BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 015754
         (401 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|3DU7|A Chain A, Tubulin-Colchicine-Phomopsin A: Stathmin-Like Domain
           Complex
 pdb|3DU7|C Chain C, Tubulin-Colchicine-Phomopsin A: Stathmin-Like Domain
           Complex
 pdb|3E22|A Chain A, Tubulin-Colchicine-Soblidotin: Stathmin-Like Domain
           Complex
 pdb|3E22|C Chain C, Tubulin-Colchicine-Soblidotin: Stathmin-Like Domain
           Complex
          Length = 449

 Score =  580 bits (1496), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 264/357 (73%), Positives = 302/357 (84%)

Query: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQ 60
           MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G   D+FNTFFSETG+G+
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 61  HVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
           HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLISGKEDAANN+ARGHYT+G+EI+DL LD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 121 RVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 180
           RVRKLAD CTGLQGFLVF +                  VDYGKKSKL F+IYP+PQVSTA
Sbjct: 121 RVRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRXXXXXXXXXXX 240
           VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERP YTNLNR           
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMSQIVSSITA 240

Query: 241 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSS 300
             RFDGA+NVD+TEFQTNLVPYPRIHF L++YAPVISA KAYHEQ+SV EIT+A FEP++
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHF 357
            M KCDPRHGKYMACCL+YRGDVVPKDVN A+ATIKTKR +QFVDWCPTGFK GI++
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 357


>pdb|4I4T|A Chain A, Crystal Structure Of Tubulin-rb3-ttl-zampanolide Complex
 pdb|4I4T|C Chain C, Crystal Structure Of Tubulin-rb3-ttl-zampanolide Complex
 pdb|4I55|A Chain A, Crystal Structure Of Tubulin-stathmin-ttl Complex
 pdb|4I55|C Chain C, Crystal Structure Of Tubulin-stathmin-ttl Complex
 pdb|4IHJ|A Chain A, Crystal Structure Of Tubulin-stathmin-ttl-adp Complex
 pdb|4IHJ|C Chain C, Crystal Structure Of Tubulin-stathmin-ttl-adp Complex
          Length = 450

 Score =  579 bits (1493), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 262/357 (73%), Positives = 303/357 (84%)

Query: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQ 60
           MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G   D+FNTFFSETG+G+
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 61  HVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
           HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+DL LD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 121 RVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 180
           R+RKLAD CTGLQGFLVF +                  VDYGKKSKL F+IYP+PQVSTA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRXXXXXXXXXXX 240
           VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERP YTNLNR           
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240

Query: 241 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSS 300
             RFDGA+NVD+TEFQTNLVPYPRIHF L++YAPVISA KAYHEQ+SV EIT+A FEP++
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHF 357
            M KCDPRHGKYMACCL+YRGDVVPKDVN A+ATIKTKR++QFVDWCPTGFK GI++
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINY 357


>pdb|4DRX|A Chain A, Gtp-Tubulin In Complex With A Darpin
 pdb|4DRX|C Chain C, Gtp-Tubulin In Complex With A Darpin
          Length = 437

 Score =  579 bits (1492), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 262/357 (73%), Positives = 303/357 (84%)

Query: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQ 60
           MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G   D+FNTFFSETG+G+
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 61  HVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
           HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+DL LD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 121 RVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 180
           R+RKLAD CTGLQGFLVF +                  VDYGKKSKL F+IYP+PQVSTA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRXXXXXXXXXXX 240
           VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERP YTNLNR           
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240

Query: 241 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSS 300
             RFDGA+NVD+TEFQTNLVPYPRIHF L++YAPVISA KAYHEQ+SV EIT+A FEP++
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHF 357
            M KCDPRHGKYMACCL+YRGDVVPKDVN A+ATIKTKR++QFVDWCPTGFK GI++
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINY 357


>pdb|3RYC|A Chain A, Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYC|C Chain C, Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYF|A Chain A, Gtp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYF|C Chain C, Gtp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYH|A Chain A, Gmpcpp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYH|C Chain C, Gmpcpp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYI|A Chain A, Gdp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYI|C Chain C, Gdp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|4F61|A Chain A, Tubulin:stathmin-Like Domain Complex
 pdb|4F61|C Chain C, Tubulin:stathmin-Like Domain Complex
 pdb|4F61|E Chain E, Tubulin:stathmin-Like Domain Complex
 pdb|4F61|G Chain G, Tubulin:stathmin-Like Domain Complex
 pdb|4F6R|A Chain A, Tubulin:stathmin-Like Domain Complex
 pdb|3UT5|A Chain A, Tubulin-colchicine-ustiloxin: Stathmin-like Domain Complex
 pdb|3UT5|C Chain C, Tubulin-colchicine-ustiloxin: Stathmin-like Domain Complex
 pdb|4EB6|A Chain A, Tubulin-vinblastine: Stathmin-like Complex
 pdb|4EB6|C Chain C, Tubulin-vinblastine: Stathmin-like Complex
 pdb|4I50|A Chain A, Crystal Structure Of Tubulin-stathmin-ttl-epothilone A
           Complex
 pdb|4I50|C Chain C, Crystal Structure Of Tubulin-stathmin-ttl-epothilone A
           Complex
 pdb|4IIJ|A Chain A, Crystal Structure Of Tubulin-stathmin-ttl-apo Complex
 pdb|4IIJ|C Chain C, Crystal Structure Of Tubulin-stathmin-ttl-apo Complex
          Length = 451

 Score =  579 bits (1492), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 262/357 (73%), Positives = 303/357 (84%)

Query: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQ 60
           MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G   D+FNTFFSETG+G+
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 61  HVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
           HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+DL LD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 121 RVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 180
           R+RKLAD CTGLQGFLVF +                  VDYGKKSKL F+IYP+PQVSTA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRXXXXXXXXXXX 240
           VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERP YTNLNR           
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240

Query: 241 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSS 300
             RFDGA+NVD+TEFQTNLVPYPRIHF L++YAPVISA KAYHEQ+SV EIT+A FEP++
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHF 357
            M KCDPRHGKYMACCL+YRGDVVPKDVN A+ATIKTKR++QFVDWCPTGFK GI++
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINY 357


>pdb|1Z2B|A Chain A, Tubulin-Colchicine-Vinblastine: Stathmin-Like Domain
           Complex
 pdb|1Z2B|C Chain C, Tubulin-Colchicine-Vinblastine: Stathmin-Like Domain
           Complex
          Length = 448

 Score =  578 bits (1491), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 262/357 (73%), Positives = 303/357 (84%)

Query: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQ 60
           MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G   D+FNTFFSETG+G+
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 61  HVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
           HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+DL LD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 121 RVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 180
           R+RKLAD CTGLQGFLVF +                  VDYGKKSKL F+IYP+PQVSTA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRXXXXXXXXXXX 240
           VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERP YTNLNR           
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 241 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSS 300
             RFDGA+NVD+TEFQTNLVPYPRIHF L++YAPVISA KAYHEQ+SV EIT+A FEP++
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHF 357
            M KCDPRHGKYMACCL+YRGDVVPKDVN A+ATIKTKR++QFVDWCPTGFK GI++
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINY 357


