Query 015754
Match_columns 401
No_of_seqs 211 out of 1385
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 18:06:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015754.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015754hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ryc_A Tubulin alpha chain; al 100.0 2E-114 5E-119 879.0 22.5 392 1-400 1-392 (451)
2 3ryc_B Tubulin beta chain; alp 100.0 4E-112 1E-116 859.7 20.6 382 1-400 1-382 (445)
3 3cb2_A Gamma-1-tubulin, tubuli 100.0 3E-101 9E-106 789.6 25.4 384 1-400 2-392 (475)
4 2btq_B Tubulin btubb; structur 100.0 3E-99 1E-103 768.0 19.2 380 1-400 1-382 (426)
5 2bto_A Tubulin btuba; bacteria 100.0 8.4E-97 3E-101 757.3 21.8 378 1-400 3-387 (473)
6 1w5f_A Cell division protein F 100.0 1.1E-47 3.7E-52 379.7 12.5 288 1-362 21-315 (353)
7 2vap_A FTSZ, cell division pro 100.0 3.9E-47 1.3E-51 376.6 12.7 284 3-362 39-328 (364)
8 1ofu_A FTSZ, cell division pro 100.0 2.1E-46 7.2E-51 367.0 14.9 286 3-362 13-304 (320)
9 1rq2_A Cell division protein F 100.0 1.6E-46 5.4E-51 374.0 11.7 287 2-362 12-303 (382)
10 2r75_1 Cell division protein F 100.0 1.1E-46 3.9E-51 371.3 9.2 285 3-362 9-300 (338)
11 2vaw_A FTSZ, cell division pro 100.0 9E-46 3.1E-50 369.9 15.8 288 2-362 12-304 (394)
12 2vxy_A FTSZ, cell division pro 100.0 1.3E-45 4.5E-50 367.4 14.1 287 2-362 12-303 (382)
13 3m89_A FTSZ/tubulin-related pr 100.0 3.4E-40 1.2E-44 327.9 12.8 285 4-335 45-363 (427)
14 4dxd_A Cell division protein F 100.0 1.5E-32 5.3E-37 271.1 12.7 267 4-338 20-291 (396)
15 3v3t_A Cell division GTPase FT 100.0 9.3E-32 3.2E-36 263.0 12.0 195 4-259 7-207 (360)
16 4ei7_A Plasmid replication pro 99.7 1.2E-17 4.2E-22 167.2 8.9 219 4-261 18-245 (389)
17 3r4v_A Putative uncharacterize 99.2 1.3E-11 4.3E-16 116.8 7.0 173 3-240 4-177 (315)
18 3g7n_A Lipase; hydrolase fold, 69.9 3.5 0.00012 38.2 4.0 70 104-178 96-165 (258)
19 3uue_A LIP1, secretory lipase 64.7 5.2 0.00018 37.4 4.1 70 104-178 110-179 (279)
20 3bed_A PTS system, IIA compone 61.2 5.7 0.00019 33.1 3.3 30 115-145 45-74 (142)
21 1pdo_A Mannose permease; phosp 61.0 15 0.0005 30.2 5.8 31 115-145 41-71 (135)
22 3lfh_A Manxa, phosphotransfera 50.5 11 0.00038 31.6 3.3 31 115-145 43-74 (144)
23 3o0d_A YALI0A20350P, triacylgl 46.7 9.6 0.00033 36.0 2.6 56 105-164 127-182 (301)
24 3ipr_A PTS system, IIA compone 46.6 31 0.001 28.9 5.5 31 115-145 41-71 (150)
25 1tia_A Lipase; hydrolase(carbo 45.4 12 0.00043 34.6 3.1 53 104-160 109-161 (279)
26 3gx1_A LIN1832 protein; APC633 44.0 29 0.001 28.4 4.9 38 114-153 43-80 (130)
27 3mtq_A Putative phosphoenolpyr 42.3 13 0.00044 31.9 2.4 30 116-145 61-90 (159)
28 1uwc_A Feruloyl esterase A; hy 41.7 11 0.00039 34.6 2.2 52 104-159 97-148 (261)
29 3ngm_A Extracellular lipase; s 40.9 14 0.00046 35.4 2.6 55 104-162 108-162 (319)
30 3ct6_A PTS-dependent dihydroxy 37.5 11 0.00039 31.1 1.3 27 117-145 44-70 (131)
31 1tib_A Lipase; hydrolase(carbo 36.8 14 0.00048 34.0 2.0 53 104-160 110-162 (269)
