RA+
Sbjct: 173 RLDYWIDRVLTHDRVVVPGDGQNLWHRAYVEDVASALRIVAERGEPGAA--YNVGDRRAL 230
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS 358
TL + A AG+ E+V A G++ +R + A D LGW S
Sbjct: 231 TLRETLETIADVAGIDCELVTASDDALAAGGLEPDDFVLYREYPHLLDTCALAD-LGWES 289
Query: 359 TTNLPEDLKERFEEYVKIGRD 379
T + E + EE+ + RD
Sbjct: 290 TP-VDEAMARTVEEHRESDRD 309
>gi|256752410|ref|ZP_05493269.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter ethanolicus
CCSD1]
gi|256748679|gb|EEU61724.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter ethanolicus
CCSD1]
Length = 316
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 73/140 (52%), Gaps = 16/140 (11%)
Query: 246 FFDRIVR-KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
F D+I++ +RP+ I G G Q + +V+D++ LA+E + I N+ +++ +++
Sbjct: 187 FVDKILKDERPI-IFGDGNQTRDFVYVKDVAKANLLALEK---GDNEIVNISTNKPTSIN 242
Query: 305 GMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPE 364
+ L + G ++ ++ +P+ I +H Y + + A D+LGW+ +L E
Sbjct: 243 ELIDLMNKIMGTSLKPIYAEPRKGDI----------VHSYLDNKKALDVLGWKPEYSLEE 292
Query: 365 DLKERFEEY-VKIGRDKKAM 383
L+E E Y VK D+ A+
Sbjct: 293 GLRETIEYYRVKYAEDEVAI 312
>gi|170780544|ref|YP_001708876.1| lipoprotein [Clavibacter michiganensis subsp. sepedonicus]
gi|169155112|emb|CAQ00212.1| conserved putative lipoprotein [Clavibacter michiganensis subsp.
sepedonicus]
Length = 352
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 103/253 (40%), Gaps = 29/253 (11%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVG-DENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
GG I + + +G +VT++ G D R ++ DPA
Sbjct: 19 GGTGTISAACVRASVAAGMDVTVVNRGADAQGRGTPDGVTTRIADVT---------DPAA 69
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAV---RPVADWAKSSGVKQFLFISSAGIY-KPADEPPH 199
+ +G TFD V+D + DA R V +A + +QF+ ISSA IY KPA + P
Sbjct: 70 LLAAIGDRTFDAVVDF--LSFDAAGADRRVEVFAGRT--RQFVAISSASIYRKPALQTPI 125
Query: 200 VEGDV-VKPDAGHVQVEKYISENFSNWAS--------FRPQYMIGSGNNKDCEEW-FFDR 249
E + P + + + + + F + + RP + + +W DR
Sbjct: 126 TESTLRANPFLSYARDKIAMEDAFLRYHAASGFPVVIVRPSHTYDEASPPLAGDWTVVDR 185
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
I R V +PG G + H D + L + + E A ++ S +T D + +L
Sbjct: 186 IARGDEVVVPGDGTSLWTLTHADDFAVGL-VGILGDERAVGEALHITSGDVMTWDRIRRL 244
Query: 310 CAQAAGLPVEIVH 322
A A G+ +VH
Sbjct: 245 VADALGVEARLVH 257
>gi|319949389|ref|ZP_08023456.1| putative dTDP-glucose 4-epimerase [Dietzia cinnamea P4]
gi|319436946|gb|EFV91999.1| putative dTDP-glucose 4-epimerase [Dietzia cinnamea P4]
Length = 312
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 128/326 (39%), Gaps = 57/326 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW----- 138
+GG IG L LLG GH+VT++ D + + AG + V+
Sbjct: 6 TGGAGFIGSTLVDRLLGEGHDVTVV-------DNLSRGRLENLAAAREAGDRFVFHQLDL 58
Query: 139 GDPAEVGNVVGG----VTF-------------DVVLDNNGKNLDAVRPVADWAKSSGVKQ 181
DPA + +VV V F D V D + VR +A+ A+ +GV++
Sbjct: 59 TDPA-IEDVVAQARPEVIFHLAAQIDVRLSVEDPVHDAEVNVVGTVR-LAEAARKAGVRR 116
Query: 182 FLFISSAG-IYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSN-----WASFRPQ 231
+F SS G IY P E P E V P AG V E Y+ E FS WA P
Sbjct: 117 IVFTSSGGSIYGPVTELPVAETRPVDPLSPYAAGKVAGEIYL-EMFSRLYGIEWAGVAPA 175
Query: 232 YMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
+ G + E F R++ +P + G G + V D+ A E P A
Sbjct: 176 NVYGPRQDPHGEAGVVAIFSQRLLAGQPTRVFGDGGNTRDYVFVDDVVDAFVRAAEVPAA 235
Query: 288 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 347
A FN+ + T G+ L A+AAG + Y P G A+ A +
Sbjct: 236 AGLR-FNVGTGVETTDRGLHTLVAEAAG-AADDPEYAPARLGDVARSAL---------DA 284
Query: 348 RAAKDILGWRSTTNLPEDLKERFEEY 373
A ++LGW + E + + +
Sbjct: 285 GRAAEVLGWVPQVTIREGVARTVDYF 310
>gi|15895601|ref|NP_348950.1| UDP-glucose 4-epimerase [Clostridium acetobutylicum ATCC 824]
gi|337737550|ref|YP_004636997.1| UDP-glucose 4-epimerase [Clostridium acetobutylicum DSM 1731]
gi|384459060|ref|YP_005671480.1| UDP-glucose 4-epimerase [Clostridium acetobutylicum EA 2018]
gi|15025343|gb|AAK80290.1|AE007734_4 UDP-glucose 4-epimerase [Clostridium acetobutylicum ATCC 824]
gi|325509749|gb|ADZ21385.1| UDP-glucose 4-epimerase [Clostridium acetobutylicum EA 2018]
gi|336293218|gb|AEI34352.1| UDP-glucose 4-epimerase [Clostridium acetobutylicum DSM 1731]
Length = 301
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 136/329 (41%), Gaps = 72/329 (21%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTI---MTVGD--------------------ENSDKMKK 120
+GG IG ++ K LL GH+V++ M G+ EN+ K+++
Sbjct: 6 TGGAGFIGSHVVKSLLEHGHKVSVIDNMVHGNSSNLPDEVNIYKYDISEAEIENAFKIER 65
Query: 121 PPFNRFNEIVSAGGKTVWGDP---AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS 177
P N + +V DP A+V NV+G + + + +
Sbjct: 66 PEVVIHNAAQISVADSV-KDPLYDAKV-NVLGSIN-----------------ILEMCRKY 106
Query: 178 GVKQFLFISSAGI-----YKPADEPPHVEGDVVKPDAGHVQVEKYISENFS----NWASF 228
V++ ++ +SA I Y P DE H + VE Y++ N+
Sbjct: 107 AVRKVIYPASAAIFGEPKYLPIDEK-HPLNMISSYGVSKHTVEHYLNVYKKLYNINYTVL 165
Query: 229 RPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
R + G G + E F +++ + P+ I G+G Q + +V+D++ LA+
Sbjct: 166 RYSNVYGPGQDSSGEGGVVSIFAEKLTKGEPLCIYGNGNQIRDFVYVKDVTEANILALN- 224
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFY 344
+ ++I+N+ ++ T++ +AKL +A G VEI+H +A I F + Y
Sbjct: 225 --SLDNDIYNVSTNTKTTINDLAKLMCEAYGKEVEIMHKGERAGDI-------FESYMSY 275
Query: 345 AEPRAAKDILGWRSTTNLPEDLKERFEEY 373
+ A GW+ +L +KE + +
Sbjct: 276 DKIYNA---CGWKPKYDLKLGIKETIQSF 301
>gi|395777032|ref|ZP_10457547.1| oxidoreductase [Streptomyces acidiscabies 84-104]
Length = 326
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 23/243 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L L+ +GHEV ++ G + P + + ++V+ +
Sbjct: 7 GGSGHIGTFLVPRLVRAGHEVINISRGTSTA-YADAPEWGQVRQVVADRQQE--DTEGTF 63
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
G+ V + DVV+D LD+ + + + + L + Y P+D+ P E
Sbjct: 64 GDRVAALAPDVVVDLVCFTLDSATALVERLRGA-TGHLLHCGTLWRYGPSDKLPISETSG 122
Query: 205 VKPDAGHVQVEK-----YISENFSNWA----SFRPQYMIGSG-------NNKDCEEWFFD 248
P G +EK + +N S P +++G G N D W+
Sbjct: 123 TPP-VGEYGIEKDRIARMLKAETANGGLVTTSLHPGHIVGPGWEPVNALGNLDPTVWY-- 179
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
+ P+ IPG G + + H D++ A+++ +AA+ FN+V+ A+T+ G A
Sbjct: 180 TLSAGHPLKIPGIGAESMHHVHADDVAQSFERAIDHRDAAAGEDFNVVAPTALTVRGYAN 239
Query: 309 LCA 311
+ A
Sbjct: 240 IAA 242
>gi|387784397|ref|YP_006070480.1| Sterol-4-alpha-carboxylate 3-dehydrogenase,decarboxylating
[Streptococcus salivarius JIM8777]
gi|338745279|emb|CCB95645.1| Sterol-4-alpha-carboxylate 3-dehydrogenase,decarboxylating
[Streptococcus salivarius JIM8777]
Length = 326
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 138/354 (38%), Gaps = 83/354 (23%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEV-----------------TIMTVGDENSDK 117
KKVL+ +G +G Y+ +EL+ G++V GD + +
Sbjct: 2 KKVLV----TGATGFLGKYVVEELVDHGYQVRAFGRNHTIGQSLVNASVTFVQGDLTNQE 57
Query: 118 MKKPPFNRFNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ ++ AG TVWG P E D N+ + V + +
Sbjct: 58 DLTKACQEMDMVIHAGALSTVWG-PWE--------------DFYRTNVLGTKYVLEACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+ +K+ +++SS IY P D+ E D + + ++ YI ++ F
Sbjct: 103 ANIKRLVYVSSPSIYAAPRDQLGIKESDAPQEN----RLNNYIRSKLASEKLFKDYPDVS 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIV---RKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
RP+ + G G+ R++ +K +P+ G G Q ++ V +++ + LA
Sbjct: 159 SVILRPRGLFGIGDTS-----ILPRVLNLSQKIGIPLIGDGRQLMDMTCVENVALAIRLA 213
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAFPFRN 340
+E P+AA ++N+ + + + + G P+ P + I + F ++N
Sbjct: 214 LETPQAAGE-VYNITNGEPRVFRDLIEETLRGLGYPIRYRKIPAPLVSAISSSLEFIYKN 272
Query: 341 MHFYAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 375
+ EP +A +D LG+R + E +++ ++Y K
Sbjct: 273 LKLKGEPALTRYTYYLLRYSQTLDISKAERD-LGYRPKITISEGIEQYVQDYRK 325
>gi|448480283|ref|ZP_21604536.1| NAD-dependent epimerase/dehydratase [Halorubrum arcis JCM 13916]
gi|445822222|gb|EMA71994.1| NAD-dependent epimerase/dehydratase [Halorubrum arcis JCM 13916]
Length = 351
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 122/320 (38%), Gaps = 44/320 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEIVSAGGKTVWG 139
GG IG + +ELL +EV I G+ + D++ +R +E K
Sbjct: 30 GGTRFIGRHTVEELLAHDYEVAIFNRGNHENPFADDDRVTHVEGDRKDETALRAAKL--- 86
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH 199
+V V D V A AD V +++ISS Y A+E P
Sbjct: 87 ------SVEPDVVIDCVAYQPADVETATEIFAD------VDGYVYISSGSSYA-AEEIPK 133
Query: 200 VEGDVVKPDAGHVQVEKYISENFSNWAS------------------FRPQYMIGSGNNKD 241
EG+ Q E + N + RP + G + +
Sbjct: 134 REGETPLEPCTDEQAVDDDHETYGNRKAEGDRAVFAAAEAGVAAMAVRPCIVYGPHDYTE 193
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR++ V +PG G + A+V D++S L + E E ++ +N+ RA+
Sbjct: 194 RLDYWIDRVLTHDRVAVPGDGQNLWHRAYVEDVASALRVVAERGEPGAA--YNVGDRRAL 251
Query: 302 TLDGMAKLCAQAAGLPVEIVHY--DPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRST 359
TL + A AG+ E+V D AAG F + + A LGW ST
Sbjct: 252 TLRETLETIADVAGVDCELVTASDDALAAGGLEPDDFTLYREYPHLLDTCALADLGWEST 311
Query: 360 TNLPEDLKERFEEYVKIGRD 379
+ E + EE+ + RD
Sbjct: 312 P-VDEAIARTVEEHRESDRD 330
>gi|269796015|ref|YP_003315470.1| nucleoside-diphosphate-sugar epimerase [Sanguibacter keddieii DSM
10542]
gi|269098200|gb|ACZ22636.1| nucleoside-diphosphate-sugar epimerase [Sanguibacter keddieii DSM
10542]
Length = 329
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 27/262 (10%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG VI + + G++VT++ G ++ + +E+ + DP V
Sbjct: 10 GGSGVISSASVRLAVQRGYDVTVLNRGSSSTRSLP-------DEVRTLRADV--RDPGSV 60
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK-PADEPPHVEGD 203
+GG FD V+D + V+ D + Q++FISSA Y+ P P +E
Sbjct: 61 REALGGREFDAVVDWVAFTPEHVQQDVD-LFTGRTGQYVFISSASAYQTPPSRLPVLEST 119
Query: 204 VVK-PDAGHVQVEKYISENFSNWASFR----PQYMIGSGNNKDCEE------W-FFDRIV 251
++ P G+ Q +K E+ A++R P ++ + D W +R+
Sbjct: 120 PLRNPFWGYSQ-DKIACEDLLV-AAYRDAGFPATVVRPSHTYDQTSVPLDGGWTVVERMR 177
Query: 252 RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 311
+ V + G G I H D + + NP + F++ SD A+T D + + A
Sbjct: 178 AGKEVVVHGDGTSLWTITHTEDFALGFVPLLANPRTVG-DTFHITSDEALTWDHITQTLA 236
Query: 312 QAAGLPVEIVHYDPKA-AGIDA 332
+AAG+ +IVH A A +DA
Sbjct: 237 RAAGVEAKIVHVPSDAIAAVDA 258
>gi|332715613|ref|YP_004443079.1| NAD-dependent epimerase/dehydratase [Agrobacterium sp. H13-3]
gi|325062298|gb|ADY65988.1| NAD-dependent epimerase/dehydratase [Agrobacterium sp. H13-3]
Length = 307
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 116/262 (44%), Gaps = 33/262 (12%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG------GKTVW 138
GG IG +L ++L+ +GH VT+M ++ P + + +S + V
Sbjct: 7 GGGGFIGCHLVEDLVAAGHAVTVM-----GRSRLSSRPLSTEVQYISGELADSKLMRKVL 61
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGK----NLDAVRPVADWAKSSGVKQFLFISSAG-IYKP 193
D V ++V G + G+ NL + + + GVK+ L++SS G +Y
Sbjct: 62 RDIDAVAHLVSGTVPSTGDKDPGRDVEVNLLGTLSLLEDMAACGVKRILYLSSGGTVYGK 121
Query: 194 ADEPPHVEGDVVKPDAGH----VQVEKYISENFSNWASFRPQYMIGS-------GN--NK 240
E P EG ++ P + V +E Y+ + + A +P + S GN +
Sbjct: 122 PQEIPIPEGHILDPICSYGVVKVAIESYL-KLYEMKAGLQPIVIRASNPYGPYQGNLGVQ 180
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
+ + ++ +P+ I G G + HV+DL+S+ A+++ + I+N S
Sbjct: 181 GIIGTYLNLALKHQPIEIWGDGSTIRDYIHVKDLASLCVAALQSDKIG---IYNGGSGTG 237
Query: 301 VTLDGMAKLCAQAAGLPVEIVH 322
++ +A++ + G P+ I++
Sbjct: 238 TSVLHIAEVVQEITGNPIPIIY 259
>gi|311107665|ref|YP_003980518.1| GDP-L-fucose synthase [Achromobacter xylosoxidans A8]
gi|310762354|gb|ADP17803.1| GDP-L-fucose synthase [Achromobacter xylosoxidans A8]
Length = 317
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 112/274 (40%), Gaps = 32/274 (11%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G + +EL G+ ++T G + D + NRF V+ A+
Sbjct: 11 AGHRGMVGAAITRELQRRGYR-NVLTRGRDELDLENQNQVNRFFSTTPV--DVVYLAAAK 67
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD 203
VG ++ T V KNL V A ++GV++ LF+ S+ IY P + P + D
Sbjct: 68 VGGILANQTHPVEFLY--KNLMIQCNVIRAAYAAGVRKLLFLGSSCIY-PREAPQPIRED 124
Query: 204 V--------------VKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEE-WFFD 248
+ AG E Y E + + P + G +N D +
Sbjct: 125 ALLTGPLEATNEPYAIAKIAGLKLCEAYQREFGARFICAMPTNLYGQHDNYDLQSSHVLP 184
Query: 249 RIVRK---------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
++RK V I G+G +V DL+ + +E+P+A ++N+ + +
Sbjct: 185 ALIRKFHEGREAGQESVSIWGTGAPLREFLYVDDLAQACVMLMEHPQA--EGMYNIGAGQ 242
Query: 300 AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 333
+++ +A+L A+ G IV+ K G K
Sbjct: 243 DISIADLARLVARVVGYEGNIVYDSSKPDGTPRK 276
>gi|390450716|ref|ZP_10236302.1| NAD-dependent epimerase/dehydratase [Nitratireductor aquibiodomus
RA22]
gi|389661871|gb|EIM73462.1| NAD-dependent epimerase/dehydratase [Nitratireductor aquibiodomus
RA22]
Length = 316
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 127/319 (39%), Gaps = 50/319 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G H ++G + + L G E I+T + D ++ +F + A + A+
Sbjct: 13 AGHHGMVGSAMVRRLTAEGCE--IVTSNRYHVDLKRQVDVEKF--VRQAAPDVIVMAAAK 68
Query: 144 VGNVVGGVTF--DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEP--- 197
VG ++ T+ D + DN L + + A GV++FLF+ S+ IY K AD+P
Sbjct: 69 VGGILANDTYPADFLYDN----LMIEANIIEAAHQVGVEKFLFLGSSCIYPKFADQPIRE 124
Query: 198 ---------PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFF 247
P E + AG + Y + ++ S P + G G+N D +
Sbjct: 125 SALLTGELEPTNEWYAIAKIAGIKLAQSYRKQYGHDYISAMPTNLYGPGDNFDLDSSHVM 184
Query: 248 DRIVRK---------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
++RK R + I G+G HV D + L ++N N+ S
Sbjct: 185 PALIRKAHEAKLREDREIVIWGTGKPCREFLHVDDCADALVFLLKNYSGYEH--VNVGSG 242
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK--KAFPFRNMHFYAEPRAAKDILGW 356
+++ + KL + G +IVH K G K A R M GW
Sbjct: 243 EDISILDLTKLVCEVVGFEGKIVHDLTKPDGTPRKLMSAEKLRGM-------------GW 289
Query: 357 RSTTNLPEDLKERFEEYVK 375
R +L + +K ++ +++
Sbjct: 290 RPHISLGDGIKSAYDAFLR 308
>gi|77165006|ref|YP_343531.1| NAD-dependent epimerase/dehydratase [Nitrosococcus oceani ATCC
19707]
gi|76883320|gb|ABA58001.1| NAD-dependent epimerase/dehydratase [Nitrosococcus oceani ATCC
19707]
Length = 320
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 91/229 (39%), Gaps = 20/229 (8%)
Query: 159 NNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQV 214
N N+ V + A +GV++ +F S+ G PP E + KP A +
Sbjct: 91 NFAVNVHGTLNVMNAAVEAGVERLIFASTGGALIGDATPPVDERSLPKPISPYGASKLCG 150
Query: 215 EKYISENFSNW------ASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI 268
E Y ++ F Y S + K F +++ P+ I G G +
Sbjct: 151 EAYCHAFAKSYHLETVCLRFGNVYGPHSAHKKGAVTTFIKALMKDEPIVIYGDGSASRDY 210
Query: 269 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 328
HV DL S + A+E P S F+L S R T+ +A + Q AG P +H+
Sbjct: 211 IHVEDLGSGIAAALEVP-VEGSETFHLASGRETTVLELADILRQVAGKPHHPIHFKA--- 266
Query: 329 GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG 377
A++ RN Y + R A G++ L + L +E ++ G
Sbjct: 267 ---ARRGEVSRNFATYEKARCA---FGFKPKWRLEDGLAATWEWFISQG 309
>gi|170782054|ref|YP_001710386.1| oxidoreductase [Clavibacter michiganensis subsp. sepedonicus]
gi|169156622|emb|CAQ01774.1| putative oxidoreductase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 321
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 134/320 (41%), Gaps = 30/320 (9%)
Query: 79 IVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTV 137
+V + GH IG +L L+ SGH+V ++ G + + P ++R + V +
Sbjct: 3 VVVIGATGH--IGTFLVPRLVDSGHDVVAVSRGTREPYR-QSPLWDRVERVRVDRDAEDA 59
Query: 138 WGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP 197
G A + + + +VV+D + R + + + V+ + I S + +
Sbjct: 60 AGTFA---DRIAALAPEVVVDLVCFTPASARHLVEGLRGR-VRHLVHIGSIWTHGLSTAL 115
Query: 198 PHVEGDVVKPDAGH----VQVEKY-ISENFS---NWASFRPQYMIGSG-------NNKDC 242
P E D +P + ++E+Y I+E+ P ++ G G N D
Sbjct: 116 PLREDDPKEPFGEYGVQKAEIERYLIAESRGGGLQCTVVHPGHISGGGWPVITPVGNLDP 175
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
W + P+ +PGSG + + H D++ ++ LA+ N E + F+ VSDRA++
Sbjct: 176 AVWTA--LAAGDPLAVPGSGSETMHHVHADDVAQVVQLAIANRETSVGESFHAVSDRALS 233
Query: 303 LDGMAKLCAQAAGLPVEIVHYD-----PKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWR 357
+ G A+ A G E+ H D + A ++ + A A+D+LG+
Sbjct: 234 VRGFARAAAAWFGREPELEHLDWDGFRARTEPDHADASWQHLSRSHVASIDKARDVLGYV 293
Query: 358 STTNLPEDLKERFEEYVKIG 377
E +E E V+ G
Sbjct: 294 PRYTSEEAAREAVEWMVRAG 313
>gi|302038296|ref|YP_003798618.1| putative uDP-glucose 4-epimerase [Candidatus Nitrospira defluvii]
gi|300606360|emb|CBK42693.1| putative UDP-glucose 4-epimerase [Candidatus Nitrospira defluvii]
Length = 332
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 123/318 (38%), Gaps = 44/318 (13%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG + +EL G EV ++ +G++ + K P K +G +
Sbjct: 8 TGGAGCIGIQVCRELDRRGIEVHLLDLGEQIARVRKALP---------EKTKVFYGSILD 58
Query: 144 VGNV------VGGVTFDVVLDNNGK-----------NLDAVRPVADWAKSSGVKQFLFIS 186
+ ++ G V L + N+D + V D A +K+ +F S
Sbjct: 59 ISSIREAMDGCGAVIHLAALLGVRRTEVNRLRCLEINVDGTKRVLDCAIQHRIKRLVFAS 118
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS-NWASFRPQY------MIGSGNN 239
S+ +Y E P E + + + V K E +A P++ +
Sbjct: 119 SSEVYGEPIENPITEETITQGKTVYA-VSKLAGEELCIGYAQRYPEFEHVILRFFNAYGP 177
Query: 240 KDCEEWFFDRIVRK----RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
++ + ++ +P+ I GSG Q + + D + + A+ PEA I
Sbjct: 178 YQAAQFVLPKFIQNAMTGKPIVINGSGDQIRSYCYSEDTARGVVEALLRPEAVGQVINLG 237
Query: 296 VSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAGIDAKKAFPFRNMH-FYAEPRAAKDI 353
SDR +L +A L +A+G PVEI + AA R +H Y AK +
Sbjct: 238 NSDRPTSLKELADLVVKASGNSPVEIKY----AADFQGTDRHASREIHRRYCSGEKAKRL 293
Query: 354 LGWRSTTNLPEDLKERFE 371
LG+ S L + ++ E
Sbjct: 294 LGFESRVTLEDGIRRIIE 311
>gi|448319353|ref|ZP_21508852.1| NAD-dependent epimerase/dehydratase [Natronococcus amylolyticus DSM
10524]
gi|445607956|gb|ELY61827.1| NAD-dependent epimerase/dehydratase [Natronococcus amylolyticus DSM
10524]
Length = 232
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 227 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 286
S RP + G + + +++ DR+ R V +PG G + A+V D++S L L E +
Sbjct: 60 SVRPCIVYGPHDYTERLDFWIDRVNRFDRVVVPGDGTNLWHRAYVEDVASALRLVAEEGD 119
Query: 287 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNM-H 342
A + +N+ R VTL+ M L A VE+V P+ A I+ +R H
Sbjct: 120 AGEA--YNVGDRRLVTLEEMVTLIADQLDTTVEVVTAGPRELEAGSIEPDDYVLYREYPH 177
Query: 343 FYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD 379
+ + A LGW ST + E + E++++ RD
Sbjct: 178 VLSTAKLAA--LGWESTP-IGEAMARSVEDHLESDRD 211
>gi|346323619|gb|EGX93217.1| reductase [Cordyceps militaris CM01]
Length = 327
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 115/275 (41%), Gaps = 42/275 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G +A++ L GH+VT+ FNR N+ AG + + GD
Sbjct: 7 GGTHYVGRLVAEQALARGHQVTV---------------FNRGNKPAPAGARVLIGDRLAE 51
Query: 145 GN--VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY--KPADEPPHV 200
+ + G+TFD V+D + AV+ A A ++ + F+SS +Y K A P
Sbjct: 52 NSYAALDGLTFDAVIDTWALDTSAVKQ-AIAALQGRMEHYAFVSSISVYDHKAAPAPYDE 110
Query: 201 EGDVVKPDAGHVQV--EKYISENFSNWAS-----FRPQYMIGSGNNKDCE-EWFFDRIVR 252
V+ D V+ +K SE + + RP ++G G + W+ R+ R
Sbjct: 111 TSPVLDMDRTPVRYCKDKLGSEREAAASGVPTLIVRPGLIVGPGESTPGRLPWWLRRMER 170
Query: 253 KRPVPIPGS---GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA-VTLDGMAK 308
P PG +QF + RDL++ L ++ E IF+ VS +TL G+ +
Sbjct: 171 GGPTLAPGPEDLALQFID---GRDLAAFL---LDGAERKLHGIFDAVSSPGYITLAGLLE 224
Query: 309 LCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 343
AAG + D G D KA + M
Sbjct: 225 AANDAAGGRASLHWVD----GDDVAKAIAGKRMEI 255
>gi|112359369|gb|ABI15605.1| UDP-glucose 4-epimerase [Spironucleus barkhanus]
Length = 306
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 15/126 (11%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F DR +R P+ I G G Q + +V+DL + A + +S +FN+ + R+ +
Sbjct: 182 FIDRALRGIPITIFGDGEQTRDFVYVKDL---VCGAFALLDGGASGVFNIGTGRSTAVQR 238
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
+A++CA G EIVH +P+ I + P + + +GWR+ T +
Sbjct: 239 LAEICADLGG--SEIVHAEPRDGDIKYSLSCPEKIF----------ETVGWRAETEFLDG 286
Query: 366 LKERFE 371
LK ++
Sbjct: 287 LKATWQ 292
>gi|406935036|gb|EKD69122.1| Nucleoside-diphosphate-sugar epimerase [uncultured bacterium]
Length = 339
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 154 DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK-----PADEPPHVEGDVVKPD 208
D V+D + + + P A A S + Q++FIS+ +Y PA E ++
Sbjct: 77 DAVIDMSCYTKEELTP-AIRAFSKKISQYIFISTCSVYGVLKYLPASEEHPLDTGESNSM 135
Query: 209 AGH--VQVEK---YISENFS-NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSG 262
G ++ EK Y ++N N RP Y+ G + + +F DRI ++ P+ P G
Sbjct: 136 YGREKIKCEKELLYSAKNKDFNVTILRPTYIYGPWDYTERLFYFIDRIYKQVPIFFPSGG 195
Query: 263 MQ-FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
N +V+DL+ + + N E A + I+N S+ ++ KL + V++V
Sbjct: 196 QDPMFNAIYVKDLARQIAGLLLN-EGAYNQIYNAASNDSLYFSEFLKLIGNSLSQEVKLV 254
Query: 322 H--YD--PKAAGIDAKKAFPFRNMH 342
H YD KAAG +FP+ H
Sbjct: 255 HVSYDEYKKAAG---GLSFPYTRYH 276
>gi|254433464|ref|ZP_05046972.1| NAD dependent epimerase/dehydratase family [Nitrosococcus oceani
AFC27]
gi|207089797|gb|EDZ67068.1| NAD dependent epimerase/dehydratase family [Nitrosococcus oceani
AFC27]
Length = 296
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 91/229 (39%), Gaps = 20/229 (8%)
Query: 159 NNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQV 214
N N+ V + A +GV++ +F S+ G PP E + KP A +
Sbjct: 67 NFAVNVHGTLNVMNAAVEAGVERLIFASTGGALIGDATPPVDERSLPKPISPYGASKLCG 126
Query: 215 EKYISENFSNWA------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI 268
E Y ++ F Y S + K F +++ P+ I G G +
Sbjct: 127 EAYCHAFAKSYHLETVCLRFGNVYGPHSAHKKGAVTTFIKALMKDEPIVIYGDGSASRDY 186
Query: 269 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 328
HV DL S + A+E P S F+L S R T+ +A + Q AG P +H+
Sbjct: 187 IHVEDLGSGIAAALEVP-VEGSETFHLASGRETTVLELADILRQVAGKPHHPIHFKA--- 242
Query: 329 GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG 377
A++ RN Y + R A G++ L + L +E ++ G
Sbjct: 243 ---ARRGEVSRNFATYEKARCA---FGFKPKWRLEDGLAATWEWFISQG 285
>gi|448495643|ref|ZP_21610088.1| NAD-dependent epimerase/dehydratase [Halorubrum californiensis DSM
19288]
gi|445687736|gb|ELZ40011.1| NAD-dependent epimerase/dehydratase [Halorubrum californiensis DSM
19288]
Length = 330
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 122/321 (38%), Gaps = 46/321 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENS-----DKMKKPPFNRFNEIVSAGGKTVWG 139
GG IG + +ELL +EV + G+ + D++ +R +E K
Sbjct: 9 GGTRFIGRHTVEELLAHDYEVAMFNRGNHENPFAGDDRVTHVEGDRKDETALRAAKL--- 65
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH 199
+V + D V A AD V +++ISS Y A+E P
Sbjct: 66 ------SVEPDIVIDCVAYQPADVETATEIFAD------VDGYVYISSGSSYA-AEEIPK 112
Query: 200 VEGDVVKPDAGHVQVEKYISENFSNWAS------------------FRPQYMIGSGNNKD 241
EG+ Q E + N + RP + G + +
Sbjct: 113 REGETPLEPCTDAQATDDTHETYGNRKAEGDRAVFAAAEAGVSAMAVRPCIVYGPYDYTE 172
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR++ + V +PG G + A+V D++S L E E ++ +N+ RA+
Sbjct: 173 RLDYWIDRVLTQDRVVVPGDGQNLWHRAYVEDVASALRAVAERGEPGAA--YNVGDRRAL 230
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS 358
TL + A A + E+V A G+D +R + A D LGW S
Sbjct: 231 TLRETLETIADVADVDCEVVPASEDALAAGGLDPDDFVLYREYPHLLDTCALAD-LGWES 289
Query: 359 TTNLPEDLKERFEEYVKIGRD 379
T + E + EE+ + RD
Sbjct: 290 TP-VAEAMARTVEEHRESDRD 309
>gi|432330822|ref|YP_007248965.1| nucleoside-diphosphate-sugar epimerase [Methanoregula formicicum
SMSP]
gi|432137531|gb|AGB02458.1| nucleoside-diphosphate-sugar epimerase [Methanoregula formicicum
SMSP]
Length = 313
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 126/329 (38%), Gaps = 71/329 (21%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM----TVGDENSDKMKKPPF---------------- 123
+GG IG ++A+ L+ +GHEV I + EN + + P
Sbjct: 6 TGGAGFIGSHIAEGLVANGHEVVIFDNFFSGKKENVNDLLAGPNASLIEGTILDSATLRK 65
Query: 124 ------NRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS 177
F+E A DP E V NL V A+
Sbjct: 66 AFEGADGIFHEAAIASVPRSVADPRETHEV---------------NLSGTVNVLMAARDC 110
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS---------- 227
GVK+ +F SSA +Y E P E + P + + V K EN+ + S
Sbjct: 111 GVKKVVFASSAAVYGDKPELPKRESMMPDPLSPYA-VTKSAGENYCSVFSRLYGMQCVSL 169
Query: 228 -----FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV 282
F P+ GS + ++ + + K PV I G G Q + +V+D+ LA+
Sbjct: 170 RYFNVFGPRQDPGSPYSGVITKFITNTLAHK-PVTIFGDGKQTRDFVYVKDVVRANILAM 228
Query: 283 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMH 342
E+P S ++N+ S + L + ++ A +G+ V + P A + H
Sbjct: 229 ESP---VSGVYNVASGSQLDLMELLEIVANVSGIRVPVEFVQPAAGDV----------RH 275
Query: 343 FYAEPRAAKDILGWRSTTNLPEDLKERFE 371
A+ A++ILG+ ++ E L E +
Sbjct: 276 SVADIAVAQEILGYVPGCSMREGLGETVQ 304
>gi|149920314|ref|ZP_01908785.1| NAD dependent epimerase/dehydratase family protein [Plesiocystis
pacifica SIR-1]
gi|149818901|gb|EDM78341.1| NAD dependent epimerase/dehydratase family protein [Plesiocystis
pacifica SIR-1]
Length = 340
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 95/233 (40%), Gaps = 38/233 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
+VLI+ GG +G + + + +GHEVT+ G N + F E+ G
Sbjct: 2 RVLIL----GGTGFLGPHFVRAAVAAGHEVTLFNRGKTNP--------HLFPELPKLRGD 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK--- 192
GD A + G FDVV+D +G + V A S+ +Q+LF+SS Y
Sbjct: 50 RREGDLA----ALEGKHFDVVVDTSGYVPEHVSATASLLSSA--RQYLFVSSVSAYANQG 103
Query: 193 --------PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS------FRPQYMIGSGN 238
P E P D V+ G + K + E + A RP ++G G+
Sbjct: 104 QAGLTADAPLAEHPEPGNDDVRQFYGPL---KALCEQAAEAAMPGKTTVIRPGLIVGPGD 160
Query: 239 NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
D ++ R+ R V PG + RDL++ + L +E + + N
Sbjct: 161 PTDRFTYWPVRLARGGEVLAPGQPEDPVQLIDARDLAAFMLLCLERGQTRTYN 213
>gi|448423482|ref|ZP_21582011.1| NAD-dependent epimerase/dehydratase [Halorubrum terrestre JCM
10247]
gi|445683319|gb|ELZ35718.1| NAD-dependent epimerase/dehydratase [Halorubrum terrestre JCM
10247]
Length = 330
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 123/321 (38%), Gaps = 46/321 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEIVSAGGKTVWG 139
GG IG + +ELL +EV I G+ + D++ +R +E K
Sbjct: 9 GGTRFIGRHTVEELLAHDYEVAIFNRGNHENPFADDDRVTHVEGDRKDETALRAAKL--- 65
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH 199
+V V D V A AD V +++ISS Y A+E P
Sbjct: 66 ------SVEPDVVIDCVAYQPADVETATEIFAD------VDGYVYISSGSSYA-AEEIPK 112
Query: 200 VEGDVVKPDAGHVQVEKYISENFSNWAS------------------FRPQYMIGSGNNKD 241
EG+ Q E + N + RP + G + +
Sbjct: 113 REGETPLEPCTDEQAVDDDHETYGNRKAEGDRAVFAAAEAGVAAMAVRPCIVYGPHDYTE 172
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR++ V +PG G + A+V D++S L + E E ++ +N+ RA+
Sbjct: 173 RLDYWIDRVLTHDRVVVPGDGQNLWHRAYVEDVASALRVVAERGEPGAA--YNVGDRRAL 230
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS 358
TL + A AG+ E+V A G++ +R + A D LGW S
Sbjct: 231 TLRETLETIADVAGVDCELVTASDDALAAGGLEPDDFTLYREYPHLLDTCALAD-LGWES 289
Query: 359 TTNLPEDLKERFEEYVKIGRD 379
T + E + EE+ + RD
Sbjct: 290 TP-VDEAMARTVEEHRESDRD 309
>gi|406919632|gb|EKD57873.1| hypothetical protein ACD_57C00116G0001 [uncultured bacterium]
Length = 302
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 128/313 (40%), Gaps = 43/313 (13%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV----WG 139
+GG IG ++ ++LL +GH+V ++ +N KK + + + A + + +
Sbjct: 6 TGGAGFIGSHVTRQLLDAGHKVVVV----DNLSCGKKESVDSRAQFIEADIRNIPDSAFK 61
Query: 140 DPAEVGNVVGGVTFDVVLDNNGK----NLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
+ V ++ G + +++ K N+ + + + +GVK+ +F SSA +Y D
Sbjct: 62 NVDSVIHMAGLIIVPESVEDPIKYADNNVIGTIGLLESMRKNGVKKIIFSSSACVYGTPD 121
Query: 196 EPPHVEGDVVKPD----AGHVQVEKYISENFSNW-------ASFRPQYMIGSGNNKDCEE 244
P E V+PD A +E ++ +N+ F P G G + E
Sbjct: 122 TLPIKEDAPVRPDNPYGASKAAIEAFLQAYNANFNFDVTILRYFNPY---GPGEMHEPET 178
Query: 245 W----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
F + K+P+P+ +G Q + ++ DL + VE NIFN+ +++
Sbjct: 179 HAIPNFIKAALSKKPIPLYWNGAQIRDFIYIEDL---VRAHVEVINQTGLNIFNIGTEKG 235
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
V + + G V I + + A YA K +GW++
Sbjct: 236 VVVKEVLDEIFSIIGYKVPIDDLGKRPGDVQAN----------YASSEKLKKAVGWQAKV 285
Query: 361 NLPEDLKERFEEY 373
+L E LK+ Y
Sbjct: 286 DLKEGLKKTIGFY 298
>gi|448458358|ref|ZP_21596149.1| NAD-dependent epimerase/dehydratase [Halorubrum lipolyticum DSM
21995]
gi|445809695|gb|EMA59735.1| NAD-dependent epimerase/dehydratase [Halorubrum lipolyticum DSM
21995]
Length = 339
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 106/261 (40%), Gaps = 32/261 (12%)
Query: 77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT 136
VLI+ GG +I + + L GH+VT +T G+ ++D F R +
Sbjct: 3 VLII----GGTGLISTAITRLLAADGHDVTCLTRGETDADLPSSVSFRRADRT------- 51
Query: 137 VWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVR-PVADWAKSSGVKQFLFISSAGIY-KPA 194
D A + + V FD V+D + + R VA +A + Q++F S+ +Y +P
Sbjct: 52 ---DRAALADAVSDDDFDCVIDMVCFDAETAREAVAVFADRT--DQYVFCSTVDVYHRPP 106
Query: 195 DEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS--------FRPQYMIGSG----NNKDC 242
+ P E +P K +E+ A RP G G +
Sbjct: 107 ERNPVREDASREPPVSEYAAGKAAAEDVFRAADGDAFATTIVRPWSTYGEGGPVLHTLGT 166
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
++ DRI + +PV + G G H D++ AV N + A +++ S+ +T
Sbjct: 167 GTYYIDRIRKGKPVLVHGDGTSLWGPCHRDDVARAFVNAVGNTD-AFGEAYHVTSEETMT 225
Query: 303 LDGMAKLCAQAAGLPV-EIVH 322
+ A+A P E+VH
Sbjct: 226 WNQYHLRVARALDAPEPELVH 246
>gi|421100131|ref|ZP_15560769.1| NADH(P)-binding protein, PF13460 family [Leptospira borgpetersenii
str. 200901122]
gi|410796834|gb|EKR98955.1| NADH(P)-binding protein, PF13460 family [Leptospira borgpetersenii
str. 200901122]
Length = 330
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 137/315 (43%), Gaps = 47/315 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-FNRFNEIV---SAGGKTVWG 139
+GG +G L LL G++VT++ + D +K+ P + + +T+ G
Sbjct: 11 TGGAGYVGAMLVPRLLSEGYKVTVLDLMIYGEDVLKEHPNLTKIKGDIRDQDVLNRTILG 70
Query: 140 DPAEVGNVVGGVTFDVVLDNN---GK--NLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+ + + ++ D + N GK NLDA RP+ + +K +GVK+F++ SS+ +Y
Sbjct: 71 HDSVIH--LACISNDPSFELNPDLGKSINLDAFRPLVEISKKNGVKRFIYASSSSVYGVK 128
Query: 195 DEPPHVEGDVVKPDAGHVQ--------VEKYISENFSNWASFRPQYMIGSGNNKDCE--- 243
+E E +++P + + + +Y +++F+ + RP + G + +
Sbjct: 129 EESNVTEDFLLEPLTDYSKFKADCEKILAEYQTDDFTT-VTIRPATVCGYSPRQRLDVVV 187
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSDRAVT 302
+ KR + + G G Q H+ D+ + + P E + I+N T
Sbjct: 188 NILTNLAYHKREISVFG-GTQLRPNIHIDDMVDAYLILLRAPKEKVAGEIYN-AGYLNFT 245
Query: 303 LDGMAKLCAQAAGLPVEIVHY---DPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRST 359
+ +A + + G V++V D ++ I + K F + LG+R+
Sbjct: 246 VSEIANMVKEVVGEDVKLVTTPTNDNRSYHISSDKIF---------------NQLGFRAN 290
Query: 360 TNLP---EDLKERFE 371
++ EDLK+ FE
Sbjct: 291 RSIKLAAEDLKKAFE 305
>gi|270291986|ref|ZP_06198201.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus
sp. M143]
gi|270279514|gb|EFA25356.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus
sp. M143]
Length = 326
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 138/351 (39%), Gaps = 77/351 (21%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-------------TVGDENSDKMKKP 121
KKVL+ +G +G Y+ +EL SG++V TV D K+
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQSGYQVRAFGRNRKVGQSLETSTVAFFQGDLTKQE 57
Query: 122 PF----NRFNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ +V AG TVWG P E D N+ + V D +
Sbjct: 58 DLAQACQEMDMVVHAGALSTVWG-PWE--------------DFYQTNVLGTKYVLDACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P D+ E D + + + YI ++ F
Sbjct: 103 AGIQRLVYVSSPSIYAAPRDQLAIKESDAPQEN----NLNNYIRSKLASEKLFKDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 159 SIILRPRGLFGIGDTSILPRVL--KLSQKVGIPLIGDGRQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD-PKAAGIDAKKAFPFRNMHF 343
P+ AS ++N+ + + + + G P+ P + I + F ++ +
Sbjct: 217 PQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPITYRKVSAPLLSVIASSLEFLYKVLKL 275
Query: 344 YAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 375
EP +A +D LG+R ++ E +++ ++Y K
Sbjct: 276 KGEPALTRYTYYLLRYSQTLDISKAERD-LGYRPQISISEGIEQYVQDYRK 325
>gi|258645455|ref|ZP_05732924.1| UDP-glucose 4-epimerase [Dialister invisus DSM 15470]
gi|260402806|gb|EEW96353.1| UDP-glucose 4-epimerase [Dialister invisus DSM 15470]
Length = 306
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 128/326 (39%), Gaps = 63/326 (19%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI--------------------MTVGDENS 115
K+LI +GG IG +L+ LL +GHE+TI M + DE
Sbjct: 2 KILI----TGGAGFIGSHLSDALLAAGHEITIIDDLSSGTKDFLPKEAEFLKMDIRDEKL 57
Query: 116 DKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAK 175
+ K F+ I +T+ PA + N LD + N+ + V + A+
Sbjct: 58 TDIFKE--RHFDIIYHEAAQTMV--PASIDN--------PYLDAD-INISGMLRVLEAAR 104
Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF---------SNWA 226
+ V++ +F SSA +Y P E + P + + + K+++E + ++
Sbjct: 105 KTDVQKIIFSSSAAVYGDNPALPLTENLIPAPSSFY-GLTKWMTEKYLALYHKIYELSYT 163
Query: 227 SFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV 282
R + G D E F + +P+ I G G Q + V D+ S A+
Sbjct: 164 VLRYSNVYGPRQGADGEGGVIYIFAKSLAENKPITIFGDGRQTRDFISVHDVISANLAAL 223
Query: 283 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMH 342
A I N+ ++ ++L+ +A AAG +++ Y P G +
Sbjct: 224 HQ---ADGEIINVSTETELSLNDLASKMIAAAGCSEDLLRYGPPRTGDIYRSCL------ 274
Query: 343 FYAEPRAAKDILGWRSTTNLPEDLKE 368
+ AK +L W + N+ + L E
Sbjct: 275 ---SNQKAKTLLHWTPSRNIKDGLTE 297
>gi|320160985|ref|YP_004174209.1| putative UDP-glucose 4-epimerase [Anaerolinea thermophila UNI-1]
gi|319994838|dbj|BAJ63609.1| putative UDP-glucose 4-epimerase [Anaerolinea thermophila UNI-1]
Length = 308
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 130/326 (39%), Gaps = 69/326 (21%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG ++ + + +GH+V ++ +K P RF + DP E
Sbjct: 6 TGGAGFIGSHVVDQFIEAGHDVVVVDNLSTGREKNLNPK-ARFYRVDIR-------DP-E 56
Query: 144 VGNVVGGVTFDV----VLDNNGKNLDAVRPVAD-----------------WAKSSGVKQF 182
+ V F++ V+D++ ++ R VAD + GV++
Sbjct: 57 LRKV-----FEIEKPEVVDHHAAQMNVRRSVADPLYDADVNVRGSVHLLELCREYGVRKI 111
Query: 183 LFISSAG------IYKPADEPPHVEGDVVKPDAGHVQVEKYI---SENFS-NWASFRPQY 232
++ISS G +Y P DE H + E Y+ +N+ ++ FR
Sbjct: 112 IYISSGGAVYGEPVYLPCDEE-HPVRPLCPYGLTKYAFELYLYIYQQNYGIDYTVFRYPN 170
Query: 233 MIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
+ G + E F +++R PV I G+G Q + HV D + LA+ E+
Sbjct: 171 VYGPRQDPLGEAGVIAIFTGQMLRGEPVTIYGTGDQVRDYVHVYDCARANLLAL---ESG 227
Query: 289 SSNIFNLVSDRAVTLDGM---AKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 345
S ++NL S + T++ + K +G+P +Y P G Y
Sbjct: 228 SGRVYNLGSGKGTTVNELFQRLKAITGYSGMP----NYAPAKLG---------ETFKIYL 274
Query: 346 EPRAAKDILGWRSTTNLPEDLKERFE 371
+ AK+ LGW T +L E L+ E
Sbjct: 275 NAQRAKEELGWVPTISLEEGLRNTVE 300
>gi|385763939|gb|AFI78762.1| NAD-dependent epimerase/dehydratase [uncultured bacterium ws198A12]
Length = 328
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 128/319 (40%), Gaps = 46/319 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE--IVSAGGKTVWGDP 141
+G + IG +L L G +V + N D +K P E I +A + D
Sbjct: 7 TGANGFIGRHLTTAQLALGRQVVAVDQKVTNLDDIKHDPMLTIFETDIRNADAMSDAIDG 66
Query: 142 AEVGNVVGGVTFDVVLDNN---GKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
A + + +V D + N+DA+ + A+++ V++F+ S+ G+Y P D P
Sbjct: 67 ANIVFHLAAAHLEVTADESHYRAINVDALARLLQLAEAAAVERFVHCSTVGVYGPIDSLP 126
Query: 199 HVEGDVVKPDAGHVQVEKYISENFSNWAS---------FRPQYMIGSGNNKDCEEWFFDR 249
E +PD + + K E+ A+ RP ++ G G + +
Sbjct: 127 ADETTACRPDIAY-EKTKLDGEDLVRKAAGAGGLSTVIIRPSWVYGPGCPRTLK--LLRS 183
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
I RK+ + GS + ++ DL +P S F + +A+++ G+ +
Sbjct: 184 IARKKFFFV-GSANNMRHPLYIDDLLQAFERVATHPITPGST-FIIAGPQAISVRGLVQE 241
Query: 310 CAQAAGLPVEIVHYDP-------KAAGIDA-KKAFPF---------RNMHFYAE-----P 347
++ G V Y+P A G +KAF R++ F+ E
Sbjct: 242 ASKVLG-----VQYNPIRLPKTLVAVGCTMIEKAFAVLKRQPPVSSRSLKFFTESSAFST 296
Query: 348 RAAKDILGWRSTTNLPEDL 366
R AKD L + + T LP+ L
Sbjct: 297 RKAKDELNFDAQTALPDGL 315
>gi|448374298|ref|ZP_21558183.1| NAD-dependent epimerase/dehydratase [Halovivax asiaticus JCM 14624]
gi|445660975|gb|ELZ13770.1| NAD-dependent epimerase/dehydratase [Halovivax asiaticus JCM 14624]
Length = 337
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 100/248 (40%), Gaps = 34/248 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA-GGKTVWGDPAE 143
GG IG +L +ELL +EVT+ G+ + PF + + G +T GD E
Sbjct: 8 GGTRFIGRHLVEELLEHEYEVTLFNRGNHEN------PFADTDGVDHVQGDRTDDGDLVE 61
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD 203
V FD V +++ V D V +++ISS Y D P EG
Sbjct: 62 AAAVEPDAVFDCVA-YFPRDVRQATTVFD-----DVDAYVYISSGAAYGREDLPKR-EGF 114
Query: 204 VVKPDAGHVQVEKYISENFS------------------NWASFRPQYMIGSGNNKDCEEW 245
+ Q SE + N S RP + G + + ++
Sbjct: 115 TPLCECTDEQATADESETYGPRKAEGDRVVFEAAADGVNAMSVRPPIVYGPHDYTERLDY 174
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
+ DRI R V +PG G + +V D++S + + E E + +N+ RAVTL G
Sbjct: 175 WIDRIHRFDRVVLPGDGTNLWHRVYVEDVASGMRIVAEEGEPGEA--YNVGDQRAVTLRG 232
Query: 306 MAKLCAQA 313
M +L ++
Sbjct: 233 MLELIDES 240
>gi|456873239|gb|EMF88648.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira santarosai str. ST188]
Length = 330
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 136/314 (43%), Gaps = 45/314 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-FNRFNEIVSAGG---KTVWG 139
+GG +G L LL G++VT++ + + +K+ P + + G +T+ G
Sbjct: 11 TGGAGYVGAMLVPRLLNEGYKVTVLDLMIYGEEVLKEHPNLTKIQGDIRDQGILNQTIPG 70
Query: 140 DPAEVGNVVGGVTFDVVLDNN---GK--NLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+ + + ++ D + N GK NLDA RP+ + ++ SGVK+F++ SS+ +Y
Sbjct: 71 HDSVIH--LACISNDPSFELNPNLGKSINLDAFRPLVEISRRSGVKRFIYASSSSVYGVK 128
Query: 195 DEPPHVEGDVVKPDAGH----VQVEKYISENFSN---WASFRPQYMIGSGNNKDCE---E 244
+EP E ++P + EK +SE S+ + RP + G + +
Sbjct: 129 EEPNVTEDFSLEPLTDYSKFKADCEKILSEYQSSDFTTVTIRPATVCGYSPRQRLDVVVN 188
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSDRAVTL 303
+ KR + + G G Q H+ D+ + + P E + I+N T+
Sbjct: 189 ILTNLAYHKREISVFG-GTQLRPNIHIGDMVDAYLVLLRAPKEKIAGEIYN-AGYLNFTV 246
Query: 304 DGMAKLCAQAAGLPVEIVHY---DPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
+A + + G V++V D ++ I + K + + LG+R+
Sbjct: 247 SEIANMVKEVVGEDVKLVTTPTNDNRSYHISSDKIY---------------NQLGFRANR 291
Query: 361 NL---PEDLKERFE 371
++ EDLK+ FE
Sbjct: 292 SIKLAAEDLKKAFE 305
>gi|260063374|ref|YP_003196454.1| GDP-fucose synthetase [Robiginitalea biformata HTCC2501]
gi|88783468|gb|EAR14640.1| GDP-fucose synthetase [Robiginitalea biformata HTCC2501]
Length = 314
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 95/225 (42%), Gaps = 36/225 (16%)
Query: 174 AKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPDAGHVQVEKYISE 220
A +GV +F+F+ S+ IY K A++P P EG + AG ++ +
Sbjct: 95 AHEAGVPKFVFLGSSCIYPKMAEQPIREDALLTGPLEPTNEGYALAKIAGVRLIQALRDQ 154
Query: 221 NFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPIPGSGMQFTNIAH 270
++ S P + G +N D E ++RK PV + GSG H
Sbjct: 155 YNRDYVSLMPTNLYGPNDNFDLETSHVLPALIRKFHEAKQNDNAPVTLWGSGSPRREFLH 214
Query: 271 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 330
V DL+ + A+ENP +++N+ + +T+ +A+ + G EI +D
Sbjct: 215 VDDLARAVVHALENP--LPDHLYNVGTGSDITIKELARTVQRIVGHTGEI-RWDTSKPDG 271
Query: 331 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
+K ++H LGW++ L + +K +E Y++
Sbjct: 272 TPRKLLDVSHIH----------ALGWKAEIGLEDGIKRAYEWYLE 306
>gi|418737924|ref|ZP_13294320.1| NADH(P)-binding protein, PF13460 family [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|410746098|gb|EKQ99005.1| NADH(P)-binding protein, PF13460 family [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
Length = 330
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 134/319 (42%), Gaps = 55/319 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF-----------NRFNEIVSA 132
+GG +G L LL G++VT++ + D +K+ P N N+ +
Sbjct: 11 TGGAGYVGAMLVPRLLSEGYKVTVLDLMIYGEDVLKEHPNLTKVKGDIRDQNLLNQTIPG 70
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGK--NLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ + + +F++ N GK NLDA RP+ + +K VK+F++ SS+ +
Sbjct: 71 HDSVI-----HLACISNDPSFELN-PNLGKSINLDAFRPLVEISKKHAVKRFIYASSSSV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQ--------VEKYISENFSNWASFRPQYMIGSGNNKDC 242
Y DEP E ++P + + + +Y ++NF+ + RP + G +
Sbjct: 125 YGIKDEPNVTEDFSLEPLTDYSKFKADCEKILNEYQTDNFTT-VTIRPATVCGYSPRQRL 183
Query: 243 E---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSD 298
+ + KR + + G NI H+ D+ + + + P E + I+N
Sbjct: 184 DVVVNILTNLAYHKREISVFGGAQLRPNI-HIDDMVDVYLVLLRAPKEKIAGEIYN-AGY 241
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHY---DPKAAGIDAKKAFPFRNMHFYAEPRAAKDILG 355
T+ +A + + G V++V D ++ I + K + + LG
Sbjct: 242 LNFTVSEIANMVKEVVGEDVKLVTTPTNDNRSYHISSDKIY---------------NQLG 286
Query: 356 WRSTTNLP---EDLKERFE 371
+R+ ++ EDLK+ F+
Sbjct: 287 FRANRSIKLAVEDLKKAFD 305
>gi|448725788|ref|ZP_21708226.1| NAD-dependent epimerase/dehydratase [Halococcus morrhuae DSM 1307]
gi|445797652|gb|EMA48114.1| NAD-dependent epimerase/dehydratase [Halococcus morrhuae DSM 1307]
Length = 324
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 134/334 (40%), Gaps = 42/334 (12%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + ELL SG+ VT+ G+ + PF E V G +T D
Sbjct: 7 GGTRFIGRHTVTELLDSGYAVTVFNRGNHDD------PFEERVEHVE-GDRTKRTDLERA 59
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
DVV+D + + VR + G +++ ISS Y ++E P EG+
Sbjct: 60 AER----DLDVVIDCVAYHPEEVRTAIEL---FGDSRYVVISSGAAYG-SEEIPKREGET 111
Query: 205 VKPDAGHVQ---------------VEKYISENFSNWA---SFRPQYMIGSGNNKDCEEWF 246
D Q +++ +S+ ++ A S RP + G + + +++
Sbjct: 112 ALHDCTAEQATDDSQETYGPRKAEIDRVVSDAAADGAEAMSVRPPVVYGPHDYTERFDYW 171
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
DR+ V +PG G ++ V D++ L + E E A +N+ R L
Sbjct: 172 LDRVDNHDRVLVPGDGDCLRHLVFVEDVARALRIVAE--EGAPGAAYNVGDRRLPILSEW 229
Query: 307 AKLCAQAAGLPVEIVHYDPKAAGI-DAK-KAFPFRNMHFYAEPRAAKDILGWRSTTNLPE 364
+L A A VEIV + + + D + FP + + LGW +T + E
Sbjct: 230 IELAADALDTEVEIVTANERELAVADLEPDEFPLYRSYPHVLDTHRLSALGWEATP-IEE 288
Query: 365 DLKERFEEYV---KIGRDKKAMQFEIDDKILESL 395
L +E+ + GR K E ++++L L
Sbjct: 289 ALARTIDEHRASDRTGR-KNGPDREAEERVLSVL 321
>gi|54025750|ref|YP_119992.1| UDP-galactose 4-epimerase [Nocardia farcinica IFM 10152]
gi|54017258|dbj|BAD58628.1| putative UDP-galactose 4-epimerase [Nocardia farcinica IFM 10152]
Length = 326
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 133/338 (39%), Gaps = 68/338 (20%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTI---MTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
+GG +G A LL GHEV + +T G N+D V AG + V GD
Sbjct: 6 TGGAGYVGGVCALVLLEQGHEVVVVDDLTTG--NADG------------VPAGARFVEGD 51
Query: 141 PAEVG-NVVGGVTFDVVLDNNGKNL---DAVRPVADW-------------AKSSGVKQFL 183
AEV ++ TFD VL ++L RP W + +G + +
Sbjct: 52 VAEVAPALLRAETFDGVLHFAAQSLVGESVERPEKYWHGNVVKTLELLEAMRHTGTGRLV 111
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIG 235
F S+A +Y ++ P E +P + + I +++A S R + G
Sbjct: 112 FSSTAAVYGEPEQVPITEDAPTRPTNPYGATKLAIDHAITSYAIAHGLAATSLRYFNVAG 171
Query: 236 S----GNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTL 280
+ G N+ E +++ + + + G+ G + H+RDL+ L
Sbjct: 172 AYGGLGENRVVETHLIPLVLQVALGHRESISVYGTDWPTPDGTAIRDYIHIRDLADAHLL 231
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRN 340
A+ + E S I+NL S ++ + C + GLP+ A DA +
Sbjct: 232 ALTSAEPGSHRIYNLGSGTGFSVREVISACERVTGLPI---------AAQDAPRRAGDPA 282
Query: 341 MHFYAEPRAAKDILGWR-STTNLPEDLKERFEEYVKIG 377
+ + RA + LGWR T L E + + +E +G
Sbjct: 283 VLIASSERAVAE-LGWRPQHTALDEIVADAWEFLRSLG 319
>gi|386857551|ref|YP_006261728.1| NAD dependent epimerase/dehydratase family [Deinococcus gobiensis
I-0]
gi|380001080|gb|AFD26270.1| NAD dependent epimerase/dehydratase family [Deinococcus gobiensis
I-0]
Length = 335
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 101/252 (40%), Gaps = 45/252 (17%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---- 140
GG +G ++ + + +GH VT++T G +++ + AG + + GD
Sbjct: 7 GGTRFVGRHIVEAFVAAGHRVTVLTRGQTDAE-------------LPAGVERLTGDRDEG 53
Query: 141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPA----- 194
PA + +G +D +D +G VR + A V Q++F+S+ +Y +P
Sbjct: 54 PAGLA-ALGARRWDACVDVSGYQPRQVR-ASTHALRDRVGQYVFVSTVSVYAEPGREVVR 111
Query: 195 ----------DEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS-FRPQYMIGSGNNKDCE 243
DE V GD P V E + F A+ RPQ + G +
Sbjct: 112 ETDPLLPPCPDEAAPVTGDTYGPL--KVACEALVEAAFPGAATILRPQIVAGPEDYTRRT 169
Query: 244 EWFFDRIVR----KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
++ +R R + PV PG G F + RDL+ L V A IFN+ R
Sbjct: 170 LYWPERAARAGAGETPVLAPGDGQDFVQVIDARDLAR---LTVRLTGARRPGIFNVAGPR 226
Query: 300 AVTLDGMAKLCA 311
D + L A
Sbjct: 227 LSWADFLGLLGA 238
>gi|418975584|ref|ZP_13523488.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK1074]
gi|383347567|gb|EID25545.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK1074]
Length = 326
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 137/350 (39%), Gaps = 75/350 (21%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEV-------------TIMTVGDENSDKMKKP 121
KKVL+ +G +G Y+ +EL SG++V TV D K+
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQSGYQVRAFGRNRKMGQSLETFTVAFFQGDLTKQE 57
Query: 122 PF----NRFNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ +V AG TVWG P E D N+ + V D +
Sbjct: 58 DLAQACQEMDMVVHAGALSTVWG-PWE--------------DFYQTNVLGTKYVLDACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P D+ E D + + + YI ++ F
Sbjct: 103 AGIQRLVYVSSPSIYAAPRDQLAIKESDAPQEN----NLNNYIRSKLASEKLFKDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 159 SIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAFPFRNMHF 343
P+ AS ++N+ + + + + G P+ P + I + F ++ +
Sbjct: 217 PQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPITYRKVPAPLISVIASSLEFLYQTLKL 275
Query: 344 YAEPRAAK------------DI------LGWRSTTNLPEDLKERFEEYVK 375
EP + DI LG+R ++ E +++ ++Y K
Sbjct: 276 KGEPALTRYTYYLLRYSQTLDISKAELDLGYRPQISISEGIEQYVQDYRK 325
>gi|448507278|ref|ZP_21614896.1| NAD-dependent epimerase/dehydratase [Halorubrum distributum JCM
9100]
gi|448523824|ref|ZP_21619011.1| NAD-dependent epimerase/dehydratase [Halorubrum distributum JCM
10118]
gi|445698647|gb|ELZ50687.1| NAD-dependent epimerase/dehydratase [Halorubrum distributum JCM
9100]
gi|445700897|gb|ELZ52888.1| NAD-dependent epimerase/dehydratase [Halorubrum distributum JCM
10118]
Length = 330
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 122/321 (38%), Gaps = 46/321 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDE-----NSDKMKKPPFNRFNEIVSAGGKTVWG 139
GG IG + +ELL +EV I G+ + D++ +R +E K
Sbjct: 9 GGTRFIGRHTVEELLAHDYEVAIFNRGNHENPFADDDRVTHVEGDRKDETALRAAKL--- 65
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH 199
+V V D V A AD V +++ISS Y A+E P
Sbjct: 66 ------SVEPDVVIDCVAYQPADVETATEIFAD------VDGYVYISSGSSYA-AEEIPK 112
Query: 200 VEGDVVKPDAGHVQVEKYISENFSNWAS------------------FRPQYMIGSGNNKD 241
EG+ Q E + N + RP + G + +
Sbjct: 113 REGETPLEPCTDEQAVDDDHETYGNRKAEGDRAVFAAAEAGVAAMAVRPCIVYGPHDYTE 172
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+++ DR++ V +PG G + A+V D++S L + E E ++ +N+ RA+
Sbjct: 173 RLDYWIDRVLTHDRVVVPGDGQNLWHRAYVEDVASALRVVAERGEPGTA--YNVGDRRAL 230
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS 358
TL + A AG+ E V A G++ +R + A D LGW S
Sbjct: 231 TLRETLETIADVAGVDCEFVTASDDALAAGGLEPDDFTLYREYPHLLDTCALAD-LGWES 289
Query: 359 TTNLPEDLKERFEEYVKIGRD 379
T + E + EE+ + RD
Sbjct: 290 TP-VDEAMARTVEEHRESDRD 309
>gi|322370967|ref|ZP_08045520.1| NAD-dependent epimerase/dehydratase [Haladaptatus paucihalophilus
DX253]
gi|320549402|gb|EFW91063.1| NAD-dependent epimerase/dehydratase [Haladaptatus paucihalophilus
DX253]
Length = 323
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 108/262 (41%), Gaps = 41/262 (15%)
Query: 86 GHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFN-----EIVSAGGKTVWGD 140
GH IG YL L+ +GHEV ++ G+ N P+ + E V +T +
Sbjct: 10 GH--IGTYLVPRLVRAGHEVVAVSRGERN-------PYQDDSAWTDVESVEIDRETA-EE 59
Query: 141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
E G + D V+D L++ + + V+ L + ++ P+D P
Sbjct: 60 RGEFGEEIAATNPDAVIDLICFELESAEALVASLRGE-VQHLLHCGTIWVHGPSDVVPTT 118
Query: 201 E---------GDVVKPDAGHVQVEKYI----SENFSNWASFRPQYMIGSG-------NNK 240
E G+ + A ++E Y+ N P +++G G N
Sbjct: 119 EDSPRTRRPLGEYGRKKA---EIEAYLLDEARRNDFPATVLHPGHIVGPGWEPVNPAGNF 175
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
D + F R+ R + V +P G++ + H D++ A+EN AA F++VS RA
Sbjct: 176 DTD--VFSRLARGKEVALPNFGLETVHHVHADDVAQGFQRALENWSAAVGESFHVVSPRA 233
Query: 301 VTLDGMAKLCAQAAGLPVEIVH 322
+TL G A+ A G ++ +
Sbjct: 234 LTLRGYAEAVAGWFGRDADLTY 255
>gi|448630383|ref|ZP_21673038.1| NAD-dependent epimerase/dehydratase [Haloarcula vallismortis ATCC
29715]
gi|445756306|gb|EMA07681.1| NAD-dependent epimerase/dehydratase [Haloarcula vallismortis ATCC
29715]
Length = 327
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 123/313 (39%), Gaps = 54/313 (17%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
+ VL++ GG IG + E +G++VTI+T G R N
Sbjct: 2 ESVLVI----GGGRFIGRHTVTEFRDAGYDVTILTRG------------QRSNPFADTDV 45
Query: 135 KTVWGDPAE---VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
V GD E + V DVV+D D VR D + V +++ISS Y
Sbjct: 46 AHVEGDRRERVTLETARDQVEPDVVVDCVAYFPDDVRVATD--VFADVDAYVYISSGAAY 103
Query: 192 KPADEPPHVEGDVVKPDAGHV-------QVEKY-------------ISENFSNWASFRPQ 231
A+ P E + P AG E Y +E+ S RP
Sbjct: 104 G-AERTPKREAET--PLAGCTAEQATTDSAETYGPRKAEGDREVFAAAEDGVRAMSVRPT 160
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G + + ++ DR+V V +P G+ +A+V D++S L L E A +
Sbjct: 161 VVYGPHDYTERFAYWVDRVVEHEQVVVPSDGLSLWQMAYVEDVASALRLVAERGTAGEA- 219
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFP-FRNM-HFYAE 346
+N+ + A TL L A+ VE + + AAG+ A FP +R+ H +
Sbjct: 220 -YNVGDEHAPTLREWVDLLARVHDTSVEAIGVGERELAAAGL-APDDFPIYRDSPHLLST 277
Query: 347 PRAAKDILGWRST 359
R LGW ST
Sbjct: 278 ARLRD--LGWSST 288
>gi|401683872|ref|ZP_10815757.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus sp. BS35b]
gi|400186912|gb|EJO21117.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus sp. BS35b]
Length = 326
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 137/350 (39%), Gaps = 75/350 (21%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-------------TVGDENSDKMKKP 121
KKVL+ +G +G Y+ +EL SG++V TV D K+
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQSGYQVRAFGRNRKMGQSLETSTVAFFQGDLTKQE 57
Query: 122 PF----NRFNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ +V AG TVWG P E D N+ + V D +
Sbjct: 58 DLAQACQEMDMVVHAGALSTVWG-PWE--------------DFYQTNVLGTKYVLDACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P D+ E D + + + YI ++ F
Sbjct: 103 AGIQRLVYVSSPSIYAAPRDQLAIKESDAPQEN----NLNNYIRSKLASEKLFKDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 159 SIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAFPFRNMHF 343
P+ AS ++N+ + + + + G P+ P + I + F ++ +
Sbjct: 217 PQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPITYRKVPAPLISVIASSLEFLYQTLKL 275
Query: 344 YAEPRAAK------------DI------LGWRSTTNLPEDLKERFEEYVK 375
EP + DI LG+R ++ E +++ ++Y K
Sbjct: 276 KGEPALTRYTYYLLRYSQTLDISKAELDLGYRPQISISEGIEQYVQDYRK 325
>gi|448473282|ref|ZP_21601424.1| NAD-dependent epimerase/dehydratase [Halorubrum aidingense JCM
13560]
gi|445818794|gb|EMA68643.1| NAD-dependent epimerase/dehydratase [Halorubrum aidingense JCM
13560]
Length = 330
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 116/294 (39%), Gaps = 31/294 (10%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + ELL + +EV ++ G+ + PF + + G D +
Sbjct: 9 GGTRFIGRHTVSELLANDYEVAMVNRGNHEN------PFAANDRVTHVAGDRT--DRQTL 60
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY------KPADEPP 198
V DVV+D + V D + V +++ISS Y K DE P
Sbjct: 61 RAAKRSVDPDVVIDCVAYHPADVEAATD--VFADVDGYVYISSGSSYGAEEIPKREDETP 118
Query: 199 ------HVEGDVVKPDAGHVQVEK-----YISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
D + G+ + E +E N + RP + G + + +++
Sbjct: 119 LCGCTPEQATDDSQDTYGNRKAEGDRAVFAAAEAGVNAVAVRPCIVYGPHDYTERLDYWI 178
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
DR++ V +PG G A+V D++S L +A E E ++ +N+ RA+TL
Sbjct: 179 DRVLSYDRVVVPGDGQNVWQRAYVEDVASALRIAAERGEPGAA--YNVGDRRALTLAETV 236
Query: 308 KLCAQAAGLPVEIV--HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRST 359
+ A AA E+V D AAG F + + A LGW ST
Sbjct: 237 ETIADAADTDCEVVPASADALAAGDLTPDEFVLYREYPHLLDTCALADLGWEST 290
>gi|342218639|ref|ZP_08711249.1| NAD dependent epimerase/dehydratase family protein [Megasphaera sp.
UPII 135-E]
gi|341589509|gb|EGS32784.1| NAD dependent epimerase/dehydratase family protein [Megasphaera sp.
UPII 135-E]
Length = 309
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 139/326 (42%), Gaps = 53/326 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG ++ L+ +GH++T+ V + ++ ++ P E V D A+
Sbjct: 6 TGGAGFIGSHIGDALIMAGHQITV--VDNLSTGSLQNVP----KEAVFYEADI--RDIAQ 57
Query: 144 VGNVVGGVTFDVV----------------LDNNGKNLDAVRPVADWAKSSGVKQFLFISS 187
+ + FDVV L++ N+ + V D ++ +K+F+F SS
Sbjct: 58 METIFAQGKFDVVFHEAAQTMVPYSLEHPLEDADLNIIGLIKVLDLCRTYHIKKFIFSSS 117
Query: 188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS--FRPQYMI----------- 234
A +Y + P E + V+P + + + K +E + +R Y+I
Sbjct: 118 AAVYGDNQQLPLQETEPVEPTSFY-GLTKATAEAYIQMYHRLYRLPYVILRYANVYGERQ 176
Query: 235 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
GS F +R+V ++ + I G G Q + +V+D++ A+E+ A S I+N
Sbjct: 177 GSNGEGGVVYIFANRLVHQQALTIFGDGTQTRDFIYVKDVAQANVAALES--AIRSGIYN 234
Query: 295 LVSDRAVTLDGMA-KLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI 353
+ + + T++ + +L + A P + Y +G + R R K+
Sbjct: 235 VSTAKETTIEEIKNQLVSFATYQPT--IRYQAVRSGDIYRSVLDNR--------RTIKE- 283
Query: 354 LGWRSTTNLPEDLKERFEEYVKIGRD 379
L W+ +L L++ + Y K+G +
Sbjct: 284 LKWKPQVDLRTGLQQTY-AYFKMGEE 308
>gi|418697041|ref|ZP_13258042.1| NADH(P)-binding protein, PF13460 family [Leptospira kirschneri str.
H1]
gi|409955208|gb|EKO14148.1| NADH(P)-binding protein, PF13460 family [Leptospira kirschneri str.
H1]
Length = 330
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 133/319 (41%), Gaps = 55/319 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-----------FNRFNEIVSA 132
+GG +G L LL G++VT++ + D +K+ P N N+ +
Sbjct: 11 TGGAGYVGAMLVPRLLSEGYKVTVLDLMIYGEDVLKEHPNLTKIQGDIRDQNVLNQTIPG 70
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGK--NLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ + + +F++ N GK NLDA RP+ + +K VK+F++ SS+ +
Sbjct: 71 HDSVI-----HLACISNDPSFELN-PNLGKSINLDAFRPLVEISKKHSVKRFIYASSSSV 124
Query: 191 YKPADEPPHVEG-------DVVKPDAGHVQV-EKYISENFSNWASFRPQYMIGSGNNKDC 242
Y DEP E D K AG ++ +Y +++F+ + RP + G +
Sbjct: 125 YGIKDEPNVTEDFSLEPLTDYSKFKAGCEKILNEYQTDDFTTI-TIRPATVCGYSPRQRL 183
Query: 243 E---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSD 298
+ + KR + + G NI H+ D+ + + P E + IFN
Sbjct: 184 DVVVNILTNLAYHKREISVFGGAQLRPNI-HIDDMVDAYLVLLRAPKEKVAGEIFN-AGY 241
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHY---DPKAAGIDAKKAFPFRNMHFYAEPRAAKDILG 355
T+ +A + + G V++V D ++ I + K F + LG
Sbjct: 242 LNFTVSEIANMVKEVVGEDVKLVTTPTNDNRSYHISSDKIF---------------NKLG 286
Query: 356 WRSTTNLP---EDLKERFE 371
+R+ ++ EDLK+ F+
Sbjct: 287 FRANRSIKLAAEDLKKAFD 305
>gi|310825061|ref|YP_003957419.1| NAD dependent epimerase/dehydratase family protein [Stigmatella
aurantiaca DW4/3-1]
gi|309398133|gb|ADO75592.1| NAD dependent epimerase/dehydratase family [Stigmatella aurantiaca
DW4/3-1]
Length = 379
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 120/295 (40%), Gaps = 39/295 (13%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
KKK+LI+ GG A +G L + L GH +T+ N K + F + ++
Sbjct: 37 KKKILIL----GGTAFLGPALVERALSRGHTLTLF-----NRGKTRPGLFPQVEKLQ--- 84
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
GD + G +D V+D +G V+ A+ + V +LF+SS +Y
Sbjct: 85 -----GDRDGKLQALEGRQWDAVIDTSGYVPRVVKASAE-LLAPNVGHYLFVSSISVYGD 138
Query: 194 A-------DEPPHVEGDVVKPD-AGHVQVEKYISENFSNWA------SFRPQYMIGSGNN 239
D P D D + H K + E + A + RP ++G +
Sbjct: 139 TSKGGIGEDSPVATVADETTEDVSQHYGALKALCEKAAEAALPGRVSNVRPGLIVGPDDP 198
Query: 240 KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD- 298
D ++ R+ + V PG G VRDL++ L VE+ + +FN
Sbjct: 199 TDRFTYWPVRVAQGGEVLAPGDGEDPVQFIDVRDLAAFLIGLVEH---QAMGVFNATGPA 255
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI 353
+++ G+ + C A G + ++A+K P+ +M + PRA+ D+
Sbjct: 256 ETLSMRGLLETCKAAHGSNATFTWA--ASPFLEAQKVSPWSDMPVWI-PRASTDM 307
>gi|444917387|ref|ZP_21237488.1| UDP-glucose 4-epimerase [Cystobacter fuscus DSM 2262]
gi|444711141|gb|ELW52094.1| UDP-glucose 4-epimerase [Cystobacter fuscus DSM 2262]
Length = 308
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 26/209 (12%)
Query: 172 DWAKSSGVKQFLFISSAG-IYKPADEPPHVEGDVVKP--------DAGHVQVEKYISENF 222
+ ++ +GV++ +F S+ G IY D P E +P AG + + Y ++
Sbjct: 101 EASRVAGVQKVVFSSTGGAIYGEQDVFPAPESHATRPISPYGVSKAAGELYLNYYKAQYG 160
Query: 223 SNWASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 278
+ + R + G N E F R++ + I G G Q + +V D++
Sbjct: 161 LKYVALRYANVYGPRQNPHGEAGVVSIFSTRLLAGQDCTIYGEGKQTRDFVYVEDVARAN 220
Query: 279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 338
LA E + NI V ++ + L AQAAG PKAAG + P
Sbjct: 221 LLAAEKDYSGPINIGTGVE---TDINRLFSLLAQAAG--------SPKAAGHAPGR--PG 267
Query: 339 RNMHFYAEPRAAKDILGWRSTTNLPEDLK 367
M + R A+++LGW+ T +L E +
Sbjct: 268 EQMRSCVDNRLAREVLGWQPTVDLAEGTR 296
>gi|398339519|ref|ZP_10524222.1| UDP-glucose 4-epimerase [Leptospira kirschneri serovar Bim str.
1051]
gi|418678763|ref|ZP_13240037.1| NADH(P)-binding protein, PF13460 family [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|418687825|ref|ZP_13248984.1| NADH(P)-binding protein, PF13460 family [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|418742328|ref|ZP_13298701.1| NADH(P)-binding protein, PF13460 family [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
gi|400321953|gb|EJO69813.1| NADH(P)-binding protein, PF13460 family [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|410738149|gb|EKQ82888.1| NADH(P)-binding protein, PF13460 family [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|410750686|gb|EKR07666.1| NADH(P)-binding protein, PF13460 family [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
Length = 330
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 133/319 (41%), Gaps = 55/319 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-----------FNRFNEIVSA 132
+GG +G L LL G++VT++ + D +K+ P N N+ +
Sbjct: 11 TGGAGYVGAMLVPRLLSEGYKVTVLDLMIYGEDVLKEHPNLTKVKGDIRDQNLLNQTIPG 70
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGK--NLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ + + +F++ N GK NLDA RP+ + +K VK+F++ SS+ +
Sbjct: 71 HDSVI-----HLACISNDPSFELN-PNLGKSINLDAFRPLVEISKKHAVKRFIYASSSSV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQ--------VEKYISENFSNWASFRPQYMIGSGNNKDC 242
Y DEP E ++P + + + +Y ++NF+ + RP + G +
Sbjct: 125 YGIKDEPNVTEDFSLEPLTDYSKFKADCEKILNEYQTDNFTT-VTIRPATVCGYSPRQRL 183
Query: 243 E---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSD 298
+ + KR + + G NI H+ D+ + + P E + I+N
Sbjct: 184 DVVVNILTNLAYHKREISVFGGAQLRPNI-HIDDMVDAYLVLLRAPKEKIAGEIYN-AGY 241
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHY---DPKAAGIDAKKAFPFRNMHFYAEPRAAKDILG 355
T+ +A + + G V++V D ++ I + K + + LG
Sbjct: 242 LNFTVSEIANMVKEVVGEDVKLVTTPTNDNRSYHISSDKIY---------------NQLG 286
Query: 356 WRSTTNLP---EDLKERFE 371
+R+ ++ EDLK+ F+
Sbjct: 287 FRANRSIKLAAEDLKKAFD 305
>gi|455789103|gb|EMF41039.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Lora str. TE 1992]
Length = 330
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 133/319 (41%), Gaps = 55/319 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF-----------NRFNEIVSA 132
+GG +G L LL G++VT++ + D +K+ P N N+ +
Sbjct: 11 TGGAGYVGAMLVPRLLSEGYKVTVLDLMIYGEDVLKEHPNLTKVQGDIRDQNVLNQTIPG 70
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGK--NLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ + + +F++ N GK NLDA RP+ + +K VK+F++ SS+ +
Sbjct: 71 HDSVI-----HLACISNDPSFELN-PNLGKSINLDAFRPLVEISKKHSVKRFIYASSSSV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQ--------VEKYISENFSNWASFRPQYMIGSGNNKDC 242
Y DEP E ++P + + + +Y +++F+ + RP + G +
Sbjct: 125 YGIKDEPNVTEDFSLEPLTDYSKFKADCEKILNEYQTDDFTTI-TIRPATVCGYSPRQRL 183
Query: 243 E---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSD 298
+ + KR + + G NI H+ D+ + + P E + IFN
Sbjct: 184 DVVVNILTNLAYHKREISVFGGAQLRPNI-HIDDMVDAYLVLLRAPKEKVAGEIFN-AGY 241
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHY---DPKAAGIDAKKAFPFRNMHFYAEPRAAKDILG 355
T+ +A + + G V++V D ++ I + K F + LG
Sbjct: 242 LNFTVSEIANMVKEVVGEDVKLVTTPTNDNRSYHISSDKIF---------------NKLG 286
Query: 356 WRSTTNLP---EDLKERFE 371
+R+ ++ EDLK+ F+
Sbjct: 287 FRANRSIKLAAEDLKKAFD 305
>gi|24214283|ref|NP_711764.1| nucleoside-diphosphate-sugar epimerase [Leptospira interrogans
serovar Lai str. 56601]
gi|386073735|ref|YP_005988052.1| nucleoside-diphosphate-sugar epimerase [Leptospira interrogans
serovar Lai str. IPAV]
gi|417759523|ref|ZP_12407560.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
str. 2002000624]
gi|417777162|ref|ZP_12424987.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
str. 2002000621]
gi|418670781|ref|ZP_13232143.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
str. 2002000623]
gi|24195200|gb|AAN48782.1| nucleoside-diphosphate-sugar epimerase [Leptospira interrogans
serovar Lai str. 56601]
gi|353457524|gb|AER02069.1| nucleoside-diphosphate-sugar epimerase [Leptospira interrogans
serovar Lai str. IPAV]
gi|409944998|gb|EKN90578.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
str. 2002000624]
gi|410573039|gb|EKQ36096.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
str. 2002000621]
gi|410582210|gb|EKQ50009.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
str. 2002000623]
Length = 330
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 133/319 (41%), Gaps = 55/319 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-----------FNRFNEIVSA 132
+GG +G L LL G++VT++ + D +K+ P N N+ +
Sbjct: 11 TGGAGYVGAMLVPRLLSEGYKVTVLDLMIYGEDVLKEHPNLTKIQGDIRDQNVLNQTIPG 70
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGK--NLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ + + +F++ N GK NLDA RP+ + +K VK+F++ SS+ +
Sbjct: 71 HDSVI-----HLACISNDPSFELN-PNLGKSINLDAFRPLVEISKKHSVKRFIYASSSSV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQ--------VEKYISENFSNWASFRPQYMIGSGNNKDC 242
Y DEP E ++P + + + +Y +++F+ + RP + G +
Sbjct: 125 YGIKDEPNVTEDFSLEPLTDYSKFKADCEKILNEYQTDDFTTI-TIRPATVCGYSPRQRL 183
Query: 243 E---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSD 298
+ + KR + + G NI H+ D+ + + P E + IFN
Sbjct: 184 DVVVNILTNLAYHKREISVFGGAQLRPNI-HIDDMVDAYLVLLRAPKEKVAGEIFN-AGY 241
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHY---DPKAAGIDAKKAFPFRNMHFYAEPRAAKDILG 355
T+ +A + + G V++V D ++ I + K F + LG
Sbjct: 242 LNFTVSEIANMVKEVVGEDVKLVTTPTNDNRSYHISSDKIF---------------NKLG 286
Query: 356 WRSTTNLP---EDLKERFE 371
+R+ ++ EDLK+ F+
Sbjct: 287 FRANRSIKLAAEDLKKAFD 305
>gi|45658048|ref|YP_002134.1| UDP-glucose 4-epimerase [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|417764673|ref|ZP_12412640.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|417771687|ref|ZP_12419581.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Pomona str. Pomona]
gi|417782757|ref|ZP_12430481.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
str. C10069]
gi|418668897|ref|ZP_13230297.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|418682903|ref|ZP_13244116.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|418707979|ref|ZP_13268792.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|418722866|ref|ZP_13281840.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
str. UI 12621]
gi|418728700|ref|ZP_13287271.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
str. UI 12758]
gi|421086354|ref|ZP_15547205.1| NADH(P)-binding protein, PF13460 family [Leptospira santarosai str.
HAI1594]
gi|421101900|ref|ZP_15562511.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|421116398|ref|ZP_15576784.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|421127783|ref|ZP_15588004.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|421134247|ref|ZP_15594388.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|45601289|gb|AAS70771.1| UDP-glucose 4-epimerase [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|289450916|gb|ADC93833.1| UDP-glucose 4-epimerase [Leptospira interrogans serovar Canicola]
gi|289451009|gb|ADC93925.1| UDP-glucose 4-epimerase [Leptospira interrogans serovar Autumnalis]
gi|289451093|gb|ADC94008.1| UDP-glucose 4-epimerase [Leptospira interrogans serovar
Grippotyphosa]
gi|400325462|gb|EJO77738.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|400353117|gb|EJP05293.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|409946474|gb|EKN96484.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Pomona str. Pomona]
gi|409954172|gb|EKO08667.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
str. C10069]
gi|409963700|gb|EKO27423.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
str. UI 12621]
gi|410012098|gb|EKO70203.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|410021546|gb|EKO88330.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|410368573|gb|EKP23950.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|410431919|gb|EKP76279.1| NADH(P)-binding protein, PF13460 family [Leptospira santarosai str.
HAI1594]
gi|410434842|gb|EKP83977.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|410755629|gb|EKR17259.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|410771469|gb|EKR46670.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|410776552|gb|EKR56529.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
str. UI 12758]
gi|455670178|gb|EMF35207.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Pomona str. Fox 32256]
gi|456822404|gb|EMF70890.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Canicola str. LT1962]
gi|456972627|gb|EMG12978.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Grippotyphosa str. LT2186]
Length = 330
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 133/319 (41%), Gaps = 55/319 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-----------FNRFNEIVSA 132
+GG +G L LL G++VT++ + D +K+ P N N+ +
Sbjct: 11 TGGAGYVGAMLVPRLLSEGYKVTVLDLMIYGEDVLKEHPNLTKIQGDIRDQNVLNQTIPG 70
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGK--NLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ + + +F++ N GK NLDA RP+ + +K VK+F++ SS+ +
Sbjct: 71 HDSVI-----HLACISNDPSFELN-PNLGKSINLDAFRPLVEISKKHSVKRFIYASSSSV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQ--------VEKYISENFSNWASFRPQYMIGSGNNKDC 242
Y DEP E ++P + + + +Y +++F+ + RP + G +
Sbjct: 125 YGIKDEPNVTEDFSLEPLTDYSKFKADCEKILNEYQTDDFTTI-TIRPATVCGYSPRQRL 183
Query: 243 E---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSD 298
+ + KR + + G NI H+ D+ + + P E + IFN
Sbjct: 184 DVVVNILTNLAYHKREISVFGGAQLRPNI-HIDDMVDAYLVLLRAPKEKVAGEIFN-AGY 241
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHY---DPKAAGIDAKKAFPFRNMHFYAEPRAAKDILG 355
T+ +A + + G V++V D ++ I + K F + LG
Sbjct: 242 LNFTVSEIANMVKEVVGEDVKLVTTPTNDNRSYHISSDKIF---------------NKLG 286
Query: 356 WRSTTNLP---EDLKERFE 371
+R+ ++ EDLK+ F+
Sbjct: 287 FRANRSIKLAAEDLKKAFD 305
>gi|282936064|gb|ADB04289.1| putative sugar dehydratase [bacterium enrichment culture clone N47]
gi|308272789|emb|CBX29393.1| hypothetical protein N47_J03740 [uncultured Desulfobacterium sp.]
Length = 323
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 114/273 (41%), Gaps = 31/273 (11%)
Query: 132 AGGKTVWGDPAEVGNVVGGV---TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA 188
AG + + G+ +V GV + V+D G+ + + + ++ + +++IS+
Sbjct: 56 AGVREIVGNRHYEAQIVDGVPALDWHAVVDFCGEADEDIVKILEYLPGR-IFHYIYISTT 114
Query: 189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW-----------------ASFRPQ 231
IY+ P V D K A ++ Y F+ W RP
Sbjct: 115 SIYQNTRILP-VSEDAPKLSAPQPELGDYADYAFNKWLCELRLQIDCPKRGIAYTCLRPA 173
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G N E +FFD I +PV IP + + N +V DLS ++ + N A
Sbjct: 174 IIYGPYNYAPRETYFFDLIYHSKPVIIPRNDLPLFNFVYVVDLSKVIQKCLGN-HAVFDQ 232
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA---FPFRNMHFYAEPR 348
FN+ S++ ++ + ++ + + I + I+ ++ FP + Y+ +
Sbjct: 233 AFNVCSEQLISYQRLMEVFEEVCSKKISIEMLSVRE--IEKRQIPLPFPLDSHLIYSGTK 290
Query: 349 AAKDILGWRSTTNLPEDLKERFEEYVKIGRDKK 381
+ +LG+ S T + +K + EY K+ +D K
Sbjct: 291 LQR-LLGF-SYTPIENGMKSTY-EYYKLVQDAK 320
>gi|115373575|ref|ZP_01460871.1| isoflavone reductase [Stigmatella aurantiaca DW4/3-1]
gi|115369417|gb|EAU68356.1| isoflavone reductase [Stigmatella aurantiaca DW4/3-1]
Length = 359
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 120/295 (40%), Gaps = 39/295 (13%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
KKK+LI+ GG A +G L + L GH +T+ N K + F + ++
Sbjct: 17 KKKILIL----GGTAFLGPALVERALSRGHTLTLF-----NRGKTRPGLFPQVEKLQ--- 64
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
GD + G +D V+D +G V+ A+ + V +LF+SS +Y
Sbjct: 65 -----GDRDGKLQALEGRQWDAVIDTSGYVPRVVKASAELL-APNVGHYLFVSSISVYGD 118
Query: 194 A-------DEPPHVEGDVVKPD-AGHVQVEKYISENFSNWA------SFRPQYMIGSGNN 239
D P D D + H K + E + A + RP ++G +
Sbjct: 119 TSKGGIGEDSPVATVADETTEDVSQHYGALKALCEKAAEAALPGRVSNVRPGLIVGPDDP 178
Query: 240 KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD- 298
D ++ R+ + V PG G VRDL++ L VE+ + +FN
Sbjct: 179 TDRFTYWPVRVAQGGEVLAPGDGEDPVQFIDVRDLAAFLIGLVEH---QAMGVFNATGPA 235
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI 353
+++ G+ + C A G + ++A+K P+ +M + PRA+ D+
Sbjct: 236 ETLSMRGLLETCKAAHGSNATFTWA--ASPFLEAQKVSPWSDMPVWI-PRASTDM 287
>gi|448432407|ref|ZP_21585543.1| NAD-dependent epimerase/dehydratase [Halorubrum tebenquichense DSM
14210]
gi|445687291|gb|ELZ39583.1| NAD-dependent epimerase/dehydratase [Halorubrum tebenquichense DSM
14210]
Length = 330
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 124/319 (38%), Gaps = 42/319 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + ELL +EV I G + PF + + G D +
Sbjct: 9 GGTRFIGRHTVDELLAHDYEVAIFNRG------THENPFAADDRVTHVEGDR--KDDTAL 60
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHVE 201
V DVV+D A +P A + + V +++ISS Y A+E P E
Sbjct: 61 RAAKLSVEPDVVIDCV-----AYQPADVEAATEIFADVDGYVYISSGSSYA-AEEIPKRE 114
Query: 202 GDVVKPDAGHVQVEKYISENFSNWAS------------------FRPQYMIGSGNNKDCE 243
G+ Q E + N + RP + G + +
Sbjct: 115 GETPLEPCTDEQATDDSHETYGNRKAEGDRAVFAAAEEGVAAMAVRPCIVYGPHDYTERL 174
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
+++ DR++ + +PG G + A+V D++S L + E E ++ +N+ RA+TL
Sbjct: 175 DYWIDRVLTHDRLVVPGDGQNLWHRAYVEDVASALRIVAERGEPGAA--YNVGDRRALTL 232
Query: 304 DGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 360
+ A AA + EIV A G++ +R + A D LGW ST
Sbjct: 233 RETLETVADAAEVDCEIVAASDDALAAGGLEPDDFTLYREYPHLLDTCALAD-LGWESTP 291
Query: 361 NLPEDLKERFEEYVKIGRD 379
+ E ++ EE+ RD
Sbjct: 292 -VDEAMERTVEEHRASDRD 309
>gi|374595736|ref|ZP_09668740.1| NAD-dependent epimerase/dehydratase [Gillisia limnaea DSM 15749]
gi|373870375|gb|EHQ02373.1| NAD-dependent epimerase/dehydratase [Gillisia limnaea DSM 15749]
Length = 316
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 108/254 (42%), Gaps = 50/254 (19%)
Query: 162 KNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPD 208
+NL + D A + V++F+F+ S+ IY K A +P P E +
Sbjct: 83 ENLQIQNNLIDTAHKAEVEKFIFLGSSCIYPKLAPQPLKEEYLLTDSLEPTNEWYAIAKI 142
Query: 209 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPI 258
AG E + ++ S P + GS +N D E ++RK PV +
Sbjct: 143 AGVKACEAIRKQFGKDFVSLMPTNLYGSRDNFDLETSHVLPAMIRKFQDAKVNGNVPVEL 202
Query: 259 PGSGMQFTNIAHVRDLSSMLTLAVEN--PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL 316
GSG HV D++ + A+EN PE +++N+ + + +T+ +A+ + G
Sbjct: 203 WGSGTPMREFLHVDDMADAVVFALENKLPE----HLYNIGTGKDLTIKELAETIQEITGH 258
Query: 317 PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFE 371
EI+ + K G PR D+ GW++TTNL + +++ ++
Sbjct: 259 NGEIIWDNSKPDGT----------------PRKLMDVSKMKSAGWQATTNLEDGIQKTYK 302
Query: 372 EYVKIGRDKKAMQF 385
+++ + K ++
Sbjct: 303 WFLQNSENYKQVKL 316
>gi|374985940|ref|YP_004961435.1| putative reductase [Streptomyces bingchenggensis BCW-1]
gi|297156592|gb|ADI06304.1| putative reductase [Streptomyces bingchenggensis BCW-1]
Length = 334
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 108/276 (39%), Gaps = 45/276 (16%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G +A+E L +VT F+R G + GD + V
Sbjct: 7 GGTEFVGRAIAEEALARDWQVTA---------------FHRGRHDPPPGVAALRGDRSAV 51
Query: 145 GNVV-----GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK---PA-- 194
G + G +DVV+D AVR VA + Q+++ISS +Y PA
Sbjct: 52 GGLAALEAPGAGEWDVVVDTWSGAPSAVRDVAR-LLAGRAGQYVYISSRSVYAYPAPAGL 110
Query: 195 -DEPPHVEGDVVKPDAGHVQ-VEKYISENFSNWASF-------RPQYMIGSGNNKDCEEW 245
++ P VEG PDAG V+ + + A+F R ++G N W
Sbjct: 111 DEDGPLVEG---SPDAGEVEYAQAKRGGELAAQAAFGERALLARAGLILGPYENVGRLPW 167
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA-VTLD 304
+ RI + PV PG VRDL+ + A E +NLVS T
Sbjct: 168 WLTRISQGGPVLAPGPRELALQYIDVRDLAGWVLDAAER---GLGGPYNLVSPPGQATFG 224
Query: 305 GMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFP 337
+ + CA G E+ DP+ AAG++ P
Sbjct: 225 ELLEACAAVTGSDAELRWTDPEAVLAAGVEPWTELP 260
>gi|226357403|ref|YP_002787143.1| NAD dependent epimerase/dehydratase [Deinococcus deserti VCD115]
gi|226319393|gb|ACO47389.1| putative NAD dependent epimerase/dehydratase [Deinococcus deserti
VCD115]
Length = 322
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 98/233 (42%), Gaps = 35/233 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G ++ + L +GH+V+I+T G +++D++ A + + GD +
Sbjct: 7 GGTQFVGRHIVEAFLAAGHKVSILTRG-KSADELP------------AQVERLQGDRNQG 53
Query: 145 GNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE 201
+ +T +D +D +G VR A+ + + Q++FIS+ +Y P E
Sbjct: 54 PQGLLALTDRQWDACVDVSGYTPGQVRASAELLRDR-ISQYVFISTVSVYAEPGRHPVRE 112
Query: 202 GDVVKPDAGH--------------VQVEKYISENFS-NWASFRPQYMIGSGNNKDCEEWF 246
D + P A V E+ + + ++ N A RPQ + G ++ ++
Sbjct: 113 DDPLMPPAAEDVTEVTGETYGPLKVACERIVQDVYAENCAILRPQIVAGPYDHTARYPYW 172
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
DR R + PG G + RD + V+ E S +FNL R
Sbjct: 173 VDRASRGGEMLAPGDGSDHVQVIDARDQAR---FTVKVAEEKISGVFNLAGPR 222
>gi|410665775|ref|YP_006918146.1| NAD dependent epimerase/dehydratase [Simiduia agarivorans SA1 = DSM
21679]
gi|409028132|gb|AFV00417.1| NAD dependent epimerase/dehydratase [Simiduia agarivorans SA1 = DSM
21679]
Length = 332
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 95/239 (39%), Gaps = 18/239 (7%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK-MKKPPFN----RFNEIVSAGGKTV- 137
+GG +G ++ L GH+VT + + + + P N + GK +
Sbjct: 6 TGGTGFVGRHIVWRLSAEGHQVTFTGRNERAAQQVLAHSPGNVTWLAIDHASPEAGKQIH 65
Query: 138 ---WGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KP 193
G A V + D N+++ V +S GV++ + IS+ +Y +
Sbjct: 66 QASQGHQAVVHTAGLSSPWGRYHDFYSANVESTEQVVSACESQGVQRLIHISTPSLYFRF 125
Query: 194 ADEPPHVEGDVVKPDAGHVQVEKYISE------NFSNWASFRPQYMIGSGNNKDCEEWFF 247
AD E V+ P H K ++E N FRP+ + G +N
Sbjct: 126 ADCLNIDEDSVLPPPVNHYAATKALAEARIRESRIPNTVLFRPRAIFGPWDNTLMPRLL- 184
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
R++ K VP P G ++ ++ +L + LA+ P A S +NL + + + + +
Sbjct: 185 -RVIEKSAVPTPRQGRALVDLTYIDNLVDAVLLALHQPLPARSVTYNLSNGQPICISDL 242
>gi|398344916|ref|ZP_10529619.1| UDP-glucose 4-epimerase [Leptospira inadai serovar Lyme str. 10]
Length = 308
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 119/262 (45%), Gaps = 37/262 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTI-----MTVGDENS-DKMKKPPFNRFNEIVSAGGKTV 137
+G + +G LA L G + I + GD N D++ + + IV GG+
Sbjct: 6 TGSNGFVGSRLAPLLKSQGIQTVIVSSNRLATGDTNELDELLSKHSGQIDAIVHLGGR-- 63
Query: 138 WGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA---GIYKPA 194
+VV D L N++ + +A++A +++F++ISS G PA
Sbjct: 64 -------AHVVHDKEDDPKLAFFKANVETTKLLAEFAIRCKIRKFIYISSVKALGERSPA 116
Query: 195 DEPPHVEGDVVKP--DAGHVQVE-----KYI-SENFSNWASFRPQYMIGSG--NNKDCEE 244
D P +E D +P D G ++E +YI S+ + RP ++G+G N D
Sbjct: 117 DRPLTIE-DEPEPEDDYGGTKLEAENTLRYICSKELLQYTILRPPLIVGAGAKGNLDRLT 175
Query: 245 WFFDRIVRKRPVPIPGSGMQFT-NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
W K+ +P+P +G++ ++ VR+ + ++ EA++ N LVSD +++
Sbjct: 176 WLV-----KKGIPLPFAGIKNKRSLVGVRNFCDAILFSLT--EASTDNRVFLVSDSSLST 228
Query: 304 DGMAKLCAQAAGLPVEIVHYDP 325
+ + ++A + + ++ P
Sbjct: 229 PELFRAFSRALCVRDSLFYFPP 250
>gi|119493460|ref|ZP_01624129.1| oxidoreductase [Lyngbya sp. PCC 8106]
gi|119452704|gb|EAW33883.1| oxidoreductase [Lyngbya sp. PCC 8106]
Length = 343
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 101/226 (44%), Gaps = 33/226 (14%)
Query: 175 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFS-----NW 225
K K+F+ +S+ G++ ++PP E +KP V+ E +I +F+ ++
Sbjct: 113 KEPNFKRFVHVSTIGVHGHIEQPPADETYRMKPGDIYQETKVEAELWI-RDFAPKAGLSF 171
Query: 226 ASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
A RP + G G+ + + + ++V K+ VP+ G G + HV DL++ + A +P
Sbjct: 172 AVVRPAGIYGPGDKRLLKIF---QMVNKKWVPVIGDGSNLYHFIHVDDLTNFMICAATHP 228
Query: 286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF------- 338
+ A + +F S A+T + M + G+ + + P A F
Sbjct: 229 K-AEAEVFICGSPEAMTFEKMISIIGDVYGVKAQFLRL-PAAPLFALGYVFEILCKPLGI 286
Query: 339 ------RNMHFYAEPRA-----AKDILGWRSTTNLPEDLKERFEEY 373
R + FY + R+ ++ILG+ +T + + +KE + Y
Sbjct: 287 QPPIYRRRVAFYTKDRSFNTSKMRNILGFNTTHSDLDGIKETAQWY 332
>gi|300781371|ref|ZP_07091225.1| UDP-glucose 4-epimerase [Corynebacterium genitalium ATCC 33030]
gi|300533078|gb|EFK54139.1| UDP-glucose 4-epimerase [Corynebacterium genitalium ATCC 33030]
Length = 309
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 130/323 (40%), Gaps = 52/323 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG-GKTVWGD-- 140
+GG IG +L +L+ +GHEV ++ + +S +++ E+V G D
Sbjct: 6 TGGAGFIGSHLVDQLVMAGHEVAVLD--NLSSGRLENISHQTAVELVEGDVGDKGLADVV 63
Query: 141 ----PAEVGNVVGGVTF-----DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG-I 190
P + ++ + D +LD L + VA+ A+ +GV++ + SS G I
Sbjct: 64 DKLAPEVIFHLAAQIDVRKSVEDPILDAQANILGTIN-VAEAARKAGVRKIVHTSSGGSI 122
Query: 191 YKPADEPPHVEGDVVKPD----AGHVQVEKYIS---ENFSNWASF-RPQYMIGSGNNKDC 242
Y E P E V P A + E+Y+ + ASF P + G N
Sbjct: 123 YGTPSEFPVDESFPVDPHSPYAASKLAGEQYLGIYRHLYGMQASFIAPANVYGPRQNPHG 182
Query: 243 EEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
E F + ++ RP I G G + +V D++ LA E FN+ +
Sbjct: 183 EAGVVAIFSENLLHGRPTKIFGGGTNTRDYVYVGDVARAFVLAAG--ERGDGVRFNIGTS 240
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAA------KD 352
T + L A+ AG P DA + FP R PR+A K+
Sbjct: 241 VETTDRELHTLVAKHAGAP-------------DAPQNFPPR---LGDVPRSALSAARAKE 284
Query: 353 ILGWRSTTNLPEDLKERFEEYVK 375
ILGW T +L E + +++ +
Sbjct: 285 ILGWEPTVSLDEGVARTVDDFRR 307
>gi|121534554|ref|ZP_01666376.1| NAD-dependent epimerase/dehydratase [Thermosinus carboxydivorans
Nor1]
gi|121306806|gb|EAX47726.1| NAD-dependent epimerase/dehydratase [Thermosinus carboxydivorans
Nor1]
Length = 306
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 26/217 (11%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGH----VQVEKY 217
N+ + V + +SSGVK+ +F SSA +Y PAD P E D +P + + + EKY
Sbjct: 92 NIMGLVNVLEACRSSGVKRIVFASSAAVYGDPADLPLSEEAD-KQPTSFYGLSKLVAEKY 150
Query: 218 ISENFSN----WASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIA 269
+ + N + + R + G E F + + P+ + G G Q +
Sbjct: 151 LELYYKNFGLEYVALRYANVYGERQTDSGEGGVISIFLTKALVDEPLTVFGDGTQTRDFI 210
Query: 270 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
+VRD++ A+ A S +N+ + + ++++ + L Q P+ I Y P AG
Sbjct: 211 YVRDVAEANYRALFTANANRS--YNISTGQEISVNELIGLMQQLVEKPL-ITQYAPPRAG 267
Query: 330 IDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDL 366
+ AA+ +LGW+ +L E L
Sbjct: 268 DIYRSVL---------NNAAARAMLGWQPNYSLAEGL 295
>gi|448465715|ref|ZP_21598907.1| NAD-dependent epimerase/dehydratase [Halorubrum kocurii JCM 14978]
gi|445814901|gb|EMA64852.1| NAD-dependent epimerase/dehydratase [Halorubrum kocurii JCM 14978]
Length = 339
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 100/242 (41%), Gaps = 28/242 (11%)
Query: 96 KELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDV 155
+ L+G GH+VT +T G+ ++D F + D A + + V FD
Sbjct: 18 RGLVGDGHDVTCLTRGETDADVPSTVSFRSADRT----------DRAALTDAVADEAFDC 67
Query: 156 VLDNNGKNLDAVR-PVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQ 213
V+D + + R VA +A + Q++F S+ +Y +P + P E +P
Sbjct: 68 VIDMVCFDAETARDAVAVFADRT--DQYVFCSTVDVYHRPPERNPVREDASREPPVSEYA 125
Query: 214 VEKYISENFSNWAS--------FRPQYMIGSG----NNKDCEEWFFDRIVRKRPVPIPGS 261
K +E+ A RP G G + ++ DR+ + +P+ + G
Sbjct: 126 AGKAAAEDVFRAAHGDAFATTIVRPWSTYGEGGPVLHTLGTGTYYVDRVRKGKPILVHGD 185
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EI 320
G H D++ AV NP+ A +++ S+ +T + + A+A P E+
Sbjct: 186 GTSLWGPCHRDDVARAFVNAVGNPD-AFGEAYHVTSEETMTWNQYHRRVARALDAPEPEL 244
Query: 321 VH 322
VH
Sbjct: 245 VH 246
>gi|398935330|ref|ZP_10666418.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM41(2012)]
gi|398169816|gb|EJM57786.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM41(2012)]
Length = 309
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 111/279 (39%), Gaps = 45/279 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG +L LL GH V I+ D ++ K P + + G + + GD A+
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILD--DLSTGKRSNLPLD------NPGVELIVGDVAD 60
Query: 144 VGNVVGGV-----------------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
V + + D + + N V + + +GVK+ L+ S
Sbjct: 61 AALVAQAMVGCSAVAHLAAVASVQASVDDPVKTHQSNFIGSLNVCEAMRQTGVKRVLYAS 120
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------G 237
SA +Y E ++ D K +K SE++ ++ +R Q+ + G
Sbjct: 121 SAAVYGNNGEGESIDEDTPKAPLTPYASDKLASEHYFDF--YRRQHGLEPVIFRFFNIFG 178
Query: 238 NNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
+D F +R + P+ + G G Q + +V DL +L A+E P+
Sbjct: 179 PRQDPSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFVYVEDLVDLLVQAIEKPQVEVG 238
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
+ N+ ++A TL M + G P+ V Y P +G
Sbjct: 239 AV-NVGWNQATTLKQMLEALEAVVG-PLPPVSYGPARSG 275
>gi|238062666|ref|ZP_04607375.1| NDP-glucose 4-epimerase [Micromonospora sp. ATCC 39149]
gi|237884477|gb|EEP73305.1| NDP-glucose 4-epimerase [Micromonospora sp. ATCC 39149]
Length = 342
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 104/267 (38%), Gaps = 47/267 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM-----------------TVGDENSDKMKKPPF--N 124
+GG IG +L + L+ +GH VT++ VG F N
Sbjct: 7 TGGAGFIGSHLVESLVRNGHRVTVLDDLSGGSRQRVPAGVDLAVGSVTDVDFVDSLFAEN 66
Query: 125 RFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
RF + ++ V N G N+ + + + +GV+ F F
Sbjct: 67 RFERVFHFAAFAA-----------EAISHSVKQLNYGTNVMGSINLINASLRTGVRFFCF 115
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN---------WASFRPQYMIG 235
SS +Y + P + VV A + KY+ E + +FR + G
Sbjct: 116 ASSVAVYGHGETP--MRESVVPVPADSYGLAKYLVERELEVTMRTQGLPFTAFRMHNVYG 173
Query: 236 SGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
N ++ FF++I+R P+ + G G Q +V D+ ++++ A E EAA
Sbjct: 174 EWQNMRDPYRNAVAIFFNQILRGEPITVYGDGGQVRAFTYVGDVVNVVSRAAET-EAAWG 232
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLP 317
FN+ S T+ +A+ AAG+P
Sbjct: 233 RAFNVGSSSTNTVLELAQAVRSAAGVP 259
>gi|392383819|ref|YP_005033015.1| putative NAD-dependent epimerase/dehydratasen; putative UDP-glucose
4-epimerase [Azospirillum brasilense Sp245]
gi|356880534|emb|CCD01496.1| putative NAD-dependent epimerase/dehydratasen; putative UDP-glucose
4-epimerase [Azospirillum brasilense Sp245]
Length = 335
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 117/323 (36%), Gaps = 60/323 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--- 140
+GG IG ++ L+ GH VT++ D S ++ V A + + GD
Sbjct: 6 TGGAGFIGSHITHRLVSLGHRVTVI---DNESTGLRSN--------VPAEVRYIRGDVTN 54
Query: 141 -----------PAEVGNVVGGVT----FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
P V ++ G V+ F + + N++ V GVK+ ++
Sbjct: 55 PADLDKAFEEVPDAVIHIAGQVSIIRAFSNPVGDLRTNVEGTVNVLQQCVERGVKRLIYA 114
Query: 186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQY------------- 232
SS Y A+ P E P + V KY E + + + RP
Sbjct: 115 SSMSAYGNAEVVPTPEDTPCSP-VSYYGVTKYAGERYVHLTAARPDLPGALAVTSFRMYN 173
Query: 233 MIGSGNNKD-----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
+ G D F I+R P+ I G G Q + + D+ A++NP A
Sbjct: 174 VYGPRQAVDNPYQGVLGIFLGNIIRGEPIRIYGDGKQTRDFVFIDDVVDAWVGALDNP-A 232
Query: 288 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV--EIVHYDPKAAGIDAKKAFPFRNMHFYA 345
+ IFNL S R ++ +A L A G V Y P+ P A
Sbjct: 233 SHGKIFNLGSGRQTSISELADLALGALGRTRADHPVLYHPER---------PGEQRSVQA 283
Query: 346 EPRAAKDILGWRSTTNLPEDLKE 368
+ A +LGW T L + L E
Sbjct: 284 DVAYAGSVLGWTPRTRLEQGLAE 306
>gi|433638117|ref|YP_007283877.1| nucleoside-diphosphate-sugar epimerase [Halovivax ruber XH-70]
gi|433289921|gb|AGB15744.1| nucleoside-diphosphate-sugar epimerase [Halovivax ruber XH-70]
Length = 337
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 102/249 (40%), Gaps = 36/249 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA-GGKTVWGDPAE 143
GG IG +L +ELL ++VT+ G+ + PF + + G +T GD E
Sbjct: 8 GGTRFIGRHLVEELLEHDYDVTLFNRGNHEN------PFADTDGVDHVQGDRTDDGDLVE 61
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV--- 200
V FD V +++ V D V +++ISS Y D P
Sbjct: 62 AAAVEPDAVFDCVA-YFPRDVRQATTVFD-----DVDAYVYISSGAAYGREDLPKREGFT 115
Query: 201 -------------EGDVVKPDAGHVQVEKYISE---NFSNWASFRPQYMIGSGNNKDCEE 244
E D P + ++ + E + N S RP + G + + +
Sbjct: 116 PLCECTDEQAIADESDTYGP--RKAEGDRAVFEAAADGVNAMSVRPPIVYGPHDYTERLD 173
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
++ DRI R V +PG G + +V D++S + + E E S +N+ RAVTL
Sbjct: 174 YWIDRIHRFDRVVLPGDGTNLWHRVYVEDVASGMRIVAEEGEPGES--YNVGDQRAVTLR 231
Query: 305 GMAKLCAQA 313
GM +L ++
Sbjct: 232 GMLELIDES 240
>gi|406974854|gb|EKD97809.1| Isoflavone reductase [uncultured bacterium]
Length = 331
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 109/257 (42%), Gaps = 35/257 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G +L L +GH+VT G E +D + G T+ GD
Sbjct: 7 GGTVFLGRHLVDAALNAGHQVTTFRRGRERAD-------------LPEGVATIIGDRRGD 53
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS----AGIYKPA--DEPP 198
+ +D V+D +G V A A SS V Q++FISS A + KP ++ P
Sbjct: 54 HAELRYGQWDAVVDCSGYFPAHVASAAK-ALSSHVGQYIFISSVLQYADLSKPGIREDDP 112
Query: 199 HVEGDVVKPDAGH--------VQVEKYISENFSNWAS-FRPQYMIGSGNNKDCEEWFFDR 249
+G+ + P + E+ + + F A+ RP Y++G + + + R
Sbjct: 113 SAQGNFIFPPPLNELTYGPLKAMCEQEVLQVFPGRATILRPGYLVGPRDRSERFPTWVRR 172
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV--SDRAVTLDGMA 307
+ +PGSG + VRDL++ + +E ++ IFN+ S R M
Sbjct: 173 ASMGGVMLVPGSGNRAWQFIDVRDLAAWIISIIER---RTTGIFNVTGPSCRECAGSLMD 229
Query: 308 KLCAQAAGLPVEIVHYD 324
++ + A G P+ I H D
Sbjct: 230 RIVSAAGGSPI-IRHID 245
>gi|452207826|ref|YP_007487948.1| NAD-dependent epimerase/dehydratase [Natronomonas moolapensis
8.8.11]
gi|452083926|emb|CCQ37254.1| NAD-dependent epimerase/dehydratase [Natronomonas moolapensis
8.8.11]
Length = 331
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 119/314 (37%), Gaps = 44/314 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA-GGKTVWGDPAE 143
GG IG + ELL +G+EVT+ G PF + + G +T D
Sbjct: 9 GGTRFIGRHTVSELLSAGYEVTMFNRG------THANPFADEDRVTHVEGDRTNDSDLRR 62
Query: 144 VG-NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
G +V + D V AV AD V ++++SS Y AD P EG
Sbjct: 63 AGLDVEPDIVIDCVAYRPRDVHTAVDVFAD------VDAYVYVSSGSAYG-ADRVPKREG 115
Query: 203 DVVKPDAGHVQVEKYISENFS------------------NWASFRPQYMIGSGNNKDCEE 244
+ + E++ N S RP + G + + +
Sbjct: 116 ETPLCPCSVAEATDDTDESYGPRKAEGDRAVFSAADRGVNAMSVRPPVVYGPHDYTERFD 175
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
++ DR+ + +PG+G +A+V D++ L + E +S +N+ D A L
Sbjct: 176 YWIDRVDTHDRIVVPGNGSSLWQLAYVEDVARALRIVAER--GSSGEAYNVGEDHAPILR 233
Query: 305 GMAKLCAQAAG---LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTN 361
+L A+A PV + A G+ A AFP + + LGW ST
Sbjct: 234 EWVELVAEACATDVTPVFASERELGAVGLSA-DAFPLYRGYPHLLDTTKLRELGWEST-- 290
Query: 362 LPED--LKERFEEY 373
P D L+E E+
Sbjct: 291 -PHDRALRETVTEH 303
>gi|406892407|gb|EKD37764.1| NAD-dependent epimerase/dehydratase [uncultured bacterium]
Length = 341
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 132/337 (39%), Gaps = 37/337 (10%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE----IVSAGGKTVWG 139
+GG G L + LL GH+V ++ V + ++ P +E +A K V G
Sbjct: 6 TGGTGFTGHNLTQRLLQDGHQVRLL-VRSRSRVALEPQPTLEIHEGDIRDRAAVDKAVAG 64
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNL--DAVRPVADWAKSSGVKQFLFISSAGIYKPADEP 197
A++ N+ +D + +++ + R + + A V++F+ S+ G++ P
Sbjct: 65 -VAKIFNLAAMYRTASAVDQDYRDIHVEGTRHLLEAAVRHHVERFVHCSTVGVHGDVKAP 123
Query: 198 PHVEGDVVKPD--------AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
P E P G + ++ + N RP + G G+ + + + +
Sbjct: 124 PATEESPYAPADIYQRTKLEGELLAREFAARNGLALTVIRPTAIYGPGDLRLLKLF---K 180
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
+ + P+ G+G + ++ ++ DL LA E EAA +F + + + LD +
Sbjct: 181 LAVRNITPVIGTGKIYYHMVYIDDLVEGFILASE-AEAAIGQVFIVGGEEKMVLDDLLSA 239
Query: 310 CAQAAGLPVEIVHYDP----KAAGIDAKKAFPF--------RNMHFYAEPR-----AAKD 352
A+ G P +H A + K P R + F+ + R K
Sbjct: 240 IARITGRPESKIHIPALPFQLAGSLCEKICIPLGLEPPIYRRRVDFFTKSRLFDTGKVKR 299
Query: 353 ILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDD 389
+LG+ L E L+ Y + G M F + D
Sbjct: 300 LLGYAPKFGLQEGLRRTAAWYKQQGMLFYQMTFMLSD 336
>gi|395330720|gb|EJF63103.1| NAD-dependent epimerase/dehydratase [Dichomitus squalens LYAD-421
SS1]
Length = 1011
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 149/352 (42%), Gaps = 77/352 (21%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF--NRFNEIV 130
+K K++++ +GGH IG ++A++L+ G++V + +D + +PPF E+V
Sbjct: 3 DKSKLILI---TGGHGFIGGHVARKLVSLGYDVRV-------TDLVGRPPFAATLVKEVV 52
Query: 131 SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGK--NLDAVRPVADW--------------- 173
DP+ VV GV DVVL + + D+
Sbjct: 53 LGN----LCDPSFCCRVVQGV--DVVLHFAATMGGMGTIHAANDFIIYQENHTMTTNLLS 106
Query: 174 -AKSSGVKQFLFISSAGIYKPADEPPHV-----EGDVVKPDAGHVQ----VEKYISENFS 223
K++GV+ F + SSA +Y + + V EGDV K H Q +EK +SE
Sbjct: 107 ACKAAGVRGFFYASSACVYPESLQGSGVDVSLAEGDVWKHPPPHPQGLYGLEKLVSELGL 166
Query: 224 NWASFRPQYMIGSGNN--KDCEEWFFDR------IVRKR-----------PVPIPGSGMQ 264
+ + Q + +N W+ R +RK I G G Q
Sbjct: 167 HQHASTLQVRVARFHNIYGPMGSWYGGREKVPAAFLRKALAAKLSQDPEVHFEIWGDGSQ 226
Query: 265 FTNIAHVRD-LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY 323
+ + D + ++L L E+ S N+ SD+AV++ +A + +AA + E V +
Sbjct: 227 RRSFCFIDDAVEAILRLL----ESDCSEPVNIGSDQAVSVRQLADIALRAASIDPESVKF 282
Query: 324 DPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
D K +D + RN ++ K+ LGW +L E ++ R E+++
Sbjct: 283 DHK---LDRPQGVGSRN----SDNTFVKETLGWEPQVSLEEGMR-RTGEWIR 326
>gi|330812025|ref|YP_004356487.1| NAD-dependent lipopolysaccharide biosynthesis-related
epimerase/dehydratase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423699588|ref|ZP_17674078.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas
fluorescens Q8r1-96]
gi|327380133|gb|AEA71483.1| putative NAD-dependent lipopolysaccharide biosynthesis-related
epimerase/dehydratase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|387997043|gb|EIK58373.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas
fluorescens Q8r1-96]
Length = 309
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 110/278 (39%), Gaps = 43/278 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF-NRFNEIVSAGGKTVWGDPA 142
+GG IG +L LL GH V I+ D ++ K P N E++ D A
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILD--DLSTGKRSNLPLDNPALELIEGD----VADAA 62
Query: 143 EVGNVVGGVT--------------FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA 188
V V+ G + D + + N V + + SGVK+ LF SSA
Sbjct: 63 LVARVMAGCSAVAHLAAVASVQASVDDPVRTHQSNFIGTLNVCEAMRQSGVKRVLFASSA 122
Query: 189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNN 239
+Y E ++ + K +K SE + ++ +R Q+ + G
Sbjct: 123 AVYGNNGEGESIDEETPKAPLTPYASDKLASEFYFDF--YRRQHDLEPVVFRFFNIYGPR 180
Query: 240 KD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+D F +R + P+ + G G Q + +V DL +L A+E PE +
Sbjct: 181 QDPSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFVYVEDLVDLLVQAIEKPEVEVGAV 240
Query: 293 FNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
N+ ++A TL M + A G LP + Y P +G
Sbjct: 241 -NVGWNQATTLKQMLQALAAVVGDLPP--ISYGPARSG 275
>gi|430003772|emb|CCF19561.1| putative NAD-dependent epimerase/dehydratasen; putative UDP-glucose
4-epimerase [Rhizobium sp.]