>pdb|3HKB|A Chain A, Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3HKB|C Chain C, Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3HKC|A Chain A, Tubulin-Abt751: Rb3 Stathmin-Like Domain Complex
 pdb|3HKC|C Chain C, Tubulin-Abt751: Rb3 Stathmin-Like Domain Complex
 pdb|3HKD|A Chain A, Tubulin-Tn16 : Rb3 Stathmin-Like Domain Complex
 pdb|3HKD|C Chain C, Tubulin-Tn16 : Rb3 Stathmin-Like Domain Complex
 pdb|3HKE|A Chain A, Tubulin-T138067: Rb3 Stathmin-Like Domain Complex
 pdb|3HKE|C Chain C, Tubulin-T138067: Rb3 Stathmin-Like Domain Complex
 pdb|3N2G|A Chain A, Tubulin-Nsc 613863: Rb3 Stathmin-Like Domain Complex
 pdb|3N2G|C Chain C, Tubulin-Nsc 613863: Rb3 Stathmin-Like Domain Complex
 pdb|3N2K|A Chain A, Tubulin-Nsc 613862: Rb3 Stathmin-Like Domain Complex
 pdb|3N2K|C Chain C, Tubulin-Nsc 613862: Rb3 Stathmin-Like Domain Complex
          Length = 451

 Score =  578 bits (1489), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 262/357 (73%), Positives = 302/357 (84%)

Query: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQ 60
           MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G   D+FNTFFSETG+G+
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 61  HVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
           HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+DL LD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 121 RVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 180
           R+RKLAD CTGLQGFLVF +                  VDYGKKSKL F+IYP+PQVSTA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRXXXXXXXXXXX 240
           VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERP YTNLNR           
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 241 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSS 300
             RFDGA+NVD+TEFQTNLVPYPRIHF L++YAPVISA KAYHEQ+SV EIT+A FEP++
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHF 357
            M KCDPRHGKYMACCL+YRGDVVPKDVN A+ATIKTKR +QFVDWCPTGFK GI++
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 357


>pdb|1SA0|A Chain A, Tubulin-Colchicine: Stathmin-Like Domain Complex
 pdb|1SA0|C Chain C, Tubulin-Colchicine: Stathmin-Like Domain Complex
 pdb|1SA1|A Chain A, Tubulin-Podophyllotoxin: Stathmin-Like Domain Complex
 pdb|1SA1|C Chain C, Tubulin-Podophyllotoxin: Stathmin-Like Domain Complex
 pdb|3EDL|F Chain F, Kinesin13-Microtubule Ring Complex
          Length = 451

 Score =  575 bits (1482), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 261/357 (73%), Positives = 301/357 (84%)

Query: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQ 60
           MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G   D+FNTFFSETG+G+
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 61  HVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
           HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+DL LD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 121 RVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 180
           R+RKLAD CTGLQGF VF +                  VDYGKKSKL F+IYP+PQVSTA
Sbjct: 121 RIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRXXXXXXXXXXX 240
           VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERP YTNLNR           
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 241 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSS 300
             RFDGA+NVD+TEFQTNLVPYPRIHF L++YAPVISA KAYHEQ+SV EIT+A FEP++
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHF 357
            M KCDPRHGKYMACCL+YRGDVVPKDVN A+ATIKTKR +QFVDWCPTGFK GI++
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 357


>pdb|1FFX|A Chain A, Tubulin:stathmin-Like Domain Complex
 pdb|1FFX|C Chain C, Tubulin:stathmin-Like Domain Complex
 pdb|1IA0|A Chain A, Kif1a Head-Microtubule Complex Structure In Atp-Form
 pdb|2HXF|A Chain A, Kif1a Head-Microtubule Complex Structure In Amppnp-Form
 pdb|2HXH|A Chain A, Kif1a Head-Microtubule Complex Structure In Adp-Form
 pdb|2P4N|A Chain A, Human Monomeric Kinesin (1bg2) And Bovine Tubulin (1jff)
           Docked Into The 9-Angstrom Cryo-Em Map Of
           Nucleotide-Free Kinesin Complexed To The Microtubule
          Length = 451

 Score =  573 bits (1478), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 260/357 (72%), Positives = 300/357 (84%)

Query: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQ 60
           MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G   D+FNTFFSETG+G+
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 61  HVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
           HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+DL LD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 121 RVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 180
           R+RKLAD CTGLQGF VF +                  VDYGKKSKL F+IYP+PQVSTA
Sbjct: 121 RIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRXXXXXXXXXXX 240
           VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERP YTNLNR           
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 241 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSS 300
             RFDGA+NVD+TEFQTNLVPYPR HF L++YAPVISA KAYHEQ+SV EIT+A FEP++
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRAHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHF 357
            M KCDPRHGKYMACCL+YRGDVVPKDVN A+ATIKTKR +QFVDWCPTGFK GI++
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 357


>pdb|1TUB|A Chain A, Tubulin Alpha-Beta Dimer, Electron Diffraction
 pdb|1TVK|A Chain A, The Binding Mode Of Epothilone A On A,B-Tubulin By
           Electron Crystallography
          Length = 440

 Score =  572 bits (1475), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 260/357 (72%), Positives = 300/357 (84%)

Query: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQ 60
           MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G   D+FNTFFSETG+G+
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 61  HVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
           HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+DL LD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 121 RVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 180
           R+RKLAD CTGLQGF VF +                  VDYGKKSKL F+IYP+PQVSTA
Sbjct: 121 RIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRXXXXXXXXXXX 240
           VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERP YTNLNR           
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 241 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSS 300
             RFDGA+NVD+TEFQTNLVPYPR HF L++YAPVISA KAYHEQ+SV EIT+A FEP++
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRGHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHF 357
            M KCDPRHGKYMACCL+YRGDVVPKDVN A+ATIKTKR +QFVDWCPTGFK GI++
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 357