32 2nx2_A Hypothetical protein YP 32.5 1.3E+02 0.0043 26.0 7.4 112 115-242 25-138 (181)
33 3b48_A Uncharacterized protein 31.3 12 0.0004 31.0 0.4 28 117-145 49-76 (135)
34 1tgl_A Triacyl-glycerol acylhy 30.7 31 0.0011 31.5 3.3 51 103-157 107-157 (269)
35 2wlt_A L-asparaginase; hydrola 30.6 80 0.0027 30.1 6.3 76 110-190 65-141 (332)
36 3gdw_A Sigma-54 interaction do 29.5 52 0.0018 27.2 4.2 27 115-141 44-72 (139)
37 2him_A L-asparaginase 1; hydro 29.1 67 0.0023 31.0 5.4 96 109-212 82-178 (358)
38 2aot_A HMT, histamine N-methyl 28.3 94 0.0032 28.2 6.2 59 116-175 34-92 (292)
39 1wsa_A Asparaginase, asparagin 28.0 82 0.0028 30.0 5.8 76 109-189 62-138 (330)
40 1o7j_A L-asparaginase; atomic 27.3 52 0.0018 31.4 4.2 76 110-190 65-141 (327)
41 1zq1_A Glutamyl-tRNA(Gln) amid 25.4 80 0.0027 31.4 5.3 91 110-207 149-240 (438)
42 1lgy_A Lipase, triacylglycerol 25.4 59 0.002 29.7 4.1 50 104-157 109-158 (269)
43 2p10_A MLL9387 protein; putati 22.4 35 0.0012 32.0 1.9 34 115-156 13-46 (286)
44 3ff1_A Glucose-6-phosphate iso 22.0 45 0.0015 33.3 2.8 62 97-162 41-103 (446)
45 2d6f_A Glutamyl-tRNA(Gln) amid 21.4 1.1E+02 0.0039 30.3 5.6 90 110-207 148-238 (435)
46 1k2d_P MBP peptide, myelin bas 21.1 23 0.00078 20.2 0.2 8 144-151 16-23 (26)
47 3nxk_A Cytoplasmic L-asparagin 20.0 87 0.003 29.9 4.3 96 110-211 69-165 (334)
No 1
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=100.00 E-value=1.5e-114 Score=878.97 Aligned_cols=392 Identities=75% Similarity=1.245 Sum_probs=375.4
Q ss_pred CEeEEEEecCCchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCCccccccccCCCCCCccceeeeCCCCcccccccc
Q 015754 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRT 80 (401)
Q Consensus 1 MrEIItiq~Gq~GnqIG~~fW~~~~~E~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~PRailvD~e~~~i~~i~~ 80 (401)
|||||+||+||||||||++||+++|+||||++||.+.++...+..++++++||+|++.|+|+||||||||||+|||++++
T Consensus 1 mrEii~iqvGQcGnQIG~~~We~~~~EHgi~~~g~~~~~~~~~~~~~~~~~fF~e~~~gk~vPRavlvDlEp~vid~v~~ 80 (451)
T 3ryc_A 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRT 80 (451)
T ss_dssp CCCEEEEEEHHHHHHHHHHHHHHHHHHHTCCTTSCCCCC-------CGGGGTEEECTTSCEEESEEEEESSSHHHHHHHH
T ss_pred CceEEEEeccCchhHHHHHHHHHHHhhcCCCCCCCcCCcccccccccchhhhcccCCCCccccceeeecCCcchhheeee
Confidence 99999999999999999999999999999999999877654433577899999999999999999999999999999999
Q ss_pred cccccccCCceeeeccccccCCCCCCccccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHhhhh
Q 015754 81 GSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSVD 160 (401)
Q Consensus 81 ~~~~~~f~~~~~i~~~~g~gnnwa~G~~~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L~de 160 (401)
|+|+.+|||+++++|++|||||||+|||+.|+++.|+++|+||+++|+||+||||+++||+|||||||+|+.|+|+|+|+
T Consensus 81 g~~~~lf~p~~~i~gk~gAgNNwA~G~yt~G~e~~d~v~d~IRk~~E~cD~lqGF~i~hSlgGGTGSG~gs~lle~L~~e 160 (451)
T 3ryc_A 81 GTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD 160 (451)