Length = 368
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F R+ +P I G Q + HVRD++ LA E P +AS ++ N+ S +A T++
Sbjct: 227 FASRLANGQPPTIFEDGQQRRDFVHVRDVARAFRLAYEQP-SASGHVINVGSGQAYTVEE 285
Query: 306 MAKLCAQAAGLPV---EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNL 362
+A L A A G+P EI+H KA D + F A+ A+++LG++ L
Sbjct: 286 VATLLADAMGVPEIKPEIMH---KARSGDIRNCF--------ADISKARELLGFKPQYKL 334
Query: 363 PEDLKERFEEYVK 375
+ L F E+V+
Sbjct: 335 EDSLAP-FVEWVR 346
>gi|410666645|ref|YP_006919016.1| UDP-glucuronate 5'-epimerase [Thermacetogenium phaeum DSM 12270]
gi|409104392|gb|AFV10517.1| UDP-glucuronate 5'-epimerase [Thermacetogenium phaeum DSM 12270]
Length = 316
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 114/278 (41%), Gaps = 36/278 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFN---EIVSAGGKTVWGD 140
+GG IG +L LL G +VT++ +N D P R N K V D
Sbjct: 7 TGGAGFIGSHLVDRLLAEGWQVTVV----DNFDPFYDPEIKRKNIAPHFDYGSYKLVEVD 62
Query: 141 PAEVGNVVGGVT--FDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQF 182
++G + +T +DV++ K N+ + + + AK GVKQF
Sbjct: 63 IRDLGALREQLTGEYDVIVHLAAKAGVRPSIRDPIGYQDVNVRGTQNLLELAKEWGVKQF 122
Query: 183 LFISSAGIYKPADEPPHVEGDVV----KPDAGHVQVEKYISENFSN-----WASFRPQYM 233
+F SS+ +Y P E D V P A + + +S+ + + R +
Sbjct: 123 VFASSSSVYGVNPHVPWREDDCVLMPISPYAATKVAGELLGHVYSHLYGIRFIALRFFTV 182
Query: 234 IGSGNNKDCEEWFFDRIVRKR-PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
G D F R++ KR P+P+ G G + ++ D+ + A++ + +
Sbjct: 183 YGPRQRPDLAIHKFARLMLKREPIPVYGDGTSRRDYTYIDDIIQGVRAAMDYTK-TQYEV 241
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 330
NL ++R V+L + + + G+ ++ + P+ +
Sbjct: 242 INLGNNRTVSLMELIRALEEVLGVEAKLEYLPPQPGDV 279
>gi|398940755|ref|ZP_10669433.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM41(2012)]
gi|398162372|gb|EJM50568.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM41(2012)]
Length = 315
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 119/279 (42%), Gaps = 32/279 (11%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-------KT 136
+GG IG +L + LL SG+ V ++ D +S K+ P +R + + G +
Sbjct: 9 TGGAGFIGSHLVEALLESGYSVRVLD--DLSSGKLSNLPIDRCHLTLVVGDVADAPTVER 66
Query: 137 VWGDPAEVGNVVGGVTFDVVLDN----NGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
D + V ++ + +D+ + N + + + +GV++ ++ SSA IY
Sbjct: 67 AMKDCSAVVHLAAVASVQASVDDPVATHQSNFVGTLNICEAMRQAGVRRVVYASSAAIYG 126
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIG---------SGNNKD-- 241
E + D K +K SE+F ++ +R Q+ + G +D
Sbjct: 127 NNGEGMAITEDTPKNPLTPYAADKLASEHFLDF--YRRQHGLEPVILRFFNIYGPRQDPS 184
Query: 242 -----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
F +R +K P+ + G G Q + +V DL +L AV E + + N+
Sbjct: 185 SPYSGVISIFSERAQKKLPITVYGDGEQTRDFVYVNDLVKVLVQAVSESEPINEPV-NVG 243
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
+R+ +++ +A ++ G + + + P++ I +A
Sbjct: 244 FNRSTSVNELAATLSELLGRSLTLNYDAPRSGDIKHSRA 282
>gi|392943991|ref|ZP_10309633.1| methyltransferase, FkbM family [Frankia sp. QA3]
gi|392287285|gb|EIV93309.1| methyltransferase, FkbM family [Frankia sp. QA3]
Length = 599
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 15/132 (11%)
Query: 174 AKSSGVKQFLFISSAGIYKPADEP-PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQY 232
A+++G+++ +F+S+ GI+ D P HV + E I + +W RP
Sbjct: 88 AEAAGIRRAVFLSTTGIFTSLDPPSKHVR----------IAAEHTIETSGLDWTIIRPTM 137
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPV-PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G ++++ +VR+ PV P+PG G + HV DL++ + A+ + +AA
Sbjct: 138 IYGGPDDRNMARLLA--LVRRVPVLPLPGGGRRVHQPVHVDDLAATVLRAL-SADAAVGR 194
Query: 292 IFNLVSDRAVTL 303
+++ RA+ L
Sbjct: 195 GYDVAGPRALPL 206
>gi|406943288|gb|EKD75324.1| 3-beta hydroxysteroid dehydrogenase/isomerase [uncultured
bacterium]
Length = 315
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 119/315 (37%), Gaps = 52/315 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--P 141
+GG IG LAK LL G +V I D + F+ + G W D
Sbjct: 6 TGGAGFIGSQLAKRLLKEGWKVFIF-------DNLSSGYFHN----IPKGAVFKWLDLRD 54
Query: 142 AEVGNVVGGVTFDVVL---DNNGKNLDAVRPVAD-------------WAKSSGVKQFLFI 185
+ ++ DVV + G+ L PV D W+ VKQF+F
Sbjct: 55 QDAFTLLPKEQIDVVFHLASHVGQELSFENPVFDLEVNAMTTMKLLKWSLEKKVKQFIFT 114
Query: 186 SSAGIYKPADEPPHVEGDVVKPDA----GHVQVEKYISENFS----NWASFRPQYMIGSG 237
SS IY A E P +E V+P + G + E Y+ + + N S R + G G
Sbjct: 115 SSMNIYGNATEFPVIEDTKVQPPSPYAVGKIASE-YLCQIYQGLGVNTTSLRLFNVYGPG 173
Query: 238 NN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ + + +++K P+ + GS +F + V D+ V+ E A +
Sbjct: 174 QDLQNMKQGMVSIYLAYLLKKEPILVRGSQERFRDFVFVEDVVDAFYRCVD--ERAYGRV 231
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 352
+N+ + R + + K+ A P A I + Y + +
Sbjct: 232 YNVATGRKTYVKELLKMLASE-------FTSAPDAYPIIFDEPTLCDQFGIYGDASRLQK 284
Query: 353 ILGWRSTTNLPEDLK 367
LGW+ + +L E ++
Sbjct: 285 ELGWKPSVSLEEGIR 299
>gi|390933719|ref|YP_006391224.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389569220|gb|AFK85625.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 316
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 65/128 (50%), Gaps = 13/128 (10%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F D+++ + I G G Q + +V+D++ LA+E + I N+ ++R+ T++
Sbjct: 187 FIDKMLSGKNPVIFGDGNQTRDFIYVKDVAKANLLALE---KGDNEIINISTNRSTTINE 243
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
+ ++ + P++ ++ +P+ I +H Y + + AKD+L W+ +L +
Sbjct: 244 LVEIMNKFMEKPLKPIYKEPRKGDI----------LHSYLDNKKAKDVLRWKPDYSLEDG 293
Query: 366 LKERFEEY 373
LKE + Y
Sbjct: 294 LKETIKYY 301
>gi|448640639|ref|ZP_21677542.1| hypothetical protein C436_12263 [Haloarcula sinaiiensis ATCC 33800]
gi|445761949|gb|EMA13188.1| hypothetical protein C436_12263 [Haloarcula sinaiiensis ATCC 33800]
Length = 359
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 116/298 (38%), Gaps = 40/298 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + E +G++VT++T G ++ PF E+ G D E
Sbjct: 40 GGGRFIGRHTVTEFRDAGYDVTMLTRG------RRQNPFTN-AEVAHIEGDRRERDTLET 92
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
V DVV+D + VR D G +++ISS Y A+ P EG+
Sbjct: 93 ARER--VNPDVVVDCVAYFPEDVRVATDVFADVGA--YVYISSGAAYG-AERTPKREGET 147
Query: 205 VKPDAGHV-------QVEKY-------------ISENFSNWASFRPQYMIGSGNNKDCEE 244
P AG E Y +E+ S RP + G + +
Sbjct: 148 --PLAGCTAEQATTDSAETYGPRKAEGDREVFAAAEDGVQAMSVRPTVVYGPYDYTERFA 205
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
++ DR+ V +P G+ +A+V D++S L L E A+ +N+ + A TL
Sbjct: 206 YWVDRVAEYDRVVVPSDGLSLWQMAYVEDVASALRLVAER--GAAGEAYNVGDEHAPTLR 263
Query: 305 GMAKLCAQAAGLPVEIV---HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRST 359
L A+ VE + + +AAG+ A FP + A LGW ST
Sbjct: 264 EWVDLLARVHETDVETIGVGERELRAAGL-APDDFPIYRDSPHLLSTAKLRNLGWSST 320
>gi|222056005|ref|YP_002538367.1| NAD-dependent epimerase/dehydratase [Geobacter daltonii FRC-32]
gi|221565294|gb|ACM21266.1| NAD-dependent epimerase/dehydratase [Geobacter daltonii FRC-32]
Length = 328
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 122/322 (37%), Gaps = 53/322 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--- 140
+GG IG +LA+ L GH++ I+ +N + P R N +AG G
Sbjct: 6 TGGAGFIGSHLAERLFLCGHDIIIV----DNFNDFYSPAVKRRNFTETAGNAAACGRRLL 61
Query: 141 --------------------PAEVGNVVGGVTFDVVLDN----NGKNLDAVRPVADWAKS 176
P V ++ +DN N+ + + AK+
Sbjct: 62 LCEGDIRDEEFIRAIFTQELPDAVIHLAAAAGVRPSIDNPLLYEEVNVRGTMNLLEAAKA 121
Query: 177 SGVKQFLFISSAGIYKPADEPPHVEGDVV----KPDAGHVQVEKYISENFS-----NWAS 227
GV+ FLF SS+ +Y + P E D V P A + + I + N A
Sbjct: 122 IGVRLFLFASSSSVYGNNPKVPFAEADPVDNPISPYAATKKAGELICHTYHHLYDINIAC 181
Query: 228 FRPQYMIGSGNNKDCEEWFFDRIVRK-RPVPIPGSGMQFTNIAHVRDLSSMLTLAVE--N 284
R + G D F R++ + +P+P G G + ++ D+ + + A++ N
Sbjct: 182 LRFFTVYGPRQRPDLAISKFVRLIEQGKPIPFYGDGSTSRDYTYIGDIVAGIEKALQWVN 241
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFY 344
+IFNL V L+ + K+ G ++ P AG D ++ F
Sbjct: 242 TGEKRYDIFNLGGSSPVALNRLVKIIEHQLGKKA-VLECLPMQAG-DVERTF-------- 291
Query: 345 AEPRAAKDILGWRSTTNLPEDL 366
A + +LG++ T + E +
Sbjct: 292 ANIEKSSSVLGYKPVTPIEEGI 313
>gi|222479221|ref|YP_002565458.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC
49239]
gi|222452123|gb|ACM56388.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC
49239]
Length = 330
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 122/296 (41%), Gaps = 35/296 (11%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + +LL + +EV ++ G + PF+ + + G + ++
Sbjct: 9 GGTRFIGRHTVSDLLANSYEVGMLNRG------THENPFSDDDRVTHVEGDR--KNERDL 60
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
+ D+V+D V D + V +++ISS Y +E P EG+
Sbjct: 61 RTAKLSIEPDIVIDCVAYQPTDVETATD--VFADVDGYVYISSGDSYA-TEEIPKREGET 117
Query: 205 -VKP----DAGHVQVEKY-------------ISENFSNWASFRPQYMIGSGNNKDCEEWF 246
++P A + E Y +E + RP + G + + +++
Sbjct: 118 PLRPCTPEQATDDEPETYGNRKAEGDRAVFAAAEEGVRAMAVRPCIVYGPYDYTERLDYW 177
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
DR++ + V +PG G + A+V D++S L + E EA ++ +N+ +A+TL
Sbjct: 178 IDRVLSQDHVVVPGDGQNLWHRAYVEDVASGLRIVAERGEAGAA--YNVGDRQALTLAET 235
Query: 307 AKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRST 359
+ A AAG E+V A G++ +R + A D LGW ST
Sbjct: 236 LETIADAAGTDCEVVTASADALAAGGLEPDDFVLYREYPHLLDTCALAD-LGWEST 290
>gi|408677853|ref|YP_006877680.1| UDP-glucose 4-epimerase [Streptomyces venezuelae ATCC 10712]
gi|328882182|emb|CCA55421.1| UDP-glucose 4-epimerase [Streptomyces venezuelae ATCC 10712]
Length = 288
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 78/203 (38%), Gaps = 22/203 (10%)
Query: 161 GKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ------- 213
G NL W SG + ++ SS+ Y A + P +V+ D G+ Q
Sbjct: 73 GTNLGLDAWYMRWLARSGTPRAVYFSSSAAYPVALQQPGPIRRLVETDIGYQQPGRPDAT 132
Query: 214 --VEKYISENFSNWASFRPQYMI------GSGNNKDCEEWF--FDRIVRKR--PVPIPGS 261
+ K E +A M G G ++D F F R R+R P I G
Sbjct: 133 YGLAKLTGEQLCQYAEAEGTRMTILRPFSGYGGDQDEAYPFPAFIRRARERQDPFEIWGD 192
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
G + HV D+ AVE + NL + RA T D +AK+ AAG E+
Sbjct: 193 GTSTRDWIHVDDIVDATLAAVEE---GVTGPVNLGTGRATTFDQLAKMVTAAAGYRPELK 249
Query: 322 HYDPKAAGIDAKKAFPFRNMHFY 344
H G+ + P R + F+
Sbjct: 250 HLPAAPQGVHHRVCDPSRMLDFH 272
>gi|358458704|ref|ZP_09168911.1| dTDP-glucose 4,6-dehydratase [Frankia sp. CN3]
gi|357078015|gb|EHI87467.1| dTDP-glucose 4,6-dehydratase [Frankia sp. CN3]
Length = 391
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 126/343 (36%), Gaps = 68/343 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG ++ LL +GHEV + + N+D + +++ T D E
Sbjct: 6 TGGSGFIGAHVVDRLLDAGHEVRALDLDVSNADPRAD---GQAVDVLDLDAVTAALDGCE 62
Query: 144 -VGNVVGGVTFDVVL-DNNGK---NLDAVRPVADWAKSSGVKQFLFISSAGIYK--PADE 196
V ++ G D+ D G N++ V + A+ G+++ LF S+ +Y P E
Sbjct: 63 AVFHIAGMSNVDIAFADPVGTVRLNVEGTGNVCEAARRRGLRRVLFASTVWVYGAVPETE 122
Query: 197 PPHVE--------------------------GDVVKPDA-------GHVQVEKYISENFS 223
P GD + DA GHV ++
Sbjct: 123 TPGARPDSHASASASASADVGDGDSRGRGRHGDGLTEDALIELDRAGHVYTSTKLAAELL 182
Query: 224 NWASFRPQYMI-----------GSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHV 271
S+R Y + G G + F R + P+ + G G QF +V
Sbjct: 183 -LHSYRETYGLPFTILRYGIPYGPGMRDELVLARFVARALAGEPLTVAGDGRQFRRYVYV 241
Query: 272 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID 331
RDL+ A+ P A ++ I ++R LD + A G+ +E V P
Sbjct: 242 RDLADAHVRALTTPAAENATIALEGAERVSVLDMAEAVRAHFPGIEIEHVPARPG----- 296
Query: 332 AKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 374
+R AE A +L WR TT + +++ E Y+
Sbjct: 297 -----DYRGREVSAE--LAARLLDWRPTTTFRDGVRQYIEWYL 332
>gi|408404923|ref|YP_006862906.1| UDP-glucose 4-epimerase [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408365519|gb|AFU59249.1| putative UDP-glucose 4-epimerase [Candidatus Nitrososphaera
gargensis Ga9.2]
Length = 324
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 109/265 (41%), Gaps = 46/265 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW----G 139
+GG IG ++ EL+ G E ++ D + N +V G ++ G
Sbjct: 9 TGGAGFIGSHIVDELIARGIETYVI-------DNLST---GTLNNLVQHRGNSLLHFMAG 58
Query: 140 DPAEVGNVVGGVTFDVVLDN----------------NGKNLDAVRPVADWAKSSGVKQFL 183
D E ++ DVV + N++ + ++ SGVK+F+
Sbjct: 59 DVREAEALLQDTNIDVVFHEAAIASVPKSVSHPLLVHDVNVNMTLHLLNYCVKSGVKRFI 118
Query: 184 FISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENFSNWA--SFRPQYMIGSG 237
F SSA +Y E E +P+ AG + +E Y+ + + +Y G
Sbjct: 119 FASSAAVYGIL-ESKATEDMACRPNSPYGAGKLAIEDYLHAYRRTYGLETVMLRYFNVYG 177
Query: 238 NNKDCEEW------FFDRIVR-KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
+ ++ F ++++ +RPV I G G+Q + HV D+ LA+++ AA
Sbjct: 178 PRQIYSDYSGVITIFINKLLEGERPV-IFGDGLQVRDFVHVSDIVQANMLAMDSA-AAVG 235
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAG 315
+FN+ S RA + M K+ + G
Sbjct: 236 EMFNVASGRATNILEMVKIIKKLMG 260
>gi|313683518|ref|YP_004061256.1| NAD-dependent epimerase/dehydratase [Sulfuricurvum kujiense DSM
16994]
gi|313156378|gb|ADR35056.1| NAD-dependent epimerase/dehydratase [Sulfuricurvum kujiense DSM
16994]
Length = 312
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 91/217 (41%), Gaps = 22/217 (10%)
Query: 170 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYIS--ENFS 223
+ ++A G+ +F++ S+ IY D+ P E P + + + E+Y+ +
Sbjct: 100 LLNFAVEEGIGRFIYASTMSIYGDVDDKPIRENQAKNPKSYYGITKLAAEQYVRVFSDRL 159
Query: 224 NWASFRPQYMIGSGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 278
N SFR + G G N + + +R PV + G ++ ++ ++ D+ +
Sbjct: 160 NTTSFRLFNVYGPGQNMANLKQGMVSIYLAYFMRNEPVIVKGFKERYRDLTYIDDVVDVW 219
Query: 279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 338
T +++NP +NL + + T++ + A G P +++ + P
Sbjct: 220 TASIDNP-LTYGKTYNLATGKKTTVEALLNELKTAWGSPEYPIYF---------TEGTPG 269
Query: 339 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
YA+ ++ LGW +L E + F +VK
Sbjct: 270 DQFGIYADITQLQNDLGWEPKVSLSEGI-HHFVNWVK 305
>gi|406965661|gb|EKD91272.1| hypothetical protein ACD_30C00029G0001 [uncultured bacterium]
Length = 262
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 31/212 (14%)
Query: 175 KSSGVKQFLFISSAGIYKPADEPPHVEG---DVVKPDAG-HVQVEKYISENFSNWA---- 226
K GVK+ +F SSA +Y P EG D P A + VE+++S N
Sbjct: 59 KEKGVKRIIFSSSATVYGEPKTLPLTEGMPLDSANPYAASKIAVEQFLSAYHKNHGFDVT 118
Query: 227 ---SFRPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 279
F P G G + E F + K+PVP+ G Q + ++ DL+ T
Sbjct: 119 ILRYFNP---YGPGEEHEPETHAIPNFIKNGLDKKPVPLYWKGEQTRDFIYIEDLAKAHT 175
Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
+ ++ + NIFN+ +++ V + + + G +E+ + + +
Sbjct: 176 VVLDQ---SGFNIFNVGTEQGVRIIDVINKLSDILGYTLEVEDLGDRPGDVRSN------ 226
Query: 340 NMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 371
YA + K+ GW + T+L E L++ E
Sbjct: 227 ----YASSQKLKESTGWSAQTDLNEGLRKTVE 254
>gi|21220686|ref|NP_626465.1| reductase [Streptomyces coelicolor A3(2)]
gi|7799239|emb|CAB90862.1| putative reductase [Streptomyces coelicolor A3(2)]
Length = 366
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 121/305 (39%), Gaps = 42/305 (13%)
Query: 54 PASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE 113
P RR S +A + ++L++ GG +G + + LG G EVT++ G
Sbjct: 2 PPLCRRQSGVPSGRRARHSGGMRLLVL----GGTEFVGRSVVEAALGRGWEVTVLHRG-- 55
Query: 114 NSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV-TFDVVLDNNGKNLDAVRPVAD 172
+ PP R G +T P + + G T+D V+D AVR A
Sbjct: 56 ---RHAPPPGVRALH----GDRTA---PDGLTALTGAEDTWDAVVDTWSAAPRAVRDAAR 105
Query: 173 WAKSSGVKQFLFISSAGIYKP------ADEPPHVEGDVVKPDAGHVQ-------VEKYIS 219
+ +++++SS +Y A++ P VEG DAG E +
Sbjct: 106 LLRQR-AGRYVYVSSCSVYAWAPPAGYAEDAPLVEG--ASADAGQRDYARDKRGAELAVL 162
Query: 220 ENFSNWAS--FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 277
+ F S R ++G N W+ +R+ R PV PG VRDL+
Sbjct: 163 DAFGADRSVLVRAGLILGPYENVGRLPWWLNRLARGGPVLAPGPRDLPLQYIDVRDLADW 222
Query: 278 LTLAVENPEAASSNIFNLVSDRA-VTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAK 333
+ AVE S +NLVS T+ G+ + CA G E+ P+ AAGI+
Sbjct: 223 VLGAVER---ELSGPYNLVSPPGHTTMGGLLEACATVTGGTAELRWTSPETVLAAGIEPW 279
Query: 334 KAFPF 338
P
Sbjct: 280 VQLPV 284
>gi|407461654|ref|YP_006772971.1| NAD-dependent epimerase/dehydratase [Candidatus Nitrosopumilus
koreensis AR1]
gi|407045276|gb|AFS80029.1| NAD-dependent epimerase/dehydratase [Candidatus Nitrosopumilus
koreensis AR1]
Length = 307
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 126/316 (39%), Gaps = 50/316 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA 142
+GG IG +L K L+ HE+TI + + + +KK PFN+ K + GD
Sbjct: 8 TGGAGFIGRHLVKALIKQNHEITIYDNFSNSSKENLKKFPFNK--------SKVITGDIR 59
Query: 143 EVGNVV-GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFI 185
+ +V + D+V+ K N+D V + +K+ +
Sbjct: 60 NLDDVSKNSIDNDIVIHLAAKISVNESIQNPQETFETNVDGTENVLKACHVNKIKKIFAL 119
Query: 186 SSAGIYKPADEPPHV--EGDVVKPDAGHVQVEKYISENFSNWAS--------FRPQYMIG 235
SSA +Y + HV E + + P + + + ++ + E N++ FR + G
Sbjct: 120 SSAAVY-GNNILNHVSIESENIHPISPYGKSKQKMEEKIINFSKNYDFDSKIFRLFNVYG 178
Query: 236 SGNNKDCE---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
G + + F + +K P+ I G G Q + + D+ ++ + + I
Sbjct: 179 EGQSPEYAGVISKFVECSKKKLPLTIFGDGKQTRDFVAIEDVVNLFVKVISLDSKKNGEI 238
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 352
+N+ S + ++ +A L + + +EI + ID H A + AK+
Sbjct: 239 YNVASGKYTSILELANLIKKLSNKELEIKFEKKRIGEID----------HSTASIKKAKE 288
Query: 353 ILGWRSTTNLPEDLKE 368
L + L + +++
Sbjct: 289 ELDYEPKIELSQGIRK 304
>gi|336402015|ref|ZP_08582759.1| hypothetical protein HMPREF0127_00072 [Bacteroides sp. 1_1_30]
gi|423213735|ref|ZP_17200264.1| hypothetical protein HMPREF1074_01796 [Bacteroides xylanisolvens
CL03T12C04]
gi|335947617|gb|EGN09402.1| hypothetical protein HMPREF0127_00072 [Bacteroides sp. 1_1_30]
gi|392693664|gb|EIY86895.1| hypothetical protein HMPREF1074_01796 [Bacteroides xylanisolvens
CL03T12C04]
Length = 373
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 112/275 (40%), Gaps = 41/275 (14%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA 132
+KKKVL++ GG + + KE L G ++T++ G KK + + I+
Sbjct: 2 DKKKVLLL----GGTGTLSMGVLKEALNKGWDITVLNRGIH-----KKHIPDSVHRIIGD 52
Query: 133 GGKT-VWGDPAEVGNVVGGVTFDVVLD---NNGKNLDAVRPVADWAKSSGVKQFLFISSA 188
K W + N FDVV+D N ++ V P+ + KQ++FISSA
Sbjct: 53 FKKVETWKEALHSCN------FDVVVDFLSRNPADISRVFPIL----KNNCKQYIFISSA 102
Query: 189 GIYKPADEPPHVEGDVVKPD-AGHVQVEKY--------ISENFSNWASFRPQYM------ 233
+Y+ +E ++ D KP+ + VEKY +S+N + + Y+
Sbjct: 103 CVYRRNEEDFPIKEDSPKPNMSWDYNVEKYNSEKELVKLSQNAPCYYTIIRPYITYDDER 162
Query: 234 --IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
G + +R+ +P+ + G T + +V D + + N AA +
Sbjct: 163 IPFGIAPSYKYHRTIIERLKNGKPMFVWNEGNNITTLTYVSDFAKGVVGLFSN-NAAINE 221
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 326
F++ SD T + + L I H D K
Sbjct: 222 DFHITSDYQYTWNDFWSIFLAKLNLKSTIYHVDAK 256
>gi|296139544|ref|YP_003646787.1| UDP-glucose 4-epimerase [Tsukamurella paurometabola DSM 20162]
gi|296027678|gb|ADG78448.1| UDP-glucose 4-epimerase [Tsukamurella paurometabola DSM 20162]
Length = 327
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 118/314 (37%), Gaps = 61/314 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G + LL GH+VT++ D + NR E V AG V GD A
Sbjct: 6 TGGAGYVGSVCTQVLLEQGHDVTVL-------DDLSTG--NR--EAVPAGATFVEGDVAT 54
Query: 144 VG-NVVGGVTFDVVLDNNGKNL---DAVRPVADWAK-------------SSGVKQFLFIS 186
++ FD VL K+L P W ++GV + +F S
Sbjct: 55 AARQILADGEFDGVLHFAAKSLVGESVTHPHKYWQGNVVTTLSLLDAMLAAGVPRLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIGS-- 236
+A Y + P E P + + I +++A S R + GS
Sbjct: 115 TAATYGEPESVPITEDARTAPTNTYGATKLAIDAAITSYATAYGLAAVSLRYFNVAGSYA 174
Query: 237 --GNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVE 283
G N++ E +++ + + + G+ G + HV+DL+ LA++
Sbjct: 175 GIGENREVETHLIPLVLQTALGQRADIAVFGADYPTADGTAVRDYVHVKDLADAHLLALD 234
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 343
+ + +IFNL S ++ + C + GL + V D +A
Sbjct: 235 HARTGAHDIFNLGSGEGFSVRQVIDTCREVTGLEIPEVAADRRAGDPAV----------L 284
Query: 344 YAEPRAAKDILGWR 357
A R A D LGWR
Sbjct: 285 VASSRKAHDELGWR 298
>gi|398886471|ref|ZP_10641348.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM60]
gi|398189786|gb|EJM77052.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM60]
Length = 309
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 111/277 (40%), Gaps = 41/277 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIV---------- 130
+GG IG +L LL GH V I+ + G ++ + P R IV
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILDDLSTGKRSNLALDNP---RVELIVGDVADAALVA 65
Query: 131 -SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
+ G + A V +V V D + + N V + + SGVK+ LF SSA
Sbjct: 66 RAMAGCSAVAHLAAVASVQASV--DDPVKTHQSNFIGSLNVCEAMRQSGVKRVLFASSAA 123
Query: 190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNK 240
+Y E ++ D K +K SE++ ++ +R Q+ + G +
Sbjct: 124 VYGNNGEGQSIDEDTPKEPLTPYASDKLASEHYFDF--YRRQHALEPVIFRFFNIFGPRQ 181
Query: 241 D-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
D F +R P+ + G G Q + +V DL +L A+E P+ +
Sbjct: 182 DPSSPYSGVISIFSERAQNGLPITVFGDGEQTRDFVYVEDLVDVLVQAIEKPQVEVGAV- 240
Query: 294 NLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
N+ ++A TL M + A G LP V Y P +G
Sbjct: 241 NVGWNQATTLKQMLEALKVAVGELPP--VSYGPARSG 275
>gi|389820968|ref|ZP_10209953.1| NAD-dependent epimerase/dehydratase [Planococcus antarcticus DSM
14505]
gi|388462658|gb|EIM05059.1| NAD-dependent epimerase/dehydratase [Planococcus antarcticus DSM
14505]
Length = 320
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 98/237 (41%), Gaps = 37/237 (15%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVLI+ GG + +G ++ ++LL GHEV + G N + F E+ K
Sbjct: 2 KVLII----GGTSFVGRHIVEKLLEKGHEVVLFNRGKSNP--------SVFPEL-----K 44
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
+ GD + + ++ V+D + + P+ + + + FIS+ +Y
Sbjct: 45 RILGDRRKDAAKLANEKWEAVIDTSTYTPADLEPILE---NILTDHYTFISTISVYTDFK 101
Query: 196 EPP----------HVEGDVVKPDAG---HVQVEKYISENFSNWASF-RPQYMIGSGNNKD 241
+ P V+GD V + V E+ I E + A RP ++G + D
Sbjct: 102 QGPVKENASVFEKKVQGDKVTGETYGPFKVMCERLIEERLGDRALIIRPGIVVGPADPTD 161
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
++ ++ K PV IPGS RDL+ V E ++ IFN+ +D
Sbjct: 162 RFTYWTIKLNGKGPVLIPGSKKSKVQWIDARDLAE---FTVSQMEKKATGIFNVAAD 215
>gi|357052393|ref|ZP_09113501.1| hypothetical protein HMPREF9467_00473 [Clostridium clostridioforme
2_1_49FAA]
gi|355386733|gb|EHG33769.1| hypothetical protein HMPREF9467_00473 [Clostridium clostridioforme
2_1_49FAA]
Length = 311
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 98/226 (43%), Gaps = 26/226 (11%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIY----KPADEPPHVEGDVVKPDAGHVQVEKYI 218
N+ V + + +G K+ ++ SSA I+ P + H + + + EK I
Sbjct: 96 NMIGTINVLEAMRHAGTKRIVYSSSAAIFGELTTPTIDEEHPQNADCQYGVSKLAAEKMI 155
Query: 219 SENFSNWASFRP---QYMIGSGNNKDCEEW------FFDRIVRKRPVPIPGSGMQFTNIA 269
+S F +Y G N+ + + F RI P+ I G G Q +
Sbjct: 156 LA-YSGLYGFEGICLRYFNIYGVNQRFDLYGNVIPIFAKRIFSGEPITIFGDGSQTRDFL 214
Query: 270 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
+ D++ +A + S++FN+ S ++T++ +AK+ + +G+ V+I HY P+ G
Sbjct: 215 NADDVARANYIAAMSD--VKSDVFNIGSGNSITINTLAKMMQRISGINVDI-HYAPERIG 271
Query: 330 IDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
D K H A + LG+++ L E LK+ + Y K
Sbjct: 272 -DVK--------HCKANADKIFNCLGYKAVVGLEEGLKKYIDWYKK 308
>gi|149182253|ref|ZP_01860733.1| possible isoflavone reductase [Bacillus sp. SG-1]
gi|148850022|gb|EDL64192.1| possible isoflavone reductase [Bacillus sp. SG-1]
Length = 336
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 92/224 (41%), Gaps = 32/224 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--PA 142
GG + +G ++A+ L GHEVT+ N K F + +++ G+ GD
Sbjct: 7 GGSSFVGKHIAQTALSKGHEVTLF-----NRGKTNPHLFPQAEKLIGDRGQ---GDLTAL 58
Query: 143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP--------A 194
E G+ +DVV+D +G V A K + +++FISS +YK
Sbjct: 59 EKGD------WDVVIDTSGYTPGKVEQSAALLKGR-INRYIFISSISVYKEFLTGEAKEG 111
Query: 195 DEPPHVEGDVVKPDAGHVQ------VEKYISENF-SNWASFRPQYMIGSGNNKDCEEWFF 247
DE +E + V+ G E+ + + S RP ++G + D ++
Sbjct: 112 DETGTLENEGVEEVNGETYGPLKALCEQKLEQILPGKVLSIRPGLIVGPDDTTDRFTYWV 171
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
R V +PGS + VRDL+ + L E EA N
Sbjct: 172 QRFSEGGEVLVPGSKERAIQWIDVRDLAQWIILMAEEGEAGIYN 215
>gi|15605715|ref|NP_213092.1| NADH dehydrogenase (ubiquinone) [Aquifex aeolicus VF5]
gi|2982870|gb|AAC06490.1| NADH dehydrogenase (ubiquinone) [Aquifex aeolicus VF5]
Length = 315
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 104/241 (43%), Gaps = 48/241 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK----------PPFNRFNEIVSAG 133
+G +G ++ +ELL G+EV G N K+++ F+ + I A
Sbjct: 6 TGATGFVGRHIVRELLNRGYEVH---AGVRNLSKLERLFGNQVKGYIVNFDEKDSIREAL 62
Query: 134 GKTVWGDPAEVGNVVG--------GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
GK +P V +++G G+TF+ V + KNL V +K VK+FLF+
Sbjct: 63 GKV---NPDFVIHLIGILYEEKKKGITFERVHYGHTKNLVEV------SKGFNVKKFLFM 113
Query: 186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEW 245
S+ G + DE P + E+ + + N+ FRP ++G ++
Sbjct: 114 SALGTH---DEAPS------RYHQTKRWAEREVINSGLNYTIFRPSIILGPE-----QKL 159
Query: 246 FFD--RIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
FFD +I + P V +P G VRD++ A++NPE I+ L + VT
Sbjct: 160 FFDMYKITKYIPVVALPDFGNYQFQPVDVRDVACAYAEALKNPE-TDRKIYELCGTKVVT 218
Query: 303 L 303
Sbjct: 219 F 219
>gi|303248850|ref|ZP_07335099.1| NAD-dependent epimerase/dehydratase [Desulfovibrio fructosovorans
JJ]
gi|302489719|gb|EFL49652.1| NAD-dependent epimerase/dehydratase [Desulfovibrio fructosovorans
JJ]
Length = 319
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 122/321 (38%), Gaps = 56/321 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G +A+EL G G T++T D + F + V V+ A+
Sbjct: 16 AGHRGLVGAAIARELTGLG--ATLVTRTHRELDLTNQAAVRAFFDSVRPA--AVFLAAAK 71
Query: 144 VGNVVGGVTF--DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-----KPADE 196
VG + T+ D + DN L V D AK++GVK+ +F+ S+ IY +P E
Sbjct: 72 VGGIHANDTYPADFIRDN----LLIATHVIDAAKNAGVKKLVFLGSSCIYPKLAPQPMRE 127
Query: 197 PPHVEGDV--------VKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKD------- 241
+ G + + AG + Y + + S P + G G+N
Sbjct: 128 DCLLTGPLESTNQWYAIAKIAGIKMCQAYRRQYGFSAISLMPTNLYGPGDNFTPVNSHVI 187
Query: 242 ---CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
+ R+ + V + G+G HV D++ + A I N+ S
Sbjct: 188 PGLMRRFHEARLAGSKQVAVWGTGNALREFLHVDDMARAAVACYLRYDDA--EIVNIGSG 245
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI----- 353
+ VT+ +A L A+ G EIV K G PR A DI
Sbjct: 246 QEVTIRELATLMAKITGYQGEIVFDASKPDG----------------TPRKALDIGRLRS 289
Query: 354 LGWRSTTNLPEDLKERFEEYV 374
LGW T +L L E + +
Sbjct: 290 LGWEPTFSLETGLAETYRWFC 310
>gi|163792518|ref|ZP_02186495.1| nucleotide sugar epimerase [alpha proteobacterium BAL199]
gi|159182223|gb|EDP66732.1| nucleotide sugar epimerase [alpha proteobacterium BAL199]
Length = 328
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 26/215 (12%)
Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS-NWASF------ 228
S G+K F++ SS+ +Y E P D V K +E S ++AS
Sbjct: 120 SRGLKHFVYASSSSVYGANREIPFSVDDRVDRPMSFYGATKRANEAMSYSYASLYGIPTT 179
Query: 229 --RPQYMIGSGNNKDCEEWFF-DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
R + G D W F DRI+ RP+ + G + ++ D+ + + A+++P
Sbjct: 180 GLRFFTVYGPWGRPDMSPWLFTDRILNGRPIEVFNHGQMRRDFTYIDDIVAGVVAALDHP 239
Query: 286 EAASSN-----IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRN 340
A S+ +NL ++ V L K+ A G P E++ K P
Sbjct: 240 PAGSAESPPIATYNLGNNSPVALLDYIKVIEAACGKPAELI----------MKPMQPGDV 289
Query: 341 MHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
+ YA+ A++ LG++ TT L E RF ++ K
Sbjct: 290 LETYADIEASRRDLGYQPTT-LIEVGIPRFVDWFK 323
>gi|300712100|ref|YP_003737914.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|448295790|ref|ZP_21485853.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|299125783|gb|ADJ16122.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|445583219|gb|ELY37551.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
Length = 328
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 117/298 (39%), Gaps = 40/298 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF---NRFNEIVSAGGKTVWGDP 141
GG IG + ELL +EVTI G+ + PF R N + AG + D
Sbjct: 8 GGTRFIGRHTVTELLDHDYEVTIFNRGNHEN------PFAEEERVNHV--AGDRN---DQ 56
Query: 142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE 201
+ + D+V+D + VR + + +++++SS Y A+ P E
Sbjct: 57 TALEAAAVSIAPDLVIDCVAYRPEQVRRATEAFADA---RYVYVSSGSSYG-AEHVPKRE 112
Query: 202 GDVVKPDAGHVQVEKYISENFS------------------NWASFRPQYMIGSGNNKDCE 243
G+ Q E + + + RP + G + +
Sbjct: 113 GETPLEPCSAEQASDDSPETYGARKAEGDRAVMEAADRGIDAMALRPCIVYGPHDYTERL 172
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
+++ DR++ V +PG G + +V D++S L + E+ +N+ R +TL
Sbjct: 173 DYWIDRVLTHDRVVVPGDGQHLWHRVYVEDVASALRVVGES--GVPGEAYNVGDRRLLTL 230
Query: 304 DGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRST 359
+ A+ AG V++V + AAG + + FP + + A LGW ST
Sbjct: 231 RETLETIAEVAGTAVDVVTAGERELAAGGLSSEEFPLYREYPHVMSTATLTDLGWDST 288
>gi|334132694|ref|ZP_08506450.1| UDP-glucose 4-epimerase [Methyloversatilis universalis FAM5]
gi|333442178|gb|EGK70149.1| UDP-glucose 4-epimerase [Methyloversatilis universalis FAM5]
Length = 316
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 23/167 (13%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ--------V 214
N+D R +A+ A ++GV++FLFISS G+ P + P E D P + + +
Sbjct: 94 NVDGTRRLAEQAAAAGVRRFLFISSIGVNGPRADRPFTEDDRPAPQGSYAESKLEAETAL 153
Query: 215 EKYISENFSNWASFRPQYMIG---SGNNKDCEEWFFDRIVR--KRPVPIP-GSGMQFTNI 268
+ W RP + G GN F R+VR R VP+P G+ +
Sbjct: 154 REVCGRTGMEWVVIRPPLVYGPHAPGN--------FARLVRWMARGVPLPLGAVHNRRTL 205
Query: 269 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG 315
+ +L ++ + + EAA+ +F +++ + + AQA G
Sbjct: 206 VAIDNLVDLIVTCLHS-EAAAGQLFLAGDGESLSTPELLRTVAQARG 251
>gi|331267149|ref|YP_004326779.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Streptococcus oralis
Uo5]
gi|326683821|emb|CBZ01439.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Streptococcus
oralis Uo5]
Length = 326
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 138/351 (39%), Gaps = 77/351 (21%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGD--ENS-------DKMKKP 121
KKVL+ +G +G Y+ +EL G++V G ENS D K+
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQQGYQVRAFGRNRKAGQSLENSLVSFFQGDLTKQE 57
Query: 122 PFNR----FNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
R + IV AG TVWG +D N+ + V D +
Sbjct: 58 DLARACQGMDMIVHAGALSTVWGP---------------WVDFYQTNVLGTKYVLDACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P D+ E + + + YI ++ F
Sbjct: 103 TGIQRLVYVSSPSIYAAPRDQLAIKESAAPQEN----NLNNYIRSKLASEKLFKDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 159 SIILRPRGIFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAFPFRNMHF 343
P+ AS ++N+ + + + + G P+ P + I + F ++ +H
Sbjct: 217 PQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPITYRKVPAPLLSAIASTLEFIYKILHL 275
Query: 344 YAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 375
EP +A +D LG+R ++ E +++ +Y K
Sbjct: 276 KGEPPLTRYTYYLLRYSQTLDISKAERD-LGYRPQISISEGIEQYVRDYRK 325
>gi|378953138|ref|YP_005210626.1| UDP-glucose 4-epimerase [Pseudomonas fluorescens F113]
gi|359763152|gb|AEV65231.1| UDP-glucose 4-epimerase [Pseudomonas fluorescens F113]
Length = 309
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 111/280 (39%), Gaps = 47/280 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG +L LL GH V I+ D ++ K P + N V + + GD A+
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILD--DLSTGKRSNLPLD--NPAV----ELIEGDVAD 60
Query: 144 VGNVVGGVT-----------------FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
V +T D + + N V + + SGVK+ LF S
Sbjct: 61 AALVARAMTGCSAVAHLAAVASVQASVDDPVRTHQSNFIGTLNVCEAMRQSGVKRVLFAS 120
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------G 237
SA +Y E ++ + K +K SE + ++ +R Q+ + G
Sbjct: 121 SAAVYGNNGEGESIDEETPKAPLTPYASDKLASEFYFDF--YRRQHDLEPVVFRFFNIYG 178
Query: 238 NNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
+D F +R + P+ + G G Q + +V DL +L A+E PE
Sbjct: 179 PRQDPSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFVYVEDLVDLLVQAIEKPEVEVG 238
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+ N+ ++A TL M + A G LP + Y P +G
Sbjct: 239 AV-NVGWNQATTLKQMLQALAAVVGDLPP--ISYGPARSG 275
>gi|222481362|ref|YP_002567598.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC
49239]
gi|222454738|gb|ACM59001.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC
49239]
Length = 315
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 80/196 (40%), Gaps = 18/196 (9%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD--------AGHVQV 214
N+ A + D A +G + +F SSA +Y P E D P AG V
Sbjct: 106 NVSATADLLDLATDAGAR-VVFASSAAVYGDPSSVPIGETDAKDPREPYGVSKLAGDHLV 164
Query: 215 EKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL 274
Y + + R + G G F +++ R P+ + G G Q + HV D+
Sbjct: 165 RGYADWKDLDTVALRLFNVYGPGQTGGVVPSFLEQVQRGEPLVVHGDGTQTRDFVHVDDV 224
Query: 275 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI---- 330
+ A A+ FN+ + ++ +A + AA + V++VH DP+ A +
Sbjct: 225 VRAMVAAARTD--ATGESFNVGTGDVTSIHELATVVRDAAPVTVDVVHDDPRPADVPESQ 282
Query: 331 -DAKKAFPFRNMHFYA 345
D KA R++ F A
Sbjct: 283 ADTTKA--RRDLEFEA 296
>gi|187779689|ref|ZP_02996162.1| hypothetical protein CLOSPO_03285 [Clostridium sporogenes ATCC
15579]
gi|187773314|gb|EDU37116.1| NAD dependent epimerase/dehydratase family protein [Clostridium
sporogenes ATCC 15579]
Length = 728
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 143/342 (41%), Gaps = 58/342 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK----KPPFNRFN------EIVSAG 133
+GG+ IG ++ + G+EV I + + +S K++ K F F+ E V
Sbjct: 6 TGGYGFIGSHVVERFAKEGYEVFI--IDNMSSGKLENVNCKHKFYEFDVEDKRCEFVFKN 63
Query: 134 GK--TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
V A++ NV+ + D LD N+ + + + + VK+F+F SSA IY
Sbjct: 64 NNFDIVVHLAAQI-NVITSLE-DPFLDTK-TNILGLVNMLELSTKYKVKKFIFASSAAIY 120
Query: 192 KPADEPPHVEGDVVKPDAGHVQVEKYISENFS-NW--------ASFR-------PQYMIG 235
+ P E ++ +P + + + KY+ E + W FR Q +IG
Sbjct: 121 GNNENIPLTEKEIAEPLSPY-GISKYVGEGYCKKWNEIYSLDTICFRFSNVYGPRQGIIG 179
Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
G F D I + + + + G G Q + +V DL+ L A E+ S ++NL
Sbjct: 180 EGG---VVSIFMDNITKDQEITLNGDGEQTRDFIYVSDLTDALFKAAESN--ISFGVYNL 234
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILG 355
++ +L+ + K+ + I D K D K H + K LG
Sbjct: 235 STNSRSSLNNLIKILNNLKKIKGIIKKEDRKG---DIK--------HSSLDNTKIKKALG 283
Query: 356 WRSTTNLPEDLKERFEEY---VKI---GRDKKAMQFEIDDKI 391
W +L + +K F+ Y K+ +KK +++ DDKI
Sbjct: 284 WIPMVSLEQGIKNTFDWYSTNYKVEENNTEKKKLKY--DDKI 323
>gi|423097596|ref|ZP_17085392.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas
fluorescens Q2-87]
gi|397885474|gb|EJL01957.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas
fluorescens Q2-87]
Length = 309
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 110/278 (39%), Gaps = 43/278 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF-NRFNEIVSAGGKTVWGDPA 142
+GG IG +L LL GH V I+ D ++ K P N E++ D A
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILD--DLSTGKRSNLPLDNPAVELIEGD----VADAA 62
Query: 143 EVGNVVGGVT--------------FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA 188
V V+ G + D + + N V + + GVK+ LF SSA
Sbjct: 63 LVARVMSGCSAVAHLAAVASVQASVDDPVRTHQSNFIGTLNVCEAMRQVGVKRVLFASSA 122
Query: 189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIG---------SGNN 239
+Y E ++ + K +K SE + ++ +R Q+ + G
Sbjct: 123 AVYGNNGEGQSIDEETPKAPLTPYASDKLASEFYLDF--YRRQHALEPVVFRFFNIYGPR 180
Query: 240 KD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+D F +R + P+ + G G Q + +V DL +L A++ PE +
Sbjct: 181 QDPSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFVYVEDLVDLLVQAIKKPEVEVGAV 240
Query: 293 FNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
N+ ++A TL M K A+ G LP + Y P +G
Sbjct: 241 -NVGWNQATTLKQMLKALAEVVGDLPP--ISYGPARSG 275
>gi|389793504|ref|ZP_10196667.1| NAD-dependent epimerase/dehydratase [Rhodanobacter fulvus Jip2]
gi|388433718|gb|EIL90678.1| NAD-dependent epimerase/dehydratase [Rhodanobacter fulvus Jip2]
Length = 308
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 87/210 (41%), Gaps = 29/210 (13%)
Query: 182 FLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYISENF-SNWAS--------FRPQ 231
L++SS G +Y P E ++P + H K SE F + W S RP
Sbjct: 109 LLYMSSGGSLYADTTTQPSSESARLQPRSYH-GATKLASETFIAAWCSQSGGKATILRPS 167
Query: 232 YMIGSGNNKDCEEWF------FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
+ G G + + F F ++R + + G G + ++ DL + L + NP
Sbjct: 168 NVYGPGQPE--RKGFGVIPAAFGTMLRGETLHVWGDGSAQRDYVYIDDLVELCALVLTNP 225
Query: 286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 345
A + FN S +V+L+ + + AG P++ Y+P A +DA
Sbjct: 226 MPAGARTFNACSGTSVSLNELFGIMESVAGQPLQ-RSYEPGRA-VDASC--------IAM 275
Query: 346 EPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
+P A GW T+L L++ +E + +
Sbjct: 276 DPTLAAQAHGWHHRTSLEAGLRQTWERFRR 305
>gi|407366592|ref|ZP_11113124.1| NAD-dependent epimerase/dehydratase [Pseudomonas mandelii JR-1]
Length = 310
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 117/289 (40%), Gaps = 28/289 (9%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG----GKTVWG 139
+GG IG +L + LLG G++V ++ + ++ K+ P + N + G G V
Sbjct: 9 TGGAGFIGSHLVEALLGKGYKVRVLD--NLSTGKVSNLPMDNANLNLVIGDVADGAVVAQ 66
Query: 140 DPAEVGNVVG-------GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
+ G VV + D + + N V + +G+K+ +F SSA IY
Sbjct: 67 AMRDCGAVVHLAAVASVQASVDDPVSTHQSNFVGTLNVCESMVKAGIKRVVFASSAAIYG 126
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS---------FRPQYMIG-----SGN 238
E + D K +K SE + ++ FR + G S
Sbjct: 127 NNGEGTAIHEDTPKSPLTPYASDKLASEQYLDFYRREHGLEPMIFRFFNIFGPRQDPSSP 186
Query: 239 NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
F + ++ V I G G Q + +V+DL S+L ++E E + + N+
Sbjct: 187 YSGVISIFTKLALAEQSVAIFGDGSQTRDFVYVQDLVSILVQSLEVSEPSPGAV-NVGLS 245
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 347
R+ +L+ + G P++++H+ P+ I +A R + + P
Sbjct: 246 RSTSLNDLIAELGTVTGSPLKVIHHAPRQGDIRHSRANNSRLLERFKLP 294
>gi|226229173|ref|YP_002763279.1| NAD-dependent epimerase/dehydratase family protein [Gemmatimonas
aurantiaca T-27]
gi|226092364|dbj|BAH40809.1| NAD-dependent epimerase/dehydratase family protein [Gemmatimonas
aurantiaca T-27]
Length = 339
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 97/238 (40%), Gaps = 42/238 (17%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP-AE 143
GG IG +L + L GH +T+ N + K F + +++ GD A
Sbjct: 7 GGTGFIGPHLVEYALSRGHTLTLF-----NRGRTKPGLFPKAEQLI--------GDRNAP 53
Query: 144 VGNV-VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK---------- 192
G+ + G T+DVV D V A K V Q++++SS YK
Sbjct: 54 DGHAALAGRTWDVVFDLPATTPQWVVNAAAVLKGK-VDQYVYVSSTAAYKDFARSFPDET 112
Query: 193 -PADEPPHVEGDVVKPDAG-------HVQVEKYISENFSNWASF-RPQYMIGSGNNKDCE 243
P +P + G PDA V+ E+ + E F N A+ RP ++G G+ D
Sbjct: 113 HPTQDPAPITG----PDAAAAPFGNKKVRCEQLVQEAFGNGATIVRPGLIVGPGDLTDRF 168
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
++ RI + V PG RDL+ + VE+ ++ +FN V R V
Sbjct: 169 TYWPVRIEKGGEVLAPGKLEDPAQWIDARDLAEWMVRMVES---RTTGVFNAVGPRTV 223
>gi|398879871|ref|ZP_10634952.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM67]
gi|398195189|gb|EJM82240.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM67]
Length = 309
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 111/277 (40%), Gaps = 41/277 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIV---------- 130
+GG IG +L LL GH V I+ + G ++ + P R IV
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILDDLSTGKRSNLALDNP---RVELIVGDVADAALVA 65
Query: 131 -SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
+ G + A V +V V D + + N V + + SGVK+ LF SSA
Sbjct: 66 RAMAGCSAVAHLAAVASVQASV--DDPVKTHQSNFIGSLNVCEAMRQSGVKRVLFASSAA 123
Query: 190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNK 240
+Y E ++ D K +K SE++ ++ +R Q+ + G +
Sbjct: 124 VYGNNGEGQSIDEDTPKEPLTPYASDKLASEHYFDF--YRRQHALEPVIFRFFNIFGPRQ 181
Query: 241 D-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
D F +R P+ + G G Q + +V DL +L A+E P+ +
Sbjct: 182 DPSSPYSGVISIFSERAQNGLPITVFGDGEQTRDFVYVEDLVDVLVQAIEKPQVEVGAV- 240
Query: 294 NLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
N+ ++A TL M + A G LP V Y P +G
Sbjct: 241 NVGWNQATTLKQMLEALKVAVGELPP--VSYGPARSG 275
>gi|229103665|ref|ZP_04234346.1| NAD-dependent epimerase/dehydratase [Bacillus cereus Rock3-28]
gi|228679787|gb|EEL33983.1| NAD-dependent epimerase/dehydratase [Bacillus cereus Rock3-28]
Length = 341
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 121/294 (41%), Gaps = 51/294 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG--DENSDKMKKPPFNRFNEIVSAG 133
K+LI+ GG +G +E L GHEVT+ G E ++KK +R N++ S
Sbjct: 2 KILIL----GGTRFLGRAFVEEALKRGHEVTLFNRGSNKELFPEVKKLIGDRNNDVSSLE 57
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
+ +DVV+D G + +R V + VKQ++FISS +YK
Sbjct: 58 NRK----------------WDVVIDTCGFSPHHIRNVGE-VLQDNVKQYIFISSLSVYKD 100
Query: 194 ADEPPHVEGD-VVKPDAGHVQVEKYISENFSNWASF----------------------RP 230
P H++ D +++P+ +++ + S + + R
Sbjct: 101 WI-PHHIKEDYILQPEPTSDRIKAVENGEISPYEHYGALKVLCEKEAEKYWPGRVLHVRA 159
Query: 231 QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
+ G+ + D ++ R+ + V +PG + + ++D++S EN +A +
Sbjct: 160 GLLSGTFDYTDRLPYWIQRVAKGGKVLVPGRKDRPVQLVDIKDVASFGLNMAENNKAGTF 219
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFY 344
NI + +T++ + C + E V D + + KA P+ M +
Sbjct: 220 NITG--PNDELTMEELLNTCKRVTNSDAEFVWVD--ESFMKEHKAQPWTEMPLW 269
>gi|111221487|ref|YP_712281.1| hypothetical protein FRAAL2051 [Frankia alni ACN14a]
gi|111149019|emb|CAJ60700.1| hypothetical protein; putative SAM domain [Frankia alni ACN14a]
Length = 595
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 13/130 (10%)
Query: 175 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI 234
+++G+++ +F+S+ GI+ D P + E I + W RP +
Sbjct: 89 RAAGIRRAVFLSTTGIFTALDPPSKRV---------RIAAEHTIETSGLEWTIIRPTMIY 139
Query: 235 GSGNNKDCEEWFFDRIVRKRPV-PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
G ++++ +VR+ PV P+PG G + HV DL++ + A+ + +AA +
Sbjct: 140 GGSDDRNMARLLA--LVRRVPVLPLPGGGRRLHQPVHVDDLAATVLRAL-SADAAVGRGY 196
Query: 294 NLVSDRAVTL 303
++ RA++L
Sbjct: 197 DVAGPRALSL 206
>gi|289772061|ref|ZP_06531439.1| reductase [Streptomyces lividans TK24]
gi|289702260|gb|EFD69689.1| reductase [Streptomyces lividans TK24]
Length = 344
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 109/274 (39%), Gaps = 38/274 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G + + LG G EVT++ G + PP R G +T P +
Sbjct: 7 GGTEFVGRSVVEAALGRGWEVTVLHRG-----RHAPPPGARALH----GDRTA---PDGL 54
Query: 145 GNVVGGV-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP------ADEP 197
+ G T+D V+D AVR A + +++++SS +Y A++
Sbjct: 55 TALTGAEDTWDAVVDTWSAAPRAVRDAARLLRQR-AGRYVYVSSCSVYAWAPPAGYAEDA 113
Query: 198 PHVEGDVVKPDAGHVQ-------VEKYISENFSNWAS--FRPQYMIGSGNNKDCEEWFFD 248
P VEG DAG E + + F S R ++G N W+ +
Sbjct: 114 PLVEG--ASADAGQRDYARDKRGAELAVLDAFGADRSVLVRAGLILGPYENVGRLPWWLN 171
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA-VTLDGMA 307
R+ R PV PG VRDL+ + AVE S +NLVS T+ G+
Sbjct: 172 RLARGGPVLAPGPRDLPLQYIDVRDLADWVLGAVER---ELSGPYNLVSPPGHTTMGGLL 228
Query: 308 KLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPF 338
+ CA G E+ P+ AAGI+ P
Sbjct: 229 EACATVTGGTAELRWTSPETVLAAGIEPWVQLPV 262
>gi|228912108|ref|ZP_04075826.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis IBL
200]
gi|228847535|gb|EEM92471.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis IBL
200]
Length = 307
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 112/273 (41%), Gaps = 25/273 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG ++ KELL G+EV I DK K F EI T+ + +V
Sbjct: 7 GGSGFIGKHVTKELLARGYEVVIF-------DKFKPSIDVPFKEIDILDIATLRENLIDV 59
Query: 145 GNVVGGVTFDVVLDN---NGK-----NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE 196
V+ V +DN N + N + + + +G+++ LF SS+ +Y
Sbjct: 60 DGVIHLAAL-VGVDNCRLNEEDVVRVNFEGTKNIVQVCTENGIEKLLFSSSSEVYGDGVS 118
Query: 197 PPHVEGDVVKPDAGH----VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
P E D+ P + + + E Y+ E SN R ++ + + + ++
Sbjct: 119 VPFKENDIKIPKSAYGKAKLMSEDYLKEYVSNSLKIRVVRYFNVYGSQQNDNFVISKFLK 178
Query: 253 K----RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
+ + + I G G Q +++ D+ + LA E E + FN+ +++ ++++ +A
Sbjct: 179 QAHSGKDITIYGDGQQIRCFSYISDIVNGTILAFE-YEGENFADFNIGNNKPISMEELAI 237
Query: 309 LCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
+ G +I D G+ FR +
Sbjct: 238 KINELMGNKSKIKFLDLGEEGVRNSSIEIFRRI 270
>gi|410939482|ref|ZP_11371309.1| NADH(P)-binding protein, PF13460 family [Leptospira noguchii str.
2006001870]
gi|410785350|gb|EKR74314.1| NADH(P)-binding protein, PF13460 family [Leptospira noguchii str.
2006001870]
Length = 330
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 135/312 (43%), Gaps = 41/312 (13%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-FNRFNEIV---SAGGKTVWG 139
+GG +G L LL G++VT++ + D +K+ P + + +T+ G
Sbjct: 11 TGGAGYVGAMLVPRLLSEGYKVTVLDLMIYGKDVLKEHPNLTKIQGDIRDQDVLNQTIPG 70
Query: 140 DPAEVGNVVGGVTFDVVLDNN---GK--NLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
+ + + ++ D + N GK NLDA RP+ + +K VK+F++ SS+ +Y
Sbjct: 71 HDSVIH--LACISNDPSFELNPNLGKSINLDAFRPLVEISKKHAVKRFIYASSSSVYGIK 128
Query: 195 DEPPHVEGDVVKPDAGHVQ--------VEKYISENFSNWASFRPQYMIGSGNNKDCE--- 243
DEP E ++P + + + +Y++++F+ + RP + G + +
Sbjct: 129 DEPNVTEDFSLEPLTDYSKFKADCEKILNEYLTDDFT-PVTIRPATVCGYSPRQRLDVVV 187
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSDRAVT 302
+ KR + + G NI H+ D+ + + P E + I+N T
Sbjct: 188 NILTNLAYHKREISVFGGAQLRPNI-HIDDMVDAYLVLLRAPKEKVAGEIYN-AGYLNFT 245
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNL 362
+ +A + + G V++V + +++ + Y + LG+R+ ++
Sbjct: 246 VSEIANMVKEVVGEDVKLV-----TTPTNDNRSYHISSDKIYNQ-------LGFRANRSI 293
Query: 363 P---EDLKERFE 371
EDLK+ F+
Sbjct: 294 KLAAEDLKKAFD 305
>gi|417940628|ref|ZP_12583916.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK313]
gi|343389509|gb|EGV02094.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK313]
Length = 326
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 136/350 (38%), Gaps = 75/350 (21%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-------------TVGDENSDKMKKP 121
KKVL+ +G +G Y+ +EL S ++V TV D K+
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQSSYQVRAFGRNRKMGQSLETSTVAFFQGDLTKQE 57
Query: 122 PF----NRFNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ +V AG TVWG P E D N+ + V D +
Sbjct: 58 DLAQACQEMDMVVHAGALSTVWG-PWE--------------DFYQTNVLGTKYVLDACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P D+ E D + + + YI ++ F
Sbjct: 103 AGIQRLVYVSSPSIYAAPRDQLAIKESDAPQEN----NLNNYIRSKLASEKLFKDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 159 SIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAFPFRNMHF 343
P+ AS ++N+ + + + + G P+ P + I + F ++ +
Sbjct: 217 PQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPITYRKVPAPLISVIASSLEFLYKTLKL 275
Query: 344 YAEPRAAK------------DI------LGWRSTTNLPEDLKERFEEYVK 375
EP + DI LG+R ++ E +++ ++Y K
Sbjct: 276 KGEPALTRYTYYLLRYSQTLDISKAELDLGYRPQISISEGIEQYVQDYRK 325
>gi|325289029|ref|YP_004265210.1| sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating)
[Syntrophobotulus glycolicus DSM 8271]
gi|324964430|gb|ADY55209.1| Sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating)
[Syntrophobotulus glycolicus DSM 8271]
Length = 329
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 101/259 (38%), Gaps = 41/259 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-----W 138
+G IG L +ELL SG+ V + M+KP + N ++ GGK
Sbjct: 6 TGATGFIGARLVEELLDSGYRVRVF---------MRKPIEHYPN--MAWGGKVTAAVGDL 54
Query: 139 GDPAEVGNVVGGVTFDVVL--------------DNNGKNLDAVRPVADWAKSSGVKQFLF 184
D + V GV DVV+ D N + + + ++ +G+K FL+
Sbjct: 55 KDRDSIKKAVQGV--DVVVHLAAQLGSWRAKQEDFTEVNDNGTKFFVEESEMAGIKHFLY 112
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGHVQV----EKYISENFSNW---ASFRPQYMIGSG 237
IS+AG++ + P E P + Q E+YIS+ RP ++ G G
Sbjct: 113 ISTAGVFGRLKQIPADETHPCSPRYPYEQTKFRAEQYISQKIREGFPATIIRPSHIYGPG 172
Query: 238 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
+ +++ P+ G G F ++ DL L L + + ++ L
Sbjct: 173 DLNMVP--LLKILLKFHLFPLIGGGKSFFQPLYIDDLLKGLILVIGHRNTVCGKLYVLAG 230
Query: 298 DRAVTLDGMAKLCAQAAGL 316
A T +L A+ G+
Sbjct: 231 KEATTFRQYIQLSAKLMGI 249
>gi|262195081|ref|YP_003266290.1| NAD-dependent epimerase/dehydratase [Haliangium ochraceum DSM
14365]
gi|262078428|gb|ACY14397.1| NAD-dependent epimerase/dehydratase [Haliangium ochraceum DSM
14365]
Length = 331
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 92/225 (40%), Gaps = 31/225 (13%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP-------DAGHVQVE 215
N V ++A+ GV + + SSA +Y +E P E +P G Q+
Sbjct: 109 NYAGTAQVLEYARHRGVAKVVLASSAAVYGDTEELPVRETLPTRPLSPYGANKLGSEQLL 168
Query: 216 KYISENFSNWASFRPQYMIGSGNNKDCEE-------WFFDRIVRKRPVPIPGSGMQFTNI 268
Y S + ++ G +D + F DR + +P+ I G G Q +
Sbjct: 169 YYYSA-VHGVGTTALRFFNVYGPRQDPKSPYSGVISIFADRAMAGKPLTIFGDGEQTRDF 227
Query: 269 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK----LCAQAAGLP-VEIVHY 323
+V D+S + A E + I N+ + T++ +A+ LC +AAG P V I H
Sbjct: 228 VYVGDVSRAVAQACLGDEGDRA-IINIGTGSETTVNELARTIVSLCGEAAGAPEVAISHS 286
Query: 324 DPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 368
D + I A+ M +DILG R+ T L L+E
Sbjct: 287 DARPGEI-ARSVAAVERM---------RDILGLRAETELAAGLRE 321
>gi|440795762|gb|ELR16878.1| NAD dependent epimerase/dehydratase [Acanthamoeba castellanii str.
Neff]
Length = 385
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 136/335 (40%), Gaps = 54/335 (16%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI---------MTVGDENSDKMKKPPFN 124
+KKV+++ +G ++A+ LLG G +V I +T+ ++N + +
Sbjct: 67 RKKVVLLTGGAG-------FIARFLLGRGDDVIIVDEVNDYYDITIKEDNLAFLSSFAKH 119
Query: 125 RFNEIVSAGGKTVWG----DPAEVGNVV-----GGVTF-----DVVLDNNGKNLDAVRPV 170
R + AG + ++ D A + ++ GV + DV + +N L +
Sbjct: 120 RLDIADRAGMRAIFDQAQTDGAPITHICHLAARAGVRYSIENPDVYIHSN---LQGTLVM 176
Query: 171 ADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK----PDAGHVQVEKYISENFSN-- 224
D A+ V F+F SS+ +Y + P E D V P A + + +++ +++
Sbjct: 177 LDMARDYTVTNFVFASSSSVYGENKKVPFAETDRVDNPVSPYAATKRACELLAKTYNHLY 236
Query: 225 ---WASFRPQYMIGSGNNKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
+ R + G D + F D I +P+ G G + V D+ +
Sbjct: 237 GIPMSGLRFFTVYGPRGRPDMAPYKFIDAIYNGKPINKFGDGTTSRDYTFVSDVVQGIVA 296
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRN 340
++ P A +FNL + R + L+ ++ A G I H P+ +
Sbjct: 297 TIDMP-FAELQLFNLGNSRTINLNRFIEVVEAAVGKKAVINHMPPQPGDVPIT------- 348
Query: 341 MHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
+A+ R +K +LG+ + E +K E Y++
Sbjct: 349 ---FADLRKSKQLLGYDPQVPIEEGIKRMAEWYIE 380
>gi|398838659|ref|ZP_10595933.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM102]
gi|398115530|gb|EJM05312.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM102]
Length = 309
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 111/276 (40%), Gaps = 39/276 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF-NRFNEIVSAG--------- 133
+GG IG +L LL GH V I+ D ++ K P N E++
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILD--DLSTGKRSNLPLENPLVELIVGDVADAALVAQ 66
Query: 134 ---GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
G + A V +V V D + + N V + + +GVK+ LF SSA +
Sbjct: 67 AMVGCSAVAHLAAVASVQASV--DDPVKTHQSNFIGSLNVCEAMRQTGVKRVLFASSAAV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD 241
Y E ++ D K +K SE++ ++ +R Q+ + G +D
Sbjct: 125 YGNNGEGESIDEDTPKAPLTPYAADKLASEHYFDF--YRRQHDLEPVVFRFFNIFGPRQD 182
Query: 242 -------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
F +R + P+ + G G Q + +V DL +L A+E P+ + N
Sbjct: 183 PSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFVYVEDLVDVLVQAIEKPQVEVGAV-N 241
Query: 295 LVSDRAVTLDGM-AKLCAQAAGLPVEIVHYDPKAAG 329
+ ++A TL M A L A LP V Y P +G
Sbjct: 242 VGWNQATTLKQMLAALEAVVGKLPP--VSYGPARSG 275
>gi|188591883|ref|YP_001796481.1| GDP fucose synthetase [Cupriavidus taiwanensis LMG 19424]
gi|170938257|emb|CAP63242.1| GDP-L-fucose synthetase;
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase
[Cupriavidus taiwanensis LMG 19424]
Length = 330
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 96/244 (39%), Gaps = 39/244 (15%)
Query: 162 KNLDAVRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 208
+NL V A +GV+Q LF+ S+ IY +P E + G + +
Sbjct: 87 QNLAIATNVIHAAWQAGVRQLLFLGSSCIYPRLAPQPICEASLLTGALEPTNAPYAIAKI 146
Query: 209 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE---------EWFFD-RIVRKRPVPI 258
AG + + Y + +++ P + G G+N + F D R+ VP+
Sbjct: 147 AGIMLCDSYNRQYGTDYRCVMPTNLYGPGDNYHPDNSHVIPGLVRRFHDARLAGSARVPV 206
Query: 259 PGSGMQFTNIAHVRDL--SSMLTLAVENP---EAASSNIFNLVSDRAVTLDGMAKLCAQA 313
G+G H DL + + +A+ P EAA + N+ SD V++ +A L AQ
Sbjct: 207 WGTGKPLREFLHADDLARACLHVMALSTPAYREAAPAGFLNVGSDDEVSIGALAALVAQV 266
Query: 314 AGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 373
G I K G P + + A R GWR L + L+ +EE
Sbjct: 267 TGYRGTIAFEADKPDGT------PRKRLDSSAIMRT-----GWRPRIALHDGLRGVYEEA 315
Query: 374 VKIG 377
+ G
Sbjct: 316 CRTG 319
>gi|340617983|ref|YP_004736436.1| NAD(P)-dependent sugar epimerase/dehydratase [Zobellia
galactanivorans]
gi|339732780|emb|CAZ96080.1| NAD(P)-dependent sugar epimerase/dehydratase [Zobellia
galactanivorans]
Length = 334
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 16/145 (11%)
Query: 237 GNNKDCEEW------FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
G N++ W F D I++ + +PI G GMQ V D + + A PE A+
Sbjct: 184 GPNQNLSWWGGPQSVFIDCILKNKEIPIHGDGMQTRTFTFVDDTVAGIYAATMKPE-ANG 242
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLP----VEIVHYDPKAAGIDAKKAFPFRNMHFYAE 346
IFN+ +++ +T+ +A + + + P ++++ Y+ +AG + M +
Sbjct: 243 EIFNIGANQEITIIELANMLKRISNEPRTPEIKLIPYNEISAGRKYQDV-----MRRVPD 297
Query: 347 PRAAKDILGWRSTTNLPEDLKERFE 371
A+ ILG ++ T+L E L+ F+
Sbjct: 298 TTKAEKILGIKAQTSLEEGLRITFD 322
>gi|426411737|ref|YP_007031836.1| NAD-dependent epimerase/dehydratase [Pseudomonas sp. UW4]
gi|426269954|gb|AFY22031.1| NAD-dependent epimerase/dehydratase [Pseudomonas sp. UW4]
Length = 309
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 110/276 (39%), Gaps = 39/276 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF-NRFNEIVSAGGK------- 135
+GG IG +L LL GH V I+ D ++ K P N E++
Sbjct: 9 TGGAGFIGSHLTDALLAKGHAVRILD--DLSTGKRSNLPLDNPKVELIVGDVADAAVVAQ 66
Query: 136 -----TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ A V +V V D + + N V + + +GVK+ LF SSA +
Sbjct: 67 AMAGCSAVAHLAAVASVQASV--DDPVRTHQSNFIGTLNVCEAMRQAGVKRVLFASSAAV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD 241
Y E ++ D K V+K SE + ++ +R Q+ + G +D
Sbjct: 125 YGNNGEGESIDEDTPKAPLTPYAVDKLASEQYFDF--YRRQHALEPVIFRFFNIFGPRQD 182
Query: 242 -------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
F +R ++ P+ + G G Q + +V DL +L A+E P A + N
Sbjct: 183 PSSPYSGVISIFSERALKGLPITVFGDGEQTRDFVYVEDLVDLLVQAIEKPGAEVGAV-N 241
Query: 295 LVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+ ++A TL M + G LP V Y P +G
Sbjct: 242 VGWNQATTLKQMLEALEAVVGQLPP--VSYGPARSG 275
>gi|288961614|ref|YP_003451924.1| UDP-glucose 4-epimerase [Azospirillum sp. B510]
gi|288913894|dbj|BAI75380.1| UDP-glucose 4-epimerase [Azospirillum sp. B510]
Length = 314
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 111/294 (37%), Gaps = 68/294 (23%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--- 140
+GG IG +LA LL GH VTI+ + +S ++ P G K V GD
Sbjct: 7 TGGCGFIGSHLADRLLADGHRVTILD--NLSSGSLQNKPH---------GAKLVVGDVAD 55
Query: 141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVAD----------WAKSSGVKQF-------- 182
PA V + G + G+ +D V +A WA++
Sbjct: 56 PAAVREAMAG--------DAGEGVDGVFHLAAVASVQKSRELWAETHRTNLLGTVTVFEA 107
Query: 183 ------------LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN--WA-- 226
++ SSA IY P E + +P + + V+K E WA
Sbjct: 108 ARNAKGGHPVPVVYASSAAIYGDNTNTPLREDEPPRPLSAY-GVDKLGCEMHGRVAWAIQ 166
Query: 227 -----SFRPQYMIGSGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 276
FR + G + F R+ R V I G G Q + V D+
Sbjct: 167 GVPTVGFRFFNVYGPRQDPMSPYSGVISIFARRVARGEDVEIHGDGQQVRDFVFVGDVVR 226
Query: 277 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 330
+L LA+E A + +FNL + RA +L + ++ + G V H +P+A I
Sbjct: 227 ILALAMER-RFAGAQLFNLCTGRATSLVMLLEVLQELCGSKVRRRHTEPRAGDI 279
>gi|148272012|ref|YP_001221573.1| putative nucleotide sugar epimerase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147829942|emb|CAN00867.1| putative nucleotide sugar epimerase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 347
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 23/250 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG I + + +G +VT++ G + K + P + DP+ +
Sbjct: 14 GGTGTISAACVRASVAAGMDVTVVNRGADA--KGRGAPEGVTTRVADVT------DPSAL 65
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG-VKQFLFISSAGIY-KPADEPPHVEG 202
+G TFD V+D + DA +G +QF+ ISSA IY KPA + P E
Sbjct: 66 LAAIGDRTFDAVVDF--LSFDAAGADGRVELFAGRARQFVAISSASIYRKPALQTPITES 123
Query: 203 DV-VKPDAGHVQVEKYISENFSNWAS--------FRPQYMIGSGNNKDCEEW-FFDRIVR 252
+ P + + + + + F + RP + + +W DRI R
Sbjct: 124 TLRANPFLSYARDKIAMEDAFLRHHAASGFPVVIVRPSHTYDEASPPLAGDWTVVDRIAR 183
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
V +PG G + H D + L + + E A ++ SD T D + L A
Sbjct: 184 GDEVVVPGDGTSLWTLTHADDFAVGL-VGILGDERAVGEALHITSDDVSTWDRIHHLVAD 242
Query: 313 AAGLPVEIVH 322
A G+ +VH
Sbjct: 243 ALGVEARLVH 252
>gi|429195815|ref|ZP_19187815.1| NAD-binding protein [Streptomyces ipomoeae 91-03]
gi|428668472|gb|EKX67495.1| NAD-binding protein [Streptomyces ipomoeae 91-03]
Length = 310
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 21/204 (10%)
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF---------SNWASF 228
G + LF S++ IY E V +P + + + K +SE+
Sbjct: 99 GAEHLLFCSTSEIYGDGTGRVLSEDAVARPHSLYGRA-KLLSESVVAEFARSPGRRATVV 157
Query: 229 RPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-- 285
RP + G G D F + R P+ + G G Q +V DL++ + A+ P
Sbjct: 158 RPFNVYGPGQRPDFVVSRFVELASRGEPLTVHGDGAQIRTFTYVDDLAAGMWAALCRPAS 217
Query: 286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 345
E A I+NL S + ++ + ++ AG +V P AG DA + R
Sbjct: 218 EGAPFEIYNLASQQTFSITEVVEMVNDLAGSDSPVVRISPGEAGRDAAQEVTVRI----- 272
Query: 346 EPRAAK--DILGWRSTTNLPEDLK 367
P AAK + LG+R++ L E ++
Sbjct: 273 -PSAAKAEEHLGFRASVTLSEGIR 295
>gi|55377093|ref|YP_134943.1| hypothetical protein rrnAC0171 [Haloarcula marismortui ATCC 43049]
gi|55229818|gb|AAV45237.1| unknown [Haloarcula marismortui ATCC 43049]
Length = 359
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 116/298 (38%), Gaps = 40/298 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + E +G++VT++T G ++ PF E+ G D E
Sbjct: 40 GGGRFIGRHTVTEFRDAGYDVTMLTRG------RRQNPFTN-AEVAHIEGDRRERDTLET 92
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
V DVV+D + VR D G +++ISS Y A+ P EG+
Sbjct: 93 ARER--VNPDVVVDCVAYFPEDVRVATDVFADVGA--YVYISSGAAYG-AERTPKREGET 147
Query: 205 VKPDAGHV-------QVEKY-------------ISENFSNWASFRPQYMIGSGNNKDCEE 244
P AG E Y +E+ S RP + G + +
Sbjct: 148 --PLAGCTAEQATTDSAETYGPRKAEGDREVFAAAEDGVQAMSVRPTVVYGPYDYTERFA 205
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
++ DR+ V +P G+ +A+V D++S L L E A + +N+ + A TL
Sbjct: 206 YWVDRVAEYDRVVVPSDGLSLWQMAYVEDVASALRLVAERGTAGEA--YNVGDEHAPTLR 263
Query: 305 GMAKLCAQAAGLPVEIV---HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRST 359
L A+ VE + + +AAG+ A FP + A LGW ST
Sbjct: 264 EWVDLLARVHETDVETIGVGERELRAAGL-APDDFPIYRDSPHLLSTAKLRGLGWSST 320
>gi|153007033|ref|YP_001381358.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. Fw109-5]
gi|152030606|gb|ABS28374.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. Fw109-5]
Length = 373
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 115/321 (35%), Gaps = 52/321 (16%)
Query: 52 ACPASSRRSSVSAFTVKASAAEKKK----VLIVNTNSGGHAVIGFYLAKELLGSGHEVTI 107
AC SR SS + + SA EK + V+ +G IG ++A+ LL GHEV+
Sbjct: 13 ACATLSRGSSGDP-SSRGSAREKARYAPAVMAPIVLTGCAGFIGSHVARRLLRDGHEVS- 70
Query: 108 MTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNG------ 161
G +N + P R + A + A+V + D VLD
Sbjct: 71 ---GLDNLNDYYDPSLKRARLALLAPERGFRFTAADVADRE---ALDAVLDEAEPEYVVH 124
Query: 162 -------------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
NLD V D GV+ ++ SS+ +Y ++ P E
Sbjct: 125 LAAQVGVRNSVRNPRAYAETNLDGFFNVLDGCARRGVRHLVYASSSSVYGSNEKVPFSEE 184
Query: 203 DVV---------KPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR-IVR 252
D V A + Y N R + G D F R I+R
Sbjct: 185 DPVDHPISFYAATKKANEIMAHAYSHLNRLPTTGLRFFTVYGPWGRPDMAPILFGRAILR 244
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP----EAASSNIFNLVSDRAVTLDGMAK 308
P+ + G + +V D+ ++T V P +AA + N+ +DR V L+
Sbjct: 245 GEPITLFNHGRMLRDFTYVDDVVEVVTALVPRPPEPEDAAPYRVLNVGNDRPVALEEFVA 304
Query: 309 LCAQAAGLPVEIVHYDPKAAG 329
+ + G P + Y P G
Sbjct: 305 ILERHLGRPA-LRKYAPMQPG 324
>gi|430749917|ref|YP_007212825.1| nucleoside-diphosphate-sugar epimerase [Thermobacillus composti
KWC4]
gi|430733882|gb|AGA57827.1| nucleoside-diphosphate-sugar epimerase [Thermobacillus composti
KWC4]
Length = 337
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 106/259 (40%), Gaps = 38/259 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---P 141
GG +I +++ ++ GHE+ + G R + V G K + GD
Sbjct: 7 GGTGLISQAVSRLVISQGHELYLFNRG-------------RRQDFVPEGEKVIEGDIRDA 53
Query: 142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG-VKQFLFISSAGIY-KP-----A 194
A + G +DVV+D + R AD G KQ++FISSA Y KP
Sbjct: 54 ASAAEALRGHEWDVVVDWIVFTPEQAR--ADIELFRGRTKQYVFISSASAYQKPLRHYII 111
Query: 195 DEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF-----RPQY-----MIGSGNNKDCEE 244
E +E + + EK + + + F RP Y MI + N +
Sbjct: 112 TESTPLENPYWQYSRDKIACEKLLMDEHKA-SGFLVTIVRPSYTYGDTMIPAAINSWEKP 170
Query: 245 W-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
W DR+ R +PV + G G + H D + + PEA +++ SD +T
Sbjct: 171 WSIVDRMRRGKPVIVHGDGTSLWTMTHNTDFAVGFAGLLGRPEAIGEA-YHITSDEVLTW 229
Query: 304 DGMAKLCAQAAGLPVEIVH 322
+ + + +AAG+ ++VH
Sbjct: 230 NQIYEAIGRAAGIEPKLVH 248
>gi|84684183|ref|ZP_01012085.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein,
putative [Maritimibacter alkaliphilus HTCC2654]
gi|84667936|gb|EAQ14404.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein,
putative [Rhodobacterales bacterium HTCC2654]
Length = 327
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 10/159 (6%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYISEN 221
NL R V D A+ GV++F+ +SS+ +Y D+ E D + K +SE
Sbjct: 92 NLIGTRNVVDLARRLGVRRFVQVSSSTVYFALRDQLDLREDDPLPKPFNQYARTKRLSEE 151
Query: 222 FSNWA------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS 275
+ A + RP+ + G+G+ + +RP+P+ G ++ HV D+
Sbjct: 152 IALAAPDIGPLAIRPRGLYGAGDTVLLPRLL--KTAAERPLPLLRGGAARIDLTHVEDVV 209
Query: 276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK-LCAQA 313
+ + ++ P +A +FN+ + + +A+ CA+A
Sbjct: 210 AAIIAGLDAPTSAEGEVFNVTGGETIPVTRLAESACARA 248
>gi|297197709|ref|ZP_06915106.1| NAD-dependent epimerase/dehydratase [Streptomyces sviceus ATCC
29083]
gi|197717415|gb|EDY61449.1| NAD-dependent epimerase/dehydratase [Streptomyces sviceus ATCC
29083]
Length = 323
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 23/243 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L L+ +GHEV ++ G + + P ++ ++V+ +
Sbjct: 7 GGSGHIGTFLVPRLVRAGHEVINISRGSRTA-YAEAPEWHHVRQVVA--DREQEDREGTF 63
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE-------- 196
G+ V + D V+D LD+ + + + + S + PAD+
Sbjct: 64 GDRVARLEPDAVIDLVCFTLDSATALVERLRGE-AGHLVHCGSVWRHGPADKLPISEATG 122
Query: 197 -PPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSG-------NNKDCEEWFFD 248
PP E + K + E+ S S P +++G G + D W+
Sbjct: 123 TPPVGEYGIQKDRIARMLKEETASGGLVT-TSLHPGHIVGPGWHPIGPLGSLDPAVWYT- 180
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
+ + + +PGSG++ + H D++ AVE+ +AA+ F +V+ A+ + G A+
Sbjct: 181 -LSAGQSLKVPGSGVELMHHVHADDVAQAFERAVEHRDAAAGEDFTIVAPTALNVRGYAR 239
Query: 309 LCA 311
+ A
Sbjct: 240 IAA 242
>gi|99081322|ref|YP_613476.1| NAD-dependent epimerase/dehydratase [Ruegeria sp. TM1040]
gi|99037602|gb|ABF64214.1| NAD-dependent epimerase/dehydratase [Ruegeria sp. TM1040]
Length = 319
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 102/252 (40%), Gaps = 38/252 (15%)
Query: 148 VGGV--TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEP------- 197
VGG+ D +D +NL +A+ A ++ V++FLF+ S+ IY K A +P
Sbjct: 73 VGGIKANSDYPVDFLLQNLQIETNLAEAAHAADVQRFLFLGSSCIYPKFAPQPIPEASLL 132
Query: 198 -----PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE--------- 243
P E V AG ++ Y + +W S P + G G+N D E
Sbjct: 133 TGALEPSNEWYAVAKIAGIKLMQAYRQQYGRDWISAMPTNLYGPGDNYDLETSHVLPALL 192
Query: 244 -EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
++ R+ V + GSG H DL+ L +++ A N+ S + ++
Sbjct: 193 HKFHTARLTGADQVTLWGSGTPLREFLHCDDLADALVFLLKHYSGADH--VNVGSGKEIS 250
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNL 362
+ +A+L A+ G+ E+V K G K R A +GW L
Sbjct: 251 IRALAELIAEIVGVSPELVFDSSKPDGTPRK---------LMDSARLAA--MGWSGARPL 299
Query: 363 PEDLKERFEEYV 374
+ + E + +V
Sbjct: 300 RDGIAETYAAFV 311
>gi|331007296|ref|ZP_08330497.1| UDP-glucose 4-epimerase [gamma proteobacterium IMCC1989]
gi|330418903|gb|EGG93368.1| UDP-glucose 4-epimerase [gamma proteobacterium IMCC1989]
Length = 315
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 98/231 (42%), Gaps = 28/231 (12%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKP-ADEPPHVEGDVVKP----DAGHVQVEKY 217
N+ +A A ++GVK+F+FISS G+ + E D V P +Q EK
Sbjct: 86 NVGGTLSLARQAAAAGVKRFVFISSIGVNGAFSCGSAFTEADSVNPYDFYTESKLQAEKG 145
Query: 218 ISENFS----NWASFRPQYMIGSGNNKDCEEWF--FDRIVRKRPVPIP-GSGMQFTNIAH 270
+ E RP + G G C F R+V K VP+P GS + ++
Sbjct: 146 LLELVELTGLEVVIVRPPLVYGPG----CPGMFSLLMRVV-KSGVPLPLGSLVNKRSMIA 200
Query: 271 VRDLSSMLTLAVE--NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-------LPVEIV 321
+ +L + L V+ A++ +F + D +++ + K A+A G PV ++
Sbjct: 201 LDNLVDFILLCVDIKRSREAANQVFVISDDFDISIKDLLKKMAKAYGKHQCLVPFPVSLM 260
Query: 322 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE 372
+ G K F +++ + AK +LGWR T + E L E +
Sbjct: 261 MFTACLMGQKVKAGKFFSDLN--VDCSKAKSLLGWRPVTTIDEQLSEMVRQ 309
>gi|414157729|ref|ZP_11414025.1| hypothetical protein HMPREF9188_00299 [Streptococcus sp. F0441]
gi|410871647|gb|EKS19594.1| hypothetical protein HMPREF9188_00299 [Streptococcus sp. F0441]
Length = 326
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 139/351 (39%), Gaps = 77/351 (21%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEV---------------TIMTV--GDENSDK 117
KKVL+ +G +G Y+ +EL G++V +++T GD +
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQQGYQVRAFGRNPKAGQSLENSLVTFFQGDLTKQE 57
Query: 118 MKKPPFNRFNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ +V AG TVWG P E D N+ + V D +
Sbjct: 58 DLAQACQGMDMVVHAGALSTVWG-PWE--------------DFYQTNVLGTKYVLDACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P D+ E + + + ++ YI ++ F
Sbjct: 103 AGIQRLVYVSSPSIYAAPRDQLAIKESEAPQEN----KLNNYIRSKLASEKLFKDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 159 SIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK-AAGIDAKKAFPFRNMHF 343
P+ AS ++N+ + + + + G P+ + I + F ++ +H
Sbjct: 217 PQ-ASGEVYNITNGEPREFRSLIEETLRGLGYPITYRKVPASLLSAIASTLEFIYKILHL 275
Query: 344 YAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 375
EP +A +D LG+R ++ E + + ++Y K
Sbjct: 276 KGEPVLTRYTYYLLRYSQTLDISKAERD-LGYRPRISISEGIDQYVQDYRK 325
>gi|398891080|ref|ZP_10644520.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM55]
gi|398187315|gb|EJM74659.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM55]
Length = 309
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 110/276 (39%), Gaps = 39/276 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN--RFNEIV----------- 130
+GG IG +L LL GH V I+ D ++ K P + + IV
Sbjct: 9 TGGAGFIGSHLTDALLAKGHGVRILD--DLSTGKRSNLPLDNPKVELIVGDVADAALVAQ 66
Query: 131 SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ G + A V +V V D + + N V + + +GVK+ LF SSA +
Sbjct: 67 AMAGCSAVAHMAAVASVQASV--DDPVKTHQSNFIGTLNVCEAMRQAGVKRVLFASSAAV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD 241
Y E ++ D K +K SE++ ++ +R Q+ + G +D
Sbjct: 125 YGNNGEGESIDEDTPKSPLTPYAADKLASEHYFDF--YRRQHALEPVIFRFFNIFGPRQD 182
Query: 242 -------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
F +R + P+ + G G Q + +V DL +L A+E P + N
Sbjct: 183 PSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFVYVEDLVDLLVQAIEKPRVEVGAV-N 241
Query: 295 LVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+ ++A TL M + G LP V Y P +G
Sbjct: 242 VGWNQATTLKQMLEALEAVVGKLPP--VSYGPARSG 275
>gi|398860812|ref|ZP_10616456.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM79]
gi|398234252|gb|EJN20135.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM79]
Length = 309
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 112/280 (40%), Gaps = 47/280 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG +L LL GH V I+ D ++ K P + N +V + + GD A+
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILD--DLSTGKRSNLPLD--NPLV----ELIVGDVAD 60
Query: 144 VGNVVGGV-----------------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
V + + D + + N V + + +GVK+ LF S
Sbjct: 61 AALVAQAMVGCSAVAHLAAVASVQASVDDPVKTHQSNFIGSLNVCEAMRQTGVKRVLFAS 120
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------G 237
SA +Y E ++ D K +K SE++ ++ +R Q+ + G
Sbjct: 121 SAAVYGNNGEGESIDEDTPKAPLTPYAADKLASEHYFDF--YRRQHSLEPVIFRFFNIFG 178
Query: 238 NNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
+D F +R + P+ + G G Q + +V DL +L A+E P+
Sbjct: 179 PRQDPSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFVYVEDLVGVLVQAIEKPQVEVG 238
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+ N+ ++A TL M + G LP V Y P +G
Sbjct: 239 AV-NVGWNQATTLKQMLEALEAVVGELPP--VSYGPARSG 275
>gi|73667591|ref|YP_303606.1| GDP-fucose synthetase [Methanosarcina barkeri str. Fusaro]
gi|72394753|gb|AAZ69026.1| GDP-fucose synthetase [Methanosarcina barkeri str. Fusaro]
Length = 312
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 127/319 (39%), Gaps = 50/319 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G L ++L G+ I E D + N+F E + V+ A+
Sbjct: 10 AGHRGLVGSALKRKLESKGYTNLIFRTHKE-LDLTNQQAVNKFFE--QEKPEYVFLAAAK 66
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-----KPADEPP 198
VG ++ T+ +NL + A GV++ LF+ S+ IY +P E
Sbjct: 67 VGGILANSTYPAEFIY--ENLMIESNIIHAAYKCGVEKLLFLGSSCIYPKLAPQPLKEEY 124
Query: 199 HVEGDVVKPDAGH-------VQVEKYISENF-SNWASFRPQYMIGSGNNKDCE------- 243
+ G + + + + +++ K+ + + +N+ S P + G +N D E
Sbjct: 125 LLTGSLEETNEAYAIAKIAGIRLCKHYNHQYGTNFISVMPTNLYGPNDNFDLETSHVMPA 184
Query: 244 --EWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF-NLVSDR 299
F + V +P V + G+G HV D++ +EN + + F N+
Sbjct: 185 LIRKFHEAKVNNKPEVVVWGTGKPLREFMHVDDMADACVFLMENYDFSEVGEFVNIGVGE 244
Query: 300 AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----L 354
VT+ + KL + G +I + K G PR D+ L
Sbjct: 245 DVTISELVKLIKEIVGFEGKINYDTSKPDGT----------------PRKLMDVSRLNGL 288
Query: 355 GWRSTTNLPEDLKERFEEY 373
GW++ +L + +KE +E Y
Sbjct: 289 GWKARMSLKDGIKETYEWY 307
>gi|398333101|ref|ZP_10517806.1| UDP-glucose 4-epimerase [Leptospira alexanderi serovar Manhao 3
str. L 60]
Length = 330
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 129/316 (40%), Gaps = 49/316 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-----------FNRFNEIVSA 132
+GG +G L LL G++VT++ + D +K+ P N N+ +
Sbjct: 11 TGGAGYVGAMLVPRLLNEGYKVTVLDLMIYGEDVLKEHPNLTKIQGDIRDQNVLNQTIPG 70
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLD-NNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + + +F++ D NLDA RP+ + +K + VK+F++ SS+ +Y
Sbjct: 71 HDSVI-----HLACISNDPSFELNPDLGKSINLDAFRPLVEISKKNRVKRFIYASSSSVY 125
Query: 192 KPADEP---------PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC 242
DEP P + K D + E Y +++F+ + RP + G +
Sbjct: 126 GIKDEPNVTEDFSLEPLTDYSKFKADCEKILAE-YQTDDFTT-VTIRPATVCGYSPRQRL 183
Query: 243 E---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSD 298
+ + KR + + G NI H+ D+ + + P E + I+N
Sbjct: 184 DVVVNILTNLAYHKREISVFGGAQLRPNI-HIDDMVDAYLVLLRAPKEKVAGEIYN-AGY 241
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS 358
T+ +A + + G V++V + +++ + Y + LG+R+
Sbjct: 242 LNFTVSEIANMVKEVVGEDVKLV-----TTPTNDNRSYHISSDKIYNQ-------LGFRA 289
Query: 359 TTNLP---EDLKERFE 371
++ EDLK+ F+
Sbjct: 290 NRSIKLAAEDLKKAFD 305
>gi|417917632|ref|ZP_12561191.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus parasanguinis SK236]
gi|342830269|gb|EGU64608.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus parasanguinis SK236]
Length = 325
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 116/300 (38%), Gaps = 63/300 (21%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVG-------------------DENSDKMKKPPFN 124
+G +G Y+ ELL H+ TI+ G D ++ + + F
Sbjct: 6 TGATGFLGKYVIDELLA--HDYTIVAFGRNEKIGKALEGERVQFIKGDLSTIEELRQAFQ 63
Query: 125 RFNEIVSAGG-KTVWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQ 181
+ +V AG T WG NVVG + V D + VK+
Sbjct: 64 SVDAVVHAGALSTAWGPWKAFYQANVVG-----------------TKNVLDLCREYAVKR 106
Query: 182 FLFISSAGIYKPADEPPHV-EGDVVKPDAGHVQ---VEKYISEN-FSNWAS-----FRPQ 231
+++SS IY + ++ E D P H+ K SE FS++ RP+
Sbjct: 107 LVYVSSPSIYAAGKDQLNIKESDT--PTENHLNNYIRSKLASEKLFSDYPDVPSIILRPR 164
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G G+ R+ RK +P+ G Q ++ V +++ + LA+E E A
Sbjct: 165 GLFGVGDTSILPRVL--RLSRKIGIPLIRGGEQLMDMTCVENVALAIRLALEAKE-AQGQ 221
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP----FRNMHFYAEP 347
++N+ + T + + + G P + Y AG+ A A+ +R H AEP
Sbjct: 222 VYNITNGEPKTFKYLIETTLKGLGEP---IRYRKIPAGLVAGAAYSLEGVYRFFHLKAEP 278
>gi|88604312|ref|YP_504490.1| NAD-dependent epimerase/dehydratase [Methanospirillum hungatei
JF-1]
gi|88189774|gb|ABD42771.1| NAD-dependent epimerase/dehydratase [Methanospirillum hungatei
JF-1]
Length = 343
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 33/227 (14%)
Query: 159 NNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQV 214
N NL + + A G K F+F SS +Y A EPP E P+ + + V
Sbjct: 97 NYTNNLIGSINLINEAVKVGTKCFVFTSSIAVYG-AIEPPMTEEKTPHPEDPYGISKLAV 155
Query: 215 EKYISENFS----NWASFRPQYMIGSGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQF 265
E + S N+ FRP + G N ++ F +I +P+ I G G Q
Sbjct: 156 ELDLMAAHSMFGLNYVIFRPHNVYGEYQNLSDPYRNVIGIFMKQIFEGQPMTIFGDGEQQ 215
Query: 266 TNIAHVRDLSSMLTLAVENPE--AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE-IVH 322
++V D+ + L V++P A +N+FN+ +D+ T++ +A A A G P VH
Sbjct: 216 RAFSYVGDI---IPLIVQSPTIPGALNNVFNVGADKPYTVNELASKVAIALGKPDHPTVH 272
Query: 323 YDPK-AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 368
P+ GI Y++ AK + G T+L + L++
Sbjct: 273 LPPRNEVGIA------------YSDHSKAKSVFGDSPHTSLDDGLEK 307
>gi|330467012|ref|YP_004404755.1| NAD-dependent epimerase/dehydratase [Verrucosispora maris
AB-18-032]
gi|328809983|gb|AEB44155.1| NAD-dependent epimerase/dehydratase [Verrucosispora maris
AB-18-032]
Length = 341
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 140/349 (40%), Gaps = 80/349 (22%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-------SDKMKKPPFNRF-- 126
KVL+ +G IG YL ELL GHEV VG +N S P RF
Sbjct: 3 KVLV----TGSAGFIGGYLVAELLDRGHEV----VGVDNFSKYGPVSHSYDTHPRFRFVE 54
Query: 127 ---------NEIVSAGGKTVWGDPAEVGNVVGGVTF-----DVVLDNNGKNLDAVRPVAD 172
E++ V G ++GG+++ +L N + + A A
Sbjct: 55 GDARDTDLLTELLDGCDHLVAG-----AAMIGGISYFHAYAYDLLATNERIMAATCDAAL 109
Query: 173 WAKSSG-VKQFLFISSAGIYKPADEPPHVEGD--VVKPDAGHVQVEKYISENFSN--WAS 227
A G +++ ++SS+ +Y+ + P EGD + P +K E ++ W
Sbjct: 110 RAHRDGTLRKVTYLSSSMVYESTEHWPSREGDERRIPPPLSSYGFQKLAVEYYARAAWEQ 169
Query: 228 F-------RPQYMIGSGNNKDCEEW-----------------FFDRIVRKR-PVPIPGSG 262
+ RP +G G + + +IV+ + P+ I G G
Sbjct: 170 YQLPFTIVRPFNCVGVGEGRALGQAEVLSGNVKLAMSHVVPDLVQKIVKGQDPLHILGEG 229
Query: 263 MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC---AQAAGLPVE 319
Q + + DL+ + A+E+P AA + FNL + R+ T+ +A+L + A +P
Sbjct: 230 DQVRHYTYGGDLARGIATAIEHP-AAHNEDFNLSTARSTTVLELAELIWHKIKGAEVPFR 288
Query: 320 IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 368
V +P D +K P + A ++LG+ +TT+L L E
Sbjct: 289 YVSDEPFR--YDVRKRVP--------DTTKAAEVLGFTATTSLDTMLDE 327
>gi|421489319|ref|ZP_15936701.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK304]
gi|400365951|gb|EJP18993.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK304]
Length = 326
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/351 (19%), Positives = 140/351 (39%), Gaps = 77/351 (21%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEV---------------TIMTV--GDENSDK 117
KKVL+ +G +G Y+ +EL G++V +++T GD +
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQQGYQVRAFGRNPKAGQSLENSLVTFFQGDLTKQE 57
Query: 118 MKKPPFNRFNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ +V AG TVWG +D N+ + V + +
Sbjct: 58 DLAQACQGMDMVVHAGALSTVWGP---------------WVDFYQTNVLGTKYVLEACQE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P D+ EG+ + + ++ YI ++ F
Sbjct: 103 TGIQRLVYVSSPSIYAAPRDQLAIKEGEAPQEN----KLNNYIRSKLASEKLFEDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 159 SIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAFPFRNMHF 343
P+ AS ++N+ + + + + G P+ P + I + F +R +
Sbjct: 217 PQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPITYRKVPAPLLSVIASSLEFLYRVLKL 275
Query: 344 YAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 375
EP +A +D LG+R ++ E +++ ++Y K
Sbjct: 276 KGEPALTRYTYYLLRYSQTLDISKAERD-LGYRPQISISEGIEQYVQDYRK 325
>gi|386817844|ref|ZP_10105062.1| NAD-dependent epimerase/dehydratase [Thiothrix nivea DSM 5205]
gi|386422420|gb|EIJ36255.1| NAD-dependent epimerase/dehydratase [Thiothrix nivea DSM 5205]
Length = 309
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 99/254 (38%), Gaps = 44/254 (17%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G Y+ LL +G+ ++ + + K + V+ G DPA +
Sbjct: 7 GGTGFVGSYVIDALLDAGYAPRVLV---RSGSEYK---LTQAERCVTVPGDI--SDPAAL 58
Query: 145 GNVVGGVTFDVVLDNNGKNLDA------------VRPVADWAKSSGVKQFLFISSAGIYK 192
GN + G + L + A V A+ GVKQF+ +S+ G+
Sbjct: 59 GNCLQGADTVIYLIGILREFPAKGITYEETQFRGVERTVAAAQKQGVKQFILMSANGVKA 118
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS--GNNKDCEEWFFDRI 250
G D + E+ + + W FRP + G GN + C + D+
Sbjct: 119 ---------GGTAYQDT-KFRAEQCVQASGLGWTIFRPSVIFGDPRGNMEFCTQ--LDKE 166
Query: 251 VRKRPVPIP--GSGMQFTNIA-------HVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+ + P+P P G+ HV+D++S AV NP AA+ +F L A
Sbjct: 167 LVQPPIPAPLFFGGLNIMQAGQFQMAPVHVQDVASAFAAAVGNP-AANQRVFPLCGPDAP 225
Query: 302 TLDGMAKLCAQAAG 315
T + + AQ AG
Sbjct: 226 TWKAILQTIAQVAG 239
>gi|333979172|ref|YP_004517117.1| UDP-glucuronate 4-epimerase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333822653|gb|AEG15316.1| UDP-glucuronate 4-epimerase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 319
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 130/323 (40%), Gaps = 47/323 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFN---EIVSAGGKTVWGD 140
+GG IG +L LL G VT++ +N D P R N + + V D
Sbjct: 7 TGGAGFIGSHLVDRLLSEGWRVTVV----DNFDPFYDPGIKRRNIAPHLEYSNYTLVEAD 62
Query: 141 PAEVGNVVGGVT--FDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQF 182
++ + ++ +DV++ K N+ + + + A+ GVKQF
Sbjct: 63 IRDMETLRQRLSGEYDVIVHLAAKAGVRPSIRDPIGYQEVNVRGTQNLLELAREWGVKQF 122
Query: 183 LFISSAGIYKPADEPPHVEGDVV----KPDAGHVQVEKYISENFSN-----WASFRPQYM 233
+F SS+ +Y P E D V P A + + +S+ + + R +
Sbjct: 123 IFASSSSVYGVNPNVPWREDDCVLMPISPYAATKVAGELLGHVYSHLYGIRFIALRLFTV 182
Query: 234 IGSGNNKDCEEWFFDR-IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
G D F R +++ P+PI G G + ++ D+ + A++ E + I
Sbjct: 183 YGPRQRPDLAIHKFARKMLKGEPIPIYGDGTSRRDYTYIDDVIQGMRAAMDYTE-SQYEI 241
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 352
NL +++ V+L M + + G+ + P+ + + +A A+
Sbjct: 242 INLGNNKTVSLLEMVRALEEVFGVKARLEILPPQPGDVPST----------WANVENARR 291
Query: 353 ILGWRSTTNLPEDLKERFEEYVK 375
+LG+R +T E L+ F +VK
Sbjct: 292 LLGFRPSTPFGEGLRS-FAAWVK 313
>gi|398999037|ref|ZP_10701790.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM18]
gi|398132656|gb|EJM21918.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM18]
Length = 309
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 110/274 (40%), Gaps = 35/274 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIVSAG------- 133
+GG IG +L LL GH V I+ + G ++ M P V+
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILDDLSTGKRSNLPMDNPLVELIEGDVADAALVAQAM 68
Query: 134 -GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
G + A V +V V D + + N V + + +GVK+ L+ SSA +Y
Sbjct: 69 LGCSAVAHLAAVASVQASV--DDPVKTHQSNFIGSLNVCEAMRQAGVKRVLYASSAAVYG 126
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD-- 241
E ++ D K V+K SE++ ++ +R Q+ + G +D
Sbjct: 127 NNGEGESIDEDTPKAPLTPYAVDKLASEHYFDF--YRRQHGLEPVIFRFFNIFGPRQDPS 184
Query: 242 -----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
F +R + P+ + G G Q + +V DL +L A+E P+ + N+
Sbjct: 185 SPYSGVISIFSERAQKGLPITVFGDGEQTRDFVYVEDLVDVLVQAIEKPQVEVGAV-NVG 243
Query: 297 SDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
++A TL M + G LP V Y P +G
Sbjct: 244 WNQATTLKQMLEALEAVVGKLPP--VSYGPARSG 275
>gi|405378690|ref|ZP_11032605.1| nucleoside-diphosphate-sugar epimerase [Rhizobium sp. CF142]
gi|397324790|gb|EJJ29140.1| nucleoside-diphosphate-sugar epimerase [Rhizobium sp. CF142]
Length = 321
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 99/249 (39%), Gaps = 21/249 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
+V+++ GH +G YL L+ +GHEV ++ G S KP + +
Sbjct: 3 RVIVIGAT--GH--VGTYLVPRLVEAGHEVVAISRG---SAAPYKPHEAWSRADIRHMDR 55
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY---- 191
G+ + + ++V+D ++ +A A V+ FL + +
Sbjct: 56 AALEAEGRFGDAIRALKGEIVIDMICFTTESNEQLAT-ALEGHVRHFLHTGTIWTHGFST 114
Query: 192 ---KPADEPPHVEGDV-VKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNN-----KDC 242
P + P GD VK A + + E P +++G G N
Sbjct: 115 VVPTPEEAPKKPFGDYGVKKAAIEADLLRMAREKNFPVTLIHPGHIVGPGWNPLNPAGHF 174
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
F + R + +P GM+ + H D++ + A+ PEAA F+ VS++AVT
Sbjct: 175 NPEVFTSLARGETLALPNFGMETVHHVHADDIAELFMAAIAKPEAAIGQAFHAVSEKAVT 234
Query: 303 LDGMAKLCA 311
L G A+ A
Sbjct: 235 LRGYAEAMA 243
>gi|398916484|ref|ZP_10657769.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM49]
gi|398174748|gb|EJM62533.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM49]
Length = 309
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 109/276 (39%), Gaps = 39/276 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN--RFNEIV----------- 130
+GG IG +L LL GH V I+ D ++ K P + R IV
Sbjct: 9 TGGAGFIGSHLTDALLAKGHAVRILD--DLSTGKRSNLPLDNPRVELIVGDVADAAVVTQ 66
Query: 131 SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ G + A V +V V D + + N V + + +GVK+ LF SSA +
Sbjct: 67 AMAGCSAVAHLAAVASVQASV--DDPVRTHQSNFIGTLNVCEAMRQAGVKRVLFASSAAV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD 241
Y E ++ D K +K E++ ++ +R Q+ + G +D
Sbjct: 125 YGNNGEGESIDEDTPKAPLTPYAADKLAGEHYFDF--YRRQHGLEPVIFRFFNIFGPRQD 182
Query: 242 -------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
F +R + P+ + G G Q + +V DL +L A+E P + N
Sbjct: 183 PSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFVYVEDLVDLLVQAIEKPRVEDGAV-N 241
Query: 295 LVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+ ++A TL M + G LP V Y P +G
Sbjct: 242 VGWNQATTLKQMLEALEAVVGQLPP--VSYGPARSG 275
>gi|294494777|ref|YP_003541270.1| NAD-dependent epimerase/dehydratase [Methanohalophilus mahii DSM
5219]
gi|292665776|gb|ADE35625.1| NAD-dependent epimerase/dehydratase [Methanohalophilus mahii DSM
5219]
Length = 310
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 126/322 (39%), Gaps = 54/322 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G + + L G+ ++ + D + N F E S + V+ A+
Sbjct: 10 AGHRGMVGSAIKRNLESKGY-TNLICLTHSELDLTDQQAVNEFFE--SEKPEYVFLAAAK 66
Query: 144 VGNVVGGVTF--DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-----KPADE 196
VG ++ T+ + + DN L + A GVK+ LF+ S+ IY +P E
Sbjct: 67 VGGILANSTYPAEFIYDN----LMIEANIIHAAHIYGVKKLLFLGSSCIYPKFAPQPMKE 122
Query: 197 PPHVEGDV--------VKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE----- 243
+ G++ V AG + Y + +N+ S P + G +N D E
Sbjct: 123 EYLLTGELESTNEAYAVAKIAGIRLCKHYNQQYGTNFISVMPTNLYGPNDNFDLETSHVM 182
Query: 244 -----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF-NLVS 297
++ +I + V I GSG HV D++ +EN + A F N+
Sbjct: 183 PALIRKFHEAKINNESKVTIWGSGSPKREFLHVDDMADACIYLMENYDYADIGEFVNIGV 242
Query: 298 DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI---- 353
+ +++ +A+L G +IV+ K G PR D+
Sbjct: 243 GKDLSIKELAELIKDVVGYEGDIVYDSSKPDGT----------------PRKLLDVSKLN 286
Query: 354 -LGWRSTTNLPEDLKERFEEYV 374
LGW S+ L E +K + YV
Sbjct: 287 GLGWTSSIGLKEGIKATYRWYV 308
>gi|417794063|ref|ZP_12441326.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK255]
gi|334271173|gb|EGL89567.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK255]
Length = 326
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 138/351 (39%), Gaps = 77/351 (21%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGD--ENS-------DKMKKP 121
KKVL+ +G +G Y+ +EL G++V VG ENS D K+