>pdb|2XRP|B Chain B, Human Doublecortin N-Dc Repeat (1mjd) And Mammalian
           Tubulin (1jff And 3hke) Docked Into The 8-Angstrom
           Cryo-Em Map Of Doublecortin-Stabilised Microtubules
 pdb|2XRP|D Chain D, Human Doublecortin N-Dc Repeat (1mjd) And Mammalian
           Tubulin (1jff And 3hke) Docked Into The 8-Angstrom
           Cryo-Em Map Of Doublecortin-Stabilised Microtubules
 pdb|2XRP|F Chain F, Human Doublecortin N-Dc Repeat (1mjd) And Mammalian
           Tubulin (1jff And 3hke) Docked Into The 8-Angstrom
           Cryo-Em Map Of Doublecortin-Stabilised Microtubules
 pdb|2XRP|H Chain H, Human Doublecortin N-Dc Repeat (1mjd) And Mammalian
           Tubulin (1jff And 3hke) Docked Into The 8-Angstrom
           Cryo-Em Map Of Doublecortin-Stabilised Microtubules
 pdb|4ATU|B Chain B, Human Doublecortin N-Dc Repeat Plus Linker, And Tubulin
           (2xrp) Docked Into An 8a Cryo-Em Map Of
           Doublecortin-Stabilised Microtubules Reconstructed In
           Absence Of Kinesin
 pdb|4ATU|D Chain D, Human Doublecortin N-Dc Repeat Plus Linker, And Tubulin
           (2xrp) Docked Into An 8a Cryo-Em Map Of
           Doublecortin-Stabilised Microtubules Reconstructed In
           Absence Of Kinesin
 pdb|4ATU|F Chain F, Human Doublecortin N-Dc Repeat Plus Linker, And Tubulin
           (2xrp) Docked Into An 8a Cryo-Em Map Of
           Doublecortin-Stabilised Microtubules Reconstructed In
           Absence Of Kinesin
 pdb|4ATU|H Chain H, Human Doublecortin N-Dc Repeat Plus Linker, And Tubulin
           (2xrp) Docked Into An 8a Cryo-Em Map Of
           Doublecortin-Stabilised Microtubules Reconstructed In
           Absence Of Kinesin
 pdb|4ATX|B Chain B, Rigor Kinesin Motor Domain With An Ordered Neck-Linker,
           Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em
           Map Of Doublecortin-Microtubules Decorated With Kinesin
 pdb|4AQV|A Chain A, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian
           Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom
           Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain
           In The Ampppnp State.
 pdb|4AQW|A Chain A, Model Of Human Kinesin-5 Motor Domain (1ii6, 3hqd) And
           Mammalian Tubulin Heterodimer (1jff) Docked Into The
           9.5- Angstrom Cryo-em Map Of Microtubule-bound Kinesin-5
           Motor Domain In The Rigor State
          Length = 452

 Score =  572 bits (1474), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 260/357 (72%), Positives = 300/357 (84%)

Query: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQ 60
           MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G   D+FNTFFSETG+G+
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 61  HVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
           HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+DL LD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 121 RVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 180
           R+RKLAD CTGLQGF VF +                  VDYGKKSKL F+IYP+PQVSTA
Sbjct: 121 RIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRXXXXXXXXXXX 240
           VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERP YTNLNR           
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 241 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSS 300
             RFDGA+NVD+TEFQTNLVPYPR HF L++YAPVISA KAYHEQ+SV EIT+A FEP++
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRGHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHF 357
            M KCDPRHGKYMACCL+YRGDVVPKDVN A+ATIKTKR +QFVDWCPTGFK GI++
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 357


>pdb|1JFF|A Chain A, Refined Structure Of Alpha-Beta Tubulin From Zinc-Induced
           Sheets Stabilized With Taxol
 pdb|3EDL|A Chain A, Kinesin13-Microtubule Ring Complex
 pdb|3DCO|A Chain A, Drosophila Nod (3dc4) And Bovine Tubulin (1jff) Docked
           Into The 11-Angstrom Cryo-Em Map Of Nucleotide-Free Nod
           Complexed To The Microtubule
 pdb|2WBE|A Chain A, Kinesin-5-Tubulin Complex With Amppnp
 pdb|3IZ0|A Chain A, Human Ndc80 Bonsai Decorated Microtubule
 pdb|4ABO|B Chain B, Mal3 Ch Domain Homology Model And Mammalian Tubulin (2xrp)
           Docked Into The 8.6-Angstrom Cryo-Em Map Of
           Mal3-Gtpgammas-Microtubules
 pdb|4ABO|D Chain D, Mal3 Ch Domain Homology Model And Mammalian Tubulin (2xrp)
           Docked Into The 8.6-Angstrom Cryo-Em Map Of
           Mal3-Gtpgammas-Microtubules
 pdb|4ABO|F Chain F, Mal3 Ch Domain Homology Model And Mammalian Tubulin (2xrp)
           Docked Into The 8.6-Angstrom Cryo-Em Map Of
           Mal3-Gtpgammas-Microtubules
 pdb|4ABO|H Chain H, Mal3 Ch Domain Homology Model And Mammalian Tubulin (2xrp)
           Docked Into The 8.6-Angstrom Cryo-Em Map Of
           Mal3-Gtpgammas-Microtubules
 pdb|3J1T|B Chain B, High Affinity Dynein Microtubule Binding Domain - Tubulin
           Complex
 pdb|3J1U|B Chain B, Low Affinity Dynein Microtubule Binding Domain - Tubulin
           Complex
          Length = 451

 Score =  572 bits (1474), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 260/357 (72%), Positives = 300/357 (84%)

Query: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQ 60
           MRE ISIH+GQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G   D+FNTFFSETG+G+
Sbjct: 1   MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 61  HVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
           HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EI+DL LD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 121 RVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 180
           R+RKLAD CTGLQGF VF +                  VDYGKKSKL F+IYP+PQVSTA
Sbjct: 121 RIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRXXXXXXXXXXX 240
           VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERP YTNLNR           
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 241 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSS 300
             RFDGA+NVD+TEFQTNLVPYPR HF L++YAPVISA KAYHEQ+SV EIT+A FEP++
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRGHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHF 357
            M KCDPRHGKYMACCL+YRGDVVPKDVN A+ATIKTKR +QFVDWCPTGFK GI++
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 357


>pdb|4FFB|A Chain A, A Tog:alphaBETA-Tubulin Complex Structure Reveals
           Conformation-Based Mechanisms For A Microtubule
           Polymerase
          Length = 447

 Score =  469 bits (1206), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 219/356 (61%), Positives = 264/356 (74%), Gaps = 1/356 (0%)

Query: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSV-GACHDAFNTFFSETGSG 59
           MRE+ISI++GQAG Q+GN+CWELY LEHGI PDG +    S      + F+TFF ETG G
Sbjct: 1   MREVISINVGQAGCQIGNACWELYSLEHGIKPDGHLEDGLSKPKGGEEGFSTFFHETGYG 60

Query: 60  QHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCL 119
           + VPRA++VDLEP+VIDEVR G Y+ LFHPEQLISGKEDAANN+ARGHYTVGREI+   L
Sbjct: 61  KFVPRAIYVDLEPNVIDEVRNGPYKDLFHPEQLISGKEDAANNYARGHYTVGREILGDVL 120

Query: 120 DRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVST 179
           DR+RKLAD C GLQGFL   ++                  +YGKKSKL F +YP+PQVST
Sbjct: 121 DRIRKLADQCDGLQGFLFTHSLGGGTGSGLGSLLLEELSAEYGKKSKLEFAVYPAPQVST 180