T ss_dssp STTTTTSCGGGEEECSSCCTTCHHHHHHTSHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSHHHHHHHHHHHHHHHHH
T ss_pred cccccccCHHHeeeccccccCCCCeeecccchHhHHHHHHHHHHHHHcCCCccceEEEeccCCCCCccHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCcceEEEEEecCCCCCccchhhhHHHHHHHHHHhhcccchhcchHHHHHhhhccCCCCCCChhhhHHHHHHHHhhccc
Q 015754 161 YGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRLISQIISSLTT 240 (401)
Q Consensus 161 yp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~~ia~~i~~~t~ 240 (401)
|||+.+++++|+|++..++++++|||++|++++|.+++|+++++||++|+++|.+.+++..|+|.++|++||++++++|+
T Consensus 161 y~kk~~~~~~v~P~~~~s~~vvepYNa~Lsl~~L~e~sD~~~~idNeaL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT~ 240 (451)
T 3ryc_A 161 YGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240 (451)
T ss_dssp TTTCEEEEEEEECCTTTCCCTTHHHHHHHHHHHHGGGCSEEEEEEHHHHHHHHHHHHCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEEEEEecCCCcccccceehHHHHHHHHHHhcccceeEeccHHHHHHHHHhccCCCCCchhhHHHHHhccccccc
Confidence 99999999999999888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCccchhhhccccccCCccccccccCccccccccccccccCHHHHHHHhcCCCCCccccCCCCCceeccccccc
Q 015754 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSSMMAKCDPRHGKYMACCLMYR 320 (401)
Q Consensus 241 ~~Rf~g~~n~~l~~l~~nLvp~p~l~fl~~s~~P~~~~~~~~~~~~t~~~l~~~~f~~~~~~~~~~~~~~~~ls~~~~~R 320 (401)
++||||.+|.||.+|.+|||||||+||++++|+|+++..+..++++++.+|++++|++.|+|++|||+.|+||||++++|
T Consensus 241 slRf~G~lN~Dl~~l~tnLVP~PrlHF~~~s~aPl~s~~~~~~~~~sv~elt~~~f~~~n~m~~~dp~~gky~a~~~~~R 320 (451)
T 3ryc_A 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYR 320 (451)
T ss_dssp HHHTTCSSSCSHHHHHHHHCSSSSCCCCEEEEECCCBSSSCCCCCCCHHHHHHHTTCGGGBSSCCCGGGSCEEEEEEEEE
T ss_pred ccccCcccccCHHHHhhccCCCCceeeeccccCccccccccccccCCHHHHHHHHhccccceEecCCCCCchheehhhcc
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHHHhhhccccccccCCCCceEEEeccCCCcCchhhhhhhhcccceeeeecccccccccchHHHHhhhc
Q 015754 321 GDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHFCNIIKHSFLMVAKCMHGVQRIMTMNLHFDSSVFAIPDQLTLVD 400 (401)
Q Consensus 321 G~~~~~~i~~~~~~~k~~~~~~fv~W~p~~~k~~i~~~~p~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (401)
|+++++||++++.++|.|++++||+|+|+|||+|+|++||+..|+..||+ +++.+| |++|+|||++.|++++
T Consensus 321 G~v~~~dv~~~i~~ik~k~~~~Fv~W~p~~~kv~i~~~pP~~~p~~~la~----~~~s~~----~lsNsTaI~~~f~rl~ 392 (451)
T 3ryc_A 321 GDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAK----VQRAVC----MLSNTTAIAEAWARLD 392 (451)
T ss_dssp ESCCHHHHHHHHHHHHHHCCCCBCTTSCEEEEEEEECSCCCCCTTSSBCC----CSEEEE----EEEEEGGGHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHhhcCCcceEEEccCceeeeeeccCCccCCCccccc----cceeeE----EecCchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999886 677665 5899999999999986
No 2
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=100.00 E-value=4.3e-112 Score=859.69 Aligned_cols=382 Identities=41% Similarity=0.783 Sum_probs=367.4