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQQGYQVRAFGRNRKVGQSLENSSVAFFQGDLTKQE 57
Query: 122 PFNR----FNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
R + +V AG TVWG P E D N+ + V D +
Sbjct: 58 DLARACQGMDMVVHAGALSTVWG-PWE--------------DFYQTNVLGTKYVLDACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
G+++ +++SS IY P D+ E + + + YI ++ F
Sbjct: 103 VGIQRLVYVSSPSIYAAPRDQLAIKESAAPQEN----NLNNYIRSKLASEKLFKDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 159 SIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK-AAGIDAKKAFPFRNMHF 343
P+ AS ++N+ + + + + G P+ + I + F ++ +H
Sbjct: 217 PQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPITYRKVPASLLSAIASTLEFIYKILHL 275
Query: 344 YAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 375
EP +A +D LG+R ++ E + + ++Y K
Sbjct: 276 KGEPVLTRYTYYLLRYSQTLDISKAERD-LGYRPRISISEGIDQYVQDYRK 325
>gi|398996360|ref|ZP_10699218.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM21]
gi|398127082|gb|EJM16499.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM21]
Length = 309
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 110/274 (40%), Gaps = 35/274 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE--IVSAGGKTVWGDP 141
+GG IG +L LL GH V I+ D ++ K P + N IV T
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILD--DLSTGKRSNLPLDNPNLELIVGDVADTALVAQ 66
Query: 142 AEVG-------NVVGGVTFDVV--LDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
A VG V V VV + + N V + + +GVK+ LF SSA +Y
Sbjct: 67 AMVGCSAVAHLAAVASVQASVVDPVKTHQSNFIGSLNVCEAMRQAGVKRVLFASSAAVYG 126
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD-- 241
E ++ + K V+K SE++ + +R Q+ + G +D
Sbjct: 127 NNGEGESIDEETPKSPLTPYAVDKLASEHYFEF--YRRQHGLEPVIFRFFNIFGPRQDPS 184
Query: 242 -----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
F +R + P+ + G G Q + +V DL +L A+E P + + N+
Sbjct: 185 SPYSGVISIFSERARQGLPITVFGDGEQTRDFVYVEDLIELLVQAIEKPHVEAGAV-NVG 243
Query: 297 SDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
++A +L M + G LP + Y P +G
Sbjct: 244 WNQATSLKQMLQALEAVLGELPP--ISYGPARSG 275
>gi|345006718|ref|YP_004809571.1| NAD-dependent epimerase/dehydratase [halophilic archaeon DL31]
gi|344322344|gb|AEN07198.1| NAD-dependent epimerase/dehydratase [halophilic archaeon DL31]
Length = 330
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 120/304 (39%), Gaps = 51/304 (16%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + ++LL +EVTI G+ + PF G + + GD E
Sbjct: 9 GGTRFIGRHTVEDLLEHDYEVTIFNRGNHEN------PFAD-----REGVEQIEGDRRED 57
Query: 145 GNVVGGVTF---DVVLDNNG---KNLD-AVRPVADWAKSSGVKQFLFISSAGIY------ 191
++ D+V+D +++D AV AD V +++ISS Y
Sbjct: 58 QDLRAAALSARPDIVIDCVAYYPEDVDVAVDIFAD------VDGYVYISSGDAYGEEWIP 111
Query: 192 --------KPADEPPHVEGDVVKPDAGHVQVE-----KYISENFSNWASFRPQYMIGSGN 238
+P E V D G+ + E + +E N S RP + G +
Sbjct: 112 KREGATPMRPCTEEQAV--DDSDETYGNRKAEGDRIVQRAAEEGVNAMSVRPCIVYGPYD 169
Query: 239 NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
+++ DR+ + +PG G + A+ D+ S L E E +N+
Sbjct: 170 YTGRMDYWLDRVDTHDRIVVPGDGQNLWHRAYAPDVGSALRTVAE--EGEPGKFYNVGDQ 227
Query: 299 RAVTLDGMAKLCAQAAGLPVEIV---HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILG 355
RAVTL+ M L A A +E+V + AAG++ + +R + D LG
Sbjct: 228 RAVTLEEMLDLVADAMDTDLEVVTAGERELAAAGLEPEDFILYREYPHMLDTSTLAD-LG 286
Query: 356 WRST 359
W ST
Sbjct: 287 WEST 290
>gi|322373189|ref|ZP_08047725.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus
sp. C150]
gi|321278231|gb|EFX55300.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus
sp. C150]
Length = 326
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/354 (19%), Positives = 138/354 (38%), Gaps = 83/354 (23%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEV-----------------TIMTVGDENSDK 117
KKVL+ +G +G Y+ +EL+ G++V GD + +
Sbjct: 2 KKVLV----TGATGFLGKYVVEELVEHGYQVRAFGRNRAIGQSLVNASVTFIQGDLTNQE 57
Query: 118 MKKPPFNRFNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ +V AG TVWG P E D N+ + V + +
Sbjct: 58 DLTKACQEMDMVVHAGALSTVWG-PWE--------------DFYQTNVLGTKYVLEACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+ +++ +++SS IY P D+ E D + + ++ YI ++ F
Sbjct: 103 AKIERLVYVSSPSIYAAPRDQLGIKESDAPQEN----RLNNYIRSKLASEKLFKDYPDVS 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIV---RKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
RP+ + G G+ R++ +K +P+ G G Q ++ V +++ + LA
Sbjct: 159 SVILRPRGLFGIGDTS-----ILPRVLNLSQKIGIPLIGDGRQLMDMTCVENVALAIRLA 213
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAFPFRN 340
+E P+AA ++N+ + + + + G P+ P + I + F +++
Sbjct: 214 LETPQAA-GEVYNITNGEPRAFRNLIEETLRGLGYPIRYRKIPAPLVSVISSSLEFIYKS 272
Query: 341 MHFYAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 375
+ EP +A +D LG+R + E +++ ++Y K
Sbjct: 273 LKLKGEPALTRYTYYLLRYSQTLDISKAERD-LGYRPKITISEGIEQYVQDYRK 325
>gi|323703005|ref|ZP_08114661.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum nigrificans
DSM 574]
gi|333924728|ref|YP_004498308.1| UDP-glucose 4-epimerase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323532018|gb|EGB21901.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum nigrificans
DSM 574]
gi|333750289|gb|AEF95396.1| UDP-glucose 4-epimerase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 306
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 132/313 (42%), Gaps = 36/313 (11%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK-PPFNRFNE--IVSAGGKTVW-- 138
+GG IG ++ LL +GHEV + V + +S K + PP F + I G ++
Sbjct: 6 TGGAGFIGSHIVDALLKAGHEV--LVVDNLSSGKKENLPPEVPFYQMDITDPGIAGIFEA 63
Query: 139 GDPAEVGNVVGGVTFDVVLD----NNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
P V + V V L + N+ + + A+ V + +F SSA +Y
Sbjct: 64 ARPQAVIHQAAQVAVPVSLRDPIFDARVNIIGTLNLLEAARRVKVGKMVFASSAAVYGNP 123
Query: 195 DEPPHVEGDVVKPDAGH----VQVEKYI---SENFS-NWASFRPQYMIGSGNNKDCE--- 243
+ P E ++P +G+ VE+Y+ E + +W + R + G + E
Sbjct: 124 NYLPVDEDHDLRPLSGYGISKHTVERYLEAYQELYGLSWTALRYANVYGPRQDAQGEGGV 183
Query: 244 -EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
F D+++ + I G G Q + +V+D+++ A+ A + I N+ + +A T
Sbjct: 184 VAVFIDKLLHNQRPQIFGDGEQTRDFVYVKDVAAANVAAL---SAGDNQILNISTGKAST 240
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNL 362
++ + L Q G +E + P+ I +H Y + A L W+ L
Sbjct: 241 VNELYSLLKQTIGSALEPEYAPPRPGDI----------VHSYLDNSKAVARLNWQPQYEL 290
Query: 363 PEDLKERFEEYVK 375
LKE E Y++
Sbjct: 291 ARGLKETVEHYLR 303
>gi|119718949|ref|YP_919444.1| NAD-dependent epimerase/dehydratase [Thermofilum pendens Hrk 5]
gi|119524069|gb|ABL77441.1| NAD-dependent epimerase/dehydratase [Thermofilum pendens Hrk 5]
Length = 308
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 127/318 (39%), Gaps = 37/318 (11%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM------TVGDENSDKMKKPPFNRFNEIVSAGGKTV 137
+GG IGF A+ L G +V ++ TVG E+ +K+ + A + +
Sbjct: 6 TGGAGFIGFNTARYLASRGFQVVVLDDFSRATVGREDLEKVGAEVYEGDVRDAEALRRFL 65
Query: 138 WGDPAEVGNVVGGVTFDVVLDNNGK-------NLDAVRPVADWAKSSGVKQFLFISSAGI 190
G A V+ V ++ + N++ R + A +GV++ +F SSA +
Sbjct: 66 SGVDA----VIHLAALVDVRESEERPEEYWSVNVEGTRALLAEASRAGVRKVVFASSAAV 121
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI--------GSGNNKDC 242
Y E +P + + + K + E + S R + G + +
Sbjct: 122 YGDLGGLTAGEEVDARPKSFY-GLTKRVGEELCRFFSGRGVVCVALRIFNVYGEYSRRGV 180
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
F R++ PV + G G Q + +V D++ AV + +FN+ S R V+
Sbjct: 181 IYEFARRVLSGLPVKVYGDGNQTRDFVYVGDVARAFE-AVIAEWSGGFEVFNVASGRCVS 239
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNL 362
++ + +L Q G K G+ + A P A A +LG+R++T+L
Sbjct: 240 VNELVRLFEQVTG----------KRVGVLREPARPEEIRRSCASTEKAARMLGFRASTSL 289
Query: 363 PEDLKERFEEYVKIGRDK 380
E ++ E + DK
Sbjct: 290 EEGVRRVVEWVARYAEDK 307
>gi|427707127|ref|YP_007049504.1| UDP-glucose 4-epimerase [Nostoc sp. PCC 7107]
gi|427359632|gb|AFY42354.1| UDP-glucose 4-epimerase [Nostoc sp. PCC 7107]
Length = 322
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 114/282 (40%), Gaps = 41/282 (14%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM--TVGDENSDKMKKPP---------F 123
++V++V +GG IG +L +EL+ G+ V ++ + + + PP
Sbjct: 3 RQVVLV---TGGCGFIGSHLVEELVNRGYYVRVLDNLYTGKLENLLAVPPDRWEWIKGDV 59
Query: 124 NRFNEIVSA--GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQ 181
+N + A G V+ A + N+ +F + + N V A VK+
Sbjct: 60 TNYNHVKKATQGCDYVF-HQAAIANIAA--SFQDTVGTHQVNYGGTANVLKAAHHCRVKR 116
Query: 182 FLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEK----YISENFSNWASFRPQYM 233
+F SSA +Y P E P A + E+ Y + + S R +
Sbjct: 117 VIFASSAAVYGNDPTLPKRESMPTHPISPYGADKLASEQLGQIYHQQGLVEFVSLRYFNV 176
Query: 234 IGSGNNKDCE---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
G N D F DRI + P I G+G+Q + HV D+ +A+++P+AA
Sbjct: 177 FGLRQNSDYTGVISQFCDRIRQSVPPIIYGNGLQSRDFIHVSDVVQANLIAMKHPQAAGK 236
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAA----------GLPVEIVH 322
IFN+ +A +L + L Q GLP +I H
Sbjct: 237 -IFNIGCGQATSLLELIALLNQITKQNLRPIFRPGLPGDIHH 277
>gi|254478563|ref|ZP_05091937.1| NAD dependent epimerase/dehydratase family protein
[Carboxydibrachium pacificum DSM 12653]
gi|214035492|gb|EEB76192.1| NAD dependent epimerase/dehydratase family protein
[Carboxydibrachium pacificum DSM 12653]
Length = 311
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 103/225 (45%), Gaps = 29/225 (12%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 222
N+ + + + SGVK+ ++ SSA +Y + P E + P + + K+ +E++
Sbjct: 92 NILGTVNLLECCRKSGVKKIVYASSAAVYGNPEYLPIDEVHKINP-ISYYGISKHTAEHY 150
Query: 223 ---------SNWASFRPQYMIGSGNNKDCE----EWFFDRIVR-KRPVPIPGSGMQFTNI 268
+ R + G + E F D++++ +RP+ I G G Q +
Sbjct: 151 FEVYSQLYGLKYTILRYANVYGIRQDPKGEGGVISIFIDKMLKGERPI-IFGDGKQTRDF 209
Query: 269 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 328
+V+D++ LA++ + + N+ +++ +++ + ++ + ++ ++ +P+
Sbjct: 210 VYVKDVAKANLLALKR---GDNEVVNISTNKPTSINELVEIMNKIMNTSLKPIYTEPRKG 266
Query: 329 GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 373
I +H Y + + A ++LGW+ +L + L+E E Y
Sbjct: 267 DI----------IHSYLDNKKALEVLGWKPEYSLEDGLRETIEYY 301
>gi|398948084|ref|ZP_10672564.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM33]
gi|398161092|gb|EJM49335.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM33]
Length = 309
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 111/276 (40%), Gaps = 39/276 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN--RFNEIV----------- 130
+GG IG +L LL GH V I+ D ++ K P + + IV
Sbjct: 9 TGGAGFIGSHLTDALLAKGHGVRILD--DLSTGKRSNLPLDNPKVELIVGDVADAALVAQ 66
Query: 131 SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ G + A V +V V D + + N V + + +GVK+ LF SSA +
Sbjct: 67 AMAGCSAVAHLAAVASVQASV--DDPVRTHQSNFIGTLNVCEAMRQAGVKRVLFASSAAV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD 241
Y E ++ D K V+K SE + ++ +R Q+ + G +D
Sbjct: 125 YGNNGEGESIDEDTPKAPLTPYAVDKLASEQYFDF--YRRQHGLEPVIFRFFNIFGPRQD 182
Query: 242 -------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
F +R ++ P+ + G G Q + +V DL +L A+E A + N
Sbjct: 183 PSSPYSGVISIFSERALKGLPITVFGDGEQTRDFVYVEDLVDLLVQAIEKHRAEVGAV-N 241
Query: 295 LVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+ ++A TL M + G LP V Y P +G
Sbjct: 242 VGWNQATTLKQMLEALEAVVGQLPP--VSYGPARSG 275
>gi|359800693|ref|ZP_09303232.1| GDP-L-fucose synthase [Achromobacter arsenitoxydans SY8]
gi|359361394|gb|EHK63152.1| GDP-L-fucose synthase [Achromobacter arsenitoxydans SY8]
Length = 317
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 129/329 (39%), Gaps = 54/329 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G + +EL G+ ++T D + +RF V+ A+
Sbjct: 11 AGHRGMVGAAITRELHRRGYN-NVLTRSRTELDLENQNQVHRFFSTTPV--DVVYLAAAK 67
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD 203
VG ++ T V D KNL V A ++GV++ LF+ S+ IY P + P + D
Sbjct: 68 VGGILANNTHPV--DFLYKNLMIQCNVIRAAYAAGVRKLLFLGSSCIY-PREAPQPIRED 124
Query: 204 --------------VVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFD 248
+ AG E Y E + + P + G +N D
Sbjct: 125 ALLTGPLEATNEPYAIAKIAGLKLCEAYQREFGARFICAMPTNLYGPHDNYDLHSSHVLP 184
Query: 249 RIVRK---------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
++RK V I G+G +V DL+ + +E+P+A I+N+ + +
Sbjct: 185 ALIRKFHEGREAGQESVTIWGTGAPLREFLYVDDLAQGCVMLMEHPDA--EGIYNIGAGK 242
Query: 300 AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD-----IL 354
+++ +A+L A+ G IV+ K G PR D L
Sbjct: 243 DISIADLAQLVARVVGYRGNIVYDTSKPDGT----------------PRKLMDSSRVQAL 286
Query: 355 GWRSTTNLPEDLKERFEEYVKIGRDKKAM 383
GWR +L + + + +++ R ++A+
Sbjct: 287 GWRPEISLTDGITLAYGHFLR-ERTQQAL 314
>gi|398901758|ref|ZP_10650549.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM50]
gi|398179369|gb|EJM66981.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM50]
Length = 309
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 111/276 (40%), Gaps = 39/276 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF-NRFNEIVSAG--------- 133
+GG IG +L LL GH V I+ D ++ K P N E++
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILD--DLSTGKRSNLPLDNPLIELIVGDVADAALVAQ 66
Query: 134 ---GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
G + A V +V V D + + N V + + +GVK+ L+ SSA +
Sbjct: 67 AMVGCSAVAHLAAVASVQASV--DDPVKTHQSNFIGSLNVCEAMRQTGVKRVLYASSAAV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD 241
Y E ++ D K +K SE++ ++ +R Q+ + G +D
Sbjct: 125 YGNNGEGESIDEDTPKAPLTPYAADKLASEHYFDF--YRRQHSLEPVIFRFFNIFGPRQD 182
Query: 242 -------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
F +R + P+ + G G Q + +V DL +L A+E P+ + N
Sbjct: 183 PSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFVYVEDLVDVLVQAIEKPQVEVGAV-N 241
Query: 295 LVSDRAVTLDGM-AKLCAQAAGLPVEIVHYDPKAAG 329
+ ++A TL M A L A LP V Y P +G
Sbjct: 242 VGWNQATTLKQMLAALEAVVGKLPP--VSYGPARSG 275
>gi|147679101|ref|YP_001213316.1| nucleoside-diphosphate-sugar epimerases [Pelotomaculum
thermopropionicum SI]
gi|146275198|dbj|BAF60947.1| nucleoside-diphosphate-sugar epimerases [Pelotomaculum
thermopropionicum SI]
Length = 314
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 128/329 (38%), Gaps = 54/329 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+L+ +GG IG ++ L GSGH V++ +D + F N V+
Sbjct: 2 KILV----TGGAGFIGSHIVDLLAGSGHVVSV-------ADDLSTGRFENINPAVNFYRV 50
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGV 179
+V + E G VV D V+ + N+ + + + GV
Sbjct: 51 SVASE--EFGEVVARERPDAVVHQAAQVDVQHSLRDPLADAETNIQGSINLLEACRRFGV 108
Query: 180 KQFLFISSAGIY-KPADEPPHVEGDVVKPD---AGHVQVEKYI---SENFS-NWASFRPQ 231
+ ++ SSA +Y P P E +V A + E Y SE + + R
Sbjct: 109 GKVVYASSAAVYGNPLSLPVDEEHPLVPRSPYGASKLAAEHYFRVYSEVYGVRYTVLRYA 168
Query: 232 YMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
+ G + E F DR+++ P I G G Q + VRD++ A+ +
Sbjct: 169 NVYGPRQDAAGEGGVVAIFIDRLLKGEPPSIFGDGEQTRDFVFVRDVALANVAALHGGDG 228
Query: 288 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 347
+ N+ + RA +++ + + + G P+E ++ P+ I H Y
Sbjct: 229 M---VLNVGTGRATSVNDLFREIKKITGSPLEALYCPPRPGDI----------THSYLAN 275
Query: 348 RAAKDILGWRSTTNLPEDLKERFEEYVKI 376
+ +LGW + +L + L+E Y K+
Sbjct: 276 GRIRRVLGWNPSCSLEDGLRETVGHYRKV 304
>gi|338729935|ref|YP_004659327.1| NAD-dependent epimerase/dehydratase [Thermotoga thermarum DSM 5069]
gi|335364286|gb|AEH50231.1| NAD-dependent epimerase/dehydratase [Thermotoga thermarum DSM 5069]
Length = 307
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 178 GVKQFLFISSAG-IYK---PADEPPHVEGDVVKP-----DAGHVQVEKYISENFSNWASF 228
GVK+F+F S+ G IY P P VE + P + + +E + E ++ S
Sbjct: 109 GVKKFIFSSTGGAIYGEDVPIPTPETVEPRPISPYGIAKRSAEMYLEFFKREYNLDYVSL 168
Query: 229 RPQYMIGSGNNKDCEE----WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
R + G + + E F R+++ V I G G + +V+D+ LA+++
Sbjct: 169 RYGNVYGPRQDPNGEAGVVAIFTARMLKNEDVIIFGDGEYVRDYVYVKDVVQANLLAMKD 228
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFY 344
S ++N+ + T++ + K+ A+ G + V+ P+ D +K+
Sbjct: 229 ---GVSGVYNIGTGIGTTVNQLFKMLARLTGYQKQPVYAPPRKG--DLRKSI-------- 275
Query: 345 AEPRAAKDILGWRSTTNLPEDLKERFEEY 373
+P AK+ LGW TNL E L E +
Sbjct: 276 LDPTKAKNELGWSPQTNLEEGLALTIEYF 304
>gi|398874798|ref|ZP_10629998.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM74]
gi|398194021|gb|EJM81106.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM74]
Length = 309
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 110/276 (39%), Gaps = 39/276 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF-NRFNEIVSAGGK------- 135
+GG IG +L LL GH V I+ D ++ K P N E++
Sbjct: 9 TGGAGFIGSHLTDALLAKGHAVRILD--DLSTGKRSNLPLDNPRVELIVGDVADAAVVAQ 66
Query: 136 -----TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ A V +V V D + + N V + + +GVK+ LF SSA +
Sbjct: 67 AMAGCSAVAHLAAVASVQASV--DDPVRTHQSNFIGTLNVCEAMRQAGVKRVLFASSAAV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD 241
Y E ++ D K V+K SE + ++ +R Q+ + G +D
Sbjct: 125 YGNNGEGESIDEDTPKAPLTPYAVDKLASEQYFDF--YRRQHGLEPVIFRFFNIFGPRQD 182
Query: 242 -------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
F +R ++ P+ + G G Q + +V DL +L A+E P A + N
Sbjct: 183 PSSPYSGVISIFSERALKGLPITVFGDGEQTRDFVYVEDLVDLLVQAIEKPLAEVGAV-N 241
Query: 295 LVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+ ++A TL M + G LP V Y P +G
Sbjct: 242 VGWNQATTLKQMLEALEAVVGKLPP--VSYGPARSG 275
>gi|284034275|ref|YP_003384206.1| NAD-dependent epimerase/dehydratase [Kribbella flavida DSM 17836]
gi|283813568|gb|ADB35407.1| NAD-dependent epimerase/dehydratase [Kribbella flavida DSM 17836]
Length = 317
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 100/255 (39%), Gaps = 47/255 (18%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-PAE 143
GG IG YL L+ +GHEVT+++ G+ + P+ E + V D PAE
Sbjct: 7 GGTGHIGTYLVPGLVRAGHEVTVLSRGE-------RTPYRASGEWQQV--EMVAADRPAE 57
Query: 144 -----VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
G V + DVV+D D+ R +A+ A V+ L + ++ P+ P
Sbjct: 58 DAAGTFGPRVAELRPDVVIDLICFTEDSARQLAE-ALHGKVQHLLHCGTIWVHGPSASVP 116
Query: 199 HVEGDVVKPDAGHVQVEKYISENF----------------------SNWASFRPQYMIGS 236
E D + G V+K E + WA P +
Sbjct: 117 TRE-DAPRRPFGDYGVQKAAIETYLLDRARRDGLPVTLIHPGHISGPGWAPVNPAGHLDL 175
Query: 237 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
G F+++ R + +P G++ H D++ + A+ N A F+ V
Sbjct: 176 G--------VFEKLARGDELALPNLGLETVQHVHAADVAGVFLAALANRSVAVGESFHAV 227
Query: 297 SDRAVTLDGMAKLCA 311
+D A+TL G A+ A
Sbjct: 228 ADGALTLRGYAEGAA 242
>gi|409422462|ref|ZP_11259559.1| NAD-dependent epimerase/dehydratase [Pseudomonas sp. HYS]
Length = 309
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 116/274 (42%), Gaps = 35/274 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFN------EIV--SA 132
+GG IG +L+ LL G+ V I+ + G ++ +M P E+V +A
Sbjct: 9 TGGAGFIGSHLSDALLEKGYAVRILDDLSSGKRSNLQMDNPRLQLVEGDVADAELVKRAA 68
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
G A V +V V D + + N V + + +G+K+ LF SSA +Y
Sbjct: 69 AGCQAVVHLAAVASVQASV--DDPVKTHQSNFIGTLNVCEAMRLNGIKRVLFASSAAVYG 126
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD-- 241
E ++ D VK V+K SE + ++ +R Q+ + G +D
Sbjct: 127 NNGEGQSIDEDTVKAPLTPYAVDKLASEQYLDF--YRRQHGLEPVVFRFFNIFGPRQDPS 184
Query: 242 -----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
F +R + P+ + G G Q + +V DL S++ A+E A + N+
Sbjct: 185 SPYSGVISIFCERALNGTPITLFGDGEQTRDFLYVGDLVSVMVQALEMAAVAEGAV-NIG 243
Query: 297 SDRAVTLDG-MAKLCAQAAGLPVEIVHYDPKAAG 329
++A +L+ +A L + LP + Y P +G
Sbjct: 244 LNQATSLNQLLAALKSVVGDLPA--ISYGPARSG 275
>gi|373458178|ref|ZP_09549945.1| NAD-dependent epimerase/dehydratase [Caldithrix abyssi DSM 13497]
gi|371719842|gb|EHO41613.1| NAD-dependent epimerase/dehydratase [Caldithrix abyssi DSM 13497]
Length = 316
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 99/230 (43%), Gaps = 28/230 (12%)
Query: 157 LDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD------AG 210
L++N NL+ V AK +GVK+ ++ +S+ Y P VE +KP+
Sbjct: 90 LESNDVNLNGTLNVLYAAKENGVKRVVYAASSSAYGDTPTLPKVE--TMKPNPLSPYAVN 147
Query: 211 HVQVEKYISENFSNWA--SFRPQYMIGSGNNKDCEEWF------FDRIVRKRPVP-IPGS 261
+ E+Y S + + + +Y G +D ++ F + K P I G
Sbjct: 148 KLAAEQYCSVFYKVYGLETVALRYFNIFGPRQDPNSYYSAVIPKFIKAFFKGESPVIYGD 207
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
G Q + ++ ++ A + P+A ++FN+ +TL+ +A+ + G V+ V
Sbjct: 208 GSQSRDFTYIENVIDANLKACKAPDA-PGHVFNIACGERITLNELAEELRKIIGSDVQPV 266
Query: 322 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 371
H DP+ I H A+ AA+ +LG++ + E LK E
Sbjct: 267 HGDPRPGDIK----------HSLADISAAQKLLGYQVKVRVHEGLKRTVE 306
>gi|403716140|ref|ZP_10941750.1| NAD-dependent epimerase/dehydratase family protein [Kineosphaera
limosa NBRC 100340]
gi|403210056|dbj|GAB96433.1| NAD-dependent epimerase/dehydratase family protein [Kineosphaera
limosa NBRC 100340]
Length = 342
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 113/274 (41%), Gaps = 60/274 (21%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG------------------DENSDK 117
K+L+ +G +G LA L+ GHEV + G D++
Sbjct: 2 KILV----TGTEGYLGCLLAPLLIADGHEVVAVDTGFYKNGWLYNGLESTPFTLDKDMRD 57
Query: 118 MKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS 177
+ F + +V+ + DP VG++VG +TFD+ N VA+ AK +
Sbjct: 58 LTVEDFEGVDAVVAMAELS--NDP--VGDLVGPITFDI-------NHKGSVHVAETAKKA 106
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDV-----VKPDAGHVQVEKYISENFSNW----ASF 228
GVK+F+++SS +Y A EGDV V P + + KY++E W +F
Sbjct: 107 GVKRFVYMSSCSVYGVA------EGDVDETSPVNPQTAYGEC-KYLTEQ-DLWKMADENF 158
Query: 229 RPQYMIGSGNNKDCEEWFFDRIVR--------KRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
P M + FD ++ ++ + + G + + H D+ + +
Sbjct: 159 HPTAMRNATAFGASPRQRFDIVLNNLSGLAWVEKKIAMTSDGTPWRPMVHALDICKSIRM 218
Query: 281 AVENP-EAASSNIFNLVS-DRAVTLDGMAKLCAQ 312
+E P E S FN+ S D T+ +A+ AQ
Sbjct: 219 VLEAPVEKVSGEAFNVGSYDNNYTVRQIAETVAQ 252
>gi|268578633|ref|XP_002644299.1| Hypothetical protein CBG14085 [Caenorhabditis briggsae]
Length = 342
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 85/211 (40%), Gaps = 17/211 (8%)
Query: 178 GVKQFLFISSAGIYKPA--DEPPHVEGDVVKPDAGHVQVEKYISENF--SNWASFRPQYM 233
GVK+ + IS+ +Y + D P E + K E S W S++ Y+
Sbjct: 128 GVKKLVHISTDEVYGDSFEDTTPKSESASLPNPTNPYAASKAACEMVIRSYWHSYKLPYV 187
Query: 234 IGSGNNKDCEEWFFDRIVRK--------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
+ NN +++ K +P P+ G G+ + +V D S +T
Sbjct: 188 MVRMNNVYGPRQIHTKLIPKFTKLALDGQPYPLMGDGLHTRSWMYVEDCSEAITRVAL-- 245
Query: 286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 345
E I+N+ +D +T + K+ +I++ +P A P+ + +Y
Sbjct: 246 EGTLGEIYNIGTDFEMTNIELTKMIHSTVS---KILNREPTAPTFAPIPDRPYHDRRYYI 302
Query: 346 EPRAAKDILGWRSTTNLPEDLKERFEEYVKI 376
+ K+ +GW+ TT E L E YVK+
Sbjct: 303 DFSKIKNAMGWQCTTPFSEGLMTTIEYYVKL 333
>gi|218296664|ref|ZP_03497382.1| NAD-dependent epimerase/dehydratase [Thermus aquaticus Y51MC23]
gi|218242977|gb|EED09510.1| NAD-dependent epimerase/dehydratase [Thermus aquaticus Y51MC23]
Length = 317
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 121/315 (38%), Gaps = 51/315 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G + + L G++ ++ E ++ + F E + V+ A+
Sbjct: 10 AGHRGLVGSAILRRLQAEGYQNLVLRTRKELDLTDQRAVYRFFEE---ERPEYVFLAAAK 66
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEP----- 197
VG ++ T+ D +NL V D A GVK+ LF+ S+ IY K A +P
Sbjct: 67 VGGILANATYPA--DFIRENLLIQTNVIDAAYRYGVKKLLFLGSSCIYPKYAPQPMKEEY 124
Query: 198 -------PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE------- 243
P E V AG V+ Y + N S P + G G+N D E
Sbjct: 125 LLTGPLEPTNEAYAVAKIAGIEMVQAYRRQYGFNGISLMPTNLYGPGDNFDLETSHVIPA 184
Query: 244 --EWFFDRIVRKR-PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
F + V R V + G+G HV DL+ + + + I N+
Sbjct: 185 LLRKFHEAKVSGRWEVVVWGTGTPRREFLHVDDLADAALFLMRHYDG--EEIVNVGVGED 242
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LG 355
+++ +A+L A+ G +IV+ K G PR D+ +G
Sbjct: 243 ISIRELAELIAKVVGFRGKIVYDTSKPDGT----------------PRKLLDVSRLFSMG 286
Query: 356 WRSTTNLPEDLKERF 370
WR L E L++ +
Sbjct: 287 WRPRIPLEEGLRQTY 301
>gi|340344000|ref|ZP_08667132.1| UDP-glucose 4-epimerase [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339519141|gb|EGP92864.1| UDP-glucose 4-epimerase [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 310
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 160 NGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDVVKPD--AGHV 212
N N++ V ++ + +K+ +F SSA IY K + P V V G
Sbjct: 92 NDVNVNGTLNVLEFCRKRKIKKLVFTSSAAIYGDYEKKITETSPTVPTSVYGSTKLTGEQ 151
Query: 213 QVEKYISENFSNWASFRPQYMIGSGNNK---DCEEWFFDRIVRKRPVPIPGSGMQFTNIA 269
+ Y S N + RP + G N F DR+ +P I G+G Q +
Sbjct: 152 YCKIYSSLFGINITALRPFNIYGPRQNDAYAGVISKFMDRLNENKPPIIFGNGKQTRDFI 211
Query: 270 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK---LCAQAAGLPVEIVHYDPK 326
HV D++ LA++ + S ++FNL + ++ +++ +++ L A +GL + +H
Sbjct: 212 HVDDVAQAFYLALKY-KKKSFDVFNLATGKSTSINELSEIFLLAANKSGL--KTIH---- 264
Query: 327 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 368
KK+ P +H P K L + T L + + +
Sbjct: 265 ------KKSIPGVVVHSSTNPNKIKQNLHFTPTIGLKDGITK 300
>gi|111023767|ref|YP_706739.1| UDP-galactose 4-epimerase [Rhodococcus jostii RHA1]
gi|397737301|ref|ZP_10503973.1| UDP-glucose 4-epimerase [Rhodococcus sp. JVH1]
gi|419965927|ref|ZP_14481862.1| UDP-glucose 4-epimerase [Rhodococcus opacus M213]
gi|432340391|ref|ZP_19589833.1| UDP-glucose 4-epimerase [Rhodococcus wratislaviensis IFP 2016]
gi|110823297|gb|ABG98581.1| UDP-galactose 4-epimerase [Rhodococcus jostii RHA1]
gi|396926740|gb|EJI93977.1| UDP-glucose 4-epimerase [Rhodococcus sp. JVH1]
gi|414568601|gb|EKT79359.1| UDP-glucose 4-epimerase [Rhodococcus opacus M213]
gi|430774584|gb|ELB90170.1| UDP-glucose 4-epimerase [Rhodococcus wratislaviensis IFP 2016]
Length = 330
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 116/289 (40%), Gaps = 55/289 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G + LL GHEV I + D ++ P G + V GD AE
Sbjct: 6 TGGAGYVGSVCSTVLLERGHEVVI--IDDLSTGNADAVPL---------GAEFVEGDVAE 54
Query: 144 VGNVVGGVT----FDVVLDNNGKNL--DAVR-PVADW-------------AKSSGVKQFL 183
V + V G + FD VL ++L ++V+ P W + SG ++ +
Sbjct: 55 VVSDVLGTSGTPRFDGVLHFAAQSLVGESVQYPEKYWRGNVVTTLELLEAMRHSGTRKLV 114
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIG 235
F S+A Y + P E D +P + + I ++++ S R + G
Sbjct: 115 FSSTAATYGEPEHSPITEADPTRPTNPYGATKLAIDHAITSYSVAHSLAATSLRYFNVAG 174
Query: 236 S----GNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTL 280
+ G N+ E +++ + + I G+ G + HV DL+ L
Sbjct: 175 AYKSAGENRVVETHLIPLVLQVALGQREKISIFGTDWPTPDGTAIRDYIHVLDLAEAHVL 234
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
A+E+ I+NL S ++ + CA+ GLP+ V P+ AG
Sbjct: 235 ALESSIEGRHRIYNLGSGAGFSVREVISACARVTGLPIA-VEDAPRRAG 282
>gi|218135292|ref|ZP_03464096.1| hypothetical protein BACPEC_03197 [[Bacteroides] pectinophilus ATCC
43243]
gi|217990677|gb|EEC56688.1| NAD dependent epimerase/dehydratase family protein [[Bacteroides]
pectinophilus ATCC 43243]
Length = 290
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 18/161 (11%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 222
N + +AD+AK++GV F++ISS + P E VKP A KY E
Sbjct: 85 NCLGTQNIADFAKTAGVSCFVYISSVPVIGIPQYVPITEKHPVKP-ATVYHYTKYFGEQI 143
Query: 223 SN--------WASFRPQYMIGSG--NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ R +G G +NK F R + +P+ I G+GM+ N VR
Sbjct: 144 VQGLGACGIRYGCLRIPSPVGCGMPDNK-IFSVFVKRCLENQPLQIYGNGMRVQNYLDVR 202
Query: 273 DLSSMLTLAVENPEAASSNIF-NLVSDRAVTLDGMAKLCAQ 312
DL+ + +E+ NI N +SD +A+LC +
Sbjct: 203 DLTCAVDRFIESDANGVYNIAGNSISDME-----LAELCKE 238
>gi|302873798|ref|YP_003842431.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans
743B]
gi|307689961|ref|ZP_07632407.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans
743B]
gi|302576655|gb|ADL50667.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans
743B]
Length = 317
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 95/226 (42%), Gaps = 25/226 (11%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYK-----PADEPPHVEGDVVKPDAGHVQVE-- 215
N+ V + + + V++ ++ SSA +Y P DE VE + H
Sbjct: 93 NIIGTINVLECCRETKVRKIIYPSSAAVYGNPKYLPVDENHPVEPISFYGISKHTPCHYI 152
Query: 216 KYISENFS-NWASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAH 270
K SE ++ + FR + G + E F +R++RK I G G Q + +
Sbjct: 153 KAYSELYNIKYTIFRYANVYGPRQDNHGEGGVVSIFANRLLRKETCYIYGDGKQTRDFIY 212
Query: 271 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 330
V+D+++ LA++ + I ++ S++ VT++ + K+ + + V + + + + I
Sbjct: 213 VKDVANANVLALDR---GDNEIIDISSNKPVTINQLHKVMKEISKCSVAVEYKEARNGDI 269
Query: 331 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI 376
+H Y A LGW+ ++ LKE Y +
Sbjct: 270 ----------LHSYLSNEKASGCLGWKDKHDIKSGLKETLNYYYNV 305
>gi|301101235|ref|XP_002899706.1| dTDP-D-glucose 4,6-dehydratase, putative [Phytophthora infestans
T30-4]
gi|262102708|gb|EEY60760.1| dTDP-D-glucose 4,6-dehydratase, putative [Phytophthora infestans
T30-4]
Length = 421
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 108/261 (41%), Gaps = 36/261 (13%)
Query: 152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA--DEPPHVEGDVVKPDA 209
+F +D + N+ + + A+ G+K+F+ +S+ +Y D E V++P
Sbjct: 165 SFGNSIDFSKTNILGTHVLLEAARLYGIKRFIHVSTDEVYGEGRPDSARMTEDHVLEPTN 224
Query: 210 GHVQVE---KYISENFSNWASFRPQYMIGSGNNKDCEEWF--------FDRIVRKRPVPI 258
+ + +++ ++F SF +I NN + ++I+R RPV I
Sbjct: 225 PYAATKAGAEFLVKSFHR--SFGLPTIITRSNNVYGPHQYPEKLVPKIINQILRDRPVTI 282
Query: 259 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL-----VSDRAVTLDGMAKLCAQA 313
G GM N ++ D+ + L + E ++N+ +S+R V +D +A + Q
Sbjct: 283 HGDGMHTRNYLYISDVVAAFDLILH--EGKVGEVYNIGGENELSNRLVAMDLLAMMKPQL 340
Query: 314 AGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 373
G KA I + PF N H Y A LGW E L++ + +
Sbjct: 341 VGA--------DKAILITHVQDRPF-NDHRYVIDSAKIRRLGWNEKVTWREGLRKTVKWF 391
Query: 374 VKIGRDKKAMQFEIDDKILES 394
+ G +F+ D LE+
Sbjct: 392 CRYGH-----RFDNIDHALEA 407
>gi|163789343|ref|ZP_02183784.1| hypothetical protein FBALC1_05263 [Flavobacteriales bacterium
ALC-1]
gi|159875411|gb|EDP69474.1| hypothetical protein FBALC1_05263 [Flavobacteriales bacterium
ALC-1]
Length = 391
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 127/317 (40%), Gaps = 45/317 (14%)
Query: 30 RLSFSSYSHLSSL-VSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHA 88
R +F L+S+ + + S+ ++C + +++ A T ++K +LI+ GG +
Sbjct: 7 RRTFIKKGALASIAIPLLGSNLISCKSETQKEPNEAKT----ESKKLSILIL----GGTS 58
Query: 89 VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVV 148
+G + + GH+V+ T G + + F++ +++ GD +
Sbjct: 59 FLGPHQVAYAISRGHKVSTFTRG-KTKPTVHAEIFDQVEQLI--------GDRENNLKAL 109
Query: 149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP--------------- 193
+DVV+DN+G+ ++ + A+ K + V +++ SS G+Y P
Sbjct: 110 ENRKWDVVIDNSGRKVEWTKATANLLKDN-VGMYMYTSSTGVYYPYLTDNISEETKLVLS 168
Query: 194 ------ADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
DE E V+K G+ ++E + RP YMIG + D +
Sbjct: 169 MPEGLTEDEQYEQEYGVMK---GNSELEAIKAFGKERTIVVRPTYMIGPADKTDRFIHWP 225
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
R+ + + +P VRD++ EN + + N + A T+
Sbjct: 226 IRLAKGGEILVPSKKEDPVQYVDVRDIAEWFIRLAENQQHGTYN--GVGPKDAQTMQEFV 283
Query: 308 KLCAQAAGLPVEIVHYD 324
K AQ+ + V D
Sbjct: 284 KQAAQSFDVKSSFVMVD 300
>gi|443468808|ref|ZP_21059015.1| UDP-glucose 4-epimerase [Pseudomonas pseudoalcaligenes KF707]
gi|442898027|gb|ELS24844.1| UDP-glucose 4-epimerase [Pseudomonas pseudoalcaligenes KF707]
Length = 309
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 117/292 (40%), Gaps = 32/292 (10%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIVS--------- 131
+GG IG +LA LL GH V ++ + G ++ + P V+
Sbjct: 9 TGGAGFIGSHLADALLARGHAVRVLDNLSTGKRDNLALDNPRLELIEGDVADAALVARAM 68
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
AG K V A V +V V D + + N V + + GVK+ LF SSA +Y
Sbjct: 69 AGCKGV-AHLAAVASVQASV--DDPVATHQSNFIGTLNVCEAMRQQGVKRVLFASSAAVY 125
Query: 192 KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW---------ASFRPQYMIG-----SG 237
E ++ D K V+K SE + ++ A FR + G S
Sbjct: 126 GQNGEGRAIDEDTPKSPLTPYAVDKLASEQYLDFYRRQHGLEPAVFRFFNIFGPRQDPSS 185
Query: 238 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
F +R + P+ + G G Q + +V DL +L A+E + N+
Sbjct: 186 PYSGVISIFTERALAGTPITVFGDGEQTRDFVYVGDLVQVLVQALEQ-DWLEVGAVNVGL 244
Query: 298 DRAVTL-DGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPR 348
++A +L + +A + GLP I H + +A I +A R + Y P+
Sbjct: 245 NQATSLKELLAAIGDVLGGLP-PITHAEARAGDIRHSRANNARLLLRYDFPK 295
>gi|399007072|ref|ZP_10709588.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM17]
gi|398121029|gb|EJM10672.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM17]
Length = 310
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 130/330 (39%), Gaps = 58/330 (17%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K+VL+ +GG IG +L LL G+ V ++ D ++ K+ P + A
Sbjct: 4 KRVLV----TGGAGFIGSHLVDALLARGYAVRVLD--DLSTGKVSNLPMD------CAAL 51
Query: 135 KTVWGDPAEVGNV---VGGVTFDVVLD--------------NNGKNLDAVRPVADWAKSS 177
K V GD A+ + + G + V L + N V + ++
Sbjct: 52 KLVVGDVADAATLTEAMQGCSAVVHLAAVASVHASVEHPAATHRSNFIGTLRVCEAMIAA 111
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS- 236
G+++ +F SSA +Y E ++ D +K SE++ N+ +R Q+ +
Sbjct: 112 GIRRVVFASSAAVYGNNGEGTPIDEDTPTSPLTPYAADKLSSEHYLNF--YRRQHGLEPV 169
Query: 237 --------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
G +D F +R RP+ + G G Q + +V DL +L
Sbjct: 170 ILRFFNIFGPRQDPLSPYSGVISIFSERAKTGRPIVVFGDGEQTRDFVYVEDLVKILLQG 229
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
+E+P+ A ++ N+ TL+ + + +G P+ + H ++ I
Sbjct: 230 LEHPQPA-ADATNVGLGGVTTLNDLITALERISGKPLSVSHAAARSGDI----------R 278
Query: 342 HFYAEPRAAKDILGWRSTTNLPEDLKERFE 371
H A+ R ++ G S T + E L +
Sbjct: 279 HSKADNRRLRERFGLGSPTTVAEGLARLYH 308
>gi|419800059|ref|ZP_14325370.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus parasanguinis F0449]
gi|385696428|gb|EIG26916.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus parasanguinis F0449]
Length = 325
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 103/254 (40%), Gaps = 42/254 (16%)
Query: 111 GDENSDKMKKPPFNRFNEIVSAGG-KTVWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAV 167
GD ++ + + F + +V AG T WG NVVG
Sbjct: 50 GDLSAIEEVRQAFQSVDAVVHAGALSTAWGPWKAFYQANVVG-----------------T 92
Query: 168 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHV-EGDVVKPDAGHVQ---VEKYISEN-F 222
+ V D + VK+ +++SS IY + ++ E D P H+ K SE F
Sbjct: 93 QNVLDLCREYAVKRLVYVSSPSIYAAGKDQLNIKESDA--PKENHLNNYIRSKLASEKLF 150
Query: 223 SNWAS-----FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 277
S+++ RP+ + G G+ R+ RK +P+ G Q ++ V +++
Sbjct: 151 SDYSDVPSIILRPRGLFGVGDTSILPRVL--RLSRKIGIPLIRGGEQLMDMTCVENVALA 208
Query: 278 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP 337
+ LA+E E A ++N+ + T + + + G P+ Y AG+ A A+
Sbjct: 209 IRLALEAKE-AHGQVYNITNGEPKTFKYLIETTLKGLGEPIR---YRKIPAGLVASAAYS 264
Query: 338 ----FRNMHFYAEP 347
+R H AEP
Sbjct: 265 LEGVYRLFHLKAEP 278
>gi|306825999|ref|ZP_07459335.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus sp. oral taxon
071 str. 73H25AP]
gi|304431715|gb|EFM34695.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus sp. oral taxon
071 str. 73H25AP]
Length = 326
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 138/351 (39%), Gaps = 77/351 (21%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-------------TV----GDENSDK 117
KKVL+ +G +G Y+ +EL SG++V TV GD +
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQSGYQVRAFGRNSKVGQSLETSTVAFFQGDLTKHE 57
Query: 118 MKKPPFNRFNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ +V AG TVWG +D N+ + V + +
Sbjct: 58 DLAQACQEMDMVVHAGALSTVWGP---------------WVDFYQTNVLGTKYVLEACQE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P D+ E + + + ++ YI ++ F
Sbjct: 103 TGIQRLVYVSSPSIYAAPRDQLAIKESEAPQEN----KLNNYIRSKLASEKLFEDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 159 SIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAFPFRNMHF 343
P+ AS ++N+ + + + + G P+ P + I + F +R +
Sbjct: 217 PQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPITYRKVPAPLLSVIASSLEFLYRVLKL 275
Query: 344 YAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 375
EP +A +D LG+R ++ E +++ ++Y K
Sbjct: 276 KGEPALTRYTYYLLRYSQTLDISKAERD-LGYRPQISISEGIEQYVQDYRK 325
>gi|424852220|ref|ZP_18276617.1| UDP-glucose 4-epimerase [Rhodococcus opacus PD630]
gi|356666885|gb|EHI46956.1| UDP-glucose 4-epimerase [Rhodococcus opacus PD630]
Length = 327
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 116/289 (40%), Gaps = 55/289 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G + LL GHEV I + D ++ P G + V GD AE
Sbjct: 3 TGGAGYVGSVCSTVLLERGHEVVI--IDDLSTGNADAVPL---------GAEFVEGDVAE 51
Query: 144 VGNVVGGVT----FDVVLDNNGKNL--DAVR-PVADW-------------AKSSGVKQFL 183
V + V G + FD VL ++L ++V+ P W + SG ++ +
Sbjct: 52 VVSDVLGTSGIPRFDGVLHFAAQSLVGESVQYPEKYWRGNVVTTLELLEAMRHSGTRKLV 111
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIG 235
F S+A Y + P E D +P + + I ++++ S R + G
Sbjct: 112 FSSTAATYGEPEHSPITEADPTRPTNPYGATKLAIDHAITSYSVAHSLAATSLRYFNVAG 171
Query: 236 S----GNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTL 280
+ G N+ E +++ + + I G+ G + HV DL+ L
Sbjct: 172 AYKSAGENRVVETHLIPLVLQVALGQREKISIFGTDWPTPDGTAIRDYIHVLDLADAHVL 231
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
A+E+ I+NL S ++ + CA+ GLP+ V P+ AG
Sbjct: 232 ALESSIEGRHRIYNLGSGAGFSVREVISACARVTGLPIA-VEDAPRRAG 279
>gi|284048368|ref|YP_003398707.1| NAD-dependent epimerase/dehydratase [Acidaminococcus fermentans DSM
20731]
gi|283952589|gb|ADB47392.1| NAD-dependent epimerase/dehydratase [Acidaminococcus fermentans DSM
20731]
Length = 305
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 18/176 (10%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 222
N+ + V + + SGV+Q +F SSA IY P +E +V P + + + K + E++
Sbjct: 94 NVTGLVHVLEGCRKSGVEQIIFSSSAAIYGDNQNLPLLETEVPAPTSFY-GLSKAVGEDY 152
Query: 223 SNWAS---------FRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIA 269
S FR + G + E F +I RK PV + G G Q +
Sbjct: 153 IRLYSRCFGLKHIIFRFANVYGERQGETGEGGVISVFARKIARKEPVTVFGDGNQTRDFV 212
Query: 270 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDP 325
+ D++ ++L V A+ N+ ++ V+L+ + + G ++ VHY P
Sbjct: 213 YAGDIARAMSLGVGYAGCAT---LNVSTNEEVSLNQLIGTMEKILGHKMD-VHYGP 264
>gi|343083404|ref|YP_004772699.1| NAD-dependent epimerase/dehydratase [Cyclobacterium marinum DSM
745]
gi|342351938|gb|AEL24468.1| NAD-dependent epimerase/dehydratase [Cyclobacterium marinum DSM
745]
Length = 317
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 104/250 (41%), Gaps = 49/250 (19%)
Query: 162 KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY---- 217
+N+ + +++ GV++F+F+ S+ IY P P ++ D + + E Y
Sbjct: 84 ENMLIQNNLINYSHQFGVEKFIFLGSSCIY-PKLAPQPLKEDSLLTSSLEPTNEWYALAK 142
Query: 218 ---------ISENFS-NWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVP 257
I + F ++ S P + G +N D E ++RK PV
Sbjct: 143 ITGVKACDAIRKQFGKDFISLMPTNLYGPYDNFDLETSHVLPAMIRKFHEAKENGNSPVT 202
Query: 258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 317
+ GSG HV D++ + AVEN + N++N+ + + +T+ +A+L + G
Sbjct: 203 LWGSGSPMREFLHVNDMADAVVFAVEN--SFKDNLYNVGTGKDLTIKSLAELIQKITGHT 260
Query: 318 VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEE 372
EI K G PR D+ GW++ L E +KE +E
Sbjct: 261 GEIEWDSEKPDGT----------------PRKLMDVSKMSDAGWQAKIGLEEGVKETYEW 304
Query: 373 YV-KIGRDKK 381
++ IG+ K+
Sbjct: 305 FLNNIGQYKQ 314
>gi|452965528|gb|EME70550.1| nucleoside-diphosphate-sugar epimerase [Magnetospirillum sp. SO-1]
Length = 332
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 117/287 (40%), Gaps = 51/287 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-----AGGKTVW 138
+GG +G L +LL +GH+VT++ + E+ AG + +
Sbjct: 11 TGGAGYVGSVLVPKLLEAGHKVTVLD-------------LYLYGEVFEGLKGHAGLREIK 57
Query: 139 GDPAEVGNVVGGVT-FDVVLD--------------NNGK--NLDAVRPVADWAKSSGVKQ 181
GD ++ V ++ D V+ N G+ N DA RP+ AK +GV++
Sbjct: 58 GDIRDISKVEEALSGCDAVIHLACISNDPSYDLDPNLGRSINHDAFRPLVQAAKRAGVER 117
Query: 182 FLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS-------NWASFRPQYMI 234
F++ SS+ +Y DEP E ++P + + + + + RP +
Sbjct: 118 FIYASSSSVYGIKDEPEVTEDLSLEPLTDYSRFKALCEQELLEERAPGFTVCTIRPSTVC 177
Query: 235 GSGNNKDCE---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA-SS 290
G + + F ++ V + + G + NI H+ D++++ ++ P
Sbjct: 178 GFAPRQRLDVVVNIFTNQAVNNGKIRVTGGPQKRPNI-HIEDMAAVYLYLLDQPAGKIDG 236
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY---DPKAAGIDAKK 334
I+N D + +A++ + G VEI DP++ + KK
Sbjct: 237 KIWN-AGDTNFPISQLAEIVRKVVGEHVEIETLPTNDPRSYHVSGKK 282
>gi|116668831|ref|YP_829764.1| NAD-dependent epimerase/dehydratase [Arthrobacter sp. FB24]
gi|116608940|gb|ABK01664.1| NAD-dependent epimerase/dehydratase [Arthrobacter sp. FB24]
Length = 338
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 109/271 (40%), Gaps = 29/271 (10%)
Query: 65 FTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN 124
++ A+ A +L + GG VI A+ + GH +TI+ N K P
Sbjct: 1 MSLPATVAAPSDILFI----GGTGVISAAAAEHAVALGHRLTIL-----NRGKSAGRPTP 51
Query: 125 RFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLD-AVRPVADWAKSSGVKQFL 183
E+V+A + D A V + G TFD V D + A + ++ +G Q++
Sbjct: 52 EGAEVVTADIR----DSAAVREALRGRTFDAVADFISFTPEHAAAAIEQFSGRTG--QYV 105
Query: 184 FISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS---------FRPQYM 233
FISSA Y KP P +E ++ +K E+ A RP +
Sbjct: 106 FISSASAYQKPPARLPILESTPLRNPFWQYSRDKIACEDLLMRAYRDDGFPVTVVRPSHT 165
Query: 234 IGSGNNKDCEEWF-FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
W R+ PV + G G + H RD + ++ P+A +
Sbjct: 166 YDRTKIALLGGWTDIHRMREGLPVLVHGDGTSLWTLTHSRDFAKAFVGLLDRPQAVGES- 224
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPV-EIVH 322
+ + SD + D + +L A+AAG+ E+VH
Sbjct: 225 YTITSDEFLPWDQVYRLFARAAGVAEPELVH 255
>gi|218897455|ref|YP_002445866.1| NAD-dependent epimerase/dehydratase [Bacillus cereus G9842]
gi|228905448|ref|ZP_04069402.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis IBL
4222]
gi|228968976|ref|ZP_04129920.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|402560312|ref|YP_006603036.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis HD-771]
gi|434375424|ref|YP_006610068.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis HD-789]
gi|218541889|gb|ACK94283.1| NAD-dependent epimerase/dehydratase [Bacillus cereus G9842]
gi|228790720|gb|EEM38377.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228854180|gb|EEM98884.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis IBL
4222]
gi|401788964|gb|AFQ15003.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis HD-771]
gi|401873981|gb|AFQ26148.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis HD-789]
Length = 307
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 111/273 (40%), Gaps = 25/273 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG ++ KELL G+EV I DK K F EI T+ + +V
Sbjct: 7 GGSGFIGKHVTKELLARGYEVVIF-------DKFKPSIDVPFKEIDILDIATLRENLIDV 59
Query: 145 GNVVGGVTFDVVLDN---NGK-----NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE 196
V+ V +DN N + N + + + +G+++ LF SS+ +Y
Sbjct: 60 DGVIHLAAL-VGVDNCRLNEEDVVRVNFEGTKNIVQVCNENGIEKLLFSSSSEVYGDGVS 118
Query: 197 PPHVEGDVVKPDAGH----VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
P E D+ P + + + E Y+ E SN R ++ + + + ++
Sbjct: 119 VPFKENDIKIPKSAYGKAKLMSEDYLKEYASNSLKIRVVRYFNVYGSQQNDNFVISKFLK 178
Query: 253 K----RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
+ + I G G Q +++ D+ + LA E E + FN+ +++ ++++ +A
Sbjct: 179 QAHSGEDITIYGDGQQIRCFSYISDIVNGTILAFE-YEGENFADFNIGNNKPISMEELAI 237
Query: 309 LCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
+ G +I D G+ FR +
Sbjct: 238 KINELMGNKSKIKFLDLGEEGVRNSSIEIFRRI 270
>gi|373854258|ref|ZP_09597056.1| NAD-dependent epimerase/dehydratase [Opitutaceae bacterium TAV5]
gi|372472125|gb|EHP32137.1| NAD-dependent epimerase/dehydratase [Opitutaceae bacterium TAV5]
Length = 324
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 103/245 (42%), Gaps = 18/245 (7%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +LA LL G +VT + + + + + K F + + +T+ P +
Sbjct: 8 GGEGFIGRHLADRLLNDGQQVTSVDLAESDRREGIKRRFVTADVRGTLTFETLEASPPVL 67
Query: 145 GNV--VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
N+ V D NL+ V D+A+ +GV+ +F SS Y A E E
Sbjct: 68 FNLAAVHRTPGHPNRDYFDANLNGAENVCDFARKTGVRTIVFTSSIAPYG-ASEELKTEE 126
Query: 203 DVVKPDAGHVQVEKYISENF-SNWAS----------FRPQYMIGSGNNKDCEEWFFDRIV 251
+ P+ + + K ++E+ W + RP + G G + ++ +
Sbjct: 127 TLPTPNTAY-GISKLVAEHIHRRWQAEKPSERRLVIVRPGVVFGHGEKGNVTRLYW--AL 183
Query: 252 RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 311
R++ PG +V+D++++L E PE+ ++NL + A T+ + + +
Sbjct: 184 RRKRFAYPGRTDTIKASIYVKDVAALLAEMSERPESGVF-VYNLTYEPAPTIKDICTVMS 242
Query: 312 QAAGL 316
G+
Sbjct: 243 TVTGV 247
>gi|409730170|ref|ZP_11271760.1| NAD-dependent epimerase/dehydratase [Halococcus hamelinensis 100A6]
gi|448722601|ref|ZP_21705134.1| NAD-dependent epimerase/dehydratase [Halococcus hamelinensis 100A6]
gi|445789026|gb|EMA39719.1| NAD-dependent epimerase/dehydratase [Halococcus hamelinensis 100A6]
Length = 325
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 122/320 (38%), Gaps = 42/320 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + +EL ++VT+ G+ + PF + G +T DP +
Sbjct: 7 GGTRFIGRHTVEELRSHDYDVTVFNRGNHEN------PFETVEHVT--GDRT---DPEAL 55
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
+ + DVV+D + D VR D + ++ ISS Y D P E +
Sbjct: 56 EDAAQRIDPDVVVDCVAYHPDEVRHAVD--AFADANAYVVISSGAAYG-IDAIPKREDET 112
Query: 205 VKPDAGHVQVEKYISENFS------------------NWASFRPQYMIGSGNNKDCEEWF 246
+ Q E + N S RP + G + + ++
Sbjct: 113 RLHECTDEQATDDSWETYGPRKAAIDRVVAAAGEAGVNAMSVRPPVVYGPHDYTERFGYW 172
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
DR+ V +PG G ++ V D++S L E+ ++ S +N+ R L+
Sbjct: 173 VDRVANHDRVVVPGDGDGLRHMVFVEDVASALVRVAEHGDSGES--YNVGDRRLPILEEW 230
Query: 307 AKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPE 364
L A A VE+V + + AA A + FP + + A LGW +T E
Sbjct: 231 VGLVADALDTEVEVVTANARELAAADLAPEDFPLHLDYPHVLSTAKLAALGWEATP--IE 288
Query: 365 DLKER----FEEYVKIGRDK 380
D +R F E + GR+
Sbjct: 289 DALDRTVRAFRESERTGREN 308
>gi|70732834|ref|YP_262601.1| NAD-dependent epimerase/dehydratase [Pseudomonas protegens Pf-5]
gi|68347133|gb|AAY94739.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas
protegens Pf-5]
Length = 309
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 108/272 (39%), Gaps = 31/272 (11%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFN------EIVSAG- 133
+GG IG +LA LL G+ V ++ + G ++ + P +VS
Sbjct: 9 TGGAGFIGSHLADALLAKGYAVRVLDDLSTGKPSNLPLADPRVELIEGNVADASLVSQAM 68
Query: 134 -GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
G A V +V V D + + N V + + GVK+ LF SSA +Y
Sbjct: 69 QGCCAVAHLAAVASVQASV--DDPVQTHQSNFIGTLNVCEAMREHGVKRVLFASSAAVYG 126
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNW---------ASFRPQYMIG-----SGN 238
E ++ D K +K SE++ ++ A FR + G S
Sbjct: 127 NNGEGQSIDEDTAKAPLTPYASDKLASEHYLDFYRRQHGLEPAIFRFFNIFGPRQDPSSP 186
Query: 239 NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
F +R + P+ + G G Q + +V DL +L A+E P+ + N+ +
Sbjct: 187 YSGVISIFSERAQQGLPITVFGDGEQTRDFVYVGDLVQVLVQAIEAPQLEVGAV-NVGLN 245
Query: 299 RAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+A TL M A+ G LP + Y P AG
Sbjct: 246 QATTLKQMLAALAEVVGALPP--ISYGPARAG 275
>gi|160940253|ref|ZP_02087598.1| hypothetical protein CLOBOL_05142 [Clostridium bolteae ATCC
BAA-613]
gi|158436833|gb|EDP14600.1| hypothetical protein CLOBOL_05142 [Clostridium bolteae ATCC
BAA-613]
Length = 337
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 106/261 (40%), Gaps = 44/261 (16%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---P 141
GG I +A + G EVT++ NR ++ V G +++ D
Sbjct: 7 GGTGTISTAVAALAMDKGWEVTLL---------------NRGSKPVPEGMESMVADIHDE 51
Query: 142 AEVGNVVGGVTFDVVLDNNGKNL-DAVRPVADWAKSSGVKQFLFISSAGIY-KPADEPPH 199
A V ++ G T+DVV D R + + + + +Q++FISSA Y KPA P
Sbjct: 52 AAVARIMEGRTYDVVAQFIAYGAEDVQRDIRLFQEKT--RQYIFISSASAYQKPAAGCPI 109
Query: 200 VEGD-VVKP---------DAGHVQVEKYISENF--------SNWASFRPQYMIGSGNNKD 241
E ++ P DA V Y F + +P I G+ +
Sbjct: 110 TESTPLINPYWEYSRKKIDAEEVLTAAYRKNGFPVTIVRPSHTYDGKKPPVAI-HGHKGN 168
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
+ RI+ +PV IPG G + H D + + NP A N +++ SD ++
Sbjct: 169 WQ--ILKRILEGKPVIIPGDGTSLWTLTHSADFARGYVGLMGNPHAI-GNAYHITSDESM 225
Query: 302 TLDGMAKLCAQAAGLPVEIVH 322
T + + + A+A P+ +H
Sbjct: 226 TWNQIYETLAEALDRPLNALH 246
>gi|116621061|ref|YP_823217.1| NAD-dependent epimerase/dehydratase [Candidatus Solibacter usitatus
Ellin6076]
gi|116224223|gb|ABJ82932.1| NAD-dependent epimerase/dehydratase [Candidatus Solibacter usitatus
Ellin6076]
Length = 356
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 115/276 (41%), Gaps = 34/276 (12%)
Query: 54 PASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE 113
P++S R +S T++ S +V+I+ GG IG YL L+ +GH V ++ G
Sbjct: 19 PSASVRQWLSCRTMEISL---MRVVII----GGSGHIGSYLTPRLVEAGHSVFCVSRG-- 69
Query: 114 NSDKMKKP-----PFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVR 168
+K+P + R +V ++V G + + D V+D ++
Sbjct: 70 ----LKQPYVEHVAWKRVESVVL--DRSVEEAAGTFGGKIRDLEPDCVIDLTAYTRESTE 123
Query: 169 PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYISENFSN 224
+ + A V+QFL + ++ P E P E +P + + ++E Y+ E
Sbjct: 124 QLVE-ALRGRVQQFLHCGTIWVHGPTVEAPVAEDQPRRPISEYGVRKAEIEAYLLEEARR 182
Query: 225 W----ASFRPQYMIGSG-----NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS 275
P +++G G + F + R + +P G + + H D++
Sbjct: 183 HEFPATVLHPGHLVGMGWVPLNPAANFNPAVFADLAAGREIVLPNLGRETLHHVHADDVA 242
Query: 276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 311
A+++ AA F++VS AV++ G A+ A
Sbjct: 243 QAFVQAMDHWPAAVGECFHVVSPAAVSMAGYAEAVA 278
>gi|387879545|ref|YP_006309848.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus parasanguinis
FW213]
gi|386792998|gb|AFJ26033.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus parasanguinis
FW213]
Length = 325
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 62/316 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK-----------------KPPFNRF 126
+G +G Y+ ELL + + ++N ++ + F
Sbjct: 6 TGATGFLGKYVIDELLAHDYSIVAFGRNEKNGKALENDRVQFMKGDLSAIEELRQAFQSV 65
Query: 127 NEIVSAGG-KTVWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL 183
+ +V AG T WG NVVG + V D + VK+ +
Sbjct: 66 DAVVHAGALSTAWGPWKAFYQANVVG-----------------TQNVLDLCREYAVKRLV 108
Query: 184 FISSAGIYKPADEPPHV-EGDVVKPDAGHVQ---VEKYISEN-FSNWAS-----FRPQYM 233
++SS IY + ++ E D P H+ K SE FS+++ RP+ +
Sbjct: 109 YVSSPSIYAAGKDQLNIKESDA--PKENHLNNYIRSKLASEKLFSDYSDVPSIILRPRGL 166
Query: 234 IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
G G+ R+ RK +P+ G Q ++ V +++ + LA+E E A ++
Sbjct: 167 FGVGDTSILPRVL--RLSRKIGIPLIRGGEQLMDMTCVENVALAIRLALEAKE-AHGQVY 223
Query: 294 NLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP----FRNMHFYAEP-- 347
N+ + T + + + G P+ Y AG+ A A+ +R H AEP
Sbjct: 224 NITNGEPKTFKYLIETTLKGLGEPIR---YRKIPAGLVAGVAYSLEGVYRFFHLKAEPPL 280
Query: 348 -RAAKDILGWRSTTNL 362
R +L + T ++
Sbjct: 281 TRYTYYLLRYSQTLDI 296
>gi|108804076|ref|YP_644013.1| NAD-dependent epimerase/dehydratase [Rubrobacter xylanophilus DSM
9941]
gi|108765319|gb|ABG04201.1| NAD-dependent epimerase/dehydratase [Rubrobacter xylanophilus DSM
9941]
Length = 331
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 79/206 (38%), Gaps = 18/206 (8%)
Query: 182 FLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSNWA------SFRPQ 231
F+F SS G EPP EG +P AG + E Y S + + F
Sbjct: 130 FVFASS-GAAAGEVEPPIHEGVCPRPVSPYGAGKLAGEAYCSAYWRTYGLETVALRFGNV 188
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
Y GSG+ F R R + I G G Q + ++ DL L LA
Sbjct: 189 YGPGSGHKNSVVARFIRRAARGEVLEIYGDGTQTRDFIYIDDLVRALRLAA-TAGGVGGE 247
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAK 351
+F + + ++ + +L LPV + K ++ P YA+ A+
Sbjct: 248 VFQIATGSETSVGEVVELL-----LPV-LAAAGIKGVRVERASPRPGDVARNYADTSKAR 301
Query: 352 DILGWRSTTNLPEDLKERFEEYVKIG 377
+LGWR+ L E L+ +++ G
Sbjct: 302 RLLGWRAEVGLEEGLRRTVGWFLERG 327
>gi|312866557|ref|ZP_07726772.1| NAD dependent epimerase/dehydratase family protein [Streptococcus
parasanguinis F0405]
gi|311097856|gb|EFQ56085.1| NAD dependent epimerase/dehydratase family protein [Streptococcus
parasanguinis F0405]
Length = 325
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 123/318 (38%), Gaps = 66/318 (20%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVG-------------------DENSDKMKKPPFN 124
+G +G Y+ ELL H+ TI+ G D +S + + F
Sbjct: 6 TGATGFLGKYVIDELLA--HDYTIVAFGRNEKIGKALESERVQFIKGDLSSIEELRQAFQ 63
Query: 125 RFNEIVSAGG-KTVWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQ 181
+ +V AG T WG NVVG + V D + VK+
Sbjct: 64 SVDAVVHAGALSTAWGPWKAFYQANVVG-----------------TQNVLDLCREYAVKR 106
Query: 182 FLFISSAGIYKPADEPPHV-EGDVVKPDAGHVQ---VEKYISEN-FSNWAS-----FRPQ 231
+++SS IY + ++ E D P H+ K SE FS++ RP+
Sbjct: 107 LVYVSSPSIYAAGKDQLNIKESDA--PTENHLNNYIRSKLASEKLFSDYPDVPSIILRPR 164
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G G+ R+ RK +P+ G Q ++ V +++ + LA+E + A
Sbjct: 165 GLFGVGDTSILPRVL--RLSRKIGIPLIRGGEQLMDMTCVENVALAIRLALEAKD-AHGQ 221
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP----FRNMHFYAEP 347
++N+ + T + + + G P+ Y AG+ A A+ +R H AEP
Sbjct: 222 VYNITNGEPKTFKYLIETTLKGLGEPIR---YRKLPAGLVAGAAYSLEEVYRFFHLKAEP 278
Query: 348 ---RAAKDILGWRSTTNL 362
R +L + T ++
Sbjct: 279 PLTRYTYYLLRYSQTLDI 296
>gi|347531318|ref|YP_004838081.1| hypothetical protein RHOM_05150 [Roseburia hominis A2-183]
gi|345501466|gb|AEN96149.1| hypothetical protein RHOM_05150 [Roseburia hominis A2-183]
Length = 296
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 43/226 (19%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEI 129
EK+ ++V GG G +L ELL GHEVTI T G D+ D++++ +R
Sbjct: 2 EKRMNILV---LGGTGFFGKHLVWELLHRGHEVTIATRGRTPDDFGDRVRRLIVDR---- 54
Query: 130 VSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
D ++ V +DV D+ VR V + + ++++ +SSA
Sbjct: 55 ---------TDVRQMEQVFAHKYYDVFYDDLAYCAGDVRTVLE---AVPCRRYVMVSSAS 102
Query: 190 IY-------KPADEPPHVE----------GDVVKPDAGHVQVEKYISENFSNWASFRPQY 232
+Y + EP H DV+K A V++Y N A R Y
Sbjct: 103 VYDLHFQTVETDYEPEHDRLVWYTDYSGSYDVLKKSAECALVQQY---PMKNAAFVRFPY 159
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 278
+IG + D ++ + +VR++P+ I Q + I+ V D +L
Sbjct: 160 VIGRDDYTDRLYFYVEHVVRQKPMYIDNMDAQMSFIS-VDDAGRLL 204
>gi|158316985|ref|YP_001509493.1| NAD-dependent epimerase/dehydratase [Frankia sp. EAN1pec]
gi|158112390|gb|ABW14587.1| NAD-dependent epimerase/dehydratase [Frankia sp. EAN1pec]
Length = 368
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 109/269 (40%), Gaps = 46/269 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVL+V GG G ++ + LLG GH+VTI G +PP E+ +
Sbjct: 2 KVLVV----GGTGPTGPHIVRGLLGRGHDVTIFHRG------AHEPP-----ELADV--E 44
Query: 136 TVWGDP---AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
+ GDP + +G FDVVL G+ + + P A + QF+ I IY+
Sbjct: 45 HIHGDPHFRESIDEALGLREFDVVLAMYGR-MRHLSP----ALAGRCGQFVGIGGVPIYQ 99
Query: 193 ---PAD-----------EPPHVE----GDVVKPDAGHVQVEKYISENFSNWASFRPQYMI 234
P D E P V+ V+ V E+ + FR +
Sbjct: 100 GFFPGDGRHRLPIPVTEEHPVVQERSDDPAVRFSRRLVDAEEAAFAHHPGATLFRFPMLY 159
Query: 235 GSGNNKDCEEWFFDRIVRK-RP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
G NN EW R VR RP + +P G Q R+ ++ + AV+ P+AA+ I
Sbjct: 160 GP-NNARPAEWSIVRRVRDGRPYIILPDGGSQIHTRCAARNAAAFVLAAVDRPQAAAGQI 218
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
+N +L +L + G +E+V
Sbjct: 219 YNAGDPTDWSLRQWVELIVRLMGADLEVV 247
>gi|441154723|ref|ZP_20966598.1| putative reductase [Streptomyces rimosus subsp. rimosus ATCC 10970]
gi|440618139|gb|ELQ81219.1| putative reductase [Streptomyces rimosus subsp. rimosus ATCC 10970]
Length = 328
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 109/274 (39%), Gaps = 43/274 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G + + L G +VT+ F+R G V GD +
Sbjct: 3 GGTEFVGRAVTEAALARGWQVTV---------------FHRGRHAPVPGTAVVHGDRTDA 47
Query: 145 GNV--VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE- 201
+ + T+DVV+D AVR A + +++++S+ +Y+ P H E
Sbjct: 48 ATLTALADGTWDVVVDTWAGAPTAVRDAAR-LLADRAGRYVYVSTGSVYRHPAGPGHTEA 106
Query: 202 GDVV--KPDAGHVQ-VEKYISENFSNWASF--------RPQYMIGSGNNKDCEEWFFDRI 250
G +V PDA V E + A+F R ++G N W+ RI
Sbjct: 107 GPLVDGSPDAEAVAYAEDKRGGELAALAAFGEDRTVLARAGMILGPWENIGRLPWWLTRI 166
Query: 251 VRKRPVPIPGS---GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA-VTLDGM 306
R PV PG G+Q+ + VRDL++ + A E S +NL+S+ T+ +
Sbjct: 167 ARGGPVLAPGPRDLGLQYID---VRDLAAWVLHAAET---GLSGPYNLISEPGHATMGEL 220
Query: 307 AKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFP 337
+ C G E+ P+ AAG+ P
Sbjct: 221 LEACVAVTGSDAELRWSGPEEILAAGLAPWTELP 254
>gi|406950676|gb|EKD80889.1| NAD-dependent epimerase/dehydratase [uncultured bacterium]
Length = 329
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 93/233 (39%), Gaps = 34/233 (14%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G ++ + L GHEVTI G N KM F + E++
Sbjct: 2 KILIL----GGTKFLGRHIVEAALARGHEVTIFHRGLTNP-KM----FIQVEELL----- 47
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK--- 192
GD N++ G +D +D +G VR D K + V+ + F+S+ +Y
Sbjct: 48 ---GDRTGDLNLLRGRKWDAAIDTSGYFPQVVRSSVDVLKDA-VQHYTFVSTISVYDDQH 103
Query: 193 ---PADEPPHV---EGDVVKPDAG------HVQVEKYISENFSNWASF-RPQYMIGSGNN 239
ADE + D +K A V E + + A RP ++G +
Sbjct: 104 LKSQADETAQLLPPADDTIKTMAPAQYGPLKVACEDVVHAAMAKRALIARPGLLVGPHDP 163
Query: 240 KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
D W+ RI R PG+ + RD++ + E + + N+
Sbjct: 164 TDRFTWWIRRIARGGKTLAPGNPSRQIQFIDARDVADWIITMTEVAQTGTYNV 216
>gi|291438346|ref|ZP_06577736.1| NAD-dependent epimerase/dehydratase [Streptomyces ghanaensis ATCC
14672]
gi|291341241|gb|EFE68197.1| NAD-dependent epimerase/dehydratase [Streptomyces ghanaensis ATCC
14672]
Length = 335
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 112/271 (41%), Gaps = 44/271 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM--TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP 141
+GG IG ++A+ELL GH V ++ G ++ F R + DP
Sbjct: 2 TGGAGFIGSHVARELLALGHRVVVLDDLSGGTGANVPDGAEF-RHGSVC---------DP 51
Query: 142 AEVGNVVGGVTFDVVLD----------------NNGKNLDAVRPVADWAKSSG-VKQFLF 184
V V D V N N+ + + A ++G VK F+F
Sbjct: 52 EVVDAVFASHRIDYVFHLAAYAAEGLSHFIKRFNYMNNVVGSVNLINAAVNAGTVKCFVF 111
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGH------VQVEKYISENFSN--WASFRPQYMIGS 236
SS +Y A++ P E V P+ + V+ E +S + FRP + G
Sbjct: 112 TSSIAVYG-ANQLPMSEELVPAPEDPYGIAKFSVEQELRVSHEMFGLPYVIFRPHNVYGE 170
Query: 237 GNN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
N ++ F ++ +R + G G Q +++RD++ + +VE P AA +
Sbjct: 171 YQNIGDRYRNVIGIFMNQALRGEEFTVFGDGEQTRAFSYIRDVAPAIARSVELP-AAYNE 229
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
IFN+ D+ +++ +A +A G+ + + H
Sbjct: 230 IFNIGGDQVYSVNRIAAAVCEAMGVELRVNH 260
>gi|395651883|ref|ZP_10439733.1| NAD-dependent epimerase/dehydratase [Pseudomonas extremaustralis
14-3 substr. 14-3b]
Length = 310
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F +R + ++P+ + G G Q + +V+DL S+L AVE E + I N+ +R+ +L+
Sbjct: 194 FTERALARKPITVFGDGEQTRDFVYVQDLVSILVQAVETREPTTEAI-NVGLNRSTSLND 252
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 347
+ A G P+ + + P+ I +A R + +A P
Sbjct: 253 LIAELGSATGTPLNVTYQAPRQGDIRHSRADNTRLLEHFALP 294
>gi|423360520|ref|ZP_17338023.1| hypothetical protein IC1_02500 [Bacillus cereus VD022]
gi|401081516|gb|EJP89790.1| hypothetical protein IC1_02500 [Bacillus cereus VD022]
Length = 307
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 111/273 (40%), Gaps = 25/273 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG ++ KELL G+EV I DK K F EI T+ + +V
Sbjct: 7 GGSGFIGKHVTKELLARGYEVVIF-------DKFKPSIDVPFKEIDILDIATLRENLIDV 59
Query: 145 GNVVGGVTFDVVLDN---NGK-----NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE 196
V+ V +DN N + N + + + +G+++ LF SS+ +Y
Sbjct: 60 DGVIHLAAL-VGVDNCRLNEEDVVRVNFEGTKNIVQVCNENGIEKLLFSSSSEVYGDGVS 118
Query: 197 PPHVEGDVVKPDAGH----VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
P E D+ P + + + E Y+ E SN R ++ + + + ++
Sbjct: 119 VPFKENDIKIPKSAYGKAKLMSEDYLKEYASNSLKIRVVRYFNVYGSQQNDNFVISKFLK 178
Query: 253 K----RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
+ + I G G Q +++ D+ + LA E E + FN+ +++ ++++ +A
Sbjct: 179 QAHSGENITIYGDGQQIRCFSYISDIVNGTILAFE-YEGENFADFNIGNNKPISMEELAI 237
Query: 309 LCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
+ G +I D G+ FR +
Sbjct: 238 KINELMGNKSKIKFLDLGEEGVRNSSIEIFRRI 270
>gi|424855428|ref|ZP_18279729.1| hypothetical protein OPAG_06581 [Rhodococcus opacus PD630]
gi|356663180|gb|EHI43306.1| hypothetical protein OPAG_06581 [Rhodococcus opacus PD630]
Length = 326
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 112/291 (38%), Gaps = 54/291 (18%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVL++ GG +G + LL +GHEVT+ G D + +
Sbjct: 2 KVLVM----GGTRFVGVLAVQRLLDAGHEVTVFHRGSRQPDW-------------TGNVR 44
Query: 136 TVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
+V GD A++ + G FD VLD + D + A V +++ S+ + +
Sbjct: 45 SVLGDRNNSADLARLAEG-RFDTVLDLSAYTGDQTESLL--AALPDVGRWVHCSTVNVVR 101
Query: 193 PA---------DEPPHVEGDVVKPDAGHVQVEKYISENF-------SNWASFRPQYMIGS 236
P+ D PH P G+ ++K E ++ R ++G
Sbjct: 102 PSPVLPWPEEIDYGPH-------PLWGNYAIDKIACERAIQNSRAGAHSVIVRLPLVLGP 154
Query: 237 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
N EE+ +RI+ + +PG G + + L AV+ P +++N+
Sbjct: 155 LNFIPREEFVLNRILDGAQILLPGDGQAVHQYIYRDHAAEALARAVDLP-GEGFDVYNVA 213
Query: 297 SDRAVT-LDGMAKLCAQAAGLPVEIVHYDPKAAGID------AKKAFPFRN 340
S R T L+G +CA+ G P + G D A FPF N
Sbjct: 214 SKRCNTSLEGFVDVCAEVLGRPADTRTVGGGPTGEDRATFNNADCVFPFSN 264
>gi|229139664|ref|ZP_04268234.1| NAD-dependent epimerase/dehydratase [Bacillus cereus BDRD-ST26]
gi|228643795|gb|EEL00057.1| NAD-dependent epimerase/dehydratase [Bacillus cereus BDRD-ST26]
Length = 359
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 114/280 (40%), Gaps = 61/280 (21%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G ++K P +
Sbjct: 21 KILIL----GGTRFLGRAFVEEALNRGHEVTLFNRG---TNKELFPEVEQL--------- 64
Query: 136 TVWGDPAEVGNVVGGVT------FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
+G+ GGV+ +DVV+D G + +R + D K + +K ++FISS
Sbjct: 65 --------IGDRNGGVSSLENRKWDVVVDTCGFSPHHIRNIGDVLKDN-IKHYIFISSLS 115
Query: 190 IYKPADEPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF------------------- 228
+YK D PH E +++P+ Q++ + S + +
Sbjct: 116 VYK--DWIPHDIKEDYILQPEPTKEQIKAVENSEISPYEHYGALKVLCEKEAEEYWPRRV 173
Query: 229 ---RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
R + G + D ++ R+ + V +PG + I ++D+++ EN
Sbjct: 174 LHVRAGLLSGMFDYTDRLPYWIQRVAKGGKVLVPGRKDRPVQIVDIKDVANWGLNMAENN 233
Query: 286 EAASSNIFNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYD 324
+A IFN+ + + +T++ + C + E V D
Sbjct: 234 KAG---IFNVTAPNDELTMEELLNTCKKVTNSDAEFVWVD 270
>gi|222480302|ref|YP_002566539.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC
49239]
gi|222453204|gb|ACM57469.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC
49239]
Length = 298
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 106/264 (40%), Gaps = 46/264 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK---MKKPPFNRFNEIVSA 132
KVL+ +GG IG YL + L GHEVT ++ ++ + ++ I SA
Sbjct: 2 KVLV----AGGTGFIGSYLCRALADGGHEVTALSRSPSDTPEGVASATGDVTDYDSIASA 57
Query: 133 GGKTVWGDPAEVGNVV---------GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL 183
V G A V V G V D + +NL VR A+ G ++FL
Sbjct: 58 ----VEGQDAVVNLVALSPLFEPKGGNVMHDRIHRKGTENL--VRA----AEEGGAERFL 107
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGN----- 238
+S+ G AD +GD A Q E+ + E+ W FRP + G G
Sbjct: 108 QLSALG----ADP----DGDTAYIRA-KGQAEEIVRESGLGWTIFRPSVVFGEGGEFVSF 158
Query: 239 NKDCEEWFFDRIVRKRPV-PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
K + F + P+ P+PG G HV DL SML A+E E + +
Sbjct: 159 TKRLKGMFAPGL----PLYPLPGGGKTRFQPIHVEDLVSMLVAALEEDEHVGET-YEIGG 213
Query: 298 DRAVTLDGMAKLCAQAAGLPVEIV 321
+TL + L +A V I+
Sbjct: 214 PETLTLRQVTDLVYEAEKKGVTII 237
>gi|189426414|ref|YP_001953591.1| NAD-dependent epimerase/dehydratase [Geobacter lovleyi SZ]
gi|189422673|gb|ACD97071.1| NAD-dependent epimerase/dehydratase [Geobacter lovleyi SZ]
Length = 335
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 14/139 (10%)
Query: 240 KDCEEWFFDRIVRK----RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
KD + F +R +PV + G G Q + +V D+ + L + +AA+ IFNL
Sbjct: 190 KDARQTFLGIWIRNILTGQPVLVFGDGRQVRDFNYVDDVVEAMLLCAAS-DAANGEIFNL 248
Query: 296 VSDRAVTLDGMAKLCAQAAGL-PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 354
+D L A+L QAAG +V + P ID +YA+ K L
Sbjct: 249 GADDPANLQDTAQLLVQAAGQGSFALVPFPPDRKAIDIGD--------YYADYGKIKATL 300
Query: 355 GWRSTTNLPEDLKERFEEY 373
GW+ L E L+ Y
Sbjct: 301 GWQPAVALQEGLQRTLAYY 319
>gi|423469318|ref|ZP_17446062.1| hypothetical protein IEM_00624 [Bacillus cereus BAG6O-2]
gi|402439536|gb|EJV71538.1| hypothetical protein IEM_00624 [Bacillus cereus BAG6O-2]
Length = 341
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 122/294 (41%), Gaps = 51/294 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS--DKMKKPPFNRFNEIVSAG 133
K+LI+ GG +G +E L GHEVT+ G N ++++ +R N++ S
Sbjct: 2 KILIL----GGTRFLGRAFVEEALNRGHEVTLFNRGTNNEIFPEVEQLIGDRNNDVSSLK 57
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
+ +DVV+D G + +R V + K + ++ ++FISS +YK
Sbjct: 58 NR----------------KWDVVIDTCGFSPHHIRNVGEVLKDN-IEHYIFISSISVYKD 100
Query: 194 ADEPPHVEGD-VVKPDAGHVQVEKYISENFSNWASF----------------------RP 230
P H++ D +++P+ Q++ + S++ + R
Sbjct: 101 WI-PHHIKEDYILQPEPTSDQIKAVENGEISHYEHYGALKVLCEKEAEKYWPGRVLHVRA 159
Query: 231 QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
+ G + D ++ R+ + V +PG + + ++D++S EN +A +
Sbjct: 160 GLLSGVFDYTDRLPYWIQRVAKGGKVLVPGRKDRPVQLVDIKDVASFGLNMAENNKAGTF 219
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFY 344
NI + +T++ + C + E V D + ++ K P+ M +
Sbjct: 220 NITG--PNDELTMEELLNTCKEVTNSDAEFVWVD--ESFMNENKVQPWTEMPLW 269
>gi|217960468|ref|YP_002339030.1| hypothetical protein BCAH187_A3080 [Bacillus cereus AH187]
gi|375284979|ref|YP_005105418.1| hypothetical protein BCN_2885 [Bacillus cereus NC7401]
gi|423352763|ref|ZP_17330390.1| hypothetical protein IAU_00839 [Bacillus cereus IS075]
gi|423568042|ref|ZP_17544289.1| hypothetical protein II7_01265 [Bacillus cereus MSX-A12]
gi|217065944|gb|ACJ80194.1| conserved domain protein [Bacillus cereus AH187]
gi|358353506|dbj|BAL18678.1| conserved domain protein [Bacillus cereus NC7401]
gi|401091105|gb|EJP99249.1| hypothetical protein IAU_00839 [Bacillus cereus IS075]
gi|401211381|gb|EJR18129.1| hypothetical protein II7_01265 [Bacillus cereus MSX-A12]
Length = 340
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 114/280 (40%), Gaps = 61/280 (21%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G ++K P +
Sbjct: 2 KILIL----GGTRFLGRAFVEEALNRGHEVTLFNRG---TNKELFPEVEQL--------- 45
Query: 136 TVWGDPAEVGNVVGGVT------FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
+G+ GGV+ +DVV+D G + +R + D K + +K ++FISS
Sbjct: 46 --------IGDRNGGVSSLENRKWDVVVDTCGFSPHHIRNIGDVLKDN-IKHYIFISSLS 96
Query: 190 IYKPADEPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF------------------- 228
+YK D PH E +++P+ Q++ + S + +
Sbjct: 97 VYK--DWIPHDIKEDYILQPEPTKEQIKAVENSEISPYEHYGALKVLCEKEAEEYWPRRV 154
Query: 229 ---RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
R + G + D ++ R+ + V +PG + I ++D+++ EN
Sbjct: 155 LHVRAGLLSGMFDYTDRLPYWIQRVAKGGKVLVPGRKDRPVQIVDIKDVANWGLNMAENN 214
Query: 286 EAASSNIFNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYD 324
+A IFN+ + + +T++ + C + E V D
Sbjct: 215 KAG---IFNVTAPNDELTMEELLNTCKKVTNSDAEFVWVD 251
>gi|190892423|ref|YP_001978965.1| mRNA-binding protein [Rhizobium etli CIAT 652]
gi|190697702|gb|ACE91787.1| putative mRNA-binding protein [Rhizobium etli CIAT 652]
Length = 326
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 107/267 (40%), Gaps = 41/267 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF-NRFNEIVSAGGKTVWGDPAE 143
GG I + + + +GH V++ G +K P + IV G + + A+
Sbjct: 9 GGTGQISYPCVERAVAAGHHVSVFNRG------LKSTPLPAGVSSIVGELGSGAYAELAD 62
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAV-RPVADWAKSSGVKQFLFISSAGIYKPADEPPH--- 199
G +DVV D + R + ++ G Q++FISSA +Y ++PP
Sbjct: 63 AG-------YDVVCQFIAFTPDQIARDIEVFSGKCG--QYVFISSASVY---EKPPRHYV 110
Query: 200 --VEGDVVKPDAGHVQVEKYISENFSN-----WASFRPQYMIGSG--NNKDCEEWFFDRI 250
E + P + Q + E W RP + + +G E R+
Sbjct: 111 ITEETPAINPYWPYSQAKIACEELLKKSGNLAWTIVRPSHTVRTGLPMMMGDSEIMARRL 170
Query: 251 VRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC 310
+ P+ + G G + D + + + +AA + IF++ SDRA T D + K
Sbjct: 171 LDGEPIIVAGDGHTPWTLTRSADFAVPF-VGLFGKQAAVNEIFHITSDRAHTWDDIQKTI 229
Query: 311 AQAAGLPVEIVH--------YDPKAAG 329
A+ G+ +IVH Y+P+ G
Sbjct: 230 ARLLGVEAKIVHVPTDTLIKYNPEWVG 256
>gi|374852099|dbj|BAL55040.1| hypothetical conserved protein [uncultured Acidobacteria bacterium]
Length = 310
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 105/245 (42%), Gaps = 33/245 (13%)
Query: 142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE--PPH 199
A + VG T+DVV+DN G + R D + ++FLF S+A +Y ++ P+
Sbjct: 28 ASLREAVGSRTWDVVIDNIGFTAEESRLAVD-VFAGRTERFLFTSTAAVYACLEDIVNPY 86
Query: 200 VEGDVVK-PDA-------------GHVQVEKYISENFSNW----ASFRPQYMIGSGNNKD 241
E D + P+ G ++ E+ + + + R +IG ++
Sbjct: 87 REEDTDRLPERARARQDPQLAYGFGKLEAERVLQQAYQERGFPITILRLPIVIGPRDHTL 146
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
++ RI + P+ +P G + D+ +E E + +++N+ + V
Sbjct: 147 RAYSYWVRIKDRAPLILPDGGRVDWRFIYSGDVVRAFIRLLEE-ERSIGHVYNIAQEEIV 205
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRA-------AKDIL 354
++ KL A+ G+ VEIV D + A++ P Y+ PR+ A+ L
Sbjct: 206 SVREFVKLSAEILGIEVEIV--DIPLQWLRAQRIDPV--FSPYSIPRSWILDISKAQREL 261
Query: 355 GWRST 359
GWRST
Sbjct: 262 GWRST 266
>gi|423207519|ref|ZP_17194075.1| hypothetical protein HMPREF1168_03710 [Aeromonas veronii AMC34]
gi|404620586|gb|EKB17483.1| hypothetical protein HMPREF1168_03710 [Aeromonas veronii AMC34]
Length = 332
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 108/281 (38%), Gaps = 42/281 (14%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +L L GHEVT+ N + P + ++ K
Sbjct: 2 KLLII----GGTGFLGRHLTALALDWGHEVTLF-----NRGLHQHPDWRDLVQLTGDRDK 52
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
++ A G GG+ +D+ +D + ++ A + +FIS+ +Y+
Sbjct: 53 SL---SALQG---GGLQWDLAIDTCCYRPEQAASLSA-ALLGCCARLIFISTISVYRDFS 105
Query: 196 EPPHVEGDVVKP--------DAGHVQV---EKYISENFSNWASFRPQYMIGSGNNKDCEE 244
P E + P D G ++V E+Y + RP + G +
Sbjct: 106 IPGMDESAPLHPIPEGETPTDYGPLKVLCEEEYRARWGERLCILRPGVLCGPHDPTGRMA 165
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
W+ R+ + P +PG G VRD + + A E + FNL+ D
Sbjct: 166 WWIKRVQQGGPWLLPGCGEDRLQYLDVRDCAEFVLRAAEQQLGGT---FNLLKPGITLCD 222
Query: 305 GMAKLCA--------QAAGLPVEIVHYDPKAAGIDAKKAFP 337
+ +L A Q LP + AAGI+ +++P
Sbjct: 223 WLERLSARLPPARPIQPEWLPWPTL----MAAGIEPWQSYP 259
>gi|254455290|ref|ZP_05068719.1| UDP-glucose 4-epimerase [Candidatus Pelagibacter sp. HTCC7211]
gi|207082292|gb|EDZ59718.1| UDP-glucose 4-epimerase [Candidatus Pelagibacter sp. HTCC7211]
Length = 329
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 145/354 (40%), Gaps = 73/354 (20%)
Query: 72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI---MTVGDE---NSDKMKKPPFNR 125
E KK+ I +GG +G LA L+ G+E+TI M G++ ++ K+KK
Sbjct: 2 TEIKKIFI----TGGAGYVGAMLAPFLISKGYELTIYDLMIYGEDVIADNSKIKK----- 52
Query: 126 FNEIVSAGGKTVWGDPAEVGNVVGGVT-FDVVLD--------------NNGK--NLDAVR 168
V GD ++ NV + D V+ N GK NLDA
Sbjct: 53 -----------VTGDIRDIENVKKSMKGHDAVIHLACISNDPSFELNPNLGKSINLDAFE 101
Query: 169 PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP--DAGHVQVE------KYISE 220
P+ A+ VK+F++ SS+ +Y +E E ++P D + E +Y +E
Sbjct: 102 PMVKIARELNVKRFIYASSSSVYGIKNEINVHEDMALEPLTDYSKFKAECESILSRYNTE 161
Query: 221 NFSNWASFRPQYMIGSGNNKDCE---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 277
+F+ + RP + G + + + KR + + G G Q H++D+
Sbjct: 162 DFTT-VTIRPATVCGYSTRQRLDVVVNILTNLAYHKRKITVFG-GEQLRPNLHIKDMIES 219
Query: 278 LTLAVENPEAASSN-IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF 336
L + + SN IFN+ + +D +A + + G V ++ P
Sbjct: 220 YYLVLNAKKNLISNQIFNVGFENQKVID-LANVTKKIIGEDV-VLETTPTND-------- 269
Query: 337 PFRNMHFYAEPRAAKDILGWRSTTNLPE---DLKERFEEYVKIGRDKKAMQFEI 387
N ++ + +IL +++ + + DLK+ F+E + + + M F I
Sbjct: 270 ---NRSYHISSKKITEILNFKTQFTVQDAVIDLKKAFDEKLLVNSLENEMYFNI 320
>gi|330830547|ref|YP_004393499.1| Isoflavone reductase [Aeromonas veronii B565]
gi|423208778|ref|ZP_17195332.1| hypothetical protein HMPREF1169_00850 [Aeromonas veronii AER397]
gi|328805683|gb|AEB50882.1| Isoflavone reductase [Aeromonas veronii B565]
gi|404618623|gb|EKB15543.1| hypothetical protein HMPREF1169_00850 [Aeromonas veronii AER397]
Length = 332
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 114/278 (41%), Gaps = 36/278 (12%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +L L GHEVT+ N + P + ++ K
Sbjct: 2 KLLII----GGTGFLGRHLTALALDWGHEVTLF-----NRGLHQHPDWRDLVQLTGDRDK 52
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP-- 193
++ A G G+ +D+V+D + ++ A + +FIS+ +Y+
Sbjct: 53 SL---SALQG---AGLQWDLVIDTCCYRPEQAASLSA-ALLGCCARLIFISTISVYRDFS 105
Query: 194 -----ADEPPHV--EGDVVKPDAGHVQV---EKYISENFSNWASFRPQYMIGSGNNKDCE 243
P H EG++ D G ++V ++Y + RP + G +
Sbjct: 106 MPGMNESAPLHAIPEGEM-PTDYGPLKVLCEQEYRARWGERLCILRPGVLCGPHDPTGRM 164
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
W+ R+ + P +PGSG VRD + + A E + FNL+ +
Sbjct: 165 AWWIKRVQQGGPWLLPGSGEDRLQYLDVRDCAEFVLRAAEQQLGGT---FNLIKPGIILC 221
Query: 304 DGMAKLCAQ---AAGLPVEIVHYDP-KAAGIDAKKAFP 337
D + +L A+ A + E + + AAGI+ +++P
Sbjct: 222 DWLERLSARLQPARSIQPEWLPWSTLMAAGIEPWQSYP 259
>gi|315649268|ref|ZP_07902357.1| NAD-dependent epimerase/dehydratase [Paenibacillus vortex V453]
gi|315275256|gb|EFU38625.1| NAD-dependent epimerase/dehydratase [Paenibacillus vortex V453]
Length = 323
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 122/322 (37%), Gaps = 55/322 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G + + L G+ ++T + D + +F S G + V+ A+
Sbjct: 16 AGHRGLVGSAIVRALEQQGYH-NLVTRTSQELDLREHDRVEQF--FCSEGIEYVFLAAAK 72
Query: 144 VGNVVGGVTF--DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEP--- 197
VG +V + D + DN L V D + GVK+ LF+ S IY K A +P
Sbjct: 73 VGGIVANRDYPADFIRDN----LQIQNNVIDLSYRYGVKKLLFLGSTCIYPKLAPQPMKE 128
Query: 198 ---------PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFF 247
P E + AG + Y + + + S P + G +N D E
Sbjct: 129 EYFMTGTLEPTNEAYAIAKIAGITMCQSYNRQYGTRFISAMPTNLYGPNDNYDLETSHVL 188
Query: 248 DRIVRK---------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
++RK + V I GSG H DL+ + E ++I N+
Sbjct: 189 PALLRKIHEAKENGRQEVEIWGSGQPKREFLHADDLADACVFLMNQYEG--NDIVNIGCG 246
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI----- 353
+ V++ +A+ A G + V+ K G PR D+
Sbjct: 247 KDVSIRELAESIASIIGYEGQFVYNTSKPDGT----------------PRKLVDVSRLTE 290
Query: 354 LGWRSTTNLPEDLKERFEEYVK 375
LGWR++ L L ++ +++
Sbjct: 291 LGWRASITLEHGLARTYDHFLE 312
>gi|428203719|ref|YP_007082308.1| nucleoside-diphosphate-sugar epimerase [Pleurocapsa sp. PCC 7327]
gi|427981151|gb|AFY78751.1| nucleoside-diphosphate-sugar epimerase [Pleurocapsa sp. PCC 7327]
Length = 315
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 129/321 (40%), Gaps = 51/321 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFN----------EIVS-- 131
+G IG +LA+ LL G V +G + + +P F R N E++
Sbjct: 7 TGVAGFIGSHLAEALLKQGERV----IGIDEFNDYYEPSFKRRNISSLESYSSFELIEGS 62
Query: 132 ----------AGGKTVWGDPAEVG-NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS-GV 179
A +T++ A+ G G +F + +N++A + + + AK S +
Sbjct: 63 IHELNWQELLANAETLYHQAAQAGVRASWGESFRHYTE---RNINATQIILEAAKESKSL 119
Query: 180 KQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYISENFSNW----ASFRPQ 231
K+ +F SS+ IY A+ P E +P + + + E + N+ + R
Sbjct: 120 KRLVFASSSSIYGNAETLPTPESICPQPTSPYGITKLAAEYLCFLYYRNFQVPVTALRYF 179
Query: 232 YMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
+ G D FF + P+PI G G Q + V D+ + A P+A
Sbjct: 180 SVYGPRQRPDMAFHKFFKAAMVGAPIPIYGDGQQTRDFTFVSDVVAANLAAATVPDAI-G 238
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAA 350
FN+ V L M A +P++ +Y A G DA+ H A+ A
Sbjct: 239 EAFNIGGGSRVVLADMLDKIEAIAAIPIQ-RNYLETARG-DAR--------HTGADVSKA 288
Query: 351 KDILGWRSTTNLPEDLKERFE 371
K +LGW +L E L +++E
Sbjct: 289 KALLGWSPKVSLIEGLTQQWE 309
>gi|334703778|ref|ZP_08519644.1| isoflavone reductase [Aeromonas caviae Ae398]
Length = 331
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 109/275 (39%), Gaps = 32/275 (11%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +L L GHEVT+ N + P + ++ G +
Sbjct: 2 KLLII----GGTGFLGRHLTTLALDWGHEVTLF-----NRGHRQHPDWRELTQL--HGDR 50
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD A + G +D+V+D + ++D A + +FIS+ +Y+
Sbjct: 51 D--GDLAPLRGE--GRHWDLVIDTCCYRPEQAEGLSD-ALLGRCDRLIFISTISVYRDFS 105
Query: 196 EP------PHVEGDVVKPDAGHVQV---EKYISENFSNWASFRPQYMIGSGNNKDCEEWF 246
+P P E D G ++V Y + + RP + G + W+
Sbjct: 106 QPGMDESAPLHEMAGAPTDYGPLKVLCESVYRARWGDRLCTLRPGVLCGPFDPTARLAWW 165
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
R+ R P +PG G VRD + + A E A FNL+ D +
Sbjct: 166 VRRVQRGGPWLLPGLGEDRLQYLDVRDCAEFVLRAAEQRLAGC---FNLIKPGIALNDWV 222
Query: 307 AKLCAQ---AAGLPVEIVHY-DPKAAGIDAKKAFP 337
+L A+ L +E + D AAG+ +++P
Sbjct: 223 ERLAARLTPVTPLQLEWAPWRDLMAAGVAPWQSYP 257
>gi|183983025|ref|YP_001851316.1| hypothetical protein MMAR_3024 [Mycobacterium marinum M]
gi|183176351|gb|ACC41461.1| conserved membrane protein [Mycobacterium marinum M]
Length = 886
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 84/224 (37%), Gaps = 32/224 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENS----------DKMKKPPFNRFNEIVSAG 133
+G V+G LA LL GHEV M+ +S D R
Sbjct: 6 TGAGGVLGRGLASRLLSQGHEVVGMSRRRPDSWPSQADFVAGDIRDAAAVRRAITGADVV 65
Query: 134 GKTVWG-DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
W +P G + + N+D R V D + G + +F SS +Y+
Sbjct: 66 AHCAWARNPGPDGRI-----------SQQINIDGTRNVLDAMAACGTGRIVFPSSPHVYR 114
Query: 193 PADEPPHVEGDVVKPDAGHVQ----VEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
P P E V P + + VE+ + E+ + W + R ++G ++ + W
Sbjct: 115 PGVPMPATEHGAVAPASAEGRHKAGVEQMLQESGAQWVAVRSALIVG----RNIDNWV-- 168
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
R + P GS + H+ D+ +LT AV + A + +
Sbjct: 169 RRLFALPAFPDGSADDVLQVVHLDDVLRLLTRAVSDVGAGTGPV 212
>gi|291534641|emb|CBL07753.1| Nucleoside-diphosphate-sugar epimerases [Roseburia intestinalis
M50/1]
gi|291540659|emb|CBL13770.1| Nucleoside-diphosphate-sugar epimerases [Roseburia intestinalis
XB6B4]
Length = 304
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 116/278 (41%), Gaps = 47/278 (16%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK++I N IG A E +E+T + + D + + + + N
Sbjct: 2 KKMIITGVN----GFIG-RCAMEYFSKDYEITGIDLADRYCEDGAEIHYYQCN------- 49
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGK-NLDA--VRPVAD--------WAKSSGVKQF- 182
+ D E+ N+ GV DV+L G N+ A V P+AD + +K F
Sbjct: 50 --MSKDSQELANIFTGVQPDVILHCAGSANVGASIVNPMADLDGNLHSLYQLLLALKSFE 107
Query: 183 -----LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI--- 234
+F+SSAG+Y + P E D + P + + V K + E ++ + Y I
Sbjct: 108 KRPKIIFLSSAGVYGNPKQLPITEKDALAPISPY-GVHKQMGEELCSYYNRVHGYHIRCV 166
Query: 235 ------GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL--SSMLTLAVENPE 286
GSG K + + + + + G+G + + H+ D+ + L L + PE
Sbjct: 167 RIFSAYGSGLRKQLLWDIYQKYLNTGRIDLFGTGNETRDFIHISDILRALELILGYQGPE 226
Query: 287 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
IFN+ + V++ +A++ A G +IV ++
Sbjct: 227 ----EIFNVANGEEVSIRELAEIYAAQLGEKTDIVRFN 260
>gi|340355317|ref|ZP_08678005.1| GDP-L-fucose synthase [Sporosarcina newyorkensis 2681]
gi|339622514|gb|EGQ27033.1| GDP-L-fucose synthase [Sporosarcina newyorkensis 2681]
Length = 314
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 102/265 (38%), Gaps = 51/265 (19%)
Query: 142 AEVGNVVGGVTF--DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-----KPA 194
A+VG ++ + D + DN L V D A+ GVK+ LF+ S IY +P
Sbjct: 65 AKVGGILANTMYPGDFLYDN----LMIQSNVIDAARRYGVKKLLFLGSTCIYPKFAPQPL 120
Query: 195 DEPPHVEGDV--------VKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE--- 243
E + GD+ + AG Y ++ +N+ S P + G +N D E
Sbjct: 121 KESYLLTGDLEPTNEPYALAKIAGIKLCTAYNNQYGTNFMSVMPTNLYGPNDNFDLETSH 180
Query: 244 ------EWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF-NL 295
+ V+ P + I G+G + HV DL++ +E A F N+
Sbjct: 181 VLPSLMRKIHEAKVQDEPTITILGTGSPLRDFLHVDDLAAACVYLMERYAAEEIGEFVNI 240
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-- 353
+ +T+ +A+ + G ++V K G PR D+
Sbjct: 241 GTGNEITIKALAEKLCEVIGYEGQLVFDSTKPDGT----------------PRKLTDVSK 284
Query: 354 ---LGWRSTTNLPEDLKERFEEYVK 375
LGW + E L++ + Y++
Sbjct: 285 LTSLGWSYGISFEEGLQDTYAWYIQ 309
>gi|302876696|ref|YP_003845329.1| NmrA family protein [Clostridium cellulovorans 743B]
gi|307687371|ref|ZP_07629817.1| NmrA family protein [Clostridium cellulovorans 743B]
gi|302579553|gb|ADL53565.1| NmrA family protein [Clostridium cellulovorans 743B]
Length = 286
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 19/158 (12%)
Query: 165 DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN 224
+ V P D AK GV Q +FIS GI K P A H ++EKY+ E
Sbjct: 83 EHVFPFIDKAKQMGVLQIIFISILGIDK-------------NPLAQHRRIEKYLKEIEVP 129
Query: 225 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
+ RP Y + N + I + + IP +G N VRD+++ +
Sbjct: 130 YTIIRPSYFMQKLNT-----MYRHEIKVQGKIMIP-AGKAKINFIDVRDVAAFTARVICE 183
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
+ I+ + A+T A++ + AG VE V+
Sbjct: 184 ENEHFNMIYKVTGKEAITYHEAAEIFSNTAGKNVEYVN 221
>gi|126433566|ref|YP_001069257.1| NAD-dependent epimerase/dehydratase [Mycobacterium sp. JLS]
gi|126233366|gb|ABN96766.1| NAD-dependent epimerase/dehydratase [Mycobacterium sp. JLS]
Length = 324
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 105/256 (41%), Gaps = 34/256 (13%)
Query: 126 FNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
F++ G + WGD +FD L +N L + R + +S+ +++F++
Sbjct: 80 FHQAGQPGVRRSWGD-----------SFDAYLRDN--ILASQRLLEAARRSTSLRRFVYA 126
Query: 186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF-----SNWA----SFRPQYMIGS 236
SS+ +Y A+ P +E D +P + + V K +E+ N+ S R + G
Sbjct: 127 SSSSVYGDAERYPTLETDTPQPRSPY-GVTKLAAEHLMGLYAQNFGVPTLSLRYFTVFGP 185
Query: 237 GNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
D F R + RP+ I GSG Q + V D+ S A ++N+
Sbjct: 186 RQRPDMAFTRFIARTLAGRPIEIFGSGEQIRDFTFVDDVVSANLAAATAAGVLPGTVYNI 245
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILG 355
+VT++ + + P+ + H AG D FR AA+ +G
Sbjct: 246 SGGASVTVNEILATLEEILDGPI-LTHRAETVAG-DV-----FRTG---GSNEAARRGIG 295
Query: 356 WRSTTNLPEDLKERFE 371
W T +L E L+ + E
Sbjct: 296 WEPTVSLHEGLRRQVE 311
>gi|189501064|ref|YP_001960534.1| NAD-dependent epimerase/dehydratase [Chlorobium phaeobacteroides
BS1]
gi|189496505|gb|ACE05053.1| NAD-dependent epimerase/dehydratase [Chlorobium phaeobacteroides
BS1]
Length = 304
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 125/314 (39%), Gaps = 48/314 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG+ IG +L +LL GH+V I D+ + +KP G + + D
Sbjct: 7 GGNGFIGSHLVDKLLAEGHKVRIF---DKYEEHYRKPITGCDYRYGDFGNRGLLADALND 63
Query: 145 GNVVGGV-------------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG-I 190
++V + FDV N+ + + + +++ +FISS G +
Sbjct: 64 IDIVFHLISTTLPETSNDDPVFDV-----QSNVVETLFLLEQCVAKKIRKVVFISSGGTV 118
Query: 191 YKPADEPPHVEGDVVKPDAGH----VQVEKYISENFS-----NWASFRPQYMIGSGNNKD 241
Y E P E + P+ + + +EKY++ F N+ RP G N +
Sbjct: 119 YGIPTEIPVHENNPTNPECSYGITKLVIEKYLAL-FKHLYGLNYVIVRPSNPYGERQNPN 177
Query: 242 CEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
+ F +++ + + I G G + + DL + A A S IFNL S
Sbjct: 178 SIQGAIPVFLNKVAKGESIDIWGDGEVVRDYIFIDDLVDGIYKAA--TVKAQSCIFNLGS 235
Query: 298 DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWR 357
+L+ + K+ Q G VEI + AK+ F ++ RA K+ L W
Sbjct: 236 STGYSLNYIVKIIRQITGRQVEIKY--------KAKRTFDIPEIYLDIS-RAGKE-LSWA 285
Query: 358 STTNLPEDLKERFE 371
T+L +++ +E
Sbjct: 286 PVTSLESGIEKTWE 299
>gi|443490926|ref|YP_007369073.1| conserved membrane protein [Mycobacterium liflandii 128FXT]
gi|442583423|gb|AGC62566.1| conserved membrane protein [Mycobacterium liflandii 128FXT]
Length = 886
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 84/224 (37%), Gaps = 32/224 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENS----------DKMKKPPFNRFNEIVSAG 133
+G V+G LA LL GHEV M+ +S D R
Sbjct: 6 TGAGGVLGRGLASRLLSQGHEVVGMSRRRPDSWPSQADFVAGDIRDAAAVRRAITGADVV 65
Query: 134 GKTVWG-DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
W +P G + + N+D R V D + G + +F SS +Y+
Sbjct: 66 AHCAWARNPGPDGRI-----------SQQINIDGTRNVLDAMAACGTGRIVFPSSPHVYR 114
Query: 193 PADEPPHVEGDVVKPDAGHVQ----VEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
P P E V P + + VE+ + E+ + W + R ++G ++ + W
Sbjct: 115 PGLPMPATEHGAVAPASAEGRHKAGVEQMLQESGAQWVAVRSALIVG----RNIDNWV-- 168
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
R + P GS + H+ D+ +LT AV + A + +
Sbjct: 169 RRLFALPAFPDGSADDVLQVVHLDDVLRLLTRAVSDVGAGTGPV 212
>gi|150025365|ref|YP_001296191.1| UDP-N-acetylglucosamine C4 epimerase [Flavobacterium psychrophilum
JIP02/86]
gi|149771906|emb|CAL43380.1| UDP-N-acetylglucosamine C4 epimerase [Flavobacterium psychrophilum
JIP02/86]
Length = 326