Query: 180 AVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRXXXXXXXXXX 239
           +VVEPYN+VL+TH+ LEH D   ++DNEAIYD+C+R+LDI RP++ NLN           
Sbjct: 181 SVVEPYNTVLTTHTTLEHADCTFMVDNEAIYDMCKRNLDIPRPSFANLNNLIAQVVSSVT 240

Query: 240 XXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPS 299
              RFDG++NVD+ EFQTNLVPYPRIHF L SY+PV+S +KA+HE  SV EIT+A FEP 
Sbjct: 241 ASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVSYSPVLSKSKAFHESNSVSEITNACFEPG 300

Query: 300 SMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGI 355
           + M KCDPR GKYMA CL+YRGDVV +DV  AV  +K K+ VQ VDWCPTGFK GI
Sbjct: 301 NQMVKCDPRDGKYMATCLLYRGDVVTRDVQRAVEQVKNKKTVQLVDWCPTGFKIGI 356


>pdb|1FFX|B Chain B, Tubulin:stathmin-Like Domain Complex
 pdb|1FFX|D Chain D, Tubulin:stathmin-Like Domain Complex
 pdb|1JFF|B Chain B, Refined Structure Of Alpha-Beta Tubulin From Zinc-Induced
           Sheets Stabilized With Taxol
 pdb|1IA0|B Chain B, Kif1a Head-Microtubule Complex Structure In Atp-Form
 pdb|1SA0|B Chain B, Tubulin-Colchicine: Stathmin-Like Domain Complex
 pdb|1SA0|D Chain D, Tubulin-Colchicine: Stathmin-Like Domain Complex
 pdb|1SA1|B Chain B, Tubulin-Podophyllotoxin: Stathmin-Like Domain Complex
 pdb|1SA1|D Chain D, Tubulin-Podophyllotoxin: Stathmin-Like Domain Complex
 pdb|2HXF|B Chain B, Kif1a Head-Microtubule Complex Structure In Amppnp-Form
 pdb|2HXH|B Chain B, Kif1a Head-Microtubule Complex Structure In Adp-Form
 pdb|2P4N|B Chain B, Human Monomeric Kinesin (1bg2) And Bovine Tubulin (1jff)
           Docked Into The 9-Angstrom Cryo-Em Map Of
           Nucleotide-Free Kinesin Complexed To The Microtubule
 pdb|3EDL|B Chain B, Kinesin13-Microtubule Ring Complex
 pdb|3EDL|G Chain G, Kinesin13-Microtubule Ring Complex
 pdb|3DCO|B Chain B, Drosophila Nod (3dc4) And Bovine Tubulin (1jff) Docked
           Into The 11-Angstrom Cryo-Em Map Of Nucleotide-Free Nod
           Complexed To The Microtubule
 pdb|2WBE|B Chain B, Kinesin-5-Tubulin Complex With Amppnp
 pdb|3IZ0|B Chain B, Human Ndc80 Bonsai Decorated Microtubule
 pdb|4ABO|A Chain A, Mal3 Ch Domain Homology Model And Mammalian Tubulin (2xrp)
           Docked Into The 8.6-Angstrom Cryo-Em Map Of
           Mal3-Gtpgammas-Microtubules
 pdb|4ABO|C Chain C, Mal3 Ch Domain Homology Model And Mammalian Tubulin (2xrp)
           Docked Into The 8.6-Angstrom Cryo-Em Map Of
           Mal3-Gtpgammas-Microtubules
 pdb|4ABO|E Chain E, Mal3 Ch Domain Homology Model And Mammalian Tubulin (2xrp)
           Docked Into The 8.6-Angstrom Cryo-Em Map Of
           Mal3-Gtpgammas-Microtubules
 pdb|4ABO|G Chain G, Mal3 Ch Domain Homology Model And Mammalian Tubulin (2xrp)
           Docked Into The 8.6-Angstrom Cryo-Em Map Of
           Mal3-Gtpgammas-Microtubules
          Length = 445

 Score =  291 bits (746), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 138/369 (37%), Positives = 210/369 (56%), Gaps = 4/369 (1%)

Query: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQ 60
           MREI+ I  GQ G Q+G   WE+   EHGI P G+   D+ +    +  N +++E    +
Sbjct: 1   MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQL--ERINVYYNEAAGNK 58

Query: 61  HVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
           +VPRA+ VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GHYT G E+VD  LD
Sbjct: 59  YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118

Query: 121 RVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 180
            VRK +++C  LQGF +  ++                  +Y  +    F++ PSP+VS  
Sbjct: 119 VVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178

Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRXXXXXXXXXXX 240
           VVEPYN+ LS H L+E+TD    +DNEA+YDIC R+L +  P Y +LN            
Sbjct: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238

Query: 241 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSS 300
             RF G +N D+ +   N+VP+PR+HF +  +AP+ S     +  ++VPE+T  +F+  +
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKN 298

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHFCNI 360
           MMA CDPRHG+Y+    ++RG +  K+V+  +  ++ K +  FV+W P   K  +  C+I
Sbjct: 299 MMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAV--CDI 356

Query: 361 IKHSFLMVA 369
                 M A
Sbjct: 357 PPRGLKMSA 365


>pdb|2XRP|A Chain A, Human Doublecortin N-Dc Repeat (1mjd) And Mammalian
           Tubulin (1jff And 3hke) Docked Into The 8-Angstrom
           Cryo-Em Map Of Doublecortin-Stabilised Microtubules
 pdb|2XRP|C Chain C, Human Doublecortin N-Dc Repeat (1mjd) And Mammalian
           Tubulin (1jff And 3hke) Docked Into The 8-Angstrom
           Cryo-Em Map Of Doublecortin-Stabilised Microtubules
 pdb|2XRP|E Chain E, Human Doublecortin N-Dc Repeat (1mjd) And Mammalian
           Tubulin (1jff And 3hke) Docked Into The 8-Angstrom
           Cryo-Em Map Of Doublecortin-Stabilised Microtubules
 pdb|2XRP|G Chain G, Human Doublecortin N-Dc Repeat (1mjd) And Mammalian
           Tubulin (1jff And 3hke) Docked Into The 8-Angstrom
           Cryo-Em Map Of Doublecortin-Stabilised Microtubules
 pdb|4ATU|A Chain A, Human Doublecortin N-Dc Repeat Plus Linker, And Tubulin
           (2xrp) Docked Into An 8a Cryo-Em Map Of
           Doublecortin-Stabilised Microtubules Reconstructed In
           Absence Of Kinesin
 pdb|4ATU|C Chain C, Human Doublecortin N-Dc Repeat Plus Linker, And Tubulin
           (2xrp) Docked Into An 8a Cryo-Em Map Of
           Doublecortin-Stabilised Microtubules Reconstructed In
           Absence Of Kinesin
 pdb|4ATU|E Chain E, Human Doublecortin N-Dc Repeat Plus Linker, And Tubulin
           (2xrp) Docked Into An 8a Cryo-Em Map Of
           Doublecortin-Stabilised Microtubules Reconstructed In
           Absence Of Kinesin
 pdb|4ATU|G Chain G, Human Doublecortin N-Dc Repeat Plus Linker, And Tubulin
           (2xrp) Docked Into An 8a Cryo-Em Map Of
           Doublecortin-Stabilised Microtubules Reconstructed In
           Absence Of Kinesin
 pdb|4ATX|A Chain A, Rigor Kinesin Motor Domain With An Ordered Neck-Linker,
           Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em
           Map Of Doublecortin-Microtubules Decorated With Kinesin
 pdb|4AQV|B Chain B, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian
           Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom
           Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain
           In The Ampppnp State.
 pdb|4AQW|B Chain B, Model Of Human Kinesin-5 Motor Domain (1ii6, 3hqd) And
           Mammalian Tubulin Heterodimer (1jff) Docked Into The
           9.5- Angstrom Cryo-em Map Of Microtubule-bound Kinesin-5
           Motor Domain In The Rigor State
          Length = 445