Q ss_pred CEeEEEEecCCchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCCccccccccCCCCCCccceeeeCCCCcccccccc
Q 015754 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRT 80 (401)
Q Consensus 1 MrEIItiq~Gq~GnqIG~~fW~~~~~E~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~PRailvD~e~~~i~~i~~ 80 (401)
|||||+||+||||||||.+||+++|+||||+++|.+.++.+. ..+++++||+|++.|+|+||||||||||+|||++++
T Consensus 1 mrEii~i~vGQcGnQiG~~~We~~~~EHgi~~~g~~~~~~~~--~~~~~~~fF~e~~~~~~vpRavlvDlEp~vid~i~~ 78 (445)
T 3ryc_B 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDL--QLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRS 78 (445)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHHHHHHHTTBCTTSBBCCSCTH--HHHTGGGTEEECSTTBEEECEEEEESSSHHHHHHHT
T ss_pred CceEEEEecCCcHHHHHHHHHHHHHHHhCCCCCCCccCCccc--cccchhhccccCCCCccccceeEecCCchhhhhhhc
Confidence 999999999999999999999999999999999998766443 356789999999999999999999999999999999
Q ss_pred cccccccCCceeeeccccccCCCCCCccccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHhhhh
Q 015754 81 GSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSVD 160 (401)
Q Consensus 81 ~~~~~~f~~~~~i~~~~g~gnnwa~G~~~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L~de 160 (401)
|+|+.+|||+++++|++|||||||+|||+.|+++.|+++|+|||++|+||+||||+++||+|||||||+|++|+|+|+|+
T Consensus 79 g~~~~lf~p~~~i~g~~gAgNN~A~G~yt~G~e~~d~v~d~IRk~~E~cd~lqGf~i~hSlgGGTGSG~gs~lle~L~~e 158 (445)
T 3ryc_B 79 GPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREE 158 (445)
T ss_dssp STTGGGSCGGGEEECSSCCTTCHHHHHHSHHHHHHHHHHHHHHHHHHTCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHH
T ss_pred ccccceecccceEEccccccCCccccchhhhHHHHHHHHHHHHHHHHcCCccceEEEEeecCCCCCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCcceEEEEEecCCCCCccchhhhHHHHHHHHHHhhcccchhcchHHHHHhhhccCCCCCCChhhhHHHHHHHHhhccc
Q 015754 161 YGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRLISQIISSLTT 240 (401)
Q Consensus 161 yp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~~ia~~i~~~t~ 240 (401)
|||+.+++++|+|++..+++++||||++|++++|.+++|+++++||++|+++|.+.+++..|+|.++|++||++++++|+
T Consensus 159 y~kk~~~~~sV~Psp~~s~~vvepYNa~Lsl~~L~e~sD~~~~iDNeaL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT~ 238 (445)
T 3ryc_B 159 YPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238 (445)
T ss_dssp CTTSEEEEEEEECCGGGCSCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred cCccccceEEEEeCCccccccccchhhhhhHhhhhcccceeEeecchhHHHHHHhccCCCCCcchhhHHHHHhcchhhcc
Confidence 99999999999999877899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCccchhhhccccccCCccccccccCccccccccccccccCHHHHHHHhcCCCCCccccCCCCCceeccccccc
Q 015754 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSSMMAKCDPRHGKYMACCLMYR 320 (401)
Q Consensus 241 ~~Rf~g~~n~~l~~l~~nLvp~p~l~fl~~s~~P~~~~~~~~~~~~t~~~l~~~~f~~~~~~~~~~~~~~~~ls~~~~~R 320 (401)
++||||.+|+||.+|.+|||||||+||++++|+|+++..+..++++++.+|++++|+++|+|++|||+.||||||++++|