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 138/338 (40%), Gaps = 59/338 (17%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
K K+LI +GG IG L++ L GHEV + + + +N + + +
Sbjct: 5 KFKILI----TGGAGFIGSNLSEYFLDKGHEVVCL------DNFVTGHRYNIEHLLANKN 54
Query: 134 GKTVWGDPAEVGNVVGG-VTFDVVLDN----------------NGKNLDAVRPVADWAKS 176
+ GD + + + D VL N N+ + AK
Sbjct: 55 YSLIEGDIRNLSDCQKALIGVDYVLHQAALGSVPRSISDPITTNEVNVSGFLNMLSAAKE 114
Query: 177 SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS 236
+ VK+F++ +S+ Y ++ P VE + KP + + + KYI+E +++ F Y I +
Sbjct: 115 AKVKRFIYAASSSTYGDSESLPKVENVIGKPLSPYA-ITKYINELYADI--FSKTYAIET 171
Query: 237 ---------GNNKDCEEW-------FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
G +D + F + + I G G + ++ ++ M L
Sbjct: 172 IGLRYFNVFGRKQDPKGAYAAVIPKFVQQFINYENPVINGDGNYSRDFTYIDNVIQMNEL 231
Query: 281 AV--ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 338
A+ +NPEA ++ ++N + TL+ + K L E+ +DPK A ++ P
Sbjct: 232 AMFTQNPEAVNT-VYNTAFGDSTTLNDLVK------KLQFELSQFDPKIANVNIIYG-PN 283
Query: 339 RNM---HFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 373
R H A AK +LG+ ++ E LK+ + Y
Sbjct: 284 RAGDIPHSLASIDKAKKLLGYNPKFSMQEGLKQSVKWY 321
>gi|118617784|ref|YP_906116.1| hypothetical protein MUL_2265 [Mycobacterium ulcerans Agy99]
gi|118569894|gb|ABL04645.1| conserved membrane protein [Mycobacterium ulcerans Agy99]
Length = 886
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 84/224 (37%), Gaps = 32/224 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENS----------DKMKKPPFNRFNEIVSAG 133
+G V+G LA LL GHEV M+ +S D R
Sbjct: 6 TGAGGVLGRGLASRLLSQGHEVVGMSRRRPDSWPSQADFVAGDIRDAAAVRRAITGADVV 65
Query: 134 GKTVWG-DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
W +P G + + N+D R V D + G + +F SS +Y+
Sbjct: 66 AHCAWARNPGPDGRI-----------SQQINIDGTRNVLDAMAACGTGRIVFPSSPHVYR 114
Query: 193 PADEPPHVEGDVVKPDAGHVQ----VEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
P P E V P + + VE+ + E+ + W + R ++G ++ + W
Sbjct: 115 PGLPMPATEHGAVAPASAEGRHKAGVEQMLQESGAQWVAVRSALIVG----RNIDNWV-- 168
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
R + P GS + H+ D+ +LT AV + A + +
Sbjct: 169 RRLFALPAFPDGSADDVLQVVHLDDVLRLLTRAVSDVGAGTGPV 212
>gi|448305842|ref|ZP_21495770.1| nucleoside-diphosphate-sugar epimerase [Natronorubrum
sulfidifaciens JCM 14089]
gi|445587842|gb|ELY42092.1| nucleoside-diphosphate-sugar epimerase [Natronorubrum
sulfidifaciens JCM 14089]
Length = 324
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 120/325 (36%), Gaps = 51/325 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G +LA L+ +GH+VT+ D + + +R I+ + V GD +
Sbjct: 6 TGGAGFVGSHLADRLVDAGHDVTVF-------DNVSRGGRDRLEGILDEI-RFVEGDVRD 57
Query: 144 VGNVVGGVT-----FDVVLDNNGK------------NLDAVRPVADWAKSSGVKQFLFIS 186
V F + N K NL+ V+ A + + +F S
Sbjct: 58 HDAFADAVDDPDVLFHLAAINGTKHFYDRPRAVLDVNLEGVKHATQIAAGQDIDRLVFAS 117
Query: 187 SAGIY-------KPADEPPHVEGDVVKPDAGHVQV----EKYISENFSN----WASFRPQ 231
S+ +Y P P + D P + E+Y+ + + + RP
Sbjct: 118 SSEVYGFPETFPTPETHPLQLM-DPTNPRYSYAGTKILGEQYVIQTAAAHEFAYTIVRPH 176
Query: 232 YMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
G D F +R+V I G G Q + ++ D + A +AA
Sbjct: 177 NFYGEAMGYDHVIPEFIERLVTGSEFTIYGDGTQTRSFCYIDDGIDAIERA-GFADAARD 235
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAA 350
IFN+ + +T+ +A G E+ H + K + P + A
Sbjct: 236 EIFNVGTQDEITITELASALFDVTGRRPEVTHIESKELSGSPDRRQP--------DLSKA 287
Query: 351 KDILGWRSTTNLPEDLKERFEEYVK 375
+D+LG+ TT+L L+ FE Y +
Sbjct: 288 RDLLGYEPTTSLETGLRRTFEYYYR 312
>gi|384539258|ref|YP_005723342.1| nucleotide sugar epimerase / oxidoreductase [Sinorhizobium meliloti
SM11]
gi|336037911|gb|AEH83841.1| nucleotide sugar epimerase / oxidoreductase [Sinorhizobium meliloti
SM11]
Length = 324
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 11/123 (8%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
+ +RI RP I G G Q + HVRD++ LA ++ + +FN+ S +L
Sbjct: 196 WMERIAAGRPPIILGDGTQTLDFVHVRDIARANLLAAKS--GVTDEVFNVASGTETSLKD 253
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
+A+L A+ G +E Y+P A+K A+ R A+ +LG+++ +L E
Sbjct: 254 LAQLLARIMGSSIE-PQYEP------ARKVNAV--TRRLADMRKAERLLGFKTEISLEEG 304
Query: 366 LKE 368
L+E
Sbjct: 305 LRE 307
>gi|261417133|ref|YP_003250816.1| NAD-dependent epimerase/dehydratase [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|261373589|gb|ACX76334.1| NAD-dependent epimerase/dehydratase [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 288
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 21/239 (8%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA 142
+GG V+G L +EL+ G V ++T+ GD + + R+ ++ ++ G
Sbjct: 6 TGGAGVVGKALCRELIARGVCVRVLTLPGDSLAKSLPSEVDVRYGDVTDF--DSIRGAFE 63
Query: 143 EVGNVVGGVTFDVVLDNNGK----NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
V +VV + ++ G N D R V + +K +GV++FL++SS + P P
Sbjct: 64 NV-DVVYHLAAILLSTKRGAFEHVNTDGTRNVLEASKLAGVRRFLYVSSISVTYPILTP- 121
Query: 199 HVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP- 257
G+ K + E + + +W RP +IG G E F V++ PV
Sbjct: 122 --YGESKK------KGESLVHASGLDWTIVRPTLVIGDGGG--VEFNMFRDYVKRFPVYF 171
Query: 258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL 316
+PG G DL + +A P A + L +T+ MAK AG+
Sbjct: 172 MPGGGKCLKRPVRSVDLVKGIAVAGLMP-CAVGKTYALAGSTVMTMAEMAKHVLTDAGM 229
>gi|408490891|ref|YP_006867260.1| GDP-L-fucose synthetase [Psychroflexus torquis ATCC 700755]
gi|408468166|gb|AFU68510.1| GDP-L-fucose synthetase [Psychroflexus torquis ATCC 700755]
Length = 245
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 40/231 (17%)
Query: 170 VADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPDAGHVQVEK 216
+ D A S+ K+F+F+ S+ IY K A +P P E + AG + E
Sbjct: 20 LIDTAHSTEAKKFIFLGSSCIYPKLAPQPLKKEYLLTGSLEPTTEWYAIAKIAGVMACEA 79
Query: 217 YISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPIPGSGMQFT 266
+ ++ S P + G +N D + ++RK PV + GSG
Sbjct: 80 IRKQYGRDFVSLMPTNLYGPNDNFDLKTSHVLPAMIRKFHEAKLNNNEPVELWGSGTPIR 139
Query: 267 NIAHVRDLSSMLTLAVEN--PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
HV D++ + A+EN PE +++N+ + + +T+ +A+ + G EIV
Sbjct: 140 EFLHVDDMADAVVFALENKLPE----HLYNIGTGKDLTIKELAETIQKVVGHNGEIVWDS 195
Query: 325 PKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
K G P + M+ +A GW+++TNL + ++ + +++
Sbjct: 196 SKPDGT------PRKLMNVDKMKKA-----GWQASTNLEDGIESSYNWFLE 235
>gi|229145638|ref|ZP_04274021.1| NAD-dependent epimerase/dehydratase [Bacillus cereus BDRD-ST24]
gi|228637884|gb|EEK94331.1| NAD-dependent epimerase/dehydratase [Bacillus cereus BDRD-ST24]
Length = 364
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 110/274 (40%), Gaps = 49/274 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G L +E L GHEVTI G K F +++
Sbjct: 21 KILIL----GGTRFLGRALVEEALKRGHEVTIFNRG------TNKEIFPEVEQLI----- 65
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + +DVV+D G + +R + D K + +K ++FISS +YK D
Sbjct: 66 ---GDRNNDVSSLENRKWDVVVDTCGFSPHHIRNIGDVLKDN-IKHYIFISSLSVYK--D 119
Query: 196 EPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF----------------------RPQ 231
PH E +++P+ Q++ + S + + R
Sbjct: 120 WIPHDIKEDYILQPEPTEEQIKGVENGEISPYEHYGALKVLCEKEAEKYWPGRVLHVRAG 179
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G + D ++ RI + V +PG + I ++D++ EN +A
Sbjct: 180 LLSGMFDYTDRLPYWIGRIAKGGEVLVPGRKDRPVQIVDIKDVAYFGLNMAENNKAG--- 236
Query: 292 IFNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYD 324
IFN+ + +T++ + C + E V D
Sbjct: 237 IFNVTGPNDELTMEELLNTCKKVTNSDAEFVWVD 270
>gi|218884406|ref|YP_002428788.1| UDP-glucose 4-epimerase (galE-2) [Desulfurococcus kamchatkensis
1221n]
gi|218766022|gb|ACL11421.1| UDP-glucose 4-epimerase (galE-2) [Desulfurococcus kamchatkensis
1221n]
Length = 307
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 90/228 (39%), Gaps = 40/228 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG +L +L+ G++ ++ G PF I G + +
Sbjct: 6 TGGGGFIGRFLVSDLVKKGYDAIVVDRGPS--------PFVEHQRIKYYVGDVT--NVIQ 55
Query: 144 VGNVVGGVTFDVV---------------LDNNGKNLDAVRPVADWAKSSGVKQFLFISSA 188
+ N++ DVV L N++A + + + + + G+K+F+F+SSA
Sbjct: 56 INNIMAKHKPDVVIHLAALLADTCEIEPLQATKVNIEATQNLIELSITHGIKRFVFMSSA 115
Query: 189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA---------SFRPQYMIGSGNN 239
+Y P P E D KP + V KY E +W + RP + G G
Sbjct: 116 SVYHPDTPEPVREEDAGKP-VSYYGVTKYAGELIGSWYYRKGLIDFRALRPTVVFGPGRF 174
Query: 240 K----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
+ + +R + V + + N +VRD+ S+L L E
Sbjct: 175 RGPSAEYSSMIIERALNNEKVIVKNPNDK-VNYIYVRDVVSVLILLAE 221
>gi|448728450|ref|ZP_21710778.1| NAD-dependent epimerase/dehydratase [Halococcus saccharolyticus DSM
5350]
gi|445796932|gb|EMA47417.1| NAD-dependent epimerase/dehydratase [Halococcus saccharolyticus DSM
5350]
Length = 338
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 104/261 (39%), Gaps = 43/261 (16%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSD--------KMKKPPFNRFNEIVSAGGKT 136
GG +I + ++L+ +GH+VT+ G ++D + ++RF E
Sbjct: 7 GGTGLISTGITRQLVDAGHDVTVYNRGRTDADLPPGVAHVTGDRTDYDRFEE-------- 58
Query: 137 VWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPAD 195
++ ++ D+V A+R A ++Q++F S+ +Y +P
Sbjct: 59 ------QMADLDVDCVIDMVAFEPADIESAIR-----AFEGEIEQYVFCSTIDVYHRPVV 107
Query: 196 EPPHVEGDVVKPDAGHVQVEKYISEN--FSNWAS-------FRPQYMIGSG----NNKDC 242
+ P VE P +K EN F + RP + G G +
Sbjct: 108 DMPIVESAARSPAVSEYGADKAACENRLFEAHSDREFPATVLRPWHTYGEGGTLIHTLGD 167
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
+ DR+ +P+ + G G H D++S A++NP AA +++ +R +T
Sbjct: 168 GTAYIDRLREGKPLVVHGDGTSIWGPCHRDDIASAFVGALDNP-AAIGETYHVTCERPMT 226
Query: 303 LDGMAKLCAQAAGLPV-EIVH 322
+ + A A P ++VH
Sbjct: 227 WNQYHRRAADALDAPDPDLVH 247
>gi|384100776|ref|ZP_10001833.1| UDP-glucose 4-epimerase [Rhodococcus imtechensis RKJ300]
gi|383841682|gb|EID80959.1| UDP-glucose 4-epimerase [Rhodococcus imtechensis RKJ300]
Length = 330
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 116/289 (40%), Gaps = 55/289 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G + LL GHEV I + D ++ P G + V GD AE
Sbjct: 6 TGGAGYVGSVCSTVLLERGHEVVI--IDDLSTGNADAVPL---------GAEFVEGDVAE 54
Query: 144 VGNVVGGVT----FDVVLDNNGKNL--DAVR-PVADW-------------AKSSGVKQFL 183
V + + G + FD VL ++L ++V+ P W + SG ++ +
Sbjct: 55 VVSDLLGTSGTPRFDGVLHFAAQSLVGESVQYPEKYWRGNVVTTLELLEAMRHSGTRKLV 114
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIG 235
F S+A Y + P E D +P + + I ++++ S R + G
Sbjct: 115 FSSTAATYGEPEHSPITEADPTRPTNPYGATKLAIDHAITSYSVAHSLAATSLRYFNVAG 174
Query: 236 S----GNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTL 280
+ G N+ E +++ + + I G+ G + HV DL+ L
Sbjct: 175 AYKSAGENRVVETHLIPLVLQVALGQREKISIFGTDWPTPDGTAIRDYIHVLDLAEAHVL 234
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
A+E+ I+NL S ++ + CA+ GLP+ V P+ AG
Sbjct: 235 ALESSIEGRHRIYNLGSGAGFSVREVISACARVTGLPIA-VEDAPRRAG 282
>gi|385799250|ref|YP_005835654.1| NAD-dependent epimerase/dehydratase [Halanaerobium praevalens DSM
2228]
gi|309388614|gb|ADO76494.1| NAD-dependent epimerase/dehydratase [Halanaerobium praevalens DSM
2228]
Length = 317
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 33/231 (14%)
Query: 126 FNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
F++ AG ++ WG+ F++ NN + + + + A+ S +K+F++
Sbjct: 78 FHQAAQAGVRSSWGED-----------FEIYTHNN---IMGTQRLLEAARGSNIKKFVYA 123
Query: 186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN-----FSNW----ASFRPQYMIGS 236
SS+ +Y D+ P E + ++P + + V K EN + N+ S R + G
Sbjct: 124 SSSSVYGDTDKLPMKETNRLQPVSPY-GVSKLAGENLCYLYYKNFNVPTVSLRYFTVFGE 182
Query: 237 GNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
D F I++ + + I G G Q N HV D+ LA E+ + FN+
Sbjct: 183 RQRPDMAFHIFIKAILQDKKLTIFGDGKQSRNFTHVDDIVKANILAAESDVEGEN--FNI 240
Query: 296 VSD--RAVTLDG---MAKLCAQAAGLPVE-IVHYDPKAAGIDAKKAFPFRN 340
D R V D M K+ + A + +V D K D KA N
Sbjct: 241 GGDGKRVVLNDAISLMEKIIGKKANREYQKVVKGDVKHTSADTSKAKKLLN 291
>gi|448310886|ref|ZP_21500665.1| NAD-dependent epimerase/dehydratase [Natronolimnobius
innermongolicus JCM 12255]
gi|445607234|gb|ELY61127.1| NAD-dependent epimerase/dehydratase [Natronolimnobius
innermongolicus JCM 12255]
Length = 316
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 87/221 (39%), Gaps = 25/221 (11%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKY- 217
NL+A + + A+ + + SSA IY + P EG +P + + + +++Y
Sbjct: 104 NLEATLSLLECARREDAR-VVLASSAAIYGQPEYTPIDEGHPTEPSSPYGLEKLTIDRYA 162
Query: 218 -ISENFSNWASFRPQYM------IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 270
+ + +Y G+ F ++ P+ + G G Q + H
Sbjct: 163 RLYHELYGLETVALRYFNVYGPRQAGGDYSGVISIFLEQARNGEPITVNGDGTQTRDFVH 222
Query: 271 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 330
+ D+ LA + ++ FN+ + VT+ +A+ G EIVH DP+ I
Sbjct: 223 ISDVVQANLLAAQTESVGAA--FNVGTGETVTIRELAETIRSVVGSDSEIVHRDPRPGDI 280
Query: 331 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 371
+ + AE A + LG+ T L + L+ E
Sbjct: 281 EQSQ----------AELSAIRSALGYEPTVTLADGLQTLVE 311
>gi|15789654|ref|NP_279478.1| hypothetical protein VNG0405C [Halobacterium sp. NRC-1]
gi|169235368|ref|YP_001688568.1| dtdpglucose 4,6-dehydratase-like protein [Halobacterium salinarum
R1]
gi|10580018|gb|AAG18958.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
gi|167726434|emb|CAP13219.1| NAD-dependent epimerase/dehydratase [Halobacterium salinarum R1]
Length = 329
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 132/339 (38%), Gaps = 48/339 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG +L ELL ++VT G ++ PF + + V GD E
Sbjct: 8 GGTRFIGRHLVAELLAHDYDVTTFNRGTHDN------PFADDDRVAR-----VEGDRTER 56
Query: 145 GNVVGG---VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE 201
++ V D V D V D V ++++SS Y A+E P E
Sbjct: 57 RALLDAKRTVDPDAVFDCVAYKPRDVESATDIFGD--VDAYVYVSSGAAYA-AEEVPKRE 113
Query: 202 GDV-------------------VKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC 242
G+ + AG V + + A RP + G + +
Sbjct: 114 GETRLESCSAEEATDDSSATYGARKAAGDRIVFEAAARGVPAMA-VRPPVVYGPHDYTER 172
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
++ +R+ + + +PG G +V D++ L L E+ E + +N+ AVT
Sbjct: 173 LAYWVERVAERDEIVVPGDGTNLWQRVYVEDVARGLRLVAEDGEPGEA--YNVGDRNAVT 230
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPKAAGID--AKKAFP-FRNM-HFYAEPRAAKDILGWRS 358
LDGM L A A VE + P+ I FP +R+ H + A+ LG+ S
Sbjct: 231 LDGMLDLIADALDTSVERSYTSPRELSIVDLGPGEFPLYRDAPHVLDTTKIAE--LGYES 288
Query: 359 TTNLPEDLKERFEEYVKIGR--DKKAMQFEIDDKILESL 395
T E ++ + + + GR D E +D++L+ L
Sbjct: 289 TPP-AEAMQRTVDAHREHGRTGDDNGPDRETEDRLLDVL 326
>gi|293606526|ref|ZP_06688884.1| GDP-L-fucose synthase [Achromobacter piechaudii ATCC 43553]
gi|292815149|gb|EFF74272.1| GDP-L-fucose synthase [Achromobacter piechaudii ATCC 43553]
Length = 320
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 123/321 (38%), Gaps = 53/321 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G + +EL G+ ++T D + +RF V+ A+
Sbjct: 11 AGHRGMVGAAITRELQRRGYP-DVLTRTRAELDLENQNQVHRFFSTTPV--DVVYLAAAK 67
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD 203
VG ++ V D KNL V A ++GV++ LF+ S+ IY P + P + D
Sbjct: 68 VGGILANQNHPV--DFLYKNLMIQCNVIRAAYAAGVRKLLFLGSSCIY-PREAPQPIRED 124
Query: 204 V--------------VKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEE-WFFD 248
+ AG E Y E + + P + G +N D
Sbjct: 125 ALLTGPLEATNEPYAIAKIAGLKLCEAYQREYGARFICAMPTNLYGPHDNYDLHSSHVLP 184
Query: 249 RIVRK---------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
++RK V I G+G +V DL+ + +E+P+A I+N+ + +
Sbjct: 185 ALIRKFHEGREAGQESVTIWGTGTPLREFLYVDDLAKACVMLMEHPDA--EGIYNIGAGK 242
Query: 300 AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD-----IL 354
+++ +A L A+ G IV+ K G PR D L
Sbjct: 243 DISIADLAALVARVVGYQGRIVYDTAKPDGT----------------PRKLMDSSRVTAL 286
Query: 355 GWRSTTNLPEDLKERFEEYVK 375
GW+ +L + + ++ +++
Sbjct: 287 GWQPAVSLTDGIALAYQHFLR 307
>gi|389741537|gb|EIM82725.1| glycosyltransferase family 2 protein [Stereum hirsutum FP-91666
SS1]
Length = 1026
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 144/356 (40%), Gaps = 79/356 (22%)
Query: 64 AFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF 123
A +++A K++ +V +GGH IG ++A++L G V I+ + +S +P
Sbjct: 2 AIVSQSTADSAKQIYVV---TGGHGFIGSHVARDLYDQGQHVRIIDINPRSSFDTAEP-- 56
Query: 124 NRFNEIVSAGGKTVWGDPAEVGNVVGGVT----FDVVLDNNG------------KNLDAV 167
I + DPA V G T F V+ G +N
Sbjct: 57 -----ICTEAFIGNLCDPAFCTQAVRGATVVLHFAAVMGGMGAIHGDNDSIIFEENSTMT 111
Query: 168 RPVADWAKSSGVKQFLFISSAGIYKPAD--EPPHVEGDVVKPDA---------GHVQVEK 216
R + + ++GV +F + SSA +Y P D P V+ + + DA G +EK
Sbjct: 112 RNILLASIATGVGKFFYASSACVY-PEDLQADPLVDVSLKESDAWSQIPPRPQGLYGLEK 170
Query: 217 YISE---------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP-- 259
+SE F N R + +G K + + K +P P
Sbjct: 171 LLSEALIQQYTSQIEVRIARFHNIYGRRGAW--SNGREKVPAAFIRKALAAKLLLPSPPT 228
Query: 260 ----GSGMQFTNIAHVRD-LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA 314
G G Q + + D + ++L+L ++ S N+ S+ +V++ G+A+L Q A
Sbjct: 229 MEIWGDGTQRRSFLFIDDCVQAILSLL----DSTCSKPMNIGSEDSVSMTGLAELAIQIA 284
Query: 315 GLPVEIV---HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLK 367
GL V+ V H + G+ ++ + N F A+ I+GW T L + ++
Sbjct: 285 GLQVQDVDFHHILDRPIGVASRNS----NNAF------ARRIIGWEPQTRLLDGIR 330
>gi|414174812|ref|ZP_11429216.1| hypothetical protein HMPREF9695_02862 [Afipia broomeae ATCC 49717]
gi|410888641|gb|EKS36444.1| hypothetical protein HMPREF9695_02862 [Afipia broomeae ATCC 49717]
Length = 314
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 126/323 (39%), Gaps = 52/323 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G L + L + V I+T D + + NR+ + + V A+
Sbjct: 16 AGHRGMVGGALVRRL--ARENVEILTASRSELDLLDQAAVNRW--FAAMRPQVVLHAAAK 71
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEG 202
VG +V T +NL V A GV++ LF+ S+ IY K A +P +
Sbjct: 72 VGGIVANNTLRAEFIY--ENLLIATNVIHAAHVQGVEKLLFLGSSCIYPKLAPQPLREDS 129
Query: 203 ---DVVKPD---------AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRI 250
D ++P AG E Y S+ S++ S P + G G+N E
Sbjct: 130 LLTDTLEPTNEPYAIAKIAGVKMAEAYRSQYGSDFISIMPTNLYGPGDNYHPEYSHVVAA 189
Query: 251 VRKR----------PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
+ +R V + G+G +V D++ ++N + S + N+ S
Sbjct: 190 LIRRFHEAKETGAAEVVVWGTGTPRREFLYVDDMADASIHLMKN--YSESGLINVGSGED 247
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LG 355
+++ A + A+ G +IV K G PR D+ G
Sbjct: 248 ISIADFAHVVARTVGYTGKIVFDTSKPDGT----------------PRKLLDVSKLANFG 291
Query: 356 WRSTTNLPEDLKERFEEYVKIGR 378
WR+TT+L E +K + ++K R
Sbjct: 292 WRATTSLDEGMKRAYAAFLKEQR 314
>gi|20094161|ref|NP_614008.1| nucleoside-diphosphate-sugar epimerase [Methanopyrus kandleri AV19]
gi|19887177|gb|AAM01938.1| Nucleoside-diphosphate-sugar epimerase [Methanopyrus kandleri AV19]
Length = 309
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 83/211 (39%), Gaps = 27/211 (12%)
Query: 174 AKSSGVKQFLFISSAGI------YKPADE--PPH-VEGDVVKPDAGHVQVEKYISENFSN 224
A V++F++ SS G Y P DE P + V AG V Y +
Sbjct: 106 AAEHDVERFVYASSGGAVYGEPEYLPVDEEHPTRPISNYGVSKLAGEYYVRVYAERDGFE 165
Query: 225 WASFRPQYMIGSGNNKDCEE----WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
+ R + G + E F R R P+ I G G Q + V D++ +
Sbjct: 166 YVILRYANVYGPRQDPRGEAGVIPIFLLRAARGEPLTIFGDGEQTRDFVFVEDVARVTAE 225
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRN 340
AVE ++N+ + R +++ + G+ VE+V+ DP+ P
Sbjct: 226 AVER----GDGVYNIGTGRETSVNDIVNAVKAVTGVDVEVVYEDPR----------PGEV 271
Query: 341 MHFYAEPRAAKDILGWRSTTNLPEDLKERFE 371
Y +P A++ LG+ +L E ++ +E
Sbjct: 272 RRIYLDPSRAREELGFEPRVDLEEGIERTWE 302
>gi|423605268|ref|ZP_17581161.1| hypothetical protein IIK_01849 [Bacillus cereus VD102]
gi|401244416|gb|EJR50780.1| hypothetical protein IIK_01849 [Bacillus cereus VD102]
Length = 345
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 114/280 (40%), Gaps = 61/280 (21%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G ++K P +
Sbjct: 2 KILIL----GGTRFLGRAFVEEALNRGHEVTLFNRG---TNKELFPEVEQL--------- 45
Query: 136 TVWGDPAEVGNVVGGVT------FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
+G+ GGV+ +DVV+D G + +R + D K + +K ++FISS
Sbjct: 46 --------IGDRNGGVSSLENRKWDVVVDTCGFSPHHIRNIGDVLKDN-IKHYIFISSLS 96
Query: 190 IYKPADEPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF------------------- 228
+YK D PH E +++P+ Q++ + S + +
Sbjct: 97 VYK--DWIPHDIKEDYILQPEPTKEQIKAVENGEISPYEHYGALKVLCEKEAEEYWPRRV 154
Query: 229 ---RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
R + G + D ++ R+ + V +PG + I ++D+++ EN
Sbjct: 155 LHVRAGLLSGMFDYTDRLPYWIQRVAKGGKVLVPGRKDRPVQIVDIKDVANWGLNMAENN 214
Query: 286 EAASSNIFNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYD 324
+A IFN+ + + +T++ + C + E V D
Sbjct: 215 KAG---IFNVTAPNDELTMEELLNTCKKVTNSDAEFVWVD 251
>gi|228908803|ref|ZP_04072635.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis IBL
200]
gi|228850813|gb|EEM95635.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis IBL
200]
Length = 341
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 111/273 (40%), Gaps = 47/273 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G + KE L GHEVT+ G K F +++
Sbjct: 2 KILIL----GGTRFLGRAVVKEALNRGHEVTLFNRG------TNKEVFPEVEQLI----- 46
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD ++ + + +DVV+D G + +R V + K + ++ ++FISS +YK D
Sbjct: 47 ---GDRSDDVSSLENRKWDVVVDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSVYK--D 100
Query: 196 EPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF----------------------RPQ 231
PH E +++P+ Q++ + S + + R
Sbjct: 101 WIPHDIKEDYILQPEPMEEQIKAVENGEISPYEHYGALKVLCEKEADKYWPGRVLHVRAG 160
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G + D ++ R+ + V +PG + ++D++S EN +A + N
Sbjct: 161 LLSGMFDYTDRLTYWIQRVAKGGKVLVPGRKNRPVQFVDIKDVASFGLNMAENNKAGTFN 220
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
I + +T++ + C + E V D
Sbjct: 221 ITG--PNYELTMEELLNTCKKVTNSDAEFVWVD 251
>gi|357056438|ref|ZP_09117484.1| hypothetical protein HMPREF9467_04456 [Clostridium clostridioforme
2_1_49FAA]
gi|355380342|gb|EHG27480.1| hypothetical protein HMPREF9467_04456 [Clostridium clostridioforme
2_1_49FAA]
Length = 337
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 81/201 (40%), Gaps = 22/201 (10%)
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAV-RPVADWAKSSGVKQFLFISSAGIYK------ 192
D V +V G T+DVV + V R + + + +Q++FISSA Y+
Sbjct: 50 DEEAVARIVEGRTYDVVAQFIAYGAEDVERDIRLFQGRT--RQYIFISSASAYQKPMAGC 107
Query: 193 PADEP-----PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGN-----NKDC 242
P E P+ E K DA V Y F RP + + D
Sbjct: 108 PITESTPLINPYWEYSRKKIDAEEVLTAAYRRNGFPV-TIVRPSHTYDGKKPPVAIHGDK 166
Query: 243 EEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
W RI+ +P+ IPG G + H D + + NP A N +++ SD ++
Sbjct: 167 GNWQILKRILEGKPIIIPGDGTSLWTLTHSTDFARGYVGLMGNPHAI-GNAYHITSDESM 225
Query: 302 TLDGMAKLCAQAAGLPVEIVH 322
T + + + A+A P+ +H
Sbjct: 226 TWNQIYETLAEALDRPLNALH 246
>gi|300782135|ref|YP_003762426.1| UDP-glucose 4-epimerase [Amycolatopsis mediterranei U32]
gi|384145340|ref|YP_005528156.1| UDP-glucose 4-epimerase [Amycolatopsis mediterranei S699]
gi|399534017|ref|YP_006546679.1| UDP-glucose 4-epimerase [Amycolatopsis mediterranei S699]
gi|299791649|gb|ADJ42024.1| UDP-glucose 4-epimerase [Amycolatopsis mediterranei U32]
gi|340523494|gb|AEK38699.1| UDP-glucose 4-epimerase [Amycolatopsis mediterranei S699]
gi|398314787|gb|AFO73734.1| UDP-glucose 4-epimerase [Amycolatopsis mediterranei S699]
Length = 309
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 127/329 (38%), Gaps = 56/329 (17%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KKVL +GG I ++ LL G+ V I D M + R NE V+ G
Sbjct: 4 KKVLF----TGGGGFIAAHVIPLLLEGGYTVRIF-------DNMTRGDRARVNEFVATGQ 52
Query: 135 KTVWGDPAEVGNVVG----GVT----FDVVLDNNGK---------NLDAVRPVADWAKSS 177
+ G V G T F V N N+ V A
Sbjct: 53 VELVEKDVRYGGAVREAMRGCTHVIHFATVSINKSIADPHESIDINMIGNHNVFAAAADE 112
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKP--------DAGHVQVEKYISENFSNWASFR 229
GV++ +F S+A +Y P E D ++P AG + Y + +W + R
Sbjct: 113 GVERLVFASTASVYGDPKRLPMHEDDELRPLTPYCISKRAGEDLLGFYERQKGLSWNALR 172
Query: 230 PQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
+ G G + F R+ +P I G G Q + HV DL+ + A+E+
Sbjct: 173 FFNVYGPGQKIEAYYTSVINHFIQRLRAGQPPIIDGRGDQSMDFVHVTDLAKAVVAALES 232
Query: 285 PEAASSNI-FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 343
A N+ N+ + ++ +AK+ +A G+ VE + + + +++A
Sbjct: 233 ERA---NLPINIGTGIDTSIAALAKILIEAVGVDVEPLFNERDV--LVSRRA-------- 279
Query: 344 YAEPRAAKDILGWRSTTNLPEDLKERFEE 372
A+ A+D+LGW + + +++ E
Sbjct: 280 -ADISRARDVLGWEPRITVEDGMRDLVRE 307
>gi|229191135|ref|ZP_04318124.1| NAD-dependent epimerase/dehydratase [Bacillus cereus ATCC 10876]
gi|228592285|gb|EEK50115.1| NAD-dependent epimerase/dehydratase [Bacillus cereus ATCC 10876]
Length = 341
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 110/273 (40%), Gaps = 47/273 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVTI G N F E+ G
Sbjct: 2 KILIL----GGTRFLGRAFVEEALKRGHEVTIFNRGTNNE---------IFPEVEHLIGD 48
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + N T+DVV+D G + +R V + K + ++ ++FISS +YK D
Sbjct: 49 RN-GDVSSLKN----RTWDVVIDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSVYK--D 100
Query: 196 EPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF----------------------RPQ 231
PH E +++P+ Q++ + S + + R
Sbjct: 101 WIPHDIKEDYILQPEPTEEQIKAVENGEISPYEHYGALKVLCEKEAEKYWPGRVLHVRAG 160
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G + D ++ R+ + V +PG + I ++D++ EN +A + N
Sbjct: 161 LLSGMFDYTDRLPYWIQRVAKGGNVLVPGRKNRPVQIVDIKDVARFGLNMAENNKAGTFN 220
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
I + +T++ + C + E V D
Sbjct: 221 ITG--PNDELTMEELLNTCKKVTNSDAEFVWID 251
>gi|337281987|ref|YP_004621458.1| NAD-dependent epimerase/dehydratase [Streptococcus parasanguinis
ATCC 15912]
gi|335369580|gb|AEH55530.1| NAD-dependent epimerase/dehydratase [Streptococcus parasanguinis
ATCC 15912]
Length = 325
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 110/272 (40%), Gaps = 45/272 (16%)
Query: 111 GDENSDKMKKPPFNRFNEIVSAGG-KTVWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAV 167
GD +S + + F + +V AG T WG NVVG
Sbjct: 50 GDLSSIEEVRQAFQSVDAVVHAGALSTAWGPWKAFYQANVVG-----------------T 92
Query: 168 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHV-EGDVVKPDAGHVQ---VEKYISEN-F 222
+ V + + VK+ +++SS IY + ++ E D P H+ K SE F
Sbjct: 93 QNVLELCREYAVKRLVYVSSPSIYAAGKDQLNIKESDA--PKENHLNNYIRSKLASEKLF 150
Query: 223 SNWAS-----FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 277
S+++ RP+ + G G+ R+ RK +P+ G Q ++ V +++
Sbjct: 151 SDYSDVPSIILRPRGLFGVGDTSILPRVL--RLSRKIGIPLIRGGEQLMDMTCVENVALA 208
Query: 278 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP 337
+ LA+E E A ++N+ + T + + + G P+ Y AG+ A A+
Sbjct: 209 IRLALEAKE-AHGQVYNITNGEPKTFKYLIETTLKGLGEPIR---YRKLPAGLVAGVAYS 264
Query: 338 ----FRNMHFYAEP---RAAKDILGWRSTTNL 362
+R H AEP R +L + T ++
Sbjct: 265 LEGVYRFFHLKAEPPLTRYTYYLLRYSQTLDI 296
>gi|374297324|ref|YP_005047515.1| nucleoside-diphosphate-sugar epimerase [Clostridium clariflavum DSM
19732]
gi|359826818|gb|AEV69591.1| nucleoside-diphosphate-sugar epimerase [Clostridium clariflavum DSM
19732]
Length = 330
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 108/267 (40%), Gaps = 40/267 (14%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVL V GG VI +++ ++ GHE+ ++ G + E G K
Sbjct: 2 KVLFV----GGTGVISEGVSRRVIEKGHELYLLNRGSRS-------------EFTPKGAK 44
Query: 136 TVWGDPAEV---GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY- 191
+ GD ++ ++ FDVV++ + ++ + ++ Q++FISSA Y
Sbjct: 45 LITGDIRDIDACAKILENYYFDVVVNWITFTPEHLKADIELFRNK-TDQYIFISSASAYQ 103
Query: 192 KP-----ADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF-----RPQY-----MIGS 236
KP E +E + ++ EK + + N F RP + MI +
Sbjct: 104 KPPSHYIITESTPLENPYWQYSRDKIECEKIVLNEYRN-TGFPVTIVRPSFTYGLSMIPA 162
Query: 237 GNNKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
N W +R+ R + + + G G + H D + + N ++ F++
Sbjct: 163 ALNSWEHPWSLVERMKRGKKIIVHGDGTTLWTMTHNEDFAKGFVGLLGNKKSIGEA-FHI 221
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVH 322
SD +T D + + AAG+ I+H
Sbjct: 222 TSDEVITWDEIYRAIGHAAGVEPNIIH 248
>gi|340344551|ref|ZP_08667683.1| Sugar epimerase-like protein [Candidatus Nitrosoarchaeum koreensis
MY1]
gi|339519692|gb|EGP93415.1| Sugar epimerase-like protein [Candidatus Nitrosoarchaeum koreensis
MY1]
Length = 295
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 95/228 (41%), Gaps = 45/228 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG LAK+L SG ++TI+T K + PF K + D
Sbjct: 11 TGGTGFIGSRLAKKLHDSGADITILT-----RRKQENTPF-----------KIILDDLTN 54
Query: 144 VGNVVGGVTFDVV--------LDNNGK-----NLDAVRPVADWAKSSGVKQFLFISSAGI 190
N+ FDVV L+ N K N D V+ + ++ SG K +++IS +
Sbjct: 55 -PNLRFEQKFDVVCHLASVTPLEKNKKIIQSVNYDGVKNL--FSAISGAKLYVYISGLAV 111
Query: 191 YKPADE------PPHVEGDVVKPDAGHVQVEKYISENFSNWA-SFRPQYM--IGSGNNKD 241
+ P + P + + +K ++ ++++ EN +F Y+ + GN
Sbjct: 112 FDPKYDKIIETTPKKSDTEFIKT---RIKAQEFLEENCKKSGINFSVAYLGDVVYGNGGF 168
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
+ DR+ +K IPG+G N HV D+ L ++ E S
Sbjct: 169 FKSMILDRM-QKGTFRIPGNGKYIKNFIHVEDVVGALIAVIQKSETDS 215
>gi|355681734|ref|ZP_09062134.1| hypothetical protein HMPREF9469_05171 [Clostridium citroniae
WAL-17108]
gi|354811414|gb|EHE96046.1| hypothetical protein HMPREF9469_05171 [Clostridium citroniae
WAL-17108]
Length = 318
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 101/249 (40%), Gaps = 38/249 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVG-------DENSDKMKKPPFNRFNEIVSAGGKT 136
+GG IG YL L+ +G+EV +T G DE D + +R +
Sbjct: 6 TGGCGHIGTYLIPMLVRAGYEVINITRGISRPYVEDEAWDYVTPVIMDREKD-------- 57
Query: 137 VWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE 196
+ + G+ D+V+D +++ + + K + + +LF SS + A+
Sbjct: 58 -----KGFAHKIAGMEPDIVVDLINFHIEDTKATTEALKGTKLSHYLFCSSVWAHGRAEI 112
Query: 197 PPHVEGDVVKP---DAGH--VQVEKYISENFSNWASFRPQYMIGSGNNKD-----CEEW- 245
P D+ K D G Q E Y+ E + A F P +I G W
Sbjct: 113 LPADPADLQKAPLDDYGFNKFQSEIYLREQYHT-AGF-PATIIMPGQISGPGWTIMNPWA 170
Query: 246 -----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
F++I + + +P GM+ + H D++ M A+ + A F+ V ++
Sbjct: 171 NKTPVVFEKIAKGEEIFLPNFGMETLHHVHGEDVAQMFFKAITHRNQALGETFHAVGSQS 230
Query: 301 VTLDGMAKL 309
+TL G AKL
Sbjct: 231 ITLYGYAKL 239
>gi|374998177|ref|YP_004973676.1| NAD-dependent epimerase/dehydratase [Azospirillum lipoferum 4B]
gi|357425602|emb|CBS88496.1| NAD-dependent epimerase/dehydratase [Azospirillum lipoferum 4B]
Length = 313
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F RI R P+ I G G Q + V+DL LT A++ P + + +FN+ + R T++
Sbjct: 196 FAGRIARGEPITINGDGQQVRDFIFVKDLVRYLTAAMDTPRSGAP-VFNVCTGRPTTVNR 254
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAG 329
+A++ + +G P++ Y P G
Sbjct: 255 LAEVLGELSGRPLD-RRYGPARPG 277
>gi|56476479|ref|YP_158068.1| sugar dehydratase [Aromatoleum aromaticum EbN1]
gi|56312522|emb|CAI07167.1| Sugar dehydratase [Aromatoleum aromaticum EbN1]
Length = 315
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 21/161 (13%)
Query: 179 VKQFLFISSAGIY-----KPADE-PPHVEGDVVKPDAGHVQ---VEKYISENFSN----- 224
V+Q+L IS+ +Y +P DE P ++G +P+ G +K ++E +
Sbjct: 92 VRQYLLISTTTVYQQSAGRPVDENAPLLDGP--QPELGDYADYGYDKCLAERAARRECER 149
Query: 225 ----WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
RP + G N E +FFDR+ + PV IP N V D++ +L
Sbjct: 150 LGIALTVLRPAIIYGYYNYAPRETYFFDRLRNREPVVIPEPARSSFNFIWVVDMAHLLWR 209
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
+ +P FNL S AVT + + + G +E +
Sbjct: 210 CIGDPRVFGET-FNLASGEAVTHARIVEALGEIVGKTIETL 249
>gi|297623712|ref|YP_003705146.1| NAD-dependent epimerase/dehydratase [Truepera radiovictrix DSM
17093]
gi|297164892|gb|ADI14603.1| NAD-dependent epimerase/dehydratase [Truepera radiovictrix DSM
17093]
Length = 333
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 22/200 (11%)
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPV---ADWAK-SSGVKQFLFISSAGIYK--- 192
DPA V +GG+ F V + N A P AD A +Q++FISSA Y+
Sbjct: 52 DPASVEAALGGLGFRVF--DAVVNWIAFTPEHLEADLALFRDRTRQYVFISSASAYQTPP 109
Query: 193 ---PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD- 248
P E + + G + E+ +++ + + F P ++ + D FD
Sbjct: 110 QRLPITESTPLRNPYWRYAQGKIACEERLTQAYRD-EGF-PMTIVRPSHTYDRTLLPFDG 167
Query: 249 ------RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
R+ R V + G G + H RD + + NP+A F++ SD +T
Sbjct: 168 GYTVLDRMRRGAKVIVHGDGTSLWTLTHHRDFALGFVGLLGNPQALG-EAFHITSDEVLT 226
Query: 303 LDGMAKLCAQAAGLPVEIVH 322
+ + L A+AAG +VH
Sbjct: 227 WNQIVDLVARAAGTEARVVH 246
>gi|411008519|ref|ZP_11384848.1| isoflavone reductase [Aeromonas aquariorum AAK1]
Length = 326
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 111/278 (39%), Gaps = 36/278 (12%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +L L GHEVT+ N + + P + +++ +
Sbjct: 2 KLLII----GGTGFLGRHLTALALDWGHEVTLF-----NRGRRQHPDWRELSQLQGDRDR 52
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
D + G ++D+ +D + ++ A ++ +FIS+ +Y+
Sbjct: 53 ----DLTPLHRYQG--SWDLAIDTCCYRPEQAASLSA-ALLGRCERLIFISTISVYRDFA 105
Query: 196 EPPH---------VEGDVVKPDAGHVQV---EKYISENFSNWASFRPQYMIGSGNNKDCE 243
+P EG++ + D G ++V Y++ RP + G +
Sbjct: 106 QPGQDESAPLHEMAEGELPE-DYGPLKVLCEATYLARWGERLCVLRPGVLCGPHDPTGRL 164
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
W+ R+ + P +PG G VRD + + A E S IFNLV
Sbjct: 165 AWWVKRVQQGGPWLLPGQGEDRLQYLDVRDCAEFVLRAAEQ---QLSGIFNLVKPGIALS 221
Query: 304 DGMAKLCAQAAGLPVEIVHYDPK----AAGIDAKKAFP 337
D + +L A+ + + P AAG++ +++P
Sbjct: 222 DWVDRLAARLTPATPIVPEWAPWPALLAAGVEPWQSYP 259
>gi|322391247|ref|ZP_08064718.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Streptococcus
peroris ATCC 700780]
gi|321145851|gb|EFX41241.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Streptococcus
peroris ATCC 700780]
Length = 327
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 137/327 (41%), Gaps = 58/327 (17%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGD--ENS-------DKMKKP 121
KKVL+ +G +G Y+ +EL+ G++V VG ENS D K
Sbjct: 3 KKVLV----TGATGFLGKYVVEELVEHGYQVRAFGRNSKVGRSLENSSVSFFQGDLTKAE 58
Query: 122 PF----NRFNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ +V AG TVWG P E D N+ + V + +
Sbjct: 59 DLLEACQEMDMVVHAGALSTVWG-PWE--------------DFYQANVLGTKYVLEACRQ 103
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVE-KYISEN-FSNWAS-----F 228
+G+++ +++SS IY P D+ E D + + + + K SE F ++A
Sbjct: 104 TGIQRLVYVSSPSIYAAPRDQLGIKESDAPEENNLNNYIRSKLASEKLFKDYADVPSIIL 163
Query: 229 RPQYMIGSGNNKDCEEWFFDRIV---RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
RP+ + G G+ R++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 164 RPRGLFGIGDTS-----ILPRVINLSQKLGIPLIGDGRQLMDMTCVENVALAIRLAIEAL 218
Query: 286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK-AAGIDAKKAFPFRNMHFY 344
E A ++N+ + + + + G P++ AGI + F +++++
Sbjct: 219 E-AKGEVYNITNGEPRAFRDLLEESLKGLGYPIKYRKLPASLLAGIASSLEFLYKSLNLK 277
Query: 345 AEP---RAAKDILGWRSTTNLPEDLKE 368
EP R +L + T ++ + +E
Sbjct: 278 GEPPLTRYTYYLLRYSQTLDISKAERE 304
>gi|408484411|ref|ZP_11190630.1| NAD-dependent epimerase/dehydratase [Pseudomonas sp. R81]
Length = 310
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 114/288 (39%), Gaps = 24/288 (8%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIV--SAGGKTVW 138
+GG IG +L + LLG G+++ ++ + G + + P V SA +
Sbjct: 9 TGGAGFIGSHLVEALLGKGYKIRVLDNLSTGKVANLPVAHPDLELMIGDVADSAVVEQAM 68
Query: 139 GDPAEVGNVVGGVTFDVVLDN----NGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
D + V ++ + +D+ + N V +GV + +F SSA Y
Sbjct: 69 ADCSAVVHLAAVASVQASVDDPVATHQANFVGTLNVCQSMLKAGVTRVVFASSAATYGNN 128
Query: 195 DEPPHVEGDVVKPDAGHVQVEKYISENFSNW---------ASFRPQYMIG-----SGNNK 240
E + D K +K SE + ++ FR + G S
Sbjct: 129 GEGTAIAEDTPKSPLTPYASDKLASEYYLDFYRREHGLEPVIFRFFNIFGPRQDPSSPYS 188
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
F +R + +P+ + G G Q + +V+DL S+L AVE E A I N+ R+
Sbjct: 189 GVISIFTERALAGKPITVFGDGEQTRDFVYVQDLVSILVQAVETREPAPEAI-NVGLSRS 247
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPR 348
+L+ + A G + + + P+ I +A R + +A P+
Sbjct: 248 TSLNDLIAELGNATGTALNVTYQAPRQGDIRHSRANNTRLLERFALPQ 295
>gi|344995847|ref|YP_004798190.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor
lactoaceticus 6A]
gi|343964066|gb|AEM73213.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor
lactoaceticus 6A]
Length = 305
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 102/233 (43%), Gaps = 26/233 (11%)
Query: 154 DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH-- 211
D LD + L V + D+ VK+F+F SSA +Y + P E ++P++ +
Sbjct: 83 DAYLDCSINVLGTVN-LLDYCAKYKVKKFIFASSAAVYGEPEYIPIDENHPLRPESFYGL 141
Query: 212 --VQVEKYI---SENFS-NWASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGS 261
+ E+YI + NF+ + FR + G + E F +R+ + V I G
Sbjct: 142 SKLTSEEYIKMFAHNFNFEYIIFRCSNVYGPRQDPFGEGGVVSIFCERMQSSKNVIIFGD 201
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
G Q + +V D++ +A+ E + S FNL + + V+++ + ++ + G V
Sbjct: 202 GTQTRDFIYVEDVAEANCVAL---ETSVSGTFNLSTGKNVSVNELFEILSGLTGYKKSPV 258
Query: 322 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 374
Y PK G A H K +LG+ +L E LK+ E ++
Sbjct: 259 -YQPKRPGDIA---------HSCLSNNLLKSVLGFSPQFSLLEGLKKTVEYFI 301
>gi|228901562|ref|ZP_04065743.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis IBL
4222]
gi|434375994|ref|YP_006610638.1| isoflavone reductase [Bacillus thuringiensis HD-789]
gi|228858087|gb|EEN02566.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis IBL
4222]
gi|401874551|gb|AFQ26718.1| isoflavone reductase [Bacillus thuringiensis HD-789]
Length = 345
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 119/293 (40%), Gaps = 49/293 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G + +E L GHEVTI G N F E+ G
Sbjct: 2 KILIL----GGTRFLGRAVVEEALKRGHEVTIFNRGTNNE---------IFPEVEHLIGD 48
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + N +DV++D G + +R + D K++ +K ++FISS +YK D
Sbjct: 49 RN-GDVSSLEN----RKWDVIVDTCGFSPHHIRNIGDVLKNN-IKHYIFISSLSVYK--D 100
Query: 196 EPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF----------------------RPQ 231
PH E +++P+ Q++ + S + + R
Sbjct: 101 WIPHDIKEDYILQPEPTEEQIKAVENGEVSPYEHYGALKVLCEKEAEKYWPRCVLHVRAG 160
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G + D ++ R+ + V +PG + I ++D++S EN +A + N
Sbjct: 161 LLSGMFDYTDRLPYWIQRVAKGGKVLVPGRKDRPVQIVDIKDVASFGLNMAENNKAGTFN 220
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFY 344
I + +T++ + C + V D + ++ K P+ M +
Sbjct: 221 ITG--PNDELTMEELLNTCKKVTNSDAAFVWVD--ESFMNEHKVQPWTEMPLW 269
>gi|340757124|ref|ZP_08693727.1| UDP-N-acetylglucosamine 4-epimerase [Fusobacterium varium ATCC
27725]
gi|251834392|gb|EES62955.1| UDP-N-acetylglucosamine 4-epimerase [Fusobacterium varium ATCC
27725]
Length = 347
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 91/214 (42%), Gaps = 22/214 (10%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK----PDAG---HVQVE 215
N+ + + K G+K+F+ SS+ +Y + P E D+V P A +V
Sbjct: 129 NVRGTMNILEICKKLGIKKFIQASSSSVYGNNKKAPFRETDIVDFAISPYAATKKSCEVI 188
Query: 216 KYISENFSNWASFRPQYMIGSGNNK--DCEEWFFDR-IVRKRPVPIPGSGMQFTNIAHVR 272
++ N F+ ++ G + D + F + I+ + +P G G F + +V+
Sbjct: 189 GHVYHKLYNIDMFQLRFFTVYGERQRPDLAIYKFTKMILEGKEIPFYGDGNTFRDYTYVK 248
Query: 273 DLSSMLTLAVENPEAASS--NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 330
D+ +T +++ + S I NL V+L M ++ G+ V+I P G
Sbjct: 249 DIVQGITKSIDYLKNNSDVYEILNLGESHVVSLKEMVEVIENTLGIKVKINKL-PMQMG- 306
Query: 331 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPE 364
D +K YA+ AK ++G+ +T +
Sbjct: 307 DVEKT--------YADINKAKILIGYNPSTKFED 332
>gi|308511317|ref|XP_003117841.1| hypothetical protein CRE_00931 [Caenorhabditis remanei]
gi|308238487|gb|EFO82439.1| hypothetical protein CRE_00931 [Caenorhabditis remanei]
Length = 342
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 86/211 (40%), Gaps = 17/211 (8%)
Query: 178 GVKQFLFISSAGIYKPA--DEPPHVEGDVVKPDAGHVQVEKYISENF--SNWASFRPQYM 233
GVK+ + IS+ +Y + D P E + K E S W S++ Y+
Sbjct: 128 GVKKLVHISTDEVYGDSFEDTTPKSESASLPNPTNPYAASKAACEMVIRSYWHSYKLPYV 187
Query: 234 IGSGNNKDCEEWFFDRIVRK--------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
+ NN +++ K +P P+ G G+ + +V D S +T
Sbjct: 188 MVRMNNVYGPRQIHTKLIPKFTKLALDGQPYPLMGDGLHTRSWMYVEDCSEAITRVAL-- 245
Query: 286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 345
E I+N+ +D +T + K+ ++++ +P A P+ + +Y
Sbjct: 246 EGKLGEIYNIGTDFEMTNIELTKMIHSTVS---KLLNREPTAPTFAPIPDRPYHDRRYYI 302
Query: 346 EPRAAKDILGWRSTTNLPEDLKERFEEYVKI 376
+ ++ +GW+ TT E L + E YVK+
Sbjct: 303 DFSKIRNAMGWQCTTPFSEGLMKTIEYYVKL 333
>gi|325679491|ref|ZP_08159071.1| NAD dependent epimerase/dehydratase family protein [Ruminococcus
albus 8]
gi|324108778|gb|EGC03014.1| NAD dependent epimerase/dehydratase family protein [Ruminococcus
albus 8]
Length = 337
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 107/283 (37%), Gaps = 72/283 (25%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+L + GG I + K L GHE+ ++ G N E +S K
Sbjct: 2 KILFI----GGTGTISMAITKRLAEEGHELYLLNRGSRN-------------EGLSGNIK 44
Query: 136 TVW---GDPAEVGNVVGGVTFDVVLDNNG---KNLDAVRPVADWAKSSG-VKQFLFISSA 188
+ D + ++ G+ FD V + G + L+ D+ G KQF++ISSA
Sbjct: 45 YITTDINDEEKTAKLLDGLEFDCVGEFIGFVPQQLER-----DYRLFGGRTKQFIYISSA 99
Query: 189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN----FSNWASFRPQYMIGSGNNK---- 240
Y+ KP G+V E+ EN +S +Y++G +K
Sbjct: 100 SAYQ-------------KPPKGYVITEETPLENPYWEYSRNKKACEEYLMGLYRDKGFPV 146
Query: 241 --------------------DCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 279
D W RI +PV I G G I H D +
Sbjct: 147 TIVRPSHTYDERSVPLGVHGDGGSWQVVKRIKEGKPVIIHGDGTSLWTITHNSDFAKAYA 206
Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
V NP+A +F++ SD +V+ + + A+A G+ ++ H
Sbjct: 207 GLVGNPKAI-GEVFHITSDESVSWNEIYGYIAEALGVQLKAYH 248
>gi|427717553|ref|YP_007065547.1| UDP-glucuronate 4-epimerase [Calothrix sp. PCC 7507]
gi|427349989|gb|AFY32713.1| UDP-glucuronate 4-epimerase [Calothrix sp. PCC 7507]
Length = 315
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 23/221 (10%)
Query: 162 KNLDAVRPVADWAKSS-GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 220
+NL+A + + + AK++ G+K+ +F S++ +Y A+ P EG P + + + K +E
Sbjct: 101 RNLNATQILLEAAKNAKGLKRLVFASTSSVYGDAETLPTHEGICPLPVSPY-GITKLAAE 159
Query: 221 NFSN---------WASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAH 270
+ + R + G D FF I++ +PI G G Q +
Sbjct: 160 RLCGLYHKNFGVPFVALRYFTVYGPRQRPDMAFHKFFKAILQDEAIPIYGDGQQTRDFTF 219
Query: 271 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 330
+ D + A PEA IFN+ V L + + G P++ H + KA G
Sbjct: 220 ISDAVAANLAAATVPEAVGE-IFNIGGGSRVVLKEVLDTIEEIVGKPIKRNHIE-KAMG- 276
Query: 331 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 371
DA+ H A+ A+ ILG++ +L + L + +E
Sbjct: 277 DAR--------HTAADVSKAQKILGYQPQVSLRDGLTQEWE 309
>gi|46446796|ref|YP_008161.1| hypothetical protein pc1162 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400437|emb|CAF23886.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 269
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
W DR++R PG+G Q TN+ H+ D+ L A++N IFNL +D +
Sbjct: 162 RWITDRVIRMHQYSFPGTGNQLTNVIHLTDIVRALDFALQNKLHG---IFNLCNDFHIPR 218
Query: 304 DGMAKLCAQAAGLP 317
+ Q+A LP
Sbjct: 219 KLFYEQLLQSAHLP 232
>gi|288922380|ref|ZP_06416571.1| NAD-dependent epimerase/dehydratase [Frankia sp. EUN1f]
gi|288346287|gb|EFC80625.1| NAD-dependent epimerase/dehydratase [Frankia sp. EUN1f]
Length = 349
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 132/343 (38%), Gaps = 77/343 (22%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI----------VSAG 133
+GG IG ++ LL +GHEV + + + + P + EI AG
Sbjct: 6 TGGSGFIGGHVVDRLLDAGHEVLSLDLATCS----RPDPRAVYREIDVLDIEALTDAFAG 61
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGK----NLDAVRPVADWAKSSGVKQFLFISSAG 189
+ V+ ++ G D + + N++ V + A+ +GV++ +F S+
Sbjct: 62 VEVVF-------HIAGMSNVDFAFADPVRTVRLNVEGTGKVCEAARHAGVRRVIFASTVW 114
Query: 190 IYKPA---------DEP---------PHVEG----------DVVKPDAGHVQ-------- 213
+Y A +P PH +G +V AGHV
Sbjct: 115 VYGAAADPADLADRSDPSGGRIPPPSPHADGPEPDPLTEDAQIVLARAGHVYTSTKLAAE 174
Query: 214 --VEKYISENFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAH 270
++ Y+ + R G G ++ F + + RP+ + G G QF +
Sbjct: 175 LLLQSYLQTYGLAFTILRYGIPYGPGMREELVLARFVNNAMAGRPLTVAGDGRQFRKYVY 234
Query: 271 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 330
VRDL+ LA+ + AA + L + V++ MA+ A A P + P G
Sbjct: 235 VRDLADAHVLALAD--AAENTTIALEGNERVSVLEMAQ--AVQAYFPSVAIERIPARPG- 289
Query: 331 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 373
FR A+ RAA +LGWR TT + +++ E Y
Sbjct: 290 ------DFRGREISAQ-RAAH-LLGWRPTTPFRDGVRQYIEWY 324
>gi|374293701|ref|YP_005040724.1| putative NAD-dependent epimerase/dehydratase [Azospirillum
lipoferum 4B]
gi|357427104|emb|CBS90042.1| putative NAD-dependent epimerase/dehydratase [Azospirillum
lipoferum 4B]
Length = 314
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 109/291 (37%), Gaps = 62/291 (21%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM-----------------TVGD-ENSDKMKKPPFNR 125
+GG IG +LA LL GH VTI+ VGD + D +++
Sbjct: 7 TGGCGFIGSHLADRLLADGHRVTILDNLSSGRLDNKPEAANLVVGDVADPDAVREAMAGD 66
Query: 126 FNEIVSA-----------GGKTVWGDPAEVGNVVGGVT-FDVVLDNNGKNLDAVRPVADW 173
E V + +W + N++G VT F+ D
Sbjct: 67 HGEGVDGVFHLAAVASVQKSQELWAETHRT-NLLGTVTVFEAARD--------------- 110
Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA------- 226
AK G ++ SSA IY P E ++ +P + + V+K E + A
Sbjct: 111 AKRGGPIPVVYASSAAIYGDNTNTPLKEDELPRPLSAY-GVDKLGCEMHARIAWSIQGVP 169
Query: 227 --SFRPQYMIGSGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 279
FR + G + F R+ R V I G G Q + V D+ +L
Sbjct: 170 TVGFRFFNVYGPRQDPMSPYSGVISIFARRVARGEDVEIHGDGQQVRDFVFVGDVVRILA 229
Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 330
LA+E A + ++NL + RA +L + + + G V H +P+A I
Sbjct: 230 LAMER-RFAGAQVYNLCTGRATSLVMLLDVLQELCGSNVRRRHSEPRAGDI 279
>gi|302531552|ref|ZP_07283894.1| predicted protein [Streptomyces sp. AA4]
gi|302440447|gb|EFL12263.1| predicted protein [Streptomyces sp. AA4]
Length = 309
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP--------DAGHVQVEKYISENFSNW 225
A GV++ +F SSA +Y ++ P E D + P AG + Y +W
Sbjct: 109 AADEGVERLVFASSASVYGEPEKLPMHEDDKLNPLTPYCISKRAGEDLLGFYERTKGLSW 168
Query: 226 ASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
+ R + G G + F R+ +P I G+G Q + HV DL+ +
Sbjct: 169 NALRFFNVYGPGQKIEAYYTSVINHFIQRLRAGQPPIIDGAGDQSMDFVHVTDLAKGVVA 228
Query: 281 AVENPEAASSNI-FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
A+E+ + SN+ N+ + ++ +AK+ +A G+ VE V ++ + + + A R
Sbjct: 229 ALESEQ---SNLPINIGTGIDTSIATLAKILIEAVGVDVEPV-FNKRDVLVSRRAADITR 284
Query: 340 NMHFYAEPRAAKDILGWRSTTNLPEDLK 367
A+++LGW + + E ++
Sbjct: 285 ----------AREVLGWEPSITVEEGMR 302
>gi|77460275|ref|YP_349782.1| NAD-dependent epimerase/dehydratase [Pseudomonas fluorescens Pf0-1]
gi|77384278|gb|ABA75791.1| putative UDP-glucose 4-epimerase [Pseudomonas fluorescens Pf0-1]
Length = 320
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 113/285 (39%), Gaps = 43/285 (15%)
Query: 113 ENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVAD 172
E D+ P N + IV A + +V+ + D + + N+D +A
Sbjct: 51 ELGDQAALPDLNGIDVIVHAAARV---------HVMDDSSSDPLAEYRRVNVDGTLQLAQ 101
Query: 173 WAKSSGVKQFLFISSAGIYKPADEP--PHVEGDVVKPD--------AGHVQVEKYISENF 222
A ++GVK+F+FISS + EP P D P + ++K E
Sbjct: 102 QASAAGVKRFIFISSIKVNGEQTEPDRPFTALDRPMPKDPYGVSKLEAELALQKLAQETG 161
Query: 223 SNWASFRPQYMIGSG---NNKDCEEWFFDRIVRKRPVPIP-GSGMQFTNIAHVRDLSSML 278
RP + G G N W + VP+P G+ ++ + +L ++
Sbjct: 162 MEVVIIRPPLVYGPGVRANFLSMMRWL------DKGVPLPFGAIDNRRSLVSLTNLVDLV 215
Query: 279 TLAVENPEAASSNIFNLVSD-----RAVTLDGMAKLCAQAAG---LPVEIVHYDPKAAGI 330
+++P+AA +F LVSD L GMA+ + A LP ++ + K G
Sbjct: 216 VTCIDHPKAA-GQVF-LVSDGEDLSTTTLLSGMARALGKTAALVPLPAVLLTWPAKLLG- 272
Query: 331 DAKKAFPFRNM-HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 374
K A R + R +++LGW + + L++ + Y+
Sbjct: 273 --KGALAQRLCGSLQVDIRHTREVLGWTPPSRVERALRQTADYYL 315
>gi|384181086|ref|YP_005566848.1| putative NAD dependent epimerase/dehydratase family protein
[Bacillus thuringiensis serovar finitimus YBT-020]
gi|324327170|gb|ADY22430.1| putative NAD dependent epimerase/dehydratase family protein
[Bacillus thuringiensis serovar finitimus YBT-020]
Length = 328
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 95/248 (38%), Gaps = 45/248 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVT-------IMTVGDENSDKMKKPPFNRFNEIV------ 130
+GG +G LA L G+EVT I V ++N + P +V
Sbjct: 6 TGGTGFLGQKLAFRLKNMGYEVTATGRNKTIGKVLEQNGIEFVHCPLEDRERVVQVCKDK 65
Query: 131 -----SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
S + WG + N N+ + + + ++ G+K+ + +
Sbjct: 66 DYIFHSGALSSPWGKYEDFYNA---------------NVLGTKHIIEGSQKYGIKRLIHV 110
Query: 186 SSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISENFSNWA--------SFRPQYMIG 235
S+ IY DE +V + PD H KYI+E + A + RP+ + G
Sbjct: 111 STPSIYFYYDERQNVVENAKLPDTFVNHYATTKYIAEQAIDQAFVHGLPVITIRPRALFG 170
Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
G+N ++ K +P G+ +I +V ++ L L + +P+ +N+
Sbjct: 171 PGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVENVVDALLLCMHSPKHTLGQKYNI 228
Query: 296 VSDRAVTL 303
+D + L
Sbjct: 229 TNDERINL 236
>gi|261409971|ref|YP_003246212.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. Y412MC10]
gi|261286434|gb|ACX68405.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. Y412MC10]
Length = 338
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 112/275 (40%), Gaps = 38/275 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG I + K+LL G E+ ++ G+ N D + + I+ A D +V
Sbjct: 7 GGTGTISTAITKQLLEQGCELYLLNRGNRN-DTLPEGA-----HILQADIH----DEDQV 56
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVA---DWAKSSG-VKQFLFISSAGIYK-PADEPPH 199
++ + FDVV D A P D+ +G KQF+FISSA Y+ P +
Sbjct: 57 AKLIEHLDFDVVAD-----FIAFEPAHLERDYRLFAGKTKQFIFISSASAYQTPLSDYRI 111
Query: 200 VEGD-VVKPDAGH----VQVEKYISENFSNWA----SFRPQYM-----IGSGNNKDCEEW 245
EG + P + + E Y+ + RP + I G + W
Sbjct: 112 TEGTPLSNPYWAYSRNKIACEDYLMNQYREHGFPVTIVRPSHTYDERSIPLGVHGSQGSW 171
Query: 246 -FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
R++ +PV I G G + H RD + + N A ++ ++ SD ++T +
Sbjct: 172 QVVKRMLENKPVLIHGDGTSLWTLTHNRDFAKGFIGLMGNIHAIGESV-HITSDESLTWN 230
Query: 305 GMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
+ ++ A A G+ + VH + +DA FR
Sbjct: 231 QIYEIIADALGVQLNAVHVSSEF--LDATSTQDFR 263
>gi|335043538|ref|ZP_08536565.1| nucleoside-diphosphate-sugar epimerase [Methylophaga
aminisulfidivorans MP]
gi|333790152|gb|EGL56034.1| nucleoside-diphosphate-sugar epimerase [Methylophaga
aminisulfidivorans MP]
Length = 316
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 27/229 (11%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGI--YKPADE-PPHVEGDVVKPDAGHVQVEKYIS 219
N++ R +A A +GVK F+FISS + + +D P E D+ P+ + K +
Sbjct: 92 NVELTRVLASQAAIAGVKHFIFISSIKVNGEETSDTLKPFCETDIPLPEDEYAH-SKLAA 150
Query: 220 ENF-------SNWAS--FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ-FTNIA 269
EN SN A RP + G G + E+ ++VRK +P+P + M+ + ++
Sbjct: 151 ENHLKTICHASNMAYTIIRPPLVYGPGVKGNFEKLI--KLVRK-GLPLPFAKMKNWRSVL 207
Query: 270 HVRDLSSMLTLAVENPEAASSNIFNLVSDR-AVTLDGMAKLCAQAAGLPVEIVHYDPKA- 327
+ +L+ + +ENP+A + L++D+ V+ G+ ++A + + Y PK
Sbjct: 208 AIDNLTDFIWTCIENPKAKNETF--LIADKDDVSTTGLLIAISEAYKKSLRL-FYIPKTP 264
Query: 328 -----AGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 371
I K + AK +LGW ++LP L++ E
Sbjct: 265 LRWLLVCIGKKNIYRKLYSCLIVRKDKAKVLLGWEPISDLPSQLRKMVE 313
>gi|30263172|ref|NP_845549.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Ames]
gi|47528537|ref|YP_019886.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus anthracis
str. 'Ames Ancestor']
gi|49186021|ref|YP_029273.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus anthracis
str. Sterne]
gi|65320500|ref|ZP_00393459.1| COG0451: Nucleoside-diphosphate-sugar epimerases [Bacillus
anthracis str. A2012]
gi|165868985|ref|ZP_02213645.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0488]
gi|167632587|ref|ZP_02390914.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0442]
gi|167637345|ref|ZP_02395625.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0193]
gi|170684995|ref|ZP_02876220.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0465]
gi|170705185|ref|ZP_02895650.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0389]
gi|177650008|ref|ZP_02933009.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0174]
gi|190564869|ref|ZP_03017790.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Tsiankovskii-I]
gi|227813963|ref|YP_002813972.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. CDC 684]
gi|229604184|ref|YP_002867437.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0248]
gi|254685779|ref|ZP_05149638.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. CNEVA-9066]
gi|254723186|ref|ZP_05184974.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A1055]
gi|254738249|ref|ZP_05195952.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Western North America USA6153]
gi|254742583|ref|ZP_05200268.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Kruger B]
gi|254752564|ref|ZP_05204600.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Vollum]
gi|254761080|ref|ZP_05213104.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Australia 94]
gi|386736967|ref|YP_006210148.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. H9401]
gi|421510197|ref|ZP_15957094.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. UR-1]
gi|421636826|ref|ZP_16077424.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. BF1]
gi|30257806|gb|AAP27035.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Ames]
gi|47503685|gb|AAT32361.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. 'Ames Ancestor']
gi|49179948|gb|AAT55324.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Sterne]
gi|164715711|gb|EDR21228.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0488]
gi|167514852|gb|EDR90218.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0193]
gi|167532885|gb|EDR95521.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0442]
gi|170130040|gb|EDS98902.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0389]
gi|170671255|gb|EDT21993.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0465]
gi|172083960|gb|EDT69019.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0174]
gi|190564186|gb|EDV18150.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Tsiankovskii-I]
gi|227006746|gb|ACP16489.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. CDC 684]
gi|229268592|gb|ACQ50229.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0248]
gi|384386819|gb|AFH84480.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. H9401]
gi|401819787|gb|EJT18960.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. UR-1]
gi|403395622|gb|EJY92860.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. BF1]
Length = 328
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 95/248 (38%), Gaps = 45/248 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVT-------IMTVGDENSDKMKKPPFNRFNEIV------ 130
+GG +G LA L G+EVT I V ++N K P ++
Sbjct: 6 TGGTGFLGQKLAFRLKNMGYEVTATGRNKTIGKVLEQNGIKFVHCPLEDRERVLQVCKDK 65
Query: 131 -----SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
S + WG + N N+ + + + ++ G+K+ + +
Sbjct: 66 DYIFHSGAHSSPWGKYEDFYNA---------------NVLGTKHIIEGSQKYGIKRLIHV 110
Query: 186 SSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISENFSNWA--------SFRPQYMIG 235
S+ IY DE +V + PD H KY++E + A + RP+ + G
Sbjct: 111 STPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAEQAIDQAFAHGLPVITIRPRALFG 170
Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
G+N ++ K +P G+ +I +V ++ L L + +P+ +N+
Sbjct: 171 PGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVENVVDALLLCMHSPKHTLGQKYNI 228
Query: 296 VSDRAVTL 303
+D + L
Sbjct: 229 TNDERINL 236
>gi|448475818|ref|ZP_21603173.1| NAD-dependent epimerase/dehydratase [Halorubrum aidingense JCM
13560]
gi|445816036|gb|EMA65945.1| NAD-dependent epimerase/dehydratase [Halorubrum aidingense JCM
13560]
Length = 338
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 111/272 (40%), Gaps = 47/272 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
+VLI+ GG +I +A++L+ +GHEV T G ++D P RF G +
Sbjct: 2 RVLII----GGTGLISTGIARQLVAAGHEVVAFTRGTTDADV---PEAVRFRH----GDR 50
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK--P 193
+ D + V V D V+D + R D A + Q++F S+ +Y+ P
Sbjct: 51 SRRED---LDRVAAEVDPDCVIDMVCFGPETARDAVD-AFAGVADQYVFCSTVDVYRRPP 106
Query: 194 ADEP-----PHVEGDVVKPDAGHVQVEKYISENFSN-------------WASFRPQ---- 231
AD+P P P + + + + F + W+++ +
Sbjct: 107 ADQPITESAPRESETDAAPVSDYAADKAAAEDVFFDAHGDAFATTVIRPWSTYGDRGPVL 166
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ +GSG ++ DRI +PV + G G H D++ AV N +A
Sbjct: 167 HTLGSGT------YYLDRIREGKPVIVHGDGTALWGPCHRDDVAGAFVGAVGNA-SAHGE 219
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVH 322
+++ S +T + + A A P E+VH
Sbjct: 220 AYHVTSGEPMTWNQYHRRVASALDAPEPELVH 251
>gi|409398039|ref|ZP_11248891.1| epimerase [Pseudomonas sp. Chol1]
gi|409117545|gb|EKM93973.1| epimerase [Pseudomonas sp. Chol1]
Length = 309
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 122/308 (39%), Gaps = 51/308 (16%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK---PPFNRFNEIV 130
++ VLI +GG IG L LL G+ V ++ +N K+ P +R IV
Sbjct: 3 ERPVLI----TGGAGFIGSNLVDALLARGYAVRVL----DNLSTGKRSNLPDDSRLELIV 54
Query: 131 SAGGKTVWGDPAEVGNVVGGV--------------TFDVVLDNNGKNLDAVRPVADWAKS 176
D A V + G + D L + NL V + ++
Sbjct: 55 GD-----VADAACVRQALQGCRAVVHLAAVASVQASVDDPLGTHQSNLIGTLNVCEAMRA 109
Query: 177 SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS 236
GV++ LF SSA +Y E ++ D K +K SE++ ++ +R Q+ +
Sbjct: 110 EGVRRVLFASSAAVYGNNGEGEAIDEDTPKAPLTPYAADKLASEHYLDF--YRRQHGLEP 167
Query: 237 ---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
G +D F +R + P+ + G G Q + +V DL +L
Sbjct: 168 VVFRFFNIFGPRQDPSSPYSGVISIFTERAQKGLPIVVFGDGEQTRDFVYVGDLVEVLVQ 227
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA-AGLPVEIVHYDPKAAGIDAKKAFPFR 339
A+E+ EA + N+ RA +L+ + + + GLP + + P+ I +A R
Sbjct: 228 ALESSEAVEGAV-NVGLSRATSLNQLLEAIGEVLGGLPA-VTYQAPRPGDIRHSRANNTR 285
Query: 340 NMHFYAEP 347
+ Y P
Sbjct: 286 LLQRYRLP 293
>gi|417916562|ref|ZP_12560139.1| NAD dependent epimerase/dehydratase family protein [Streptococcus
mitis bv. 2 str. SK95]
gi|342829453|gb|EGU63807.1| NAD dependent epimerase/dehydratase family protein [Streptococcus
mitis bv. 2 str. SK95]
Length = 326
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 138/351 (39%), Gaps = 77/351 (21%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEV---------------TIMTV--GDENSDK 117
KKVL+ +G +G Y+ +EL G++V +++T GD +
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQQGYQVRAFGRNPKAGQSLENSLVTFFQGDLTKQE 57
Query: 118 MKKPPFNRFNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ +V AG TVWG P E D N+ + V D +
Sbjct: 58 DLAQACQGMDMVVHAGALSTVWG-PWE--------------DFYQTNVLGTKYVLDACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P D+ E D + + + YI ++ F
Sbjct: 103 TGIQRLVYVSSPSIYAAPRDQLAIKESDAPQEN----NLNNYIRSKLASEKLFKDYHDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 159 SIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAFPFRNMHF 343
P+ AS ++N+ + + + + P+ P + I + F ++ +
Sbjct: 217 PQ-ASGEVYNITNGEPRAFKDLIEETLRGLDYPITYRKVPAPLLSVIASSLEFLYKVLKL 275
Query: 344 YAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 375
EP +A +D LG+R ++ E +++ ++Y K
Sbjct: 276 KGEPPLTRYTYYLLRYSQTLDISKAERD-LGYRPQISISEGIEQYVQDYRK 325
>gi|402772644|ref|YP_006592181.1| NAD dependent epimerase/dehydratase family protein [Methylocystis
sp. SC2]
gi|401774664|emb|CCJ07530.1| NAD dependent epimerase/dehydratase family protein [Methylocystis
sp. SC2]
Length = 337
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 34/238 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG G L +LL SG++VT+ V D + P + N V G D A+
Sbjct: 11 TGGAGYCGSRLVPQLLRSGYKVTVYDVMYFGCDFL---PKDDPNLTVIQGD---IRDQAK 64
Query: 144 VGNVVGG---------VTFDVVLDNNGK-----NLDAVRPVADWAKSSGVKQFLFISSAG 189
+ V G ++ D + + + NL+A P+ AK++GVK+F++ SS+
Sbjct: 65 LAAAVAGHDAFLSLACISNDASFELDERLSTSVNLEAFEPMVLTAKNAGVKRFIYASSSS 124
Query: 190 IYKPADEPPHVEGDVVKPDAGHVQ--------VEKYISENFSNWASFRPQYMIGSGNNKD 241
+Y +D+P E + P + + + K+I + F+ +FRP + G +
Sbjct: 125 VYGVSDQPEVTEDHPLVPLTLYNKYKGMCEPLLNKHIDDGFTG-VTFRPATVCGYAPRQR 183
Query: 242 CE---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNL 295
+ + V K + + G G Q HV+D + + ++ P E IFN+
Sbjct: 184 LDLSVNILTNHAVNKNRITVFG-GSQLRPNLHVQDYVDAVEMFLQAPAEKIQGEIFNV 240
>gi|392394625|ref|YP_006431227.1| nucleoside-diphosphate-sugar epimerase [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390525703|gb|AFM01434.1| nucleoside-diphosphate-sugar epimerase [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 324
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 129/316 (40%), Gaps = 40/316 (12%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP--PFNRFNEIVSAG 133
KVL+ +GG IG +L + L+ G EV+I+ M P F+ +I S
Sbjct: 2 KVLV----TGGAGFIGSHLVESLVCQGIEVSIIDNLVSGQSCMSHPLVAFHHM-DICSRD 56
Query: 134 GKTVW--GDPAEVGNVVGGVTFDVVLDN---NGK-NLDAVRPVADWAKSSGVKQFLFISS 187
K V P V ++ L + + K N+ + + + + V++ +F S+
Sbjct: 57 AKAVIIREKPDVVFHLAAQTDVRKSLQDPQYDAKVNICGTINLLEACREAKVRKLIFTST 116
Query: 188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS---------NWASFRPQYMIGSGN 238
+ +Y + P E D V P + + K+ +E++ ++ R + G G
Sbjct: 117 SAVYGDLHKEPISEEDPVAP-ISYYGLSKWAAESYILLFHQLYGISYTILRFSNVYGPGQ 175
Query: 239 NKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
E F D I K+ + I G G Q + +V+D+ + AVE + I
Sbjct: 176 IAKGEGGVVAVFLDHIHAKKTLNIHGDGAQTRDFVYVKDVVRAIQAAVERGD---QEIIQ 232
Query: 295 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 354
+ S +++ + + ++ G EI+H P G D K H + R A ++L
Sbjct: 233 VSSSGKTSVNQLVSMLSRIHGSAFEIIH-TPANQG-DVK--------HSCLDNRKAYELL 282
Query: 355 GWRSTTNLPEDLKERF 370
W+ +LP+ L +
Sbjct: 283 QWQPLIDLPDGLATTY 298
>gi|312793329|ref|YP_004026252.1| nad-dependent epimerase/dehydratase [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180469|gb|ADQ40639.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 305
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 102/233 (43%), Gaps = 26/233 (11%)
Query: 154 DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH-- 211
D LD + L V + D+ VK+F+F SSA +Y + P E ++P++ +
Sbjct: 83 DAYLDCSINVLGTVN-LLDYCAKYKVKKFIFASSAAVYGEPEYIPIDENHPLRPESFYGL 141
Query: 212 --VQVEKYI---SENFS-NWASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGS 261
+ E+YI + NF+ + FR + G + E F +R+ + V I G
Sbjct: 142 SKLTSEEYIKMFAHNFNFEYIIFRYSNVYGPRQDPFGEGGVVSIFCERMQSSKNVIIFGD 201
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
G Q + +V D++ +A+ E + S FNL + + V+++ + ++ + G V
Sbjct: 202 GTQTRDFIYVEDVAEANCVAL---ETSVSGTFNLSTGKNVSVNELFEILSGLTGYKKSPV 258
Query: 322 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 374
Y PK G A H K +LG+ +L E LK+ E ++
Sbjct: 259 -YQPKRPGDIA---------HSCLSNNLLKSVLGFSPQFSLLEGLKKTVEYFI 301
>gi|428298238|ref|YP_007136544.1| UDP-glucuronate 4-epimerase [Calothrix sp. PCC 6303]
gi|428234782|gb|AFZ00572.1| UDP-glucuronate 4-epimerase [Calothrix sp. PCC 6303]
Length = 315
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 21/220 (9%)
Query: 162 KNLDAVRPVADWAK-SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEK 216
+N++A + + + AK ++ +K+ +F SS+ +Y A+ P EG P + + + E
Sbjct: 101 RNINATQILLEAAKDATTLKRLVFASSSSVYGDAETFPTHEGICPAPVSPYGITKLAAES 160
Query: 217 YISENFSNWA----SFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHV 271
+ N+ + R + G D FF ++ + +P+ G G Q + +V
Sbjct: 161 LCGLYYKNFGVPFVALRYFTVYGPRQRPDMAFHKFFKAVIEDQAIPVFGDGEQTRDFTYV 220
Query: 272 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID 331
D + A PEA IFN+ V L + + Q G P++ D +A G D
Sbjct: 221 SDAVAANLAAATIPEAV-GQIFNIGGGSRVILSEVLNMMEQIVGKPIKRNFID-RAIG-D 277
Query: 332 AKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 371
A+ H A+ A+ +LGW+ +L E L + ++
Sbjct: 278 AR--------HTGADIFKAQKLLGWQPQVSLREGLSQEWQ 309
>gi|402488593|ref|ZP_10835403.1| NAD-dependent epimerase/dehydratase [Rhizobium sp. CCGE 510]
gi|401812440|gb|EJT04792.1| NAD-dependent epimerase/dehydratase [Rhizobium sp. CCGE 510]
Length = 326
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 110/278 (39%), Gaps = 49/278 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVL + GG I + + + GH V++ G ++ P IV G
Sbjct: 4 KVLFI----GGTGQISYPCVERAVAQGHHVSVYNRGLRSN-----PLPEGVTSIVGELGS 54
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAV-RPVADWAKSSGVKQFLFISSAGIYKPA 194
+ + D A+ +DVV D V R + +A + G Q++FISSA +Y
Sbjct: 55 SSYADLAKA-------NYDVVCQFIAFTPDQVGRDIEVFAGNCG--QYIFISSASVY--- 102
Query: 195 DEPPH-----VEGDVVKPDAGHVQVEKYISENFSN-----WASFRPQYMIGSG-----NN 239
++PP E + P + Q + E W RP + + +G +
Sbjct: 103 EKPPRHYVITEETPAINPYWPYSQAKIACEELLKKSSNLAWTIVRPSHTVRTGLPIMMGD 162
Query: 240 KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
D R++ P + G G + D + + + EAA + IF++ SDR
Sbjct: 163 SDV---MARRMLDGEPTIVAGDGHTPWTLTRAVDFAVPF-VGLFAKEAALNEIFHITSDR 218
Query: 300 AVTLDGMAKLCAQAAGLPVEIVH--------YDPKAAG 329
A D + K A+ G+ +IVH Y+P+ AG
Sbjct: 219 AHIWDDIQKTIARLLGVEAKIVHIPTDTLIRYNPEWAG 256
>gi|229588039|ref|YP_002870158.1| putative lipopolysaccharide biosynthesis-related
epimerase/dehydratase [Pseudomonas fluorescens SBW25]
gi|229359905|emb|CAY46759.1| putative lipopolysaccharide biosynthesis-related
epimerase/dehydratase [Pseudomonas fluorescens SBW25]
Length = 308
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 116/283 (40%), Gaps = 39/283 (13%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIVS 131
K+VLI +GG IG +L LL G+ V ++ + G ++ + P V+
Sbjct: 3 KQVLI----TGGAGFIGSHLVDALLAKGYGVRVLDNLSTGKRSNLPLHDPRVELLEGDVA 58
Query: 132 --------AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL 183
A G T A V +V V D + + N V + + +GVK+ +
Sbjct: 59 DADLVARAAVGATAVVHLAAVASVQASV--DDPVSTHQSNFVGTLNVCEAMRKAGVKRVV 116
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS------- 236
+ SSA +Y E ++ + K +K SE++ ++ +R Q+ +
Sbjct: 117 YASSAAVYGNNGEGASIDEETTKAPLTPYASDKLASEHYFDF--YRRQHGLEPVIFRFFN 174
Query: 237 --GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
G +D F +R+ + P+ + G G Q + +V DL +L A+E P A
Sbjct: 175 IFGPRQDPSSPYSGVISIFSERVQQGVPIAVFGDGEQTRDFMYVEDLVDVLVQAIEAP-A 233
Query: 288 ASSNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
A N+ +R TL + + + G LP + Y P +G
Sbjct: 234 APLGAINVGWNRTTTLKQVLQALEEVVGTLPT--ITYGPARSG 274
>gi|406908349|gb|EKD48880.1| NAD-dependent epimerase/dehydratase [uncultured bacterium]
Length = 354
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 114/265 (43%), Gaps = 41/265 (15%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK--PPFNRFNEIV 130
+ K VL+ +GG IG ++ ++L+ G VTI+ D+ S K PFN ++
Sbjct: 39 KNKPVLV----TGGCGFIGSHIVEQLVACGARVTII---DDLSTGFKDNIAPFNNSVTLI 91
Query: 131 SAGGKTVWGDPAEVGNVVGG--VTFDVV--------LDN----NGKNLDAVRPVADWAKS 176
DPA V G + F + ++N + N+D + + A++
Sbjct: 92 QKN----ITDPAACEQAVAGNEIIFHLAAFTSVPGSVENPALCHSINVDGIFNLLHAARN 147
Query: 177 SGVKQFLFISSAGIYKP-ADEPPHVEGDV--VKPDAGHVQVEKYISENFS---NWASFRP 230
GV++F+F S++ +Y P D + D+ V P + + + FS N
Sbjct: 148 HGVQRFVFSSTSSVYGPREDVCRETDADLQPVSPYGATKLMGELYCKQFSLLFNVPCVML 207
Query: 231 QY--MIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
+Y + G N D F R+ R P+ I G G Q + HV +++ +A
Sbjct: 208 RYFNVYGPRQNPDSHYAAAVAKFKQRMERNEPLTIFGDGTQTRDFVHVHEVAHANLIAGM 267
Query: 284 NPEAASSN-IFNLVSDRAVTLDGMA 307
P+ N I+N+ + R++++ +A
Sbjct: 268 APQKMVENQIYNIGTGRSISILQLA 292
>gi|240144730|ref|ZP_04743331.1| NAD-dependent epimerase/dehydratase family protein [Roseburia
intestinalis L1-82]
gi|257203251|gb|EEV01536.1| NAD-dependent epimerase/dehydratase family protein [Roseburia
intestinalis L1-82]
Length = 304
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 116/278 (41%), Gaps = 47/278 (16%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK++I N IG A E +E+T + + D + + + + N
Sbjct: 2 KKMIITGVN----GFIG-RCAMEYFSKDYEITGIDLADRYCEDGAEIHYYQCN------- 49
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGK-NLDA--VRPVADW------------AKSSGV 179
+ D E+ N+ GV DV+L G N+ A V P+AD A S
Sbjct: 50 --MSKDSQELANIFTGVQPDVILHCAGSANVGASIVNPMADLDGNLHSLYQLLLALQSFE 107
Query: 180 KQ--FLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI--- 234
K+ +F+SSAG+Y + P E D + P + + V K + E ++ + Y I
Sbjct: 108 KRPKIIFLSSAGVYGNPKQLPITEKDALAPISPY-GVHKQMGEELCSYYNRVHGYHIRCV 166
Query: 235 ------GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL--SSMLTLAVENPE 286
GSG K + + + + + G+G + + H+ D+ + L L + PE
Sbjct: 167 RIFSAYGSGLRKQLLWDIYQKYLNTGRIDLFGTGNETRDFIHISDILRALELILGYQGPE 226
Query: 287 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
IFN+ + V++ +A++ A G +IV ++
Sbjct: 227 ----EIFNVANGEEVSIRELAEIYAAQLGEKTDIVRFN 260
>gi|392402383|ref|YP_006438995.1| NmrA family protein [Turneriella parva DSM 21527]
gi|390610337|gb|AFM11489.1| NmrA family protein [Turneriella parva DSM 21527]
Length = 288
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 101/250 (40%), Gaps = 52/250 (20%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPFN----RFN-EI 129
KVLI +G +G + K L G HE+ I+ V D+ + + P N RF+ E
Sbjct: 3 KVLI----TGATGNVGLEVLKALSGIKHELQIIAGVRDQQTGATQLPGHNIQIARFDFEN 58
Query: 130 VSAGGKTVWG-------DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQF 182
V++ G + G P ++ +V +P+ K++GVK
Sbjct: 59 VNSFGSALQGCDILFLLRPPQISDVK----------------TYFKPLIRECKAAGVKHI 102
Query: 183 LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC 242
+F+S G+ K P H ++EK I E+ RP Y + ++
Sbjct: 103 VFLSVQGVEKSRIIPHH-------------KIEKLIVESQIAHTFLRPAYFM-----QNF 144
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
D IV+KR V +P +FT I V D+ + + N A + ++L +D +
Sbjct: 145 TTTLRDDIVKKRRVYLPAGDAKFTLI-DVADIGRVAAAILANSTAHINKAYDLTNDEKLN 203
Query: 303 LDGMAKLCAQ 312
M + ++
Sbjct: 204 FREMTDILSR 213
>gi|299068339|emb|CBJ39563.1| putative NADH dehydrogenase (ubiquinone) [Ralstonia solanacearum
CMR15]
Length = 334
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 222
++D R V D + GVK+ L +S+ G PA + K D E+ ++++
Sbjct: 112 HVDLPRRVVDACRRHGVKRLLHMSALGA-DPAGPSMYQRS---KGDG-----ERIVTDSG 162
Query: 223 SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLA 281
+W FRP + G G D F R+ R P VP+ + +F + +V D++ A
Sbjct: 163 LDWTVFRPSVVFGPG---DHFLNLFARLQRLAPFVPLARAEARFQPV-YVDDVAVAFAHA 218
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
++NP A +++ LV R TL + + A+G P IV
Sbjct: 219 LDNP-ATFGHVYPLVGPRVYTLAELVRFAGTASGHPRWIV 257
>gi|295835463|ref|ZP_06822396.1| GDP-L-fucose synthetase [Streptomyces sp. SPB74]
gi|295825502|gb|EDY43378.2| GDP-L-fucose synthetase [Streptomyces sp. SPB74]
Length = 317
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 125/333 (37%), Gaps = 64/333 (19%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPF---NRFNE 128
E+ ++ + +G ++G +A+ L GHEV T + D + R +
Sbjct: 13 ERARIFV----AGHRGLVGSAVARRLGADGHEVLTRTRTALDLRDAAATAAYLRETRPDA 68
Query: 129 IVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA 188
+V A K VG ++ T+ V +NL V A ++GV++ LF+ S+
Sbjct: 69 VVLAAAK--------VGGIMANSTYPVQFLE--ENLQIQLSVIAGAHAAGVERLLFLGSS 118
Query: 189 GIY-KPADEPPHVEGDVVKP------------DAGHVQVEKYISENFSNWASFRPQYMIG 235
IY K A +P H + + P AG QV Y S+ + + S P + G
Sbjct: 119 CIYPKHAPQPIHEDALLTGPLEPTNQAYALAKIAGITQVRSYRSQYGAAYISAMPTNLYG 178
Query: 236 SGNNKDCE-EWFFDRIVR---------KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
G+N D E +VR + V + GSG HV DL++ L + +
Sbjct: 179 PGDNFDLETSHVLPALVRRFHEAKAEGREEVVLWGSGSPRREFLHVDDLAAACVLLLRSY 238
Query: 286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 345
+ A N+ +T+ +A+ G I K G
Sbjct: 239 DGAEP--VNVGCGEDLTIKELAETVRDVVGYEGRIAWDTSKPDGT--------------- 281
Query: 346 EPRAAKDI-----LGWRSTTNLPEDLKERFEEY 373
PR DI LGW+ L E + ++ +
Sbjct: 282 -PRKLLDISRLASLGWKPRVGLREGIAGTYQAW 313
>gi|50954416|ref|YP_061704.1| hypothetical protein Lxx06550 [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50950898|gb|AAT88599.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 302
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 13/194 (6%)
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK------P 193
DP + V+G +FDV + + + D + V Q++FISSA Y+ P
Sbjct: 27 DPESMHAVLGQRSFDVAAEFLAFTPEHIHTDFDLFEGR-VGQYMFISSASSYQTPPSRLP 85
Query: 194 ADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS----FRPQYMIGSGNNKDCEEWF-FD 248
E + + + E + + + RP + W +
Sbjct: 86 VTESTPLRNPFWQYSRDKIACEDLLVQGYRERGFPITIVRPSHTYDRTMIPTSGHWTDLE 145
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
R+ R PV + G G I H D + T + PEA + F++ SD A T D +
Sbjct: 146 RMRRGAPVVVHGDGTGRWTITHSTDFAVAFTGLLGRPEAV-GDTFHITSDEAPTWDQIYC 204
Query: 309 LCAQAAGLPVEIVH 322
A+A G+ E+VH
Sbjct: 205 YLAEALGVEAELVH 218
>gi|398845160|ref|ZP_10602203.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM84]
gi|398253814|gb|EJN38928.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM84]
Length = 310
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 104/260 (40%), Gaps = 34/260 (13%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFN---------EIVS 131
+GG IG +L LL G+ V ++ + G ++ ++ P E +
Sbjct: 9 TGGAGFIGSHLCDALLDKGYAVRVLDDLSTGKRDNLQLGNPRLELIEGDVADAELVERAA 68
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
AG K V A V +V V V + N V + + GV++ LF SSA +Y
Sbjct: 69 AGCKAVV-HLAAVASVQASVEDPV--KTHQSNFIGTLNVCEAMRVHGVRRVLFASSAAVY 125
Query: 192 KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD- 241
E + D K V+K SE + ++ +R Q+ + G +D
Sbjct: 126 GNNGEGQSIAEDTPKAPLTPYAVDKLASEQYLDF--YRRQHDLEPVVFRFFNIFGPRQDP 183
Query: 242 ------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
F +R + P+ + G G Q + +V DL ++ A+E P+ + N+
Sbjct: 184 SSPYSGVISIFSERATQGLPITVFGDGEQTRDFLYVGDLVQVMVQALEQPQVEEGAV-NI 242
Query: 296 VSDRAVTLDGMAKLCAQAAG 315
++A +L+ + K Q G
Sbjct: 243 GLNQATSLNQLLKALEQVVG 262
>gi|163781591|ref|ZP_02176591.1| UDP-glucuronate decarboxylase [Hydrogenivirga sp. 128-5-R1-1]
gi|159882811|gb|EDP76315.1| UDP-glucuronate decarboxylase [Hydrogenivirga sp. 128-5-R1-1]
Length = 314
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDL-SSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
F + + +P+ + G G Q + ++ DL + LA+E E S +FNL + T+
Sbjct: 191 FIYQAITGKPLTVYGDGSQTRSFCYIDDLVEGIYRLAIE--EGLSGEVFNLGNPTEHTIL 248
Query: 305 GMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPE 364
+AKL AG P EIV D D +K + AK ++GW T++ E
Sbjct: 249 DLAKLIIDIAGSPSEIVFTDRPVDDPDRRK----------PDITKAKKVIGWEPETSIEE 298
Query: 365 DLK 367
LK
Sbjct: 299 GLK 301
>gi|423013033|ref|ZP_17003754.1| GDP-L-fucose synthase [Achromobacter xylosoxidans AXX-A]
gi|338784021|gb|EGP48369.1| GDP-L-fucose synthase [Achromobacter xylosoxidans AXX-A]
Length = 317
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 106/263 (40%), Gaps = 32/263 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G L +EL G G+ ++T D + +RF V+ A+
Sbjct: 11 AGHRGMVGAALVRELQGRGYR-QVITRSHSELDLENQNQVHRFFSTTPV--DVVYLAAAK 67
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD 203
VG ++ V D +NL V A ++GV++ LF+ S+ IY P + P + D
Sbjct: 68 VGGILANQNHPV--DFLYRNLMIQCNVIRAAYAAGVRKLLFLGSSCIY-PREAPQPLRED 124
Query: 204 --------------VVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFD 248
+ AG E Y E +++ P + G +N D
Sbjct: 125 ALLTGPLEATNEPYAIAKIAGLKLCEAYQREYGAHFVCAMPTNLYGPHDNYDLHSSHVLP 184
Query: 249 RIVRK---------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
++RK V + GSG +V DL+ + +E P A ++N+ + +
Sbjct: 185 ALIRKFHEGREAGDDSVTLWGSGKPLREFLYVDDLARACVMLMETPTA--EGMYNIGAGQ 242
Query: 300 AVTLDGMAKLCAQAAGLPVEIVH 322
+++ +A++ AQ G IV+
Sbjct: 243 DLSIAELARVVAQVVGYQGNIVY 265
>gi|391229518|ref|ZP_10265724.1| nucleoside-diphosphate-sugar epimerase [Opitutaceae bacterium TAV1]
gi|391219179|gb|EIP97599.1| nucleoside-diphosphate-sugar epimerase [Opitutaceae bacterium TAV1]
Length = 324
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 104/262 (39%), Gaps = 52/262 (19%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENS-------------------DKMKKPPFNR 125
GG IG +LA LL G +VT + + + + + ++ PP
Sbjct: 8 GGEGFIGRHLAARLLNDGQQVTSVDLAESDRREGGGRRFVTADVRATLTFETLESPPLVL 67
Query: 126 FNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
FN ++A +T G P D NL+ V D+A+ +GV+ +F
Sbjct: 68 FN--LAAVHRTP-GHPNR--------------DYFDANLNGAENVCDFARKTGVRTIVFT 110
Query: 186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF-SNWAS----------FRPQYMI 234
SS Y A E E + P+ + + K ++E+ W + RP +
Sbjct: 111 SSIAPYG-ASEELKTEETLPTPNTAY-GISKLVAEHIHRRWQAEKPSERRLVIVRPGVVF 168
Query: 235 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
G G + ++ +R++ PG +V+D++++L E PE+ ++N
Sbjct: 169 GHGEKGNVTRLYW--ALRRKRFAYPGRTDTIKASIYVKDVAALLAEMSERPESGVF-VYN 225
Query: 295 LVSDRAVTLDGMAKLCAQAAGL 316
L + A T+ + + + G+
Sbjct: 226 LTYEPAPTIKDICTVMSTVTGV 247
>gi|300858637|ref|YP_003783620.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis FRC41]
gi|375288816|ref|YP_005123357.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 3/99-5]
gi|379715516|ref|YP_005303853.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 316]
gi|384504820|ref|YP_005681490.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 1002]
gi|384506914|ref|YP_005683583.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis C231]
gi|384511093|ref|YP_005690671.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis PAT10]
gi|387136743|ref|YP_005692723.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis
42/02-A]
gi|387138815|ref|YP_005694794.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis CIP
52.97]
gi|387140807|ref|YP_005696785.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 1/06-A]
gi|389850567|ref|YP_006352802.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 258]
gi|392400750|ref|YP_006437350.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis Cp162]
gi|300686091|gb|ADK29013.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis FRC41]
gi|302206346|gb|ADL10688.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis C231]
gi|302330903|gb|ADL21097.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 1002]
gi|341825032|gb|AEK92553.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis PAT10]
gi|348607188|gb|AEP70461.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis
42/02-A]
gi|349735293|gb|AEQ06771.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis CIP
52.97]
gi|355392598|gb|AER69263.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 1/06-A]
gi|371576105|gb|AEX39708.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 3/99-5]
gi|377654222|gb|AFB72571.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 316]
gi|388247873|gb|AFK16864.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 258]
gi|390531828|gb|AFM07557.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis Cp162]
Length = 327
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 129/338 (38%), Gaps = 66/338 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G A LL GHEVTI+ D S K E V AG + GD +
Sbjct: 6 TGGAGYVGSVCAAVLLEQGHEVTIV---DNFSTGNK--------EAVPAGATLIEGDIRD 54
Query: 144 -VGNVVGGVTFDVVLDNNGKNL---DAVRPVADWA-------------KSSGVKQFLFIS 186
G V+ ++D VL ++L +P W +++ V +F S
Sbjct: 55 KAGEVLASDSYDAVLHFAARSLVGESVEKPSEYWQHNFVTTLALLDAMRANKVTNLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIGS-- 236
+A Y P E +P + + I +++A S R + G+
Sbjct: 115 TAATYGEPASVPITEDFPTQPTNPYGATKLAIDHAITSYAQAYGLSATSLRYFNVAGAYG 174
Query: 237 --GNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVE 283
G N++ E I++ + + I G G + H+RDL+ LA+E
Sbjct: 175 SIGENREVETHLIPLILQVALGHRDKILIFGDDWPTEDGTAVRDYIHIRDLADAHVLAME 234
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG--LPVEIVHYDPKAAGIDAKKAFPFRNM 341
+ + IFNL S ++ + K C G +P E+ P+ AG A
Sbjct: 235 SNKPGIHRIFNLGSGEGFSVKQVIKACRDVTGHPIPAEVA---PRRAGDPAV-------- 283
Query: 342 HFYAEPRAAKDILGWRST-TNLPEDLKERFEEYVKIGR 378
A A+ LGW T T+L +++ + K+G
Sbjct: 284 -LIASSAKAQSELGWNPTRTDLSTIVEDAWSFTSKLGE 320
>gi|402493409|ref|ZP_10840162.1| UDP-N-acetylglucosamine 4-epimerase [Aquimarina agarilytica ZC1]
Length = 332
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 36/223 (16%)
Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYM 233
A+ + VK+F++ +S+ Y + P VE + P + + + KY++E ++N +F+ Y
Sbjct: 118 ARDNNVKRFIYAASSSTYGDSISMPKVEDKIGNPLSPYA-ITKYVNELYAN--NFKKTYN 174
Query: 234 IGS---------GNNKD--------CEEWFFDRIVRKRPVPIPGSG---MQFTNIAHVRD 273
+ + G +D ++ + + PV I G G FT I +V
Sbjct: 175 LDTIGLRYFNVFGRKQDPNGAYAAVIPKFVMQLMKHESPV-INGDGSYSRDFTYIDNVIQ 233
Query: 274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 333
++ ML +A +N EA + N++N TL+ + L + + YDPK AG++ K
Sbjct: 234 MN-MLAMASDNSEALN-NVYNTAFGERTTLNELTSLLKENLSM------YDPKIAGVEIK 285
Query: 334 KAFPFRNM---HFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 373
P R H A AK +L + ++ LKE + Y
Sbjct: 286 FG-PERRGDVPHSLASVDKAKSLLNYDPKFDIKSGLKEAVDWY 327
>gi|386740549|ref|YP_006213729.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 31]
gi|384477243|gb|AFH91039.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 31]
Length = 327
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 129/338 (38%), Gaps = 66/338 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G A LL GHEVTI+ D S K E V AG + GD +
Sbjct: 6 TGGAGYVGSVCAAVLLEQGHEVTIV---DNFSTGNK--------EAVPAGATLIEGDIRD 54
Query: 144 -VGNVVGGVTFDVVLDNNGKNL---DAVRPVADWA-------------KSSGVKQFLFIS 186
G V+ ++D VL ++L +P W +++ V +F S
Sbjct: 55 KAGEVLASDSYDAVLHFAARSLVGESVEKPSEYWQHNFVTTLALLDAMRANKVTNLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIGS-- 236
+A Y P E +P + + I +++A S R + G+
Sbjct: 115 TAATYGEPASVPITEDFPTQPTNPYGATKLAIDHAITSYAQAYGLSATSLRYFNVAGAYG 174
Query: 237 --GNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVE 283
G N++ E I++ + + I G G + H+RDL+ LA+E
Sbjct: 175 SIGENREVETHLIPLILQVALGHRDKILIFGDDWPTKDGTAVRDYIHIRDLADAHVLAME 234
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG--LPVEIVHYDPKAAGIDAKKAFPFRNM 341
+ + IFNL S ++ + K C G +P E+ P+ AG A
Sbjct: 235 SNKPGIHRIFNLGSGEGFSVKQVIKACRDVTGHPIPAEVA---PRRAGDPAV-------- 283
Query: 342 HFYAEPRAAKDILGWRST-TNLPEDLKERFEEYVKIGR 378
A A+ LGW T T+L +++ + K+G
Sbjct: 284 -LIASSAKAQSELGWNPTRTDLSTIVEDAWSFTSKLGE 320
>gi|383320425|ref|YP_005381266.1| Nucleoside-diphosphate-sugar epimerase [Methanocella conradii
HZ254]
gi|379321795|gb|AFD00748.1| Nucleoside-diphosphate-sugar epimerase [Methanocella conradii
HZ254]
Length = 313
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 127/317 (40%), Gaps = 43/317 (13%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF--NEIVSA 132
+KVL+ +GG +G YL +EL+ G VTI+ + +S PP F +I A
Sbjct: 4 RKVLL----TGGLGQVGSYLCEELVRRGCVVTILD--NLSSGANAYPPEANFVKGDIRDA 57
Query: 133 GGKTVWGDPAEVGNVVGGVTF------DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
G + A+ F D V D + N+ + + ++ + VK+F++ S
Sbjct: 58 GLVNILVSRADAVIHCAAQIFVARSMEDPVFDAD-NNVMGTLNLLNASRKAEVKRFVYFS 116
Query: 187 SAGIYK-----PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA----SFRPQYMIGSG 237
SA Y P DE H + + A + EKY + S RP + I S
Sbjct: 117 SAATYGNPVRLPLDE-SHPQEPLSPYGASKLSGEKYALMFHRAYGLPVTSIRP-FNIYSP 174
Query: 238 NNKDCEEW------FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ F DR+ + G G + V D+ M+ L +E EA
Sbjct: 175 RQDPSNPYSGVISKFIDRVSHGMSPIVYGDGSATRDFVSVHDVVDMVMLMLEKEEAV-GR 233
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAK 351
FN + +A +D +A++ G +E + P+ G D K + YA+ AK
Sbjct: 234 AFNCGTGKATRIDELARMVIDLYGKGLE-PEFQPERPG-DIKDS--------YADISLAK 283
Query: 352 DILGWRSTTNLPEDLKE 368
LG+ L E LK+
Sbjct: 284 KALGYTPKVGLKEGLKD 300
>gi|398346905|ref|ZP_10531608.1| UDP-glucose 4-epimerase [Leptospira broomii str. 5399]
Length = 308
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 88/175 (50%), Gaps = 22/175 (12%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSA---GIYKPADEPPHVEGDVVKP--DAGHVQVE-- 215
N++ + +A++A +++F++ISS G P DEP VE D KP D G ++E
Sbjct: 82 NVETTKLLAEFAIRYKIRKFIYISSVKALGERSPTDEPLTVE-DEPKPEDDYGKSKLEAE 140
Query: 216 ----KYISENFSNWASFRPQYMIGSG--NNKDCEEWFFDRIVRKRPVPIPGSGMQFT-NI 268
S F + RP ++GSG N + W +VRK +P+P +G++ ++
Sbjct: 141 DTLRSICSHEFLQYTILRPPLIVGSGAKGNLNRLTW----LVRK-GIPLPFAGIKNKRSL 195
Query: 269 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY 323
VR+ + ++ + A++ N LVSD +++ + + ++A G+ + ++
Sbjct: 196 VGVRNFCDAILFSLIH--ASTDNKIFLVSDSSLSTPELFRYFSEALGVRDSLFYF 248
>gi|390439716|ref|ZP_10228094.1| UDP-glucose 4-epimerase [Microcystis sp. T1-4]
gi|389836873|emb|CCI32218.1| UDP-glucose 4-epimerase [Microcystis sp. T1-4]
Length = 326
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 17/170 (10%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYI 218
N + + + +GVK F+FISS G + E PD+ + +Q E+ +
Sbjct: 93 NTQGTANLVEQSIQAGVKHFIFISSIGAMTTQSDRILTENSPCHPDSPYGRSKLQAEQAL 152
Query: 219 ----SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR--KRPVPIP-GSGMQFTNIAHV 271
++ W RP + G GN + DR+++ KR +P+P G+ + V
Sbjct: 153 INLAKDSNMTWTILRPTLVYGPGNPGN-----IDRLMKLIKRGLPLPFGAVKNRRSFVFV 207
Query: 272 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
+L + + +++P AA+ IF + ++AV+ + +L AQ P ++