 Score =  291 bits (746), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 138/369 (37%), Positives = 210/369 (56%), Gaps = 4/369 (1%)

Query: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQ 60
           MREI+ I  GQ G Q+G   WE+   EHGI P G+   D+ +    +  N +++E    +
Sbjct: 1   MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQL--ERINVYYNEAAGNK 58

Query: 61  HVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
           +VPRA+ VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GHYT G E+VD  LD
Sbjct: 59  YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118

Query: 121 RVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 180
            VRK +++C  LQGF +  ++                  +Y  +    F++ PSP+VS  
Sbjct: 119 VVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178

Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRXXXXXXXXXXX 240
           VVEPYN+ LS H L+E+TD    +DNEA+YDIC R+L +  P Y +LN            
Sbjct: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238

Query: 241 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSS 300
             RF G +N D+ +   N+VP+PR+HF +  +AP+ S     +  ++VPE+T  +F+  +
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKN 298

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHFCNI 360
           MMA CDPRHG+Y+    ++RG +  K+V+  +  ++ K +  FV+W P   K  +  C+I
Sbjct: 299 MMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAV--CDI 356

Query: 361 IKHSFLMVA 369
                 M A
Sbjct: 357 PPRGLKMSA 365


>pdb|4F61|B Chain B, Tubulin:stathmin-Like Domain Complex
 pdb|4F61|D Chain D, Tubulin:stathmin-Like Domain Complex
 pdb|4F61|F Chain F, Tubulin:stathmin-Like Domain Complex
 pdb|4F61|H Chain H, Tubulin:stathmin-Like Domain Complex
          Length = 445

 Score =  291 bits (746), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 138/369 (37%), Positives = 210/369 (56%), Gaps = 4/369 (1%)

Query: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQ 60
           MREI+ I  GQ G Q+G   WE+   EHGI P G+   D+ +    +  N +++E    +
Sbjct: 1   MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQL--ERINVYYNEATGNK 58

Query: 61  HVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
           +VPRA+ VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GHYT G E+VD  LD
Sbjct: 59  YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118

Query: 121 RVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 180
            VRK +++C  LQGF +  ++                  +Y  +    F++ PSP+VS  
Sbjct: 119 VVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDT 178

Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRXXXXXXXXXXX 240
           VVEPYN+ LS H L+E+TD    +DNEA+YDIC R+L +  P Y +LN            
Sbjct: 179 VVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238

Query: 241 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSS 300
             RF G +N D+ +   N+VP+PR+HF +  +AP+ S     +  ++VPE+T  +F+  +
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKN 298

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHFCNI 360
           MMA CDPRHG+Y+    ++RG +  K+V+  +  ++ K +  FV+W P   K  +  C+I
Sbjct: 299 MMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAV--CDI 356

Query: 361 IKHSFLMVA 369
                 M A
Sbjct: 357 PPRGLKMSA 365


>pdb|4DRX|B Chain B, Gtp-Tubulin In Complex With A Darpin
 pdb|4DRX|D Chain D, Gtp-Tubulin In Complex With A Darpin
          Length = 431

 Score =  291 bits (746), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 138/369 (37%), Positives = 210/369 (56%), Gaps = 4/369 (1%)

Query: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQ 60
           MREI+ I  GQ G Q+G   WE+   EHGI P G+   D+ +    +  N +++E    +
Sbjct: 1   MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQL--ERINVYYNEATGNK 58

Query: 61  HVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
           +VPRA+ VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GHYT G E+VD  LD
Sbjct: 59  YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118

Query: 121 RVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 180
            VRK +++C  LQGF +  ++                  +Y  +    F++ PSP+VS  
Sbjct: 119 VVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDT 178

Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRXXXXXXXXXXX 240
           VVEPYN+ LS H L+E+TD    +DNEA+YDIC R+L +  P Y +LN            
Sbjct: 179 VVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238

Query: 241 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSS 300
             RF G +N D+ +   N+VP+PR+HF +  +AP+ S     +  ++VPE+T  +F+  +
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKN 298

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHFCNI 360
           MMA CDPRHG+Y+    ++RG +  K+V+  +  ++ K +  FV+W P   K  +  C+I
Sbjct: 299 MMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAV--CDI 356

Query: 361 IKHSFLMVA 369
                 M A
Sbjct: 357 PPRGLKMSA 365


>pdb|1TUB|B Chain B, Tubulin Alpha-Beta Dimer, Electron Diffraction
 pdb|1TVK|B Chain B, The Binding Mode Of Epothilone A On A,B-Tubulin By
           Electron Crystallography
 pdb|3J1T|C Chain C, High Affinity Dynein Microtubule Binding Domain - Tubulin
           Complex
 pdb|3J1U|C Chain C, Low Affinity Dynein Microtubule Binding Domain - Tubulin
           Complex
          Length = 427

 Score =  291 bits (746), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 138/369 (37%), Positives = 210/369 (56%), Gaps = 4/369 (1%)

Query: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQ 60
           MREI+ I  GQ G Q+G   WE+   EHGI P G+   D+ +    +  N +++E    +
Sbjct: 1   MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQL--ERINVYYNEAAGNK 58

Query: 61  HVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
           +VPRA+ VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GHYT G E+VD  LD
Sbjct: 59  YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118

Query: 121 RVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 180
            VRK +++C  LQGF +  ++                  +Y  +    F++ PSP+VS  
Sbjct: 119 VVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178

Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRXXXXXXXXXXX 240
           VVEPYN+ LS H L+E+TD    +DNEA+YDIC R+L +  P Y +LN            
Sbjct: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238

Query: 241 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSS 300
             RF G +N D+ +   N+VP+PR+HF +  +AP+ S     +  ++VPE+T  +F+  +
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKN 298

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHFCNI 360
           MMA CDPRHG+Y+    ++RG +  K+V+  +  ++ K +  FV+W P   K  +  C+I
Sbjct: 299 MMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAV--CDI 356

Query: 361 IKHSFLMVA 369
                 M A
Sbjct: 357 PPRGLKMSA 365


>pdb|4I4T|B Chain B, Crystal Structure Of Tubulin-rb3-ttl-zampanolide Complex
 pdb|4I4T|D Chain D, Crystal Structure Of Tubulin-rb3-ttl-zampanolide Complex
 pdb|4I50|B Chain B, Crystal Structure Of Tubulin-stathmin-ttl-epothilone A
           Complex
 pdb|4I50|D Chain D, Crystal Structure Of Tubulin-stathmin-ttl-epothilone A
           Complex
 pdb|4I55|B Chain B, Crystal Structure Of Tubulin-stathmin-ttl Complex
 pdb|4I55|D Chain D, Crystal Structure Of Tubulin-stathmin-ttl Complex
 pdb|4IIJ|B Chain B, Crystal Structure Of Tubulin-stathmin-ttl-apo Complex
 pdb|4IIJ|D Chain D, Crystal Structure Of Tubulin-stathmin-ttl-apo Complex
 pdb|4IHJ|B Chain B, Crystal Structure Of Tubulin-stathmin-ttl-adp Complex
 pdb|4IHJ|D Chain D, Crystal Structure Of Tubulin-stathmin-ttl-adp Complex
          Length = 445

 Score =  291 bits (745), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 138/369 (37%), Positives = 210/369 (56%), Gaps = 4/369 (1%)

Query: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQ 60
           MREI+ I  GQ G Q+G   WE+   EHGI P G+   D+ +    +  N +++E    +
Sbjct: 1   MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQL--ERINVYYNEATGNK 58

Query: 61  HVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
           +VPRA+ VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GHYT G E+VD  LD
Sbjct: 59  YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118

Query: 121 RVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 180
            VRK +++C  LQGF +  ++                  +Y  +    F++ PSP+VS  
Sbjct: 119 VVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDT 178

Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRXXXXXXXXXXX 240
           VVEPYN+ LS H L+E+TD    +DNEA+YDIC R+L +  P Y +LN            
Sbjct: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238

Query: 241 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSS 300
             RF G +N D+ +   N+VP+PR+HF +  +AP+ S     +  ++VPE+T  +F+  +
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKN 298

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHFCNI 360
           MMA CDPRHG+Y+    ++RG +  K+V+  +  ++ K +  FV+W P   K  +  C+I
Sbjct: 299 MMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAV--CDI 356

Query: 361 IKHSFLMVA 369
                 M A
Sbjct: 357 PPRGLKMSA 365


>pdb|3DU7|B Chain B, Tubulin-Colchicine-Phomopsin A: Stathmin-Like Domain
           Complex
 pdb|3DU7|D Chain D, Tubulin-Colchicine-Phomopsin A: Stathmin-Like Domain
           Complex
 pdb|3E22|B Chain B, Tubulin-Colchicine-Soblidotin: Stathmin-Like Domain
           Complex
 pdb|3E22|D Chain D, Tubulin-Colchicine-Soblidotin: Stathmin-Like Domain
           Complex
 pdb|3HKB|B Chain B, Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3HKB|D Chain D, Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3HKC|B Chain B, Tubulin-Abt751: Rb3 Stathmin-Like Domain Complex
 pdb|3HKC|D Chain D, Tubulin-Abt751: Rb3 Stathmin-Like Domain Complex
 pdb|3HKD|B Chain B, Tubulin-Tn16 : Rb3 Stathmin-Like Domain Complex
 pdb|3HKD|D Chain D, Tubulin-Tn16 : Rb3 Stathmin-Like Domain Complex
 pdb|3HKE|B Chain B, Tubulin-T138067: Rb3 Stathmin-Like Domain Complex
 pdb|3HKE|D Chain D, Tubulin-T138067: Rb3 Stathmin-Like Domain Complex
 pdb|3N2G|B Chain B, Tubulin-Nsc 613863: Rb3 Stathmin-Like Domain Complex
 pdb|3N2G|D Chain D, Tubulin-Nsc 613863: Rb3 Stathmin-Like Domain Complex
 pdb|3N2K|B Chain B, Tubulin-Nsc 613862: Rb3 Stathmin-Like Domain Complex
 pdb|3N2K|D Chain D, Tubulin-Nsc 613862: Rb3 Stathmin-Like Domain Complex
          Length = 445

 Score =  291 bits (745), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 138/369 (37%), Positives = 210/369 (56%), Gaps = 4/369 (1%)

Query: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQ 60
           MREI+ I  GQ G Q+G   WE+   EHGI P G+   D+ +    +  N +++E    +
Sbjct: 1   MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQL--ERINVYYNEATGNK 58

Query: 61  HVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
           +VPRA+ VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GHYT G E+VD  LD
Sbjct: 59  YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118

Query: 121 RVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 180
            VRK +++C  LQGF +  ++                  +Y  +    F++ PSP+VS  
Sbjct: 119 VVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDT 178

Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRXXXXXXXXXXX 240
           VVEPYN+ LS H L+E+TD    +DNEA+YDIC R+L +  P Y +LN            
Sbjct: 179 VVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238

Query: 241 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSS 300
             RF G +N D+ +   N+VP+PR+HF +  +AP+ S     +  ++VPE+T  +F+  +
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKN 298

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHFCNI 360
           MMA CDPRHG+Y+    ++RG +  K+V+  +  ++ K +  FV+W P   K  +  C+I
Sbjct: 299 MMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAV--CDI 356

Query: 361 IKHSFLMVA 369
                 M A
Sbjct: 357 PPRGLKMSA 365


>pdb|1Z2B|B Chain B, Tubulin-Colchicine-Vinblastine: Stathmin-Like Domain
           Complex
 pdb|1Z2B|D Chain D, Tubulin-Colchicine-Vinblastine: Stathmin-Like Domain
           Complex
          Length = 445

 Score =  291 bits (745), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 138/369 (37%), Positives = 210/369 (56%), Gaps = 4/369 (1%)

Query: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQ 60
           MREI+ I  GQ G Q+G   WE+   EHGI P G+   D+ +    +  N +++E    +
Sbjct: 1   MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQL--ERINVYYNEATGNK 58

Query: 61  HVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
           +VPRA+ VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GHYT G E+VD  LD
Sbjct: 59  YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118

Query: 121 RVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 180
            VRK +++C  LQGF +  ++                  +Y  +    F++ PSP+VS  
Sbjct: 119 VVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178

Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRXXXXXXXXXXX 240
           VVEPYN+ LS H L+E+TD    +DNEA+YDIC R+L +  P Y +LN            
Sbjct: 179 VVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238

Query: 241 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSS 300
             RF G +N D+ +   N+VP+PR+HF +  +AP+ S     +  ++VPE+T  +F+  +
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKN 298

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHFCNI 360
           MMA CDPRHG+Y+    ++RG +  K+V+  +  ++ K +  FV+W P   K  +  C+I
Sbjct: 299 MMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAV--CDI 356