Sbjct: 208 GNLVAAIITCLDHPNAANQ-IFLISDNQAVSTPQLIRLIAQQIQQPCRLL 256
>gi|383452490|ref|YP_005366479.1| NAD-dependent epimerase/dehydratase [Corallococcus coralloides DSM
2259]
gi|380727508|gb|AFE03510.1| NAD-dependent epimerase/dehydratase [Corallococcus coralloides DSM
2259]
Length = 389
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 109/275 (39%), Gaps = 35/275 (12%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP--A 142
GG +G L + GH +T+ G N F ++ G DP
Sbjct: 53 GGTRFLGPALVQVAQARGHTLTLFNRGKSNP--------GLFPDVEKLQGDR---DPNKG 101
Query: 143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
E + G +D V+D +G V+ A+ + V Q++FISS +YK + E
Sbjct: 102 EGLKALAGRKWDAVIDTSGYVPRVVKASAELL-APNVGQYVFISSISVYKEMTKQNLNES 160
Query: 203 DVVK--PDAGHVQVE-------KYISENFSNWA------SFRPQYMIGSGNNKDCEEWFF 247
D V PD +V K + E + A + RP ++G + D ++
Sbjct: 161 DAVGTLPDETTEEVGETSYGPLKALCEKAAETALPGRTLNIRPGLIVGPDDGSDRFTYWP 220
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD-RAVTLDGM 306
R+ + V PG G + RDL++ + + N E ++ IFN+ + + + GM
Sbjct: 221 LRVAKGGEVLAPGDGEDPVQVIDARDLAAFI---IRNVERRTTGIFNVTGPVQPMKMKGM 277
Query: 307 AKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
+ +A G D A +D +K F +M
Sbjct: 278 LETLREATGSDARFTWVD--TAFLDQQKVTAFGDM 310
>gi|453073920|ref|ZP_21976718.1| UDP-glucose 4-epimerase [Rhodococcus triatomae BKS 15-14]
gi|452765406|gb|EME23663.1| UDP-glucose 4-epimerase [Rhodococcus triatomae BKS 15-14]
Length = 328
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 115/286 (40%), Gaps = 52/286 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G A LL GH+V + V D ++ P +G + V GD A+
Sbjct: 6 TGGAGYVGSVCATVLLERGHDVVV--VDDLSTGNAGAVP---------SGAEFVEGDVAD 54
Query: 144 VG-NVVGGVTFDVVLDNNGKNL---DAVRPVADWA-------------KSSGVKQFLFIS 186
V V+G FD VL ++L +P W +++G + +F S
Sbjct: 55 VAARVLGDARFDGVLHFAAQSLVGESVEQPAKYWQGNVVTTLTLLEAMRAAGTPKLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISE--NFSNWASFRPQYM------I 234
+A Y + P E D +P A + ++ I+ N A+ +Y +
Sbjct: 115 TAATYGEPERTPITEDDPTRPTNPYGATKLAIDHAITSYANAYGLAATSLRYFNVAGAHL 174
Query: 235 GSGNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVE 283
G+G N+ E +++ + + + G+ G + HV DL+ LA++
Sbjct: 175 GAGENRVVETHLIPLVLQVALGQRDKISVFGTDWPTPDGTAVRDYIHVLDLADAHLLALD 234
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
+ + ++NL S ++ + C + GLP+ V P+ AG
Sbjct: 235 HATPGTHRVYNLGSGAGFSVREVISSCRRVTGLPIA-VEDAPRRAG 279
>gi|228928274|ref|ZP_04091315.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228946838|ref|ZP_04109140.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228812825|gb|EEM59144.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228831321|gb|EEM76917.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
Length = 326
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 95/248 (38%), Gaps = 45/248 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVT-------IMTVGDENSDKMKKPPFNRFNEIV------ 130
+GG +G LA L G+EVT I V ++N K P ++
Sbjct: 4 TGGTGFLGQKLAFRLKNMGYEVTATGRNKTIGKVLEQNGIKFVHCPLEDRERVLQVCKDK 63
Query: 131 -----SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
S + WG + N N+ + + + ++ G+K+ + +
Sbjct: 64 DYIFHSGALSSPWGKYEDFYNA---------------NVLGTKHIIEGSQKYGIKRLIHV 108
Query: 186 SSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISENFSNWA--------SFRPQYMIG 235
S+ IY DE +V + PD H KY++E + A + RP+ + G
Sbjct: 109 STPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAEQAIDQAFAHGLPVITIRPRALFG 168
Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
G+N ++ K +P G+ +I +V ++ L L + +P+ +N+
Sbjct: 169 PGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVENVVDALLLCMHSPKHTLGQKYNI 226
Query: 296 VSDRAVTL 303
+D + L
Sbjct: 227 TNDERINL 234
>gi|425901837|ref|ZP_18878428.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|397892875|gb|EJL09351.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
Length = 309
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 108/275 (39%), Gaps = 37/275 (13%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF-NRFNEIVSAGGKTVWGDPA 142
+GG IG +L LL G+ V I+ D ++ K P N E++ D A
Sbjct: 9 TGGAGFIGSHLTDALLAKGYSVRILD--DLSTGKPGNLPLDNPRVELIEGD----VADAA 62
Query: 143 EVGNVVGGV--------------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA 188
V + G + D + + N V + + +GVK+ LF SSA
Sbjct: 63 LVARAMSGCRAVAHLAAVASVQASVDDPVRTHQSNFIGTLNVCEAMRQAGVKRVLFASSA 122
Query: 189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW---------ASFRPQYMIG---- 235
+Y E ++ D K +K SE + ++ A FR + G
Sbjct: 123 AVYGNNGEGESIDEDTPKAPLTPYASDKLASEYYFDFYRRQHGLEPAIFRFFNIFGPRQD 182
Query: 236 -SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
S F +R + P+ + G G Q + +V DL +L ++E P+ + N
Sbjct: 183 PSSPYSGVISIFCERAQKGLPITVFGDGEQTRDFMYVEDLVDVLVQSLETPQLEVGAV-N 241
Query: 295 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
+ ++A TL + ++ + G P+ + Y P +G
Sbjct: 242 VGLNQATTLKQLLEVLGEVVG-PLPPISYGPARSG 275
>gi|398789108|ref|ZP_10551080.1| NAD-dependent epimerase/dehydratase [Streptomyces auratus AGR0001]
gi|396991749|gb|EJJ02883.1| NAD-dependent epimerase/dehydratase [Streptomyces auratus AGR0001]
Length = 295
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 98/255 (38%), Gaps = 38/255 (14%)
Query: 142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEP--- 197
A+VG ++ T V + NL V A +GV++ LF+ S+ IY K A +P
Sbjct: 49 AKVGGIMANSTQPVQFLED--NLSIQLSVIAGAHHAGVRRLLFLGSSCIYPKHAAQPITE 106
Query: 198 ---------PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE----- 243
P E + AG VQ+ Y + +++ S P + G G+N D E
Sbjct: 107 DALLSGPLEPTNEAYAIAKIAGLVQIRSYRRQYGASFISAMPTNLYGPGDNFDLETSHVL 166
Query: 244 ----EWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
F + + RP + + G+G HV DL++ + + + + N+
Sbjct: 167 PALIRRFHEAKQQGRPELTLWGTGTPLREFLHVDDLAAACEVLLRRYD--GDDTVNVGCG 224
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS 358
+T+ +A A A G I +DP +K M LGW
Sbjct: 225 EDLTIAELASCVAAAVGYEGRIA-FDPSRPDGTPRKLLDISRMR----------ALGWAP 273
Query: 359 TTNLPEDLKERFEEY 373
T L E + +E +
Sbjct: 274 TIPLAEGIARTYEAW 288
>gi|302559535|ref|ZP_07311877.1| NAD-dependent epimerase/dehydratase [Streptomyces griseoflavus
Tu4000]
gi|302477153|gb|EFL40246.1| NAD-dependent epimerase/dehydratase [Streptomyces griseoflavus
Tu4000]
Length = 336
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 113/272 (41%), Gaps = 46/272 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---D 140
+GG IG ++A+ELL GH V ++ D + P AG + G D
Sbjct: 3 TGGAGFIGSHVARELLDRGHRVIVLD--DLSGGTAANVP---------AGAEFRHGSVCD 51
Query: 141 PAEVGNVVGGVTFDVVLD----------------NNGKNLDAVRPVADWAKSSG-VKQFL 183
P V V D V N N+ + + A ++G VK F+
Sbjct: 52 PDVVDAVFAAHRVDYVFHLAAYAAEGLSHFIKRFNYMNNVVGSVNLINAAVNAGTVKCFV 111
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGH------VQVEKYISENFSN--WASFRPQYMIG 235
F SS +Y A++ P E V P+ + V+ E ++ + FRP + G
Sbjct: 112 FTSSIAVYG-ANQLPMSEDLVPAPEDPYGIAKFSVEQELRVTHEMFGLPYVIFRPHNVYG 170
Query: 236 SGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
N ++ F ++ +R + G G Q ++++D++ + +VE P AA +
Sbjct: 171 EYQNIGDRYRNVIGIFMNQALRGEEFTVFGDGEQTRAFSYIKDVAPAIARSVELP-AAYN 229
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
+FN+ D+ +++ +A +A G+ + + H
Sbjct: 230 EVFNVGGDQVYSVNRIAAAVCEAMGVELRVNH 261
>gi|196032305|ref|ZP_03099719.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus W]
gi|195995056|gb|EDX59010.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus W]
Length = 328
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 95/248 (38%), Gaps = 45/248 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVT-------IMTVGDENSDKMKKPPFNRFNEIV------ 130
+GG +G LA L G+EVT I V ++N K P ++
Sbjct: 6 TGGTGFLGQKLAFRLKNMGYEVTATGRNKTIGKVLEQNGIKFVHCPLEDRERVLQVCKDK 65
Query: 131 -----SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
S + WG + N N+ + + + ++ G+K+ + +
Sbjct: 66 DYIFHSGALSSPWGKYEDFYNA---------------NVLGTKHIIEGSQKYGIKRLIHV 110
Query: 186 SSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISENFSNWA--------SFRPQYMIG 235
S+ IY DE +V + PD H KY++E + A + RP+ + G
Sbjct: 111 STPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAEQAIDQAFAHGLPVITIRPRALFG 170
Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
G+N ++ K +P G+ +I +V ++ L L + +P+ +N+
Sbjct: 171 PGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVENVVDALLLCMHSPKHTLGQKYNI 228
Query: 296 VSDRAVTL 303
+D + L
Sbjct: 229 TNDERINL 236
>gi|186682745|ref|YP_001865941.1| NAD-dependent epimerase/dehydratase [Nostoc punctiforme PCC 73102]
gi|186465197|gb|ACC80998.1| NAD-dependent epimerase/dehydratase [Nostoc punctiforme PCC 73102]
Length = 315
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 162 KNLDAVRPVADWAK-SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 220
+N++A + + + AK + +K+ +F SS+ +Y A+ P EG +P + + + K +E
Sbjct: 101 RNINATQVLLEAAKDAKHLKRLVFASSSSVYGDAETLPTHEGICPEPVSPY-GITKLAAE 159
Query: 221 NFSN---------WASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAH 270
+ S R + G D FF I++ +PI G G Q
Sbjct: 160 TLCRLYHKNFGVPYVSLRYFTVYGPKQRPDMAFHKFFKSILQDEAIPIYGDGQQTREFTF 219
Query: 271 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 330
V D+ + A P+A IFN+ V L + + G P++ H + KA G
Sbjct: 220 VGDIVAANLAAASTPQAV-GEIFNIGGGSRVVLAEVLDTIEEIVGKPIKRNHIE-KAMG- 276
Query: 331 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 370
DA+ H A+ A+ ILG++ +L + L + +
Sbjct: 277 DAR--------HTAADVSKAQKILGYQPQVSLRDGLTQEW 308
>gi|390938917|ref|YP_006402655.1| NAD-dependent epimerase/dehydratase [Desulfurococcus fermentans DSM
16532]
gi|390192024|gb|AFL67080.1| NAD-dependent epimerase/dehydratase [Desulfurococcus fermentans DSM
16532]
Length = 307
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 119/321 (37%), Gaps = 64/321 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG +L +L+ G++V ++ G PF I G + +
Sbjct: 6 TGGGGFIGRFLVSDLVKKGYDVIVVDRGPS--------PFVEHQRIKYYVGDVT--NVIQ 55
Query: 144 VGNVVGGVTFDVV---------------LDNNGKNLDAVRPVADWAKSSGVKQFLFISSA 188
+ N++ D+V L N++A + + + + + G+K+F+F+SSA
Sbjct: 56 MNNIMAKHKPDIVIHLAALLADTCEIEPLQATKVNIEATQNLIELSITHGIKRFVFMSSA 115
Query: 189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW---------ASFRPQYMIGSGNN 239
+Y P P E D KP + V KY E +W + RP + G G
Sbjct: 116 SVYHPDTPEPVREEDAGKP-VSYYGVTKYAGELIGSWYYRKGLIDFRALRPTVVFGPGRF 174
Query: 240 K----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA--ASSNIF 293
+ + +R + V + + N +VRD S L L E + + N
Sbjct: 175 RGPSAEYSSMIIERALNNEKVIVKNPNDR-VNYIYVRDAVSALILLAEAEKVRYRAYNAA 233
Query: 294 NLVSDRAVTLDGMAKL---CAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAA 350
VS R + M K Q P E V Y AA ID K
Sbjct: 234 GFVS-RVIEFVEMVKKYISTLQYEVQPHEAVRY---AAVIDDSK---------------I 274
Query: 351 KDILGWRSTTNLPEDLKERFE 371
++ LGWR + +++ E
Sbjct: 275 REELGWRPQYTYEKAIEDYIE 295
>gi|336401994|ref|ZP_08582739.1| hypothetical protein HMPREF0127_00052 [Bacteroides sp. 1_1_30]
gi|335948716|gb|EGN10418.1| hypothetical protein HMPREF0127_00052 [Bacteroides sp. 1_1_30]
Length = 338
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 19/161 (11%)
Query: 179 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 227
+Q++FISSA Y KP + P+ + K +A V + Y + F
Sbjct: 88 TRQYIFISSASAYQKPLADYRITESTPLVNPYWQYSRNKIEAEEVLMAAYRTNGFPV-TI 146
Query: 228 FRPQYMIGSGN-----NKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
RP + + D W RI+ +PV IPG G + H +D +
Sbjct: 147 VRPSHTYNGTKPPVSVHGDKGNWQILKRILEGKPVIIPGDGSSLWTLTHSKDFAKGYVGL 206
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
+ NP A N F++ +D ++T + + + A A G P+ +H
Sbjct: 207 MANPHAI-GNAFHITTDESMTWNQIYQTIADALGKPLNALH 246
>gi|298481169|ref|ZP_06999363.1| mRNA-binding protein [Bacteroides sp. D22]
gi|298272743|gb|EFI14310.1| mRNA-binding protein [Bacteroides sp. D22]
Length = 338
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 19/161 (11%)
Query: 179 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 227
+Q++FISSA Y KP + P+ + K +A V + Y + F
Sbjct: 88 TRQYIFISSASAYQKPLADYRITESTPLVNPYWQYSRNKIEAEEVLMAAYRTNGFPV-TI 146
Query: 228 FRPQYMIGSGN-----NKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
RP + + D W RI+ +PV IPG G + H +D +
Sbjct: 147 VRPSHTYNGTKPPVSVHGDKGNWQILKRILEGKPVIIPGDGSSLWTLTHSKDFAKGYVGL 206
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
+ NP A N F++ +D ++T + + + A A G P+ +H
Sbjct: 207 MANPHAI-GNAFHITTDESMTWNQIYQTIADALGKPLNALH 246
>gi|423213757|ref|ZP_17200286.1| hypothetical protein HMPREF1074_01818 [Bacteroides xylanisolvens
CL03T12C04]
gi|295084039|emb|CBK65562.1| Nucleoside-diphosphate-sugar epimerases [Bacteroides xylanisolvens
XB1A]
gi|392693414|gb|EIY86646.1| hypothetical protein HMPREF1074_01818 [Bacteroides xylanisolvens
CL03T12C04]
Length = 338
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 19/161 (11%)
Query: 179 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 227
+Q++FISSA Y KP + P+ + K +A V + Y + F
Sbjct: 88 TRQYIFISSASAYQKPLADYRITESTPLVNPYWQYSRNKIEAEEVLMAAYRTNGFPV-TI 146
Query: 228 FRPQYMIGSGN-----NKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
RP + + D W RI+ +PV IPG G + H +D +
Sbjct: 147 VRPSHTYNGTKPPVSVHGDKGNWQILKRILEGKPVIIPGDGSSLWTLTHSKDFAKGYVGL 206
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
+ NP A N F++ +D ++T + + + A A G P+ +H
Sbjct: 207 MANPHAI-GNAFHITTDESMTWNQIYQTIADALGKPLNALH 246
>gi|262406510|ref|ZP_06083059.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646100|ref|ZP_06723763.1| NAD dependent epimerase/dehydratase family protein [Bacteroides
ovatus SD CC 2a]
gi|294808306|ref|ZP_06767064.1| NAD dependent epimerase/dehydratase family protein [Bacteroides
xylanisolvens SD CC 1b]
gi|345510060|ref|ZP_08789638.1| hypothetical protein BSAG_02916 [Bacteroides sp. D1]
gi|229445414|gb|EEO51205.1| hypothetical protein BSAG_02916 [Bacteroides sp. D1]
gi|262355213|gb|EEZ04304.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638544|gb|EFF56899.1| NAD dependent epimerase/dehydratase family protein [Bacteroides
ovatus SD CC 2a]
gi|294444525|gb|EFG13234.1| NAD dependent epimerase/dehydratase family protein [Bacteroides
xylanisolvens SD CC 1b]
Length = 338
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 19/161 (11%)
Query: 179 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 227
+Q++FISSA Y KP + P+ + K +A V + Y + F
Sbjct: 88 TRQYIFISSASAYQKPLADYHITESTPLVNPYWQYSRNKIEAEEVLMAAYRTNGFPV-TI 146
Query: 228 FRPQYMIGSGN-----NKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
RP + + D W RI+ +PV IPG G + H +D +
Sbjct: 147 VRPSHTYNGTKPPVSVHGDKGNWQILKRILEGKPVIIPGDGSSLWTLTHSKDFAKGYVGL 206
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
+ NP A N F++ +D ++T + + + A A G P+ +H
Sbjct: 207 MANPHAI-GNAFHITTDESMTWNQIYQTIADALGKPLNALH 246
>gi|146308888|ref|YP_001189353.1| NAD-dependent epimerase/dehydratase [Pseudomonas mendocina ymp]
gi|145577089|gb|ABP86621.1| NAD-dependent epimerase/dehydratase [Pseudomonas mendocina ymp]
Length = 306
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 121/316 (38%), Gaps = 53/316 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
+GG IG +L LL +GH V ++ ++G ++ + P RF E A D
Sbjct: 7 TGGAGFIGSHLVDALLAAGHGVCVLDNLSMGKRSNLPLDNPRL-RFIEGDVA-------D 58
Query: 141 PAEVGNVVGGV--------------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
A+V + G + D + + N V + + GV++ L+ S
Sbjct: 59 AAQVEQAMAGCDAVAHLAAVASVQASVDDPVATHQSNFIGTLNVCEAMRRHGVRRVLYAS 118
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW---------ASFRPQYMIGSG 237
SA +Y E ++ D K V+K SE + ++ A FR + GS
Sbjct: 119 SAAVYGNNGEGLAIDEDTAKAPLTPYAVDKLASEQYLDFYRRQHGLEPAVFRFFNIFGSR 178
Query: 238 NN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA-----VENPEA 287
+ F R + +P+ + G G Q + +V DL +L VE P
Sbjct: 179 QDPSSPYSGVISIFTQRAQQGQPISVFGDGEQTRDFFYVGDLIELLLQGLFGEVVEQP-- 236
Query: 288 ASSNIFNLVSDRAVTLDG-MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAE 346
N+ ++AV+L +A++ A GLP + H +A I +A R Y
Sbjct: 237 -----VNVGWNQAVSLKQLLAEIGALCGGLP-PVTHLPARAGDIRHSRANNARLQAHYRL 290
Query: 347 PRAAKDILGWRSTTNL 362
P+ G R L
Sbjct: 291 PQQTPLREGLRQLLGL 306
>gi|13475790|ref|NP_107357.1| hypothetical protein mll6957 [Mesorhizobium loti MAFF303099]
gi|14026546|dbj|BAB53143.1| mll6957 [Mesorhizobium loti MAFF303099]
Length = 318
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 101/257 (39%), Gaps = 43/257 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
+V+I+ GG +G YL L+ +G+EV ++ G R ++A K
Sbjct: 3 RVVII----GGSGHVGTYLVPRLVEAGYEVVNVSRGQ------------RAAYTLNAAWK 46
Query: 136 TVWGDPAEV-----------GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
+V +P + G V + D+V+D LD+ + + A V+ FL
Sbjct: 47 SV--EPVVIDRDTEEKAGTFGEKVRALKADIVVDMISFTLDSTKQIVG-ALRGEVQHFLH 103
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS--------FRPQYMIGS 236
+ +Y P E P + + I N A FRP +++G
Sbjct: 104 CGTIWVYGHNTAIPATEDQPKNPFGSYGTQKAEIESWLLNEARRNGFPATVFRPGHIVGP 163
Query: 237 GNNKDCEEWFFD-----RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
G FD +I R P+ +P G + + H D++ M+ A+ + A
Sbjct: 164 GWEPLNPAGHFDVGVFSQIARGEPLVLPNLGNETVHHVHADDVAQMVMRAIVSWSNAVGE 223
Query: 292 IFNLVSDRAVTLDGMAK 308
FN VS +A+ L G A+
Sbjct: 224 AFNTVSPQAINLRGYAE 240
>gi|356556680|ref|XP_003546651.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic-like
[Glycine max]
Length = 349
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 89/213 (41%), Gaps = 47/213 (22%)
Query: 32 SFSSYSHLSSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKK---------------- 75
+ SS+S LS S PS F C +SR++ ++ T+ SA+ K
Sbjct: 18 TLSSHSQLSP--SPQPSQFKPCTVASRQNLCTSNTLSVSASRKNSTSPIFLATASGKSEP 75
Query: 76 -----KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV 130
VLI + G IG+ LAKE L +G V I + DE + N V
Sbjct: 76 MLPPFNVLITGSTKG----IGYALAKEFLKAGDNVLICSRSDERVKTAVQ------NLRV 125
Query: 131 SAGGKTVWGDPAEVGN---VVGGVTF--------DVVLDNNGKNLDAVRPVADWAKSSGV 179
G + VWG +V N V V+F D+ ++N G N + +P+ + A +
Sbjct: 126 EFGEQHVWGTKCDVKNAEDVKNLVSFAQEKMKYIDIWINNAGSNAYSYKPLVE-ASDEDL 184
Query: 180 KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 212
+ + ++ G+ E ++ V +P GH+
Sbjct: 185 IEVVTTNTLGLMICCREA--IKMMVNQPRGGHI 215
>gi|448471165|ref|ZP_21600769.1| NAD-dependent epimerase/dehydratase [Halorubrum aidingense JCM
13560]
gi|445820840|gb|EMA70642.1| NAD-dependent epimerase/dehydratase [Halorubrum aidingense JCM
13560]
Length = 319
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 20/170 (11%)
Query: 181 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---- 236
+ + SS IY +E P E D +PD+ + V+K ++++ + Y + +
Sbjct: 123 RVVLASSVAIYGDPEELPVREDDPKRPDSPY-GVDKLAIDHYARL--YHEHYGLDTVALR 179
Query: 237 -----------GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
G+ F D+ RP+ + G G Q + HV D+ A E
Sbjct: 180 YFNVYGPRQSGGSYSGVIGTFVDQARSGRPITVHGDGQQTRDFVHVADVVRANLAAAETD 239
Query: 286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
A FN+ + +VT+ +A+ AG EIVH DP+ +D +A
Sbjct: 240 --AVGRGFNIGTGESVTIRELAEEIRSIAGADSEIVHTDPRDGDVDRSRA 287
>gi|421503857|ref|ZP_15950802.1| NAD-dependent epimerase/dehydratase [Pseudomonas mendocina DLHK]
gi|400345361|gb|EJO93726.1| NAD-dependent epimerase/dehydratase [Pseudomonas mendocina DLHK]
Length = 306
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 119/311 (38%), Gaps = 43/311 (13%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFN---------EIVS 131
+GG IG +L LL +GH V ++ ++G ++ + P E
Sbjct: 7 TGGAGFIGSHLVDALLAAGHGVCVLDNLSMGKRSNLPLDNPRLRFIEGDVADAAQIEQAM 66
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
AG TV A V +V V D + + N V + + GV++ L+ SSA IY
Sbjct: 67 AGCDTV-AHLAAVASVQASV--DDPVATHQSNFIGTLNVCEAMRRHGVRRVLYASSAAIY 123
Query: 192 KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW---------ASFRPQYMIG-----SG 237
E ++ D K V+K SE + ++ A FR + G S
Sbjct: 124 GNNGEGLAIDEDTAKAPLTPYAVDKLASEQYLDFYRRQHGLEPAVFRFFNIFGPRQDPSS 183
Query: 238 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA-----VENPEAASSNI 292
F R + +P+ + G G Q + +V DL +L VE P
Sbjct: 184 PYSGVISIFTQRAQQGQPISVFGDGEQTRDFFYVGDLIELLLQGLFGEVVEQP------- 236
Query: 293 FNLVSDRAVTLDG-MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAK 351
N+ ++AV+L +A++ A GLP + H +A I +A R Y P+
Sbjct: 237 VNVGWNQAVSLKQLLAEIGALCGGLP-PVTHLPARAGDIRHSRADNARLQALYRLPQQTP 295
Query: 352 DILGWRSTTNL 362
G R L
Sbjct: 296 LREGLRQLLGL 306
>gi|305680991|ref|ZP_07403798.1| UDP-glucose 4-epimerase [Corynebacterium matruchotii ATCC 14266]
gi|305659196|gb|EFM48696.1| UDP-glucose 4-epimerase [Corynebacterium matruchotii ATCC 14266]
Length = 342
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 126/331 (38%), Gaps = 62/331 (18%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA 132
K K ++ +GG +G A LL GH++TI+ D NR + V A
Sbjct: 8 RKAKTIMKLLVTGGAGYVGSVCATVLLEQGHDITIV-------DNFSTG--NR--DAVPA 56
Query: 133 GGKTVWGDPAEV-GNVVGGVTFDVVLDNNGKNL---DAVRPVADW-------------AK 175
+ GD +V G+V+ G FD V+ ++L RP W +
Sbjct: 57 NATLIEGDIRDVAGDVLAGGNFDGVVHFAARSLVGESMERPEDYWHHNFVTTLTLLDAMR 116
Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------S 227
+ GV +F S+A Y D P E P + + I +++A S
Sbjct: 117 NHGVTNLVFSSTAATYGEPDRVPITEDMPTAPTNPYGASKLAIDYAITSYAHAHGLGATS 176
Query: 228 FRPQYMIGS----GNNKDCEEWFFDRIVR-----KRPVPIPG------SGMQFTNIAHVR 272
R + G+ G N++ E +++ + + I G G + H++
Sbjct: 177 LRYFNVAGAYGSVGENREVETHLIPLVLQVALGHRDEIFIFGDDYPTKDGTCIRDYIHIK 236
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDA 332
DL+ LA+E+ + IFNL S ++ + C + G P+ + D +A
Sbjct: 237 DLADAHVLALESNTPGTHRIFNLGSGDGYSVKEVIDKCREVTGHPIPVTMADRRAGDPAV 296
Query: 333 KKAFPFRNMHFYAEPRAAKDILGWR-STTNL 362
A R AK LGWR S T+L
Sbjct: 297 LIASSAR----------AKAELGWRPSRTDL 317
>gi|423523068|ref|ZP_17499541.1| hypothetical protein IGC_02451 [Bacillus cereus HuA4-10]
gi|401173226|gb|EJQ80439.1| hypothetical protein IGC_02451 [Bacillus cereus HuA4-10]
Length = 341
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 110/272 (40%), Gaps = 45/272 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G K F ++V
Sbjct: 2 KILIL----GGTRFLGRAFVEEALKRGHEVTLFNRG------TNKEIFPEVEQLV----- 46
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + + +DVV+D G + +R V + K + ++ ++FISS +YK
Sbjct: 47 ---GDRNDNVSSLKNRKWDVVIDTCGFSPHHIRNVGEVLKDN-IEHYIFISSISVYKDWI 102
Query: 196 EPPHVEGD-VVKPDAGHVQVEKYISENFSNWASF----------------------RPQY 232
P H++ D +++P+ Q++ + S + + R
Sbjct: 103 -PHHIKEDYILQPEPTSEQIKAVENGEISPYEHYGALKVLCEKEAEKYWPGRVLHVRAGL 161
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G + D ++ R+ + V +PG + + ++D++S EN + + NI
Sbjct: 162 LSGMFDYTDRLPYWIQRVAKGGSVLVPGRKDRPVQLVDIKDVASFGLNMAENNKVGTFNI 221
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
D +T++ + C + E V D
Sbjct: 222 TG--PDDELTMEELLNTCKKVTKSDAEFVWVD 251
>gi|228934482|ref|ZP_04097317.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228825119|gb|EEM70916.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
Length = 326
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 95/248 (38%), Gaps = 45/248 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVT-------IMTVGDENSDKMKKPPFNRFNEIV------ 130
+GG +G LA L G+EVT I V ++N K P ++
Sbjct: 4 TGGTGFLGQKLAFRLKNMGYEVTATGRNKTIGKVLEQNGIKFVHCPLEDRERVLQVCKDK 63
Query: 131 -----SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
S + WG + N N+ + + + ++ G+K+ + +
Sbjct: 64 DYIFHSGALSSPWGKYEDFYNA---------------NVLGTKHIIEGSQKYGIKRLIHV 108
Query: 186 SSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISENFSNWA--------SFRPQYMIG 235
S+ IY DE +V + PD H KY++E + A + RP+ + G
Sbjct: 109 STPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAEQAIDHAFAYGLPVITIRPRALFG 168
Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
G+N ++ K +P G+ +I +V ++ L L + +P+ +N+
Sbjct: 169 PGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVENVVDALLLCMHSPKHTLGQKYNI 226
Query: 296 VSDRAVTL 303
+D + L
Sbjct: 227 TNDERINL 234
>gi|160884450|ref|ZP_02065453.1| hypothetical protein BACOVA_02434 [Bacteroides ovatus ATCC 8483]
gi|237718089|ref|ZP_04548570.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|293369749|ref|ZP_06616325.1| NAD dependent epimerase/dehydratase family protein [Bacteroides
ovatus SD CMC 3f]
gi|299145996|ref|ZP_07039064.1| putative mRNA-binding protein [Bacteroides sp. 3_1_23]
gi|336413558|ref|ZP_08593910.1| hypothetical protein HMPREF1017_01018 [Bacteroides ovatus
3_8_47FAA]
gi|423286499|ref|ZP_17265350.1| hypothetical protein HMPREF1069_00393 [Bacteroides ovatus
CL02T12C04]
gi|156110189|gb|EDO11934.1| NAD dependent epimerase/dehydratase family protein [Bacteroides
ovatus ATCC 8483]
gi|229452510|gb|EEO58301.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292635171|gb|EFF53687.1| NAD dependent epimerase/dehydratase family protein [Bacteroides
ovatus SD CMC 3f]
gi|298516487|gb|EFI40368.1| putative mRNA-binding protein [Bacteroides sp. 3_1_23]
gi|335938602|gb|EGN00492.1| hypothetical protein HMPREF1017_01018 [Bacteroides ovatus
3_8_47FAA]
gi|392675186|gb|EIY68628.1| hypothetical protein HMPREF1069_00393 [Bacteroides ovatus
CL02T12C04]
Length = 335
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 19/161 (11%)
Query: 179 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 227
+Q++FISSA Y KP + P+ + K +A V + Y + F
Sbjct: 88 TRQYIFISSASAYQKPLTDYRITESTPLVNPYWQYSRNKIEAEEVLMSAYRTSGFPV-TI 146
Query: 228 FRPQYMIGSGN-----NKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
RP + + D W RI+ +PV IPG G + H +D +
Sbjct: 147 VRPSHTYNGTKPPVAVHGDKGNWQILKRILDGKPVIIPGDGSSLWTLTHSKDFAKGYVGL 206
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
+ NP A N F++ +D ++T + + + A A G P+ +H
Sbjct: 207 MANPHAI-GNAFHITTDESMTWNQIYQTIADALGKPLNALH 246
>gi|15643275|ref|NP_228319.1| UDP-glucose 4-epimerase [Thermotoga maritima MSB8]
gi|418045318|ref|ZP_12683414.1| UDP-glucose 4-epimerase [Thermotoga maritima MSB8]
gi|4981021|gb|AAD35594.1|AE001727_6 UDP-glucose 4-epimerase, putative [Thermotoga maritima MSB8]
gi|351678400|gb|EHA61547.1| UDP-glucose 4-epimerase [Thermotoga maritima MSB8]
Length = 309
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 88/212 (41%), Gaps = 27/212 (12%)
Query: 178 GVKQFLFISSAG-IY--------KPADEPPH-VEGDVVKPDAGHVQVEKYISENFSNWAS 227
GVK+F+F S+ G IY P E PH + + + + +E + E +
Sbjct: 108 GVKKFIFSSTGGAIYGENVKVFPTPETEIPHPISPYGIAKYSTEMYLEFFAREYGLKYTV 167
Query: 228 FRPQYMIGSGNNKDCEE----WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
R + G + E F +R++R V I G G + +V D+ LA+E
Sbjct: 168 LRYANVYGPRQDPYGEAGVVAIFTERMLRGEEVHIFGDGEYVRDYVYVDDVVRANLLAME 227
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 343
+ +FN+ + R T++ + KL + G E V+ P+ D +K+
Sbjct: 228 K---GDNEVFNIGTGRGTTVNQLFKLLKEITGYDKEPVYKPPRKG--DVRKSI------- 275
Query: 344 YAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
+ AK+ LGW +L E LK E + K
Sbjct: 276 -LDYTKAKEKLGWEPKVSLEEGLKLTVEYFRK 306
>gi|300692902|ref|YP_003753897.1| NADH dehydrogenase (ubiquinone) [Ralstonia solanacearum PSI07]
gi|299079962|emb|CBJ52639.1| putative NADH dehydrogenase (ubiquinone) [Ralstonia solanacearum
PSI07]
gi|344168492|emb|CCA80782.1| putative NADH dehydrogenase (ubiquinone) [blood disease bacterium
R229]
gi|344173236|emb|CCA88380.1| putative NADH dehydrogenase (ubiquinone) [Ralstonia syzygii R24]
Length = 334
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 222
++D R V D + GVK+ L +S+ G PA + K D E+ I+ +
Sbjct: 112 HVDLPRRVVDACRRHGVKRLLHMSALGA-DPAGPSMYQRS---KGDG-----ERVITGSD 162
Query: 223 SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLA 281
+W FRP + G G++ F R+ R P VP+ + +F + +V D+++ A
Sbjct: 163 LDWTVFRPSVVFGPGDHF---LNLFARMQRLAPFVPLACAEARFQPV-YVDDVAAAFAHA 218
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
++NP A +++ LV R TL + + A+G P IV
Sbjct: 219 LDNP-ATFRHVYPLVGPRVYTLAELVRFAGTASGHPRWIV 257
>gi|258653358|ref|YP_003202514.1| NAD-dependent epimerase/dehydratase [Nakamurella multipartita DSM
44233]
gi|258556583|gb|ACV79525.1| NAD-dependent epimerase/dehydratase [Nakamurella multipartita DSM
44233]
Length = 342
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 27/227 (11%)
Query: 86 GHAVIGF---YLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA 142
GH V+G + L G + T++T+ D++ ++ F+ IV + DP
Sbjct: 24 GHDVVGLDTGFFKSGWLYRGTDRTVLTL-DKDVRSVQAEDLVGFDAIVHMA--ELSNDP- 79
Query: 143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
+G+++G VT+DV N +A AKS+GV++F+ +SS +Y AD E
Sbjct: 80 -LGDLLGDVTYDV-------NHKGTLRLATLAKSAGVQRFIHMSSCSVYGVADGVVD-ES 130
Query: 203 DVVKPDAGHVQVEKYISENFSNWA--SFRPQYMIGSGNNKDCEEWFFDRIVRKRP----- 255
+ P + + + + S A +F P +M + FD ++
Sbjct: 131 SPINPQTAYADCKALVERDVSALADDAFSPTFMRNATAFGASPRMRFDIVLNNLAGLAHT 190
Query: 256 ---VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN-IFNLVSD 298
+ + G + + H D+ + A+E P N +FN+ S+
Sbjct: 191 TGRISMTSDGTPWRPLVHAMDIGKAIRCALEAPRDVVHNEVFNVGSN 237
>gi|452750431|ref|ZP_21950180.1| epimerase [Pseudomonas stutzeri NF13]
gi|452005688|gb|EMD97971.1| epimerase [Pseudomonas stutzeri NF13]
Length = 309
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 121/298 (40%), Gaps = 47/298 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG L LL G+ V ++ + ++ K + P N E++ GD A+
Sbjct: 9 TGGAGFIGSNLVDALLARGYAVRVLD--NLSTGKRENLPQNPRVELI-------VGDVAD 59
Query: 144 VGNVVGGV-----------------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
G V V + D + NL + + + +GVK+ LF S
Sbjct: 60 AGCVRRAVQGCRAVVHLAAVASVQASVDDPFATHQSNLIGTLNLCEAMREAGVKRVLFAS 119
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------G 237
SA +Y E ++ + K V+K SE++ ++ +R Q+ + G
Sbjct: 120 SAAVYGNNGEGHAIDEETPKAPLTPYAVDKLASEHYLDF--YRRQHGLEPVIFRFFNIFG 177
Query: 238 NNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
+D F +R + P+ + G G Q + +V DL +L A+E PEA
Sbjct: 178 PRQDPSSPYSGVISIFTERAQKGLPIAVFGDGEQTRDFLYVADLVEVLVQALEAPEAVEG 237
Query: 291 NIFNLVSDRAVTLDG-MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 347
+ N+ ++A +L+ +A + GLP E+ + + I +A R + Y P
Sbjct: 238 AV-NVGLNQATSLNQLLAAIGDVLGGLP-EVSYQAARPGDIRHSRANNARLLQRYRLP 293
>gi|315612318|ref|ZP_07887231.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Streptococcus
sanguinis ATCC 49296]
gi|315315299|gb|EFU63338.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Streptococcus
sanguinis ATCC 49296]
Length = 326
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 137/351 (39%), Gaps = 77/351 (21%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI------MTVGDENS-------DKMKKP 121
KKVL+ +G +G Y+ +EL G++V M ENS D K+
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQQGYQVRAFGRNRKMGQSLENSSVAFFQGDLTKQE 57
Query: 122 PFNR----FNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ + +V AG TVWG D N+ + V D +
Sbjct: 58 DLTQACQGMDMVVHAGALSTVWGAWE---------------DFYQTNVLGTKYVLDACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P D+ E + + + YI ++ F
Sbjct: 103 AGIQRLVYVSSPSIYAAPRDQLAIKESAAPQEN----NLNNYIRSKLASEKLFKDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E+
Sbjct: 159 SIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALES 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAFPFRNMHF 343
P+ AS ++N+ + + + + G P+ P + I F ++ +
Sbjct: 217 PQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPITYRKVPAPLLSVIATSLEFLYKVLKL 275
Query: 344 YAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 375
EP +A +D LG+R ++ E +++ ++Y K
Sbjct: 276 KGEPPLTRYTYYLLRYSQTLDISKAERD-LGYRPQISISEGIEQYVQDYRK 325
>gi|16263983|ref|NP_436775.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti 1021]
gi|384533864|ref|YP_005716528.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti BL225C]
gi|384539615|ref|YP_005723699.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti SM11]
gi|433611593|ref|YP_007195054.1| Nucleoside-diphosphate-sugar epimerase [Sinorhizobium meliloti GR4]
gi|15140107|emb|CAC48635.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti 1021]
gi|333816040|gb|AEG08707.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti BL225C]
gi|336038268|gb|AEH84198.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti SM11]
gi|429556535|gb|AGA11455.1| Nucleoside-diphosphate-sugar epimerase [Sinorhizobium meliloti GR4]
Length = 368
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
G Q + HVRD++ LA+E P AA ++ N+ S A + +A L A+A G+P
Sbjct: 243 GRQKRDFVHVRDVARAFRLALEQPHAA-GHVINIGSGNAYAIADIASLLAEAMGVP---- 297
Query: 322 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
D + I+ ++ RN +A+ A+D+LG+ L + L + F ++V+
Sbjct: 298 --DIEPEIINKARSGDIRNC--FADIAKARDLLGFEPAHRLEDSLAD-FAQWVR 346
>gi|197105552|ref|YP_002130929.1| Nucleoside-diphosphate-sugar epimerase [Phenylobacterium zucineum
HLK1]
gi|196478972|gb|ACG78500.1| Nucleoside-diphosphate-sugar epimerase [Phenylobacterium zucineum
HLK1]
Length = 370
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F RI + + G Q + HVRD++ LA++NP A +FN+ S T++
Sbjct: 229 FASRIANGQAPMVFEDGQQRRDFVHVRDVARAFLLALDNPR-ADGEVFNIGSGVDRTVEE 287
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
+A L A+A G P P+ AG KA H + A+D+LG+ + + E
Sbjct: 288 VALLQAKAMGRP----DLTPEIAG----KARAGDIRHCIPDLAKARDVLGYEAREDFAEG 339
Query: 366 LKERFEEYVKIGRDKKAMQFEIDDKILESLK 396
L E E+V + E +D+++E+ +
Sbjct: 340 LAE-LAEWVA--------RQEAEDRVVEARR 361
>gi|338975459|ref|ZP_08630810.1| GDP-L-fucose synthetase [Bradyrhizobiaceae bacterium SG-6C]
gi|338231203|gb|EGP06342.1| GDP-L-fucose synthetase [Bradyrhizobiaceae bacterium SG-6C]
Length = 316
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 131/328 (39%), Gaps = 56/328 (17%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K+V + +G ++G +A+ L +V I+T D + + NR+ +
Sbjct: 11 KRVFV----AGHRGMVGSAIARRL--GREDVEILTAPRSELDLLDQAAVNRW--FAANRP 62
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KP 193
+ V+ A+VG +V T +NL V A GV++ LF+ S+ IY K
Sbjct: 63 QVVFHAAAKVGGIVANNTLRAEFIY--ENLLIATNVIHAAHEHGVEKLLFLGSSCIYPKL 120
Query: 194 ADEPPHVEG---DVVKPD---------AGHVQVEKYISENFSNWASFRPQYMIGSGNNKD 241
A +P + D ++P AG E Y + S++ S P + G G+N
Sbjct: 121 APQPLREDSLLTDTLEPTNEPYAIAKIAGVKMAEAYRDQYGSDFISIMPTNLYGPGDNYH 180
Query: 242 CE-EWFFDRIVRK---------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
E ++R+ R V + G+G +V D++ ++ +
Sbjct: 181 PEYSHVVAALIRRFHEAKETGAREVVVWGTGTPRREFLYVDDMADASVHLMKT--YSEGG 238
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAK 351
+ N+ + +++ A++ A+ G EIV + G PR
Sbjct: 239 LINVGTGEDISIADFARVVAKTVGYTGEIVFDTSRPDGT----------------PRKLL 282
Query: 352 DI-----LGWRSTTNLPEDLKERFEEYV 374
D+ GWR+TT+L + +K ++ Y+
Sbjct: 283 DVGKLAAFGWRATTSLEDGMKRAYQAYL 310
>gi|431928657|ref|YP_007241691.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas stutzeri RCH2]
gi|431826944|gb|AGA88061.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas stutzeri RCH2]
Length = 307
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 222
NL + + + +GVK+ LF SSA +Y E ++ D K +K SE++
Sbjct: 94 NLVGTLNLCEAMREAGVKRVLFASSAAVYGNNGEGQAIDEDTPKAPLTPYAADKLASEHY 153
Query: 223 SNWASFRPQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFT 266
++ +R Q+ + G +D F +R + P+ + G G Q
Sbjct: 154 LDF--YRRQHGLEPVVFRFFNIFGPRQDPSSPYSGVISIFTERAQKGLPIAVFGDGEQTR 211
Query: 267 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 326
+ +V DL +L A+E+PEAA + N+ ++A +L+ + + G E+ + +
Sbjct: 212 DFVYVGDLVEVLVQALESPEAAEGAV-NVGLNQATSLNQLLEAIGDVLGGLPEVSYQASR 270
Query: 327 AAGIDAKKAFPFRNMHFYAEP 347
+ I +A R + Y P
Sbjct: 271 SGDIRHSRANNARLVQRYRLP 291
>gi|223939597|ref|ZP_03631472.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514]
gi|223891755|gb|EEF58241.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514]
Length = 313
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 137/331 (41%), Gaps = 55/331 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVL+ +GG IG +LA+ L G V ++ + +S K + R ++ + +
Sbjct: 2 KVLV----TGGAGFIGSHLAEALCRRGARVVVLD--NLSSGKTSNLDWKRSSDDL----E 51
Query: 136 TVWGDPAE---VGNVVGG--------------VTFDVVLDNNGKNLDAVRPVADWAKSSG 178
+ GD A+ V +++ G ++ L+ + N+D + A+++G
Sbjct: 52 CIQGDVADELLVKDLIQGCEWVFHEAAMTSVPISVAKPLETHQHNVDGTLRLLILARAAG 111
Query: 179 VKQFLFISSAGIYKPADEPPHVEGDVVKPD-AGHVQVEKYISENFSNW---------ASF 228
VK+FLF SS+ IY D P + + + P ++K+ +E + S
Sbjct: 112 VKRFLFASSSSIY--GDSPLTSKHESMPPAPLSPYALQKFAAEKYCQLFHQLYDLPTVSL 169
Query: 229 RPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
R + G D F +++ +P I G G+Q + ++ ++ A E
Sbjct: 170 RYFNVFGPRQAFDSPYSGVIAKFCTSMLQGQPPTIYGDGLQSRDFTYIENVIQANLAAAE 229
Query: 284 NP-EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMH 342
P + +FN+ + ++++L + + Q G ++ ++P G D K H
Sbjct: 230 APSDKVIGKVFNIAAGQSISLLQLFRELNQLTGQSLK-PRFEPARLG-DVK--------H 279
Query: 343 FYAEPRAAKDILGWRSTTNLPEDLKERFEEY 373
A+ AAK LG+ N LK E Y
Sbjct: 280 SQADISAAKQALGYEPKVNWQAGLKRTLEFY 310
>gi|402698219|ref|ZP_10846198.1| NAD-dependent lipopolysaccharide biosynthesis-related
epimerase/dehydratase [Pseudomonas fragi A22]
Length = 309
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 100/266 (37%), Gaps = 41/266 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTI---MTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
+GG IG L LL GH V I M+ G + M P V+ D
Sbjct: 9 TGGAGFIGSNLVDALLAKGHAVRILDDMSTGKRCNLPMDNPKVELIEGDVA--------D 60
Query: 141 PAEVGNVVGGVTFDVVL--------------DNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
A V V+ G + V L + N V + + SGVK+ +F S
Sbjct: 61 AALVARVMAGCSAVVHLAAVASVQASVDDPVRTHQSNFIGTLNVCEAMRESGVKRVVFAS 120
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW---------ASFRPQYMIG-- 235
SA +Y E + D K +K SE + ++ A FR + G
Sbjct: 121 SAAVYGNNGEGESIVEDTPKAPLTPYASDKLASEYYLDFYRRQHGLEPAIFRLFNVFGPR 180
Query: 236 ---SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
S F +R V+ P+ I G G Q + +V DL ++L AVE + +
Sbjct: 181 QDPSSPYSGVISIFSERAVKGLPITIFGDGEQTRDFIYVGDLVNILVQAVEARQVEEGAV 240
Query: 293 FNLVSDRAVTLDGMAK-LCAQAAGLP 317
N+ ++A TL M + L GLP
Sbjct: 241 -NVGLNKATTLKQMLEALGDVVGGLP 265
>gi|390573507|ref|ZP_10253678.1| GDP-L-fucose synthase [Burkholderia terrae BS001]
gi|389934502|gb|EIM96459.1| GDP-L-fucose synthase [Burkholderia terrae BS001]
Length = 313
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 122/317 (38%), Gaps = 47/317 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G L + L G+ I+T D + +P F E + ++ A+
Sbjct: 13 AGHRGMVGSALVRNLQAKGY-TNILTRTRAELDLLDQPAVRAFLE--AERPDYIFVAAAK 69
Query: 144 VGNVVGGVTF--DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP---- 197
VG + T+ D + +N L + + A +G+ + F+ S+ IY P D P
Sbjct: 70 VGGIYANNTYGADFIFEN----LAVEANIINGAHRAGIDRLCFLGSSCIY-PRDCPQPIK 124
Query: 198 ----------PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEE-WF 246
P E + AG E Y + + S P + G+ +N D
Sbjct: 125 EEYLLTGPLEPTNEPYAIAKIAGVKMCESYNRQYGRRYVSVMPTNLYGANDNYDLNNSHV 184
Query: 247 FDRIVRKR---------PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
++RK + + GSG V DL+ +E+ S +FN+ +
Sbjct: 185 LPALIRKTHEAKARGDSELVVWGSGKPMREFLFVDDLADACVFLMES--GVSEGLFNVGT 242
Query: 298 DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWR 357
+ VT+ +A+ G +IV K G K N+ E LGW+
Sbjct: 243 GQDVTIRELAETVMSVVGFDGKIVFDASKPDGTPRK----LLNVERMRE-------LGWQ 291
Query: 358 STTNLPEDLKERFEEYV 374
+TT+L E + E + +++
Sbjct: 292 ATTSLREGIAEAYADFL 308
>gi|419782083|ref|ZP_14307894.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK610]
gi|383183724|gb|EIC76259.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK610]
Length = 326
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 140/351 (39%), Gaps = 77/351 (21%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGD--ENS-------DKMKKP 121
KKVL+ +G +G Y+ +EL G++V VG ENS D K+
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQHGYQVRAFGRNRKVGQSFENSLVTFFQGDLTKQE 57
Query: 122 PFNR----FNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ + +V AG TVWG +D N+ + V + +
Sbjct: 58 DLTQACQGMDMVVHAGALSTVWGP---------------WVDFYQTNVLGTKYVLEACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P D+ E D + + + YI ++ F
Sbjct: 103 TGIQRLVYVSSPSIYAAPRDQLAIKESDAPQEN----NLNNYIRSKLASEKLFKDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G+Q ++ V +++ + LA+E
Sbjct: 159 SIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGLQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAFPFRNMHF 343
P+ AS ++N+ + + + + P+ P + I + F ++ +
Sbjct: 217 PQ-ASGEVYNITNGEPRAFKDLIEETLRGLDYPITYRKVPAPLLSVIASSLEFLYKVLKL 275
Query: 344 YAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 375
EP +A +D LG+R ++ E +++ ++Y K
Sbjct: 276 KGEPALTRYTYYLLRYSQTLDISKAERD-LGYRPQISISEGIEQYVQDYRK 325
>gi|425438159|ref|ZP_18818568.1| UDP-glucose 4-epimerase [Microcystis aeruginosa PCC 9432]
gi|389676719|emb|CCH94292.1| UDP-glucose 4-epimerase [Microcystis aeruginosa PCC 9432]
Length = 326
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYI----SENFSNWAS 227
+GVK F+FISS G + E PD+ + +Q E+ + ++ W
Sbjct: 106 QAGVKHFIFISSIGAMTTQSDRILTENSPCHPDSPYGRSKLQAEQALINLAKDSNMTWTI 165
Query: 228 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVENPE 286
RP + G GN + E +++ KR +P+P G+ + V +L + + +++P
Sbjct: 166 IRPTLVYGPGNPGNMERLM--KLI-KRGLPLPFGAIKNRRSFVFVGNLVAAIITCLDHPN 222
Query: 287 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
AA+ IF + ++AV+ + +L AQ P +++
Sbjct: 223 AANQ-IFLISDNQAVSTPQLIRLIAQQIQQPCQLL 256
>gi|383764932|ref|YP_005443914.1| putative nucleotide sugar epimerase/dehydratase [Caldilinea
aerophila DSM 14535 = NBRC 104270]
gi|381385200|dbj|BAM02017.1| putative nucleotide sugar epimerase/dehydratase [Caldilinea
aerophila DSM 14535 = NBRC 104270]
Length = 330
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 18/155 (11%)
Query: 227 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 286
++ P+ +I N + WF + + + + G G Q ++ +V D+ L V +
Sbjct: 185 TYGPRQLI-RHNRQGFIGWFVRLAIEGKTIQLYGDGQQLRDLTYVDDVVDAF-LRVGVSD 242
Query: 287 AASSNIFNLVSDRAVTLDGMAKLCAQAAGL-PVEIVHYDPKAAGIDAKKAFPFRNMHFYA 345
A +FNL + ++L +A+L Q AG VE++ + + ID Y+
Sbjct: 243 VAGGQVFNLGGQKPISLLALAELIVQLAGRGRVELIPWPEERKKIDIGNV--------YS 294
Query: 346 EPRAAKDILGWRSTTNLPEDLK-------ERFEEY 373
+ LGW TT L E L+ E FE Y
Sbjct: 295 SYARIQTTLGWSPTTPLEEGLRRMIAYYTEYFEHY 329
>gi|170288229|ref|YP_001738467.1| NAD-dependent epimerase/dehydratase [Thermotoga sp. RQ2]
gi|281411728|ref|YP_003345807.1| NAD-dependent epimerase/dehydratase [Thermotoga naphthophila
RKU-10]
gi|170175732|gb|ACB08784.1| NAD-dependent epimerase/dehydratase [Thermotoga sp. RQ2]
gi|281372831|gb|ADA66393.1| NAD-dependent epimerase/dehydratase [Thermotoga naphthophila
RKU-10]
Length = 309
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 88/212 (41%), Gaps = 27/212 (12%)
Query: 178 GVKQFLFISSAG-IY--------KPADEPPH-VEGDVVKPDAGHVQVEKYISENFSNWAS 227
GVK+F+F S+ G IY P E PH + + + + +E + E +
Sbjct: 108 GVKKFIFSSTGGAIYGENVKVFPTPETETPHPISPYGIAKYSIEMYLEFFAREYGLKYTV 167
Query: 228 FRPQYMIGSGNNKDCEE----WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
R + G + E F +R++R V I G G + +V D+ LA+E
Sbjct: 168 LRYANVYGPRQDPYGEAGVVAIFTERMLRGEEVHIFGDGEYVRDYVYVDDVVRANLLAME 227
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 343
+ +FN+ + R T++ + KL + G E V+ P+ D +K+
Sbjct: 228 K---GDNEVFNIGTGRGTTVNQLFKLLKEITGYDKEPVYKPPRKG--DVRKSI------- 275
Query: 344 YAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
+ AK+ LGW +L E LK E + K
Sbjct: 276 -LDYTKAKEKLGWEPKVSLEEGLKLTVEYFRK 306
>gi|118579849|ref|YP_901099.1| NAD-dependent epimerase/dehydratase [Pelobacter propionicus DSM
2379]
gi|118502559|gb|ABK99041.1| NAD-dependent epimerase/dehydratase [Pelobacter propionicus DSM
2379]
Length = 322
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 127/328 (38%), Gaps = 52/328 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G + ++L SG+E I+ E D + RF + + V+ A
Sbjct: 10 AGHRGMVGSAIVRQLRASGYENLILRTSKE-LDLRDQQTTARF--LAEERPEYVFLTAAR 66
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-----KPADE-- 196
VG +V ++ +N NL + + +GVK+ LF+ S IY +P E
Sbjct: 67 VGGIVANSSYPAEFIHN--NLLIQENIIHNSWKNGVKRLLFLGSTCIYPRLAPQPLKEEY 124
Query: 197 ------PPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDR 249
P + V AG Q Y + +N+ + P + G G+N D E
Sbjct: 125 LMSGPLEPTNDAYAVAKIAGIYQCRSYNRQYGTNYLAIMPNNLYGPGDNFDLETSHVLPA 184
Query: 250 IVRK---------RPVPIPGSGMQFTNIAHVRDLSS----MLTL-------AVENPEAAS 289
++RK V + GSG V DL+ ++ L + +P A +
Sbjct: 185 LIRKFHEAKESEASTVTVWGSGSPLREFLQVDDLAEACLFLMNLDDDRFDTLLNDPVAPA 244
Query: 290 SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRA 349
+ N+ S +++ +A L + G E++ K G K A +H
Sbjct: 245 --LINVGSGEELSIRDLALLVKEITGFDGELLFDRDKPDGTPRKLA-DLSRIH------- 294
Query: 350 AKDILGWRSTTNLPEDLKERFEEYVKIG 377
LGWR T L E + ++ +++ G
Sbjct: 295 ---TLGWRHRTGLKEGIAAAYQWFLENG 319
>gi|150376036|ref|YP_001312632.1| NAD-dependent epimerase/dehydratase [Sinorhizobium medicae WSM419]
gi|150030583|gb|ABR62699.1| NAD-dependent epimerase/dehydratase [Sinorhizobium medicae WSM419]
Length = 368
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 16/117 (13%)
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV--- 318
G Q + HVRD++ LA+E P AA ++ N+ S A + +A L A A G+P
Sbjct: 243 GRQKRDFVHVRDVARAFRLALEQPHAA-GHVINIGSGHAYAIADIASLLADAMGVPEIGP 301
Query: 319 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
EI+H KA D + F A+ A+D+LG+ L + L + F ++V+
Sbjct: 302 EIMH---KARSGDIRNCF--------ADISKARDLLGFEPAHRLEDSLAD-FAQWVR 346
>gi|427817423|ref|ZP_18984486.1| putative UDP-glucose 4-epimerase [Bordetella bronchiseptica D445]
gi|410568423|emb|CCN16461.1| putative UDP-glucose 4-epimerase [Bordetella bronchiseptica D445]
Length = 307
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 75/163 (46%), Gaps = 10/163 (6%)
Query: 155 VVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ- 213
V + + +D+ V D+ G + ++ SS+ +Y D E ++ G+V
Sbjct: 86 VAIAQTNRRIDST--VIDFCHEIGAR-LVYCSSSSVYGRLDSTEVAESRALERATGYVAE 142
Query: 214 ---VEKYISENFSNWASFRPQYMIGSGN-NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 269
E+ I++ ++A+ R G G + F +R ++ P+ G+G + +
Sbjct: 143 KIWAEEEIAKRLPSYATLRLCAPYGPGQKTRTVLRIFIERALQGAPILYFGTGSREQDFV 202
Query: 270 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
HVRD+++ + A++ P + +FN+ R +T+ + L ++
Sbjct: 203 HVRDIAAAIVAALDRPTV--NGVFNISGGRPITMRELGMLVSR 243
>gi|406927147|gb|EKD63223.1| hypothetical protein ACD_51C00316G0018 [uncultured bacterium]
Length = 344
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 179 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-NFSNWASFRPQYMI--- 234
V++F+ IS++ +Y A++ E ++ P + + + +S W ++ MI
Sbjct: 120 VERFIHISTSEVYGTAEKELMDEEHILNPRSPYAGAKAGADRLVYSYWCTYDLPVMIIRP 179
Query: 235 --GSGNNKDCEEW---FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
G N+ E+ F ++ P+ + G G+ + +V+D + A+ P+ +S
Sbjct: 180 FNNYGPNQHLEKMMPRFITSALKDEPLTVHGQGLAERDWLYVQDHCEAIDQALNLPDFSS 239
Query: 290 --SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 347
+ N+ ++RAV++ +AK+ + G P ++ Y G + H +
Sbjct: 240 IRQQVINIGTERAVSVMDIAKIILKQLGKPENMIKYIFDRPGQVER--------HISSTE 291
Query: 348 RAAKDILGWRSTTNLPEDLKERFEEY 373
+A K +L W++ TNL E + + + Y
Sbjct: 292 KAEK-LLNWKAKTNLEEGIIKTIDWY 316
>gi|356960110|ref|ZP_09063092.1| NAD-dependent epimerase/dehydratase [gamma proteobacterium SCGC
AAA001-B15]
Length = 337
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 132/342 (38%), Gaps = 71/342 (20%)
Query: 70 SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE----NSDKMKKPPFNR 125
S + KKVL+ +GG +IG L + LL G +VT++++ D + + K
Sbjct: 2 SFYQNKKVLV----TGGTGLIGVPLVEMLLNQGADVTVVSLDDSSRCPDGAQFKHADLRD 57
Query: 126 FNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVA-------------D 172
FN + V F +V + A RP + +
Sbjct: 58 FNTCIEVCANQ-------------EVVFQLVGIKGSPKMCAERPASFFVPTITFSFNMME 104
Query: 173 WAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP-------------DAGHVQVEKY-I 218
A+ +GV+ +LF SS G+Y+PAD E DV K +Q E Y I
Sbjct: 105 AARRAGVECYLFTSSIGVYEPAD--IFREDDVWKTFPSPNDRFAGWAKRMAELQAEAYKI 162
Query: 219 SENFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRK-----RPVPIPGSGMQFTNIAHVR 272
+ + RP + G +N D ++R+ P+ + G G + H +
Sbjct: 163 EYGWDRISIVRPANVYGPYDNFDPNNAMVIPSLIRRALEGESPLTVWGDGSSVRDFIHAK 222
Query: 273 DLSSMLTLAVENPEAASSNI-FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID 331
D++ + +AVE NI NL S V++ + + E++ K +G D
Sbjct: 223 DVARGMMMAVER----GINIPLNLGSGDGVSIREIVHQIVKHLDDGREVIWDTTKPSG-D 277
Query: 332 AKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 373
A + AK+I+ +++ +L + + E + Y
Sbjct: 278 ALRLMDMTR---------AKEIMNFKTKISLSDGISETMDWY 310
>gi|435847430|ref|YP_007309680.1| nucleoside-diphosphate-sugar epimerase [Natronococcus occultus SP4]
gi|433673698|gb|AGB37890.1| nucleoside-diphosphate-sugar epimerase [Natronococcus occultus SP4]
Length = 329
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 8/137 (5%)
Query: 227 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 286
+ RP + G + + +++ DR+ R V +PG G + A+V D++S L + E E
Sbjct: 157 AVRPCIVYGPHDYTERLDFWIDRVNRFDRVVVPGDGTNVWHRAYVEDVASALRIVAERGE 216
Query: 287 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNM-H 342
A + +N+ R TL+ L A VE+V P+ A I+ +R H
Sbjct: 217 AGEA--YNVGDRRLATLEETLGLIADQLDTTVEVVTAGPRELAAGDIEPADYVLYREYPH 274
Query: 343 FYAEPRAAKDILGWRST 359
A + A LGW ST
Sbjct: 275 VLATGKLAG--LGWEST 289
>gi|414167836|ref|ZP_11424040.1| hypothetical protein HMPREF9696_01895 [Afipia clevelandensis ATCC
49720]
gi|410887879|gb|EKS35683.1| hypothetical protein HMPREF9696_01895 [Afipia clevelandensis ATCC
49720]
Length = 316
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 131/328 (39%), Gaps = 56/328 (17%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K+V + +G ++G +A+ L + V I+T D + + NR+ +
Sbjct: 11 KRVFV----AGHRGMVGSAIARRL--ARENVDILTAPRSELDLLDQAAVNRW--FAANRP 62
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KP 193
+ V+ A+VG +V T +NL V A GV++ LF+ S+ IY K
Sbjct: 63 QVVFHAAAKVGGIVANNTLRAEFIY--ENLLIATNVIHAAHEHGVEKLLFLGSSCIYPKL 120
Query: 194 ADEPPHVEG---DVVKPD---------AGHVQVEKYISENFSNWASFRPQYMIGSGNNKD 241
A +P + D ++P AG E Y + S++ S P + G G+N
Sbjct: 121 APQPLREDSLLTDTLEPTNEPYAIAKIAGVKMAEAYRDQYGSDFISIMPTNLYGPGDNYH 180
Query: 242 CE-EWFFDRIVRK---------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
E ++R+ R V + G+G +V D++ ++ +
Sbjct: 181 PEYSHVVAALIRRFHEAKETGAREVVVWGTGTPRREFLYVDDMADASVHLMKT--YSEGG 238
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAK 351
+ N+ + +++ A++ A+ G EIV + G PR
Sbjct: 239 LINVGTGEDISIADFARVVAKTVGYTGEIVFDTSRPDGT----------------PRKLL 282
Query: 352 DI-----LGWRSTTNLPEDLKERFEEYV 374
D+ GWR+TT+L + +K ++ Y+
Sbjct: 283 DVGKLAAFGWRATTSLEDGMKRAYQAYL 310
>gi|407724042|ref|YP_006843703.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti Rm41]
gi|407324102|emb|CCM72703.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti Rm41]
Length = 368
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 10/114 (8%)
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
G Q + HVRD++ LA+E P AA ++ N+ S A + +A L A+A G+P EI
Sbjct: 243 GRQKRDFVHVRDVARAFRLALEQPHAA-GHVINIGSGNAYAIADIASLLAEAMGVP-EI- 299
Query: 322 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
+P+ I+ ++ RN +A+ A+D+LG+ L + L + F ++V+
Sbjct: 300 --EPEI--INKARSGDIRNC--FADIAKARDLLGFEPAHRLEDSLAD-FAQWVR 346
>gi|88603383|ref|YP_503561.1| NAD-dependent epimerase/dehydratase [Methanospirillum hungatei
JF-1]
gi|88188845|gb|ABD41842.1| NAD-dependent epimerase/dehydratase [Methanospirillum hungatei
JF-1]
Length = 313
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 131/324 (40%), Gaps = 53/324 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-----SDKMKKPPFNRFNEIVSAGGKTVW 138
+GG IG +L++ L G V I+ D SD ++ + + G + V
Sbjct: 8 TGGAGFIGSHLSQALAARGDRVIILDSLDSGKLCNISDLLEDDHVEFIEDTILNGSRLV- 66
Query: 139 GDPAEVGNVVGGV-----------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS 187
+ N + G+ + D N+ N+D + V + A+ + V + + SS
Sbjct: 67 ----SLCNGIDGIFHLAALVSVQRSIDDPRLNHRINIDGLFEVFEAARLARVPKIVLASS 122
Query: 188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GN 238
A +Y PPH E P + + V K +SE ++ A + Y + S G
Sbjct: 123 AALYGNDYLPPHKETFASVPLSPYA-VGKCLSELYA--AVYTDLYGVHSVCLRFFNVYGP 179
Query: 239 NKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+D F D I R I G G Q + +V D+ L L++E + S
Sbjct: 180 KQDPSSPYSGVISKFMDAISRDDGFTIFGDGEQTRDFVYVLDVVQALILSMEK---SVSG 236
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAK 351
+FN+ + +V+++ +A+ + +G V I + D + + H A+
Sbjct: 237 VFNVGTGASVSINHLARTIMEVSGKKVGIRYLDARDGEV----------RHSCADISKIS 286
Query: 352 DILGWRSTTNLPEDLKERFEEYVK 375
D +G++ +L E L E + +++
Sbjct: 287 DGMGYKPGYSLIEGLSETYSWWIE 310
>gi|17544806|ref|NP_518208.1| NADH-ubiquinone oxidoreductase [Ralstonia solanacearum GMI1000]
gi|17427095|emb|CAD13615.1| putative nadh-ubiquinone oxidoreductase oxidoreductase protein
[Ralstonia solanacearum GMI1000]
Length = 334
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 222
++D R V D + GVK+ L +S+ G PA + K D E+ ++ +
Sbjct: 112 HVDLPRRVVDACRRHGVKRLLHMSALGA-DPAGPSMYQRS---KGDG-----ERIVTGSD 162
Query: 223 SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLA 281
+W FRP + G G D F R+ R P VP+ + +F + +V D+++ A
Sbjct: 163 LDWTVFRPSVVFGPG---DHFLNLFARLQRLAPFVPLARAEARFQPV-YVDDVAAAFAHA 218
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
++NP A +++ LV R TL + + A+G P IV
Sbjct: 219 LDNP-ATFGHVYPLVGPRVYTLAELVRFAGTASGHPRWIV 257
>gi|220911268|ref|YP_002486577.1| NAD-dependent epimerase/dehydratase [Arthrobacter chlorophenolicus
A6]
gi|219858146|gb|ACL38488.1| NAD-dependent epimerase/dehydratase [Arthrobacter chlorophenolicus
A6]
Length = 350
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 97/251 (38%), Gaps = 26/251 (10%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG VI A+ + GH +TI+ G P E++ A + D A V
Sbjct: 29 GGTGVISAAAAEHAVALGHRLTILNRGRSTR------PVPDGAEVLHADVR----DVAAV 78
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGD 203
V+GG FD V D D + + + Q++FISSA Y KP P +E
Sbjct: 79 REVLGGREFDAVADFISYTPDQTQAGLELLRGR-TGQYVFISSASAYQKPPTRLPILEST 137
Query: 204 VVKPDAGHVQVEK----------YISENFSNWASFRPQYMIGSGNNKDCEEWF-FDRIVR 252
+K +K Y E+F RP + W R+
Sbjct: 138 PLKNPFWQYSRDKIACEELLFRAYRDEDFP-LTVVRPSHTYDRTKIAMVGGWTDIHRMRA 196
Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
PV + G G + H RD + + P+A + + + SD + + + +L A+
Sbjct: 197 GLPVMVHGDGTSLWTLTHSRDFAKAFVGLLGRPQAVGES-YTITSDEYLPWNQIYRLFAR 255
Query: 313 AAGLPV-EIVH 322
AAG+ E+VH
Sbjct: 256 AAGVAEPELVH 266
>gi|398354940|ref|YP_006400404.1| UDP-glucose 4-epimerase [Sinorhizobium fredii USDA 257]
gi|390130266|gb|AFL53647.1| putative UDP-glucose 4-epimerase [Sinorhizobium fredii USDA 257]
Length = 368
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 63/123 (51%), Gaps = 9/123 (7%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F R+ +P + G Q + HVRD++ L +E P+AA ++ N+ S A +
Sbjct: 227 FASRLANGQPPMVFEDGRQRRDFVHVRDVARAFRLVLEQPQAA-GHVINVGSGNAYAIAD 285
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
+A L A+A G+P + +P+ ++ ++ RN +A+ A+D+LG++ L +
Sbjct: 286 VACLLAEAMGVP----NLEPEI--MNKARSGDIRNC--FADISKARDLLGFQPAHRLEDS 337
Query: 366 LKE 368
L E
Sbjct: 338 LAE 340
>gi|423581301|ref|ZP_17557412.1| hypothetical protein IIA_02816 [Bacillus cereus VD014]
gi|401216066|gb|EJR22781.1| hypothetical protein IIA_02816 [Bacillus cereus VD014]
Length = 341
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 119/294 (40%), Gaps = 51/294 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G E L GHE+T+ G K F+ ++
Sbjct: 2 KILIL----GGTRFLGRAFVDEALQRGHEITLFNRG------TNKEIFSNVEQLT----- 46
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + T+DVV+D G + +R V + K + ++ ++FISS +YK D
Sbjct: 47 ---GDRNNDVSSLKNRTWDVVIDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSVYK--D 100
Query: 196 EPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF----------------------RPQ 231
PH E +++P+ Q++ + S++ + R
Sbjct: 101 WIPHDIKEDYILQPEPTEEQIKAVENGEISHYEHYGALKVLCEKEAEKYWPGRVLHVRAG 160
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G + D ++ R+ + V +PG + I ++D+++ EN A +
Sbjct: 161 LLSGMFDYTDRLPYWIQRVAKGGKVLVPGRKDRPVQIVDIKDVANWGLNMAENKNAGT-- 218
Query: 292 IFNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFY 344
FN+ S + +T++ + C + E V + + ++ K P+ M +
Sbjct: 219 -FNVTSPNYDLTMEELLNTCKKVTNSDAEFVWIE--ESFMNEHKVQPWTEMPLW 269
>gi|332706591|ref|ZP_08426652.1| nucleoside-diphosphate-sugar epimerase [Moorea producens 3L]
gi|332354475|gb|EGJ33954.1| nucleoside-diphosphate-sugar epimerase [Moorea producens 3L]
Length = 352
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 70/150 (46%), Gaps = 12/150 (8%)
Query: 180 KQFLFISSAGIYKPADEPPHVE------GDVVKPDA--GHVQVEKYISENFSNWASFRPQ 231
++F+ +S+ G++ + PP E GD+ + G + + + + RP
Sbjct: 118 QRFVHVSTIGVHGHVENPPGDENCPMHPGDIYQETKLEGELWIRDFAKKEGLPVTVVRPS 177
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G G + + + ++V ++ +PI G+G ++ HV DL++ L+ +P+A
Sbjct: 178 GIYGPGEKRFLKIF---KMVGRKWIPIIGNGSNLLHLIHVDDLTNFFILSATHPQAV-GE 233
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
+F S A+T M + ++ G+ + +
Sbjct: 234 VFICGSKEAITFQKMVSIISEYYGISFKFI 263
>gi|228921968|ref|ZP_04085279.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228837576|gb|EEM82906.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
Length = 326
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + +K G+K+ + +S+ IY DE +V + PDA H K+++E
Sbjct: 86 NVLGTKHIIEGSKKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDAFVNHYATTKHMAE 145
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 146 QAIDQAFMHGLPVITIRPRAVFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 203
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D V L
Sbjct: 204 NVVDALLLCMHSPKHTLGKKYNITNDERVNL 234
>gi|448667430|ref|ZP_21685930.1| NAD-dependent epimerase/dehydratase [Haloarcula amylolytica JCM
13557]
gi|445769998|gb|EMA21066.1| NAD-dependent epimerase/dehydratase [Haloarcula amylolytica JCM
13557]
Length = 327
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 118/299 (39%), Gaps = 42/299 (14%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG + E +G++VT++T G + PF +++ G D E
Sbjct: 8 GGGRFIGRHTVTEFRDAGYDVTMLTRG------QRSNPFAN-SDVTHIKGDRNERDTLET 60
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 204
+ DVV+D VR D + V +++ISS Y + P EG+
Sbjct: 61 AR--KQIDPDVVVDCVAYFPRDVRVATD--VFADVDAYVYISSGAAYG-VERTPKREGET 115
Query: 205 VKPDAGHV-------QVEKY-------------ISENFSNWASFRPQYMIGSGNNKDCEE 244
P AG E Y +E+ S RP + G + +
Sbjct: 116 --PLAGCTAEQATTDSAETYGPRKAEGDREVFAAAEDGVRAMSVRPTVVYGPHDYTERFA 173
Query: 245 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
++ DR+ + +P G+ +A+V D++S L L E A + +N+ + A TL
Sbjct: 174 YWVDRVAEYDRIVVPSDGLSLWQMAYVEDVASALRLVAERGTAGEA--YNVGDEHAPTLR 231
Query: 305 GMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFP-FRNMHFYAEPRAAKDILGWRST 359
L A+ VE + + AAG+D+ FP +R+ +D LGW ST
Sbjct: 232 QWIGLLAKVHETDVETIGVGERELAAAGLDSDD-FPIYRDSPHLLSTAKLRD-LGWSST 288
>gi|83309162|ref|YP_419426.1| nucleoside-diphosphate-sugar epimerase [Magnetospirillum magneticum
AMB-1]
gi|82944003|dbj|BAE48867.1| Nucleoside-diphosphate-sugar epimerase [Magnetospirillum magneticum
AMB-1]
Length = 338
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 114/282 (40%), Gaps = 42/282 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G L +LL GH+VT++ + D F ++ + V GD +
Sbjct: 18 TGGAGYVGSALVPKLLAEGHKVTVLDLYLYGED--------LFADLRGPNLREVKGDIRD 69
Query: 144 VGNVVGGVT-FDVVLD--------------NNGK--NLDAVRPVADWAKSSGVKQFLFIS 186
+ V + D V+ N G+ N +A RP+ AK++GVK+F++ S
Sbjct: 70 IKVVEDALKGCDCVIHLACISNDPSYDLDPNLGRSINYEAFRPMVRAAKAAGVKRFIYAS 129
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS-------NWASFRPQYMIGSGNN 239
S+ +Y DEP E ++P + + + + + RP + G
Sbjct: 130 SSSVYGVKDEPEVTEDLPLEPLTDYSKFKALCEQELEAEREPGFAVCTIRPSTVCGYAKR 189
Query: 240 KDCE---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNL 295
+ + F ++ V + + G + NI H+ D+ ++ P E I+N
Sbjct: 190 QRLDVVVNIFTNQAVNNGKIRVTGGPQKRPNI-HIDDMVRCYLHLLQQPAEKIDGKIWN- 247
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHY---DPKAAGIDAKK 334
D + +A++ + G VEI DP++ + KK
Sbjct: 248 AGDTNFPISELAEIVRKVVG-QVEIETLPTNDPRSYHVSGKK 288
>gi|284046947|ref|YP_003397287.1| NAD-dependent epimerase/dehydratase [Conexibacter woesei DSM 14684]
gi|283951168|gb|ADB53912.1| NAD-dependent epimerase/dehydratase [Conexibacter woesei DSM 14684]
Length = 329
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 90/214 (42%), Gaps = 27/214 (12%)
Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA-----------GHVQVEKYISENF 222
A GV++F ++SS+ +++ A E P E + + G V +E+
Sbjct: 103 ALDHGVERFTYVSSSMVFENATEYPTTEAYLPQCPTPTSAYGFSKLTGEVYCRAAHAEHG 162
Query: 223 SNWASFRPQYMIGSGNNKDCE---EWFFDRIVRK-----RPVPIPGSGMQFTNIAHVRDL 274
+ RP G G D E +++K +P+ I GSG Q + H+ D+
Sbjct: 163 LPYTICRPFNAYGPGEMPDPEPGIAHMVPDVIKKVLGGQKPLEIFGSGKQTRTLTHIDDI 222
Query: 275 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKK 334
+ + +A +P A + + FN+ + +T+ A++ + G DP A +
Sbjct: 223 ADGIVVATGHPAALNED-FNISASEELTIAETARIIWEECG-------EDPAAFRLKHLP 274
Query: 335 AFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 368
F + + A+++LGW S ++ E + +
Sbjct: 275 TFEVDVVRRWPSVEKARELLGWESRISVREGIAQ 308
>gi|30265466|ref|NP_847843.1| hypothetical protein BA_5697 [Bacillus anthracis str. Ames]
gi|47531032|ref|YP_022381.1| hypothetical protein GBAA_5697 [Bacillus anthracis str. 'Ames
Ancestor']
gi|165872540|ref|ZP_02217173.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167636229|ref|ZP_02394532.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|167641437|ref|ZP_02399687.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170689195|ref|ZP_02880392.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|170708645|ref|ZP_02899084.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|177651896|ref|ZP_02934479.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190568930|ref|ZP_03021832.1| conserved hypothetical protein [Bacillus anthracis str.
Tsiankovskii-I]
gi|227818217|ref|YP_002818226.1| hypothetical protein BAMEG_5745 [Bacillus anthracis str. CDC 684]
gi|229600447|ref|YP_002869657.1| hypothetical protein BAA_5728 [Bacillus anthracis str. A0248]
gi|254687111|ref|ZP_05150969.1| hypothetical protein BantC_25173 [Bacillus anthracis str.
CNEVA-9066]
gi|254733555|ref|ZP_05191276.1| hypothetical protein BantWNA_00120 [Bacillus anthracis str. Western
North America USA6153]
gi|254742168|ref|ZP_05199855.1| hypothetical protein BantKB_14343 [Bacillus anthracis str. Kruger
B]
gi|254755922|ref|ZP_05207954.1| hypothetical protein BantV_25914 [Bacillus anthracis str. Vollum]
gi|254761634|ref|ZP_05213654.1| hypothetical protein BantA9_25253 [Bacillus anthracis str.
Australia 94]
gi|421508099|ref|ZP_15955015.1| hypothetical protein B353_09886 [Bacillus anthracis str. UR-1]
gi|421640445|ref|ZP_16081028.1| hypothetical protein BABF1_25576 [Bacillus anthracis str. BF1]
gi|30260144|gb|AAP29329.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
gi|47506180|gb|AAT34856.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|164711763|gb|EDR17307.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167510612|gb|EDR86008.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|167528344|gb|EDR91115.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|170126427|gb|EDS95315.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|170666838|gb|EDT17604.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|172082600|gb|EDT67664.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190559997|gb|EDV13980.1| conserved hypothetical protein [Bacillus anthracis str.
Tsiankovskii-I]
gi|227007208|gb|ACP16951.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
gi|229264855|gb|ACQ46492.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
gi|401821902|gb|EJT21056.1| hypothetical protein B353_09886 [Bacillus anthracis str. UR-1]
gi|403392398|gb|EJY89651.1| hypothetical protein BABF1_25576 [Bacillus anthracis str. BF1]
Length = 292
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 40/203 (19%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVS 131
KKVL++ GG G +L + LL GH+VTI T G D +K+ +R
Sbjct: 4 KKVLVL----GGTRFFGKHLVEALLKDGHDVTIATRGITEDSFGGTVKRLIVDR------ 53
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
D ++ + + G ++D+V DN + +A + V ++ K + +++ SS +Y
Sbjct: 54 -------EDEKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGT-TNKYIMTSSMAVY 105
Query: 192 KPA------DEPPH----VEGDVVKPDAGHVQVEKYISENFS-NWASF-----RPQYMIG 235
PA D P+ V GD D G K ++E A+F R +IG
Sbjct: 106 TPALNLSEEDFNPYEYAIVYGDRNDFDYGE---GKRVAEAVVFQQATFPVVAVRFPVVIG 162
Query: 236 SGNNKDCEEWFFDRIVRKRPVPI 258
+ +++ + IVRK PV +
Sbjct: 163 ENDYTKRLQFYVEHIVRKEPVAV 185
>gi|383314399|ref|YP_005375254.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis P54B96]
gi|384509001|ref|YP_005685669.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis I19]
gi|308276588|gb|ADO26487.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis I19]
gi|380869900|gb|AFF22374.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis P54B96]
Length = 327
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 129/338 (38%), Gaps = 66/338 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G A LL GHEVTI+ D S K E V AG + GD +
Sbjct: 6 TGGAGYVGSVCAAVLLEQGHEVTIV---DNFSTGNK--------EAVPAGATLMEGDIRD 54
Query: 144 -VGNVVGGVTFDVVLDNNGKNL---DAVRPVADWA-------------KSSGVKQFLFIS 186
G V+ ++D VL ++L +P W +++ V +F S
Sbjct: 55 KAGEVLASDSYDAVLHFAARSLVGESVEKPSEYWQHNFVTTLALLDAMRANKVTNLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIGS-- 236
+A Y P E +P + + I +++A S R + G+
Sbjct: 115 TAATYGEPASVPITEDFPTQPTNPYGATKLAIDHAITSYAQAYGLSATSLRYFNVAGAYG 174
Query: 237 --GNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVE 283
G N++ E I++ + + I G G + H+RDL+ LA+E
Sbjct: 175 SIGENREVETHLIPLILQVALGHRDKILIFGDDWPTEDGTAVRDYIHIRDLADAHVLAME 234
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG--LPVEIVHYDPKAAGIDAKKAFPFRNM 341
+ + IFNL S ++ + K C G +P E+ P+ AG A
Sbjct: 235 SNKPGIHRIFNLGSGEGFSVKQVIKACRDVTGHPIPAEVA---PRRAGDPAV-------- 283
Query: 342 HFYAEPRAAKDILGWRST-TNLPEDLKERFEEYVKIGR 378
A A+ LGW T T+L +++ + K+G
Sbjct: 284 -LIASSAKAQSELGWNPTRTDLSTIVEDAWSFTSKLGE 320
>gi|65317428|ref|ZP_00390387.1| COG0451: Nucleoside-diphosphate-sugar epimerases [Bacillus
anthracis str. A2012]
gi|386739312|ref|YP_006212493.1| hypothetical protein [Bacillus anthracis str. H9401]
gi|384389163|gb|AFH86824.1| Hypothetical Protein H9401_5440 [Bacillus anthracis str. H9401]
Length = 293
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 40/203 (19%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVS 131
KKVL++ GG G +L + LL GH+VTI T G D +K+ +R
Sbjct: 5 KKVLVL----GGTRFFGKHLVEALLKDGHDVTIATRGITEDSFGGTVKRLIVDR------ 54
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
D ++ + + G ++D+V DN + +A + V ++ K + +++ SS +Y
Sbjct: 55 -------EDEKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGT-TNKYIMTSSMAVY 106
Query: 192 KPA------DEPPH----VEGDVVKPDAGHVQVEKYISENFS-NWASF-----RPQYMIG 235
PA D P+ V GD D G K ++E A+F R +IG
Sbjct: 107 TPALNLSEEDFNPYEYAIVYGDRNDFDYGE---GKRVAEAVVFQQATFPVVAVRFPVVIG 163
Query: 236 SGNNKDCEEWFFDRIVRKRPVPI 258
+ +++ + IVRK PV +
Sbjct: 164 ENDYTKRLQFYVEHIVRKEPVAV 186
>gi|49188285|ref|YP_031538.1| hypothetical protein BAS5301 [Bacillus anthracis str. Sterne]
gi|49182212|gb|AAT57588.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
Length = 290
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 40/203 (19%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVS 131
KKVL++ GG G +L + LL GH+VTI T G D +K+ +R
Sbjct: 2 KKVLVL----GGTRFFGKHLVEALLKDGHDVTIATRGITEDSFGGTVKRLIVDR------ 51
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
D ++ + + G ++D+V DN + +A + V ++ K + +++ SS +Y
Sbjct: 52 -------EDEKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGT-TNKYIMTSSMAVY 103
Query: 192 KPA------DEPPH----VEGDVVKPDAGHVQVEKYISENFS-NWASF-----RPQYMIG 235
PA D P+ V GD D G K ++E A+F R +IG
Sbjct: 104 TPALNLSEEDFNPYEYAIVYGDRNDFDYGE---GKRVAEAVVFQQATFPVVAVRFPVVIG 160
Query: 236 SGNNKDCEEWFFDRIVRKRPVPI 258
+ +++ + IVRK PV +
Sbjct: 161 ENDYTKRLQFYVEHIVRKEPVAV 183
>gi|345004938|ref|YP_004807791.1| NAD-dependent epimerase/dehydratase [halophilic archaeon DL31]
gi|344320564|gb|AEN05418.1| NAD-dependent epimerase/dehydratase [halophilic archaeon DL31]
Length = 317
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 84/220 (38%), Gaps = 33/220 (15%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV---VKPDAGHVQVEKYIS 219
N++ V + A G + F++ +++ IY +P + E V DA + E+Y +
Sbjct: 89 NIEGFVNVVEQAMEDGCETFVYATTSSIYGSQTDPCNEEMAVKAATGYDASMMGRERY-A 147
Query: 220 ENFSNWAS-------FRPQYMIGSGNNKDCEEW------FFDRIVRKRPVPIPGSGMQFT 266
E +S++ F Y GN + E+ F D+I + G G Q
Sbjct: 148 EYYSDFHGLTLAGMRFFSVYQGYGGNEEHKGEYANTISQFADKITEDESPVLWGDGTQTR 207
Query: 267 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 326
+ HV D+ L LA EN I+NL T + M ++ G V Y+P
Sbjct: 208 DFTHVMDIVRGLELAAENE---LDGIYNLGVGNPFTFNEMVEMINDELGTDVP-SEYEP- 262
Query: 327 AAGIDAKKAFPFRN--MHFYAEPRAAKDILGWRSTTNLPE 364
P N H +A+P K GW + E
Sbjct: 263 ---------VPLENYVYHTHADPSKFKQATGWEPEISFEE 293
>gi|254724106|ref|ZP_05185891.1| hypothetical protein BantA1_16823 [Bacillus anthracis str. A1055]
Length = 292
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 38/202 (18%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVS 131
KKVL++ GG G +L + LL GH+VTI T G D +K+ +R
Sbjct: 4 KKVLVL----GGTRFFGKHLVEALLKDGHDVTIATRGITEDSFGGTVKRLIVDR------ 53
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
D ++ + + G ++D+V DN + +A + V ++ K + +++ SS +Y
Sbjct: 54 -------EDEKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGT-TNKYIMTSSMAVY 105
Query: 192 KPA------DEPPH----VEGDVVKPDAGHVQVEKYISENFSNWASF-----RPQYMIGS 236
PA D P+ V GD + D + + ++ A+F R +IG
Sbjct: 106 TPALNLSEEDFNPYEYAIVYGD--RNDFDYGEGKRVAEAVVFQQATFPVVAVRFPVVIGE 163
Query: 237 GNNKDCEEWFFDRIVRKRPVPI 258
+ +++ + IVRK PV +
Sbjct: 164 NDYTKRLQFYVEHIVRKEPVAV 185
>gi|392942779|ref|ZP_10308421.1| nucleoside-diphosphate-sugar epimerase [Frankia sp. QA3]
gi|392286073|gb|EIV92097.1| nucleoside-diphosphate-sugar epimerase [Frankia sp. QA3]
Length = 330
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 102/264 (38%), Gaps = 33/264 (12%)
Query: 69 ASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE 128
++ + + +LI+ GG +G LA+ L H VT+ G N
Sbjct: 3 STISRPRSILIL----GGTRFVGRALAEAALADDHRVTLFHRGQTNPGLFPA-------- 50
Query: 129 IVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA 188
+TV GD + + G FD+V+D G + VR D A V +++++SS
Sbjct: 51 -----AETVLGDRTRDLSALAGRRFDIVVDVAGYDPPVVRRAVD-ALRGRVDRYVYVSSL 104
Query: 189 GIYKPADEPPHVEGDVVKPD----------AGHVQVEKYISENFSNWASF-RPQYMIGSG 237
+ P + +G +++ D A E+ + + F A RP ++G
Sbjct: 105 SVLADQSTPQNEDGALLELDDDTAPEKLYGARKAACERLVRDAFGAQALIVRPGLIVGPH 164
Query: 238 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
+ D ++ R R V +PG VRDL+S + +V + +FN V+
Sbjct: 165 DPTDRFAYWPRRFARGGRVLLPGDPRDLAQFIDVRDLASWIVRSVTS---GVGGVFN-VT 220
Query: 298 DRAVTLDGMAKLCAQAAGLPVEIV 321
+ C AG P V
Sbjct: 221 GSPLPFGAFFDACQAHAGTPATAV 244
>gi|218904363|ref|YP_002452197.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus AH820]
gi|218538882|gb|ACK91280.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus AH820]
Length = 328
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + ++ G+K+ + +S+ IY DE +V + PD H KY++E
Sbjct: 88 NVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAE 147
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 148 QAIDQAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 205
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D + L
Sbjct: 206 NVVDALLLCMHSPKHTLGQKYNITNDERINL 236
>gi|421590428|ref|ZP_16035435.1| NAD-dependent epimerase/dehydratase [Rhizobium sp. Pop5]
gi|403704427|gb|EJZ20312.1| NAD-dependent epimerase/dehydratase [Rhizobium sp. Pop5]
Length = 318
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 96/237 (40%), Gaps = 38/237 (16%)
Query: 162 KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP--------------PHVEGDVVKP 207
+NL V + A +GV++ LF+ S+ IY P D P P E +
Sbjct: 83 QNLMIETNVVNAAWQAGVERMLFLGSSCIY-PRDCPQPIREEYLLTGPLEPTNEPYAIAK 141
Query: 208 DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEE-WFFDRIVRK---------RPVP 257
AG E Y + + + S P + G +N D + ++RK R +
Sbjct: 142 IAGVKLCESYNRQYGTRYVSGMPTNLYGPNDNYDLDSSHVMPALIRKVHEAKVRGDRQLV 201
Query: 258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 317
+ GSG +V D++ +E+ S + N+ + +T+ +A+ + G
Sbjct: 202 VWGSGRPMREFLYVDDMADACVFLMESD--VSEGLINVGTGEDITIRELAETIMRVVGFK 259
Query: 318 VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 374
EIV+ K G K + R A LGWR+TT+L + + + + ++V
Sbjct: 260 GEIVYDQTKPDGTPRK---------LMSVDRLAA--LGWRATTSLSDGITQAYADFV 305
>gi|444913119|ref|ZP_21233273.1| hypothetical protein D187_05210 [Cystobacter fuscus DSM 2262]
gi|444716122|gb|ELW56977.1| hypothetical protein D187_05210 [Cystobacter fuscus DSM 2262]
Length = 382
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 104/258 (40%), Gaps = 37/258 (14%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K++LI+ GG A +G L + GH VT+ G +P F ++ G
Sbjct: 37 KRILIL----GGTAFLGPQLVEAARARGHTVTLFNRGK------TRPQL--FPDVEKLQG 84
Query: 135 KTVWGDP--AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
DP E + G T+D V+D +G VR A + V Q++FISS +YK
Sbjct: 85 DR---DPNKGEGLKALEGRTWDAVIDTSGYVPRLVRASAQ-LLAPHVGQYVFISSISVYK 140
Query: 193 PADEPPHVEGDVV----KPDAGHVQVEKY-----ISENFSNWA------SFRPQYMIGSG 237
P E V P + E Y + E + A + RP ++G
Sbjct: 141 DLSRPGLDETAPVATTSDPSNETIGEENYGALKALCEQEAEAAFPGRTTNIRPGLIVGPE 200
Query: 238 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
+ ++ +R+ R V PG G VRDL+ A++N + +FN
Sbjct: 201 DPTQRFTYWPERVARGGEVLAPGDGSDPVQFIDVRDLAEWTLHALDNRD---FGVFNATG 257
Query: 298 -DRAVTLDGMAKLCAQAA 314
R +T+ + + C QA+
Sbjct: 258 PTRPLTVRELLEACKQAS 275
>gi|414155533|ref|ZP_11411845.1| hypothetical protein HMPREF9186_00265 [Streptococcus sp. F0442]
gi|410873506|gb|EKS21441.1| hypothetical protein HMPREF9186_00265 [Streptococcus sp. F0442]
Length = 325
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 106/274 (38%), Gaps = 49/274 (17%)
Query: 111 GDENSDKMKKPPFNRFNEIVSAGG-KTVWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAV 167
GD +S + F + ++ AG T WG NVVG
Sbjct: 50 GDLSSIEELSQAFQEIDAVIHAGALSTAWGPWKAFYQANVVG-----------------T 92
Query: 168 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA-GHVQVEKYISENFSNWA 226
+ V D + VK+ +++SS IY + + D+ + DA + YI ++
Sbjct: 93 QNVLDLCREYAVKRLVYVSSPSIYAAGKD----QFDIKESDAPKENHLNNYIRSKLASEK 148
Query: 227 SF-----------RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS 275
F RP+ + G G+ R+ RK +P+ G Q ++ V +++
Sbjct: 149 LFPDYPDVPSIILRPRGLFGVGDTSILPRVL--RLSRKIGIPLIRGGEQLMDMTCVENVA 206
Query: 276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
+ LA+E E A ++N+ + T + + + G P + Y AG+ A A
Sbjct: 207 LAIRLALEAKE-AHGQVYNITNGEPKTFKYLIETTLKGLGEP---IRYRKIPAGLVAGVA 262
Query: 336 FP----FRNMHFYAEP---RAAKDILGWRSTTNL 362
+ +R H AEP R +L + T ++
Sbjct: 263 YSLEGLYRLFHLKAEPPLTRYTYYLLRYSQTLDI 296
>gi|229092196|ref|ZP_04223377.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
Rock3-42]
gi|228691187|gb|EEL44951.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
Rock3-42]
Length = 326
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + ++ G+K+ + +S+ IY DE +V + PD H KY++E
Sbjct: 86 NVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAE 145
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 146 QAIDHAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 203
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D + L
Sbjct: 204 NVVDALLLCMHSPKHTLGQKYNITNDERINL 234
>gi|448465391|ref|ZP_21598801.1| NAD-dependent epimerase/dehydratase [Halorubrum kocurii JCM 14978]
gi|445814982|gb|EMA64925.1| NAD-dependent epimerase/dehydratase [Halorubrum kocurii JCM 14978]
Length = 298
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 105/264 (39%), Gaps = 46/264 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG- 134
KVL+ +GG IG YL + L GHEVT ++ + P + + SA G
Sbjct: 2 KVLV----AGGTGFIGSYLCRALADGGHEVTALS----------RSPGDVPEGVASATGD 47
Query: 135 ----KTVWGDPAEVGNVVGGVTFDVVLDNNGKNL-------DAVRPVADWAKSSGVKQFL 183
++ G VV V + + G N+ R + A+ GV++F+
Sbjct: 48 VTDYDSIAGAVEGQDAVVNLVALSPLFEPKGGNIMHDRIHRGGTRNLVRAAEDGGVERFV 107
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGN----- 238
+S+ G AD +GD A + E + ++ +W FRP + G G
Sbjct: 108 QLSALG----AD----ADGDTAYIRA-KGEAEAIVRDSGLDWTIFRPSVVFGEGGEFVSF 158
Query: 239 NKDCEEWFFDRIVRKRPV-PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
K + F + P+ P+PG G HV DL ML A+E+ E + +
Sbjct: 159 TKRLKGMFAPGV----PLYPLPGGGKTRFQPIHVEDLVPMLVAALEDDEHVGET-YEVGG 213
Query: 298 DRAVTLDGMAKLCAQAAGLPVEIV 321
+TL + L +A V IV
Sbjct: 214 PETLTLRQVTDLVYEAENKGVTIV 237
>gi|229151401|ref|ZP_04279604.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
m1550]
gi|228631944|gb|EEK88570.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
m1550]
Length = 326
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + ++ G+K+ + +S+ IY DE +V + PD H KY++E
Sbjct: 86 NVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAE 145
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 146 QAIDQAFAQGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 203
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D + L
Sbjct: 204 NVVDALLLCMHSPKHTLGQKYNITNDERINL 234
>gi|407705605|ref|YP_006829190.1| C4-dicarboxylate anaerobic carrier [Bacillus thuringiensis MC28]
gi|407383290|gb|AFU13791.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus thuringiensis MC28]
Length = 328
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + ++ G+K+ + +S+ IY DE +V + PD H KY++E
Sbjct: 88 NVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAE 147
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 148 QAIDQAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 205
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D + L
Sbjct: 206 NVVDALLLCMHSPKHTLGQKYNITNDERINL 236
>gi|95929367|ref|ZP_01312110.1| NAD-dependent epimerase/dehydratase [Desulfuromonas acetoxidans DSM
684]
gi|95134483|gb|EAT16139.1| NAD-dependent epimerase/dehydratase [Desulfuromonas acetoxidans DSM
684]
Length = 310
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 116/310 (37%), Gaps = 39/310 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTV----------GDENSDKMKKPPFNRFNEIVS-A 132
+GG IG +L + LL GH VT++ G N + + F +++
Sbjct: 6 TGGAGFIGSHLTEMLLDQGHSVTVIDNFSTGKRSNLPGSSNHLTVHELDICNFEGVLNHT 65
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
G A + +V V + + + NLD + + A+ + F+F SSA IY
Sbjct: 66 KGADAIVHLAAIASVQASV--EAPRETHAINLDGTINMLEVARIHDISTFVFASSAAIYG 123
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNW---------ASFRPQYMIG-----SGN 238
+ P E P + V+K SE + ++ +FR + G S
Sbjct: 124 NNQQLPLKEDTPPAPLTPYA-VDKLGSEYYIDFYCRQFKLKTTTFRFFNVYGPRQDPSSP 182
Query: 239 NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
DR KRP + G G+Q + V+DL +L A +A S N NL +
Sbjct: 183 YSGVISILMDRAQNKRPFTVFGDGLQSRDFIFVKDLVEILCKAATQ-QAPSGNTINLGNG 241
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS 358
TL + + ++ +P+ I H A+ + + +
Sbjct: 242 IQTTLLELLSTVESLSNHKLDTSFEEPRPGDIK----------HSCADNTRLRQLFSYTP 291
Query: 359 TTNLPEDLKE 368
TN+ E LK+
Sbjct: 292 KTNIAEGLKQ 301
>gi|49478089|ref|YP_037324.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|49329645|gb|AAT60291.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus thuringiensis serovar konkukian str. 97-27]
Length = 328
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + ++ G+K+ + +S+ IY DE +V + PD H KY++E
Sbjct: 88 NVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAE 147
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 148 QAIDHAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 205
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D + L
Sbjct: 206 NVVDALLLCMHSPKHTLGQKYNITNDERINL 236
>gi|52142303|ref|YP_084525.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
E33L]
gi|301054729|ref|YP_003792940.1| NAD dependent epimerase/dehydratase [Bacillus cereus biovar
anthracis str. CI]
gi|423551055|ref|ZP_17527382.1| hypothetical protein IGW_01686 [Bacillus cereus ISP3191]
gi|51975772|gb|AAU17322.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus E33L]
gi|300376898|gb|ADK05802.1| putative NAD dependent epimerase/dehydratase family protein
[Bacillus cereus biovar anthracis str. CI]
gi|401188388|gb|EJQ95456.1| hypothetical protein IGW_01686 [Bacillus cereus ISP3191]
Length = 328
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + ++ G+K+ + +S+ IY DE +V + PD H KY++E
Sbjct: 88 NVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAE 147
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 148 QAIDQAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 205
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D + L
Sbjct: 206 NVVDALLLCMHSPKHTLGQKYNITNDERINL 236
>gi|365859313|ref|ZP_09399183.1| NAD dependent epimerase/dehydratase family protein
[Acetobacteraceae bacterium AT-5844]
gi|363712672|gb|EHL96349.1| NAD dependent epimerase/dehydratase family protein
[Acetobacteraceae bacterium AT-5844]
Length = 332
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 11/125 (8%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F DR++R V + G G Q + +V D+ ML LA + S+ ++N+ + + ++
Sbjct: 195 FCDRLLRGEAVDVFGDGQQTRDFVYVGDVVRML-LAAMPAASVSAPVYNVCTGKPTSVLE 253
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
+A A+ G +E+ H P+A I H +P A LG + T+L +
Sbjct: 254 LAATVAELCGTALEVRHQPPRAGEI----------RHSLGQPALASWKLGVEAATSLRQG 303
Query: 366 LKERF 370
L E
Sbjct: 304 LAETL 308
>gi|296117740|ref|ZP_06836324.1| UDP-glucose 4-epimerase [Corynebacterium ammoniagenes DSM 20306]
gi|295969471|gb|EFG82712.1| UDP-glucose 4-epimerase [Corynebacterium ammoniagenes DSM 20306]
Length = 329
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 108/275 (39%), Gaps = 51/275 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G A L+ +GHEVTI+ D NR E V A V GD A
Sbjct: 6 TGGAGYVGSVCAATLVEAGHEVTII-------DNFSTG--NR--EAVPAQATLVEGDVAN 54
Query: 144 -VGNVVGGVTFDVVLDNNGKNL---DAVRPVADWA-------------KSSGVKQFLFIS 186
VG+V+G FD V+ ++L P W +++ V +F S
Sbjct: 55 VVGDVLGQGGFDGVVHFAARSLVGESVAMPAEYWQHNVVTTLTLLEAMRANDVSNLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIGS-- 236
+A Y +E P E +P + + I +++A S R + G+
Sbjct: 115 TAATYGEPEEVPITESMPTQPTNPYGASKLAIDYMITSYAKAYGFGATSLRYFNVAGAYG 174
Query: 237 --GNNKDCEEWFFDRIVR-----KRPVPIPG------SGMQFTNIAHVRDLSSMLTLAVE 283
G N++ E I++ + + I G G + HVRDL+ LA+E
Sbjct: 175 EIGENREVETHLIPIILQVALGHRDKIFIFGDDWDTVDGTAVRDYIHVRDLADAHLLALE 234
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
+ IFNL S ++ + + C + G P+
Sbjct: 235 ANVSGEHRIFNLGSGDGYSVKQVIETCREVTGHPI 269
>gi|118478511|ref|YP_895662.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus thuringiensis str. Al Hakam]
gi|196042963|ref|ZP_03110202.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus 03BB108]
gi|225865160|ref|YP_002750538.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus 03BB102]
gi|376267079|ref|YP_005119791.1| Nucleoside-diphosphate-sugar epimerase [Bacillus cereus F837/76]
gi|118417736|gb|ABK86155.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus thuringiensis str. Al Hakam]
gi|196026447|gb|EDX65115.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus 03BB108]
gi|225788004|gb|ACO28221.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus 03BB102]
gi|364512879|gb|AEW56278.1| Nucleoside-diphosphate-sugar epimerase [Bacillus cereus F837/76]
Length = 328
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + ++ G+K+ + +S+ IY DE +V + PD H KY++E
Sbjct: 88 NVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAE 147
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 148 QAIDHAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 205
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D + L
Sbjct: 206 NVVDALLLCMHSPKHTLGQKYNITNDERINL 236
>gi|406984870|gb|EKE05778.1| NAD-dependent epimerase/dehydratase [uncultured bacterium]
Length = 352
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 113/278 (40%), Gaps = 65/278 (23%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-------ENSDKMKKPPF-- 123
E K +LI +GG +G L+ LLG G+ V+ V D EN +K P F
Sbjct: 4 EIKNILI----TGGAGYLGSTLSAYLLGLGYNVS---VADSHWFNKIENGFCIKNPKFKE 56
Query: 124 --------NRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNN---GKNLDAVRPVAD 172
N+ +++ + + VVG LD N G N VA+
Sbjct: 57 YYIDLRDTNKLCQLLKNCDAVI-----HLSGVVGDSA--CALDENFTFGCNYLNTFTVAN 109
Query: 173 WAKSSGVKQFLFISSAGIY------------KPADEPPHVEGDVVKPDAGHVQVEKYISE 220
AKS GVK FLF SS +Y P + + D +K + + ++ +E
Sbjct: 110 LAKSYGVKIFLFASSCSVYGSMAGSSALTENSPTNPLSYYANDKLKSEECVLSLK---NE 166
Query: 221 NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR--------KRPVPIPGSGMQFTNIAHVR 272
+FS FR + G + FD +V P+ I G G Q+ HV+
Sbjct: 167 SFSP-VVFRLSTLFGWS-----DRMRFDLVVNGLTARAAINEPIKIFG-GTQWRPFLHVK 219
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDR-AVTLDGMAKL 309
D S L + + + + IFN+ SD+ T++ +++L
Sbjct: 220 DASIAFELGLHSNKKIAGQIFNVGSDKNNFTINQISEL 257
>gi|335049051|ref|ZP_08542062.1| NAD dependent epimerase/dehydratase family protein [Megasphaera sp.
UPII 199-6]
gi|333764496|gb|EGL41890.1| NAD dependent epimerase/dehydratase family protein [Megasphaera sp.