Query: 361 IKHSFLMVA 369
                 M A
Sbjct: 357 PPRGLKMSA 365


>pdb|3RYC|B Chain B, Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYC|D Chain D, Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYF|B Chain B, Gtp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYF|D Chain D, Gtp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYH|B Chain B, Gmpcpp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYH|D Chain D, Gmpcpp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYI|B Chain B, Gdp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYI|D Chain D, Gdp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|4F6R|B Chain B, Tubulin:stathmin-Like Domain Complex
 pdb|3UT5|B Chain B, Tubulin-colchicine-ustiloxin: Stathmin-like Domain Complex
 pdb|3UT5|D Chain D, Tubulin-colchicine-ustiloxin: Stathmin-like Domain Complex
 pdb|4EB6|B Chain B, Tubulin-vinblastine: Stathmin-like Complex
 pdb|4EB6|D Chain D, Tubulin-vinblastine: Stathmin-like Complex
          Length = 445

 Score =  291 bits (745), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 138/367 (37%), Positives = 209/367 (56%), Gaps = 4/367 (1%)

Query: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQ 60
           MREI+ I  GQ G Q+G   WE+   EHGI P G+   D+ +    +  N +++E    +
Sbjct: 1   MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQL--ERINVYYNEATGNK 58

Query: 61  HVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
           +VPRA+ VDLEP  +D VR+G + Q+F P+  + G+  A NN+A+GHYT G E+VD  LD
Sbjct: 59  YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118

Query: 121 RVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 180
            VRK +++C  LQGF +  ++                  +Y  +    F++ PSP+VS  
Sbjct: 119 VVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDT 178

Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRXXXXXXXXXXX 240
           VVEPYN+ LS H L+E+TD    +DNEA+YDIC R+L +  P Y +LN            
Sbjct: 179 VVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238

Query: 241 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSS 300
             RF G +N D+ +   N+VP+PR+HF +  +AP+ S     +  ++VPE+T  +F+  +
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKN 298

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHFCNI 360
           MMA CDPRHG+Y+    ++RG +  K+V+  +  I+ K +  FV+W P   K  +  C+I
Sbjct: 299 MMAACDPRHGRYLTVATIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV--CDI 356

Query: 361 IKHSFLM 367
                 M
Sbjct: 357 PPRGLKM 363


>pdb|4FFB|B Chain B, A Tog:alphaBETA-Tubulin Complex Structure Reveals
           Conformation-Based Mechanisms For A Microtubule
           Polymerase
          Length = 463

 Score =  275 bits (704), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 132/369 (35%), Positives = 203/369 (55%), Gaps = 4/369 (1%)

Query: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQ 60
           MREII I  GQ G Q+G + WE  C EHG+  +GT      +    +  N +F+E  SG+
Sbjct: 1   MREIIHISTGQCGNQIGAAFWETICGEHGLDFNGTYHGHDDIQ--KERLNVYFNEASSGK 58

Query: 61  HVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
            VPR++ VDLEP  ID VR  +   LF P+  I G+  A N +A+GHYT G E+VD  +D
Sbjct: 59  WVPRSINVDLEPGTIDAVRNSAIGNLFRPDNYIFGQSSAGNVWAKGHYTEGAELVDSVMD 118

Query: 121 RVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 180
            +R+ A+ C  LQGF +  ++                  ++  +    F++ PSP+ S  
Sbjct: 119 VIRREAEGCDSLQGFQITHSLGGGTGSGMGTLLISKIREEFPDRMMATFSVLPSPKRSDT 178

Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRXXXXXXXXXXX 240
            VEPYN+ LS H L+EH+D    +DNEA+YDIC+R+L + +P+Y +LN            
Sbjct: 179 RVEPYNATLSVHQLVEHSDETFCIDNEALYDICQRTLKLNQPSYGDLNNLVSSVMSGVTT 238

Query: 241 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSS 300
             R+ G +N D+ +   NLVP+PR+HF +  YAP+ +        ++VPE+T  +F+  +
Sbjct: 239 SLRYPGQLNSDLRKLAVNLVPFPRLHFFMVGYAPLTAIGSQSFRSLTVPELTQQMFDAKN 298

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHFCNI 360
           MMA  DPR+G+Y+     +RG V  K+V   +  +++K +  FV+W P   +  +  C++
Sbjct: 299 MMAAADPRNGRYLTVAAFFRGKVSVKEVEDEMHKVQSKNSDYFVEWIPNNVQTAV--CSV 356

Query: 361 IKHSFLMVA 369
                 M A
Sbjct: 357 APQGLDMAA 365


>pdb|2BTQ|B Chain B, Structure Of Btubab Heterodimer From Prosthecobacter
           Dejongeii
          Length = 426

 Score =  241 bits (614), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 125/356 (35%), Positives = 193/356 (54%), Gaps = 6/356 (1%)

Query: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQ 60
           +REI+SIH+GQ G Q+ +S W L   EHG+   GT+  + S  A +     FF +   G+
Sbjct: 1   VREILSIHVGQCGNQIADSFWRLALREHGLTEAGTL-KEGSNAAANSNMEVFFHKVRDGK 59

Query: 61  HVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
           +VPRAV VDLEP VI  +  G   QLF    ++     AANN+ARG+   G +++D  ++
Sbjct: 60  YVPRAVLVDLEPGVIARIEGGDMSQLFDESSIVRKIPGAANNWARGYNVEGEKVIDQIMN 119

Query: 121 RVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 180
            +    +   GLQGFL+  ++                   Y KK    F++ PSP +S +
Sbjct: 120 VIDSAVEKTKGLQGFLMTHSIGGGSGSGLGSLILERLRQAYPKKRIFTFSVVPSPLISDS 179

Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRXXXXXXXXXXX 240
            VEPYN++L+   +L++ D AVLLDNEA++ I +  L+   PNY +LN            
Sbjct: 180 AVEPYNAILTLQRILDNADGAVLLDNEALFRIAKAKLN-RSPNYMDLNNIIALIVSSVTA 238

Query: 241 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSS 300
             RF G +N D++EF TNLVP+P  HF+ +S+AP+  A +    + + P++    F   +
Sbjct: 239 SLRFPGKLNTDLSEFVTNLVPFPGNHFLTASFAPMRGAGQEGQVRTNFPDLARETFAQDN 298

Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPT--GFKCG 354
             A  D + G Y+A   ++RGDV  KDV+  +ATI  ++++ +  + P   G K G
Sbjct: 299 FTAAIDWQQGVYLAASALFRGDVKAKDVDENMATI--RKSLNYASYMPASGGLKLG 352


>pdb|2BTO|A Chain A, Structure Of Btuba From Prosthecobacter Dejongeii
 pdb|2BTO|B Chain B, Structure Of Btuba From Prosthecobacter Dejongeii
 pdb|2BTQ|A Chain A, Structure Of Btubab Heterodimer From Prosthecobacter
           Dejongeii
          Length = 473