UPII 199-6]
Length = 309
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 96/224 (42%), Gaps = 26/224 (11%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 222
N+ + + + + V++F+F SSA +Y P E + P + + + K +E +
Sbjct: 93 NVMGLVGILELCRRHTVRKFIFSSSAAVYGDNTRVPLKETEATTPLSFY-GLTKCTAEAY 151
Query: 223 SNWAS--FRPQYMI----------GSGNNKDCEEWFFDR-IVRKRPVPIPGSGMQFTNIA 269
F+ Y+I GN + + F + + + + + + G G Q +
Sbjct: 152 IRMYHDIFQVPYVILRYANVYGERQGGNGEGGVVFVFSQALAQGKEITVFGDGEQTRDFV 211
Query: 270 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
+V+D++ A++ + +N+ ++ T++ + ++ AG P VHY+P +G
Sbjct: 212 YVKDVARANVCALQ--ANGTEGTYNIATNIETTVNALKEMLVYIAGTPTH-VHYEPARSG 268
Query: 330 IDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 373
+ A +A +D LGW TT L L++ + +
Sbjct: 269 DIYRSVL--------ANTKAVQD-LGWEPTTKLLGGLQQTYRYF 303
>gi|254294169|ref|YP_003060192.1| NAD-dependent epimerase/dehydratase [Hirschia baltica ATCC 49814]
gi|254042700|gb|ACT59495.1| NAD-dependent epimerase/dehydratase [Hirschia baltica ATCC 49814]
Length = 324
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 94/229 (41%), Gaps = 26/229 (11%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 222
NL V ++A++SGV ++ SS+ IY + P E DV K +E
Sbjct: 103 NLQGFFNVLEYARNSGVANVVYASSSSIYGGNTKMPFAEDDVTDTPVSFYAATKKSNELM 162
Query: 223 SN---------WASFRPQYMIGSGNNKDCEEWFF-DRIVRKRPVPIPGSGMQFTNIAHVR 272
++ R + G D W F +++ R PV I +G + ++
Sbjct: 163 AHSYAHLYGISLTGLRFFTVYGEWGRPDMAYWIFSEKLRRNEPVQIFNNGDMSRDFTYID 222
Query: 273 DLSSMLTLAVENPEAASS-----NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 327
D+ + + A++ P +A ++NL +D+ L + +A G + I + P
Sbjct: 223 DIVTGVIAAIDRPASALGLDVPHRVYNLGNDKPEKLMDLVGCIEKAFGQEL-IKEFQPMQ 281
Query: 328 AGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI 376
G D ++ +A+ A+ LG+ T+L E + ERF + K
Sbjct: 282 LG-DVERT--------WADISRARKELGFNPHTSLEEGI-ERFASWFKF 320
>gi|220926124|ref|YP_002501426.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS
2060]
gi|219950731|gb|ACL61123.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS
2060]
Length = 305
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 126/325 (38%), Gaps = 51/325 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G + + L +G +++TV + D + R+ I V A+
Sbjct: 4 AGHRGMVGSAVVRRL-EAGERCSVLTVSRRDVDLTHQEATERW--IKQQRPDVVVLAAAK 60
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEP----- 197
VG ++ + D G+NL V + + GV++ LF+ S IY K A +P
Sbjct: 61 VGGILANSQYPA--DFIGQNLAIALNVIRASHAVGVRKLLFLGSTCIYPKFASQPLNEDA 118
Query: 198 -------PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEE-----W 245
P E V AG + Y ++ +++ S +P + G +N D
Sbjct: 119 LLTGPLEPTNEWYAVAKIAGIKLCQAYRLQHGNDFISAQPTNLYGPNDNYDLNSSHVMAA 178
Query: 246 FFDRIVRKR-----PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
+I R + V + G+G HV DL+ + ++N +S + D +
Sbjct: 179 LIAKIARAKQDSLDTVTVWGTGEPRREFLHVDDLADAVVFLIKNYSDETSINIGVGDDIS 238
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LG 355
+ Q A L EIV + + F F PR D+ LG
Sbjct: 239 IR---------QLAALIAEIVGWQGR---------FAFDTSKPDGTPRKLVDVSRLHSLG 280
Query: 356 WRSTTNLPEDLKERFEEYVKIGRDK 380
W++ +LP+ +++ + Y + R +
Sbjct: 281 WKARISLPDGIRQTYRAYQEQMRSR 305
>gi|406877036|gb|EKD26406.1| hypothetical protein ACD_79C01218G0001 [uncultured bacterium]
Length = 322
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 142/339 (41%), Gaps = 62/339 (18%)
Query: 78 LIVNTNSGGHAVIGFYLAKELLGSGHEVT--------------------IMTVGDENSDK 117
LI+ T S G IG+ ++K+LL GH+V ++ D + K
Sbjct: 6 LILVTGSAG--FIGYSVSKKLLEQGHKVIGIDCFSPYYDVTLKNARNNILLKYPDYSFKK 63
Query: 118 MKKPPFNRFNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVV--LDNNGKNLDAVRPVADWA 174
M N E+ S+ + V A+ GV + + + NL+ + + A
Sbjct: 64 MDLCNLNEVKELFSSNNIRYVCHLAAQ-----AGVRYSISHPYEYQKFNLEGFTHIIEEA 118
Query: 175 KSSG-VKQFLFISSAGIYKPADEPPHVEGDVV-KPDAGH---VQVEKYISENFSNW---- 225
K+S +K F++ SS+ +Y ++ P E D V KP A + + + I+ ++S+
Sbjct: 119 KNSNKIKNFVYASSSSVYGGNEKLPFSETDSVDKPLALYGATKRANELIAYSYSHLFKLP 178
Query: 226 -ASFRPQYMIGSGNNKDCEEWFFDR-IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
R + G D + F + I+ +P+ + G + ++ D+ + A++
Sbjct: 179 CTGLRFFTVYGPFGRPDMALFLFTKAIIEGKPIDVYNHGNMKRSFTYIDDIVDGVIAAIK 238
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR---N 340
NP IFNL +D++ TL +EI+ + + + + P +
Sbjct: 239 NP--FQYEIFNLGNDKSETLMRY-----------IEIIEKEVEKKSV--RNLLPLQPGDV 283
Query: 341 MHFYAEPRAAKDILGWRSTTNLPEDLK---ERFEEYVKI 376
+ YA+ A D LG+ TN+ E +K + + EY K+
Sbjct: 284 LQTYADISHAGDKLGFAPKTNIEEGIKCFVKWYREYYKV 322
>gi|423613391|ref|ZP_17589251.1| hypothetical protein IIM_04105 [Bacillus cereus VD107]
gi|401242553|gb|EJR48928.1| hypothetical protein IIM_04105 [Bacillus cereus VD107]
Length = 314
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 105/268 (39%), Gaps = 52/268 (19%)
Query: 142 AEVGNVVGGVTF--DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-----KPA 194
A+VG +V + D + DN L V D A SGVK+ LF+ S IY +P
Sbjct: 65 AKVGGIVANNQYPADFIRDN----LMIQTNVIDSAYRSGVKKLLFLGSTCIYPKMAPQPL 120
Query: 195 DEPPHVEGDV--------VKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EW 245
E + G++ + AG E Y + + + S P + G +N D
Sbjct: 121 KEEYLLTGELEPTNDAYAIAKIAGIKMCESYNRQYGTKYISVMPTNLYGPNDNFDLHTSH 180
Query: 246 FFDRIVRK---------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
++RK V + G+G + DL+ ++N E + I N+
Sbjct: 181 VLPALIRKFHEAKENNAEFVEVWGTGTPLREFLYSDDLADACVYLMDNYEG--NEIVNIG 238
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI--- 353
+ +++ +A+ + G E+ K G PR D+
Sbjct: 239 VGKDLSIKELAEKVKETVGFEGELRFDTSKPDGT----------------PRKLVDVSKL 282
Query: 354 --LGWRSTTNLPEDLKERFEEYVKIGRD 379
LGW +TT+L E LK+ +E +++ ++
Sbjct: 283 NSLGWEATTSLDEGLKKAYEWFLQTEKE 310
>gi|323703554|ref|ZP_08115199.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum nigrificans
DSM 574]
gi|323531457|gb|EGB21351.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum nigrificans
DSM 574]
Length = 309
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 16/144 (11%)
Query: 228 FRPQYMIGSGNNKDCEEWFFDRIVRK----RPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
RP + G G N DC F +++R R + G G Q+ + +V D+ L A
Sbjct: 164 LRPTLVYGPGQNDDC---FMSQLIRSLLSGRHFSMTG-GEQYRDFVYVSDVVEALWQAAN 219
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 343
NP A IFN+ S ++ L +A++ A G P +++ K + K F +
Sbjct: 220 NPRALGG-IFNIGSGKSYPLREVARMIADFIGQPDDLL----KIGALPYNKEEQF---AY 271
Query: 344 YAEPRAAKDILGWRSTTNLPEDLK 367
+ +AK +L W+ L E +K
Sbjct: 272 CVDINSAKQVLNWQPKIMLREGIK 295
>gi|322368741|ref|ZP_08043308.1| NAD-dependent epimerase/dehydratase [Haladaptatus paucihalophilus
DX253]
gi|320551472|gb|EFW93119.1| NAD-dependent epimerase/dehydratase [Haladaptatus paucihalophilus
DX253]
Length = 315
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 88/218 (40%), Gaps = 34/218 (15%)
Query: 170 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN----- 224
V D A+ + + SSA +Y D P VE + +P + + ++K ++ ++
Sbjct: 112 VLDRARREDAR-VVLASSAAVYGHPDAVPVVESEHKRPTSPY-GIDKLTADQYARRFSDL 169
Query: 225 ----WASFRPQYMIGSGNNKDCE---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 277
+ R + G N + F D+ R + I G G Q + HV D+
Sbjct: 170 YGIETVTLRYFNVYGPRQNPEYSAVVRTFLDQARRGEDITIQGDGTQTRDFVHVDDVVQA 229
Query: 278 LTLAVENPEAASSN----IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 333
N AA+++ FN+ + +VT+ +A+ +IVH DP+ ID
Sbjct: 230 ------NCRAATTDRTGEAFNVGTGESVTIRELAETIRSVTDSSSDIVHTDPRPGDID-- 281
Query: 334 KAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 371
H A+ A+ LG+ T +L + L E E
Sbjct: 282 --------HSRADITKARTALGYEPTVSLSDGLAELVE 311
>gi|383640403|ref|ZP_09952809.1| reductase [Streptomyces chartreusis NRRL 12338]
Length = 329
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 105/273 (38%), Gaps = 36/273 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G + + LG G EVT+ G + + PP R G ++ G PA +
Sbjct: 3 GGTEFVGRAVVEAALGRGWEVTVFHRG-----RHEAPPGVRS----LLGDRSTPGGPAAL 53
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK------PADEPP 198
G +DVV+D AVR A ++++++SS +Y ++ P
Sbjct: 54 AEDPG--EWDVVVDTWSAAPRAVRDAAR-LLRGRARRYVYVSSCSVYAWPRSAGHGEDAP 110
Query: 199 HVEGDVVKPD---------AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
VEG + G + V E+ S R ++G N W+ R
Sbjct: 111 LVEGASADAEQTAYAQDKRGGELAVLDAFGEDRS--VLVRAGLILGPYENIGRLPWWLGR 168
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA-VTLDGMAK 308
+ R PV PG VRDL+ + A E S +NLVS + T+ +
Sbjct: 169 MARGGPVLAPGPRELALQYVDVRDLAEWVLHASER---ELSGPYNLVSPQGHTTMGELLD 225
Query: 309 LCAQAAGLPVEIVHYDPKA---AGIDAKKAFPF 338
CA+ G E+ +P+ AGI P
Sbjct: 226 TCARVTGGAAELRWTEPEVILRAGIQPWTELPV 258
>gi|388469694|ref|ZP_10143903.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas
synxantha BG33R]
gi|388006391|gb|EIK67657.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas
synxantha BG33R]
Length = 311
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 116/290 (40%), Gaps = 51/290 (17%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
KK VLI +GG IG +L LL G+ V ++ +N K+ NE V
Sbjct: 5 KKWVLI----TGGAGFIGSHLVDALLAGGYWVRVL----DNLSTGKRSNLPLDNERV--- 53
Query: 134 GKTVWGDPA---EVGNVVGGVTFDVVL--------------DNNGKNLDAVRPVADWAKS 176
+ + GD A EV + GVT V L + N V + +
Sbjct: 54 -ELLEGDVANAEEVARALVGVTAVVHLAAVASVQASVDDPVSTHQSNFVGTLNVCEGMRK 112
Query: 177 SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS 236
+GVK+ +F SSA +Y E ++ K +K E + ++ +R Q+ +
Sbjct: 113 AGVKRVVFASSAAVYGNNGEGASIDEQTAKAPLTPYASDKLAGEYYFDF--YRRQHGLEP 170
Query: 237 ---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
G +D F +R R P+ + G G Q + +V DL ++L
Sbjct: 171 VIFRFFNIFGPRQDPSSPYSGVISIFSERAQRGLPITVYGDGEQTRDFMYVEDLVNVLVQ 230
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
AVE P+A I N+ R TL + + +A G LP V Y+ +G
Sbjct: 231 AVEVPDAPLGAI-NVGWSRTTTLRQVLQALEEALGSLPA--VTYEAARSG 277
>gi|329120909|ref|ZP_08249541.1| UDP-glucose 4-epimerase [Dialister micraerophilus DSM 19965]
gi|327471368|gb|EGF16819.1| UDP-glucose 4-epimerase [Dialister micraerophilus DSM 19965]
Length = 306
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 103/274 (37%), Gaps = 52/274 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFN-----EIVSAGGKTVW 138
+GG IG +LA L+ H VTI+ D + +FN E + A +T
Sbjct: 6 TGGAGFIGSHLADALIKLNHNVTII-------DNLSSGT--KFNVPSEAEFIEADIRT-- 54
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQF 182
+ + N+ FD+V + N+ + V + + +GVK+
Sbjct: 55 ---SSIANIFKNHKFDLVFHEAAQTLVPESIKNPYKDADENIMGLINVLESCRQTGVKKI 111
Query: 183 LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN--WASFRPQYMI------ 234
+F SSA +Y P E + + P + + + K SE + N + F Y I
Sbjct: 112 IFSSSAAVYGNNSNLPLSENESLSPTSFY-GLTKTTSEKYLNLYYEYFGIHYTILRYSNV 170
Query: 235 -----GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
G+ F + +P+ I G G Q + V D+ A+ N +
Sbjct: 171 YGPRQGANGEGGVIYIFAKALAENKPINIFGDGNQTRDFISVHDIVEANIAAITN---GN 227
Query: 290 SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY 323
I N+ ++ TL+ +A + ++HY
Sbjct: 228 EKILNISTETETTLNELANKMINLSKKDKNLIHY 261
>gi|404366465|ref|ZP_10971848.1| hypothetical protein FUAG_01665 [Fusobacterium ulcerans ATCC 49185]
gi|404288992|gb|EFS26150.2| hypothetical protein FUAG_01665 [Fusobacterium ulcerans ATCC 49185]
Length = 319
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 99/239 (41%), Gaps = 32/239 (13%)
Query: 148 VGGV--TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV 205
+GGV + + L+ N+ + + K+ G+K+F+ SS+ +Y + P E D+V
Sbjct: 86 LGGVRPSLEKPLEYEAVNVRGTMNLLESCKNLGIKKFIQASSSSVYGNNKKAPFKETDIV 145
Query: 206 K----PDA---------GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
P A GHV + Y + F R + G D + F +++
Sbjct: 146 DFAISPYAATKKSCEVMGHVYHKLYGIDMF----QLRFFTVYGERQRPDLAIYKFTKMIM 201
Query: 253 K-RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS--NIFNLVSDRAVTLDGMAKL 309
+ R +P G G F + +++D+ + +++ E S+ I NL V+L M
Sbjct: 202 EGREIPFYGEGNTFRDYTYIKDIVQGIKKSIDYLENNSNIYEILNLGESNTVSLKEMVTT 261
Query: 310 CAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 368
+ +I + +D YA+ R A++++G+ TT + +++
Sbjct: 262 IENVLEIKAKINKLPIQMGDVDKT----------YADIRKARELIGYNPTTEFEDGIRK 310
>gi|451818795|ref|YP_007454996.1| nucleoside-diphosphate-sugar epimerase [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451784774|gb|AGF55742.1| nucleoside-diphosphate-sugar epimerase [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 276
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 222
N+ A + ++++ +GVKQF++IS+ G+Y + P E + P G + KY SE
Sbjct: 83 NVGATLELLEYSRKTGVKQFIYISTGGVY-GFESNPFKEEEQCNP-HGIYSLSKYFSEKL 140
Query: 223 SNWASFRPQYMI-------GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS 275
+ + I G G +I++ V + GM N ++ DL
Sbjct: 141 CMEYQNKIKITIIRVFFPYGKGQKGRLISNLIHKILKGEKVILNNEGMPLINPINIVDLC 200
Query: 276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL 316
+++ V E IFN D V++ + + + G+
Sbjct: 201 NLINGVV---EKRLEGIFNACGDEIVSIKELCQRISDKFGI 238
>gi|322389546|ref|ZP_08063096.1| NAD-dependent epimerase/dehydratase [Streptococcus parasanguinis
ATCC 903]
gi|321143740|gb|EFX39168.1| NAD-dependent epimerase/dehydratase [Streptococcus parasanguinis
ATCC 903]
Length = 325
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 108/272 (39%), Gaps = 45/272 (16%)
Query: 111 GDENSDKMKKPPFNRFNEIVSAGG-KTVWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAV 167
GD +S + + F + +V AG T WG NVVG
Sbjct: 50 GDLSSIEEVRQAFQSVDAVVHAGALSTAWGPWKAFYQANVVG-----------------T 92
Query: 168 RPVADWAKSSGVKQFLFISSAGIYKPA-DEPPHVEGDVVKPDAGHVQ---VEKYISEN-F 222
+ V + + VK+ +++SS IY D+ +E D P H+ K SE F
Sbjct: 93 KNVLELCREYAVKRLVYVSSPSIYAAGKDQLNIMESDA--PKENHLNNYIRSKLASEKLF 150
Query: 223 SNWAS-----FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 277
S++ RP+ + G G+ R+ RK +P+ G Q ++ V +++
Sbjct: 151 SDYPDVPSIILRPRGLFGVGDTSILPRVL--RLSRKIGIPLIRGGEQLMDMTCVENVALA 208
Query: 278 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP 337
+ LA+E E A ++N+ + T + + + G P + Y AG+ A A+
Sbjct: 209 IRLALEAKE-AHGQVYNITNGEPKTFKYLIETTLKGLGEP---IRYRKIPAGLVAGAAYS 264
Query: 338 ----FRNMHFYAEP---RAAKDILGWRSTTNL 362
+R H EP R +L + T ++
Sbjct: 265 LEGVYRLFHLKTEPPLTRYTYYLLRYSQTLDI 296
>gi|322370410|ref|ZP_08044969.1| hypothetical protein ZOD2009_13007 [Haladaptatus paucihalophilus
DX253]
gi|320550118|gb|EFW91773.1| hypothetical protein ZOD2009_13007 [Haladaptatus paucihalophilus
DX253]
Length = 310
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 116/281 (41%), Gaps = 42/281 (14%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
+VLIV GG +G L +EL G GH+VT+++ +SD + G +
Sbjct: 2 RVLIV----GGSGFVGTALTEELHGRGHDVTVLSRSPRDSD-------------LPTGVE 44
Query: 136 TVWGDPAEVGNVVGGVTF-DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
TV GD + ++ G + D V+ NL A+ P+ + + + + + A
Sbjct: 45 TVSGDVTDYESIEGAFSGRDAVV-----NLVALSPLFKPPSGASHESVHLGGTENVVRAA 99
Query: 195 DE---PPHVEGDVVKPDAGHV--------QVEKYISENFSNWASFRPQYMIGSGNNKDCE 243
+E P V+ + D G + E+ + ++ W RP + G G E
Sbjct: 100 EEHGVPKLVQMSALGADPGGTTAYIRAKGEAEEVVRDSSLEWVIVRPSVVFGDGG----E 155
Query: 244 EWFFDRIVRKRPVP-IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
F +++ V +PG G V DL+ +L VE+ +A ++L +T
Sbjct: 156 FVSFTKVLTTPYVTGLPGGGKTRFQPIWVGDLAPILADCVED-DARLGRAYDLGGPEVLT 214
Query: 303 LDGMAKLCAQAAGLPVEIVHYDPKAAGID--AKKAFPFRNM 341
L +AKL +A G V ++ AGI A PF M
Sbjct: 215 LADVAKLAYRADGKSVAVLPIPMPLAGIGLTVADAIPFVPM 255
>gi|258514597|ref|YP_003190819.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum acetoxidans
DSM 771]
gi|257778302|gb|ACV62196.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum acetoxidans
DSM 771]
Length = 301
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 63/142 (44%), Gaps = 26/142 (18%)
Query: 148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP 207
+G TF+++ N++ R + + A++SGV QFL +S+ G D P V K
Sbjct: 77 IGEDTFELI------NVEGTRNLVEAAENSGVSQFLHLSALG---ACDNP------VYKY 121
Query: 208 DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRI---VRKRP--VPIPGSG 262
Q E+++ + NW RP + G G F DR+ V P VP+PG G
Sbjct: 122 AYSKWQGEEFVKNSKLNWVILRPSVIYGEGFG------FMDRMLQSVNMTPPWVPVPGRG 175
Query: 263 MQFTNIAHVRDLSSMLTLAVEN 284
V DL + + A+ N
Sbjct: 176 KTLFQPISVHDLVNCIIKALIN 197
>gi|150399165|ref|YP_001322932.1| NAD-dependent epimerase/dehydratase [Methanococcus vannielii SB]
gi|150011868|gb|ABR54320.1| NAD-dependent epimerase/dehydratase [Methanococcus vannielii SB]
Length = 319
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 170 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV-KPDAGHVQVEKY---ISENFSN- 224
+ + AK G+K+ +F SS+ +Y ++ P +E D V KP + + +KY I+ +++
Sbjct: 111 IFELAKKYGIKRVIFASSSSVYGGNEKTPFLESDNVDKPVSLYAATKKYNELIAHVYNHL 170
Query: 225 ----WASFRPQYMIGSGNNKDCEEWFFDR-IVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 279
R + G D W F + I+ ++P+ + G + ++ D+ +
Sbjct: 171 YGIEMIGLRFFTVYGEFGRPDMAYWKFTKNILEEKPIDVYNYGKMKRDFTYISDIVEGIK 230
Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG 315
AV + IFNL D + L+ M L + G
Sbjct: 231 SAVFLSKKIDYEIFNLGGDNPIELEYMISLIEKETG 266
>gi|78044276|ref|YP_359903.1| hypothetical protein CHY_1057 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77996391|gb|ABB15290.1| conserved domain protein [Carboxydothermus hydrogenoformans Z-2901]
Length = 313
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 130/320 (40%), Gaps = 53/320 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG ++ + L+ G EV ++ D + +E++ + GD +
Sbjct: 7 TGGAGFIGSHIVERLVRDGAEVVVL-------DDLSSGKEENLSEVLDKI-TFIKGDVRD 58
Query: 144 VGNVVGGVTFDVV------------------LDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
+ +++ G+T DV L + N+ V AK +GVK+ ++
Sbjct: 59 L-DLIKGITKDVDYILHEAAMASVPASIDDPLKCHEVNVTGTINVLLSAKENGVKRVVYA 117
Query: 186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW---------ASFRPQYMIGS 236
+S+ +Y + P E +P + + V KY E + R + G
Sbjct: 118 ASSAVYGNNETLPKKEDMYPEPLSPY-AVSKYAGELYLQVFARIYGIEAVGLRYFNVFGP 176
Query: 237 GNNKDCEEW-----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ + + F D +++ P I G GMQ + + D+ LA+ AS
Sbjct: 177 KQDPNSQYAAVIPKFIDALLKGMPPTIYGDGMQTRDFIFIDDVVEANMLAL-TARGASGK 235
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAK 351
+FN+ ++L+ + K+ + G+ +E V+ + + D + + A+ A+
Sbjct: 236 VFNIACGERISLNRLYKVIKEIIGVDIEPVYAEARVG--DVRDSL--------ADISLAR 285
Query: 352 DILGWRSTTNLPEDLKERFE 371
+ILG+ +L E LK+ E
Sbjct: 286 NILGFEPKVSLEEGLKKTVE 305
>gi|403252244|ref|ZP_10918554.1| UDP-glucose 4-epimerase [Thermotoga sp. EMP]
gi|402812257|gb|EJX26736.1| UDP-glucose 4-epimerase [Thermotoga sp. EMP]
Length = 309
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 27/212 (12%)
Query: 178 GVKQFLFISSAG-IY--------KPADEPPH-VEGDVVKPDAGHVQVEKYISENFSNWAS 227
GVK+F+F S+ G IY P E PH + + + + +E + E +
Sbjct: 108 GVKKFIFSSTGGAIYGENVKVFPTPETEIPHPISPYGIAKYSTEMYLEFFAREYGLKYTV 167
Query: 228 FRPQYMIGSGNNKDCEE----WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
R + G + E F +R++R V I G G + +V D+ LA+E
Sbjct: 168 LRYANVYGPRQDPYGEAGVVAIFTERMLRGEEVHIFGDGEYVRDYVYVDDVVRANLLAME 227
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 343
+ +FN+ + R T++ + K+ + G E V+ P+ D +K+
Sbjct: 228 K---GDNEVFNIGTGRGTTVNQLFKMLKEITGYDKEPVYKPPRKG--DVRKSI------- 275
Query: 344 YAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
+ AK+ LGW +L E LK E + K
Sbjct: 276 -LDYTKAKEKLGWEPKVSLEEGLKLTVEYFRK 306
>gi|424895811|ref|ZP_18319385.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393180038|gb|EJC80077.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 326
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 103/262 (39%), Gaps = 39/262 (14%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVL + GG I + + + +GH V++ G ++ IV G
Sbjct: 4 KVLFI----GGTGQISYPCVERAIAAGHHVSVFNRGLRSAALPAG-----VTSIVGELGS 54
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
+ + D A+ V D G++++ S Q++FISSA +Y +
Sbjct: 55 SAYADLAKANCDVVCQFIAFTPDQVGRDIEVF--------SGHCGQYIFISSASVY---E 103
Query: 196 EPPH-----VEGDVVKPDAGHVQVEKYISENFS-----NWASFRPQYMIGSG-----NNK 240
+PP E + P + Q + E W RP + + +G +
Sbjct: 104 KPPRHYVITEETPAINPYWPYSQAKIACEELLQKSGNLGWTIVRPSHTVRTGLPIMMGDA 163
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
D R++ P+ + G G + DL+ + + +AA + IF++ SDRA
Sbjct: 164 DV---MARRMLDGEPIIVAGDGHTPWTLTRSVDLAVPF-VGLFGKQAALNEIFHITSDRA 219
Query: 301 VTLDGMAKLCAQAAGLPVEIVH 322
T D + K A+ G+ +IVH
Sbjct: 220 HTWDDIQKTIARLLGVEAKIVH 241
>gi|229122755|ref|ZP_04251964.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
95/8201]
gi|228660619|gb|EEL16250.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
95/8201]
Length = 306
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + ++ G+K+ + +S+ IY DE +V + PD H KY++E
Sbjct: 66 NVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAE 125
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 126 QAIDQAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 183
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D + L
Sbjct: 184 NVVDALLLCMHSPKHTLGQKYNITNDERINL 214
>gi|312898930|ref|ZP_07758318.1| NAD-binding domain 4 [Megasphaera micronuciformis F0359]
gi|310620092|gb|EFQ03664.1| NAD-binding domain 4 [Megasphaera micronuciformis F0359]
Length = 310
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 100/231 (43%), Gaps = 26/231 (11%)
Query: 158 DNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY 217
+++ +N+ + V + A+ +GVK+ +F SSA +Y D P E + + P + + + K
Sbjct: 88 EDSDENVMGLLSVLEGARKTGVKKVVFSSSAAVYGDNDNLPLKEDEPLTPTSFY-GLSKV 146
Query: 218 ISENFSN--WASFRPQYMIGSGNNKDCEEW-----------FFDRIVRKRPVPIPGSGMQ 264
ISE + + F Y++ N E F + + I G G Q
Sbjct: 147 ISERYLEMYYKVFGLPYVVLRYANVYGERQGVHGEGGVVFVFAHALTHGEDLTIYGDGEQ 206
Query: 265 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
+ +V+D+++ A+++ I+N+ + T++ + ++ +G+ + VHY+
Sbjct: 207 TRDFVYVKDVAAANVAALQDE--VKPGIYNISTTIETTVNALKEILFHLSGIRKD-VHYE 263
Query: 325 PKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
+ G + A + AK+ L WR + L +E +V+
Sbjct: 264 DERTGDIVRSAL---------DNHKAKEFLKWRPKEKIISGLASTYEYFVQ 305
>gi|283778335|ref|YP_003369090.1| NAD-dependent epimerase/dehydratase [Pirellula staleyi DSM 6068]
gi|283436788|gb|ADB15230.1| NAD-dependent epimerase/dehydratase [Pirellula staleyi DSM 6068]
Length = 328
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 31/175 (17%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE----GDVVKP----------- 207
N++A + + A+ V+QFLF SS+ +Y P E G+ V P
Sbjct: 105 NIEATLVLLELARQHRVEQFLFASSSTVYGSGAAAPFAEDAPMGNPVSPYGVSKRAAEQL 164
Query: 208 --DAGHVQVEKYISENFSN--WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM 263
+ H+ ++S F N RP+ + + F I+R P+ + G G
Sbjct: 165 GFNYHHLYQIPFVSLRFFNAYGIRIRPELALAA---------FTRAILRGEPLKLFGDGS 215
Query: 264 QFTNIAHVRDLSSMLTLAVENPE---AASSNIFNLVSDRAVTLDGMAKLCAQAAG 315
+ HV D++ L +E+P A + FNL S +T+ + + AAG
Sbjct: 216 ALRDFTHVTDIAQGLLQTLEHPHFATAVAGEAFNLGSCAPITVRQLIDMIEAAAG 270
>gi|298385502|ref|ZP_06995060.1| mRNA-binding protein [Bacteroides sp. 1_1_14]
gi|298261643|gb|EFI04509.1| mRNA-binding protein [Bacteroides sp. 1_1_14]
Length = 338
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 68/163 (41%), Gaps = 23/163 (14%)
Query: 179 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 227
KQ++FISSA Y KP + P+ + K A V + Y + F
Sbjct: 88 TKQYIFISSASAYQKPLADYRITESTPLVNPYWQYSRHKIAAEEVLMTAYRTSGFPI-TI 146
Query: 228 FRPQYMIGS--------GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 279
RP + GN + + RI+ +PV IPG G + H +D +
Sbjct: 147 VRPSHTYNGTKPPVSLHGNKGNWQ--ILKRILDGKPVIIPGDGSSLWTLTHSKDFAKGYV 204
Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
+ NP A N F++ +D ++T + + + A A G P+ +H
Sbjct: 205 GLMANPHAI-GNAFHITTDESMTWNQIYQTIADALGKPLNALH 246
>gi|226366203|ref|YP_002783986.1| UDP-glucose 4-epimerase [Rhodococcus opacus B4]
gi|226244693|dbj|BAH55041.1| UDP-glucose 4-epimerase [Rhodococcus opacus B4]
Length = 330
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 133/345 (38%), Gaps = 65/345 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G + LL GHEV + + D ++ P G + + GD E
Sbjct: 6 TGGAGYVGSVCSTVLLERGHEVVV--IDDLSTGNADAVPL---------GAEFIDGDVGE 54
Query: 144 VGNVVGGVT----FDVVLDNNGKNL--DAVR-PVADW-------------AKSSGVKQFL 183
V V G + FD VL ++L ++V+ P W + SG ++ +
Sbjct: 55 VAADVLGTSGTPRFDGVLHFAAQSLVGESVQYPEKYWRGNVVTTLELLEAMRHSGTQKLV 114
Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIG 235
F S+A Y + P E D +P + + I ++++ S R + G
Sbjct: 115 FSSTAATYGEPEHSPITEADPTRPTNPYGATKLAIDHAITSYSVAHSLAATSLRYFNVAG 174
Query: 236 S----GNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTL 280
+ G N+ E +++ + + I G+ G + HV DL+ L
Sbjct: 175 AYKSAGENRVVETHLIPLVLQVALGQREKISIFGTDWPTPDGTAIRDYIHVLDLAEAHVL 234
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRN 340
A+E+ I+NL S ++ + CA+ GLP+ V P+ AG A
Sbjct: 235 ALESSIEGRHRIYNLGSGAGFSVREVISACARVTGLPIA-VEDAPRRAGDPAV------- 286
Query: 341 MHFYAEPRAAKDILGWR-STTNLPEDLKERFEEYVKIGRDKKAMQ 384
A A LGWR T+L E + + + ++G A +
Sbjct: 287 --LVASSDRAIAELGWRPEHTDLDEIVADAWTYLQELGDRSHAAR 329
>gi|17568069|ref|NP_508390.1| Protein F53B1.4 [Caenorhabditis elegans]
gi|351061071|emb|CCD68828.1| Protein F53B1.4 [Caenorhabditis elegans]
Length = 342
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 86/211 (40%), Gaps = 17/211 (8%)
Query: 178 GVKQFLFISSAGIYKPA--DEPPHVEGDVVKPDAGHVQVEKYISENF--SNWASFRPQYM 233
GVK+ + IS+ +Y + D P E + K E S W S++ Y+
Sbjct: 128 GVKKLVHISTDEVYGDSFEDTTPKSESASLPNPTNPYAASKAACEMVIRSYWHSYKLPYV 187
Query: 234 IGSGNNKDCEEWFFDRIVRK--------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
+ NN +++ K +P P+ G G+ + +V D S +T
Sbjct: 188 MVRMNNVYGPRQIHTKLIPKFTKLALDGKPYPLMGDGLHTRSWMYVEDCSEAITRVAL-- 245
Query: 286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 345
E I+N+ +D +T + K+ ++++ +P A P+ + +Y
Sbjct: 246 EGTLGEIYNIGTDFEMTNIELTKMIHFTVS---KLLNREPTAPTFAPIPDRPYHDRRYYI 302
Query: 346 EPRAAKDILGWRSTTNLPEDLKERFEEYVKI 376
+ ++ +GW+ TT E L + + YVK+
Sbjct: 303 DFSKIRNAMGWQCTTPFSEGLMKTIDYYVKL 333
>gi|19553125|ref|NP_601127.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum ATCC 13032]
gi|62390761|ref|YP_226163.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum ATCC 13032]
gi|21903430|sp|Q45291.2|GALE_CORGL RecName: Full=UDP-glucose 4-epimerase; AltName:
Full=Galactowaldenase; AltName: Full=UDP-galactose
4-epimerase
gi|21324691|dbj|BAB99314.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum ATCC 13032]
gi|41326099|emb|CAF20262.1| UDP-GLUCOSE 4-EPIMERASE [Corynebacterium glutamicum ATCC 13032]
gi|385144027|emb|CCH25066.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum K051]
Length = 329
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 118/322 (36%), Gaps = 79/322 (24%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTI-----------------MTVGDENSDKMKKPPFNRF 126
+GG +G A LL GH+VTI + GD N + F
Sbjct: 6 TGGAGYVGSVAAAVLLEHGHDVTIIDNFSTGNREAVPADARLIEGDVNDVVEEVLSEGGF 65
Query: 127 NEIVSAGGKTVWGDPAEV------GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK 180
+V +++ G+ E NVV +T LDA+R + GV
Sbjct: 66 EGVVHFAARSLVGESVEKPNEYWHDNVVTALTL----------LDAMR-------AHGVN 108
Query: 181 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQY 232
+F S+A Y D P E +P + + I +++A S R
Sbjct: 109 NLVFSSTAATYGEPDVVPITEDMPTQPTNAYGATKLSIDYAITSYAAAFGLAATSLRYFN 168
Query: 233 MIGS----GNNKDCEEWFFDRIV------RKRPV------PIPGSGMQFTNIAHVRDLSS 276
+ G+ G N++ E ++ R++ P P G + H+ DL+
Sbjct: 169 VAGAYGNIGENREVETHLIPLVLQVATGHREKTFMFGDDWPTP-DGTAVRDYIHILDLAK 227
Query: 277 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG--LPVEIVHYDPKAAGIDAKK 334
LA+E+ EA IFNL S ++ + ++C + G +P E+ P+ AG A
Sbjct: 228 AHVLALESNEAGKHRIFNLGSGDGYSVKQVVEMCREVTGHPIPAEVA---PRRAGDPAT- 283
Query: 335 AFPFRNMHFYAEPRAAKDILGW 356
A AK LGW
Sbjct: 284 --------LIASSEKAKQELGW 297
>gi|393199081|ref|YP_006460923.1| nucleoside-diphosphate-sugar epimerase [Solibacillus silvestris
StLB046]
gi|327438412|dbj|BAK14777.1| nucleoside-diphosphate-sugar epimerase [Solibacillus silvestris
StLB046]
Length = 295
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 59/129 (45%), Gaps = 16/129 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KK+L++ GG G L + LL HEVTI+T G M + PF E +
Sbjct: 2 KKILVL----GGTRFFGRKLVELLLEQKHEVTIVTRG------MSENPFGDAVEHIKVDR 51
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
K D G V+ TFD+V DN + + + + D + + +F S+ +Y+ A
Sbjct: 52 K----DTEAFGKVLENRTFDIVYDNICYSPNEAKQLCDLFNGK-IGKLVFTSTLAVYE-A 105
Query: 195 DEPPHVEGD 203
D PH E D
Sbjct: 106 DGKPHSEED 114
>gi|385807699|ref|YP_005844096.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 267]
gi|383805092|gb|AFH52171.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 267]
Length = 327
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 129/338 (38%), Gaps = 66/338 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G A LL GHEVTI+ D S K E V AG + GD +
Sbjct: 6 TGGAGYVGSVCAAVLLEQGHEVTIV---DNFSTGNK--------EAVPAGATLMEGDIRD 54
Query: 144 -VGNVVGGVTFDVVLDNNGKNL---DAVRPVADWA-------------KSSGVKQFLFIS 186
G V+ ++D VL ++L +P W +++ V +F S
Sbjct: 55 KAGEVLASDSYDAVLHFAARSLVGESVEKPSEYWQHNFVTTLALLDAMRANKVTNLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIGS-- 236
+A Y P E +P + + I +++A S R + G+
Sbjct: 115 TAATYGEPASVPITEDFPTQPTNPYGATKLAIDHAITSYAQAYGLSATSLRYFNVAGAYG 174
Query: 237 --GNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVE 283
G N++ E I++ + + I G G + H+RDL+ LA+E
Sbjct: 175 SIGENREVETHLIPLILQVALGHRDKILIFGDDWPTEDGTAVRDYIHIRDLADAHVLAME 234
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG--LPVEIVHYDPKAAGIDAKKAFPFRNM 341
+ + IFNL S ++ + K C G +P E+ P+ AG A
Sbjct: 235 SNKPGIHRIFNLGSGEGFSVKQVIKACRDVTGHPIPAEVA---PRRAGDPAV-------- 283
Query: 342 HFYAEPRAAKDILGWRST-TNLPEDLKERFEEYVKIGR 378
A A+ LGW T T+L +++ + K+G
Sbjct: 284 -LIASSAKAQSELGWNPTRTDLSTIVEDAWSFTSKLGE 320
>gi|380695552|ref|ZP_09860411.1| mRNA-binding protein [Bacteroides faecis MAJ27]
Length = 338
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 23/163 (14%)
Query: 179 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 227
KQ++FISSA Y KP + P+ + K A V + Y + F
Sbjct: 88 TKQYIFISSASAYQKPLADYRITESTPLVNPYWQYSRHKIAAEEVLMAAYRTTGFPV-TI 146
Query: 228 FRPQYMIGS--------GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 279
RP + GNN + + RI+ +PV IPG G + H RD +
Sbjct: 147 VRPSHTYNGTKPPVSLHGNNGNWQ--ILKRILDGKPVIIPGDGSSLWTLTHSRDFAKGYV 204
Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
+ NP A N F++ +D ++T + + + A A P+ +H
Sbjct: 205 GLMANPHAI-GNAFHITTDESMTWNQIYQTIADALEKPLNALH 246
>gi|440685361|ref|YP_007160153.1| UDP-glucose 4-epimerase [Anabaena cylindrica PCC 7122]
gi|428682621|gb|AFZ61383.1| UDP-glucose 4-epimerase [Anabaena cylindrica PCC 7122]
Length = 317
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 9/130 (6%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F DR K+P+ I G G V DL+ LA++ + A++ ++NL R VTL
Sbjct: 180 FLDRAFTKQPLTIFGDGSASRKFVFVEDLAQAHVLALQ--DIAANQVYNLEGMRFVTLKE 237
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
+A+L ++ I YDP G N A LGW+ +L E
Sbjct: 238 LAELVSKLVDEVDIIYQYDPSRRG-------ELDNYRKIISANKAYIELGWQPHIDLEEG 290
Query: 366 LKERFEEYVK 375
++ Y K
Sbjct: 291 VRRTINWYQK 300
>gi|391231675|ref|ZP_10267881.1| nucleoside-diphosphate-sugar epimerase [Opitutaceae bacterium TAV1]
gi|391221336|gb|EIP99756.1| nucleoside-diphosphate-sugar epimerase [Opitutaceae bacterium TAV1]
Length = 317
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 111/286 (38%), Gaps = 47/286 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---D 140
+GG IG +L + LL +G EV ++ D + + + + G + V G D
Sbjct: 14 TGGAGFIGGHLVRTLLEAGTEVVVL-------DNFRTGSPDNLAGLPAPGVRLVRGCITD 66
Query: 141 PAEVGNVVGGV--------------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
A V + V G + + + + N+ + V + A ++G ++ + S
Sbjct: 67 RATVRDAVQGCDAVFHLAALVSVPESMERIHECVTLNVTGLLTVLEEAAAAGARKLVLSS 126
Query: 187 SAGIY------------KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI 234
SA IY +PA + P+ + K D G + + AS R +
Sbjct: 127 SAAIYGDDPEVPKREDMRPAPKSPYA---ITKLD-GEYYCALFAAAGRIETASLRYFNVF 182
Query: 235 GSGNNKDCEE-----WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
G N D F R + +PV I G G Q + +VRD+ + A A
Sbjct: 183 GPRQNPDSAYAAAVPIFIRRALAGQPVAIHGDGGQTRDFVYVRDVVAANLFAART--AGL 240
Query: 290 SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
+ +FN+ ++T+ +A+ G IVH P+ + +A
Sbjct: 241 TGVFNVGYGGSLTILELAQRIIAQTGSASRIVHEAPRPGDVRHSRA 286
>gi|329924722|ref|ZP_08279737.1| NAD dependent epimerase/dehydratase family protein [Paenibacillus
sp. HGF5]
gi|328940556|gb|EGG36878.1| NAD dependent epimerase/dehydratase family protein [Paenibacillus
sp. HGF5]
Length = 338
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 112/275 (40%), Gaps = 38/275 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG I + K+LL G E+ ++ G+ N D + + I+ A D +V
Sbjct: 7 GGTGTISTAITKQLLEQGCELYLLNRGNRN-DTLPEGA-----HILQADIH----DEDQV 56
Query: 145 GNVVGGVTFDVVLDNNGKNLDAVRPVA---DWAKSSG-VKQFLFISSAGIYK-PADEPPH 199
++ + FD V D A P D+ +G KQF+FISSA Y+ P +
Sbjct: 57 AKLIEHLDFDAVAD-----FIAFEPAHLERDYRLFAGKTKQFIFISSASAYQTPLSDYRI 111
Query: 200 VEGD-VVKPDAGH----VQVEKYISENFSNWA----SFRPQYM-----IGSGNNKDCEEW 245
EG + P + + E Y+ + + RP + I G + W
Sbjct: 112 TEGTPLSNPYWAYSRNKIACEDYLMKQYREHGFPVTIVRPSHTYDERSIPLGVHGSQGSW 171
Query: 246 -FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 304
R++ +PV I G G + H RD + + N A ++ ++ SD ++T +
Sbjct: 172 QVVKRMLENKPVLIHGDGTSLWTLTHNRDFAKGFIGLMGNIHAIGESV-HITSDESLTWN 230
Query: 305 GMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
+ ++ A A G+ + VH + +DA FR
Sbjct: 231 QIYEIIADALGVQLNAVHVSSEF--LDATSTQDFR 263
>gi|158318391|ref|YP_001510899.1| NAD-dependent epimerase/dehydratase [Frankia sp. EAN1pec]
gi|158113796|gb|ABW15993.1| NAD-dependent epimerase/dehydratase [Frankia sp. EAN1pec]
Length = 359
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 13/128 (10%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F V RP+ + G G+QF N +VRDL+ LA+ + +A++ L + V++
Sbjct: 220 FVHNAVHGRPLTVAGDGLQFRNYVYVRDLADAHVLALAD--SAANTTLALEGNEPVSVLE 277
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
MA+ + P + + P G FR A+ RAA +LGWR TT +
Sbjct: 278 MAQAVQRH--FPGTEIEHMPARPG-------DFRGREISAQ-RAAG-LLGWRPTTPFLDG 326
Query: 366 LKERFEEY 373
+++ E Y
Sbjct: 327 VRQYIEWY 334
>gi|448739571|ref|ZP_21721583.1| NAD-dependent epimerase/dehydratase [Halococcus thailandensis JCM
13552]
gi|445799190|gb|EMA49571.1| NAD-dependent epimerase/dehydratase [Halococcus thailandensis JCM
13552]
Length = 352
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 106/273 (38%), Gaps = 39/273 (14%)
Query: 67 VKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF 126
V A++ L++ GG IG + ELL SG+ VT+ G ++ PF
Sbjct: 21 VPATSGSGMNALVI----GGTRFIGRHTVTELLDSGYGVTVFNRGTHDN------PFGEH 70
Query: 127 NEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
E V G +T D V D V + G+ A+ D +++ IS
Sbjct: 71 VEHVE-GDRTERADLERAAERDPDVVVDCVAYHPGEVRTAIELFDD-------SRYVVIS 122
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQ---------------VEKYISENFSNWA---SF 228
S Y ++E P EG+ D Q +++ +S+ ++ S
Sbjct: 123 SGAAYG-SEEIPKREGETALHDCTAEQATDDSQETYGPRKAEIDRVVSDAAAHGVEAMSV 181
Query: 229 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
RP + G + + +++ DR+ V +PG G ++ V D++ L + E E
Sbjct: 182 RPPVVYGPHDYTERFDYWLDRVDNHDRVLVPGDGDCLRHLVFVEDVARALRIVAE--EGT 239
Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
+N+ R L +L A A V+IV
Sbjct: 240 PGAAYNVGDRRLPILSEWIELVADALDTEVDIV 272
>gi|443289722|ref|ZP_21028816.1| NAD-dependent epimerase/dehydratase [Micromonospora lupini str.
Lupac 08]
gi|385887337|emb|CCH16890.1| NAD-dependent epimerase/dehydratase [Micromonospora lupini str.
Lupac 08]
Length = 336
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 69/175 (39%), Gaps = 18/175 (10%)
Query: 179 VKQFLFISSAGIYKPADEP------PHVEGDVVKPDAGHVQV----EKYISENFSNWASF 228
V F+++SS +Y P P +GD D + Q+ E+ + E F N A
Sbjct: 88 VGHFVYVSSGSVYADPVAPGSDETAPVADGDPDAVDGDYQQLKAGAERAVREVFENRALI 147
Query: 229 -RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
R ++G G + W+ +RI R V PG VRDL+S + ++ E
Sbjct: 148 ARAGLILGPGEDIGRLPWWLNRIARGGDVLAPGPAELPIQCIDVRDLASWM---LDQGER 204
Query: 288 ASSNIFNLVSDRA-VTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPF 338
FN VS T+ + C G + DP+ AAG++ P
Sbjct: 205 GQGGTFNAVSRPGHSTMGELLDECVAVTGSDARLRWIDPESILAAGVEPWNELPI 259
>gi|170755592|ref|YP_001782294.1| NAD-dependent epimerase/dehydratase [Clostridium botulinum B1 str.
Okra]
gi|429246922|ref|ZP_19210208.1| NAD-dependent epimerase/dehydratase [Clostridium botulinum
CFSAN001628]
gi|169120804|gb|ACA44640.1| NAD-dependent epimerase/dehydratase family protein [Clostridium
botulinum B1 str. Okra]
gi|428756087|gb|EKX78672.1| NAD-dependent epimerase/dehydratase [Clostridium botulinum
CFSAN001628]
Length = 305
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 122/321 (38%), Gaps = 56/321 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA 142
+GG IG L + +G G++V I+ + N + + K N+I+ +
Sbjct: 6 TGGAGFIGSNLVDKFIGMGNDVCIIDNLSTGNINNVNKKARLYINDILDS---------- 55
Query: 143 EVGNVVGGVTFDVV-----------------LDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
+ N+ FD+V D+N N+ + GVK+ ++
Sbjct: 56 NIANIFKKEKFDIVYHFAAQIDVQKSIKDPMFDSN-VNICGTVNILKSCVDYGVKKIIYP 114
Query: 186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS---------NWASFRPQYMIGS 236
SSA +Y + P E VKP + + + KY E + ++ FR + G
Sbjct: 115 SSAAVYGQPEYLPIDEKHRVKPISSY-GLSKYTPEEYIRSFSELYNLDYTIFRYANVYGI 173
Query: 237 GNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ E F DR+ + P+ I G G + +V D+ + A+ N S N+
Sbjct: 174 RQDPKGEGGVVSIFMDRLFKNYPLCIFGDGKALRDYIYVEDVVNANIAALYN---GSRNL 230
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 352
FN+ + T+ +A++ + I + + + I+ HF E AK
Sbjct: 231 FNIGTGVYTTVKDLAQMMIDTMKVQSHIEYQEARKGDIEKS--------HFNIEK--AKV 280
Query: 353 ILGWRSTTNLPEDLKERFEEY 373
L W NL + L + Y
Sbjct: 281 ELKWEPKYNLQKGLIKTINYY 301
>gi|452960745|gb|EME66060.1| UDP-glucose 4-epimerase [Rhodococcus ruber BKS 20-38]
Length = 330
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 123/326 (37%), Gaps = 67/326 (20%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA 142
+GG +G + LL GHEV ++ + N+D V AG + V GD A
Sbjct: 6 TGGAGYVGSVCSTVLLEQGHEVVVLDDLSTGNADA------------VPAGVEFVEGDIA 53
Query: 143 EVGNVV----GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQF 182
V G FD VL + N+ A + D + SG +
Sbjct: 54 TAAAAVLGDGGRSRFDGVLHFAAQSLVGESVEQPDKYWHGNVVATLALLDAIRRSGTPRL 113
Query: 183 LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW------ASFRPQYM--- 233
+F S+A Y + P E +P + + I S++ A+ +Y
Sbjct: 114 VFSSTAATYGEPERVPITEDAPARPTNPYGATKLAIDHAISSYTRAYGLAATSLRYFNVA 173
Query: 234 ---IGSGNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLT 279
G+G N+ E +++ + + + G+ G + HV+DL+
Sbjct: 174 GAYRGAGENRVVETHLIPLVLQVALGQREHISVFGTDWPTKDGTAVRDYIHVKDLADAHL 233
Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
LA+E ++NL S T+ + + C + GLP+ +V P+ AG A
Sbjct: 234 LALEAARPGEHAVYNLGSGEGFTVREVIEACRRVTGLPITVVDA-PRRAGDPAV------ 286
Query: 340 NMHFYAEPRAAKDILGWR-STTNLPE 364
A R A + LGW+ T+L E
Sbjct: 287 ---LIASSRRAVEELGWKPQHTSLDE 309
>gi|373497608|ref|ZP_09588131.1| hypothetical protein HMPREF0402_02004 [Fusobacterium sp. 12_1B]
gi|371962973|gb|EHO80547.1| hypothetical protein HMPREF0402_02004 [Fusobacterium sp. 12_1B]
Length = 325
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 100/235 (42%), Gaps = 24/235 (10%)
Query: 148 VGGV--TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV 205
+GGV + + L+ N+ + + K+ G+K+F+ SS+ +Y + P E D+V
Sbjct: 92 LGGVRPSLEKPLEYEAVNVRGTMNLLESCKNLGIKKFIQASSSSVYGNNKKAPFKETDIV 151
Query: 206 K----PDAG---HVQVEKYISENFSNWASFRPQYMIGSGNNK--DCEEWFFDRIVRK-RP 255
P A +V ++ F+ ++ G+ + D + F +++ + R
Sbjct: 152 DFAISPYAATKKSCEVMGHVYHKLYGIDMFQLRFFTVYGDRQRPDLAIYKFTKMIMEGRE 211
Query: 256 VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS--NIFNLVSDRAVTLDGMAKLCAQA 313
+P G G F + +++D+ + +++ E S+ I NL V+L M
Sbjct: 212 IPFYGEGNTFRDYTYIKDIVQGIKKSIDYLENNSNVYEILNLGESNTVSLKEMVATIENV 271
Query: 314 AGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 368
+ +I + +D YA+ R A++++G+ TT + +++
Sbjct: 272 LEIKAKINKLPMQMGDVDKT----------YADIRKARELIGYNPTTEFEDGIRK 316
>gi|350568632|ref|ZP_08937030.1| UDP-glucose 4-epimerase [Propionibacterium avidum ATCC 25577]
gi|348660875|gb|EGY77571.1| UDP-glucose 4-epimerase [Propionibacterium avidum ATCC 25577]
Length = 367
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 125/342 (36%), Gaps = 77/342 (22%)
Query: 64 AFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT-------------- 109
T+ A+ K+LI +GG IG + +GHEV ++
Sbjct: 28 GLTITATRKVPMKILI----TGGAGYIGSTVGSACEEAGHEVVVLDDLSAGRREFVRDRT 83
Query: 110 --VGDENSDKMKKPPF--NRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNN-GKNL 164
GD + F N+ + +V K + P V + DNN GK +
Sbjct: 84 FYQGDIADQDLLDRVFTENQIDAVVHCAAKIIV--PESVDEPL------TYYDNNVGKTV 135
Query: 165 DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----------------D 208
++ + + +GV + LF SSA IY +E E + P D
Sbjct: 136 ALLKGM----ERNGVHRILFSSSASIYATDEEFKVTEQSALDPGSPYATTKFMVEFILRD 191
Query: 209 AGHVQVEKYISENFSNWASFRPQYMIGSGN-------NKDCEEWFFDRIVRKRPVPIP-- 259
A H K +S + N P+ G K + W D V P
Sbjct: 192 AAHASDLKALSLRYFNPIGSDPKLRTGQQIEHPTHVLGKMIDAWMEDSTFTVTGVEWPTR 251
Query: 260 -GSGMQFTNIAHVRDLSSMLTLAVENPEAASS----NIFNLVSDRAVTLDGMAKLCAQAA 314
GSG++ + HV DL+ A+E+ + ++ +FN+ + VT+ + K +
Sbjct: 252 DGSGIR--DFIHVWDLARAHVAALEHLDEVTTEDPYQVFNIGTGNGVTVKELVKAFEEGT 309
Query: 315 GLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW 356
G P+++V+ P+ + Y AKD+LGW
Sbjct: 310 GKPLDVVYGPPRPGDVAGA----------YTVSSRAKDLLGW 341
>gi|334120384|ref|ZP_08494465.1| UDP-glucuronate 4-epimerase [Microcoleus vaginatus FGP-2]
gi|333456731|gb|EGK85361.1| UDP-glucuronate 4-epimerase [Microcoleus vaginatus FGP-2]
Length = 316
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 35/256 (13%)
Query: 126 FNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLF 184
F++ AG + WGD +N+++ + + + AK + +++F++
Sbjct: 79 FHQAAQAGVRASWGDGFR--------------SYTERNINSTQVLLEAAKDAPRLQKFVY 124
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYISENFSNWA----SFRPQYMIGS 236
SS+ IY A+ P E +P + + + E+ + N+ S R + G
Sbjct: 125 ASSSSIYGNAESFPTTENACPQPVSPYGITKLAGERLCGLYYKNFGLPTTSLRYFTVYGP 184
Query: 237 GNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
D FF I+ + I G G+Q + + D + A E PEAA +FN+
Sbjct: 185 RQRPDMAFHKFFKSILFDEAISIFGDGLQTRDFTFISDCVAANLAAAEVPEAA-GEVFNI 243
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILG 355
V L + + P+ I +AA DA+ H A+ AK ILG
Sbjct: 244 GGGSRVVLKEVIDTIERIVDRPIRIDF--TEAARGDAR--------HTSADVSKAKKILG 293
Query: 356 WRSTTNLPEDLKERFE 371
++ L E L+ +E
Sbjct: 294 YQPQVALEEGLRREWE 309
>gi|288939982|ref|YP_003442222.1| NAD-dependent epimerase/dehydratase [Allochromatium vinosum DSM
180]
gi|288895354|gb|ADC61190.1| NAD-dependent epimerase/dehydratase [Allochromatium vinosum DSM
180]
Length = 328
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 90/217 (41%), Gaps = 30/217 (13%)
Query: 174 AKSSGVKQFLFISS---AGIYKP---ADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA- 226
A+ +GVK+F+F SS AG +P + PPH V A + E Y S + +
Sbjct: 125 ARLNGVKRFIFASSGAPAGEVEPPIHEELPPH---PVSPYGASKLAGEGYCSAYYRTFGI 181
Query: 227 -----SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
F Y S F + ++ P I G G Q + ++ DL + LA
Sbjct: 182 ETICLRFGNVYGPRSKKKSSVVAKFIRQALQGEPCIIYGDGTQTRDFLYIDDLVRAVMLA 241
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA---GLPVEIVHYDPKAAGIDAKKAFPF 338
+E P + F + + T+ +A L A+A G ++I H P+ D ++ F
Sbjct: 242 MEQPVGGET--FQIATGMERTVGEVATLLAKALEKRGTHMDIQHDSPRLG--DVRRNF-- 295
Query: 339 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
++ A +L WR+ +PE ++ + + +
Sbjct: 296 ------SDTSKAARLLEWRTEVEVPEGIERTLDWFFE 326
>gi|358465325|ref|ZP_09175275.1| NAD dependent epimerase/dehydratase family protein [Streptococcus
sp. oral taxon 058 str. F0407]
gi|357065820|gb|EHI75995.1| NAD dependent epimerase/dehydratase family protein [Streptococcus
sp. oral taxon 058 str. F0407]
Length = 326
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 140/351 (39%), Gaps = 77/351 (21%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGD--ENS-------DKMKKP 121
KKVL+ +G +G Y+ +EL G++V VG ENS D K+
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQHGYQVRAFGRNRKVGQSLENSLVVFFQGDLTKQE 57
Query: 122 PFNR----FNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
+ + +V AG TVWG P E D N+ + V + +
Sbjct: 58 DLTQACQGMDMVVHAGALSTVWG-PWE--------------DFYQTNVLGTKYVLEACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P ++ E D + + + YI ++ F
Sbjct: 103 AGMQRLVYVSSPSIYAAPRNQLAIKESDAPQEN----NLNNYIRSKLASEKLFKDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 159 SIVLRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAFPFRNMHF 343
P+ AS ++N+ + + + + G P+ P + I + F ++ +
Sbjct: 217 PQ-ASGQVYNITNGEPRAFKDLIEETLRGLGYPITYRRVPAPLLSVIASSLEFLYKTLKL 275
Query: 344 YAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 375
EP +A +D L +R ++ E +++ ++Y K
Sbjct: 276 KGEPALTRYTYYLLRYSQTLDISKAERD-LSYRPQISISEGIEQYVQDYRK 325
>gi|448607598|ref|ZP_21659551.1| nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase)
[Haloferax sulfurifontis ATCC BAA-897]
gi|445737535|gb|ELZ89067.1| nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase)
[Haloferax sulfurifontis ATCC BAA-897]
Length = 239
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Query: 255 PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA 314
P PI G G Q N +V+D++ L LA EN ++ N R VT++ ++
Sbjct: 112 PFPIWGDGEQTRNFTYVKDITKALRLASENITDGTA--VNAGISRYVTMNEAVEIIFDYL 169
Query: 315 GL-PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 373
G P EI + K G+ H A+ A+++LGW + E +K + Y
Sbjct: 170 GWEPDEIDYLTDKPQGV----------RHRAADTSRAEELLGWEPEYTVEEGIKNTLDWY 219
Query: 374 VKIGRDKKAMQ 384
V+ RDK+ ++
Sbjct: 220 VE-ARDKEYVK 229
>gi|269837187|ref|YP_003319415.1| NAD-dependent epimerase/dehydratase [Sphaerobacter thermophilus DSM
20745]
gi|269786450|gb|ACZ38593.1| NAD-dependent epimerase/dehydratase [Sphaerobacter thermophilus DSM
20745]
Length = 319
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F R +R P+PI G G Q ++ +V DL L LA+E E A + NL + T+
Sbjct: 189 FIMRALRGEPLPIFGDGSQTRSLCYVSDLVRGLILAMERDE-ARGQVINLGNPDERTVLE 247
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
+A++ P E+ + + D ++ P + A+ +LGW T ++ +
Sbjct: 248 LAQIILDLCDSPSEVEFLEKRPD--DPERRCP--------DITRARTLLGWEPTVSIDDG 297
Query: 366 LKERFEEYVK-IGRDKKAM 383
L+E + + +G+D +A+
Sbjct: 298 LRETIAYFRRYVGQDPRAI 316
>gi|206974687|ref|ZP_03235603.1| conserved domain protein [Bacillus cereus H3081.97]
gi|222096518|ref|YP_002530575.1| isoflavone reductase [Bacillus cereus Q1]
gi|423372904|ref|ZP_17350244.1| hypothetical protein IC5_01960 [Bacillus cereus AND1407]
gi|206747330|gb|EDZ58721.1| conserved domain protein [Bacillus cereus H3081.97]
gi|221240576|gb|ACM13286.1| possible isoflavone reductase [Bacillus cereus Q1]
gi|401098201|gb|EJQ06217.1| hypothetical protein IC5_01960 [Bacillus cereus AND1407]
Length = 340
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 112/280 (40%), Gaps = 61/280 (21%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G ++K P +
Sbjct: 2 KILIL----GGTRFLGRAFVEEALNRGHEVTLFNRG---TNKELFPEVEQL--------- 45
Query: 136 TVWGDPAEVGNVVGGVT------FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
+G+ GGV+ +DVV+D G + +R + D K + +K ++FISS
Sbjct: 46 --------IGDRNGGVSSLENRKWDVVVDTCGFSPHHIRNIGDVLKDN-IKHYIFISSLS 96
Query: 190 IYKPADEPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF------------------- 228
+YK D PH E +++P+ Q++ + S + +
Sbjct: 97 VYK--DWIPHDIKEDYILQPEPTKEQIKAVENGEVSPYEYYGALKVLCEKEAEEYWPRRV 154
Query: 229 ---RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
R + G + D ++ R+ + V +PG + I ++D+++ EN
Sbjct: 155 LHVRAGLLSGMFDYTDRLPYWIQRVAKGGKVLVPGRKDRPVQIVDIKDVANWGLNMAENK 214
Query: 286 EAASSNIFNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYD 324
A IFN+ + +T++ + C + E V D
Sbjct: 215 NAG---IFNVTGPNYDLTMEELLNTCKKVTHSDAEFVWVD 251
>gi|119961604|ref|YP_949736.1| NAD dependent epimerase/dehydratase family protein [Arthrobacter
aurescens TC1]
gi|119948463|gb|ABM07374.1| putative NAD dependent epimerase/dehydratase family protein
[Arthrobacter aurescens TC1]
Length = 324
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 100/253 (39%), Gaps = 33/253 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE- 143
GG IG +L L+ +GHEV N + PP+ E T D E
Sbjct: 7 GGSGHIGSFLVPRLVRAGHEVI-------NVSRGSSPPYADVPEWQQVRQVTADRDHEER 59
Query: 144 ---VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
G+ V + DVV+D L++ + + ++ + L S + + + P
Sbjct: 60 EGSFGDRVAALGADVVVDLICFTLESATALVESLRNQ-TEHLLHCGSIWRHGVSLKLPIA 118
Query: 201 EGD-----------VVKPDAGHVQVEKYISENFSNWASFRPQYMIGSG-------NNKDC 242
EG + K D + E+ + + S P +++G G N D
Sbjct: 119 EGTESAAEPLDQYGIRKRDIAGMLKEETAAGGLAT-TSIHPGHIVGPGWLPIGPLGNLDP 177
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
W I +P+ +PGSG + + H D++ A+ + +AA+ FN+V+ A+T
Sbjct: 178 GVWH--TIASGQPLQVPGSGTELMHHVHADDVAQAFEKAILHRDAAAGEDFNIVAPTALT 235
Query: 303 LDGMAKLCAQAAG 315
+ G + + G
Sbjct: 236 VRGYVSIASSWFG 248
>gi|403529234|ref|YP_006664121.1| NAD dependent epimerase/dehydratase family protein [Arthrobacter
sp. Rue61a]
gi|403231661|gb|AFR31083.1| putative NAD dependent epimerase/dehydratase family protein
[Arthrobacter sp. Rue61a]
Length = 330
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 100/253 (39%), Gaps = 33/253 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE- 143
GG IG +L L+ +GHEV N + PP+ E T D E
Sbjct: 13 GGSGHIGSFLVPRLVRAGHEVI-------NVSRGSSPPYADVPEWQQVRQVTADRDHEER 65
Query: 144 ---VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
G+ V + DVV+D L++ + + ++ + L S + + + P
Sbjct: 66 EGSFGDRVAALGADVVVDLICFTLESATALVESLRNQ-TEHLLHCGSIWRHGVSLKLPIA 124
Query: 201 EGD-----------VVKPDAGHVQVEKYISENFSNWASFRPQYMIGSG-------NNKDC 242
EG + K D + E+ + + S P +++G G N D
Sbjct: 125 EGTESAAEPLDQYGIRKRDIAGMLKEETAAGGLAT-TSIHPGHIVGPGWLPIGPLGNLDP 183
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
W I +P+ +PGSG + + H D++ A+ + +AA+ FN+V+ A+T
Sbjct: 184 GVWH--TIASGQPLQVPGSGTELMHHVHADDVAQAFEKAILHRDAAAGEDFNIVAPTALT 241
Query: 303 LDGMAKLCAQAAG 315
+ G + + G
Sbjct: 242 VRGYVSIASSWFG 254
>gi|424881277|ref|ZP_18304909.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392517640|gb|EIW42372.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 317
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 108/261 (41%), Gaps = 51/261 (19%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
+VL++ GH +G YL L+ +GH+V ++ G P+ + + +
Sbjct: 2 RVLVIGAT--GH--VGTYLVPRLVEAGHDVVTISRGTAK-------PYTANHAWAAVDQR 50
Query: 136 TVWGDPA------EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
+ D A + G V GV D+V+D L++ + A S V FL +
Sbjct: 51 QL--DRAAMERTGDFGQAVRGVKADIVIDMICFTLESAEHLVT-ALSGHVGHFLHTGTIW 107
Query: 190 IYKPADEPPHVE-------GDVVKPDAGHVQVEKYISENFSNWASFR--------PQYMI 234
+ + P +E GD A +E Y+ + A R P +++
Sbjct: 108 THGHSTVVPTLEETPKFPFGDYGTQKAA---IETYLLQQ----ARLRGFPATIIHPGHIV 160
Query: 235 GSG-------NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
G G N + + F + R + +P G++ + H D+++M A+ N A
Sbjct: 161 GPGWTPLNPAGNFNLQ--VFSTLARGETLALPHFGLETVHHVHADDVAAMFMDAIANWNA 218
Query: 288 ASSNIFNLVSDRAVTLDGMAK 308
++ F+ VS++A+TL G A+
Sbjct: 219 STGESFHAVSEQALTLRGYAE 239
>gi|357403452|ref|YP_004915376.1| UDP-glucose 4-epimerase [Methylomicrobium alcaliphilum 20Z]
gi|351716117|emb|CCE21768.1| UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose
4-epimerase) CapN-like [Methylomicrobium alcaliphilum
20Z]
Length = 314
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 22/229 (9%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY----- 217
N++ +A A +GVK+F+FISS G+ ++E P E D P + V KY
Sbjct: 92 NVEGTLNLARQAARAGVKRFVFISSIGVNGNSNEQPFTEMDRPSPVEAY-AVSKYEAECG 150
Query: 218 ----ISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD 273
SE RP + G N D + P+P + + IA + +
Sbjct: 151 LQAIASETGMEVVIIRPPLVYGP-NAPGNFRRLMDFAAKSIPLPFGAVDNKRSLIA-LDN 208
Query: 274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-------LPVEIVHYDPK 326
L + + +++P AA+ IF + V+ + K+ A+A G +PV +++ K
Sbjct: 209 LVEFIVICIDHPNAANE-IFLIADGEDVSTIDLLKMTARAFGRKLLLIPVPVSWLYFAAK 267
Query: 327 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
G ++ + AK +LGW + L++ E Y K
Sbjct: 268 LIGKPGVANSLLGSLR--VDSTKAKRLLGWSPVITMEAQLQKAAEAYFK 314
>gi|300710359|ref|YP_003736173.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|448294683|ref|ZP_21484762.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|299124042|gb|ADJ14381.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|445586360|gb|ELY40642.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
Length = 289
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 115/286 (40%), Gaps = 45/286 (15%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVL+ +GG IG +L +L GH+VT + + S R ++ G
Sbjct: 2 KVLV----TGGTGFIGRHLCAKLAQRGHDVTALARSPDASSLPADVAVER-GDVTDRGTL 56
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGK------NLDAVRPVADWAKSSGVKQFLFISSAG 189
G VV V + + G+ +LD R V D A+++GV + + +S+ G
Sbjct: 57 DFAGQDV----VVNLVALSPLFEPKGEKTHESVHLDGTRNVVDAAEAAGVSRLVQMSALG 112
Query: 190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
P ++ + E+ + + +W FRP + G G F
Sbjct: 113 -ADPDGPTAYIR--------AKGKAERVVEASELDWTIFRPSVVFGDGGE-------FVE 156
Query: 250 IVRKR--PV--PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
RK PV P+PG G V D++S+L AVE+ E + + +T+
Sbjct: 157 FTRKLTPPVIAPLPGGGRTRFQPIWVEDIASLLADAVED-ERHVGETYEIGGPEVLTMAE 215
Query: 306 MAKLCAQAAG---LPVEIVHYDPKAAGIDAKKAFPF-----RNMHF 343
+AKL ++ G +P+ + +A ID PF R++ F
Sbjct: 216 VAKL-SRGGGVTVVPIPMAFAKIGSAAIDPLPFIPFGTDQVRSLEF 260
>gi|29346140|ref|NP_809643.1| mRNA-binding protein [Bacteroides thetaiotaomicron VPI-5482]
gi|383122401|ref|ZP_09943094.1| hypothetical protein BSIG_0861 [Bacteroides sp. 1_1_6]
gi|29338034|gb|AAO75837.1| putative mRNA-binding protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251842508|gb|EES70588.1| hypothetical protein BSIG_0861 [Bacteroides sp. 1_1_6]
Length = 338
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 68/163 (41%), Gaps = 23/163 (14%)
Query: 179 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 227
KQ++FISSA Y KP + P+ + K A V + Y + F
Sbjct: 88 TKQYIFISSASAYQKPLADYRITESTPLVNPYWQYSRHKIAAEEVLMTAYRTTGFPI-TI 146
Query: 228 FRPQYMIGS--------GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 279
RP + GN + + RI+ +PV IPG G + H +D +
Sbjct: 147 VRPSHTYNGTKPPVSLHGNKGNWQ--ILKRILDGKPVIIPGDGSSLWTLTHSKDFAKGYV 204
Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
+ NP A N F++ +D ++T + + + A A G P+ +H
Sbjct: 205 GLMANPHAI-GNAFHITTDESMTWNQIYQTIADALGKPLNALH 246
>gi|341874156|gb|EGT30091.1| hypothetical protein CAEBREN_25184 [Caenorhabditis brenneri]
Length = 342
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 85/211 (40%), Gaps = 17/211 (8%)
Query: 178 GVKQFLFISSAGIYKPA--DEPPHVEGDVVKPDAGHVQVEKYISENF--SNWASFRPQYM 233
GVK+ + IS+ +Y + D P E + K E S W S++ Y+
Sbjct: 128 GVKKLVHISTDEVYGDSFEDTTPKSESASLPNPTNPYAASKAACEMVIRSYWHSYKLPYV 187
Query: 234 IGSGNNKDCEEWFFDRIVRK--------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
+ NN +++ K +P P+ G G+ + +V D S +T
Sbjct: 188 MVRMNNVYGPRQIHTKLIPKFTKLALDGQPYPLMGDGLHTRSWMYVEDCSEAITRVAL-- 245
Query: 286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 345
E I+N+ +D +T + K+ ++++ +P P+ + +Y
Sbjct: 246 EGKLGEIYNIGTDFEMTNIELTKMIHSTVS---KLLNREPTPPTFAPIPDRPYHDRRYYI 302
Query: 346 EPRAAKDILGWRSTTNLPEDLKERFEEYVKI 376
+ ++ +GW+ TT E L + E YVK+
Sbjct: 303 DFSKIRNAMGWQCTTPFSEGLMKTIEYYVKL 333
>gi|254822170|ref|ZP_05227171.1| hypothetical protein MintA_19704 [Mycobacterium intracellulare ATCC
13950]
gi|379747150|ref|YP_005337971.1| hypothetical protein OCU_24310 [Mycobacterium intracellulare ATCC
13950]
gi|378799514|gb|AFC43650.1| hypothetical protein OCU_24310 [Mycobacterium intracellulare ATCC
13950]
Length = 860
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYI 218
N+D R V D +G ++ +F S+A +Y P E D + P + QVE+ +
Sbjct: 75 NIDGARNVLDAMVETGSRRIVFASTAHVYGGGGGAPKAEHDALTPVTVDGQLNAQVERMV 134
Query: 219 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 278
+E + W + R ++G + + W R + PV S + H+ D +
Sbjct: 135 AEAGTEWVAIRSALILG----RSVDNWV--RRMLALPVFPARSSDHRMQVVHLDDALRLF 188
Query: 279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDP 325
A+ + E S + NL + VT + A A G PV + ++P
Sbjct: 189 NQAIVDGEIDSGPV-NLAAAGQVTF----RQIAAALGRPVVRLGFEP 230
>gi|418058902|ref|ZP_12696865.1| NAD-dependent epimerase/dehydratase, partial [Methylobacterium
extorquens DSM 13060]
gi|373567579|gb|EHP93545.1| NAD-dependent epimerase/dehydratase, partial [Methylobacterium
extorquens DSM 13060]
Length = 259
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 49/222 (22%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G IG +L + L G+ V ++ R E+ V GD A
Sbjct: 9 TGATGFIGRHLLRALSERGYRVRVL--------------LRRPVEVPEGASGAVVGDLAR 54
Query: 144 VGNVVGGVT-FDVVLDNNG---------------KNLDAVRPVADWAKSSGVKQFLFISS 187
N+ +T D V+ + G N +A R +AD A+ + V +F+F+SS
Sbjct: 55 PMNMAAALTGVDAVVHSAGLAHAMSGAPEDDFRNSNTEATRKLADAAQRARVGRFVFLSS 114
Query: 188 ----AGIYKPADEPPHVEGDVVKPDAGH----VQVEKYISENFSNWASFRPQYMIGSGNN 239
AG PA P E D +P + + E+ ++E +W + RP + G+G
Sbjct: 115 IRAQAGSSAPA---PLSEADTPEPTDPYGRSKLAAEEALAETGLDWVALRPVLVYGAGVK 171
Query: 240 KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
+ ++ R P P+P ++A R L S+ +LA
Sbjct: 172 GNMAALL--KLART-PYPLP-----LASLAGRRSLVSVESLA 205
>gi|322375050|ref|ZP_08049564.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus
sp. C300]
gi|321280550|gb|EFX57589.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus
sp. C300]
Length = 326
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 139/351 (39%), Gaps = 77/351 (21%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGD--ENS-------DKMKKP 121
KKVL+ +G +G Y+ +EL G++V VG ENS D K+
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQQGYQVRAFGRNRKVGQSLENSSVAFFQGDLTKQE 57
Query: 122 PFNR----FNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
R + +V AG TVWG P E D N+ + V D +
Sbjct: 58 DLVRACQGMDMVVHAGALSTVWG-PWE--------------DFYQTNVLGTKYVLDACRE 102
Query: 177 SGVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P D+ E + + + YI ++ F
Sbjct: 103 AGIQRLVYVSSPSIYAAPRDQLAIKESAAPQEN----NLNNYIRSKLASEKLFKDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 159 SIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAFPFRNMHF 343
+ AS ++N+ + + + + G P+ P + I + F ++ +
Sbjct: 217 LQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPITYRKVPAPLLSVIASSLEFLYKVLKL 275
Query: 344 YAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 375
EP +A +D LG+R ++ E +++ ++Y K
Sbjct: 276 KGEPPLTRYTYYLLRYSQTLDISKAERD-LGYRPQISISEGIEQYVQDYRK 325
>gi|449131947|ref|ZP_21768121.1| udp-glucose 4-epimerase [Rhodopirellula europaea 6C]
gi|448888756|gb|EMB19058.1| udp-glucose 4-epimerase [Rhodopirellula europaea 6C]
Length = 334
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 91/233 (39%), Gaps = 25/233 (10%)
Query: 162 KNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGD--------VVKPDAGHV 212
+++D +R V +K++GV + + SS+ +Y +P + P H + + + G
Sbjct: 113 EDIDGIRNVLSLSKNTGVGRVFYASSSEVYGEPVEMPQHEQTTPLNSRLPYAIIKNLGES 172
Query: 213 QVEKYISENFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHV 271
Y E + FR G D F + +P+ G GMQ V
Sbjct: 173 YFRSYHQEFGLQFNVFRFFNTYGPKQTTDFVVPKFIAAALAGEDIPVYGDGMQTRTFCFV 232
Query: 272 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID 331
D T +++P A I N+ SD +T+ +A+ + G ++VH P G
Sbjct: 233 DDNLDTTTRVLDDPSWACETI-NIGSDIEMTIKSLAETVIEMTGSSSKVVHLPPLPEGDM 291
Query: 332 AKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQ 384
++ M K ILG T L++ E+ + +++ + Q
Sbjct: 292 TRRCPDITKM---------KKILGRELTP-----LRDGLEKLIDAAKNRTSSQ 330
>gi|75676569|ref|YP_318990.1| NAD-dependent epimerase/dehydratase [Nitrobacter winogradskyi
Nb-255]
gi|74421439|gb|ABA05638.1| NAD-dependent epimerase/dehydratase [Nitrobacter winogradskyi
Nb-255]
Length = 316
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 122/322 (37%), Gaps = 56/322 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G L + L + VT++TV D + N++ + V+ A+
Sbjct: 16 AGHRGMVGSALVRRL--AQEHVTLLTVDRREVDLRDQAAVNQW--FAGHHPQVVFLAAAK 71
Query: 144 VGNVVGGVTF--DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEP--- 197
VG ++ T + + DN L V A GV++ LF+ S+ IY K A++P
Sbjct: 72 VGGIIANDTLRGEFIYDN----LIIAANVIHAAHVHGVQKLLFLGSSCIYPKLAEQPLRE 127
Query: 198 ---------PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE----- 243
P E + AG VE Y + S++ + P + G G+N E
Sbjct: 128 DSLLTGPLEPTNEPYAIAKIAGVKMVEAYRRQYDSDFINVMPTNLYGPGDNYHPEYSHVV 187
Query: 244 -----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
+ R+ V + GSG V DL+ ++ + S + N+ +
Sbjct: 188 AGLIRRFHEARVAGASEVTVWGSGKPRREFLCVDDLADACIHLLKT--YSDSELVNIGTG 245
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI----- 353
+T+ A L A G I + G PR D+
Sbjct: 246 EDITIADFAHLVASTVGYGGRINFDTSRPDGT----------------PRKLLDVSRLAR 289
Query: 354 LGWRSTTNLPEDLKERFEEYVK 375
LGWR+ LPE +K +E +++
Sbjct: 290 LGWRAKVPLPEGIKLAYEAFLR 311
>gi|37521775|ref|NP_925152.1| epimerase/dehydratase [Gloeobacter violaceus PCC 7421]
gi|35212773|dbj|BAC90147.1| gll2206 [Gloeobacter violaceus PCC 7421]
Length = 362
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 95/244 (38%), Gaps = 37/244 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDEN----SDKMKKPPFNRFNEIVSAGGKTVWG 139
+G IG L LL GHEVT + G + +++ P + +I + + G
Sbjct: 6 TGTEGYIGTLLGGVLLERGHEVTGLDTGFHKVGWLYNGVRQAPLHLRQDIRHITEEDLRG 65
Query: 140 ------------DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS 187
DP VG + +T+D+ N +A AK +GV +F+++SS
Sbjct: 66 YDAIVHLAELSNDP--VGQLNPTITYDI-------NHIGTIELAKKAKRAGVSRFVYMSS 116
Query: 188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--SFRPQYMIGSGNNKDCEEW 245
+Y E E V P + + + ++ + + A +F P ++ +
Sbjct: 117 CSVYGAGGEKFSTEESEVNPLTAYARCKIFVERDLAPMADENFSPTFLRNATAYGPSPRM 176
Query: 246 FFDRIVRK--------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN-IFNLV 296
FD +V + + + G + HV D+ + A+E P N IFN V
Sbjct: 177 RFDLVVNSLAGFAWTAKEIRMESDGTPWRPFVHVLDMCQAIYCALEAPRQMVHNEIFN-V 235
Query: 297 SDRA 300
D A
Sbjct: 236 GDNA 239
>gi|386716977|ref|YP_006183303.1| UDP-glucose 4-epimerase [Stenotrophomonas maltophilia D457]
gi|384076539|emb|CCH11120.1| UDP-glucose 4-epimerase [Stenotrophomonas maltophilia D457]
Length = 306
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 31/228 (13%)
Query: 154 DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGH- 211
D + D G NL + + + GV++ + SS G +Y D P E ++P + +
Sbjct: 82 DPIADIEG-NLIGTHRLLEAMRVRGVRRLCYFSSGGTVYGNPDTLPVPETHALRPISSYG 140
Query: 212 ---VQVEKYIS----ENFSNWASFRPQYMIGSGNN----KDCEEWFFDRIVRKRPVPIPG 260
V +E Y++ + + + RP G G + + F R + PV I G
Sbjct: 141 IVKVAIEHYLTMFQRQGWLDPVIIRPSNPYGPGQSTRGIQGAVAVFLGRALAGLPVEIWG 200
Query: 261 SGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG--LPV 318
G + + DL + LA E+ + +FN S ++L+ + A+G LPV
Sbjct: 201 DGETVRDYVFIDDLIDLALLATES---GRTGVFNAASGNGISLNELCAAIRVASGRALPV 257
Query: 319 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDL 366
+ Y P + F R++ + + AK +LGW L E L
Sbjct: 258 Q---YKP-------GRTFDVRSIVL--DVQRAKQLLGWTPKIALAEGL 293
>gi|448316711|ref|ZP_21506292.1| NAD-dependent epimerase/dehydratase [Natronococcus jeotgali DSM
18795]
gi|445607126|gb|ELY61020.1| NAD-dependent epimerase/dehydratase [Natronococcus jeotgali DSM
18795]
Length = 374
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 10/148 (6%)
Query: 164 LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG---DVVKP-DAGHVQVEKYIS 219
+D R V A+ GV++ +ISS +Y D P E + V P +Q E +
Sbjct: 112 IDGTRNVLWAARDRGVERVCYISSTAVYGTHDAHPITEESPLEGVGPYGEAKIQAEN-VC 170
Query: 220 ENFSNWAS----FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS 275
+F RP+ +G + FD I VP+ G G + HVRDL
Sbjct: 171 RDFRRMGMCVPILRPKTFVGP-KRLGVFQVLFDWIADGANVPLVGRGDNRYQLLHVRDLV 229
Query: 276 SMLTLAVENPEAASSNIFNLVSDRAVTL 303
+ + L + EAA ++ FN+ +D T+
Sbjct: 230 AAVELMLTGDEAAVNDTFNVGTDEFGTM 257
>gi|300710052|ref|YP_003735866.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|448297180|ref|ZP_21487226.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|299123735|gb|ADJ14074.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|445579489|gb|ELY33882.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
Length = 296
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 12/121 (9%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F D+ P+ + G G Q + HV D+ + LA+E + +N+ + VT+
Sbjct: 184 FLDQARANDPITVHGDGTQTRDFVHVEDVVRVNLLAMETDHVGEA--YNVGTGDTVTIAE 241
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
+A+ + G EIVH + +A I+ H AE A++ LG+ T L +
Sbjct: 242 LARAVREVVGSDSEIVHTEGRAGDIN----------HSCAEITKARERLGYEPTVPLADG 291
Query: 366 L 366
L
Sbjct: 292 L 292
>gi|431792678|ref|YP_007219583.1| nucleoside-diphosphate-sugar epimerase [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430782904|gb|AGA68187.1| nucleoside-diphosphate-sugar epimerase [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 306
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGH---EVTIMTVGDENSDKMKKPPFNRFNEIVSA 132
KVL+ +G +G L KEL GH EV + G+EN + + + +
Sbjct: 3 KVLV----TGSKGTLGTRLVKELQERGHEVWEVDLRHAGEENYFRADIAKYRQLERVFEQ 58
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
V+ AE G + G +D + + N+ R + +W G + +F SS+ IY
Sbjct: 59 DYDVVYHLAAEFGRINGEHYYDTLWE---ANVIGTRNILEWQLKKGFR-LIFTSSSEIYG 114
Query: 193 PADEP 197
A EP
Sbjct: 115 EATEP 119
>gi|229072912|ref|ZP_04206110.1| NAD-dependent epimerase/dehydratase [Bacillus cereus F65185]
gi|228710255|gb|EEL62231.1| NAD-dependent epimerase/dehydratase [Bacillus cereus F65185]
Length = 295
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVS 131
KKVL++ GG G +L + LL GH+VTI T G D ++K+ +R
Sbjct: 7 KKVLVL----GGTRFFGKHLVEALLQEGHDVTIATRGITEDSFGSRVKRLIVDR------ 56
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
D ++ +G ++D+V DN +L+A + + + + K+++ SS +Y
Sbjct: 57 -------EDEKQLAERLGDKSYDIVYDNLCYSLNAAKVICEVLRGK-TKKYVMTSSMAVY 108
Query: 192 KPA 194
+PA
Sbjct: 109 EPA 111
>gi|434402600|ref|YP_007145485.1| nucleoside-diphosphate-sugar epimerase [Cylindrospermum stagnale
PCC 7417]
gi|428256855|gb|AFZ22805.1| nucleoside-diphosphate-sugar epimerase [Cylindrospermum stagnale
PCC 7417]
Length = 314
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 21/220 (9%)
Query: 162 KNLDAVRPVADWAK-SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEK 216
+N++A + + + AK + +K +F SS+ +Y A+ P E + P + + + E+
Sbjct: 101 QNINATQVLLEAAKDAQHLKSLVFASSSSVYGDAETLPTHEEIIPLPVSPYGVTKLAAER 160
Query: 217 YISENFSNWA----SFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHV 271
N+ S R + G D FF ++ +PI G G Q + V
Sbjct: 161 LCGIYHKNFGVPCVSLRYFTVYGPRQRPDMAFHKFFRAVLEDEAIPIYGDGQQTRDFTFV 220
Query: 272 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID 331
DL + LA + AA IFN+ V L + A+ G P++ +Y KA G D
Sbjct: 221 SDLIAA-NLAAASTPAAVGQIFNIGGGSRVVLAEVLDTIAEIVGKPIK-RNYIEKAMG-D 277
Query: 332 AKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 371
A+ H A+ A+ ILG++ +L + L + ++
Sbjct: 278 AR--------HTAADISKARKILGYQPQVSLRDGLTQEWQ 309
>gi|400597748|gb|EJP65472.1| NAD-dependent epimerase/dehydratase [Beauveria bassiana ARSEF 2860]
Length = 332
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 106/249 (42%), Gaps = 42/249 (16%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--PA 142
GG IG +A++ L GH+VT+ FNR ++ G + + GD
Sbjct: 7 GGTHYIGRLVAEQSLARGHQVTV---------------FNRGSKPAPTGAQALVGDRLAP 51
Query: 143 EVGNVVGGVTFDVVLDNNGKNLDAV-RPVADWAKSSGVKQFLFISSAGIYKPADEP-PHV 200
+ + G+ FD V+D + AV R VA A + + F+SS +Y A P P+
Sbjct: 52 DGYAALSGLFFDAVIDTWAGDASAVKRAVA--ALRDRTRHYAFVSSISVYDHAASPGPYD 109
Query: 201 EG----DVVKPDAGHVQVEKYISENFSNWAS-----FRPQYMIGSGNNKDCE-EWFFDRI 250
E D+ K + + +K SE + + RP ++G G W+ R+
Sbjct: 110 ETSALRDIDKTPVAYFR-DKLGSEREAAASGVPTLIVRPGLIVGPGETTPGRLPWWLRRM 168
Query: 251 VRKRPVPIPGS---GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA-VTLDGM 306
R PG +QF + RDL++ L V+ E F+ VS +T++G+
Sbjct: 169 ERGDATMAPGPRDLALQFID---GRDLAAFL---VDGAERRLEGAFDAVSGIGHITMEGL 222
Query: 307 AKLCAQAAG 315
+ +AAG
Sbjct: 223 LEAANEAAG 231
>gi|229185434|ref|ZP_04312616.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus BGSC
6E1]
gi|228598022|gb|EEK55660.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus BGSC
6E1]
Length = 326
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + +K G+K+ + +S+ IY DE +V + PD H K+++E
Sbjct: 86 NVLGTKHIIEGSKKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKHMAE 145
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 146 QAIDQAFVHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 203
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D V L
Sbjct: 204 NVVDALLLCMHSPKHTLGKKYNITNDERVNL 234
>gi|225620609|ref|YP_002721866.1| UDP-glucose 4-epimerase [Brachyspira hyodysenteriae WA1]
gi|225215428|gb|ACN84162.1| UDP-glucose 4-epimerase [Brachyspira hyodysenteriae WA1]
Length = 339
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 139/344 (40%), Gaps = 71/344 (20%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM--------KKPPFNRFN 127
K+LI +G I YL +LL GHEV +G +N K P F + +
Sbjct: 2 KILI----TGSAGFISGYLVDQLLERGHEV----IGIDNYSKYGYLEKSYDNHPKFTKVD 53
Query: 128 EIVSAGG--KTVWGDPAEV---GNVVGGVTF------DVVLDNNGKNLDAVRPVADWA-K 175
V K + D +V ++GG+T+ D++ +N K + + A WA K
Sbjct: 54 GDVKDTNLMKNLIEDCDQVVAIAAMIGGITYFHEYAYDLLAENE-KIIASTFDSAIWAFK 112
Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVK--PDAGHVQVEKYISENFSN--------- 224
+ +K+ +SS+ +++ P EG+ K P +K E F+
Sbjct: 113 NKKLKKINVLSSSMVFESTSTYPTEEGEQFKCPPPLSTYGFQKLACEYFTKGAYEQYKLP 172
Query: 225 WASFRPQYMIG-------------SGNNKDCEEWFFDRIVRK-----RPVPIPGSGMQFT 266
+ RP +G SGN K +V+K P+ I GSG Q
Sbjct: 173 YTIIRPFNCVGIGERRAKNEKEINSGNVKLAMSHVVPDLVQKVLKGQDPLHILGSGNQIR 232
Query: 267 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA--AGLPVEIVHYD 324
+ + DL+ + +E+ +A + + FN+ + ++ T+ +A + + P+ V +
Sbjct: 233 HYTYGGDLARGIVTCIESDKAINED-FNISTAQSTTVKELAAVIWKKINGDKPLNFVSDE 291
Query: 325 PKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 368
P D +K P AK ILG+ +TT L E L E
Sbjct: 292 PYQ--YDVQKRVP--------SVEKAKRILGFEATTTLSEMLDE 325
>gi|421613234|ref|ZP_16054322.1| dTDP-glucose 4,6 dehydratase [Rhodopirellula baltica SH28]
gi|408496001|gb|EKK00572.1| dTDP-glucose 4,6 dehydratase [Rhodopirellula baltica SH28]
Length = 334
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 91/233 (39%), Gaps = 25/233 (10%)
Query: 162 KNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGD--------VVKPDAGHV 212
+++D +R V +K++GV + + SS+ +Y +P + P H + + + G
Sbjct: 113 EDIDGIRNVLSLSKNTGVGRVFYASSSEVYGEPVEMPQHEQTTPLNSRLPYAIIKNLGES 172
Query: 213 QVEKYISENFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHV 271
Y E + FR G D F + +P+ G GMQ V
Sbjct: 173 YFRSYHQEFGLQFNVFRFFNTYGPKQTSDFVVPKFIAAALAGEDIPVYGDGMQTRTFCFV 232
Query: 272 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID 331
D T +++P A I N+ SD +T+ +A+ + G ++VH P G
Sbjct: 233 DDNLDTTTRVLDDPSWACETI-NIGSDIEMTIKSLAETVIEMTGSSSKVVHLPPLPEGDM 291
Query: 332 AKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQ 384
++ M K ILG T L++ E+ + +++ + Q
Sbjct: 292 TRRCPDITKM---------KKILGRELTP-----LRDGLEKLIDAAKNRTSSQ 330
>gi|417936456|ref|ZP_12579770.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus infantis X]
gi|343400891|gb|EGV13400.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus infantis X]
Length = 326
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 107/260 (41%), Gaps = 45/260 (17%)
Query: 129 IVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS 187
+V AG TVWG P E D N+ + V + + +G+++ ++SS
Sbjct: 69 VVHAGALSTVWG-PWE--------------DFYQANVLGTKTVLEACRQAGIQRLAYVSS 113
Query: 188 AGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF-----------RPQYMIG 235
IY P D+ E D P+ ++ YI ++ F RP+ + G
Sbjct: 114 PSIYAAPKDQLAIKESDA--PEENNLN--NYIRSKLASEKLFKDYPDVPSIILRPRGLFG 169
Query: 236 SGNNKDCEEWFFDRIV---RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
G+ R++ +K +P+ G G Q ++ V +++ + LA+E PE A +I
Sbjct: 170 IGDTS-----ILPRVINLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALEAPE-AKGDI 223
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK-AAGIDAKKAFPFRNMHFYAEP---R 348
+N+ + + + G P++ +GI + F ++ ++ EP R
Sbjct: 224 YNITNGEPRAFRDLLEESLTGLGYPIKYRKISASLLSGIASSLEFLYKTLNLKGEPALTR 283
Query: 349 AAKDILGWRSTTNLPEDLKE 368
+L + T ++ + KE
Sbjct: 284 YTYYLLRYSQTLDISKAEKE 303
>gi|406880632|gb|EKD28932.1| NAD-dependent epimerase/dehydratase [uncultured bacterium]
Length = 353
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 114/279 (40%), Gaps = 55/279 (19%)
Query: 72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-------HE-------------VTIMTVG 111
++KK V I +G IG Y+ KE + +G H+ ++++ G
Sbjct: 4 SKKKYVFI----TGATGFIGSYVVKEFIQNGWIVAALIHKTSSTELDILAQKGISVLFYG 59
Query: 112 D---ENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGK--NLDA 166
D ENS N N+++ +G P EV G DV D K N D+
Sbjct: 60 DVSHENS------LINVMNQMLKE-----FGTPPEVIVHCAGRASDVGRDTEFKRNNFDS 108
Query: 167 VRPVADWAKSSGVKQFLFISSAGIY------KPADEPPHVEGDVVKPDAGH-VQVEKYIS 219
VR + W + +K+F+F+S+ +Y +E E P + + EK++
Sbjct: 109 VRFIGQWVLKNNIKRFIFVSTTDVYGLRNFNHEREEELSFEKKSWNPYPKYKIAAEKWLI 168
Query: 220 ENF--SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN---IAHVRDL 274
EN + RP + G G+ +R P I ++ N +AHV+++
Sbjct: 169 ENLPSEKYVIIRPAAVWGVGDKTLIPR--ILNFIRMSPFIIHFGYLKGKNRWPLAHVKNV 226
Query: 275 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 313
++++ LA PE ++ +++ + T D ++ +
Sbjct: 227 ATVIYLAAMLPEMTGISL-HVLDEEYTTSDEFYRMLIRV 264
>gi|423458902|ref|ZP_17435699.1| hypothetical protein IEI_02042 [Bacillus cereus BAG5X2-1]
gi|401145530|gb|EJQ53054.1| hypothetical protein IEI_02042 [Bacillus cereus BAG5X2-1]
Length = 341
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 110/275 (40%), Gaps = 51/275 (18%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E+L GHEVT+ G K F ++
Sbjct: 2 KILIL----GGTRFLGRAFVEEVLNRGHEVTVFNRG------TNKEIFPEVEHLI----- 46
Query: 136 TVWGDPAEVGNVVG--GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
GD GNV+ +DVV+D G + +R V + K+ +K ++FISS +YK
Sbjct: 47 ---GDRN--GNVLSLENRKWDVVIDTCGFSPHHIRNVGEVLKNH-IKHYIFISSLSVYK- 99
Query: 194 ADEPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF----------------------R 229
D PH E +++P+ Q++ + S + + R
Sbjct: 100 -DWIPHDIKEDYILQPEPTEEQIKAVENGEVSPYEHYGALKVLCEKEAEKYWPGRVLHVR 158
Query: 230 PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
+ G + D ++ R+ + V +PG + + ++D++ EN +A +
Sbjct: 159 AGLLSGMFDYTDRLTYWIQRVAKGGKVLVPGRKDRPVQMVDIKDVACFGLNMAENNKAGT 218
Query: 290 SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
NI + +T++ + C + E V D
Sbjct: 219 FNITG--PNDKLTMEELLNTCKKVTNSDAEFVWVD 251
>gi|308070546|ref|YP_003872151.1| UDP-glucose 4-epimerase [Paenibacillus polymyxa E681]
gi|305859825|gb|ADM71613.1| Putative UDP-glucose 4-epimerase [Paenibacillus polymyxa E681]
Length = 311
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 29/221 (13%)
Query: 177 SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYISENFS----NWASF 228
+GV +F+F S++G+Y + E D V+P +G+ + E YI + N+
Sbjct: 106 AGVSKFIFASTSGVYGELQKQCIQEDDPVEPISGYGLSKLTAESYIRLFYRLYGLNYTIL 165
Query: 229 RPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
R + G G E F +R+ + P+ I G G Q + +V+D+ A+
Sbjct: 166 RYGNVYGPGQAAKGEGGVVALFMERLKKGSPLLIHGDGTQTRDFVYVKDVVRANMAAI-- 223
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFY 344
AA ++ + R +++ +A + G V V Y P AG ++H
Sbjct: 224 -HAADQRTVHVSTGRTTSINRLAYDLLKLHGSSVRPV-YSPARAG----------DIHHS 271
Query: 345 AEPRA-AKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQ 384
A A+ L W + L+E + +G DK+ Q
Sbjct: 272 CLSNAVARHWLRWEPLYGISAGLRETYVS--SMGTDKEGSQ 310
>gi|240138623|ref|YP_002963095.1| UDP-glucose 4-epimerase [Methylobacterium extorquens AM1]
gi|240008592|gb|ACS39818.1| putative UDP-glucose 4-epimerase [Methylobacterium extorquens AM1]
Length = 307
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 89/222 (40%), Gaps = 49/222 (22%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G IG +L + L G+ V ++ R E+ V GD A
Sbjct: 9 TGATGFIGRHLLRALSERGYRVRVL--------------LRRPVEVPEGASGAVVGDLAR 54
Query: 144 VGNVVGGVT-FDVVLDNNG---------------KNLDAVRPVADWAKSSGVKQFLFISS 187
N+ +T D V+ + G N +A R +AD A+ + V +F+F+SS
Sbjct: 55 PMNMAAALTGVDAVVHSAGLAHAMSGAPEDDFRNSNTEATRKLADAAQRARVGRFVFLSS 114
Query: 188 ----AGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSNWASFRPQYMIGSGNN 239
AG PA P E D +P + E+ ++E +W + RP + G+G
Sbjct: 115 IRAQAGSSAPA---PLSEADTPEPTDPYGRSKLAAEEALAETGLDWVALRPVLVYGAGVK 171
Query: 240 KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
+ ++ R P P+P ++A R L S+ +LA
Sbjct: 172 GNMAALL--KLART-PYPLP-----LASLAGRRSLVSVESLA 205
>gi|319795313|ref|YP_004156953.1| NAD-dependent epimerase/dehydratase [Variovorax paradoxus EPS]
gi|315597776|gb|ADU38842.1| NAD-dependent epimerase/dehydratase [Variovorax paradoxus EPS]
Length = 319
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 94/233 (40%), Gaps = 29/233 (12%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE--PPHVEGDVVKPDAGH----VQVEK 216
N D +A+ A ++GVK+ +F+SS G+ + P E D +P + ++ E+
Sbjct: 90 NRDGTLNLAEQAATTGVKRLIFLSSIGVMGSTTDGRAPFSESDTPQPMMDYAISKLEAER 149
Query: 217 YISENFSNWA----SFRPQYMIGSGNNKDCEEWFFDRIVRKR----PVPIPGSGMQFTNI 268
+ E + RP + G G + F R+VR P+P+ +
Sbjct: 150 GLQEIATRTGLEVVILRPPMVYGPGAPGN-----FARLVRALVKGWPLPLGSVSSNRRSY 204
Query: 269 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA------QAAGLPVEIVH 322
+++L ++ +E+P AAS + T+D + ++ + PV ++
Sbjct: 205 IGIQNLVDLIVTCIEHPAAASQTFLACDGEDVSTVDLLRRMGVALKKSPRLLPFPVSLIK 264
Query: 323 YDPKAAGIDAKKAFPFR-NMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 374
AG+ K + A+ +LGW +L E L+ EEY+
Sbjct: 265 V---GAGVLGKATLAQSLCASLQVDGDKARQMLGWEPPLDLNEGLRLAVEEYL 314
>gi|52142471|ref|YP_084357.1| isoflavone reductase [Bacillus cereus E33L]
gi|51975940|gb|AAU17490.1| possible isoflavone reductase [Bacillus cereus E33L]
Length = 341
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 123/293 (41%), Gaps = 49/293 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G + +E L GHEVT+ G K F +++ G +
Sbjct: 2 KILIL----GGTRFLGRAVVEEALNRGHEVTLFNRG------TNKEIFPEVEQLI--GDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + N +DVV+D G + +R V + K + ++ ++FISS +YK
Sbjct: 50 N--GDVSSLEN----RKWDVVIDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSVYKDWI 102
Query: 196 EPPHVEGD-VVKPDAGHVQVEKYISENFSNWASF----------------------RPQY 232
P H++ D +++P+ Q++ + S + + R
Sbjct: 103 -PHHIKEDYILQPEPTKEQIKAVENGEISPYEHYGALKVLCEKEAEKYWPRRVLHVRAGL 161
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G + D ++ R+ + V +PG + I ++D+++ VEN +A I
Sbjct: 162 LSGMFDYTDRLPYWIGRVAKGGKVLVPGRKNRPVQIVDIKDVANWGLNMVENNKAG---I 218
Query: 293 FNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFY 344
FN + +T++ + C + E V + + ++ K P+ M +
Sbjct: 219 FNATGPNYELTMEELLNTCKKVTNSDAEFVWIE--ESFMNEHKVQPWTEMPLW 269
>gi|418292867|ref|ZP_12904797.1| epimerase [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379064280|gb|EHY77023.1| epimerase [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 309
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 115/294 (39%), Gaps = 39/294 (13%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG L LL G+ V ++ + ++ K + P + E+V D A
Sbjct: 9 TGGAGFIGSNLVDALLARGYAVRVLD--NLSTGKRENLPQDERVELVVGD----VADAAC 62
Query: 144 VGNVVGGV--------------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
V V G + D + NL + + + +GVK+ LF SSA
Sbjct: 63 VRRAVQGCQAVVHLAAVASVQASVDDPFGTHQSNLIGTLNLCEAMREAGVKRVLFASSAA 122
Query: 190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNK 240
+Y E ++ D K +K SE++ ++ +R Q+ + G +
Sbjct: 123 VYGNNGEGQAIDEDTPKAPLTPYAADKLASEHYLDF--YRRQHGLEPVVFRFFNIFGPRQ 180
Query: 241 D-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
D F +R + P+ + G G Q + +V DL +L A+E+PEA +
Sbjct: 181 DPSSPYSGVISIFTERAQKGLPIAVFGDGEQTRDFLYVADLVEVLVQALESPEAPEGAV- 239
Query: 294 NLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 347
N+ ++A +L+ + G E+ + + I +A R + Y P
Sbjct: 240 NVGLNQATSLNQLLGAIGDVLGGLPEVSYQAARQGDIRHSRANNARLLQRYRLP 293
>gi|428316327|ref|YP_007114209.1| UDP-glucuronate 4-epimerase [Oscillatoria nigro-viridis PCC 7112]
gi|428240007|gb|AFZ05793.1| UDP-glucuronate 4-epimerase [Oscillatoria nigro-viridis PCC 7112]
Length = 315
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 131/320 (40%), Gaps = 43/320 (13%)
Query: 81 NTNSGGHAVIGFYLAKELLGSGHEVT-IMTVGDENSDKMKKPPFNRF----------NEI 129
N +G IG +L + LL G +V I V D ++K+ F + I
Sbjct: 3 NIVTGAAGFIGSHLVETLLKQGEKVIGIDEVNDYYDPELKRKNLALFTKHPNFQLLEDNI 62
Query: 130 VS-------AGGKTVWGDPAEVG-NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVK 180
+S A + ++ A+ G G F + +N++A + + + AK++ +K
Sbjct: 63 LSLDWRSLLANTEVIYHQAAQAGVRASWGEGFRSYTE---RNINATQVILEAAKNAPQLK 119
Query: 181 QFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYISENFSNWA----SFRPQY 232
+F+ SS+ +Y A+ P E +P + + + E+ S + N+ R
Sbjct: 120 RFVLASSSSVYGNAETFPTSETACPQPVSPYGITKLAAERLCSLYYHNFGVPATMLRYFT 179
Query: 233 MIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G D FF I+R + I G G Q + + D + A + PEA
Sbjct: 180 VYGPRQRPDMAFHIFFKSILRGEAISIYGDGQQTRDFTFISDCIAANVAAAKVPEAVGE- 238
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAK 351
IFN+ V L + + P+ I +Y + G DA+ A+ A+
Sbjct: 239 IFNIGGGSRVALAEVIHIMENIVDRPIRI-NYLQSSKG-DARDT--------SADVSKAQ 288
Query: 352 DILGWRSTTNLPEDLKERFE 371
ILG+++ +L E L++ +E
Sbjct: 289 KILGYQAQVSLREGLRQEWE 308
>gi|452954631|gb|EME60031.1| UDP-glucose 4-epimerase [Amycolatopsis decaplanina DSM 44594]
Length = 309
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 122/325 (37%), Gaps = 56/325 (17%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
KKVL +GG I ++ L+ G+ V + D M + R NE V+ G
Sbjct: 4 KKVLF----TGGGGFIAAHVIPMLIEGGYTVRVF-------DNMTRGDRARINEFVATGK 52
Query: 135 KTVWGDPAEVGNVVG----GVTFDVVLDNNGKNLDAVRP-------------VADWAKSS 177
+ G V G T + N P V A
Sbjct: 53 VELVEKDVRYGGAVREAMRGCTHVIHFATVSINKSVADPHESIDINMVGNHNVFAAAADE 112
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKP--------DAGHVQVEKYISENFSNWASFR 229
GV++ +F S+A +Y P E D +KP AG + Y +W + R
Sbjct: 113 GVERLVFASTASVYGDPKRLPMHEDDELKPLTPYCISKRAGEDMLGFYERTKGLSWNALR 172
Query: 230 PQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
+ G G + F R+ +P I G G Q + HV DL+ + A+E+
Sbjct: 173 FFNVYGPGQKIEAYYTSVINHFIQRLRAGQPPIIDGRGDQSMDFVHVTDLARAVVAALES 232
Query: 285 PEAASSNI-FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 343
+A N+ N+ + ++ +AK+ A G+ VE + ++ + + + A R
Sbjct: 233 EQA---NLPINIGTGIDTSIATLAKILIDAVGVNVEPL-FNERDVLVSRRAADITR---- 284
Query: 344 YAEPRAAKDILGWRSTTNLPEDLKE 368
A+++LGW ++ E + E
Sbjct: 285 ------AREVLGWEPKISVEEGMYE 303
>gi|110635113|ref|YP_675321.1| NAD-dependent epimerase/dehydratase [Chelativorans sp. BNC1]
gi|110286097|gb|ABG64156.1| NAD-dependent epimerase/dehydratase [Chelativorans sp. BNC1]
Length = 369
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F R+ +P I G Q + HVRD++ LA+E+ AA + N+ S A T+
Sbjct: 228 FASRLANNQPPLIFEDGRQKRDFVHVRDVARAFRLALESKTAA-GQVINVGSGNAYTIQQ 286
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
+A++ A A GL + K ++ ++ R H +A+ A D+LG+ L ED
Sbjct: 287 VAEILADAMGLA------EIKPEIMNKMRSGDIR--HCFADISKAHDLLGFEPQHRL-ED 337
Query: 366 LKERFEEYVK 375
F E+V+
Sbjct: 338 TVAEFAEWVR 347
>gi|77404745|ref|YP_345318.1| nucleotide di-P-sugar epimerase or dehydratase [Rhodobacter
sphaeroides 2.4.1]
gi|77390395|gb|ABA81577.1| putative nucleotide di-P-sugar epimerase or dehydratase
[Rhodobacter sphaeroides 2.4.1]
Length = 320
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 107/272 (39%), Gaps = 59/272 (21%)
Query: 142 AEVGNVVGGVTF--DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-----KPA 194
A+VG + T+ D + DN L V A ++GV++ LF+ S+ IY +P
Sbjct: 62 AKVGGIYANNTYPADFIYDN----LMIQSNVIHQAHAAGVRKLLFLGSSCIYPRDVAQPM 117
Query: 195 DEPPHVEGDVVKPD---------AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-- 243
E + G +++P AG E Y + +++ S P + G G+N E
Sbjct: 118 AEEALLTG-LLEPTNEPYAIAKIAGIKLCESYNRQYGTDYRSVMPTNLYGPGDNFHPENS 176
Query: 244 -------EWFFDRIVRKR-PVPIPGSGMQFTNIAHVRDLSS----MLTLAVENPEAASSN 291
F + +V R V I GSG HV D++ ++ L E A +
Sbjct: 177 HVLPALMRRFHEAVVEGRDEVLIWGSGRPMREFLHVDDMAKGALFVMGLDAETYRANTQP 236
Query: 292 IF---NLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPR 348
+ NL + +++ +A+L A+ G IV K G PR
Sbjct: 237 MLSHVNLGTGEDISIADLARLIAEVIGFQGRIVFDTSKPDG----------------APR 280
Query: 349 AAKDI-----LGWRSTTNLPEDLKERFEEYVK 375
D+ +GWR+ L E + E + + K
Sbjct: 281 KLMDVGRLTLMGWRAEIALQEGITETYRWFTK 312
>gi|417305380|ref|ZP_12092350.1| udp-glucose 4-epimerase [Rhodopirellula baltica WH47]
gi|327538334|gb|EGF25008.1| udp-glucose 4-epimerase [Rhodopirellula baltica WH47]
Length = 334
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 91/233 (39%), Gaps = 25/233 (10%)
Query: 162 KNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGD--------VVKPDAGHV 212
+++D +R V +K++GV + + SS+ +Y +P + P H + + + G
Sbjct: 113 EDIDGIRNVLSLSKNTGVGRVFYASSSEVYGEPVEMPQHEQTTPLNSRLPYAIIKNLGES 172
Query: 213 QVEKYISENFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHV 271
Y E + FR G D F + +P+ G GMQ V
Sbjct: 173 YFRSYHQEFGLQFNVFRFFNTYGPKQTTDFVVPKFIAAALAGEDIPVYGDGMQTRTFCFV 232
Query: 272 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID 331
D T +++P A I N+ SD +T+ +A+ + G ++VH P G
Sbjct: 233 DDNLDTTTRVLDDPSWACETI-NIGSDIEMTIKSLAETVIEMTGSSSKVVHLPPLPEGDM 291
Query: 332 AKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQ 384
++ M K ILG T L++ E+ + +++ + Q
Sbjct: 292 TRRCPDITKM---------KKILGRELTP-----LRDGLEKLIDAAKNRTSSQ 330
>gi|325276582|ref|ZP_08142325.1| NAD-dependent epimerase/dehydratase [Pseudomonas sp. TJI-51]
gi|324098291|gb|EGB96394.1| NAD-dependent epimerase/dehydratase [Pseudomonas sp. TJI-51]
Length = 310
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 118/300 (39%), Gaps = 32/300 (10%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIVS--------A 132
+GG IG +L LL G+ V I+ + G + ++ P V+ A
Sbjct: 9 TGGAGFIGSHLCDALLDKGYAVRILDDLSTGRRGNLQVDHPRLELIEGDVADAALVMRAA 68
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
G + A V +V V V + N V + + G+++ +F SSA +Y
Sbjct: 69 AGCSAVVHLAAVASVQASVEDPV--RTHQSNFIGTLNVCEAMRVHGLRRVVFASSAAVYG 126
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD-- 241
E + D K V+K SE + ++ +R Q+ + G +D
Sbjct: 127 NNGEGESIAEDTPKAPLTPYAVDKLASEQYLDF--YRRQHGLEPVVFRFFNIFGPRQDPS 184
Query: 242 -----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
F +R V+ P+ + G G Q + +V DL ++ A+E P+ + N+
Sbjct: 185 SPYSGVISIFCERAVQGLPITVYGDGEQTRDFLYVGDLVQVMVQALEQPQVEEGAV-NIG 243
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW 356
++A +++ M + G + + +A I +A R + +A P+A + G
Sbjct: 244 LNQATSINQMLAALQKVVGSLPAVTYAAARAGDIRHSRADNQRLLARFAFPQATPMVEGL 303
>gi|357390354|ref|YP_004905194.1| hypothetical protein KSE_34310 [Kitasatospora setae KM-6054]
gi|311896830|dbj|BAJ29238.1| hypothetical protein KSE_34310 [Kitasatospora setae KM-6054]
Length = 333
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 102/262 (38%), Gaps = 40/262 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---P 141
GG +G A E L GH VT G +D PP G + V GD P
Sbjct: 7 GGSKFLGRAYATEALARGHRVTTFNRGVSRTD----PP----------GVEAVHGDRGNP 52
Query: 142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH-V 200
A++ +V G T+D V+D +G+ V A + F+SS I+ AD P H V
Sbjct: 53 ADLERLVDGRTWDAVVDTSGQQPHDVATTARLLDGR-AGHYGFVSS--IHAFADWPAHPV 109
Query: 201 EGDV--------VKPD-----AGHVQVEKYISENFSNWAS-FRPQYMIGSGNNKDCEEWF 246
+ D + PD A E+ ++ +F+ A+ +IG W+
Sbjct: 110 DADSATLDCPGDLPPDQPFANALKAGCERALTAHFTGPAAILNCGLLIGPHEPIGRLPWW 169
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM-LTLAVENPEAASSNIFNLVSDRAVTLDG 305
DRI R V PG + ++ RD ++ L LA A+ R+ T
Sbjct: 170 LDRIARGGRVLAPGHPDRPLSLIDARDFAAFGLDLAERR---AAGRYVTTAPIRSTTTGE 226
Query: 306 MAKLCAQAAGLPVEIVHYDPKA 327
C A G E+V + P A
Sbjct: 227 FLDACRTATGSDAELV-WTPDA 247
>gi|254561221|ref|YP_003068316.1| UDP-glucose 4-epimerase [Methylobacterium extorquens DM4]
gi|254268499|emb|CAX24456.1| putative UDP-glucose 4-epimerase [Methylobacterium extorquens DM4]
Length = 307
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 89/222 (40%), Gaps = 49/222 (22%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G IG +L + L G+ V ++ R E+ V GD A
Sbjct: 9 TGATGFIGRHLLRALSERGYRVRVL--------------LRRPVEVPEGASGAVVGDLAR 54
Query: 144 VGNVVGGVT-FDVVLDNNG---------------KNLDAVRPVADWAKSSGVKQFLFISS 187
N+ +T D V+ + G N +A R +AD A+ + V +F+F+SS
Sbjct: 55 PMNMAAALTGVDAVVHSAGLAHAMSGAPEDDFRNSNTEATRKLADAAQRARVGRFVFLSS 114
Query: 188 ----AGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSNWASFRPQYMIGSGNN 239
AG PA P E D +P + E+ ++E +W + RP + G+G
Sbjct: 115 IRAQAGSSAPA---PLSEADAPEPTDPYGRSKLAAEEALAETGLDWVALRPVLVYGAGVK 171
Query: 240 KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
+ ++ R P P+P ++A R L S+ +LA
Sbjct: 172 GNMAALL--KLART-PYPLP-----LASLAGRRSLVSVESLA 205
>gi|126178155|ref|YP_001046120.1| NAD-dependent epimerase/dehydratase [Methanoculleus marisnigri JR1]
gi|125860949|gb|ABN56138.1| NAD-dependent epimerase/dehydratase [Methanoculleus marisnigri JR1]
Length = 333
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 130/335 (38%), Gaps = 70/335 (20%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD-KMKK---PPF--------------NR 125
+GG IG ++ + LL GHEV + D D ++KK PF NR
Sbjct: 28 TGGAGFIGSHIIERLLDDGHEVVCLDNFDPYYDPEIKKSNIQPFLENKNFTLEVGDIRNR 87
Query: 126 -------------FNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVAD 172
F+E AG + DP + V T +++ +
Sbjct: 88 DTLTRLLEGTDYVFHEAAQAGVRISVEDPIKPHEVNATGTLNLL---------------E 132
Query: 173 WAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKY---ISENFS-N 224
++ SGVK+ + SS+ +Y + P E +P + E+Y SE +
Sbjct: 133 ASRDSGVKKIINASSSSVYGTVEYLPFDEDHPRRPVSPYGVSKLAAEEYCRVFSELYGLK 192
Query: 225 WASFRPQYMIGSGNNKDCEEWFFDR-IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
S R + G D F R + P+ I G G + + +++D+ +A++
Sbjct: 193 SVSLRYFTVYGPRMRPDLAISIFTRKALANEPITIFGDGTKTRDFTNIKDIVRANLIAMQ 252
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 343
E A +N+ V++ +A+ + G EI + D DA+ H
Sbjct: 253 KGEGA----YNIGGGHRVSIQTLAETIIETTGSSSEIRYADTVKG--DAE--------HT 298
Query: 344 YAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGR 378
+A+ + A+ LGWR +L E L+ R+ +V R
Sbjct: 299 FADTKKAERNLGWRPQVSLEEGLR-RYAAWVSNSR 332
>gi|406964305|gb|EKD90138.1| UDP-glucose 4-epimerase [uncultured bacterium]
Length = 309
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 129/318 (40%), Gaps = 44/318 (13%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
+GG IG +L EL+ GH+V ++ + G+ K + ++ +
Sbjct: 7 TGGAGFIGSHLVDELVNLGHQVIVIDDFSTGNIERLNNSKSKIKILRQSLNQEAALLKKI 66
Query: 141 PAEVGNV--------VGGVTFDVV--LDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
PA + + + + +V L + N++ + +K K+F+F+SS+ +
Sbjct: 67 PAILEDTEFIFHLAALPRIERSIVDPLGTHDANVNGTLVALELSKRLKAKRFIFVSSSSV 126
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS---------FRPQYMIG-----S 236
Y ++ P E + P + + K + E++ + FR + G
Sbjct: 127 YGNQEKLPLTEDLIPNPQNPYA-LHKLLGEHYCRLYAQLYKMPVIVFRLFNVYGPGMFSK 185
Query: 237 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
G+ K + ++I P+ I GSG Q + ++ D L ++ + I NL
Sbjct: 186 GSYKLVFTKWLEQIESNIPLTIFGSGKQTRDFTYIADSIDGLVRGIKLDDKKIFEIINLG 245
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW 356
R + ++ +AKL Y P+ G + K F+ A+ R AK+ILGW
Sbjct: 246 YGRQIEVNYLAKLFNHPT-------QYLPE-RGYEEK----FKQ----ADIRKAKNILGW 289
Query: 357 RSTTNLPEDLKERFEEYV 374
++ + +K ++Y+
Sbjct: 290 EPKISIEKGVKMLLKDYL 307
>gi|398852107|ref|ZP_10608776.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM80]
gi|398244983|gb|EJN30515.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM80]
Length = 309
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 89/230 (38%), Gaps = 31/230 (13%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNR------FNEIVSAG---- 133
+GG IG +L LL GH V I+ D ++ K P + ++ A
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILD--DLSTGKRANLPLDNPKVELIVGDVADAALVAQ 66
Query: 134 ---GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
G + A V +V V D + + N V + + +GVK+ LF SSA +
Sbjct: 67 AMQGCSAVAHLAAVASVQASV--DDPVKTHQSNFIGTLNVCEAMRQAGVKRVLFASSAAV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW---------ASFRPQYMIG-----S 236
Y E ++ D K +K E++ ++ A FR + G S
Sbjct: 125 YGNNGEGASIDEDTPKAPLTPYASDKLAGEHYFDFYRRQHGLEPAIFRFFNIFGPRQDPS 184
Query: 237 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 286
F +R + P+ + G G Q + +V DL +L A+E PE
Sbjct: 185 SPYSGVISIFSERAQKGLPITVFGDGEQTRDFLYVEDLVDVLVQAIEKPE 234
>gi|333980707|ref|YP_004518652.1| UDP-glucose 4-epimerase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333824188|gb|AEG16851.1| UDP-glucose 4-epimerase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 313
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 94/226 (41%), Gaps = 27/226 (11%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 222
N+ + + + +GV++ ++ SSA +Y P E V+P AG+ + K+ E++
Sbjct: 93 NIGGTLHLLEACRRTGVEKVIYASSAAVYGDPLYLPVDEEHPVRPLAGY-GISKHTVEHY 151
Query: 223 ---------SNWASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIA 269
++ R + G + E F R+++ I G G Q +
Sbjct: 152 LEVYRGLYGLDYTVLRYANVYGPRQDATGEGGVVAVFVHRLLQGEAPCIFGDGEQTRDFV 211
Query: 270 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
+V D+++ AV+ S + N+ + RA +++ + +L + G ++ + P+
Sbjct: 212 YVGDVAAANLAAVKK---GSGRVLNVSTGRATSVNDLFQLLQKITGSKIKARYCPPRPGD 268
Query: 330 IDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
I H Y A+ LGW++ T+L L E Y K
Sbjct: 269 I----------RHSYLSCDLARKTLGWQALTDLAAGLNLTVEWYRK 304
>gi|398783802|ref|ZP_10547172.1| putative reductase [Streptomyces auratus AGR0001]
gi|396995709|gb|EJJ06719.1| putative reductase [Streptomyces auratus AGR0001]
Length = 342
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 111/287 (38%), Gaps = 44/287 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG +G + + L G +VT+ F+R N G + GD A+
Sbjct: 22 GGTEFVGRAVTEAALARGWQVTV---------------FHRGNHAPPEGVAALHGDRADA 66
Query: 145 GNVVG--GVTFDVVLDNNGKNLDAVRPVADW-AKSSGVKQFLFISSAGIYK-PADEPPHV 200
+ +D V+D AVR A A+ +G ++ ++SS +Y PA
Sbjct: 67 AGLAALEQGAWDAVVDTWSGAPAAVRDAARLLAERAG--RYAYVSSRSVYAYPAPYGLDE 124
Query: 201 EGDVVKPDAGHVQVEKYIS----------ENFSNWASF-RPQYMIGSGNNKDCEEWFFDR 249
+G +V A E Y + E F + A R ++G N W+ R
Sbjct: 125 DGPLVDGSADATTAEDYAAAKRGGELAAAEAFGDRALLVRAGLILGPYENIGRLPWWLGR 184
Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA-VTLDGMAK 308
I R PV PG VRDL+ A+E+ +NL+S+ T+ + +
Sbjct: 185 IARGGPVLAPGPREAALQYIDVRDLAEWTLGALES---GLGGAYNLLSEPGHATMGELLE 241
Query: 309 LCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNMHFYAEPRAAKD 352
C Q G E+ P+ AAGI+ P+ + + P A+D
Sbjct: 242 SCVQVTGADAELRWTAPEDVLAAGIE-----PWTELPAWLPPGEARD 283
>gi|313892069|ref|ZP_07825667.1| NAD dependent epimerase/dehydratase family protein [Dialister
microaerophilus UPII 345-E]
gi|313119521|gb|EFR42715.1| NAD dependent epimerase/dehydratase family protein [Dialister
microaerophilus UPII 345-E]
Length = 306
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 103/274 (37%), Gaps = 52/274 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFN-----EIVSAGGKTVW 138
+GG IG +LA L+ H VTI+ D + +FN E + A +T
Sbjct: 6 TGGAGFIGSHLADALIKLNHNVTII-------DNLSSGT--KFNVPSEAEFIEADIRT-- 54
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQF 182
+ + N+ FD+V + N+ + V + + +GVK+
Sbjct: 55 ---SSIANIFKNHKFDLVFHEAAQTLVPESIKNPYKDADENIMGLINVLESCRQTGVKKI 111
Query: 183 LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN--WASFRPQYMI------ 234
+F SSA +Y P E + + P + + + K SE + N + F Y I
Sbjct: 112 IFSSSAAVYGNNSNLPLSENESLSPTSFY-GLTKTTSEKYLNLYFEYFGIHYTILRYSNV 170
Query: 235 -----GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
G+ F + +P+ I G G Q + V D+ A+ N +
Sbjct: 171 YGPRQGANGEGGVIYIFAKALAENKPINIFGDGNQTRDFISVHDIVEANIAAITN---GN 227
Query: 290 SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY 323
I N+ ++ TL+ +A + ++HY
Sbjct: 228 EKILNISTETETTLNELANKMINLSKKDKNLIHY 261
>gi|320333142|ref|YP_004169853.1| NAD-dependent epimerase/dehydratase [Deinococcus maricopensis DSM
21211]
gi|319754431|gb|ADV66188.1| NAD-dependent epimerase/dehydratase [Deinococcus maricopensis DSM
21211]
Length = 323
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 94/250 (37%), Gaps = 39/250 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVSAGGKTVWGDP 141
GG +G ++ LL GH VT T G D+ +++++ +R N +SA W
Sbjct: 7 GGTQFVGRHIVLTLLARGHHVTTFTRGRTPDDLPEQVERLHGDR-NADLSALADGSW--- 62
Query: 142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE 201
D +D + VR V D A V ++ FIS+ +Y P E
Sbjct: 63 ------------DACVDVSAYTPQQVRAVGD-ALQGRVGRYAFISTISVYADFSRGPITE 109
Query: 202 GDVVK----PDAGHVQVEKY----------ISENFSNWAS-FRPQYMIGSGNNKDCEEWF 246
+ PD V E Y F + A+ RP + G ++ + +
Sbjct: 110 DARLHEPPAPDVQTVTGETYGPLKVACEHEALRAFGDRATILRPDIVAGPFDHTERYTTW 169
Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
R+ P+ PG G + RDL+ L +E + +FN+V +T
Sbjct: 170 VRRVATGGPMLAPGDGRADVQVIDARDLAEFTALTLEQ---DTPGVFNVVGPH-LTWSAF 225
Query: 307 AKLCAQAAGL 316
AQA G+
Sbjct: 226 LDTLAQATGV 235
>gi|423396476|ref|ZP_17373677.1| hypothetical protein ICU_02170 [Bacillus cereus BAG2X1-1]
gi|401651783|gb|EJS69344.1| hypothetical protein ICU_02170 [Bacillus cereus BAG2X1-1]
Length = 341
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 108/272 (39%), Gaps = 45/272 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G N F E+ G
Sbjct: 2 KILIL----GGTRFLGRAFVEEALNGGHEVTLFNRGTNNE---------IFPEVEQLIGD 48
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + N +DVV+D G + +R V + K + VK ++FISS +YK
Sbjct: 49 RN-GDVLSLEN----RKWDVVVDTCGFSPHHIRNVGEVLKDN-VKHYIFISSLSVYKDWI 102
Query: 196 EPPHVEGD-VVKPDAGHVQVEKYISENFSNWASF----------------------RPQY 232
P H++ D +++P+ Q++ + S + + R
Sbjct: 103 -PHHIKEDYILQPEPTGEQIKAVENGEISPYEHYGALKVLCEKEAEKYWPGRVLHVRAGL 161
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G + D ++ RI + V +PG + ++D++S EN + + NI
Sbjct: 162 LSGMFDYTDRLPYWVQRIAKGGKVLVPGRKDRPVQFVDIKDVASFGLNMAENNKVGTFNI 221
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
+ +T++ + C + E V D
Sbjct: 222 TG--PNYEMTMEELLNTCKKVTNSDAEFVWID 251
>gi|322703159|gb|EFY94773.1| reductase [Metarhizium anisopliae ARSEF 23]
Length = 322
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 93/227 (40%), Gaps = 45/227 (19%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG G + A+E + GH+VT+ FNR AG
Sbjct: 2 KMLIL----GGTKFAGLHTAREAVSKGHDVTL---------------FNRGTRPPPAGVT 42
Query: 136 TVWGDPAEVGNV--VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK- 192
+ GD + G+ FDV +D + AV+ D A V+ +++IS+ +Y
Sbjct: 43 SKLGDRLAPNGYASLAGLAFDVAIDTWSSDPAAVQSAVD-ALGPRVRHYIYISTISVYDF 101
Query: 193 -----PADE--PPHVEGDVVKPDAGHVQVEKYISENFSNWAS-----FRPQYMIGSGNNK 240
P DE P GD D +++ +K E + A RP ++G
Sbjct: 102 KRGAVPHDESTPSWDPGDT---DVPYIR-DKLAGEAIVSGAGPAHTLIRPGVILGPEEWV 157
Query: 241 DCEEWFFDRIVRKRPVPIPG---SGMQFTNIAHVRDLSSMLTLAVEN 284
W+ R+ R PG SG+QF + VRDL++ LA E
Sbjct: 158 WRLPWWLLRMERGGRTLAPGPRASGLQFID---VRDLAAFTVLAAEK 201
>gi|296270279|ref|YP_003652911.1| NAD-dependent epimerase/dehydratase [Thermobispora bispora DSM
43833]
gi|296093066|gb|ADG89018.1| NAD-dependent epimerase/dehydratase [Thermobispora bispora DSM
43833]
Length = 337
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 102/272 (37%), Gaps = 50/272 (18%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++LI+ GG +G + E L GH VT FNR V G
Sbjct: 2 RLLII----GGGIFLGRAIVAEALARGHRVTT---------------FNRGRTGVDLPGT 42
Query: 136 TVW-GD---PAEVGNVVGGVTFDVVLDNNGKN----LDAVRPVADWAKSSGVKQFLFISS 187
T+ GD PA++ + +D V+D G L++VR + S + FISS
Sbjct: 43 TIIRGDREVPADLDRLAAAGPWDAVIDVCGYTPRIVLESVRRL-----SGRAGHYTFISS 97
Query: 188 AGIYKPADEPPHVEGDVVK----PDAGH---------VQVEKYISENFSNWASF--RPQY 232
Y+ P ++ + PDAG E+ + E+F A+ RP
Sbjct: 98 VSAYRDWPMTPGIDESSPRFDCPPDAGEEYGEYGVLKAGCERAVEEHFRG-ATLVIRPGL 156
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
++G +N W+ RI R V PG + + RD+++ VE A
Sbjct: 157 IVGPNDNIGRLPWWLTRIARGGRVLAPGDPDRPLQLIDARDIAAFTVDQVERGTAGRFLT 216
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
+ + T G+ C + G E V D
Sbjct: 217 GGVPGN--TTFGGLLADCLEITGSGAEPVWVD 246
>gi|428206243|ref|YP_007090596.1| NAD-dependent epimerase/dehydratase [Chroococcidiopsis thermalis
PCC 7203]
gi|428008164|gb|AFY86727.1| NAD-dependent epimerase/dehydratase [Chroococcidiopsis thermalis
PCC 7203]
Length = 325
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 68/134 (50%), Gaps = 18/134 (13%)
Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYI----SENFSNWAS 227
++GVK+F+F+SS G + + P E +PD + +Q E+ I S++ W
Sbjct: 105 AAGVKRFVFVSSIGAMTSSSDRPLTESSPCQPDTPYGRSKLQAEQAIVQLASQSAMTWTI 164
Query: 228 FRPQYMIGSGNNKDCEEWFFDRIVR--KRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVEN 284
RP + G+GN + E R+++ + +P+P G+ ++ +V +L + + +
Sbjct: 165 LRPPLVYGAGNPGNME-----RLIKLVQTGLPLPFGAVKNRRSLIYVGNLVDAIASTLNH 219
Query: 285 PEAASSNIFNLVSD 298
P+AA+ LVSD
Sbjct: 220 PQAANQTF--LVSD 231
>gi|288817824|ref|YP_003432171.1| NADH dehydrogenase [Hydrogenobacter thermophilus TK-6]
gi|384128585|ref|YP_005511198.1| NAD-dependent epimerase/dehydratase [Hydrogenobacter thermophilus
TK-6]
gi|288787223|dbj|BAI68970.1| NADH dehydrogenase [Hydrogenobacter thermophilus TK-6]
gi|308751422|gb|ADO44905.1| NAD-dependent epimerase/dehydratase [Hydrogenobacter thermophilus
TK-6]
Length = 313
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 99/250 (39%), Gaps = 48/250 (19%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS---- 131
KVLI +G +G Y+ K LL G EV + N DK+++ + E V
Sbjct: 2 KVLI----TGSTGFVGRYMVKALLNEGFEVASIV---RNLDKLRR----LYGEKVKGYEG 50
Query: 132 -----AGGKTVWGD--PAEVGNVVG--------GVTFDVVLDNNGKNLDAVRPVADWAKS 176
A + + D P + +++G G+TF V KNL V AK
Sbjct: 51 NFEDKASIRKAFEDFKPDYLIHLIGILYEEKSKGITFHKVHYIYSKNLYQV------AKE 104
Query: 177 SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS 236
+K+ L +S+ G +K A H Q E+ + + N+ FRP ++G
Sbjct: 105 FDIKKVLHMSALGTHKNAPSSYH---------KTKYQTEQELIKTGLNYTIFRPSIILGP 155
Query: 237 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
+ W R + R + +P G VRD+ A+++ E + I+ +
Sbjct: 156 EQRLFFDMWSITRYL--RVIALPSGGHYLFQPVDVRDVVCCFLKAIKS-EETNGKIYEVC 212
Query: 297 SDRAVTLDGM 306
D+ V+ +
Sbjct: 213 GDKKVSFKKL 222
>gi|427702489|ref|YP_007045711.1| nucleoside-diphosphate-sugar epimerase [Cyanobium gracile PCC 6307]
gi|427345657|gb|AFY28370.1| nucleoside-diphosphate-sugar epimerase [Cyanobium gracile PCC 6307]
Length = 322
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 129/340 (37%), Gaps = 72/340 (21%)
Query: 78 LIVNTN-----SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF------NRF 126
++++TN +G + G +A+ L GH ++ V + D M P R
Sbjct: 1 MLISTNDRIFIAGHRGMAGSAIARRLEAEGHR-HLLCVSRSDLDLMDGPAVAAWFGDQRP 59
Query: 127 NEIVSAGGKTVWGDPAEVGNVVGGVTF--DVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
+ +V A A VG ++ T+ D +LDN L + V + A G ++ LF
Sbjct: 60 DVVVLAA--------ARVGGILANSTYPADFLLDN----LKIQQNVIESAWQHGTRRLLF 107
Query: 185 ISSAGIY-KPADEPPHVE---GDVVKPDAGHVQVEKYIS---------ENFSNWASFRPQ 231
+ S+ IY K A++P E G ++P + K ++ + S P
Sbjct: 108 LGSSCIYPKLAEQPIREEALLGGPLEPTNEWYAIAKITGIELCRALRLQHGFDAISLMPT 167
Query: 232 YMIGSGNNKD-CEEWFFDRIVRK---------RPVPIPGSGMQFTNIAHVRDLS--SMLT 279
+ G G+N ++R+ V GSG HV DL+ ++
Sbjct: 168 NLYGPGDNYHPTNSHVLPGLIRRFQEARENGTEEVVCWGSGSPRREFLHVDDLADAALFC 227
Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
L P A N+ + V++ +A + A+A G I K G
Sbjct: 228 LRHWQPGAEELQHINVGTGTDVSIKDLATMVAEAVGFRGRIAWDTSKPDGT--------- 278
Query: 340 NMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEEYV 374
PR D+ LGWR+T LP+ L+ E+V
Sbjct: 279 -------PRKLLDVGRLAALGWRATIPLPDGLRRTVAEFV 311
>gi|406578011|ref|ZP_11053575.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Streptococcus sp.
GMD6S]
gi|406586615|ref|ZP_11061542.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Streptococcus sp.
GMD1S]
gi|419814697|ref|ZP_14339458.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Streptococcus sp.
GMD2S]
gi|419817157|ref|ZP_14341325.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Streptococcus sp.
GMD4S]
gi|404458720|gb|EKA05127.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Streptococcus sp.
GMD6S]
gi|404466287|gb|EKA11631.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Streptococcus sp.
GMD4S]
gi|404471402|gb|EKA15939.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Streptococcus sp.
GMD2S]
gi|404473867|gb|EKA18191.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Streptococcus sp.
GMD1S]
Length = 326
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 138/351 (39%), Gaps = 77/351 (21%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGD--ENS-------DKMKKP 121
KKVL+ +G +G Y+ +EL G++V VG ENS D K+
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQQGYQVRAFGRNRNVGQSLENSSVAFFQGDLTKQE 57
Query: 122 PFNR----FNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
R + +V AG TVWG P E D N+ + V D +
Sbjct: 58 DLARVCQGMDMVVHAGALSTVWG-PWE--------------DFYQTNVLGTKYVLDACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+ + + +++SS IY P D+ E + + + YI ++ F
Sbjct: 103 ADILRLVYVSSPSIYAAPRDQLAIKESAAPQEN----NLNNYIRSKLASEKLFKDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 159 SIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAFPFRNMHF 343
P+ AS ++N+ + + + + G P+ P + I + F ++ +
Sbjct: 217 PQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPITYRKVPAPLLSVIASSLEFLYKVLKL 275
Query: 344 YAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 375
EP +A +D LG+R ++ E +++ ++Y K
Sbjct: 276 KGEPPLTRYTYYLLRYSQTLDISKAERD-LGYRPQISISEGIEQYVQDYRK 325
>gi|418721930|ref|ZP_13281101.1| NADH(P)-binding protein, PF13460 family [Leptospira borgpetersenii
str. UI 09149]
gi|410741240|gb|EKQ89996.1| NADH(P)-binding protein, PF13460 family [Leptospira borgpetersenii
str. UI 09149]
Length = 311
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 102/233 (43%), Gaps = 38/233 (16%)
Query: 159 NNGK--NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ--- 213
N GK NLDA RP+ + +K VK+F++ SS+ +Y DEP E ++P + +
Sbjct: 72 NLGKSINLDAFRPLVEISKKHAVKRFIYASSSSVYGIKDEPNVTEDFSLEPLTDYSKFKA 131
Query: 214 -----VEKYISENFSNWASFRPQYMIGSGNNKDCE---EWFFDRIVRKRPVPIPGSGMQF 265
+ +Y +++F+ + RP + G + + + KR + + G
Sbjct: 132 DCEKILNEYQTDHFTT-VTIRPATVCGYSPRQRLDVVVNILTNLAYHKREISVFGGAQLR 190
Query: 266 TNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY- 323
NI H+ D+ + + + P E + I+N T+ +A + + G V++V
Sbjct: 191 PNI-HIDDMVDVYLVLLRAPKEKIAGEIYN-AGYLNFTVSEIANMVKEVVGEDVKLVTTP 248
Query: 324 --DPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLP---EDLKERFE 371
D ++ I + K + + LG+R+ ++ EDLK+ F+
Sbjct: 249 TNDNRSYHISSDKIY---------------NQLGFRANRSIKLAVEDLKKAFD 286
>gi|423387511|ref|ZP_17364764.1| hypothetical protein ICE_05254 [Bacillus cereus BAG1X1-2]
gi|401628363|gb|EJS46208.1| hypothetical protein ICE_05254 [Bacillus cereus BAG1X1-2]
Length = 307
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 109/273 (39%), Gaps = 25/273 (9%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
GG IG ++ KELL G+EV I DK K F EI T+ + V
Sbjct: 7 GGSGFIGKHVTKELLARGYEVVIF-------DKFKPSIDVPFKEIDILDIATLRENLINV 59
Query: 145 GNVVGGVTFDVVLDN---NGK-----NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE 196
V+ V +DN N + N + + + +G+++ LF SS+ +Y
Sbjct: 60 DGVIHLAAL-VGVDNCRLNEEDVVRVNFEGTKNIVQICNENGIEKLLFSSSSEVYGDGVS 118
Query: 197 PPHVEGDVVKPDAGH----VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
P E D+ P + + + E Y+ E S+ R ++ + + + ++
Sbjct: 119 VPFKENDIKIPKSAYGKAKLMSEDYLKEYASDSLKVRVVRYFNVYGSQQNDNFVISKFLK 178
Query: 253 K----RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
+ + I G G Q +++ D+ + LA E E FN+ +++ ++++ +A
Sbjct: 179 QAHSGEDITIYGDGQQIRCFSYISDIVNGTILAFE-YEGEKFADFNVGNNKPISMEELAI 237
Query: 309 LCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 341
+ G +I D G+ FR +
Sbjct: 238 KINELMGNKSKIKFLDLGEEGVRNSSIEIFRRI 270
>gi|406672432|ref|ZP_11079657.1| hypothetical protein HMPREF9700_00199 [Bergeyella zoohelcum CCUG
30536]
gi|405586976|gb|EKB60704.1| hypothetical protein HMPREF9700_00199 [Bergeyella zoohelcum CCUG
30536]
Length = 331
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 28/219 (12%)
Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN-------WA 226
A+ +GVK+ ++ +S+ Y + P VE + KP + + + KY++E +++ +
Sbjct: 115 ARDTGVKRLVYAASSSTYGDSKSLPKVEDVIGKPLSPYA-ITKYVNELYADVFKRTYDFD 173
Query: 227 SFRPQYMIGSGNNKDCEEW-------FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 279
+ +Y G +D + F +++ + I G G + ++ ++ M
Sbjct: 174 TIGLRYFNVFGRRQDPKGAYAAVIPKFVIQLMNHKSPTINGDGTYSRDFTYIDNVIQMNL 233
Query: 280 LAV--ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP 337
LA+ ENP+A + V DR T+ M +L L + YDPK A ++ P
Sbjct: 234 LAITSENPDALNQVYNTAVGDRT-TIKDMTEL------LKKYLSEYDPKIAEVEILHG-P 285
Query: 338 FRNM---HFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 373
R H A A+ LG++ T E LKE + Y
Sbjct: 286 NRQGDVPHSLASIEKAQKNLGYQPTHKFAEGLKEAVDWY 324
>gi|423551225|ref|ZP_17527552.1| hypothetical protein IGW_01856 [Bacillus cereus ISP3191]
gi|401188558|gb|EJQ95626.1| hypothetical protein IGW_01856 [Bacillus cereus ISP3191]
Length = 340
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 114/273 (41%), Gaps = 47/273 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G + F +++ G +
Sbjct: 2 KILIL----GGTRFLGRAFVEEALQRGHEVTLFNRG------TNQEIFLEVEQLI--GDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + N +DVV+D G + +R V + K + ++ ++FISS IYK
Sbjct: 50 N--GDVSSLEN----RKWDVVIDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSIYKDWI 102
Query: 196 EPPHVEGD-VVKPDAGHVQVEKYISENFSNWASF----------------------RPQY 232
P H++ D +++P+ Q++ + S + + R
Sbjct: 103 -PHHIKEDYILQPEPTKEQIKAVENGEISPYEHYGALKVLCEKEAEEYWPRRVLHVRAGL 161
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G + D ++ +R+ + V +PG + I ++D+++ EN A I
Sbjct: 162 LSGMFDYTDRLPYWIERVAKGGKVLVPGRKTRPVQIVDIKDVANWGLNMAENKNAG---I 218
Query: 293 FNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYD 324
FN+ + +T++ + C + E V D
Sbjct: 219 FNVTGPNYDLTMEELLNTCKKVTHSDAEFVWVD 251
>gi|423559305|ref|ZP_17535607.1| hypothetical protein II3_04509 [Bacillus cereus MC67]
gi|401188772|gb|EJQ95833.1| hypothetical protein II3_04509 [Bacillus cereus MC67]
Length = 341
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 110/272 (40%), Gaps = 45/272 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G K F +++
Sbjct: 2 KILIL----GGTRFLGRAFVEEALNRGHEVTLFNRG------TNKEIFPEVEQLI----- 46
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + +DVV+D G + +R V + K + ++ ++FISS +YK
Sbjct: 47 ---GDRNNDVSSLKNRKWDVVIDTCGFSPHHIRNVGEVLKDN-IEHYIFISSISVYKDWI 102
Query: 196 EPPHVEGD-VVKPDAGHVQVEKYISENFSNWASF----------------------RPQY 232
P H++ D +++P+ Q++ + S + + R
Sbjct: 103 -PHHIKEDYILQPEPTSDQIKAVENGEISPYEHYGALKVLCEKEAEKYWPGHVLHVRAGL 161
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G + D ++ R+ + V +PG + + ++D++S EN +A + NI
Sbjct: 162 LSGVFDYTDRLPYWIQRVAKGGKVLVPGRKDRPVQLVDIKDVASFGLNMAENNKAGTFNI 221
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
+ +T++ + C + E V D
Sbjct: 222 TG--PNDELTMEELLNTCKKVTNSDAEFVWVD 251
>gi|251796752|ref|YP_003011483.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. JDR-2]
gi|247544378|gb|ACT01397.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. JDR-2]
Length = 337
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 92/238 (38%), Gaps = 34/238 (14%)
Query: 123 FNRFNE--IVSAGGKTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS 177
FNR N V G K + GD P + FDVV+D + V+ D +
Sbjct: 30 FNRGNRDGFVPEGAKIITGDIRDPESAAAALEDYQFDVVVDWIAFTPEHVQTDIDLFRGR 89
Query: 178 GVKQFLFISSAGIY-KPAD-----------EPPHVEGDVVKPDAGHVQVEKYISENFSNW 225
KQ++FISSA Y KP E P+ + K D + +++Y + F
Sbjct: 90 -TKQYIFISSASAYQKPLQHYIITEHATPLENPYWQYSRDKIDCEQLLMKEYAATGFPV- 147
Query: 226 ASFRPQYMIG------SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 279
RP + G S N+ R+ +P+ + G G + H D +
Sbjct: 148 TIVRPSFTYGDTMIPASLNSWSHPYSLVARMREGKPIIVHGDGTSLWTMTHNSDFAKGF- 206
Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH--------YDPKAAG 329
+ + + A +++ SD +T + + + AAG+ +VH YDP G
Sbjct: 207 VGLLGEQTAIGEAYHITSDEVLTWNQIYEAIGSAAGVKPNLVHISSEFLITYDPDLEG 264
>gi|393767323|ref|ZP_10355872.1| NAD-dependent epimerase/dehydratase [Methylobacterium sp. GXF4]
gi|392727224|gb|EIZ84540.1| NAD-dependent epimerase/dehydratase [Methylobacterium sp. GXF4]
Length = 306
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 158 DNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV-EGDVVKPDAGH----V 212
D N +A R +A+ A + V++F+F+SS A P V EGD +P + +
Sbjct: 84 DYRTLNTEATRKLAEAAARAKVRRFVFLSSIRAQVGASAPGVVGEGDEPRPTDAYGRSKL 143
Query: 213 QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM 263
+ E+ ++E +W + RP + G+G + R+ R P P+P G+
Sbjct: 144 EAERALAETGLDWVALRPVLVYGAGVKGNMAALL--RLARS-PYPLPLGGL 191
>gi|301060431|ref|ZP_07201290.1| NAD dependent epimerase/dehydratase family protein [delta
proteobacterium NaphS2]
gi|300445485|gb|EFK09391.1| NAD dependent epimerase/dehydratase family protein [delta
proteobacterium NaphS2]
Length = 312
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 119/289 (41%), Gaps = 43/289 (14%)
Query: 123 FNRFNEIVSAGGKT-VWGDPAEVGNVVGG---VTFDVVLDNNGKNLDAVRPVADWAKS-- 176
FNR + ++ G T + GD +V G + + V+D G++ AD AK
Sbjct: 32 FNRGHVPLNMAGVTEIVGDRRNEAEIVKGMPLLDWHAVIDFCGES------DADLAKMLE 85
Query: 177 ---SGVKQFLFISSAGIYK-----PADE------PPHVEGDVVKPDAGHVQVEKYISE-- 220
+ +++IS+ IY+ P +E P +E + P A K++ E
Sbjct: 86 FLPGKIDHYIYISTTSIYENTTNLPVNEDAPKLSAPQLE---LGPLAADYAFNKWLCERK 142
Query: 221 -NFSN------WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD 273
F + RP + G N E +FFD I PV +P + + N +V D
Sbjct: 143 LQFECPRRGIAYTCLRPVIIYGPYNYAPRETYFFDLISNNEPVIVPDNDLPLFNFLYVVD 202
Query: 274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD-PKAAGIDA 332
L+ ++ + N + + FN+ S++ V+ G+ + + + I P+
Sbjct: 203 LAKIIQECIGNRDVFNQA-FNVCSEQLVSYQGLMDVFEKVCSKKISIRKLSVPEIEKRQI 261
Query: 333 KKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKK 381
FP + Y+ + + +LG+ T+ ED + +Y ++ +D K
Sbjct: 262 PLPFPLDSHLVYSGTKLQR-LLGFEYTS--VEDGMKATYDYYRLVQDAK 307
>gi|46389927|dbj|BAD15711.1| unknown protein [Oryza sativa Japonica Group]
Length = 72
Score = 45.8 bits (107), Expect = 0.040, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 7/41 (17%)
Query: 233 MIGSGNNKDCEEWFFDRIVRKRP------VPIPGSGMQFTN 267
MIGSGNNKDCEEWFFD + + P +P P + + F+N
Sbjct: 1 MIGSGNNKDCEEWFFDSKITQIPPTKFSQIPYPHTKI-FSN 40
>gi|398344858|ref|ZP_10529561.1| UDP-glucose 4-epimerase [Leptospira inadai serovar Lyme str. 10]
Length = 330
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 27/235 (11%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIY---------KPADEPPHVEGDVVKPDAGHVQ 213
NLDA RP+ + +K SG K+F++ SS+ +Y + + P + K D +
Sbjct: 97 NLDAFRPLVEISKKSGAKRFIYASSSSVYGIKEVQNVTEDFELEPLTDYSKFKADCEKIL 156
Query: 214 VEKYISENFSNWASFRPQYMIGSGNNKDCE---EWFFDRIVRKRPVPIPGSGMQFTNIAH 270
E Y S++F+ + RP + G + + + KR + + G NI H
Sbjct: 157 AE-YQSDDFTT-VTIRPATVCGYSPRQRLDVVVNILTNLAYHKREISVFGGSQLRPNI-H 213
Query: 271 VRDLSSMLTLAVENP-EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY---DPK 326
+ D+ + ++ P E + ++FN L+ +A + +A G V+++ D +
Sbjct: 214 IADMVEAYLVLLKAPKEKIAGDVFNAGYQNHTVLE-IATMVKEAVGDDVKLITTPTNDNR 272
Query: 327 AAGIDAKKAFP---FRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGR 378
+ + ++K F FR H E A +D+ LP+ L E Y I R
Sbjct: 273 SYHVSSEKFFKVLGFRANHSIKE--AVEDLKKAFDANLLPDSLTN--ERYFNIKR 323
>gi|423436549|ref|ZP_17413530.1| hypothetical protein IE9_02730 [Bacillus cereus BAG4X12-1]
gi|401122285|gb|EJQ30072.1| hypothetical protein IE9_02730 [Bacillus cereus BAG4X12-1]
Length = 341
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 108/273 (39%), Gaps = 47/273 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G E L GHE+T+ G K F+ ++
Sbjct: 2 KILIL----GGTRFLGRAFVDEALQRGHEITLFNRG------TNKEIFSNVEQLT----- 46
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + T+DVV+D G + +R V + K + ++ ++FISS +YK D
Sbjct: 47 ---GDRNNDVSSLKNRTWDVVIDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSVYK--D 100
Query: 196 EPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF----------------------RPQ 231
PH E +++P+ Q++ + S + + R
Sbjct: 101 WIPHDIKEDYILQPEPTEEQIKTVENGEISPYEHYGALKVLCEKEAEKYWPGRVLHVRAG 160
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G + D ++ R+ + V +PG + I ++D++ EN +A + N
Sbjct: 161 LLSGMFDYTDRLPYWIQRVAKGGNVLVPGRKNRPVQIVDIKDVARFGLNMAENNKAGTFN 220
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
I + +T++ + C + E V D
Sbjct: 221 ITG--PNDELTMEELLNTCKKVTNSDAEFVWVD 251
>gi|334319879|ref|YP_004556508.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti AK83]
gi|334097618|gb|AEG55628.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti AK83]
Length = 368
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 10/114 (8%)
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
G Q + HVRD++ LA+E P AA ++ N+ S A + +A L A+A G+P EI
Sbjct: 243 GRQKRDFVHVRDVARAFRLALEQPHAA-GHVINIGSGNAYAIADIASLLAEAMGVP-EI- 299
Query: 322 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
+P+ ++ ++ RN +A+ A+D+LG+ L + L + F ++V+
Sbjct: 300 --EPEI--MNKARSGDIRNC--FADIAKARDLLGFEPAHRLEDSLAD-FAQWVR 346
>gi|148545786|ref|YP_001265888.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida F1]
gi|148509844|gb|ABQ76704.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida F1]
Length = 310
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 32/250 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD 140
+GG IG +L LL G+ V I+ + G ++ ++ P V+ G
Sbjct: 9 TGGAGFIGSHLCDALLDKGYAVRILDDFSTGRRSNLQVDHPRLELIEGDVADAGLVTQAA 68
Query: 141 P--------AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
A V +V V V + N V + + GV++ LF SSA +Y
Sbjct: 69 AGCRAVVHLAAVASVQASVEDPV--RTHQSNFIGTLNVCEAMRVHGVRRVLFASSAAVYG 126
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD-- 241
E + D K V+K SE + ++ +R Q+ + G +D
Sbjct: 127 NNGEGESISEDTPKAPLTPYAVDKLASEQYLDF--YRRQHGLEPVVFRFFNIFGPRQDPS 184
Query: 242 -----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
F +R+V+ P+ + G G Q + +V DL ++ A+E P+ + N+
Sbjct: 185 SPYSGVISIFCERVVQGLPITVFGDGEQTRDFLYVGDLVQVMVQALEQPQVEEGAV-NIG 243
Query: 297 SDRAVTLDGM 306
++A +L+ +
Sbjct: 244 LNQATSLNQL 253
>gi|418244263|ref|ZP_12870686.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum ATCC 14067]
gi|354511669|gb|EHE84575.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum ATCC 14067]
Length = 329
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 118/324 (36%), Gaps = 83/324 (25%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTI-----------------MTVGDENSDKMKKPPFNRF 126
+GG +G A LL GH+VTI + GD N + F
Sbjct: 6 TGGAGYVGSVAAAVLLEHGHDVTIIDNFSTGNREAVPADARLIEGDVNDVVEEVLSEGGF 65
Query: 127 NEIVSAGGKTVWGDPAEV------GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK 180
+V +++ G+ E NVV +T LDA+R + GV
Sbjct: 66 EGVVHFAARSLVGESVEKPNEYWHDNVVTALTL----------LDAMRAL-------GVH 108
Query: 181 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQY 232
+F S+A Y D P E +P + + I +++A S R
Sbjct: 109 NLVFSSTAATYGEPDVVPITEDMPTQPTNAYGATKLSIDYAITSYAAAFGLAATSLRYFN 168
Query: 233 MIGS----GNNKDCEEWFFDRIV------RKR--------PVPIPGSGMQFTNIAHVRDL 274
+ G+ G N++ E ++ R++ P P G + H+ DL
Sbjct: 169 VAGAYGNIGENREVETHLIPLVLQVATGHREKIFMFGDDWPTP---DGTAVRDYIHILDL 225
Query: 275 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG--LPVEIVHYDPKAAGIDA 332
+ LA+E+ EA IFNL S ++ + ++C + G +P E+ P+ AG A
Sbjct: 226 AKAHVLALESNEAGKHRIFNLGSGDGYSVKQVVEMCREVTGHPIPAEVA---PRRAGDPA 282
Query: 333 KKAFPFRNMHFYAEPRAAKDILGW 356
A AK LGW
Sbjct: 283 T---------LIASSEKAKQELGW 297
>gi|334342154|ref|YP_004547134.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum ruminis DSM
2154]
gi|334093508|gb|AEG61848.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum ruminis DSM
2154]
Length = 308
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 133/316 (42%), Gaps = 38/316 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIVSAGGKTVWG- 139
+GG IG ++ + LL +GHE ++ + G + P + +I++ V+
Sbjct: 8 TGGAGFIGSHIVENLLEAGHEALVVDNFSTGRRENLITGVPVYEM--DIINPEITEVFRR 65
Query: 140 -DPAEVGNVVGGVTF-----DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
P V + V D VLD N+ + + ++ GV + +F SSA +Y
Sbjct: 66 VQPEAVIHQAAQVAVPVSLKDPVLDAQ-VNIIGTLNLLEACRTHGVAKVIFASSAAVYGN 124
Query: 194 ADEPPHVEGDVVKPDAGH----VQVEKYIS---ENFS-NWASFRPQYMIGSGNNKDCE-- 243
P E V P +G+ VEKY+ E + W + R + G + E
Sbjct: 125 PAYLPVDEQHPVGPLSGYGVSKHAVEKYLEVYRELYGLKWTALRYANVYGPRQDALGEGG 184
Query: 244 --EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
F +++++ + I G G Q + +V+D+++ A+ + +FN+ + +A
Sbjct: 185 VVAIFINKLLQNQCPVIFGDGEQTRDFVYVKDVAAANVRALT---FGDNRLFNISTGKAS 241
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTN 361
T++ + L QA G + + P++ I +H Y + + A L W
Sbjct: 242 TVNELLLLLQQAIGSSLLGEYGPPRSGDI----------LHSYLDQQRAAVELDWVPRYA 291
Query: 362 LPEDLKERFEEYVKIG 377
L + +KE E Y+K G
Sbjct: 292 LDQGIKETVEFYLKGG 307
>gi|219852721|ref|YP_002467153.1| NAD-dependent epimerase/dehydratase [Methanosphaerula palustris
E1-9c]
gi|219546980|gb|ACL17430.1| NAD-dependent epimerase/dehydratase [Methanosphaerula palustris
E1-9c]
Length = 304
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 19/203 (9%)
Query: 160 NGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS 219
N N+ V A+ GVK+ +F SS+ +Y P E P + + V K
Sbjct: 88 NEVNIGGTLNVLMAARDQGVKKIMFASSSSVYGDTPTLPKRESMTPAPMSPYA-VTKLTG 146
Query: 220 ENFSN-WASFRP------QYMIGSGNNKDCEEW-------FFDRIVRKRPVPIPGSGMQF 265
E++ N ++S +Y G +D + F +I+ I G G Q
Sbjct: 147 EHYFNVFSSLYGLKMTCLRYFNVFGPRQDPKSQYAAVIPNFITKILNHESPIIHGDGEQT 206
Query: 266 TNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDP 325
+ +RD+ LA+ E++S IFN+ DR V+L+ +A + G E+++ P
Sbjct: 207 RDFTFIRDVVHANILAM---ESSSEGIFNIACDRRVSLNVLADQIMEIIGERRELIYDAP 263
Query: 326 KAAGI-DAKKAFPFRNMHFYAEP 347
++ + D+ + H EP
Sbjct: 264 RSGDVRDSLADYTLAKEHLNYEP 286
>gi|418400949|ref|ZP_12974484.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti CCNWSX0020]
gi|359505056|gb|EHK77583.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti CCNWSX0020]
Length = 368
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 10/114 (8%)
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
G Q + HVRD++ LA+E P AA ++ N+ S A + +A L A+A G+P EI
Sbjct: 243 GRQKRDFVHVRDVARAFRLALEQPHAA-GHVINIGSGNAYAIADIASLLAEAMGVP-EI- 299
Query: 322 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
+P+ ++ ++ RN +A+ A+D+LG+ L + L + F ++V+
Sbjct: 300 --EPEI--MNKARSGDIRNC--FADIAKARDLLGFEPIHRLEDSLAD-FAQWVR 346
>gi|261409114|ref|YP_003245355.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. Y412MC10]
gi|261285577|gb|ACX67548.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. Y412MC10]
Length = 319
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 123/322 (38%), Gaps = 55/322 (17%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G + + L G+ ++T + D ++ RF S G + V+ A+
Sbjct: 10 AGHRGLVGSAIVRALELQGYR-NLVTRTSQELDLRERDRVERF--FSSEGIEYVFLAAAK 66
Query: 144 VGNVVGGVTF--DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEP--- 197
VG ++ + D + DN L + D + GVK+ LF+ S IY K A +P
Sbjct: 67 VGGIIANRDYPADFIRDN----LLIQNNIIDLSYRYGVKKLLFLGSTCIYPKLAPQPMKE 122
Query: 198 ---------PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFF 247
P E V AG + Y + + + S P + G +N D E
Sbjct: 123 EYLMTGALEPTNEPYAVAKIAGITMCQSYNRQYGTRFISAMPTNLYGPNDNYDLETSHVL 182
Query: 248 DRIVRK---------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
++RK R V I G+G + DL+ +++ E + I N+
Sbjct: 183 PALLRKIHEAKETGQREVEIWGTGQPKREFLYADDLADACLFLMKHYE--ENTIVNIGCG 240
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI----- 353
V++ +A+ A G V+ K G PR D+
Sbjct: 241 EDVSIRELAESIASTVGYDGSFVYNASKPDGT----------------PRKLVDVSKLTA 284
Query: 354 LGWRSTTNLPEDLKERFEEYVK 375
LGW+ + +L + L +E Y++
Sbjct: 285 LGWKPSISLEQGLARTYEHYLE 306
>gi|381186251|ref|ZP_09893823.1| GDP-L-fucose synthetase [Flavobacterium frigoris PS1]
gi|379651686|gb|EIA10249.1| GDP-L-fucose synthetase [Flavobacterium frigoris PS1]
Length = 316
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 36/237 (15%)
Query: 162 KNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEP---PHVEGDVVKPDAGHVQVEKY 217
+N+ + D A SGV++F+F+ S+ IY K A +P ++ D ++P + K
Sbjct: 83 ENMQIQNNLIDTALKSGVEKFIFLGSSCIYPKLAPQPLKEEYLLTDTLEPTNEWYAIAKI 142
Query: 218 --------ISENFS-NWASFRPQYMIGSGNNKD-CEEWFFDRIVRK---------RPVPI 258
I + F+ ++ S P + G+ +N D ++RK PV +
Sbjct: 143 TGVKACQAIRKQFNKDYVSLMPTNLYGTHDNFDLTSSHVLPAMMRKFHEAKENGNTPVTL 202
Query: 259 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
GSG V D++ + A+EN ++N+ + +T+ +A+ + G
Sbjct: 203 WGSGTPMREFLFVDDMAQAVVFALEN--KLPDYLYNVGTGEDLTIKQLAETIQKITGHQG 260
Query: 319 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
EI+ K G +K MH LGW+ L E +++ ++ +++
Sbjct: 261 EIIWDSSKPDGT-PRKLMDISKMH----------ALGWKHQVQLEEGIQKTYDWFLE 306
>gi|260576531|ref|ZP_05844520.1| NAD-dependent epimerase/dehydratase [Rhodobacter sp. SW2]
gi|259021254|gb|EEW24561.1| NAD-dependent epimerase/dehydratase [Rhodobacter sp. SW2]
Length = 306
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 113/310 (36%), Gaps = 67/310 (21%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP--- 141
GG IG +L ELL +GH V + D + ++ + SAG V GD
Sbjct: 7 GGSGFIGSHLVDELLAAGHRVRVF---DRSPERFRAA---------SAGVDLVQGDLGDT 54
Query: 142 -------AEVGNVVGGVT--------FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
++VG V V+ D D G ++ VR + + +++ V++ +++S
Sbjct: 55 ALLAEALSDVGQVFHLVSTTVPATSNLDPAADIRGNLINTVR-LLELMRAAKVRRMVYLS 113
Query: 187 SAG-IYKPADEPPHVEGDVVKPDAGH----VQVEKYISENFSNWASFRPQYM-------- 233
S G +Y P E ++P + + V VE Y+ + P +
Sbjct: 114 SGGTVYGIPQTDPVAETHRLQPISSYGIVKVAVENYLMME-AYLHGLEPVILRASNPYGP 172
Query: 234 -IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
G G + F +I + P+ I G G + HVRDL+ + LA E + N
Sbjct: 173 RQGHGGVQGVIGTFLWKIAQGDPIQIWGDGSVVRDFIHVRDLAQLCVLAAETGIVGTFN- 231
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM-HFYAEPRAAK 351
+G I A + +K P R + PR
Sbjct: 232 -------------------AGSGAGHSIAEVVDTIAAVTGRKIVPLRKEGRGFDVPRVVL 272
Query: 352 DILGWRSTTN 361
DI R+TT
Sbjct: 273 DISAIRATTG 282
>gi|148269553|ref|YP_001244013.1| NAD-dependent epimerase/dehydratase [Thermotoga petrophila RKU-1]
gi|147735097|gb|ABQ46437.1| NAD-dependent epimerase/dehydratase [Thermotoga petrophila RKU-1]
Length = 309
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 27/212 (12%)
Query: 178 GVKQFLFISSAG-IY--------KPADEPPH-VEGDVVKPDAGHVQVEKYISENFSNWAS 227
GVK+F+F S+ G IY P E PH + + + + +E + E +
Sbjct: 108 GVKKFIFSSTGGAIYGENVKVFPTPETETPHPISPYGIAKYSIEMYLEFFAREYGLKYTV 167
Query: 228 FRPQYMIGSGNNKDCEE----WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
R + G + E F +R++R V I G G + +V D+ LA+E
Sbjct: 168 LRYANVYGPRQDPYGEAGVVAIFTERMLRGEEVHIFGDGEYVRDYVYVDDVVRANLLAME 227
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 343
+ +FN+ + R T++ + KL + G E V+ P+ D +K+
Sbjct: 228 K---GDNEVFNIGTGRGTTVNQLFKLLKEITGYDKEPVYKPPRKG--DVRKSI------- 275
Query: 344 YAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
+ AK+ LGW L E LK E + K
Sbjct: 276 -LDYTKAKEKLGWEPKIPLEEGLKLTVEYFRK 306
>gi|228953370|ref|ZP_04115416.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|423425172|ref|ZP_17402203.1| hypothetical protein IE5_02861 [Bacillus cereus BAG3X2-2]
gi|423506235|ref|ZP_17482825.1| hypothetical protein IG1_03799 [Bacillus cereus HD73]
gi|449089584|ref|YP_007422025.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|228806267|gb|EEM52840.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|401112387|gb|EJQ20265.1| hypothetical protein IE5_02861 [Bacillus cereus BAG3X2-2]
gi|402449166|gb|EJV81004.1| hypothetical protein IG1_03799 [Bacillus cereus HD73]
gi|449023341|gb|AGE78504.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 341
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 108/273 (39%), Gaps = 47/273 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G E L GHE+T+ G K F+ ++
Sbjct: 2 KILIL----GGTRFLGRAFVDEALQRGHEITLFNRG------TNKEIFSNVEQLT----- 46
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + T+DVV+D G + +R V + K + ++ ++FISS +YK D
Sbjct: 47 ---GDRNNDVSSLKNRTWDVVIDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSVYK--D 100
Query: 196 EPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF----------------------RPQ 231
PH E +++P+ Q++ + S + + R
Sbjct: 101 WIPHDIKEDYILQPEPTEEQIKAVENGEISPYEHYGALKVLCEKEAEKYWPGRVLHVRAG 160
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G + D ++ R+ + V +PG + I ++D++ EN +A + N
Sbjct: 161 LLSGMFDYTDRLPYWIQRVAKGGNVLVPGRKNRPVQIVDIKDVARFGLNMAENNKAGTFN 220
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
I + +T++ + C + E V D
Sbjct: 221 ITG--PNDELTMEELLNTCKKVTNSDAEFVWVD 251
>gi|444429672|ref|ZP_21224854.1| putative nucleotide-sugar epimerase [Gordonia soli NBRC 108243]
gi|443889333|dbj|GAC66575.1| putative nucleotide-sugar epimerase [Gordonia soli NBRC 108243]
Length = 352
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
G Q + HV D++ A+E+ S FN+ S R + + +A + A+AAG P IV
Sbjct: 241 GRQMRDFVHVDDVARANLAAIEDRSLESFRAFNICSGRPIAIGEVATILAEAAGGPPPIV 300
Query: 322 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 370
+ + + + H A+P AA+ LG+R++T +PE RF
Sbjct: 301 TGEHRVSDV----------RHVVADPAAAEAELGFRAST-MPEVGIARF 338
>gi|398925595|ref|ZP_10661969.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM48]
gi|398171956|gb|EJM59844.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM48]
Length = 309
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 107/276 (38%), Gaps = 39/276 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF-NRFNEIVSAGGK------- 135
+GG IG +L LL GH V I+ D ++ K P N E++
Sbjct: 9 TGGAGFIGSHLTDALLAKGHAVRILD--DLSTGKRSNLPLDNPKVELIVGDVADAAVVAQ 66
Query: 136 -----TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ A V +V V D + + N V + + +GVK+ LF SSA +
Sbjct: 67 AMAGCSAVAHLAAVASVQASV--DDPVRTHQSNFIGTLNVCEAMRQAGVKRVLFASSAAV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIG---------SGNNKD 241
Y E ++ D K +K E++ ++ +R Q+ + G +D
Sbjct: 125 YGNNGEGESIDEDTPKAPLTPYAADKLAGEHYFDF--YRRQHGLEPVIFRFFNIYGPRQD 182
Query: 242 -------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
F +R + P+ + G G Q + +V DL +L A+E P + N
Sbjct: 183 PSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFVYVEDLVDLLVQAIEKPRVEDGAV-N 241
Query: 295 LVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+ ++A TL M + G LP V Y P +G
Sbjct: 242 VGWNQATTLKQMLEALEAVVGQLPS--VSYGPARSG 275
>gi|419963330|ref|ZP_14479306.1| UDP-galactose 4-epimerase [Rhodococcus opacus M213]
gi|414571263|gb|EKT81980.1| UDP-galactose 4-epimerase [Rhodococcus opacus M213]
Length = 330
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 104/272 (38%), Gaps = 51/272 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G A+ LL GH T++ V D ++ P AG + V D A
Sbjct: 6 TGGAGYVGSVCAQRLLECGH--TVVIVDDLSTGNADAVP---------AGAEFVEEDVAS 54
Query: 144 VG-NVVGGVTFDVVLDNNGKNL---DAVRPVADW-------------AKSSGVKQFLFIS 186
V+GG FD VL ++L V P W +SSG + +F S
Sbjct: 55 AAERVLGGAEFDGVLHFAARSLVGESVVTPETYWNANVVKTLTLLEAMRSSGTGRLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIGS-- 236
+A Y + P E +P + + I +++A S R + G+
Sbjct: 115 TAATYGSPESVPITEDAPTRPTNPYGATKLAIDHAITSYAVAHGLAACSLRYFNVAGAYA 174
Query: 237 --GNNKDCEEWFFDRIV-----RKRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVE 283
G N+ E ++ R+ + + G+ G + H+RDL+ LA+E
Sbjct: 175 GLGENRLVETHLIPLVLQVAAGRRDEISVFGTDWPTPDGTAVRDYIHIRDLAEAHILALE 234
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG 315
+ + ++NL + ++ + C + G
Sbjct: 235 STRPGTHRVYNLGTGTGFSVREVISSCERVTG 266
>gi|456985078|gb|EMG20990.1| NADH(P)-binding protein, PF13460 family [Leptospira interrogans
serovar Copenhageni str. LT2050]
Length = 168
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 19/137 (13%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-----------FNRFNEIVSA 132
+GG +G L LL G++VT++ + D +K+ P N N+ +
Sbjct: 11 TGGAGYVGAMLVPRLLSEGYKVTVLDLMIYGEDVLKEHPNLTKIQGDIRDQNVLNQTIPG 70
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGK--NLDAVRPVADWAKSSGVKQFLFISSAGI 190
+ + + +F++ N GK NLDA RP+ + +K VK+F++ SS+ +
Sbjct: 71 HDSVI-----HLACISNDPSFELN-PNLGKSINLDAFRPLVEISKKHSVKRFIYASSSSV 124
Query: 191 YKPADEPPHVEGDVVKP 207
Y DEP E ++P
Sbjct: 125 YGIKDEPNVTEDFSLEP 141
>gi|418474583|ref|ZP_13044068.1| reductase, partial [Streptomyces coelicoflavus ZG0656]
gi|371544795|gb|EHN73470.1| reductase, partial [Streptomyces coelicoflavus ZG0656]
Length = 284
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 78/204 (38%), Gaps = 22/204 (10%)
Query: 153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK------PADEPPHVEGDVVK 206
+D V+D AVR A + +++++SS +Y A++ P VEG
Sbjct: 1 WDAVVDTWSAAPRAVRNAARLLRDR-AGRYVYVSSRSVYAWPPPAGCAEDAPLVEG--AS 57
Query: 207 PDAGHVQV-------EKYISENFSNWASF--RPQYMIGSGNNKDCEEWFFDRIVRKRPVP 257
DAG E +S+ F S R ++G N W+ DR+ R PV
Sbjct: 58 ADAGQSDYARDKRGGELAVSDAFGADRSVLVRAGLILGPYENIGRLPWWLDRVARGGPVL 117
Query: 258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 317
PG VRDL+ AVE N+ L T+ G+ CA G
Sbjct: 118 APGPRELPVQYIDVRDLADWTLGAVERELGGPYNL-GLPRRGHTTMGGLLDACATVTGGT 176
Query: 318 VEIVHYDPK---AAGIDAKKAFPF 338
E+ DP AAGI+ P
Sbjct: 177 AELRWTDPGTVLAAGIEPWVQLPV 200
>gi|338214070|ref|YP_004658127.1| UDP-glucuronate 4-epimerase [Runella slithyformis DSM 19594]
gi|336307893|gb|AEI50995.1| UDP-glucuronate 4-epimerase [Runella slithyformis DSM 19594]
Length = 317
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 112/291 (38%), Gaps = 63/291 (21%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFN-EIVSAGGKTVWGDPA 142
+GG IG +LA+ LL G+ V + D D + P R N E++S + +
Sbjct: 6 TGGAGFIGSHLAERLLRQGNTVVCV---DNLDDYLYSPALKRANIELLSEYPAFTFIE-- 60
Query: 143 EVGNVVGGVTFDVVLDNNGK-------------------------NLDAVRPVADWAKSS 177
G++ +L + G N++ V + + +
Sbjct: 61 --GDIRNQEALRQLLLDRGCEAVFHLAAYAGVRASVQEPEKFMEVNINGTLSVLEAMREA 118
Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDV----VKPDAGHVQVEKYISENFSNWASF----- 228
G++ +F SS+ +Y A P E D + P A + + ++ ++ + F
Sbjct: 119 GLRTLIFASSSSVYGNAAHVPFKETDAADQPISPYAASKRAAELLAYSYYSLYGFQITCL 178
Query: 229 ----------RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 278
RP+ I F RI+ + P+ + G+G+ F N +V D L
Sbjct: 179 RLFTVYGPRQRPEMAIRK---------FIHRILEEEPIELYGNGLTFRNYTYVADAVQGL 229
Query: 279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
A+E+ ++N+ +++ L + ++ Q +I+ Y P+ AG
Sbjct: 230 MKALEHS-GEGFRVYNIGGAKSICLKEVIEVIEQITNKKSKII-YRPEQAG 278
>gi|229116562|ref|ZP_04245949.1| NAD-dependent epimerase/dehydratase [Bacillus cereus Rock1-3]
gi|423379145|ref|ZP_17356429.1| hypothetical protein IC9_02498 [Bacillus cereus BAG1O-2]
gi|423447588|ref|ZP_17424467.1| hypothetical protein IEC_02196 [Bacillus cereus BAG5O-1]
gi|423546354|ref|ZP_17522712.1| hypothetical protein IGO_02789 [Bacillus cereus HuB5-5]
gi|423623851|ref|ZP_17599629.1| hypothetical protein IK3_02449 [Bacillus cereus VD148]
gi|228666872|gb|EEL22327.1| NAD-dependent epimerase/dehydratase [Bacillus cereus Rock1-3]
gi|401129999|gb|EJQ37668.1| hypothetical protein IEC_02196 [Bacillus cereus BAG5O-1]
gi|401180923|gb|EJQ88077.1| hypothetical protein IGO_02789 [Bacillus cereus HuB5-5]
gi|401257774|gb|EJR63971.1| hypothetical protein IK3_02449 [Bacillus cereus VD148]
gi|401633591|gb|EJS51368.1| hypothetical protein IC9_02498 [Bacillus cereus BAG1O-2]
Length = 341
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 109/274 (39%), Gaps = 49/274 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G K F +++
Sbjct: 2 KILIL----GGTRFLGRAFVEEALKRGHEVTLFNRG------TNKEIFPEVEQLI----- 46
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK--- 192
GD + + +DVV+D G + +R V + K + VK ++FISS +YK
Sbjct: 47 ---GDRNNDVSSLENRKWDVVIDTCGFSPHHIRNVGEVLKDN-VKHYIFISSLSVYKDWI 102
Query: 193 --------------PADEPPHVEGDVVKP----DAGHVQVEKYISENFSNW----ASFRP 230
+D VE + P A V EK +EN+ W R
Sbjct: 103 LHHIKEDYILQPEPTSDRIKAVENGEISPYEHYGALKVLCEKE-AENY--WPGRVLHVRA 159
Query: 231 QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
+ G + D ++ R+ + V +PG + + ++D++S VEN +A +
Sbjct: 160 GLLSGMFDYTDRLPYWVQRVAKGGKVLVPGRKDRPVQLVDIKDVASFGLNMVENNKAGTF 219
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
NI + +T++ + C + E V D
Sbjct: 220 NITG--PNDELTMEELLNTCKKVTNSDAEFVWVD 251
>gi|161527676|ref|YP_001581502.1| NAD-dependent epimerase/dehydratase [Nitrosopumilus maritimus SCM1]
gi|160338977|gb|ABX12064.1| NAD-dependent epimerase/dehydratase [Nitrosopumilus maritimus SCM1]
Length = 308
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 11/161 (6%)
Query: 177 SGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSNWA------ 226
+ VK F+ SSA +Y + P E + P A + +E Y+ + +
Sbjct: 108 NNVKNFIAASSAAVYGNPKQIPVTEFTIPNPVSPYGADKIALEFYLRAFCNAYGINGIAL 167
Query: 227 SFRPQYMIGSGN-NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
F Y +G N F ++I + +P+ I G G + H+ DL + ++ N
Sbjct: 168 RFFNVYGLGQSNAYAGVITKFLNQIHQTKPLRIFGDGKNTRDFIHIDDLVMGIEQSISNI 227
Query: 286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 326
+++NL S ++V++ +AKL + + +EI + P+
Sbjct: 228 SGKRGSVYNLASGKSVSVKELAKLMLEISDKKLEIKYESPR 268
>gi|296165134|ref|ZP_06847685.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295899546|gb|EFG79001.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 880
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 24/164 (14%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP---DAGH-VQVEKYI 218
N+D R V +G + +F SSA +Y D P E D P D H QVE+ +
Sbjct: 85 NIDGTRNVLAAMARTGASRIVFASSAHVYGSGDA-PKTEHDARTPVGADGQHKAQVERML 143
Query: 219 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP----GSGMQFTNIAHVRDL 274
++ W + R +IG + + W +R + +P GS + + H D
Sbjct: 144 EDSDLEWVAIRSALIIG----RSVDNWV------RRLLALPAFPDGSADRLMQVVHPDDA 193
Query: 275 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
+ A+ +PE S + NL + +T + A A G PV
Sbjct: 194 LRLFNRAIVDPEIGSGPV-NLAAPGELTF----RRIAAALGRPV 232
>gi|441216133|ref|ZP_20976849.1| UDP-glucose 4-epimerase, GalE5 [Mycobacterium smegmatis MKD8]
gi|440624566|gb|ELQ86427.1| UDP-glucose 4-epimerase, GalE5 [Mycobacterium smegmatis MKD8]
Length = 323
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 129/314 (41%), Gaps = 53/314 (16%)
Query: 84 SGGHAVIGFYLAKELL-GSGHEVTIMTVGDENSDKMKKPPFNR-FNEIVSAGGKTVWGDP 141
+GG IG + + L+ G+ HEV + +D+ PP+ R ++++ ++
Sbjct: 7 TGGVGTIGSAVVRRLMRGNTHEVRV-------ADQRAAPPWMREACDVMTGDLRSAREAE 59
Query: 142 AEVGN---------VVGGVTF-----DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS 187
A V +VGG+ +L+ N ++V A GV + +++SS
Sbjct: 60 AAVDGCSHVIHLAAIVGGIANFHKLPHTLLEMNTGLYNSVFGAA---LREGVDRLVYVSS 116
Query: 188 AGIYKPADEPPHVEGDV--VKPDAGHVQVEKYISENFSN---------WASFRPQYMIGS 236
+ +++ A + P E + +P K E + + RP G
Sbjct: 117 SMVFEHATQFPTPEEHLPDCRPPRSAYGFSKLTGEMYCRALHEEHGLPFTICRPFNAYGP 176
Query: 237 GNNKDCEEWFFDRI---VRK-----RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
G D E + +RK RP+ I GSG Q + +V D++ + A+ +P AA
Sbjct: 177 GELPDTEPGIAHAVPDLIRKALSGQRPLQIFGSGRQTRTLTYVDDIADGIVTAMFHP-AA 235
Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPR 348
+ FN+ + T+ +A+L A GL DP ++ F +
Sbjct: 236 ENQDFNISASEERTVAEIAQLIWAACGL-------DPDDFELERVPTFDVDVQRRWPSVV 288
Query: 349 AAKDILGWRSTTNL 362
AK++LGW+++ +L
Sbjct: 289 KAKELLGWQASVDL 302
>gi|110669372|ref|YP_659183.1| nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase)
[Haloquadratum walsbyi DSM 16790]
Length = 345
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 133/344 (38%), Gaps = 63/344 (18%)
Query: 67 VKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI---MTVGD------ENSDK 117
+K A+ K+ +V +GG IG +L + LL G EV I + G E+ +
Sbjct: 7 IKCMASSSKQRALV---TGGAGFIGSFLVESLLERGSEVVIADNFSKGHGKLTHLEDDIE 63
Query: 118 MKKPPFNRFNEIVSAGGKT--VWGDPAEVGNV-------VGGVTFDVVLDNNGKNLDAVR 168
+K + A V+ A VG + V G+T V++ N L+A R
Sbjct: 64 IKTVDLTTHKGCIEATEDIDDVYHLAASVGGIHYIQRENVHGLTPSVLM--NQHMLEAAR 121
Query: 169 PVADWAKSSGVKQFLFISSAGIYKPA-DEPPHVEGDVVKPD-----------AGHVQVEK 216
+ D V +FLF SSA +Y+ DE D P G V +
Sbjct: 122 -IQD------VDRFLFASSACVYRQQHDELNRFSEDQAIPANPHSTYGWAKVLGEVACDA 174
Query: 217 YISENFSNWASFRPQYMIGSGNNKDCEE-WFFDRIVRK-------RPVPIPGSGMQFTNI 268
Y ++ + + R G N D + + RK + + G G Q
Sbjct: 175 YHTDTTVDTGAVRIFNAYGPRENLDPDSSHVIPALCRKVIEADDGDSIELFGDGTQERGF 234
Query: 269 AHVRDLSSMLTLAVEN-PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 327
++ DL + A+E+ + N+ N D VT++ +A+ +G +E+ H K
Sbjct: 235 IYITDLVEGMIQAMEHKTDGEPINLGN--GDEVVTINELAQKIIALSGKDIEVEHDLSKP 292
Query: 328 AGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 371
G D + + KD LGW TT L E L+E +E
Sbjct: 293 TGTDK----------YACDTTKMKDELGWEPTTPLEEGLQEVYE 326
>gi|419780605|ref|ZP_14306448.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK100]
gi|383184981|gb|EIC77484.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK100]
Length = 326
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 139/351 (39%), Gaps = 77/351 (21%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGD--ENS-------DKMKKP 121
KKVL+ +G +G Y+ +EL G++V VG ENS D K+
Sbjct: 2 KKVLV----TGATGFLGKYVVEELSQQGYQVRAFGRNRKVGQSLENSSVAFFQGDLTKQE 57
Query: 122 PFNR----FNEIVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
R + +V AG TVWG P E D N+ + V + +
Sbjct: 58 DLARACQGMDMVVHAGALSTVWG-PWE--------------DFYQTNVLGTKYVLNACRE 102
Query: 177 SGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF------- 228
+G+++ +++SS IY P D+ E + + + YI ++ F
Sbjct: 103 AGIQRLVYVSSPSIYAAPRDQLAIKESAAPQEN----NLNNYIRSKLASEKLFKDYPDVP 158
Query: 229 ----RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
RP+ + G G+ ++ +K +P+ G G Q ++ V +++ + LA+E
Sbjct: 159 SIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALEA 216
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAFPFRNMHF 343
P+ AS ++N+ + + + + G P+ P + I + F ++ +
Sbjct: 217 PQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPITYRKVPAPLLSVIASSLEFLYKVLKL 275
Query: 344 YAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 375
EP +A +D LG+ ++ E +++ ++Y K
Sbjct: 276 KGEPPLTRYTYYLLRYSQTLDISKAERD-LGYHPQISISEGIEQYVQDYRK 325
>gi|118576196|ref|YP_875939.1| nucleoside-diphosphate-sugar epimerase [Cenarchaeum symbiosum A]
gi|118194717|gb|ABK77635.1| nucleoside-diphosphate-sugar epimerase [Cenarchaeum symbiosum A]
Length = 299
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 122/301 (40%), Gaps = 32/301 (10%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG ++A+ LL GH VT++ D D + +R + +A +
Sbjct: 6 TGGAGFIGGHIARHLLDRGHSVTVIDSNDA-VDLEGRVELHRADIRDAAALRRALDGTDG 64
Query: 144 VGNVVGGVTFDVVLDN----NGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH 199
V + V+ N + N++ V + G+K ++ SS+ IY A P
Sbjct: 65 VFHQAALVSVQESFSNQELYHQVNVNGTENVLAASLDLGIKT-VWASSSSIYGDATSLPI 123
Query: 200 VEGDVVKP--------DAGHVQVEKYISENFSNWASFRPQYMIGSGNNK---DCEEWFFD 248
E V P G V +KY S + S R + G G + F++
Sbjct: 124 GEDSVRDPVTPYGETKAQGEVLADKYASMG-ARIVSLRYFNVYGRGQSAAYAGVITGFYN 182
Query: 249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
RI +P I G G + HV D++ +A+E+P A S N+ + ++ +A+
Sbjct: 183 RIESGKPPVIFGDGSHTRDYVHVEDVARANLMAMESP--ADSCSINIGTGIETSVLELAR 240
Query: 309 LCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF-YAEPRAAKDILGWRSTTNLPEDLK 367
+ + +G +E DP P + F A+ A+ ++GW + L E L+
Sbjct: 241 MMIKLSGADLEPEFADP-----------PGDEVAFSRADTALARQLIGWSHSIELEEGLR 289
Query: 368 E 368
+
Sbjct: 290 K 290
>gi|170720577|ref|YP_001748265.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida W619]
gi|169758580|gb|ACA71896.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida W619]
Length = 314
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 113/294 (38%), Gaps = 34/294 (11%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG +L ELL G+ V ++ + ++ K P + N + G D A
Sbjct: 14 TGGAGFIGSHLTDELLAKGYAVRVLD--NLSTGKRSNLPLSHPNLQLIEGD---VADAAL 68
Query: 144 VGNVVGGV--------------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
V + V G + D + + N V + + GVK+ +F SSA
Sbjct: 69 VAHAVKGCAGVVHLAAVASVQASVDDPVRTHQSNFIGTLNVCEAMRLCGVKRVVFASSAA 128
Query: 190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW---------ASFRPQYMIG----- 235
+Y E ++ D K +K SE + ++ FR + G
Sbjct: 129 VYGNNGEGASIDEDTPKAPLTPYASDKLASEYYMDFYRREHGLLPVVFRFFNIYGPRQDP 188
Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
S F +R + P+ + G G Q + V DL +L +E+ A I N+
Sbjct: 189 SSPYSGVISIFAERAQKGLPITVFGDGEQTRDFFFVSDLVKLLVQGLESGPVAEGAI-NV 247
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRA 349
++A +L+ + AQ G E+ + +A I +A R + + PRA
Sbjct: 248 GLNQATSLNQILAALAQVLGKLPEVSYQPARAGDIRHSRANNQRLLSGFEMPRA 301
>gi|147677436|ref|YP_001211651.1| nucleoside-diphosphate-sugar epimerases [Pelotomaculum
thermopropionicum SI]
gi|146273533|dbj|BAF59282.1| nucleoside-diphosphate-sugar epimerases [Pelotomaculum
thermopropionicum SI]
Length = 312
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 123/311 (39%), Gaps = 38/311 (12%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--A 132
+++L+ +GG +G +L ++LL G V M + +P N+ + S A
Sbjct: 6 RRILV----TGGAGFLGSHLCEKLLAEGAGVRAMDTFASGRLENLRPVLNKIELVNSNIA 61
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNN-------GKNLDAVRPVADWAKSSGVKQFLFI 185
+ V +V ++V + F + L G+ L + + A S +++
Sbjct: 62 CAERVLEAAGDVDSIVH-LAFPMALRCRPVETGVVGEILTGLLNLIKAALSRNA-LLVYV 119
Query: 186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS---------FRPQYMIGS 236
SS +Y P E ++P H V K ENF + R + G
Sbjct: 120 SSIAVYGNDKYIPMDENHPLEPVLIHGAV-KLAGENFCRTMAASNGLRMVILRVADIYGP 178
Query: 237 GNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
N++ F + ++ P+ + G G V D + L++ PEA +FN+
Sbjct: 179 RNSRVSVPIKFLLQAMKGEPITVYGDGSDRRTYTFVSDFCEAVVLSLLRPEAVGG-VFNI 237
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILG 355
D V++ +A +AAG ++ D AAG R + + R AK +LG
Sbjct: 238 GGDECVSMRELALKVKKAAGSKSPVIFQDAPAAG---------RTLCI--DSRKAKKLLG 286
Query: 356 WRSTTNLPEDL 366
+R +L E L
Sbjct: 287 FRPAFDLAEGL 297
>gi|148927806|ref|ZP_01811231.1| NAD-dependent epimerase/dehydratase [candidate division TM7
genomosp. GTL1]
gi|147886832|gb|EDK72377.1| NAD-dependent epimerase/dehydratase [candidate division TM7
genomosp. GTL1]
Length = 345
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 91/220 (41%), Gaps = 25/220 (11%)
Query: 85 GGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
GG ++G L LL G++ + ++ EN D ++K + E WG E
Sbjct: 43 GGAGLVGQNLVARLLQRGYKNIVVLDKHKENLDILRKVQPDITVEYADLAVPGDWGHHFE 102
Query: 144 -VGNVV------GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE 196
G VV GG+ + DNN N+ + R + D + + V + ISS+ + AD+
Sbjct: 103 GAGTVVMLQAQIGGINYSE-FDNN--NVVSTRIILDLIRKNNVPHLVHISSSVVESVADD 159
Query: 197 PPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV 256
+ EK + ++ RP M G + K + R ++K PV
Sbjct: 160 ---------FYTRSKKEQEKIVIDSGITCPILRPTLMFGWFDRKHLG--WLSRFMKKAPV 208
Query: 257 -PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
PIPG G +V D +++ +EN S I+N+
Sbjct: 209 FPIPGDGKYMRQPLYVGDFCNVIISCIEN--RVSKGIYNI 246
>gi|149173451|ref|ZP_01852081.1| hypothetical protein PM8797T_21943 [Planctomyces maris DSM 8797]
gi|148847633|gb|EDL61966.1| hypothetical protein PM8797T_21943 [Planctomyces maris DSM 8797]
Length = 324
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 121/321 (37%), Gaps = 49/321 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP-- 141
+GG IG +LA L+ GH V + D + + E + + V GD
Sbjct: 7 TGGAGFIGSHLATRLIKDGHRVRVF-------DNLSTGALHNL-EHIKDDVEFVQGDLRD 58
Query: 142 -AEVGNVVGGV--------------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
A V GV + + LD + + V D A+ SGV++ ++
Sbjct: 59 LAAVEQATAGVEIVFHQAALASVPRSVEHPLDTHEACVTGTVHVLDAARRSGVQRVVYAG 118
Query: 187 SAGIYKPADEPPHVEG---DVVKPDAGHVQVEKYISENFSN---WASFRPQYMIGSGNNK 240
S+ Y ++ P EG +V+ P A + + F+N + R +Y G +
Sbjct: 119 SSSAYGNQEQMPKHEGQTPEVLSPYAAAKLAGELYCQAFANSYDLETVRIRYFNVFGPRQ 178
Query: 241 DCEE-------WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNI 292
D F ++ R I G G+Q + V ++ LA + P + S N+
Sbjct: 179 DPNSPYSAVIPLFTSALLEGRRPMIFGDGLQSRDFTFVDNVVQANILASQAPADKVSGNV 238
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 352
+N ++ L + K P YDP D + A H +A+ AA+
Sbjct: 239 YNAACGSSLNLIDLLKFICNQLDKP-----YDP-----DFQPARTGDVKHSWADISAAQR 288
Query: 353 ILGWRSTTNLPEDLKERFEEY 373
LG+ + E L++ + Y
Sbjct: 289 DLGYEPVVEIEEGLRKTIDWY 309
>gi|419954701|ref|ZP_14470837.1| epimerase [Pseudomonas stutzeri TS44]
gi|387968565|gb|EIK52854.1| epimerase [Pseudomonas stutzeri TS44]
Length = 309
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 19/207 (9%)
Query: 157 LDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK 216
L + NL V + + GV++ LF SSA +Y E ++ D K +K
Sbjct: 90 LGTHQSNLIGTLNVCEAMCAEGVRRVLFASSAAVYGNNGEGEAIDEDTPKAPLTPYAADK 149
Query: 217 YISENFSNWASFRPQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPG 260
SE++ ++ +R Q+ + G +D F +R + P+ + G
Sbjct: 150 LASEHYLDF--YRRQHGLEPVIFRFFNIFGPRQDPSSPYSGVISIFTERAQKGLPIAVFG 207
Query: 261 SGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI 320
G Q + +V DL +L A+E+P AA + N+ RA +L+ + + G +
Sbjct: 208 DGEQTRDFVYVGDLVEVLVQALESPVAAEGAV-NVGLSRATSLNQLLTAIGEVLGGLPAV 266
Query: 321 VHYDPKAAGIDAKKAFPFRNMHFYAEP 347
+ P+ I +A R + Y P
Sbjct: 267 SYQAPRPGDIRHSRANNTRLLQRYRLP 293
>gi|366089091|ref|ZP_09455564.1| hypothetical protein LaciK1_03173 [Lactobacillus acidipiscis KCTC
13900]
Length = 321
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 100/260 (38%), Gaps = 40/260 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG----- 139
G + IG YL +L+ + +EV ++ G K P+ + +G K +
Sbjct: 7 GAYGHIGSYLVPKLVKNNNEVIAVSRG-------KHQPYTQ-----DSGWKKIQHMSLDR 54
Query: 140 --DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP 197
DP + + + DVV+D L+ + + K++ + +LF SS + A
Sbjct: 55 VKDP-KFATKIAALNADVVVDLINFKLEDTQKMTAALKNTQLSHYLFCSSIWAHGRAKTL 113
Query: 198 PHVEGDVVKPDAGHVQVEKYISENFSNWASFR----------PQYMIGSG-------NNK 240
P D K K+ SE F +R P + G G N
Sbjct: 114 PADPNDPAKEPLDDYGKNKFASEQFLK-HEYRTNGFPVTIIMPGQISGPGWTIINPVGNT 172
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
D F +I + +P GM+ + H D++ M A+ + A F+ V+ +
Sbjct: 173 DLG--VFQKIANGEKITLPNFGMETLHHVHADDVAQMFYKAILHRNQALGESFHAVAAES 230
Query: 301 VTLDGMAKLCAQAAGLPVEI 320
+TL G AK C Q G +I
Sbjct: 231 MTLYGYAKACYQFFGQEPQI 250
>gi|344211208|ref|YP_004795528.1| NAD-dependent epimerase/dehydratase [Haloarcula hispanica ATCC
33960]
gi|343782563|gb|AEM56540.1| NAD-dependent epimerase/dehydratase [Haloarcula hispanica ATCC
33960]
Length = 327
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 121/307 (39%), Gaps = 46/307 (14%)
Query: 77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT 136
VL++ GG IG + E +G++VT++T G + PF +++ G
Sbjct: 4 VLVI----GGGRFIGRHTVTEFRDAGYDVTMLTRG------QRSNPFAN-SDVTHIKGDR 52
Query: 137 VWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE 196
D E + DVV+D + VR D + + ++++SS Y +
Sbjct: 53 NERDTLETAR--KQIDPDVVVDCVAYFPEDVRAATDVFADA--EAYVYVSSGAAYG-VER 107
Query: 197 PPHVEGDVVKPDAGHV-------QVEKY-------------ISENFSNWASFRPQYMIGS 236
P EG+ P AG E Y +E+ S RP + G
Sbjct: 108 TPKREGET--PLAGCTAEQATTDSAETYGPRKAEGDREVFAAAEDGVRAMSVRPTVVYGP 165
Query: 237 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
+ + ++ DR+ + +P G+ +A+V D++S L L E A + +N+
Sbjct: 166 YDYTERFAYWVDRVAEYDRIVVPSDGLSLWQMAYVEDVASALRLVAERGTAGEA--YNVG 223
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFP-FRNMHFYAEPRAAKD 352
+ A TL L A VE + + AAG+D FP +R+ +D
Sbjct: 224 DEHAPTLREWVDLLAGVHDTSVETIGVGERELAAAGLDPDD-FPIYRDSPHLLSTAKLRD 282
Query: 353 ILGWRST 359
LGW ST
Sbjct: 283 -LGWSST 288
>gi|332708433|ref|ZP_08428410.1| nucleoside-diphosphate-sugar epimerase [Moorea producens 3L]
gi|332352836|gb|EGJ32399.1| nucleoside-diphosphate-sugar epimerase [Moorea producens 3L]
Length = 327
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 14/158 (8%)
Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD---------AGHVQVEKYISENFSN 224
A +GV+ F+FISS G + E +PD A +E S N
Sbjct: 104 AIKAGVQHFIFISSIGAMATLSDQILTENSPCQPDTPYGCSKLKAEQALIELASSSNKMT 163
Query: 225 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
W RP + G GN + E + +K P+P GS ++ V +L + + +
Sbjct: 164 WTILRPTLVYGQGNPGNMER-LIKLVQKKLPLPF-GSLNNRRSLVFVGNLVDAIATIITH 221
Query: 285 PEAASSNIFNLVSD-RAVTLDGMAKLCAQAAGLPVEIV 321
P+A + L+SD ++ + + AQ LP I+
Sbjct: 222 PQAKNQTF--LISDGEDLSTTQLIRQIAQCLELPCHIL 257
>gi|223938792|ref|ZP_03630680.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514]
gi|223892490|gb|EEF58963.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514]
Length = 321
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 105/267 (39%), Gaps = 43/267 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG--KTVWGDP 141
+GG IG ++ + LL SGH ++ + D N + E+ + G K V G+
Sbjct: 6 TGGAGFIGSHVCERLLQSGH--SVWALDDLNPFYSPAVKESNLREVAALGKPFKFVLGEL 63
Query: 142 AE---VGNVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQF 182
++ VGNV V FD V+ + N++ + + A+ GVK+
Sbjct: 64 SDARIVGNVFKEVQFDQVIHLAARAGVRPSLDEPEFFQQVNVEGTVNILEAARRHGVKKV 123
Query: 183 LFISSAGIYKPADEPPHVEGD----VVKPDA---------GHVQVEKYISENFSNWASFR 229
L SS+ +Y + P E D V+ P A GHV Y + + R
Sbjct: 124 LIASSSSVYGVNRKIPFAESDPVFSVISPYAASKLACEALGHVYHHVY----GMDVSMLR 179
Query: 230 PQYMIGSGNNKDCEEWFFDRIVRK-RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
+ G D F +++ +P+P+ G G + ++ D+ + E
Sbjct: 180 FFTVYGPRQRPDLAIHKFAKLITTGKPIPVYGDGSTARDYTYISDIVDGVVACTE--RKF 237
Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAG 315
+ IFNL V L + ++ Q+ G
Sbjct: 238 TYEIFNLGGSETVNLSRLIEVLEQSLG 264
>gi|406877374|gb|EKD26619.1| methyltransferase FkbM [uncultured bacterium]
Length = 292
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 17/153 (11%)
Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE--KYISENFSNWASFRPQ 231
A+ +G+K+ LF+S+ + +K ++ V++E + I ++ NW RP
Sbjct: 87 AEEAGIKRALFVSTTAV-----------KTTLKANSKKVRLEAEETIKKSSLNWTIIRPT 135
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
+ G ++++ F + VRK P + IPGSG HV DL+ + A + E S
Sbjct: 136 MIYGGLDDRNIIR--FIKFVRKMPFLIIPGSGEFLQQPVHVEDLAKGIVDAFFS-ENTSY 192
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY 323
+NL V+ + M ++ + + ++ H+
Sbjct: 193 KTYNLSGAFPVSFNQMIQIVSDGLKVKRKVFHF 225
>gi|448361018|ref|ZP_21549643.1| NAD-dependent epimerase/dehydratase [Natrialba asiatica DSM 12278]
gi|445652391|gb|ELZ05287.1| NAD-dependent epimerase/dehydratase [Natrialba asiatica DSM 12278]
Length = 347
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 10/149 (6%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG---DVVKP-DAGHVQVEKYI 218
+D R V A GV++ +ISS +Y D P E + V P +Q EK +
Sbjct: 84 TIDGTRNVLWAAHEGGVERVCYISSTAVYGTHDTHPITEESPLEGVGPYGEAKIQAEK-V 142
Query: 219 SENFSNWAS----FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL 274
E+F RP+ IG + FD I VP+ G G + HV DL
Sbjct: 143 CEDFRRMGLCVPILRPKTFIGP-QRLGVFQVLFDWIEDGANVPLVGWGTNQYQLLHVHDL 201
Query: 275 SSMLTLAVENPEAASSNIFNLVSDRAVTL 303
+ + L + + + A ++ FN+ +D T+
Sbjct: 202 LTAIDLLLTDDKEAVNSTFNVGTDEFTTM 230
>gi|146278465|ref|YP_001168624.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC
17025]
gi|145556706|gb|ABP71319.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC
17025]
Length = 368
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
G Q + HVRD++ LA+E P+AA + N+ S A T+ G+A+L A A G P EI
Sbjct: 243 GEQKRDFVHVRDVARAFRLALETPDAA-GEVINVGSGTAYTISGVARLLAGAMGRP-EIT 300
Query: 322 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 368
P+ ++ + RN +A+ A+ ILG+ L + L E
Sbjct: 301 ---PEI--LNRARTGDIRNC--FADIGKARAILGFEPRHRLEDSLDE 340
>gi|219848818|ref|YP_002463251.1| NAD-dependent epimerase/dehydratase [Chloroflexus aggregans DSM
9485]
gi|219543077|gb|ACL24815.1| NAD-dependent epimerase/dehydratase [Chloroflexus aggregans DSM
9485]
Length = 346
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 101/270 (37%), Gaps = 36/270 (13%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN--RFNEIVSAG 133
+VLI +GG +G LA+ LL G+ V + + PF+ N+I
Sbjct: 4 RVLI----TGGAGFLGINLARYLLARGYIVRSLDIA----------PFDYPERNQIEEHT 49
Query: 134 GKTVWGDPAEVGNVVGGVTFDVVL----------DNNGKNLDAVRPVADWAKSSGVKQFL 183
G D A V + GV F V D ++D R V + A+ GV++ +
Sbjct: 50 GDI--RDRAAVDRAMQGVRFVVHTAAALPLYSPADIFSTDIDGTRNVLESARDHGVERVV 107
Query: 184 FISSAGIYKPADEPPHVEGD----VVKPDAGHVQVEKYISENFSNWAS---FRPQYMIGS 236
ISS +Y D P VE D V V+ E+ E RP+ +G
Sbjct: 108 HISSTAVYGIPDHHPLVETDPLSGVGPYGEAKVKAEELCLEFRKAGMCVPILRPKSFVGP 167
Query: 237 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
+D + P+PG+G + V DL + L + ++ FN+
Sbjct: 168 -ERLGIFAMLYDWAMEGHNFPLPGNGKNRYQLLDVEDLCEAIVLCLTLDRDRVNDTFNIG 226
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 326
+ T+ + AAG I+ + K
Sbjct: 227 AKEFTTIKEDFQAVLDAAGYGKRIITFPAK 256
>gi|153806516|ref|ZP_01959184.1| hypothetical protein BACCAC_00780 [Bacteroides caccae ATCC 43185]
gi|149131193|gb|EDM22399.1| NAD dependent epimerase/dehydratase family protein [Bacteroides
caccae ATCC 43185]
Length = 339
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 66/161 (40%), Gaps = 19/161 (11%)
Query: 179 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 227
KQ++FISSA Y KP + P E K +A V + Y + F
Sbjct: 88 TKQYIFISSASAYQKPQTDYRITESTPLVNPFWEYSRNKIEAEEVLMTAYRTTGFPV-TI 146
Query: 228 FRPQYMIG------SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
RP + S + RI+ +PV IPG G + H +D +
Sbjct: 147 VRPSHTYNGTKPPVSVHGAKGNWQILKRILDGKPVIIPGDGSSLWTLTHSKDFAKGYVGL 206
Query: 282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
+ NP A N F++ +D ++T + + + A A G P+ +H
Sbjct: 207 MANPHAI-GNAFHITTDESMTWNQIYETIADALGKPLNALH 246
>gi|423438847|ref|ZP_17415828.1| hypothetical protein IE9_05028 [Bacillus cereus BAG4X12-1]
gi|401115974|gb|EJQ23820.1| hypothetical protein IE9_05028 [Bacillus cereus BAG4X12-1]
Length = 290
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 21/123 (17%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPFNRFNEIVS 131
KKVL++ GG G YL + LL GH+VTI T G D ++K+ +R
Sbjct: 2 KKVLVL----GGTRFFGKYLVEALLQEGHDVTIATRGITEDSFGSRVKRLIVDR------ 51
Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
D ++ +G ++D+V DN + +A + + + + K+++ SS +Y
Sbjct: 52 -------EDEKQLAERLGDKSYDIVYDNLCYSSNAAKVICEVLRGK-TKKYVMTSSMAVY 103
Query: 192 KPA 194
+PA
Sbjct: 104 EPA 106
>gi|386400376|ref|ZP_10085154.1| nucleoside-diphosphate-sugar epimerase [Bradyrhizobium sp. WSM1253]
gi|385741002|gb|EIG61198.1| nucleoside-diphosphate-sugar epimerase [Bradyrhizobium sp. WSM1253]
Length = 325
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 129/318 (40%), Gaps = 46/318 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G L + L +V ++TV + D + F+ + ++ A+
Sbjct: 16 AGHRGMVGSALVRRL--GREDVNLVTVDRRDVDLCNQDAV--FDWFAKTRPEVIFVAAAK 71
Query: 144 VGNVVGGVTF--DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEP--- 197
VG +V T + + DN + + A +G ++ +F+ S+ IY K A +P
Sbjct: 72 VGGIVANDTLRAEFIYDNIAIAANVIHA----AYLNGAEKLMFLGSSCIYPKLAPQPLRE 127
Query: 198 ---------PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEE---- 244
P E + AG VE Y + S++ S P + G G+N E+
Sbjct: 128 DTVLSGPLEPTNEPYAIAKIAGIKMVEAYRRQFGSDFISVMPTNLYGPGDNYHPEQSHVV 187
Query: 245 ------WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
+ ++ + V + G+G +V D++ ++ +S+ + N+ +
Sbjct: 188 AALIRRFHEAKVAGAKSVAVWGTGTPRREFLYVDDMADACVCLMKT--YSSAELINIGTG 245
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS 358
+T+ A++ A+ G EI + G K R AK LGWR+
Sbjct: 246 EDITIAEFARVVAEIVGYSGEIAFDSSRPDGTPRK---------LLDVSRLAK--LGWRA 294
Query: 359 TTNLPEDLKERFEEYVKI 376
T L + +++ +++++ +
Sbjct: 295 RTRLTDGMRQTYQDFLAV 312
>gi|294875223|ref|XP_002767230.1| nad dependent epimerase/dehydratase, putative [Perkinsus marinus
ATCC 50983]
gi|239868776|gb|EEQ99947.1| nad dependent epimerase/dehydratase, putative [Perkinsus marinus
ATCC 50983]
Length = 194
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 23/152 (15%)
Query: 252 RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 311
R + I G G+QF + HV+D+ + LA +N + S NL S A T+ +A L +
Sbjct: 26 RGEELTIEGDGLQFRDFVHVKDIGRGIILAYQNDQVRSGQPINLGSGEAHTVQELADLIS 85
Query: 312 QAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF---YAEPRAAKDILGWRSTTNLPEDLKE 368
++ P R A+ AK++LGW + N ++++
Sbjct: 86 -------------------SNQRHVPARKNDLRGTLADTCKAKELLGWSTRKNFRDEMRR 126
Query: 369 RFEEYVKIGRDKKAMQFEIDDKILESLKVPIP 400
E+ + GR + + LE L+ IP
Sbjct: 127 IIEDTL-AGRGLYLSHWFQQAETLEWLEDRIP 157
>gi|114566248|ref|YP_753402.1| nucleotide sugar epimerase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114337183|gb|ABI68031.1| nucleotide sugar epimerase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 323
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 84/203 (41%), Gaps = 22/203 (10%)
Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDV---VKPDAGHVQVEKYISENFS-----NW 225
K GV++F+ S++ +Y + P E V + P A + + ++ + +
Sbjct: 115 CKEFGVRKFVLASTSSLYAGQEMPFKEELPVNTPISPYAASKKAAEMMAYTYHYLYGLDI 174
Query: 226 ASFRPQYMIGSGNNKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
FR + G D + F I+ P+ + G G Q + +V D++ L ++
Sbjct: 175 TVFRYFTVYGPAGRPDMSIFRFIKWIMEGTPLQVFGDGSQRRDFTYVDDIARGTVLGLK- 233
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFY 344
I NL + TL +L + G EI + + A I A +
Sbjct: 234 --PMGYEIINLGNSNPDTLSKTIELIEEYTGKKTEIQYKEFHKADISAT----------W 281
Query: 345 AEPRAAKDILGWRSTTNLPEDLK 367
A A+++LGW++ TNLPE +K
Sbjct: 282 ANISKAQNLLGWQAKTNLPEGIK 304
>gi|423384592|ref|ZP_17361848.1| hypothetical protein ICE_02338 [Bacillus cereus BAG1X1-2]
gi|423529049|ref|ZP_17505494.1| hypothetical protein IGE_02601 [Bacillus cereus HuB1-1]
gi|401639262|gb|EJS57001.1| hypothetical protein ICE_02338 [Bacillus cereus BAG1X1-2]
gi|402449917|gb|EJV81752.1| hypothetical protein IGE_02601 [Bacillus cereus HuB1-1]
Length = 341
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 43/240 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G K F +++
Sbjct: 2 KILIL----GGTRFLGRAFVEEALKRGHEVTLFNRG------TNKEIFPEVEQLI----- 46
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + +DVV+D G + +R V + A +K ++FISS +YK
Sbjct: 47 ---GDRNNNVSSLENRKWDVVVDTCGFSPHHIRNVGE-ALHDNIKHYIFISSLSVYKDWI 102
Query: 196 EPPHVE----------GDVVKP-DAGHVQVEKYIS--------ENFSNW----ASFRPQY 232
PPH++ GD +K + G V +Y E W R
Sbjct: 103 -PPHIKEDYILQSEPTGDQIKAVENGEVSPYEYYGALKVLCEKEAEKYWPGRVLHVRAGL 161
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G + D ++ R+ + V +PG + I ++D+++ EN +A + NI
Sbjct: 162 LSGMFDYTDRLPYWIGRVAKGGKVLVPGRKGRPVQIVDIKDVANWGLNMAENNKAGTFNI 221
>gi|163851458|ref|YP_001639501.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens
PA1]
gi|163663063|gb|ABY30430.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens
PA1]
Length = 307
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 88/222 (39%), Gaps = 49/222 (22%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G IG +L + L G+ V ++ R E+ V GD A
Sbjct: 9 TGATGFIGRHLLRALSERGYRVRVL--------------LRRPVEVPEGASGAVVGDLAR 54
Query: 144 VGNVVGGVT-FDVVLDNNG---------------KNLDAVRPVADWAKSSGVKQFLFISS 187
N+ +T D V+ + G N +A R +AD A+ + V +F+F+SS
Sbjct: 55 PMNMAAALTGVDAVVHSAGLAHAMSGAPEDDFRNSNTEATRKLADAAQRARVGRFVFLSS 114
Query: 188 ----AGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSNWASFRPQYMIGSGNN 239
AG PA P E D +P + E+ + E +W + RP + G+G
Sbjct: 115 IRAQAGSSAPA---PLSEADAPEPTDPYGRSKLAAEEALGETGLDWVALRPVLVYGAGVK 171
Query: 240 KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
+ ++ R P P+P ++A R L S+ +LA
Sbjct: 172 GNMAALL--KLART-PYPLP-----LASLAGRRSLVSVESLA 205
>gi|384099636|ref|ZP_10000721.1| UDP-glucose 4-epimerase [Imtechella halotolerans K1]
gi|383832543|gb|EID72015.1| UDP-glucose 4-epimerase [Imtechella halotolerans K1]
Length = 323
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 26/218 (11%)
Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQY- 232
++ +G+K+F++ +S+ Y ++ P VE + KP + + V KY++E +++ F Y
Sbjct: 109 SRDAGIKRFVYAASSSTYGDSESLPKVENVIGKPLSPYA-VTKYVNELYAD--VFSKTYG 165
Query: 233 --MIG-------------SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 277
+IG +G F ++++ I G+G + ++ ++ M
Sbjct: 166 MELIGLRYFNVFGRRQDPNGAYAAVIPLFVKQLMKHEAPTINGAGDYSRDFTYIDNVIQM 225
Query: 278 --LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
L + ENPEA ++ V DR +D + L + + EI + +P G +
Sbjct: 226 NELAMLTENPEAINTVYNTAVGDRTTLVDLVDYLKSYLSEYDSEIANINP-IHGPNRVGD 284
Query: 336 FPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 373
P H A A +LG+ T + + LKE + Y
Sbjct: 285 IP----HSLASIEKASKLLGYYPTHTIDKGLKEAVQWY 318
>gi|423218422|ref|ZP_17204918.1| hypothetical protein HMPREF1061_01691 [Bacteroides caccae
CL03T12C61]
gi|392627925|gb|EIY21960.1| hypothetical protein HMPREF1061_01691 [Bacteroides caccae
CL03T12C61]
Length = 339
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 80/201 (39%), Gaps = 22/201 (10%)
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNL-DAVRPVADWAKSSGVKQFLFISSAGIY-KPADE- 196
D V + ++DVV G D R + + + KQ++FISSA Y KP +
Sbjct: 50 DEQAVAKAIAHESYDVVAQFIGYTAKDVERDIRLFQHKT--KQYIFISSASAYQKPQTDY 107
Query: 197 ---------PPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIG------SGNNKD 241
P E K +A V + Y + F RP + S +
Sbjct: 108 RITESTPLVNPFWEYSRNKIEAEEVLMTAYRTTGFPV-TIVRPSHTYNGTKPPVSVHGAK 166
Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
RI+ +PV IPG G + H +D + + NP A N F++ +D ++
Sbjct: 167 GNWQILKRILDGKPVIIPGDGSSLWTLTHSKDFAKGYVGLMANPHAI-GNAFHITTDESM 225
Query: 302 TLDGMAKLCAQAAGLPVEIVH 322
T + + + A A G P+ +H
Sbjct: 226 TWNQIYETIADALGKPLNALH 246
>gi|374573034|ref|ZP_09646130.1| nucleoside-diphosphate-sugar epimerase [Bradyrhizobium sp. WSM471]
gi|374421355|gb|EHR00888.1| nucleoside-diphosphate-sugar epimerase [Bradyrhizobium sp. WSM471]
Length = 325
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 132/318 (41%), Gaps = 46/318 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G LA+ L + +V ++TV D + F+ I + ++ A+
Sbjct: 16 AGHRGMVGSALARRL--AREDVKLVTVDRREVDLRNQAAV--FDWIARTRPQVIFLAAAK 71
Query: 144 VGNVVGGVTF--DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEP--- 197
VG +V T + + DN + ++ A +G ++ +F+ S+ IY K A +P
Sbjct: 72 VGGIVANNTLRAEFIYDNIAIAANVIQA----AHRNGAEKLMFLGSSCIYPKLAAQPLRE 127
Query: 198 ---------PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFF 247
P E + AG E Y S+ S++ S P + G G+N E
Sbjct: 128 DSVLTGPLEPTNEPYAIAKIAGIKMAEAYRSQYGSDFISVMPTNLYGPGDNYHPEMSHVV 187
Query: 248 DRIVRK---------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
++R+ + V + G+G +V D++ ++ +S+ + N+ +
Sbjct: 188 AALIRRFHEAKVSGAKSVIVWGTGTPRREFLYVDDMADACVHLMKT--YSSAELVNVGTG 245
Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS 358
+T+ A++ A+ G EI + G K R AK LGWR+
Sbjct: 246 EDITIADFARVVAETVGYGGEISFDSSRPDGTPRK---------LLDVSRLAK--LGWRA 294
Query: 359 TTNLPEDLKERFEEYVKI 376
T L + +++ +++++ +
Sbjct: 295 RTWLTDGMRQTYQDFLAV 312
>gi|309789950|ref|ZP_07684526.1| NAD-dependent epimerase/dehydratase [Oscillochloris trichoides
DG-6]
gi|308227970|gb|EFO81622.1| NAD-dependent epimerase/dehydratase [Oscillochloris trichoides DG6]
Length = 320
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 172 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV----VKPDAGHVQVEKYISENFSNWAS 227
+ A+ GV+QF+ S++ +Y A++ P E D + P A + + ++ F + +
Sbjct: 112 ELARQYGVEQFVLASTSSVYGKAEKLPFEEDDRTDQPLSPYAATKKAAEVLAYTFHSLYA 171
Query: 228 F-----RPQYMIGSGNNKDCEEWFF-DRIVRKRPVPIPGSGMQ-FTNIAHVRDLSSMLTL 280
R + G D + F D++VR P + G+ F + +V D+ + +
Sbjct: 172 MPMSVVRFFTVYGPRGRPDMTPYLFVDKMVRGEPFVLFNRGINLFRDYTYVDDIVAGVVA 231
Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI 320
A++ P A IFNL + + V + L Q G P +I
Sbjct: 232 ALDRP--AGYQIFNLGNSQPVEMCRFVGLLEQITGYPAQI 269
>gi|115523528|ref|YP_780439.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
BisA53]
gi|115517475|gb|ABJ05459.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
BisA53]
Length = 337
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 97/243 (39%), Gaps = 44/243 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK--PPFNRFNEIVSAGGKTVWGD- 140
+GG G L +LL SG++ T+ SD + K P F K V GD
Sbjct: 11 TGGAGYAGSLLVPQLLNSGYKATVYDTCFFGSDFLPKDNPNF-----------KLVEGDI 59
Query: 141 --PAEVGNVVGGVTFDVVL-----------DNN---GKNLDAVRPVADWAKSSGVKQFLF 184
A++ G+ V L D N NLDA P+ AK +GVK+F++
Sbjct: 60 RDTAKLAQAFQGIDCVVSLACISNDASFELDENLSTSINLDAFEPMVLAAKKAGVKRFVY 119
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGHVQ--------VEKYISENFSNWASFRPQYMIGS 236
SS+ +Y ++ P E + P + + ++K+ ++F FRP + G
Sbjct: 120 ASSSSVYGVSEHPDVTEDHPLLPLTLYNKYKGMCEPLLQKHADDSFVGVI-FRPATLCGY 178
Query: 237 GNNKDCE---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA-SSNI 292
+ + + V + + G G N+ HV+D + L + P A I
Sbjct: 179 APRQRLDLSVNILTNHAVNNNKITVFGGGQMRPNL-HVQDYCDAVELLMTAPAAKIQKQI 237
Query: 293 FNL 295
FN+
Sbjct: 238 FNI 240
>gi|78188649|ref|YP_378987.1| UDP-glucose 4-epimerase [Chlorobium chlorochromatii CaD3]
gi|78170848|gb|ABB27944.1| UDP-glucose 4-epimerase [Chlorobium chlorochromatii CaD3]
Length = 327
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 14/139 (10%)
Query: 240 KDCEEWFFDRIVR----KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
KD + F VR +P+ + G GMQ + +V D L LA N ++A+ ++NL
Sbjct: 189 KDARQTFLGIWVRLLIEGKPIKVFGDGMQLRDFNYVDDCVDALLLAGVN-DSANGKVYNL 247
Query: 296 VSDRAVTLDGMAKLCAQ-AAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 354
S V L +A++ G E+V + P+ ID +Y++ L
Sbjct: 248 GSTEVVGLKTLAEMMVNFYDGATYELVPFPPERKAIDIGD--------YYSDFSLITKEL 299
Query: 355 GWRSTTNLPEDLKERFEEY 373
GW L + LK+ Y
Sbjct: 300 GWEPKVGLQDGLKKTVAYY 318
>gi|423458753|ref|ZP_17435550.1| hypothetical protein IEI_01893 [Bacillus cereus BAG5X2-1]
gi|401145916|gb|EJQ53437.1| hypothetical protein IEI_01893 [Bacillus cereus BAG5X2-1]
Length = 328
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + ++ GVK+ + +S+ IY DE +V + PD H K+++E
Sbjct: 88 NVLGTKHIIEGSQKYGVKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKHMAE 147
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 148 QAIDQAFTHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 205
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D V L
Sbjct: 206 NVVDALLLCMHSPKHTLGQKYNITNDERVNL 236
>gi|432333402|ref|ZP_19585184.1| UDP-galactose 4-epimerase [Rhodococcus wratislaviensis IFP 2016]
gi|430779679|gb|ELB94820.1| UDP-galactose 4-epimerase [Rhodococcus wratislaviensis IFP 2016]
Length = 330
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 104/272 (38%), Gaps = 51/272 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G A+ LL GH T++ V D ++ P AG + V D A
Sbjct: 6 TGGAGYVGSVCAQRLLECGH--TVVIVDDLSTGNADAVP---------AGAEFVEEDVAS 54
Query: 144 VG-NVVGGVTFDVVLDNNGKNL---DAVRPVADW-------------AKSSGVKQFLFIS 186
V+GG FD VL ++L V P W +SSG + +F S
Sbjct: 55 AAERVLGGAEFDGVLHFAARSLVGESVVTPETYWNANVVKTLTLLEAMRSSGTGRLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIGS-- 236
+A Y + P E +P + + I +++A S R + G+
Sbjct: 115 TAATYGSPESVPITEDAPTRPTNPYGATKLAIDHAITSYAVAHGLAACSLRYFNVAGAYA 174
Query: 237 --GNNKDCEEWFFDRIV-----RKRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVE 283
G N+ E ++ R+ + + G+ G + H+RDL+ LA+E
Sbjct: 175 GLGENRLVETHLIPLVLQVAAGRRDEISVFGTDWPTPDGTAVRDYIHIRDLAEAHILALE 234
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG 315
+ + ++NL + ++ + C + G
Sbjct: 235 STRPGTHRVYNLGTGTGFSVREVISSCERVTG 266
>gi|318060938|ref|ZP_07979659.1| hypothetical protein SSA3_23540 [Streptomyces sp. SA3_actG]
gi|318076765|ref|ZP_07984097.1| hypothetical protein SSA3_08592 [Streptomyces sp. SA3_actF]
Length = 345
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 43/227 (18%)
Query: 174 AKSSG-VKQFLFISSAGIYKPADEPP-----HVEGDVVKPDA--------GHVQVEKYIS 219
A+ SG +K+ +F+SSA +Y E P EGD + P + G Q +S
Sbjct: 122 ARHSGTLKRLVFVSSASVYGRGPEAPTRAARFSEGDELHPVSVYANTKVWGEHQTALALS 181
Query: 220 ENFSNWASFR-------PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
++A R PQ ++ ++ W+ R P+P+ G G Q + HV
Sbjct: 182 GRDDSYAVVRYFSVYGEPQ-VVKENSHSWVVAWYAMRAALGLPLPLNGGGKQIRDFVHVD 240
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA----QAAGLPVEIVHYDPKAA 328
D++ LA +P A + + N+ + RA ++ +A L +AA + + DP A
Sbjct: 241 DIADATLLAALSPRAHRATL-NVGTGRATSIREIADLVRLHHPEAALVHTPLPQGDPLGA 299
Query: 329 GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
AE K+IL W + E + +R+ +++
Sbjct: 300 ---------------RAETTRMKEILRWEHAIGIEEGV-QRYMRWLE 330
>gi|429331901|ref|ZP_19212641.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida CSV86]
gi|428763412|gb|EKX85587.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida CSV86]
Length = 309
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 102/250 (40%), Gaps = 32/250 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFN------EIV--SA 132
+GG IG +L LL GH V ++ + G ++ ++ P E+V +
Sbjct: 9 TGGAGFIGSHLCDALLQKGHSVRVLDDLSTGKRDNLQLGHPGLQLIEGDVADAELVKRAV 68
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
G A V +V V D + + N V + + +GVK+ LF SSA +Y
Sbjct: 69 EGCRAVVHLAAVASVQASV--DDPVKTHQSNFIGTLNVCEAMRLAGVKRVLFASSAAVYG 126
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD-- 241
E + D+ K +K SE + ++ +R Q+ + G +D
Sbjct: 127 NNGEGESISEDIAKAPLTPYASDKLASEQYLDF--YRRQHGLEPVVFRFFNIFGPRQDPS 184
Query: 242 -----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
F +R + P+ + G G Q + +V DL +++ A+E P + N+
Sbjct: 185 SPYSGVISIFCERALSGTPITVFGDGEQTRDFLYVSDLVAVMVQALEMPRVEEGAV-NIG 243
Query: 297 SDRAVTLDGM 306
++A +L+ +
Sbjct: 244 LNQATSLNQL 253
>gi|424925157|ref|ZP_18348518.1| Nucleoside-diphosphate-sugar epimerase [Pseudomonas fluorescens
R124]
gi|404306317|gb|EJZ60279.1| Nucleoside-diphosphate-sugar epimerase [Pseudomonas fluorescens
R124]
Length = 309
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 110/276 (39%), Gaps = 39/276 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNR------FNEIVSAG---- 133
+GG IG +L LL +GH V I+ D ++ K P + ++ A
Sbjct: 9 TGGAGFIGSHLTDALLATGHSVRILD--DLSTGKRANLPLDNPQVELIVGDVADAALVAQ 66
Query: 134 ---GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
G + A V +V V D + + N V + + +GVK+ L+ SSA +
Sbjct: 67 AMQGCSAVAHLAAVASVQASV--DDPVKTHQSNFIGTLNVCEAMRQAGVKRVLYASSAAV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD 241
Y E ++ D K +K E++ ++ +R Q+ + G +D
Sbjct: 125 YGNNGEGESIDEDTPKAPLTPYASDKLAGEHYFDF--YRRQHGLEPVIFRFFNIFGPRQD 182
Query: 242 -------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
F +R + P+ + G G Q + +V DL +L A++ PE N
Sbjct: 183 PSSPYSGVISIFSERAQKGLPITLFGDGEQTRDFLYVEDLVDVLVQAIDKPE-VEVGAMN 241
Query: 295 LVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+ ++A+ L M + + G LP V Y P +G
Sbjct: 242 VGWNQAMNLKQMLQALQEVVGELPP--VSYGPARSG 275
>gi|423407329|ref|ZP_17384478.1| hypothetical protein ICY_02014 [Bacillus cereus BAG2X1-3]
gi|401659305|gb|EJS76791.1| hypothetical protein ICY_02014 [Bacillus cereus BAG2X1-3]
Length = 340
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 111/272 (40%), Gaps = 45/272 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G ++K P + S G +
Sbjct: 2 KILIL----GGTRFLGRAFVEEALNRGHEVTLFNRG---TNKEIFPEVEQ-----SIGDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + N +DVV+D G + +R V + K + VK ++FISS +YK
Sbjct: 50 N--GDVLSLEN----RKWDVVVDTCGFSPHHIRNVGEVLKDN-VKHYIFISSLSVYKDWI 102
Query: 196 EPPHVEGD-VVKPDAGHVQVEKYISENFSNWASF----------------------RPQY 232
P H++ D +++P+ Q++ + S + + R
Sbjct: 103 -PHHIKEDYILQPEPTGEQIKAVENGEISPYEHYGALKVLCEKEAEKYWPGRVLHVRAGL 161
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G + D ++ RI + V +PG + ++D++S EN + + NI
Sbjct: 162 LSGMFDYTDRLPYWVQRIAKGGKVLVPGRKDRPVQFVDIKDVASFGLNMAENNKVGTFNI 221
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
+ +T++ + C + E V D
Sbjct: 222 TG--PNYEMTMEELLNTCKKVTNSDAEFVWID 251
>gi|320104141|ref|YP_004179732.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644]
gi|319751423|gb|ADV63183.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644]
Length = 364
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 69/177 (38%), Gaps = 39/177 (22%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---------- 212
N+ A++ + D A VK+F+ +SS G+Y+ D H D P A H
Sbjct: 100 NVHALKFLLDAAVEEKVKRFVHVSSLGVYEGRD---HFGTDETVPPAIHALDGYTRSKIE 156
Query: 213 ---QVEKYISENFSNWASFRPQYMIGSGNN----------KDCEEWFFDRIVRKRPVPIP 259
V Y+ E RP ++ G + +D + W+
Sbjct: 157 AEDLVMSYVKEKGLAATVVRPGFIYGERDRTVIPKLLKALRDGKFWYL------------ 204
Query: 260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL 316
GSG Q N +V++L + A E PEA IFN+ + V+ A+ AG+
Sbjct: 205 GSGEQALNCVYVKNLVHAIERAAEVPEAV-GEIFNITDGQPVSKKRFVTKVAELAGI 260
>gi|301054551|ref|YP_003792762.1| isoflavone reductase [Bacillus cereus biovar anthracis str. CI]
gi|300376720|gb|ADK05624.1| possible isoflavone reductase [Bacillus cereus biovar anthracis
str. CI]
Length = 340
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 114/273 (41%), Gaps = 47/273 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G + F +++ G +
Sbjct: 2 KILIL----GGTRFLGRAFVEEALQRGHEVTLFNRG------TNQEIFLEVEQLI--GDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + N +DVV+D G + +R V + K + ++ ++FISS +YK
Sbjct: 50 N--GDVSSLEN----RKWDVVIDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSVYKDWI 102
Query: 196 EPPHVEGD-VVKPDAGHVQVEKYISENFSNWASF----------------------RPQY 232
P H++ D +++P+ Q++ + S + + R
Sbjct: 103 -PHHIKEDYILQPEPTKEQIKAVENGEISPYEHYGALKVLCEKEAEEYWPRRVLHVRAGL 161
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G + D ++ +R+ + V +PG + I ++D+++ EN A I
Sbjct: 162 LSGMFDYTDRLPYWIERVAKGGKVLVPGRKTRPVQIVDIKDVANWGLNMAENKNAG---I 218
Query: 293 FNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYD 324
FN+ + +T++ + C + E V D
Sbjct: 219 FNVTGPNYDLTMEELLNTCKKVTHSDAEFVWVD 251
>gi|374626018|ref|ZP_09698432.1| hypothetical protein HMPREF0978_01752 [Coprobacillus sp.