 Score =  232 bits (592), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 126/357 (35%), Positives = 194/357 (54%), Gaps = 13/357 (3%)

Query: 5   ISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVG-ACHDAFNTFFS---ETGSGQ 60
           I + IGQAG Q+  S W+  CLEHGI P   +   T+ G A    +++FFS   E+ SG 
Sbjct: 7   IVVSIGQAGNQIAASFWKTVCLEHGIDP---LTGQTAPGVAPRGNWSSFFSKLGESSSGS 63

Query: 61  HVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
           +VPRA+ VDLEPSVID V+  S   LF+P  LIS  E A  NFA G+   GRE++   + 
Sbjct: 64  YVPRAIMVDLEPSVIDNVKATS-GSLFNPANLISRTEGAGGNFAVGYLGAGREVLPEVMS 122

Query: 121 RVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 180
           R+    D C  + G +V  A+                   YG+   L   + PSPQVS+ 
Sbjct: 123 RLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIESLKEKYGEIPVLSCAVLPSPQVSSV 182

Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRXXXXXXXXXXX 240
           V EPYN+V + ++L    D  ++ DNEA++D+  R  +IE P   +LN            
Sbjct: 183 VTEPYNTVFALNTLRRSADACLIFDNEALFDLAHRKWNIESPTVDDLNLLITEALAGITA 242

Query: 241 XXRFDGAINVDIT--EFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEP 298
             RF G + V+I+  E  TNLVP P +HF++ ++AP+    ++  E++ + E+  ++F+ 
Sbjct: 243 SMRFSGFLTVEISLRELLTNLVPQPSLHFLMCAFAPLTPPDRSKFEELGIEEMIKSLFDN 302

Query: 299 SSMMAKCDPRHGKYMACCLMYRGDVVPKDV-NTAVATIKTKRAVQFVDWCPTGFKCG 354
            S+ A C P  G++++  ++YRG +  K + + A+A ++ K  + +  W PT FK G
Sbjct: 303 GSVFAACSPMEGRFLSTAVLYRGIMEDKPLADAALAAMREKLPLTY--WIPTAFKIG 357


>pdb|3CB2|A Chain A, Crystal Structure Of Human Gamma-Tubulin Bound To Gdp
 pdb|3CB2|B Chain B, Crystal Structure Of Human Gamma-Tubulin Bound To Gdp
          Length = 475

 Score =  172 bits (437), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 194/396 (48%), Gaps = 17/396 (4%)

Query: 2   REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQH 61
           REII++ +GQ G Q+G   W+  C EHGI P+  +    + G   D  + FF +     +
Sbjct: 3   REIITLQLGQCGNQIGFEFWKQLCAEHGISPEAIVEEFATEGT--DRKDVFFYQADDEHY 60

Query: 62  VPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKED--AANNFARGHYTVGREIVDLCL 119
           +PRAV +DLEP VI  +    Y +L++PE +   +    A NN+A G ++ G +I +   
Sbjct: 61  IPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIF 119

Query: 120 DRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSP-QVS 178
           D + + AD    L+GF++  ++                   Y KK    ++++P+  ++S
Sbjct: 120 DIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMS 179

Query: 179 TAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRXXXXXXXXX 238
             VV+PYNS+L+   L ++ D  V+LDN A+  I    L I+ P+++ +N+         
Sbjct: 180 DVVVQPYNSLLTLKRLTQNADCLVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSAS 239

Query: 239 XXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVIS-AAKAYHEQISVPEITSAVFE 297
               R+ G +N D+     +L+P PR+HF+++ Y P+ +  + A   + +V ++   + +
Sbjct: 240 TTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQ 299

Query: 298 PSSMMAKCDPRHGK---YMACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCG 354
           P ++M            Y+A   + +G+V P  V+ ++  I+ ++   F+ W P   +  
Sbjct: 300 PKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVA 359

Query: 355 IHFCNIIKHSFLMVAKCMHGVQRIMTMNLHFDSSVF 390
           +      K  +L  A   H V  +M  N    SS+F
Sbjct: 360 LSR----KSPYLPSA---HRVSGLMMANHTSISSLF 388


>pdb|1Z5V|A Chain A, Crystal Structure Of Human Gamma-Tubulin Bound To
           Gtpgammas
 pdb|1Z5W|A Chain A, Crystal Structure Of Gamma-Tubulin Bound To Gtp
          Length = 474

 Score =  172 bits (436), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 194/396 (48%), Gaps = 17/396 (4%)

Query: 2   REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQH 61
           REII++ +GQ G Q+G   W+  C EHGI P+  +    + G   D  + FF +     +
Sbjct: 3   REIITLQLGQCGNQIGFEFWKQLCAEHGISPEAIVEEFATEGT--DRKDVFFYQADDEHY 60

Query: 62  VPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKED--AANNFARGHYTVGREIVDLCL 119
           +PRAV +DLEP VI  +    Y +L++PE +   +    A NN+A G ++ G +I +   
Sbjct: 61  IPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIF 119

Query: 120 DRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSP-QVS 178
           D + + AD    L+GF++  ++                   Y KK    ++++P+  ++S
Sbjct: 120 DIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMS 179

Query: 179 TAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRXXXXXXXXX 238
             VV+PYNS+L+   L ++ D  V+LDN A+  I    L I+ P+++ +N+         
Sbjct: 180 DVVVQPYNSLLTLKRLTQNADCLVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSAS 239

Query: 239 XXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVIS-AAKAYHEQISVPEITSAVFE 297
               R+ G +N D+     +L+P PR+HF+++ Y P+ +  + A   + +V ++   + +
Sbjct: 240 TTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQ 299

Query: 298 PSSMMAKCDPRHGK---YMACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCG 354
           P ++M            Y+A   + +G+V P  V+ ++  I+ ++   F+ W P   +  
Sbjct: 300 PKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVA 359

Query: 355 IHFCNIIKHSFLMVAKCMHGVQRIMTMNLHFDSSVF 390
           +      K  +L  A   H V  +M  N    SS+F
Sbjct: 360 LSR----KSPYLPSA---HRVSGLMMANHTSISSLF 388


>pdb|2IVF|C Chain C, Ethylbenzene Dehydrogenase From Aromatoleum Aromaticum
          Length = 214

 Score = 29.3 bits (64), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 12/41 (29%), Positives = 22/41 (53%)

Query: 169 FTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAI 209
           F ++P+P V    V P+ ++   H +++  DVA L +   I
Sbjct: 29  FEMFPTPLVMVKEVSPFLALSEGHGVIKRLDVAALHNGSMI 69


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.323    0.137    0.424 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,860,543
Number of Sequences: 62578
Number of extensions: 415837
Number of successful extensions: 787
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 714
Number of HSP's gapped (non-prelim): 27
length of query: 401
length of database: 14,973,337
effective HSP length: 101
effective length of query: 300
effective length of database: 8,652,959
effective search space: 2595887700
effective search space used: 2595887700
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 52 (24.6 bits)