8_2_54BFAA]
gi|373914544|gb|EHQ46359.1| hypothetical protein HMPREF0978_01752 [Coprobacillus sp.
8_2_54BFAA]
Length = 593
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 111/253 (43%), Gaps = 37/253 (14%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
K+VLI +G ++ IG + K L S E + T+ D K+ F++++ + G
Sbjct: 304 KRVLI----TGANSYIGESVEKWLNNSDDEYEVDTL-DMLDPNWKEYDFSKYDTVFHVAG 358
Query: 135 KTVWGDPAEVGNVVGGVTFDVVLDNNGK-NLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
A+VGNV D V K N D VA+ AK + VKQF+F+SS +Y
Sbjct: 359 IA----HADVGNVS-----DEVKQRYYKVNTDLTLEVANKAKEAEVKQFIFMSSMIVYSG 409
Query: 194 ADEPPHVEGDVVKPDA----------GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE 243
E H+ D KP A +++++ SE+F RP + G G+ +
Sbjct: 410 C-ETTHITKD-TKPKAENFYGDSKLQADLKLQEINSESFK-VVVVRPPMIYGKGSKGNYP 466
Query: 244 EWFFDRIVRKRPV-PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
+ ++ K PV PI + ++ H+ +L + L ++N E S +F +D
Sbjct: 467 Q--LAKLATKLPVFPIVDNK---RSMLHIDNLCEFIKLMIDNEE---SGVFFPQNDEYTN 518
Query: 303 LDGMAKLCAQAAG 315
M ++ A G
Sbjct: 519 TSDMVQMIANVKG 531
>gi|229173694|ref|ZP_04301236.1| NAD-dependent epimerase/dehydratase [Bacillus cereus MM3]
gi|228609793|gb|EEK67073.1| NAD-dependent epimerase/dehydratase [Bacillus cereus MM3]
Length = 341
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 122/293 (41%), Gaps = 49/293 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G K F +++ G +
Sbjct: 2 KILIL----GGTRFLGRAFVEEALQRGHEVTLFNRG------TNKEIFPEVEQLI--GDR 49
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + N +DVV+D G + +R V + K + ++ ++FISS +YK
Sbjct: 50 N--GDVSSLEN----RKWDVVIDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSVYKDWI 102
Query: 196 EPPHVEGD-VVKPDAGHVQVEKYISENFSNWASF----------------------RPQY 232
P H++ D +++P+ Q++ + S + + R
Sbjct: 103 -PHHIKEDYILQPEPTGDQIKAVENGEISPYEHYGALKVLCEKEAEKYWPGRVLHVRAGL 161
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G + D ++ R+ + V +PG + I ++D+++ EN +A I
Sbjct: 162 LSGMFDYTDRLPYWIGRVAKGGKVLVPGRKNRPVQIVDIKDVANWGLNMAENNKAG---I 218
Query: 293 FNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFY 344
FN+ + +T+ G+ C + E V + + ++ K P+ M +
Sbjct: 219 FNVTGPNYELTMAGLLNTCKKVTNSDAEFVWVE--ESFMNEHKVQPWTEMPLW 269
>gi|325276930|ref|ZP_08142617.1| NAD-dependent epimerase/dehydratase [Pseudomonas sp. TJI-51]
gi|324097945|gb|EGB96104.1| NAD-dependent epimerase/dehydratase [Pseudomonas sp. TJI-51]
Length = 314
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 107/269 (39%), Gaps = 25/269 (9%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIVSAG---GKTV 137
+GG IG +LA LL SG V ++ + G ++ ++ P V+ + V
Sbjct: 14 TGGAGFIGSHLADALLASGRTVRVLDNLSTGKRSNLQLANPRLQLIEGDVADAVLVAQAV 73
Query: 138 WGDPAEVG-NVVGGV--TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA 194
G A V V V + D + + N V + + +GVK+ LF SSA +Y
Sbjct: 74 SGCQAVVHLAAVASVQASVDDPVRTHQSNFIGTLNVCEAMRLAGVKRVLFASSAAVYGNN 133
Query: 195 DEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS---------FRPQYMIG-----SGNNK 240
E + D K +K SE + ++ FR + G S
Sbjct: 134 GEGASIAEDTPKAPLTPYASDKLASEYYLDFYQRQHGVEPVVFRFFNIYGPRQDPSSPYS 193
Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
F +R + PV + G G Q + V DL +L +E P A + + N+ ++A
Sbjct: 194 GVISIFAERSQKSLPVSVFGDGEQTRDFVFVSDLIKLLMQGLERPGAVTGAV-NVGLNQA 252
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
+L+ + +Q G E V+Y P G
Sbjct: 253 TSLNQVLAALSQVLGKTPE-VNYQPARPG 280
>gi|384105020|ref|ZP_10005955.1| UDP-galactose 4-epimerase [Rhodococcus imtechensis RKJ300]
gi|383836870|gb|EID76272.1| UDP-galactose 4-epimerase [Rhodococcus imtechensis RKJ300]
Length = 330
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 104/272 (38%), Gaps = 51/272 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G A+ LL GH T++ V D ++ P AG + V D A
Sbjct: 6 TGGAGYVGSVCAQRLLECGH--TVVIVDDLSTGNADAVP---------AGAEFVEEDVAS 54
Query: 144 VG-NVVGGVTFDVVLDNNGKNL---DAVRPVADW-------------AKSSGVKQFLFIS 186
V+GG FD VL ++L V P W +SSG + +F S
Sbjct: 55 AAERVLGGAEFDGVLHFAARSLVGESVVTPETYWNANVVKTLTLLEAMRSSGTGRLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIGS-- 236
+A Y + P E +P + + I +++A S R + G+
Sbjct: 115 TAATYGSPESVPITEEAPTRPTNPYGATKLAIDHAITSYAVAHGLAACSLRYFNVAGAYA 174
Query: 237 --GNNKDCEEWFFDRIV-----RKRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVE 283
G N+ E ++ R+ + + G+ G + H+RDL+ LA+E
Sbjct: 175 GLGENRLVETHLIPLVLQVAAGRRDEISVFGTDWPTPDGTAVRDYIHIRDLAEAHILALE 234
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG 315
+ + ++NL + ++ + C + G
Sbjct: 235 STRPGTHRVYNLGTGTGFSVREVISSCERVTG 266
>gi|317476012|ref|ZP_07935266.1| NAD dependent epimerase/dehydratase [Bacteroides eggerthii
1_2_48FAA]
gi|316907842|gb|EFV29542.1| NAD dependent epimerase/dehydratase [Bacteroides eggerthii
1_2_48FAA]
Length = 314
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 49/270 (18%), Positives = 106/270 (39%), Gaps = 36/270 (13%)
Query: 112 DENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVA 171
D + + +K+ RF+ I+ G++ G ++F+ + + N + +
Sbjct: 57 DYDIEIIKQLDKYRFDSIIHIAGQSS-----------GEISFEKPVYDLQTNTQSTLMLL 105
Query: 172 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS---- 227
D+AK +G K+F+F SS +Y E V D + V K SEN+ S
Sbjct: 106 DYAKRTGCKEFIFASSMSVYGDH-EISLVSEDTLAVPKSFYAVGKLASENYMRIYSSMYG 164
Query: 228 -----FRPQYMIGSGNNKD-----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 277
R + G+G N D + +R+ + + GS +F + ++ D+
Sbjct: 165 IKCTALRFFNVYGAGQNMDNLKQGMASIYLALALREHHITVKGSKDRFRDFVYIDDIVDA 224
Query: 278 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP 337
+ + + ++N+ + + + + + + ++ LP + H + + P
Sbjct: 225 VQKTMNRTKGELFEVYNVANCKKIHVHEIVDIIEKS--LPFTVTH--------EYIEGTP 274
Query: 338 FRNMHFYAEPRAAKDILGWRSTTNLPEDLK 367
M Y + + LGW + + E ++
Sbjct: 275 GDQMGVYGKNDKIRKDLGWEAQVSFEEGMQ 304
>gi|119872996|ref|YP_931003.1| NAD-dependent epimerase/dehydratase [Pyrobaculum islandicum DSM
4184]
gi|119674404|gb|ABL88660.1| NAD-dependent epimerase/dehydratase [Pyrobaculum islandicum DSM
4184]
Length = 322
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F + +R P+ + G G+Q + A+V D+ + L + + + E + ++N+ SD VT+
Sbjct: 203 FLVQALRGEPITVHGDGLQTRSFAYVSDVVNGL-ITIAHCERCAGEVYNVGSDEEVTILE 261
Query: 306 MAKLCAQAAGLPVEIVH 322
+AKL + AG IVH
Sbjct: 262 LAKLVKEVAGSASPIVH 278
>gi|86740009|ref|YP_480409.1| methyltransferase FkbM [Frankia sp. CcI3]
gi|86566871|gb|ABD10680.1| Methyltransferase FkbM [Frankia sp. CcI3]
Length = 619
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 94/242 (38%), Gaps = 27/242 (11%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--- 140
+GG +G + L GH V + D + K+++ G TV GD
Sbjct: 6 TGGTGFLGSRVVDRALADGHRVVGLARSDAAATKLRR-----------HGAGTVRGDLDD 54
Query: 141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
PA + + +++ + A+++G+++ +F+S+ GI+ D P
Sbjct: 55 PATLLPAFREANCEALINIASLGFGHAETIVTAARAAGIRRAVFLSTTGIFTTLDPPSKR 114
Query: 201 EGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV-PIP 259
V E I+ + +W RP + G ++++ ++R+ PV P+P
Sbjct: 115 I---------RVAAEGTIAASGLDWTIIRPTMIYGGPDDRNMARLLA--LLRRVPVLPVP 163
Query: 260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 319
G G HV DL+ + L AA +++ A+T + A G V
Sbjct: 164 GGGHHLQQPVHVEDLARTV-LRATTTAAAIGRAYDVAGPEALTFRQVVITAGAAVGRRVI 222
Query: 320 IV 321
V
Sbjct: 223 CV 224
>gi|407723698|ref|YP_006843359.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti Rm41]
gi|407323758|emb|CCM72359.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti Rm41]
Length = 324
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 11/123 (8%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
+ +RI P I G G Q + HVRD++ LA ++ + +FN+ S +L
Sbjct: 196 WMERIAAGCPPIILGDGTQTLDFVHVRDIARANLLAAKS--GVTDEVFNVASGTETSLKD 253
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
+A+L A+ G +E Y+P A+K A+ R A+ +LG+++ +L E
Sbjct: 254 LAQLLARIMGSSIE-PQYEP------ARKVNAVTRR--LADMRKAERLLGFKTEISLEEG 304
Query: 366 LKE 368
L+E
Sbjct: 305 LRE 307
>gi|145295826|ref|YP_001138647.1| hypothetical protein cgR_1751 [Corynebacterium glutamicum R]
gi|417971575|ref|ZP_12612498.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum S9114]
gi|140845746|dbj|BAF54745.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344044057|gb|EGV39738.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum S9114]
Length = 329
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 125/324 (38%), Gaps = 83/324 (25%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDE-----NSDKMKKPPFNRFNEIVSAGG- 134
+GG +G A LL GH+VTI+ + G+ ++ ++ + E++S GG
Sbjct: 6 TGGAGYVGSVAAAVLLEHGHDVTIIDNFSTGNREAVPADARLIEGDVSDIVEEVLSEGGF 65
Query: 135 --------KTVWGDPAEV------GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK 180
+++ G+ E NVV +T LDA+R + GV
Sbjct: 66 EGVVHFAARSLVGESVEKPNEYWHDNVVTALTL----------LDAMR-------AHGVN 108
Query: 181 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQY 232
+F S+A Y D P E +P + + I +++A S R
Sbjct: 109 NLVFSSTAATYGEPDVVPITEDMPTQPTNAYGATKLSIDYAITSYAAAFGLAATSLRYFN 168
Query: 233 MIGS----GNNKDCEEWFFDRIV------RKR--------PVPIPGSGMQFTNIAHVRDL 274
+ G+ G N++ E ++ R++ P P G + H+ DL
Sbjct: 169 VAGAYGNIGENREVETHLIPLVLQVATGHREKIFMFGDDWPTP---DGTAVRDYIHILDL 225
Query: 275 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG--LPVEIVHYDPKAAGIDA 332
+ LA+E+ EA IFNL S ++ + ++C + G +P E+ P+ AG A
Sbjct: 226 AKAHVLALESNEAGKHRIFNLGSGDGYSVKQVVEMCREVTGHPIPAEVA---PRRAGDPA 282
Query: 333 KKAFPFRNMHFYAEPRAAKDILGW 356
A AK LGW
Sbjct: 283 T---------LIASSEKAKQELGW 297
>gi|444304648|ref|ZP_21140439.1| GDP-L-fucose synthase [Arthrobacter sp. SJCon]
gi|443483063|gb|ELT45967.1| GDP-L-fucose synthase [Arthrobacter sp. SJCon]
Length = 324
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 85/202 (42%), Gaps = 27/202 (13%)
Query: 142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEP--- 197
A+VG ++ TF V D NL V D A+ GV++ LF+ S+ IY K AD+P
Sbjct: 76 AKVGGILANNTFPV--DFLSDNLRIQVNVLDAAREFGVERLLFLGSSCIYPKFADQPIRE 133
Query: 198 ---------PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWF-- 246
P + + AG + ++ + W S P + G G+N E
Sbjct: 134 DSLLTGHLEPTNDAYAIAKIAGIMHIQAVRRQYGLPWISAMPTNLYGPGDNFSPEGSHVM 193
Query: 247 ------FDRIVRK-RPVPIP-GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
+D R PV GSG HV D+++ +EN + +S N+ +
Sbjct: 194 PALIRRYDEAARAGTPVVTNWGSGTPRREFLHVDDMAAACLHLLENYDGSSQ--VNVGTG 251
Query: 299 RAVTLDGMAKLCAQAAGLPVEI 320
VT+ +A L AQA G +I
Sbjct: 252 TDVTIRELATLVAQAVGYEGDI 273
>gi|218516332|ref|ZP_03513172.1| probable UDP-glucose 4-epimerase protein [Rhizobium etli 8C-3]
gi|417099845|ref|ZP_11959918.1| putative UDP-glucose 4-epimerase protein [Rhizobium etli CNPAF512]
gi|327192481|gb|EGE59435.1| putative UDP-glucose 4-epimerase protein [Rhizobium etli CNPAF512]
Length = 367
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 9/121 (7%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F R+ +P I G Q + HVRD++ LA+E P AAS ++ N+ S +A ++
Sbjct: 226 FGSRLANGQPPMIFEDGKQRRDFVHVRDVARAFRLALEKP-AASGHVINIGSGQAYSIAD 284
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
+A L A A G+P KA D + F A+ A+++LG+ +L
Sbjct: 285 VATLLADAMGVPEIAPDIMNKARSGDIRNCF--------ADISKARELLGFEPRYHLENS 336
Query: 366 L 366
L
Sbjct: 337 L 337
>gi|304408273|ref|ZP_07389921.1| NAD-dependent epimerase/dehydratase [Paenibacillus curdlanolyticus
YK9]
gi|304342742|gb|EFM08588.1| NAD-dependent epimerase/dehydratase [Paenibacillus curdlanolyticus
YK9]
Length = 338
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 107/278 (38%), Gaps = 44/278 (15%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---P 141
GG I + K+LL G E+ ++ G N E + AG + + D
Sbjct: 7 GGTGTISTAITKQLLAQGCELYLLNRGTRN-------------EELPAGARILQADINDE 53
Query: 142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVA---DWAKSSG-VKQFLFISSAGIYK-PADE 196
A V ++ +FDVV D A P D+ G KQF+FISSA Y+ P +
Sbjct: 54 ARVAELIADHSFDVVAD-----FIAFVPEQLERDYRLFHGKTKQFMFISSASAYQTPLSD 108
Query: 197 PPHVEGD-----VVKPDAGHVQVEKYISENFSNWA----SFRPQYM-----IGSGNNKDC 242
EG + + E+Y+ + + RP + I G +
Sbjct: 109 YRITEGTPLSNPCWEYSRNKIACEEYLVKQYREQGFPITIVRPSHTYDERSIPLGVHGSK 168
Query: 243 EEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
W R++ +PV I G G + H D + + N A ++ + SD V
Sbjct: 169 GTWQVAKRMLENKPVIIHGDGTSLWTMTHNSDFAKGFIGLMGNLHAIGESV-QITSDETV 227
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
T + + + A A G+ + VH +A +DA +R
Sbjct: 228 TWNQVYESIASALGVKLNAVHV--ASAFLDACSTEDYR 263
>gi|394988746|ref|ZP_10381581.1| NAD-dependent epimerase/dehydratase [Sulfuricella denitrificans
skB26]
gi|393792125|dbj|GAB71220.1| NAD-dependent epimerase/dehydratase [Sulfuricella denitrificans
skB26]
Length = 331
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 107/263 (40%), Gaps = 47/263 (17%)
Query: 142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEP--- 197
A+VG +V T+ D +NL V A S+ VK+ LF+ S+ IY K A +P
Sbjct: 83 AKVGGIVANNTYPA--DFIYQNLMIQSNVIHAAYSNEVKKLLFLGSSCIYPKFAPQPMKE 140
Query: 198 PHVEGDVVKPD---------AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEE-WFF 247
H+ V++P AG Y + +N+ S P + G G+N D +
Sbjct: 141 EHLLTGVLEPTNEPYAVAKIAGIKMCGAYNRQYDTNFMSVMPTNLYGLGDNYDLQNSHVM 200
Query: 248 DRIVRKR---------PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF-NLVS 297
++RK V + GSG + D++ +EN A + F N+
Sbjct: 201 PALIRKMHEAKIRGDAQVSVWGSGTPRREFLYGDDMADACVFLMENRNANDTGEFVNIGV 260
Query: 298 DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI---- 353
+T+ +A+ A+ G E+V K G P+ D+
Sbjct: 261 GEDITIRELAERVAKVVGFHGELVFDSSKPDGT----------------PQKLLDVTHLN 304
Query: 354 -LGWRSTTNLPEDLKERFEEYVK 375
LGWR+ T + E + + ++++++
Sbjct: 305 KLGWRAKTAMDEGIGKAYQDFMR 327
>gi|334321038|ref|YP_004557667.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti AK83]
gi|334098777|gb|AEG56787.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti AK83]
Length = 324
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 11/123 (8%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
+ +RI P I G G Q + HVRD++ LA ++ + +FN+ S +L
Sbjct: 196 WMERIAAGCPPIILGDGTQTLDFVHVRDIARANLLAAKS--GVTDEVFNVASGTETSLKD 253
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
+A+L A+ G +E Y+P A+K A+ R A+ +LG+++ +L E
Sbjct: 254 LAQLLARIMGSSIE-PQYEP------ARKVNAVTRR--LADMRKAERLLGFKTEISLEEG 304
Query: 366 LKE 368
L+E
Sbjct: 305 LRE 307
>gi|229819677|ref|YP_002881203.1| NAD-dependent epimerase/dehydratase [Beutenbergia cavernae DSM
12333]
gi|229565590|gb|ACQ79441.1| NAD-dependent epimerase/dehydratase [Beutenbergia cavernae DSM
12333]
Length = 310
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 34/219 (15%)
Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP--------DAGHVQVEKYISENFSNW 225
A GV++F+ SSA +Y + P E D + P G + Y +W
Sbjct: 110 AADHGVERFVLASSASVYGDPKKLPMHEDDELSPLTPYCISKRTGEDLLAYYQRRAGLSW 169
Query: 226 ASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
+ R + G G F +RI P I G G Q + HV D++ + L
Sbjct: 170 IALRFFNVYGPGQKTTAYYTSVINHFVNRIKNGEPPVIDGKGEQSMDFIHVHDIARAVVL 229
Query: 281 AVENPEAASSNI-FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
A+E+ + SN+ N+ + T+ +A++ A G VE + ++P+ + + A R
Sbjct: 230 AMESEQ---SNVPVNVGTGIDTTVADLARILIDAVGADVEPI-FNPRDVLVSRRAADTTR 285
Query: 340 NMHFYAEPRAAKDILGWRSTTNLPE-DLKERFEEYVKIG 377
AK++LG+ +PE +++ E +++G
Sbjct: 286 ----------AKEVLGF-----VPEIAVEDGMTELIRLG 309
>gi|256752415|ref|ZP_05493274.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter ethanolicus
CCSD1]
gi|256748684|gb|EEU61729.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter ethanolicus
CCSD1]
Length = 311
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 63/323 (19%), Positives = 122/323 (37%), Gaps = 50/323 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG IG +A+EL+ G +V I+ +N K F + + + + GD
Sbjct: 7 TGGAGFIGSNIAEELIKRGEKVRII----DNFSTGKMENIEEFKDKI----ELIEGDLKN 58
Query: 144 VGNV---VGGVTFDVV--------------LDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
+ +V V G+ + + L +N N+D + AK +GVK+ + +
Sbjct: 59 INDVKKAVEGIDYILHQAALSSVPRSVEDPLSSNANNIDGTLNLLVVAKEAGVKRVVIAA 118
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNN 239
S+ Y + P E P + + V KY+ E N + +Y G
Sbjct: 119 SSSAYGDTEILPKSEDMTPNPLSPYA-VTKYVEELYGKVFYNIYGLETVSLRYFNVFGPK 177
Query: 240 KDCEEW-------FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+D F +I++ I G G Q + ++ ++ LA + +
Sbjct: 178 QDPNSQYAAVIPKFITKILKGESPVIFGDGEQTRDFTYIDNVVEANILAATSKNVGHGEV 237
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 352
N+ ++L+ + + G ++ ++ P+ + H A AK
Sbjct: 238 INIACGERISLNQLVDKINEILGTNIKPLYDKPRIGDVK----------HSLASIEKAKK 287
Query: 353 ILGWRSTTNLPEDLKERFEEYVK 375
+LG+R + E L++ + Y K
Sbjct: 288 LLGYRVSIKFEEGLRKTIDWYKK 310
>gi|229088322|ref|ZP_04220172.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
Rock3-44]
gi|228694998|gb|EEL48124.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
Rock3-44]
Length = 326
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + ++ SG+K+ + +S+ IY DE V + PD H KY++E
Sbjct: 86 NVLGTKHIIEGSQKSGIKRLIHVSTPSIYFYYDERQDVVENAKLPDTFVNHYAKTKYMAE 145
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
++ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 146 QATDQAFNHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTEDVLVDITYVE 203
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ + + L
Sbjct: 204 NVVDALLLCMHSPKHTLGQKYNITNGERINL 234
>gi|347532736|ref|YP_004839499.1| NAD-dependent epimerase/dehydratase [Roseburia hominis A2-183]
gi|345502884|gb|AEN97567.1| NAD-dependent epimerase/dehydratase [Roseburia hominis A2-183]
Length = 307
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 33/213 (15%)
Query: 140 DPAEVGNVVGGVTFDVVLDNNGK-NLDA--VRPVAD--------WAKSSGVKQF------ 182
+ AE+ + GV DV+L G N+ A V P+AD + +K F
Sbjct: 56 ESAEMAAIFTGVQPDVILHCAGSANVGASVVNPMADLDGNLHSLYQLLLALKSFEKRPEI 115
Query: 183 LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI-------- 234
+F+SSAG+Y + P E DV P + + + K++ E + + Y I
Sbjct: 116 IFLSSAGVYGNPRQLPVRESDVAAPMSPY-GLHKHMGEELCEYYNRIHGYHIRSIRIFSA 174
Query: 235 -GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM--LTLAVENPEAASSN 291
G+G K + + + + G+G + + HV D+ L L+ + PEA
Sbjct: 175 YGNGLRKQLLWDIYQKYQNTGRIELFGTGEETRDFIHVSDIMRAIDLILSYDGPEA---- 230
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
+ N+ + V++ +A++ A+ G P IV ++
Sbjct: 231 VINVANGEEVSIRELAEIYAEKLGAPQNIVSFN 263
>gi|196038034|ref|ZP_03105344.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus NVH0597-99]
gi|196031304|gb|EDX69901.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus NVH0597-99]
Length = 328
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + ++ G+K+ + +S+ IY DE +V + PD H KY++E
Sbjct: 88 NVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAE 147
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G +I +V
Sbjct: 148 QAIDQAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGIENVLVDITYVE 205
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D + L
Sbjct: 206 NVVDALLLCMHSPKHTLGQKYNITNDERINL 236
>gi|325569769|ref|ZP_08145793.1| hypothetical protein HMPREF9087_2082 [Enterococcus casseliflavus
ATCC 12755]
gi|325157074|gb|EGC69240.1| hypothetical protein HMPREF9087_2082 [Enterococcus casseliflavus
ATCC 12755]
Length = 298
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 38/210 (18%)
Query: 67 VKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG---DENSDKMKKPPF 123
+K S KKVL++ GG G YL + L+ G +VTI T G D D++ + F
Sbjct: 1 MKRSVLMSKKVLVL----GGTRFFGKYLVQSLVDQGCDVTIATRGKTTDSFGDQVNRLVF 56
Query: 124 NRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL 183
+R D + + T+DV+ DN + + + + K+++
Sbjct: 57 DR-------------TDEESIKTTLTQETYDVIYDNIAYTSNDIEIL---LRHVTPKRYI 100
Query: 184 FISSAGIY-------KPADEPPHVEG------DVVKPDAGHVQVEKYISENFSNWAS--F 228
SS Y K D P E + V G VE+ +++N+S S
Sbjct: 101 VTSSMSAYHELHFDLKETDFDPAKEAVKIVYSEEVNYAEGKRTVEEILTQNYSQIPSVFV 160
Query: 229 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPI 258
R Y+IG+ + ++ D +++++P+ +
Sbjct: 161 RFPYVIGADDYTKRFAFYIDHLIKQKPMAV 190
>gi|312139420|ref|YP_004006756.1| UDP-glucose 4-epimerase [Rhodococcus equi 103S]
gi|311888759|emb|CBH48071.1| UDP-glucose 4-epimerase [Rhodococcus equi 103S]
Length = 331
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 131/346 (37%), Gaps = 66/346 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G LL GHEV + V D ++ P AG + + GD A
Sbjct: 6 TGGAGYVGSVCTTVLLERGHEVVV--VDDLSTGNADAVP---------AGAEFIEGDIAA 54
Query: 144 V-GNVVGGVT----FDVVLDNNGKNL---DAVRPVADWA-------------KSSGVKQF 182
V G+V+G FD VL ++L RP W + SG +
Sbjct: 55 VAGSVLGSGNSTPRFDGVLHFAAQSLVGESVERPEQYWQGNVVTTLALLEAMRLSGTPRL 114
Query: 183 LFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISE--NFSNWASFRPQYM--- 233
+F S+A Y + P E +P A + ++ I+ N + A+ +Y
Sbjct: 115 VFSSTAATYGEPERTPITEDAPTRPTNPYGATKLAIDHAITSYANAHSLAATSLRYFNVA 174
Query: 234 ---IGSGNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLT 279
G+G N+ E +++ + + + G+ G + HV DL+
Sbjct: 175 GAYKGAGENRVVETHLIPLVLQVALGQREKISVFGTDWPTKDGTAVRDYIHVLDLADAHL 234
Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 339
LA+E+ I+NL S T+ + C + GLP+ P+ AG A
Sbjct: 235 LALESSVPGHHRIYNLGSGAGFTVREVISACERVTGLPIA-AEDAPRRAGDPAV------ 287
Query: 340 NMHFYAEPRAAKDILGWR-STTNLPEDLKERFEEYVKIGRDKKAMQ 384
A A D LGWR + T+L E + + + +G A +
Sbjct: 288 ---LIASSDRAVDELGWRPAHTDLDEIVSDAWTYLQALGDRSHAAR 330
>gi|403378522|ref|ZP_10920579.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. JC66]
Length = 345
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 20/200 (10%)
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG-VKQFLFISSAGIYK-PADEP 197
D V ++G + FDVV D + V D+ +G KQ++FISSA Y+ P +
Sbjct: 52 DEQRVAELIGDLHFDVVADFIAFTPEQVE--RDYRLFAGKTKQYMFISSASAYQTPLSDY 109
Query: 198 PHVEGDVV-----KPDAGHVQVEKYISENFSN----WASFRPQYM-----IGSGNNKDCE 243
EG + + + E Y++ + RP + I G +
Sbjct: 110 RITEGTPLSNPYWEYSRNKIACEDYLTRQYRENGFPVTIVRPSHTYSERSIPLGVHGTKG 169
Query: 244 EW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
W R++ +PV I G G + H RD ++ + N A + + SD +T
Sbjct: 170 SWQVAKRMLEGKPVLIHGDGTSLWTMTHSRDFANGFIGLMGNLHAYGEAV-QITSDETLT 228
Query: 303 LDGMAKLCAQAAGLPVEIVH 322
+ + A A G+P++ VH
Sbjct: 229 WNQIYSAIADALGVPLQAVH 248
>gi|359445520|ref|ZP_09235252.1| UDP-glucose 4-epimerase [Pseudoalteromonas sp. BSi20439]
gi|358040643|dbj|GAA71501.1| UDP-glucose 4-epimerase [Pseudoalteromonas sp. BSi20439]
Length = 308
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 90/226 (39%), Gaps = 24/226 (10%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH--------VQV 214
N DA +A+ A SG K+F+FISS G+ + P DV P + +++
Sbjct: 90 NTDATITLAEQAIRSGAKRFIFISSIGVNGSNNTQPFTFDDVPNPAEAYAVSKHHAEIKL 149
Query: 215 EKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV----RKRPVPIPGSGMQFTNIAH 270
++ + RP + G G + F ++V + P+P+ Q + +A
Sbjct: 150 QELAKKTGLEVVIIRPPLVYGVGAPGN-----FGKLVNLAEKNLPLPLGSINNQRSFVA- 203
Query: 271 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-----LPVEIVHYDP 325
V +L ++ V +P AA+ F + D +V+ + K AAG LP+ +
Sbjct: 204 VDNLIDLIITCVGHPNAANKT-FLVSDDESVSTSNLLKQLTLAAGKKPLLLPMPVAFLRF 262
Query: 326 KAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 371
A + K + K L W+ L E ++ FE
Sbjct: 263 IAGCVGKKDHIDKLANSLTIDIEFTKKTLNWKPPITLDEGIRRCFE 308
>gi|357392864|ref|YP_004907705.1| putative NAD-dependent epimerase/dehydratase [Kitasatospora setae
KM-6054]
gi|311899341|dbj|BAJ31749.1| putative NAD-dependent epimerase/dehydratase [Kitasatospora setae
KM-6054]
Length = 325
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 37/211 (17%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-----KTVWG 139
GG +G L + L +GH VT+ FN +SA G +TV G
Sbjct: 3 GGTRFVGRALVEAALAAGHRVTL------------------FNRGLSAPGLFPGVETVLG 44
Query: 140 DPAEVGNVVGGVTFDVVLDNNGKNLDAV-RPVADWAKSSGVKQFLFISSAGIYKPADEPP 198
D + + G ++D V+D G +AV R VA A S V +++F+SS +
Sbjct: 45 DRTADLSALAGRSWDAVVDVAGYEPEAVRRSVA--ALSGRVGRYVFVSSLSVLADQATVQ 102
Query: 199 HVEGDVVKPD----------AGHVQVEKYISENFSNWAS-FRPQYMIGSGNNKDCEEWFF 247
+G+++ D A + E+ + + F AS RP ++G ++ D ++
Sbjct: 103 DEDGELLDLDRELPPHQLYGARKARCERIVLDAFGERASVVRPGLIVGPHDSTDRFPYWP 162
Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 278
R R V +PG VRDL++ +
Sbjct: 163 RRFRRGGRVLLPGDPADPAQFIDVRDLAAWI 193
>gi|421484565|ref|ZP_15932133.1| GDP-L-fucose synthase [Achromobacter piechaudii HLE]
gi|400197060|gb|EJO30028.1| GDP-L-fucose synthase [Achromobacter piechaudii HLE]
Length = 320
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 122/320 (38%), Gaps = 51/320 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G + +EL G+ ++T D + +RF V+ A+
Sbjct: 11 AGHRGMVGAAITRELQRRGYP-HVLTRTRAELDLENQNQVHRFFSTTPV--DVVYLAAAK 67
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-----KPADEPP 198
VG ++ V D KNL V A ++GV++ LF+ S+ IY +P E
Sbjct: 68 VGGILANQNHPV--DFLYKNLMIQCNVIRAAYAAGVRKLLFLGSSCIYPREAAQPLREDA 125
Query: 199 HVEGDV--------VKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDR 249
+ G + + AG E Y E + + P + G +N D
Sbjct: 126 LLTGPLESTNEPYAIAKIAGLKLCEAYQREYGARFICAMPTNLYGPHDNYDLHSSHVLPA 185
Query: 250 IVRK---------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
++RK V I G+G +V DL+ +E+P+A I+N+ + +
Sbjct: 186 LIRKFHEGRESGQESVTIWGTGTPLREFLYVDDLAQACVTLMEHPDA--EGIYNIGAGKD 243
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD-----ILG 355
+++ +A L A+ G IV+ K G PR D LG
Sbjct: 244 ISIADLAALVARVVGYHGRIVYDTTKPDGT----------------PRKLMDSSRVQALG 287
Query: 356 WRSTTNLPEDLKERFEEYVK 375
WR +L + + + +++
Sbjct: 288 WRPDVSLVDGITLAYGHFLR 307
>gi|423675041|ref|ZP_17649980.1| hypothetical protein IKS_02584 [Bacillus cereus VDM062]
gi|401308976|gb|EJS14350.1| hypothetical protein IKS_02584 [Bacillus cereus VDM062]
Length = 328
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + + G+K+ + +S+ IY DE +V + PD H K+++E
Sbjct: 88 NVLGTKHIIEGCQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKHMAE 147
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 148 QAIDQAFMHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 205
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D V L
Sbjct: 206 NVVDALLLCMHSPKHTLGQKYNITNDERVNL 236
>gi|333923614|ref|YP_004497194.1| dTDP-glucose 4,6-dehydratase [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333749175|gb|AEF94282.1| dTDP-glucose 4,6-dehydratase [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 316
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 228 FRPQYMIGSGNNKDCEEWFFDRIVRK----RPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
RP + G G N DC F +++R R + G G Q+ + +V D+ L A
Sbjct: 171 LRPTLVYGPGQNDDC---FMSQLIRSLLSGRHFSMTG-GEQYRDFIYVSDVVEALWHAAN 226
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 343
NP A IFN+ S ++ L +A++ A G P +++ K + K F +
Sbjct: 227 NPRALGE-IFNIGSGKSYPLREVARMIADFIGQPDDLL----KIGALPYNKEEQF---AY 278
Query: 344 YAEPRAAKDILGWRSTTNLPEDLK 367
+ AK +L W+ L E +K
Sbjct: 279 CVDINRAKQVLNWQPKIMLREGIK 302
>gi|76801846|ref|YP_326854.1| NADH dehydrogenase 32K chain-like protein [Natronomonas pharaonis
DSM 2160]
gi|76557711|emb|CAI49294.1| arNOG06768 family NADH-binding domain protein [Natronomonas
pharaonis DSM 2160]
Length = 305
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 92/255 (36%), Gaps = 45/255 (17%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIM---------------TVGDENSDKMKKPPFNRFNEI 129
GG IG +L EL GHEVT M T GD + +P F + +
Sbjct: 7 GGTGFIGTHLCAELHDRGHEVTAMSRSPDDGGVPEGVEATAGDVTTYDSIEPAFEGVDAV 66
Query: 130 VSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
V+ + P+ GG + +G V A+ GV + + +S+ G
Sbjct: 67 VNLVALSPLFRPS------GGDEMHYRIHRDG-----TENVVAAAEKHGVDRLVQLSALG 115
Query: 190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
P E ++ Q E + + W RP + G G F
Sbjct: 116 A-DPDGETAYIR--------AKGQGEDIVRSSSLEWVILRPSVVFGDGGE------FIPY 160
Query: 250 IVRKRP---VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
+ P P+PG G + DL+ M+ A E A I+ L A+TL +
Sbjct: 161 TKQLAPAYLTPLPGGGKTRFQPIWIGDLAPMIADAATEDEHA-GEIYELGGPEALTLASI 219
Query: 307 AKLCAQAAGLPVEIV 321
AKL A G PV ++
Sbjct: 220 AKLAHAADGRPVNVL 234
>gi|424914346|ref|ZP_18337710.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392850522|gb|EJB03043.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 317
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 108/262 (41%), Gaps = 39/262 (14%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
+VL++ GH +G YL L+ +GH+V ++ G P+ S +
Sbjct: 2 RVLVIGAT--GH--VGTYLVPRLVEAGHDVVTISRG-------AAKPYTENRAWASVDQR 50
Query: 136 TVWGDPAEV------GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
+ D AE+ G V V D+V+D L++ + A S V FL +
Sbjct: 51 RM--DRAEMERTGDFGPAVRDVKADIVIDMICFTLESAEQLVT-ALSGHVGHFLHTGTIW 107
Query: 190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISENF-SNWASFR--------PQYMIGSG--- 237
+ P +E + K G ++K E + A R P +++G G
Sbjct: 108 THGYPSTVPTLE-EAPKSPFGDYGIQKAAIETYLLQQARLRGFPATVIHPGHIVGRGWAP 166
Query: 238 ----NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
N + + F + R + +P G++ + H D+++M A+ N A++ F
Sbjct: 167 LNPAGNFNLQ--VFSTLARGDALALPNFGLETVHHVHADDVAAMFMDAIANWNASTGESF 224
Query: 294 NLVSDRAVTLDGMAKLCAQAAG 315
+ VS++A+TL G A+ + G
Sbjct: 225 HAVSEQALTLRGYAEAMSHWFG 246
>gi|229092042|ref|ZP_04223228.1| NAD-dependent epimerase/dehydratase [Bacillus cereus Rock3-42]
gi|228691307|gb|EEL45069.1| NAD-dependent epimerase/dehydratase [Bacillus cereus Rock3-42]
Length = 359
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 115/274 (41%), Gaps = 49/274 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G K F +++ G +
Sbjct: 21 KILIL----GGTRFLGRAFVEEALNRGHEVTLFNRG------TNKEIFPEVKQLI--GDR 68
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + N +DVV+D G + +R V + K + ++ ++FISS +YK
Sbjct: 69 N--GDVSSLEN----RKWDVVVDTCGFSPHHIRNVGEVLKDN-IEHYIFISSLSVYKDWI 121
Query: 196 EPPHVEGD-VVKPDAGHVQVEKYISENFSNWASF----------------------RPQY 232
P H++ D +++P+ Q++ + S + + R
Sbjct: 122 -PHHIKEDYILQPEPTEEQIKAVENGEISPYEHYGALKVLCEKEAEKYWPGRVLHVRAGL 180
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM-LTLAVENPEAASSN 291
+ G + D ++ R+ + V +PG + + ++D++ L +A +N +
Sbjct: 181 LSGMFDYTDRLAYWIQRVAKGGKVLVPGRKTRPVQLVDIKDVAYFGLNMAEKN----KAG 236
Query: 292 IFNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYD 324
IFN+ + +T++ + C + E V D
Sbjct: 237 IFNVTGPNDELTMEELLNTCKKVTNSDAEFVWVD 270
>gi|190894633|ref|YP_001984926.1| putative UDP-glucose 4-epimerase [Rhizobium etli CIAT 652]
gi|190700294|gb|ACE94376.1| probable UDP-glucose 4-epimerase protein [Rhizobium etli CIAT 652]
Length = 367
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 9/121 (7%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F R+ +P I G Q + HVRD++ LA+E P AAS ++ N+ S +A ++
Sbjct: 226 FGSRLANGQPPMIFEDGKQRRDFVHVRDVARAFRLALEKP-AASGHVINIGSGQAYSIAD 284
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
+A L A A G+P KA D + F A+ A+++LG+ +L
Sbjct: 285 VATLLADAMGVPEIAPDIMNKARSGDIRNCF--------ADISKARELLGFEPRYHLENS 336
Query: 366 L 366
L
Sbjct: 337 L 337
>gi|440740605|ref|ZP_20920085.1| putative lipopolysaccharide biosynthesis-related
epimerase/dehydratase [Pseudomonas fluorescens
BRIP34879]
gi|447919641|ref|YP_007400209.1| putative lipopolysaccharide biosynthesis-related
epimerase/dehydratase [Pseudomonas poae RE*1-1-14]
gi|440376143|gb|ELQ12825.1| putative lipopolysaccharide biosynthesis-related
epimerase/dehydratase [Pseudomonas fluorescens
BRIP34879]
gi|445203504|gb|AGE28713.1| putative lipopolysaccharide biosynthesis-related
epimerase/dehydratase [Pseudomonas poae RE*1-1-14]
Length = 309
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 109/274 (39%), Gaps = 35/274 (12%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIM---TVGDENSDKMKKPPFNRFNEIVS--------A 132
+GG IG +L LL G+ V ++ + G ++ + P V+ A
Sbjct: 9 TGGAGFIGSHLVDALLAKGYAVRVLDNLSTGKRSNLPLDNPRLQLLEGDVADAEQVAQAA 68
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
G + A V +V V D + + N V + + +GVK+ +F SSA +Y
Sbjct: 69 VGVSAVVHLAAVASVQASV--DDPVGTHQSNFVGTLNVCEAMRKAGVKRVVFASSAAVYG 126
Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD-- 241
E ++ + K +K E++ ++ +R Q+ + G +D
Sbjct: 127 NNGEGASIDEETTKAPLTPYASDKLAGEHYFDF--YRRQHGLEPVIFRFFNVFGPRQDPS 184
Query: 242 -----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
F +R P+ + G G Q + +V DL +L A+E P+A I N+
Sbjct: 185 SPYSGVISIFSERAQTGAPIAVFGDGEQTRDFMYVEDLVDVLVQAIEAPQAPLGAI-NVG 243
Query: 297 SDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+R TL + + Q G LP V Y P +G
Sbjct: 244 WNRTTTLKQVLQALEQVVGTLPT--VTYGPARSG 275
>gi|337290935|ref|YP_004629956.1| UDP-glucose 4-epimerase [Corynebacterium ulcerans BR-AD22]
gi|334699241|gb|AEG84037.1| UDP-glucose 4-epimerase [Corynebacterium ulcerans BR-AD22]
Length = 327
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 129/337 (38%), Gaps = 66/337 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G A LL GHEVTI+ D NR E V AG V GD +
Sbjct: 6 TGGAGYVGSVCAAVLLEQGHEVTIV-------DNFSTG--NR--EAVPAGASLVEGDIRD 54
Query: 144 VGN-VVGGVTFDVVLDNNGKNL---DAVRPVADWA-------------KSSGVKQFLFIS 186
N ++ ++D VL ++L +P W +++ V +F S
Sbjct: 55 KANEILASDSYDAVLHFAARSLVGESVEKPSEYWQHNFVTTLALLDAMRTNNVTNLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIGS-- 236
+A Y P E +P + + I +++A S R + G+
Sbjct: 115 TAATYGEPASVPITEDFPTQPTNPYGATKLAIDHAITSYAHAYGLSATSLRYFNVAGAYG 174
Query: 237 --GNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVE 283
G N++ E I++ + + + G G + H+RDL+ LA+E
Sbjct: 175 DIGENREVETHLIPLILQVALGHRDKILMFGDDWPTEDGTAVRDYIHIRDLADAHVLAME 234
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG--LPVEIVHYDPKAAGIDAKKAFPFRNM 341
+ + IFNL S ++ + + C G +P E+ P+ AG A
Sbjct: 235 SNQPGVHRIFNLGSGEGFSVKQVIEACRTVTGHPIPAEVA---PRRAGDPAV-------- 283
Query: 342 HFYAEPRAAKDILGWRST-TNLPEDLKERFEEYVKIG 377
A A+ LGW T T+L +++ + K+G
Sbjct: 284 -LIASSAKAQSELGWHPTRTDLSTIVEDAWSFTSKLG 319
>gi|1161517|emb|CAA89986.1| UDP-galactose 4-epimease [Corynebacterium glutamicum]
Length = 329
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 118/324 (36%), Gaps = 83/324 (25%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTI-----------------MTVGDENSDKMKKPPFNRF 126
+GG +G A LL GH+VTI + GD N + F
Sbjct: 6 TGGAGYVGSVRAAVLLEHGHDVTIIDNFSTGNREAVPADARLIEGDVNDVVEEVLLEGGF 65
Query: 127 NEIVSAGGKTVWGDPAEV------GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK 180
+V +++ G+ E NVV +T LDA+R + GV
Sbjct: 66 EGVVHFAARSLVGESVEKPNEYWHDNVVTALTL----------LDAMR-------AHGVN 108
Query: 181 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQY 232
+F S+A Y D P E +P + + I +++A S R
Sbjct: 109 NLVFSSTAATYGEPDVVPITEDMPTQPTNAYGATKLSIDYAITSYAAAFGLAATSLRYFN 168
Query: 233 MIGS----GNNKDCEEWFFDRIV------RKR--------PVPIPGSGMQFTNIAHVRDL 274
+ G+ G N++ E ++ R++ P P G + H+ DL
Sbjct: 169 VAGAYGNIGENREVETHLIPLVLQVATGHREKIFMFGDDWPTP---DGTAVRDYIHILDL 225
Query: 275 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG--LPVEIVHYDPKAAGIDA 332
+ LA+E+ EA IFNL S ++ + ++C + G +P E+ P+ AG A
Sbjct: 226 AKAHVLALESNEAGKHRIFNLGSGDGYSVKQVVEMCREVTGHPIPAEVA---PRRAGDPA 282
Query: 333 KKAFPFRNMHFYAEPRAAKDILGW 356
A AK LGW
Sbjct: 283 T---------LIASSEKAKQELGW 297
>gi|335040660|ref|ZP_08533784.1| NAD-dependent epimerase/dehydratase [Caldalkalibacillus thermarum
TA2.A1]
gi|334179394|gb|EGL82035.1| NAD-dependent epimerase/dehydratase [Caldalkalibacillus thermarum
TA2.A1]
Length = 307
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 128/330 (38%), Gaps = 60/330 (18%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP----FNRFNEIV 130
K VL+ +GG +G ++ L G + V + V + +S ++ P F F +IV
Sbjct: 2 KTVLV----TGGAGFVGSHVVNHLQGKNYNVVV--VDNLSSGQIDNIPDGTAFYPF-DIV 54
Query: 131 SAGGKTVWGD--PAEVGNVVGGVTFDVVLDNNGK----NLDAVRPVADWAKSSGVKQFLF 184
S+ K V+ P V ++ V ++N K N+ + DW K V+ +F
Sbjct: 55 SSNLKVVFEKHRPEVVIHLAAQSHVGVSMENRKKDAQVNVMGTINLLDWCKVYKVQHVIF 114
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGH----------VQVEKYISENFS----NWASFRP 230
S+A +Y ++ P +K +A H + EKYI N+ R
Sbjct: 115 SSTAAVYGDQEQLP------IKEEAPHNPLSPYALSKLTAEKYIQLYAGLYGFNYTVLRF 168
Query: 231 QYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 286
+ G E F +R++ + + G G Q + V+D++ + ++N
Sbjct: 169 SNVYGPRQANAAESGVITKFAERLLTNQSPIVYGDGTQTRDFIFVKDVADGIVSVLQNE- 227
Query: 287 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAE 346
S IFNL + +++ + + G +E + PFR Y
Sbjct: 228 --SGGIFNLSTASETSINEVLSTMYELIGRRIEPTY-------------LPFRKGDIYRS 272
Query: 347 PRA---AKDILGWRSTTNLPEDLKERFEEY 373
+ A LGW T+L +KE + +
Sbjct: 273 CLSNSKAVQALGWTPKTSLHAGIKETLQYF 302
>gi|116251770|ref|YP_767608.1| hypothetical protein RL2007 [Rhizobium leguminosarum bv. viciae
3841]
gi|424870251|ref|ZP_18293913.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|115256418|emb|CAK07500.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
gi|393165952|gb|EJC65999.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 317
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 47/259 (18%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
+VL++ GH +G YL L+ +GH+V ++ G P+ + + +
Sbjct: 2 RVLVIGAT--GH--VGTYLVPRLVDAGHDVVTISRGTAK-------PYTANHAWAAVDQR 50
Query: 136 TV----WGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + G V GV D+V+D +L++ + A S V FL + +
Sbjct: 51 QMDRAAMEQTGDFGPAVRGVKADIVIDMICFSLESAEHLVT-ALSGHVGHFLHTGTIWTH 109
Query: 192 KPADEPPHVE-------GDVVKPDAGHVQVEKYISENFSNWASFR--------PQYMIGS 236
+ P +E GD A +E Y+ + A R P +++G
Sbjct: 110 GHSTVVPTLEETPKFPFGDYGTQKAA---IETYLLQQ----ARLRGFPATIIHPGHIVGP 162
Query: 237 G-------NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
G N + + F + R + +P G++ + H D+++M A+ N A++
Sbjct: 163 GWTPLNPAGNFNLQ--VFSTLARGETLALPHFGLETVHHVHADDVAAMFMDAIANWNAST 220
Query: 290 SNIFNLVSDRAVTLDGMAK 308
F+ VS++A+TL G A+
Sbjct: 221 GESFHAVSEQALTLRGYAE 239
>gi|423668832|ref|ZP_17643861.1| hypothetical protein IKO_02529 [Bacillus cereus VDM034]
gi|401300280|gb|EJS05873.1| hypothetical protein IKO_02529 [Bacillus cereus VDM034]
Length = 328
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + + G+K+ + +S+ IY DE +V + PD H K+++E
Sbjct: 88 NVLGTKHIIEGCQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKHMAE 147
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 148 QAIDQAFMHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 205
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D V L
Sbjct: 206 NVVDALLLCMHSPKHTLGQKYNITNDERVNL 236
>gi|421872943|ref|ZP_16304559.1| NAD dependent epimerase/dehydratase family protein [Brevibacillus
laterosporus GI-9]
gi|372457889|emb|CCF14108.1| NAD dependent epimerase/dehydratase family protein [Brevibacillus
laterosporus GI-9]
Length = 318
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
FF ++ K P+ I G G Q N ++V D+ LA E +A ++N+ +R ++L
Sbjct: 196 FFRAMMHKEPIQIYGDGSQSRNFSYVHDVVEANLLASEFGQAG--KVYNIGGEREISL-- 251
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 365
+A L +I+ +P A+K R A+ A +G+R T+L +
Sbjct: 252 -----LEAVSLMAKIMQVEPDITFTIAEKGDSRRTC---ADISLAAQQIGYRPHTSLEQG 303
Query: 366 LKERFEEYVKI 376
L ++F++ K+
Sbjct: 304 LYQQFQDIKKL 314
>gi|404329724|ref|ZP_10970172.1| hypothetical protein SvinD2_06476 [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 311
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 170 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYIS--ENFS 223
V A +G + +F SSA +Y + P P++ + + VE Y+ F
Sbjct: 101 VIQAAHQAGASRVVFASSAAVYGEPQDLPVTPEQPAAPESPYGLAKLTVESYLKMFHKFY 160
Query: 224 NWASFRPQYMIGSGNNKDCE------EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 277
+ + ++ G +D E F DRI + P I G G Q + VRD++S
Sbjct: 161 HLSYSILRFSNVYGPRQDAEGEGGVVSIFADRIRKDTPPMIFGDGNQTRDFIFVRDVASA 220
Query: 278 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP 337
+ LA+ E A S N+ S ++++ + + + +G P++ Y P+ G
Sbjct: 221 VVLAL---EPAESLCVNVSSGAPLSVNQLFSMMKKVSGSPIQ-PFYGPERDG-------D 269
Query: 338 FRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 368
R+ E AAK +L W+ T+L + L E
Sbjct: 270 IRDSVLSNE--AAKTLLHWKPVTSLYDGLGE 298
>gi|434406084|ref|YP_007148969.1| nucleoside-diphosphate-sugar epimerase [Cylindrospermum stagnale
PCC 7417]
gi|428260339|gb|AFZ26289.1| nucleoside-diphosphate-sugar epimerase [Cylindrospermum stagnale
PCC 7417]
Length = 318
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 21/220 (9%)
Query: 162 KNLDAVRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEK 216
+N++A + + + AK + +K+ +F S++ +Y A+ P E KP + + + E+
Sbjct: 101 RNINATQVLLEAAKDAKHLKRLVFASTSSVYGDAETLPTYEQICPKPISPYGITKLAAER 160
Query: 217 YISENFSNWA----SFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHV 271
+ N+ + R + G D FF +++ + I G G+Q + +
Sbjct: 161 LCGLYYKNFGVPFVALRYFTVYGPRQRPDMAFHKFFKSVLQDEAILIYGDGLQTRDFTFI 220
Query: 272 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID 331
+D + A PEA IFN+ V L + + G P+ H + KA G D
Sbjct: 221 KDAVAANLAAATVPEAV-GEIFNIGGGSRVVLTEVLNTMEEIIGKPITRNHIE-KAMG-D 277
Query: 332 AKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 371
A+ H A+ A+ ILG++ +L E L + ++
Sbjct: 278 AR--------HTAADVSKAQKILGYKPQVSLKEGLTQEWQ 309
>gi|334342734|ref|YP_004555338.1| hypothetical protein [Sphingobium chlorophenolicum L-1]
gi|334103409|gb|AEG50832.1| hypothetical protein Sphch_3221 [Sphingobium chlorophenolicum L-1]
Length = 311
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 8/142 (5%)
Query: 229 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
RP + G+G W F+ + R G G+ + HV DL+ + LA+E +A
Sbjct: 156 RPPMIWGNGGGNGQVAWMFEAVERMGAACYLGMGLNLYSGVHVDDLADVYALALERGQAG 215
Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPR 348
+ +++ VS V +A+ Q G P + YD + + ++ P+R + R
Sbjct: 216 A--LYHAVSGE-VNWRTIAEAVGQVMGCPARSISYD-EMCKLWGEQDAPYR-FGVSSRSR 270
Query: 349 AAK--DILGWRSTT-NLPEDLK 367
A K + LGW T +L +D++
Sbjct: 271 AVKTREHLGWAPTRPDLIDDIR 292
>gi|357411246|ref|YP_004922982.1| NAD-dependent epimerase/dehydratase [Streptomyces flavogriseus ATCC
33331]
gi|320008615|gb|ADW03465.1| NAD-dependent epimerase/dehydratase [Streptomyces flavogriseus ATCC
33331]
Length = 330
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 108/279 (38%), Gaps = 51/279 (18%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--PA 142
GG +G + L G EVT+ F+R + AG +T+ GD
Sbjct: 3 GGTEFVGRAVTDAALARGWEVTV---------------FHRGHHAAPAGARTLTGDRTTG 47
Query: 143 EVG-NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPA-----D 195
E G + T+D+V+D AVR A S F ++SS +Y +PA +
Sbjct: 48 EAGLRALADGTWDLVVDTWSGAPSAVRDAAR-LLSGRAGHFGYVSSRSVYAQPAPAGLAE 106
Query: 196 EPPHVEGDVVKPDAGHVQVEKYISENFSNWASF----------RPQYMIGSGNNKDCEEW 245
+ P V G PD G V +++ A+ R ++G G N W
Sbjct: 107 DGPLVAG--ASPDDG-PDVSYALAKRGGELAALDAFGDRALLARAGLILGPGENIGRLPW 163
Query: 246 FFDRIVRKRPVPIPG---SGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA-V 301
+ R R V PG +G+Q+ + RDL+ L ++ S +N VS
Sbjct: 164 WLGRAARGGAVVAPGPPDAGIQYID---ARDLADWL---LDAAAGGLSGAYNTVSHPGHA 217
Query: 302 TLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFP 337
T+ + C Q G + DP+ AAG++ P
Sbjct: 218 TMGELLDACVQVTGSRARLRWTDPETLLAAGVEPWTDLP 256
>gi|423316030|ref|ZP_17293935.1| hypothetical protein HMPREF9699_00506 [Bergeyella zoohelcum ATCC
43767]
gi|405585035|gb|EKB58875.1| hypothetical protein HMPREF9699_00506 [Bergeyella zoohelcum ATCC
43767]
Length = 331
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 139/332 (41%), Gaps = 45/332 (13%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT-------------VGDENSDKMK 119
+ KK+L+ +GG IG L+++LL G VT++ + +EN ++
Sbjct: 7 QNKKILV----TGGAGFIGSNLSEKLLELGAMVTVLDNFATGHRHNIEAFLSNENFTLIE 62
Query: 120 KPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGV 179
+ + G+ A +G+V + + + +N N+ + A+ +GV
Sbjct: 63 GDIRDLETCRKACEGQDFVLHQAALGSVPRSINYPIT--SNDVNVGGFLNMLVAARDTGV 120
Query: 180 KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN-------WASFRPQY 232
K+ ++ +S+ Y + P VE + KP + + + KY++E +++ + + +Y
Sbjct: 121 KRLVYAASSSTYGDSKSLPKVEDVIGKPLSPYA-ITKYVNELYADVFKRTYDFDTIGLRY 179
Query: 233 MIGSGNNKDCEEW-------FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA-VEN 284
G +D + F +++ + I G G + ++ ++ M LA +
Sbjct: 180 FNVFGRRQDPKGAYAAVIPKFVIQLMNHQSPTINGDGTYSRDFTYIDNVIQMNLLAMISE 239
Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM--- 341
E A + ++N T+ MA+L L + YDPK A ++ P R
Sbjct: 240 NENAVNQVYNTAVGDRTTIKDMAEL------LKKYLSEYDPKIAEVEILHG-PNRQGDVP 292
Query: 342 HFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 373
H A A+ LG++ T E LKE + Y
Sbjct: 293 HSLASIEKAQKNLGYQPTHKFAEGLKEAVDWY 324
>gi|423402075|ref|ZP_17379248.1| hypothetical protein ICW_02473 [Bacillus cereus BAG2X1-2]
gi|423477234|ref|ZP_17453949.1| hypothetical protein IEO_02692 [Bacillus cereus BAG6X1-1]
gi|401651974|gb|EJS69534.1| hypothetical protein ICW_02473 [Bacillus cereus BAG2X1-2]
gi|402430861|gb|EJV62934.1| hypothetical protein IEO_02692 [Bacillus cereus BAG6X1-1]
Length = 328
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE 220
N+ + + + + G+K+ + +S+ IY DE +V + PD H K+++E
Sbjct: 88 NVLGTKHIIEGCQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKHMAE 147
Query: 221 NFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 272
+ A + RP+ + G G+N ++ K +P G+ +I +V
Sbjct: 148 QAIDQAFMHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVE 205
Query: 273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
++ L L + +P+ +N+ +D V L
Sbjct: 206 NVVDALLLCMHSPKHTLGQKYNITNDERVNL 236
>gi|326202035|ref|ZP_08191905.1| NAD-dependent epimerase/dehydratase [Clostridium papyrosolvens DSM
2782]
gi|325987830|gb|EGD48656.1| NAD-dependent epimerase/dehydratase [Clostridium papyrosolvens DSM
2782]
Length = 349
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 134/338 (39%), Gaps = 55/338 (16%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
KKKVLI +G + V+G L K L +G E + + D N + + F + +
Sbjct: 2 KKKVLI----TGNNGVLGRNLVKYLHENGRENYELVLFDINQNSSEFSNFQVYKGDIRKK 57
Query: 134 G--KTVWGDPAEVGNVVGG-------VTFDVVLDNNGKNLDAVRPVADWAKSSG-VKQFL 183
+ V GD V + G +D++++ L+ A ++G V++F+
Sbjct: 58 EDVEKVIGDIDIVVHCAGASPSYEEAQIYDIIINGTSNLLEC-------AFTTGKVERFV 110
Query: 184 FISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSNWAS-------FRPQY 232
+ISS +Y ++ P E D VKP + ++ E+ +W S RP+
Sbjct: 111 YISSTSVYGVPEKAPIYETDEVKPYDPYNRSKIETERLC----DHWRSKGHCVSVLRPRS 166
Query: 233 MIGS---GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
+G G EW R P+ G G + V DL + LA+ +
Sbjct: 167 FLGPERLGTFGILYEW----ASEGRNFPMLGPGKNKYQLLDVEDLCQAIYLAISVDANNA 222
Query: 290 SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG-----IDAKKAFPFR----- 339
+++FN+ + T+ + AAG +I + K ++ K PF
Sbjct: 223 NDLFNIGAKEFSTIKDDYQSVLDAAGFNKKIKCFPAKPMFFILNILEKLKLSPFYKRLYL 282
Query: 340 --NMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 375
N ++Y A+ LG++ + + L + Y++
Sbjct: 283 KLNRNYYVSIEKAEKKLGYKPKHSNKDSLVRNYRWYLE 320
>gi|229097565|ref|ZP_04228524.1| NAD-dependent epimerase/dehydratase [Bacillus cereus Rock3-29]
gi|423442188|ref|ZP_17419094.1| hypothetical protein IEA_02518 [Bacillus cereus BAG4X2-1]
gi|423465255|ref|ZP_17442023.1| hypothetical protein IEK_02442 [Bacillus cereus BAG6O-1]
gi|423534601|ref|ZP_17511019.1| hypothetical protein IGI_02433 [Bacillus cereus HuB2-9]
gi|423540123|ref|ZP_17516514.1| hypothetical protein IGK_02215 [Bacillus cereus HuB4-10]
gi|228685835|gb|EEL39754.1| NAD-dependent epimerase/dehydratase [Bacillus cereus Rock3-29]
gi|401173658|gb|EJQ80870.1| hypothetical protein IGK_02215 [Bacillus cereus HuB4-10]
gi|402415593|gb|EJV47916.1| hypothetical protein IEA_02518 [Bacillus cereus BAG4X2-1]
gi|402418424|gb|EJV50720.1| hypothetical protein IEK_02442 [Bacillus cereus BAG6O-1]
gi|402462809|gb|EJV94513.1| hypothetical protein IGI_02433 [Bacillus cereus HuB2-9]
Length = 341
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 106/272 (38%), Gaps = 45/272 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G K F +++
Sbjct: 2 KILIL----GGTRFLGRAFVEEALKRGHEVTLFNRG------TNKEIFPEVEQLI----- 46
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK--- 192
GD + + +DVV+D G + +R V + K + VK ++FISS +YK
Sbjct: 47 ---GDRNNDVSSLENRKWDVVIDTCGFSPHHIRNVGEVLKDN-VKHYIFISSLSVYKDWI 102
Query: 193 --------------PADEPPHVEGDVVKPDAGHVQVEKYISENFSN--W----ASFRPQY 232
+D VE + P H K + E + W R
Sbjct: 103 LHHIKEDYILQPEPTSDRIKAVENGEISP-YEHYGALKVLCEKEAEKYWPGRVLHVRAGL 161
Query: 233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
+ G + D ++ R+ + V +PG + + ++D++S VEN +A + NI
Sbjct: 162 LSGMFDYTDRLPYWVQRVAKGGKVLVPGRKDRPVQLVDIKDVASFGLNMVENNKAGTFNI 221
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
+ +T++ + C + E V D
Sbjct: 222 TG--PNDELTMEELLNTCKKVTNSDAEFVWVD 251
>gi|320168804|gb|EFW45703.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 297
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 228 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
RP ++ G G E WF V IP + Q++ I H DL+ VENP+
Sbjct: 155 LRPGFVFGKGA-AHFERWFAQFHKNVPEVVIPAAERQYSYI-HADDLAEAYQRVVENPKI 212
Query: 288 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
AS +++ + D +T A++ A+AAG ++V D
Sbjct: 213 ASGSVYTIGDDSRITHIEFARVFAKAAGYQGKLVASD 249
>gi|119383422|ref|YP_914478.1| NAD-dependent epimerase/dehydratase [Paracoccus denitrificans
PD1222]
gi|119373189|gb|ABL68782.1| NAD-dependent epimerase/dehydratase [Paracoccus denitrificans
PD1222]
Length = 310
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 92/241 (38%), Gaps = 38/241 (15%)
Query: 160 NGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV---VKPDAGHVQVEK 216
+ N+ A R + D A+ +GVK+F+ SS IY + V D V+P + + + ++
Sbjct: 77 HAANVLATRRLLDAAEGAGVKRFVLASSPSIYADGTDRLDVAEDAPLPVRPLSLYAESKR 136
Query: 217 YISENFSNWA------SFRPQYMIGSGNNKDCEEWFFDRIV---RKRPVPIPGSGMQFTN 267
A + RP+ + G + R++ R +P+ G +
Sbjct: 137 AAERMVLGRAGAMICTAIRPRAIYGRHDRA-----LLPRVIDAMRHGRLPMIRGGRALID 191
Query: 268 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 327
+ H D + + LA P ++N+ S A + ++ A+ +GLPV +
Sbjct: 192 LTHRHDAARGMILAASGPR---GGVWNITSGEAFRFRDLVEIIARRSGLPVRSLPLPHGL 248
Query: 328 AGIDAKKAFPFRNMHFYAEPR------------------AAKDILGWRSTTNLPEDLKER 369
A A + M AEPR AA+ LG+R E + E
Sbjct: 249 ARWLAGASEGLARMRGGAEPRLTLQAVASLGSSLTLDISAARRDLGYRPQVGFEEGVAEC 308
Query: 370 F 370
F
Sbjct: 309 F 309
>gi|67473445|ref|XP_652489.1| dTDP-D-glucose 4,6-dehydratase [Entamoeba histolytica HM-1:IMSS]
gi|56469346|gb|EAL47103.1| dTDP-D-glucose 4,6-dehydratase, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705117|gb|EMD45233.1| dTDPD-glucose 4,6-dehydratase, putative [Entamoeba histolytica
KU27]
Length = 341
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 101/223 (45%), Gaps = 21/223 (9%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE---KYIS 219
N+ + + +K++ +K+F+ +S+ +Y E ++ P + + ++I+
Sbjct: 108 NIYGTHVLLEVSKANHIKRFIHVSTDEVYGQVIGNAATENSLLNPTNPYAATKAGAEFIA 167
Query: 220 ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV--------RKRPVPIPGSGMQFTNIAHV 271
+F + SF +I GNN F ++++ R + PI GSG + + +V
Sbjct: 168 RSF--YQSFGLPLIITRGNNVFGPHQFPEKLIPKFITLLDRGKNCPIHGSGEEKRSFIYV 225
Query: 272 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID 331
+D+ + + + + I+N+ + R ++ + +A +P E D + ++
Sbjct: 226 QDVVNAFDVVLR--KGIVGQIYNIGTTREISNNEVAHALLDIFQVPKE--EQDSRIYHVE 281
Query: 332 AKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 374
+ F N Y+ + + LGWR+TT+ E LK+ E Y+
Sbjct: 282 -NRCF---NDQRYSLDVSKLEKLGWRATTSFEEGLKKTVEWYL 320
>gi|417103981|ref|ZP_11961245.1| putative mRNA-binding protein [Rhizobium etli CNPAF512]
gi|327191079|gb|EGE58131.1| putative mRNA-binding protein [Rhizobium etli CNPAF512]
Length = 326
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 105/264 (39%), Gaps = 35/264 (13%)
Query: 85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF-NRFNEIVSAGGKTVWGDPAE 143
GG I + + + +GH V++ G +K P + IV G + + A+
Sbjct: 9 GGTGQISYPCVERAVAAGHHVSVFNRG------LKSAPLPAGVSSIVGELGSGAYAELAK 62
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAV-RPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVE 201
V +DVV D + R + ++ G Q++FISSA +Y KP+ E
Sbjct: 63 V-------NYDVVCQFIAFTPDQIARDIEVFSGKCG--QYIFISSASVYEKPSRHYVITE 113
Query: 202 GD-VVKPDAGHVQVEKYISENFSN-----WASFRPQYMIGSG--NNKDCEEWFFDRIVRK 253
+ P + Q + E W RP + + +G E R++
Sbjct: 114 ETPAINPYWPYSQAKIACEELLKKSGNLAWTIVRPSHTVRTGLPMMMGDSEIMARRLLDG 173
Query: 254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 313
P+ + G G + D + + + +AA + IF++ SDRA D + K A+
Sbjct: 174 EPIIVAGDGHTPWTLTRSADFAVPF-VGLFGKQAAVNEIFHITSDRAHIWDDIQKTIARL 232
Query: 314 AGLPVEIVH--------YDPKAAG 329
G+ +IVH Y+P+ G
Sbjct: 233 LGVEAKIVHVPTDTLIKYNPEWVG 256
>gi|384515847|ref|YP_005710939.1| UDP-glucose 4-epimerase [Corynebacterium ulcerans 809]
gi|334697048|gb|AEG81845.1| UDP-glucose 4-epimerase [Corynebacterium ulcerans 809]
Length = 327
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 129/337 (38%), Gaps = 66/337 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G A LL GHEVTI+ D NR E V AG V GD +
Sbjct: 6 TGGAGYVGSVCAAVLLEQGHEVTIV-------DNFSTG--NR--EAVPAGATLVEGDIRD 54
Query: 144 VGN-VVGGVTFDVVLDNNGKNL---DAVRPVADWA-------------KSSGVKQFLFIS 186
N ++ ++D VL ++L +P W +++ V +F S
Sbjct: 55 KANEILASDSYDAVLHFAARSLVGESVEKPSEYWQHNFVTTLALLDAMRTNNVTNLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFRPQYMIGS-- 236
+A Y P E +P + + I +++A S R + G+
Sbjct: 115 TAATYGEPASVPITEDFPTQPTNPYGATKLAIDHAITSYAHAYGLSATSLRYFNVAGAYG 174
Query: 237 --GNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVE 283
G N++ E I++ + + + G G + H+RDL+ LA+E
Sbjct: 175 DIGENREVETHLIPLILQVALGHRDKILMFGDDWPTEDGTAVRDYIHIRDLADAHVLAME 234
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG--LPVEIVHYDPKAAGIDAKKAFPFRNM 341
+ + IFNL S ++ + + C G +P E+ P+ AG A
Sbjct: 235 SNQPGVHRIFNLGSGEGFSVKQVIEACRTVTGHPIPAEVA---PRRAGDPAV-------- 283
Query: 342 HFYAEPRAAKDILGWRST-TNLPEDLKERFEEYVKIG 377
A A+ LGW T T+L +++ + K+G
Sbjct: 284 -LIASSAKAQSELGWHPTRTDLSTIVEDAWSFTSKLG 319
>gi|312880518|ref|ZP_07740318.1| NAD-dependent epimerase/dehydratase [Aminomonas paucivorans DSM
12260]
gi|310783809|gb|EFQ24207.1| NAD-dependent epimerase/dehydratase [Aminomonas paucivorans DSM
12260]
Length = 310
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 117/318 (36%), Gaps = 51/318 (16%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G L + L G G ++ E D ++ RF V+ A+
Sbjct: 10 AGHRGLVGSALVRALRGEGFSNLLLRTRQE-LDLCRQEAVERF--FREERPDYVFLAAAK 66
Query: 144 VGNV-----VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-----KP 193
VG + GG D +L +NL V D A+S G ++ LF+ S+ IY +P
Sbjct: 67 VGGIGANSACGG---DFIL----QNLLIQTHVLDCARSFGTRKLLFLGSSCIYPKFAPQP 119
Query: 194 ADEPPHVEGDV--------VKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-- 243
E ++G + V AG V + S P + G G+N D E
Sbjct: 120 IREESFLDGKLEPTNEPYAVAKIAGVVAARALARQYGCPMVSVMPTNLYGPGDNFDLETS 179
Query: 244 -------EWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
F + + P V + G+G HV DL+ L +E E I N+
Sbjct: 180 HVLPALIRRFHEAAEVQAPSVTLWGTGTPRREFLHVDDLARACLLVMERYEG--EGILNV 237
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILG 355
+ + + +A+L A+ G I+ +DP +K M LG
Sbjct: 238 GTGEDLPIRDLAELVARETGYGGRIL-WDPYRPDGTPRKVLDVERMK----------ALG 286
Query: 356 WRSTTNLPEDLKERFEEY 373
W L E ++E Y
Sbjct: 287 WEPRIGLEEGVRETVRWY 304
>gi|162455285|ref|YP_001617652.1| NDP-sugar oxidoreductase [Sorangium cellulosum So ce56]
gi|161165867|emb|CAN97172.1| NDP-sugar oxidoreductase [Sorangium cellulosum So ce56]
Length = 347
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 113/298 (37%), Gaps = 34/298 (11%)
Query: 74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
KKKVLI +GG +G L + LL G++VT + + D P +R E+
Sbjct: 3 KKKVLI----TGGAGFLGINLVRHLLERGYDVTSLDLLD-----FDYPERSRIREV---- 49
Query: 134 GKTVWGDPAEVGNVVGGVTFDV----------VLDNNGKNLDAVRPVADWAKSSGVKQFL 183
+ D A V V G F V + ++ R V A+ GV++ +
Sbjct: 50 -RGDIRDAAVVDAAVKGHDFVVHTAAALPLYTAEEIYTTDVIGTRLVMSAARRHGVERAV 108
Query: 184 FISSAGIYKPADEPPHVEGD----VVKPDAGHVQVEKYISENFSNWAS---FRPQYMIGS 236
ISS +Y D P E D V +Q E E RP+ IG
Sbjct: 109 HISSTAVYGIPDHHPLCEDDRLDGVGPYGQAKIQAEVVCLEERGRGLVVPIIRPKSFIGP 168
Query: 237 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 296
+D + + P+ G G + V DL +TL + + +++ FN+
Sbjct: 169 -ERLGVFALLYDWALDGKGFPMIGDGKNRYQLLDVADLCEAITLCMTKEASIANDTFNIG 227
Query: 297 SDRAVTLDGMAKLCAQAAGLPVEIVHY--DPKAAGIDAKKAFPFRNMHFYAEPRAAKD 352
+ T+ + A G +IV + P G+ A +A ++ + A+KD
Sbjct: 228 AKDFTTMGEDYQAVLDAVGKGKKIVPFPAAPAVLGLRALEAMGVSPLYKWVYETASKD 285
>gi|363420374|ref|ZP_09308466.1| UDP-glucose 4-epimerase [Rhodococcus pyridinivorans AK37]
gi|359735616|gb|EHK84573.1| UDP-glucose 4-epimerase [Rhodococcus pyridinivorans AK37]
Length = 327
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 110/286 (38%), Gaps = 52/286 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+GG +G LL GH+V + V D ++ E V G + V GD A
Sbjct: 6 TGGAGYVGSVCTTVLLEQGHDVVV--VDDLSTGNA---------EAVPTGAEFVEGDIAA 54
Query: 144 VGN-VVGGVTFDVVLDNNGKNL--DAVR-PVADW-------------AKSSGVKQFLFIS 186
V + ++ G FD VL ++L ++V P W + SG + +F S
Sbjct: 55 VADELLSGSRFDGVLHFGAQSLVGESVEFPEKYWQGNVVTTLALLQAVRRSGTPRLVFSS 114
Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--------SFR----PQYMI 234
+A Y D P E +P + + I S++A S R
Sbjct: 115 TAATYGEPDSVPITEDAPTRPTNPYGASKLAIDHAISSYAHAHGLAATSLRYFNVAGAYG 174
Query: 235 GSGNNKDCEEWFFDRIVR-----KRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVE 283
G+G N+ E +++ + + + G+ G + HV+DL+ LA+
Sbjct: 175 GAGENRVVETHLIPLVLQVALGVRDHISVFGTDWPTKDGTAVRDYIHVKDLADAHVLALT 234
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
E I+NL S T+ + C + GLP+ V P+ AG
Sbjct: 235 KSEPGRHGIYNLGSGEGFTVREVISACERVTGLPIAAVDA-PRRAG 279
>gi|332157986|ref|YP_004423265.1| UDP-glucose 4-epimerase [Pyrococcus sp. NA2]
gi|331033449|gb|AEC51261.1| UDP-glucose 4-epimerase [Pyrococcus sp. NA2]
Length = 306
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F +R +R P+ I G G Q + V+D+ L V E A+ +FN+ + R +
Sbjct: 186 FMERAIRGEPLIIYGDGKQTRDFIFVKDVVDA-NLLVAKKERANGEVFNVATGRETMIID 244
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTT 360
+A + + P +I+ Y P+ I R+ DI LG++
Sbjct: 245 LALKVIELSSSPSQIIFYPPRPGDIK----------------RSVADIGKIRKLGFKPKY 288
Query: 361 NLPEDLKERF 370
+L E LKE F
Sbjct: 289 SLEEGLKETF 298
>gi|218898106|ref|YP_002446517.1| isoflavone reductase [Bacillus cereus G9842]
gi|218544419|gb|ACK96813.1| isoflavone reductase [Bacillus cereus G9842]
Length = 345
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 117/293 (39%), Gaps = 49/293 (16%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G + +E L GHEVT+ G K F +++
Sbjct: 2 KILIL----GGTRFLGRAVVEEALNRGHEVTLFNRG------TNKEIFPEVEQLIGDRN- 50
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
GD + + N +DVV+D G + +R D K + +K ++FISS +YK D
Sbjct: 51 ---GDVSSLEN----RKWDVVVDTCGFSPHHIRNTGDVLKDN-IKHYIFISSLSVYK--D 100
Query: 196 EPPH--VEGDVVKPDAGHVQVEKYISENFSNWASF----------------------RPQ 231
PH E +++P+ Q++ + S + + R
Sbjct: 101 WIPHDIKEDYILQPEPTEEQIKAVENGEVSPYEHYGALKVLCEKEAEKYWPGRVLHVRAG 160
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G + D ++ R+ + V +PG + I ++D+++ EN A + N
Sbjct: 161 LLSGMFDYTDRLPYWIGRVAKGGKVLVPGRKDRPVQIVDIKDVANWGLNMAENKNAGTFN 220
Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFY 344
+ D +T++ + C + E V + + ++ K P+ M +
Sbjct: 221 VTGPNYD--LTMEELLNTCKKVTNSDAEFVWIE--ESFMNEHKVQPWTEMPLW 269
>gi|422294395|gb|EKU21695.1| dTDP-glucose 4,6-dehydratase [Nannochloropsis gaditana CCMP526]
Length = 358
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKP--ADEPPHVEGDVVKPDAGHVQVE---KY 217
N+ + + AK +K+F+ +S+ +Y AD+ P E V++P + + ++
Sbjct: 119 NILGTHVLLESAKVHNIKRFIHVSTDEVYGEGAADQEPMFEDQVLEPTNPYAATKAGAEF 178
Query: 218 ISENFSNWASFRPQYMIGSGNN--------KDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 269
I++++S SF +I GNN + F + ++R RPV + G+G+ N
Sbjct: 179 IAKSYSR--SFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFL 236
Query: 270 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 329
+V D++ + + + I+N+ +AK + G H +
Sbjct: 237 YVEDVARAFEVILH--RGVTGKIYNIGGTHEKANIEVAKDLIRLMG------HGKEEEKM 288
Query: 330 IDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 373
+ + F ++ + A K LGWR + + L + E Y
Sbjct: 289 LQFVEDRAFNDLRYTVNSEALKQ-LGWREIVSWEDGLHKTVEWY 331
>gi|86359933|ref|YP_471823.1| NDP-glucose dehydratase epimerase [Rhizobium etli CFN 42]
gi|86284035|gb|ABC93096.1| probable NDP-glucose dehydratase epimerase protein [Rhizobium etli
CFN 42]
Length = 367
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 246 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 305
F R+ +P I G Q + HVRD+++ LA+E P AA+ ++ N+ S +A ++
Sbjct: 226 FGSRLANGQPPMIFEDGKQRRDFVHVRDVATAFRLALEKP-AAAGHVINIGSGQAYSIAD 284
Query: 306 MAKLCAQAAGLPVEIVHYDPKAAGID-AKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPE 364
+A L A A G+P EI G D KKA + +A+ A+++LG+ L
Sbjct: 285 VATLLADAMGVP-EI--------GPDIMKKARSGDIRNCFADISKARELLGFEPKYRLEN 335
Query: 365 DLKERFEEYVK 375
L F E+V+
Sbjct: 336 ALAP-FVEWVR 345
>gi|421277782|ref|ZP_15728597.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus mitis SPAR10]
gi|395873606|gb|EJG84697.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus mitis SPAR10]
Length = 326
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 70/357 (19%), Positives = 138/357 (38%), Gaps = 89/357 (24%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF-------- 126
K VL+ +G +G Y+ EL+ G++V + ++ + F
Sbjct: 2 KTVLV----TGATGFLGKYVVDELVQHGYQVRAFGRNSKVGRSLENSSISFFQGDLTKAD 57
Query: 127 ---------NEIVSAGG-KTVWGDPAE---VGNVVGGVTFDVVLDNNGKNLDAVRPVADW 173
+ +V AG TVWG P E + NV+G + V +
Sbjct: 58 DVLEACKGMDLVVHAGALSTVWG-PWEDFYLANVLG-----------------TKYVLEA 99
Query: 174 AKSSGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF---- 228
+ +G+++ +++SS IY P D+ E D P+ ++ YI ++ F
Sbjct: 100 CRQAGIQRLVYVSSPSIYAAPRDQLGIKESDA--PEENNLN--NYIRSKLASEKLFKDYP 155
Query: 229 -------RPQYMIGSGNNKDCEEWFFDRIV---RKRPVPIPGSGMQFTNIAHVRDLSSML 278
RP+ + G G+ R++ +K +P+ G G Q ++ V +++ +
Sbjct: 156 DVPSIILRPRGLFGIGDTS-----ILPRVINLSQKLGIPLIGDGRQLMDMTCVENVALAI 210
Query: 279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK-AAGIDAKKAFP 337
LA+E PE A ++N+ + + + G P++ +GI + F
Sbjct: 211 RLAIEAPE-AKGEVYNITNGEPRAFRDLLEESLTGLGYPIKYRKIPASLLSGIASSLEFI 269
Query: 338 FRNMHFYAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 375
++ ++ EP +A KD LG+ + E +++ ++Y K
Sbjct: 270 YKTLNLKGEPPLTRYTYYLLRYSQTLDISKAEKD-LGYHPKIRISEGIEQYVQDYRK 325
>gi|417937985|ref|ZP_12581284.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus infantis SK970]
gi|343391626|gb|EGV04200.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus infantis SK970]
Length = 274
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 107/260 (41%), Gaps = 45/260 (17%)
Query: 129 IVSAGG-KTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS 187
+V AG TVWG P E D N+ + + + + + +++ +++SS
Sbjct: 17 VVHAGALSTVWG-PWE--------------DFYQANILGTKYILEACRQTDIQRIVYVSS 61
Query: 188 AGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF-----------RPQYMIG 235
IY P D+ E DV P+ ++ YI S+ F RP+ + G
Sbjct: 62 PSIYAAPKDQLVIKESDV--PEENNLN--NYIRSKLSSEKLFKDYPDVPSIILRPRGLFG 117
Query: 236 SGNNKDCEEWFFDRIV---RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
G+ R++ +K +P+ G G Q ++ V +++ + LA+E PE A +
Sbjct: 118 IGDTS-----ILPRVINLSQKIGIPLIGDGRQLMDMTCVENVALAIRLALEAPE-AKGEV 171
Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK-AAGIDAKKAFPFRNMHFYAEP---R 348
+N+ + + + G P+ +GI + F ++ ++ EP R
Sbjct: 172 YNITNGEPRAFRDLLEESLTGLGYPIRYRKIPASLLSGIASSLEFIYKTLNLKGEPPLTR 231
Query: 349 AAKDILGWRSTTNLPEDLKE 368
+L + T ++ + ++E
Sbjct: 232 YTYYLLRYSQTLDISKAMRE 251
>gi|241204373|ref|YP_002975469.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240858263|gb|ACS55930.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 317
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 47/259 (18%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
+VL++ GH +G YL L+ +GH+V ++ G P+ + + +
Sbjct: 2 RVLVIGAT--GH--VGTYLVPRLVEAGHDVVTISRGTAK-------PYTANHAWAAVDQR 50
Query: 136 TV----WGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
+ + G V GV D+V+D +L++ + A S V FL + +
Sbjct: 51 QMDRAAMEQTGDFGPAVRGVKADIVIDMICFSLESAEHLVT-ALSGHVGHFLHTGTIWTH 109
Query: 192 KPADEPPHVE-------GDVVKPDAGHVQVEKYISENFSNWASFR--------PQYMIGS 236
+ P +E GD A +E Y+ + A R P +++G
Sbjct: 110 GHSTVVPTLEETPKFPFGDYGTQKAA---IETYLLQQ----ARLRGFPATIIHPGHIVGP 162
Query: 237 G-------NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
G N + + F + R + +P G++ + H D+++M A+ N A++
Sbjct: 163 GWTPLNPAGNFNLQ--VFSTLARGETLALPHFGLETVHHVHADDVAAMFMDAIANWNAST 220
Query: 290 SNIFNLVSDRAVTLDGMAK 308
F+ VS++A+TL G A+
Sbjct: 221 GESFHAVSEQALTLRGYAE 239
>gi|229197220|ref|ZP_04323952.1| NAD-dependent epimerase/dehydratase [Bacillus cereus m1293]
gi|228586252|gb|EEK44338.1| NAD-dependent epimerase/dehydratase [Bacillus cereus m1293]
Length = 359
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 112/279 (40%), Gaps = 59/279 (21%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
K+LI+ GG +G +E L GHEVT+ G ++K P +
Sbjct: 21 KILIL----GGTRFLGRAFVEEALNRGHEVTLFNRG---TNKELFPEVEQL--------- 64
Query: 136 TVWGDPAEVGNVVGGVT------FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
+G+ GGV+ +DVV+D G + +R V + + ++ ++FISS
Sbjct: 65 --------IGDRNGGVSSLENRKWDVVVDTCGFSPHHIRNVGE-VLTDNIEHYIFISSLS 115
Query: 190 IYKPADEPPHVEGD-VVKPDAGHVQVEKYISENFSNWASF-------------------- 228
+YK P H++ D +++P+ Q++ + S + +
Sbjct: 116 VYKDWI-PHHIKEDYILQPEPTEEQIKAVENGEVSPYEYYGALKVLCEKEAEEYWPRRVL 174
Query: 229 --RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 286
R + G + D ++ R+ + V +PG + I ++D+++ EN
Sbjct: 175 HVRAGLLSGMFDYTDRLPYWIQRVAKGGKVLVPGRKDRPVQIVDIKDVANWGLNMAENKN 234
Query: 287 AASSNIFNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYD 324
A IFN+ + +T++ + C + E V D
Sbjct: 235 AG---IFNVTGPNYDLTMEELLNTCKKVTHSDAEFVWVD 270
>gi|170691272|ref|ZP_02882437.1| NAD-dependent epimerase/dehydratase [Burkholderia graminis C4D1M]
gi|170143477|gb|EDT11640.1| NAD-dependent epimerase/dehydratase [Burkholderia graminis C4D1M]
Length = 318
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 120/325 (36%), Gaps = 61/325 (18%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-----IVSAGGKTVW 138
+G ++G L + L+ +G+ ++T D M + NRF E +V V
Sbjct: 10 AGHRGMVGSALVRRLVAAGY-TNVVTRTRLELDLMDQAAVNRFFEAEKIDVVLLAAARVG 68
Query: 139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEP 197
G A + ++V++ N V A + V++ +F S+ IY K +P
Sbjct: 69 GIFANASRPGEFIYENLVIETN---------VIHAAYRAQVERLVFFGSSCIYPKQCPQP 119
Query: 198 ------------PHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEE- 244
P + + AG E Y E + + S P + G +N D +
Sbjct: 120 IREEYLLTSSLEPTNDAYAIAKIAGLKLCEAYNCEYNTQYVSLMPTNLYGPNDNYDLKSS 179
Query: 245 WFFDRIVRKR---------PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
++RK + + GSG HV DL++ +EN +FN+
Sbjct: 180 HVLPALLRKAHEAKLNGADTLTVWGSGTPRREFLHVDDLAAATLFVLENN--VMEGLFNV 237
Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-- 353
+++ +A+ + G E+V K G PR D+
Sbjct: 238 GVGEDLSIRELAECICKVVGFDGELVFDASKPDGT----------------PRKLLDVSR 281
Query: 354 ---LGWRSTTNLPEDLKERFEEYVK 375
+GWR+T L + + + E+V+
Sbjct: 282 LAQMGWRATIGLEQGIASTYREFVE 306
>gi|209549958|ref|YP_002281875.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209535714|gb|ACI55649.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 326
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 112/278 (40%), Gaps = 49/278 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVL + GG I + + + GH+V++ G N+ IV G
Sbjct: 4 KVLFI----GGTGQISYPCVERAVAEGHQVSVYNRGLRNAGLPAG-----VTSIVGELGS 54
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAV-RPVADWAKSSGVKQFLFISSAGIYKPA 194
+ D A+ GN +DVV D V R + ++ S G Q++FISSA +Y
Sbjct: 55 GAYADLAK-GN------YDVVCQFIAFTPDQVARDIEVFSGSCG--QYIFISSASVY--- 102
Query: 195 DEPPH-----VEGDVVKPDAGHVQVEKYISENFSNWASF-----RPQYMIGSG-----NN 239
++PP E + P + Q + E A+ RP + + +G +
Sbjct: 103 EKPPRHYVITEETPAINPHWPYSQAKIACEELLKQSANLACTIVRPSHTVRTGLPIMMGD 162
Query: 240 KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
D R++ P+ + G G + D + + + +AA + IF++ SDR
Sbjct: 163 SDV---MARRMLDGEPIIVAGDGHTPWTLTRSIDFAVPF-VGLFGKQAALNKIFHITSDR 218
Query: 300 AVTLDGMAKLCAQAAGLPVEIVH--------YDPKAAG 329
A D + K A+ G+ +IVH Y+P+ G
Sbjct: 219 AHIWDDIQKTIARLLGVEAKIVHVPTDTLIRYNPEWVG 256
>gi|160878868|ref|YP_001557836.1| NAD-dependent epimerase/dehydratase [Clostridium phytofermentans
ISDg]
gi|160427534|gb|ABX41097.1| NAD-dependent epimerase/dehydratase [Clostridium phytofermentans
ISDg]
Length = 339
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 112/288 (38%), Gaps = 52/288 (18%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVL + GG +I ++K+LL E+ ++ G+ N D + K
Sbjct: 2 KVLFI----GGTGIISQAISKQLLKQNSELYVLNRGNRNMD-------------LPTNVK 44
Query: 136 TVWGDPAE---VGNVVGGVTFDVVLDNNGKNLDAVRP---VADWAKSSG-VKQFLFISSA 188
T+ D E V ++ + FDVV D A P D+ G KQ++FISSA
Sbjct: 45 TIIADINEEEKVKELIKDLEFDVVAD-----FIAFVPEHLERDYRLFQGKTKQYIFISSA 99
Query: 189 GIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYM---- 233
Y KP + P+ E K ++ Y ENF RP +
Sbjct: 100 SAYQKPLSDYRINEGTPLSNPYWEYSRNKIHCEEYLMKLYREENFP-VTIVRPSHTYDEK 158
Query: 234 ---IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
+G K + DR+++ +PV I G G + H D + + N A
Sbjct: 159 SIPLGVHGRKGSYQ-VIDRMLKGKPVIIHGDGTSLWTMTHNSDFAKGFLGLMGNIHAIGE 217
Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 338
++ + SD +T + + + A L VE Y ++ +DA + F
Sbjct: 218 SV-QITSDETLTWNQIYQCIADC--LSVEFKPYYVSSSFLDAVSEYDF 262
>gi|425449032|ref|ZP_18828876.1| UDP-glucose 4-epimerase [Microcystis aeruginosa PCC 7941]
gi|389765118|emb|CCI08928.1| UDP-glucose 4-epimerase [Microcystis aeruginosa PCC 7941]
Length = 326
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 79/158 (50%), Gaps = 21/158 (13%)
Query: 177 SGVKQFLFISSAGIYKPADEPPHV--EGDVVKPDAGH----VQVEKYISE----NFSNWA 226
+GVK F+F+SS I+ A E ++ E PD+ + +Q E+ + E + W
Sbjct: 107 AGVKHFIFVSS--IHAMAAESDNILNENSPCHPDSPYGRSKLQAEQALIEIAKDSDMTWT 164
Query: 227 SFRPQYMIGSGNNKDCEEWFFDRIVR--KRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVE 283
RP + G GN + E R+++ KR +P+P G+ + V +L + + ++
Sbjct: 165 ILRPTLVYGLGNRANME-----RLMKLIKRGLPLPFGAIKNRRSFVFVGNLVAAIITCLD 219
Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
+P AA+ IF + ++AV+ + +L AQ P +++
Sbjct: 220 HPNAANQ-IFLISDNQAVSTPQLIRLIAQQIQQPCQLL 256
>gi|312621472|ref|YP_004023085.1| nad-dependent epimerase/dehydratase [Caldicellulosiruptor
kronotskyensis 2002]
gi|312201939|gb|ADQ45266.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor
kronotskyensis 2002]
Length = 309
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 120/320 (37%), Gaps = 51/320 (15%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G ++G + + L G+ ++ G E D ++ RF E + V+ A+
Sbjct: 10 AGHRGLVGSAIVRRLQKEGY-TNLVLKGREEVDLTRQEEVERFFE--KERPEYVFLAAAK 66
Query: 144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-----KPADE-- 196
VG + T+ +NL V A GVK+ LF+ S+ IY +P E
Sbjct: 67 VGGIHANRTYPAEFIY--QNLMIECNVIHSAYKYGVKKLLFLGSSCIYPRECPQPMKEEY 124
Query: 197 ------PPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE------- 243
P E V AG + Y + +N+ S P + G +N D
Sbjct: 125 LLSGYLEPTNEAYAVAKIAGLKLCQYYKRQYGANFISCMPTNLYGPNDNFDLHTSHVIPA 184
Query: 244 --EWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
F + + +P V + G+G HV DL+ ++N + N+ S
Sbjct: 185 LIRKFHEAKINNKPYVEVWGTGKSLREFLHVDDLADACLFLMKNYD--DEIWINVGSGEE 242
Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LG 355
V++ +A + + AG EI+ ++P PR DI LG
Sbjct: 243 VSIAELANMIKEIAGYKGEIL-FNPDMPD---------------GTPRKLLDISRLKSLG 286
Query: 356 WRSTTNLPEDLKERFEEYVK 375
W +L + L +E YV+
Sbjct: 287 WERKISLYDGLMSTYEWYVE 306
>gi|218530267|ref|YP_002421083.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens
CM4]
gi|218522570|gb|ACK83155.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens
CM4]
Length = 307
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 87/219 (39%), Gaps = 43/219 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE 143
+G IG +L + L G+ V ++ R E+ V GD A
Sbjct: 9 TGATGFIGRHLLRALSERGYRVRVL--------------LRRPVEVPEGASGAVVGDLAR 54
Query: 144 VGNVVGGVT-FDVVLDNNG---------------KNLDAVRPVADWAKSSGVKQFLFISS 187
N+ +T D V+ + G N +A R +AD A+ + V +F+F+SS
Sbjct: 55 PMNMAAALTGVDAVVHSAGLAHAMSGAPEDDFRNSNTEATRKLADAAQRARVGRFVFLSS 114
Query: 188 AGIYKPADEP-PHVEGDVVKP----DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC 242
+ P P E D +P + E+ ++E +W + RP + G+G +
Sbjct: 115 IRAQAGSSAPVPLSEADAPEPTDPYGRSKLAAEEALAETGLDWVALRPVLVYGAGVKGNM 174
Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 281
++ R P P+P ++A R L S+ +LA
Sbjct: 175 AALL--KLART-PYPLP-----LASLAGRRSLVSVESLA 205
>gi|13540890|ref|NP_110578.1| UDP-glucose 4-epimerase [Thermoplasma volcanium GSS1]
gi|14324272|dbj|BAB59200.1| NDP-sugar epimerase [Thermoplasma volcanium GSS1]
Length = 312
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 113/277 (40%), Gaps = 43/277 (15%)
Query: 73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA 132
E K++LI +GG IG + + LL +EVT++ D+ K ++ N
Sbjct: 2 ENKRILI----TGGAGFIGSNMVEHLLPK-NEVTVIDNLSITDDRYIKKFYDNPNF---- 52
Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLD-------NNGK---------NLDAVRPVADWAKS 176
K + D + N + G +D+V+ NG N++ V + +
Sbjct: 53 --KFIKKD---ILNGIDGYHYDIVVHLAADSDVRNGSSNPALDMKVNVEGTISVLEMMRK 107
Query: 177 SGVKQFLFISSAGIYKPADEPPHVEGD-----VVKPDAGHVQVEKYISENFS----NWAS 227
S +K LF SS+ +Y A P E + A + E +IS S N
Sbjct: 108 SDIKDILFASSSTVYGEAKVIPTPENYGPLLPISSYGASKLAAEAFISAYASYYGFNALL 167
Query: 228 FRPQYMIGSGNNKDCEEWFFDRIVR-KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 286
FR ++G + F +++ K+ + + G G Q + HV DL + E+ +
Sbjct: 168 FRFANVVGKNSTHGVIFDFINKLKNNKKELEVLGDGTQAKSYIHVEDLIGSMIYVYEHVK 227
Query: 287 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLP-VEIVH 322
FNL +D ++D +AK +A GL IVH
Sbjct: 228 GVEP--FNLGNDDVTSVDKIAKFVLEAMGLKDTAIVH 262
>gi|392422595|ref|YP_006459199.1| epimerase [Pseudomonas stutzeri CCUG 29243]
gi|390984783|gb|AFM34776.1| epimerase [Pseudomonas stutzeri CCUG 29243]
Length = 309
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 29/186 (15%)
Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 222
NL + + + SGVK+ LF SSA +Y E ++ D K +K SE++
Sbjct: 96 NLIGTLNLCEAMRESGVKRVLFASSAAVYGNNGEGHAIDEDTPKAPLTPYAADKLASEHY 155
Query: 223 SNWASFRPQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFT 266
++ +R Q+ + G +D F +R + P+ + G G Q
Sbjct: 156 LDF--YRRQHGLEPVVFRFFNIFGPRQDPSSPYSGVISIFTERAQKGLPIAVFGDGEQTR 213
Query: 267 NIAHVRDLSSMLTLAVENPEAA----------SSNIFNLVSDRAVTLDGMAKLCAQAAGL 316
+ +V DL +L A+E+PEA ++++ L++ L G+ K+ QAA
Sbjct: 214 DFLYVADLVEVLVQALESPEAVEGAVNVGLNQATSLNQLLAAIGDVLGGLPKVSYQAA-R 272
Query: 317 PVEIVH 322
P +I H
Sbjct: 273 PGDIRH 278
>gi|407368381|ref|ZP_11114913.1| NAD-dependent epimerase/dehydratase [Pseudomonas mandelii JR-1]
Length = 309
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 109/276 (39%), Gaps = 39/276 (14%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNR------FNEIVSAG---- 133
+GG IG +L LL GH V I+ D ++ K P + ++ A
Sbjct: 9 TGGAGFIGSHLTDALLAKGHSVRILD--DLSTGKRSNLPLDNPKVELVVGDVADAALVAQ 66
Query: 134 ---GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
G + A V +V V D + + N V + + +GVK+ L+ SSA +
Sbjct: 67 AMLGCSAVAHLAAVASVQASV--DDPVKTHRSNFIGSLNVCEAMRQAGVKRVLYASSAAV 124
Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---------GNNKD 241
Y E ++ D K +K SE + ++ +R Q+ + G +D
Sbjct: 125 YGNNGEGESIDEDTPKAPLTPYASDKLASEYYFDF--YRRQHGLEPVIFRFFNIFGPRQD 182
Query: 242 -------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
F +R + P+ + G G Q + +V DL +L A+E P+ + N
Sbjct: 183 PSSPYSGVISIFSERAQKGLPITVFGDGEQTRDFVYVEDLVDLLVQAIEQPQVEVGAV-N 241
Query: 295 LVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAG 329
+ ++A +L M + G LP V Y P +G
Sbjct: 242 VGWNQATSLKQMLEALEVVVGQLPP--VSYGPARSG 275
>gi|374295639|ref|YP_005045830.1| nucleoside-diphosphate-sugar epimerase [Clostridium clariflavum DSM
19732]
gi|359825133|gb|AEV67906.1| nucleoside-diphosphate-sugar epimerase [Clostridium clariflavum DSM
19732]
Length = 347
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 101/256 (39%), Gaps = 19/256 (7%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG--GKTVWGDP 141
+GG +G L + LL G EVT + + + + + +K I++ + +
Sbjct: 8 TGGAGFLGINLIRFLLNKGCEVTSLDIAEFDYEDVKDKV-----RIITGDIRDRKIVDQA 62
Query: 142 AEVGNVVGGVTFDVVL----DNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP 197
E ++V + L D ++D R V D A + GV++ + ISS +Y D
Sbjct: 63 MEQVDIVVHAAAALPLYKKEDIFSTDVDGTRNVVDSAFTHGVERVIHISSTAVYGIPDHH 122
Query: 198 PHVEGDVVKPDAGHVQVEKYISENFSNWAS-------FRPQYMIGSGNNKDCEEWFFDRI 250
P +E D + + Q + E + + RP+ IG +D
Sbjct: 123 PLMEDDKLDGVGPYGQAKIKAEEVCLEYRNKGMCIPIIRPKSFIGP-ERLGVFALLYDWA 181
Query: 251 VRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC 310
+ P+ GSG + V DL + LA E P+ ++ FN+ + T+ +
Sbjct: 182 KDGKNFPMIGSGNNRYQLLDVEDLCEAIYLAAEGPKDKVNDTFNIGAKEFTTMKEDYQAV 241
Query: 311 AQAAGLPVEIVHYDPK 326
AG +I+ + K
Sbjct: 242 LDYAGFGKKIIGFPAK 257
>gi|424919048|ref|ZP_18342412.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392855224|gb|EJB07745.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 326
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 112/278 (40%), Gaps = 49/278 (17%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
KVL + GG I + + + GH+V++ G N+ IV G
Sbjct: 4 KVLFI----GGTGQISYPCVERAVAEGHQVSVYNRGLRNAGLPAG-----VTSIVGELGS 54
Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAV-RPVADWAKSSGVKQFLFISSAGIYKPA 194
+ D A+ GN +DVV D V R + ++ S G Q++FISSA +Y
Sbjct: 55 GAYADLAK-GN------YDVVCQFIAFTPDQVARDIEVFSGSCG--QYIFISSASVY--- 102
Query: 195 DEPPH-----VEGDVVKPDAGHVQVEKYISENFSNWASF-----RPQYMIGSG-----NN 239
++PP E + P + Q + E A+ RP + + +G +
Sbjct: 103 EKPPRHYVITEETPAINPHWPYSQAKIACEELLKQSANLACTIVRPSHTVRTGLPIMMGD 162
Query: 240 KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
D R++ P+ + G G + D + + + +AA + IF++ SDR
Sbjct: 163 SDV---MARRMLDGEPIIVAGDGHTPWTLTRSIDFAVPF-VGLFGKQAALNEIFHITSDR 218
Query: 300 AVTLDGMAKLCAQAAGLPVEIVH--------YDPKAAG 329
A D + K A+ G+ +IVH Y+P+ G
Sbjct: 219 AHIWDDIQKTIARLLGVEAKIVHVPTDTLIRYNPEWVG 256
>gi|209549063|ref|YP_002280980.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209534819|gb|ACI54754.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 317
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 108/262 (41%), Gaps = 39/262 (14%)
Query: 76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
++L++ GH +G YL L+ +GH+V ++ G P+ S +
Sbjct: 2 RILVIGAT--GH--VGTYLVPRLVEAGHDVVTISRG-------AAKPYTENRAWASVDQR 50
Query: 136 TVWGDPAEV------GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
+ D AE+ G V V D+V+D L++ + A S V FL +
Sbjct: 51 RM--DRAEMERTGDFGPAVRDVKADIVIDMICFTLESAEQLVT-ALSGHVGHFLHTGTIW 107
Query: 190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISENF-SNWASFR--------PQYMIGSG--- 237
+ P +E + K G ++K E + A R P +++G G
Sbjct: 108 THGYPSAVPTLE-EAPKSPFGDYGIQKAAIETYLLQQARLRGFPATIIHPGHIVGRGWAP 166
Query: 238 ----NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
N + + F + R + +P G++ + H D+++M A+ N A++ F
Sbjct: 167 LNPAGNFNLQ--VFSTLARGDALALPNFGLETVHHVHADDVAAMFMGAIANWNASTGESF 224
Query: 294 NLVSDRAVTLDGMAKLCAQAAG 315
+ VS++A+TL G A+ + G
Sbjct: 225 HAVSEQALTLRGYAEAMSHWFG 246
>gi|434394389|ref|YP_007129336.1| dTDP-glucose 4,6-dehydratase [Gloeocapsa sp. PCC 7428]
gi|428266230|gb|AFZ32176.1| dTDP-glucose 4,6-dehydratase [Gloeocapsa sp. PCC 7428]
Length = 336
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 109/271 (40%), Gaps = 36/271 (13%)
Query: 75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVT-----IMTVGDENSDKMKKPPFNRFNEI 129
+KVL+ +G IG +L +L+ +GH+V M + + + P F
Sbjct: 5 RKVLV----TGVAGFIGSHLLDKLIAAGHQVVGIDNLCMGKLENIAHHLDNPAFKFLQRD 60
Query: 130 VSAGGKTVWGDPAEVGNVVGGVTFDV-----VLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
++ + + + + +V F + +D N V ++A+S K L
Sbjct: 61 ITEA--STFANLEDFDCLVHLAAFKIPRYGKAIDTLKINYQGTENVLEFARSRNCKCVL- 117
Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY-ISENFSNWASFRPQ----------YM 233
S++ +Y + P E D + V Y +S+ F +F Q
Sbjct: 118 ASTSDVYGRNPKLPFNEDDDSVLGSSKVARWSYAVSKLFDEHLAFAYQESYGFPVVILRF 177
Query: 234 IGSGNNKDCEEW-------FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 286
GS + W F ++I+ R + I G G+Q + ++ D + + A+ PE
Sbjct: 178 FGSYGPRHHLSWWGGPQSVFIEQILSDREIQIHGDGLQTRSFTYISDTVAGIYAAIIKPE 237
Query: 287 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 317
A+ IFN+ SDR +++ +AK + + P
Sbjct: 238 -ANGEIFNIGSDREISILNLAKTIKRLSDTP 267
>gi|427419645|ref|ZP_18909828.1| nucleoside-diphosphate-sugar epimerase [Leptolyngbya sp. PCC 7375]
gi|425762358|gb|EKV03211.1| nucleoside-diphosphate-sugar epimerase [Leptolyngbya sp. PCC 7375]
Length = 347
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 12/140 (8%)
Query: 180 KQFLFISSAGIYKPADEPPHVEGDVVKPD--------AGHVQVEKYISENFSNWASFRPQ 231
++F+ +S+ G++ DEPP E +KP G + + + ++ RP
Sbjct: 118 RRFVHVSTIGVHGHVDEPPGDENCPLKPGDIYQETKLEGEIWIRDFGQQSGLPVTVVRPA 177
Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
+ G G + + + ++V + VP G+G + HV DL++ A +P+A
Sbjct: 178 GIYGPGEKRLLKIY---KMVMQGWVPAIGNGGNLLHFVHVDDLTNFFIHAATHPQAMGE- 233
Query: 292 IFNLVSDRAVTLDGMAKLCA 311
+F S +A+T M L
Sbjct: 234 VFICGSQQAITFRDMVGLIG 253
>gi|108805895|ref|YP_645832.1| NAD-dependent epimerase/dehydratase [Rubrobacter xylanophilus DSM
9941]
gi|108767138|gb|ABG06020.1| NAD-dependent epimerase/dehydratase [Rubrobacter xylanophilus DSM
9941]
Length = 306
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 122/323 (37%), Gaps = 68/323 (21%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK---PPFNRFNEIVSAGGKTVWGD 140
+GG IG ++A++LL GHEV ++ +N K+ PP RF E
Sbjct: 6 TGGAGFIGSHVAEQLLSRGHEVAVL----DNLSTGKRENVPPGARFYE------------ 49
Query: 141 PAEVGNVVGGVTFDV---VLDNNGKNLDAVRPVA-----------------DWAKSSGVK 180
A+V + GV D + + +D R VA + GV+
Sbjct: 50 -ADVRDGCAGVFEDFRPEAVSHQAAQMDVRRSVAEPDFDAEVNVIGTVRLLEACVRGGVR 108
Query: 181 QFLFISSAG-IYKPADEPPHVEGDVVKPD--------AGHVQVEKYISENFSNWASFRPQ 231
+ +F S+ G IY +E P E P AG + Y ++ +A+ R
Sbjct: 109 RVVFASTGGAIYGEQEEFPATERHPQYPISPYGVSKLAGERYLHYYNAQYGLPYAALRYS 168
Query: 232 YMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN--P 285
+ G + E F R+ I G+G Q + +V D++ LA+EN P
Sbjct: 169 NVYGPRQDPHGEAGVVAIFCGRLAAGERATINGTGEQTRDYVYVGDVARANVLALENELP 228
Query: 286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 345
A +N+ + +++ + + + +G DP+ A P
Sbjct: 229 PGA----YNIGTGVETSVNELYERLRRLSGRD----DLDPEHG-----PAKPGEQQRSCV 275
Query: 346 EPRAAKDILGWRSTTNLPEDLKE 368
+P A ++GWR L LKE
Sbjct: 276 DPSLAGRVMGWRPEVGLDAGLKE 298
>gi|399156501|ref|ZP_10756568.1| NAD-dependent epimerase/dehydratase [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 309
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 130/328 (39%), Gaps = 64/328 (19%)
Query: 84 SGGHAVIGFYLAKELLGSGHEVTI---MTVGDENS------------------DKMKKPP 122
+GG IG +L+ +LL G +VTI ++ G E++ +K+
Sbjct: 6 TGGAGFIGSHLSNKLLKLGAKVTIVDNLSTGTESNIPSKCDFICLDLTENNFINKLPITT 65
Query: 123 FNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQF 182
+ F+ + G+ + DP +D+ + N + + W+ + VK+
Sbjct: 66 THVFHLAAQSSGEISFEDPR----------YDIEI-----NTVSTLELLKWSLNHNVKKL 110
Query: 183 LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF--------SNWASFRPQYMI 234
++ SS +Y ++ P E V P++ + V K SEN+ N R +
Sbjct: 111 IYTSSMNVYGYVNDEPIKETQPVAPESFYA-VGKSASENYIKIFSDLGLNSTILRLFNVY 169
Query: 235 GSGNNKDCEEW-----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
G G N + + F I++ +PV + GS +F + ++ D+ S + ++ +
Sbjct: 170 GPGQNMENLKQGMLSIFLADIMKNKPVLVKGSLERFRDFIYIDDVISAIEKSINFSQKY- 228
Query: 290 SNIFNLVSD-RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPR 348
++FN+ + R + + KL + ++ I P Y
Sbjct: 229 -DVFNICTGIRTTVQEALDKL----------FIAFNLSNYQIIESDGTPKDQFGIYGNIH 277
Query: 349 AAKDILGWRSTTNLPEDLKERFEEYVKI 376
++ +L W+ L ED R +++ KI
Sbjct: 278 KSEKLLDWKYKVKL-EDGLNRLKDFCKI 304
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.131 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,437,634,289
Number of Sequences: 23463169
Number of extensions: 284720134
Number of successful extensions: 821022
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 292
Number of HSP's successfully gapped in prelim test: 2238
Number of HSP's that attempted gapping in prelim test: 817800
Number of HSP's gapped (non-prelim): 3067
length of query: 401
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 256
effective length of database: 8,957,035,862
effective search space: 2293001180672
effective search space used: 2293001180672
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)