T Consensus 239 slRf~G~lN~Dl~~l~tnLVP~PrlhF~~~s~aP~~s~~~~~~~~~sv~elt~~~f~~~n~m~~~dp~~gky~a~~~~~R 318 (445)
T 3ryc_B 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVATIFR 318 (445)
T ss_dssp HHHSCCSSSCSHHHHHHHHCSSTTCCEEEEEEESCCCTTCCCCCCCCHHHHHHHTTSGGGBSSSCCGGGSCEEEEEEEEE
T ss_pred ccccCcccccCHHHHhhcccCCCceeeeccccCcccccchhhhccCCHHHHHHHHHhhcCCeeecCCCCCcceeeeeeee
Confidence 99999999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHHHhhhccccccccCCCCceEEEeccCCCcCchhhhhhhhcccceeeeecccccccccchHHHHhhhc
Q 015754 321 GDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHFCNIIKHSFLMVAKCMHGVQRIMTMNLHFDSSVFAIPDQLTLVD 400 (401)
Q Consensus 321 G~~~~~~i~~~~~~~k~~~~~~fv~W~p~~~k~~i~~~~p~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (401)
|+++++||++++.++|.|++++||+|+|+|+|+++|.+||.+. + +..++++|+|||++.|++++
T Consensus 319 G~v~~kdv~~~i~~ik~k~~~~Fv~W~p~~~k~~i~~~pp~~~------------~----~s~~~lsNsTaI~~~~~rl~ 382 (445)
T 3ryc_B 319 GRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGL------------K----MSSTFIGNSTAIQELFKRIS 382 (445)
T ss_dssp ESCCHHHHHHHHHHHHHHTGGGBCTTSTTCEEEEEESSCCTTC------------S----EEEEEEEEEGGGHHHHHHHH
T ss_pred cCCChHHHHHHHHHHHhhCcccCcccCCCceeeeeeccCCccc------------c----eeeeeecCcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999643 3 34457889999999999886
No 3
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*
Probab=100.00 E-value=2.6e-101 Score=789.63 Aligned_cols=384 Identities=31% Similarity=0.592 Sum_probs=357.3
Q ss_pred CEeEEEEecCCchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCCccccccccCCCCCCccceeeeCCCCcccccccc
Q 015754 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRT 80 (401)
Q Consensus 1 MrEIItiq~Gq~GnqIG~~fW~~~~~E~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~PRailvD~e~~~i~~i~~ 80 (401)
|||||+||+||||||||++||+++|.||+++++|.+.++.. ...+++++||+|++.++|+||||+|||||++|+++++
T Consensus 2 ~rEiItiqvGQ~GnqIG~~fWe~~~~Ehgi~~~g~~~~~~~--~~~~~~~vfF~e~~~~~yvPRavlvDLEp~vid~i~~ 79 (475)
T 3cb2_A 2 PREIITLQLGQCGNQIGFEFWKQLCAEHGISPEAIVEEFAT--EGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILN 79 (475)
T ss_dssp CCCEEEEEEHHHHHHHHHHHHHHHHHHTTBCTTSCBCTTCC--TTSSCGGGTEEECTTSCEEECEEEEESSSHHHHHHHH
T ss_pred CccEEEEecCCcHHHHHHHHHHHHHHhcCCCCCCCCcCccc--ccccccceeeeecCCCceecceeEecCCcceeeeecc
Confidence 79999999999999999999999999999999998765422 2357899999999999999999999999999999999
Q ss_pred cccccccCCceeeeccc--cccCCCCCCccccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHhh
Q 015754 81 GSYRQLFHPEQLISGKE--DAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLS 158 (401)
Q Consensus 81 ~~~~~~f~~~~~i~~~~--g~gnnwa~G~~~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L~ 158 (401)
++|+.+|+|++++.|++ |+||||++| |+.|++..|+++|+||+++|+||.+|||+++||+|||||||+|+.|+|.|+
T Consensus 80 ~~~~~lf~p~~~i~g~~g~gAgnn~a~G-~~~g~e~~d~~~d~Ir~~~E~cD~lqgf~i~~slGGGTGSG~~s~l~e~l~ 158 (475)
T 3cb2_A 80 SPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLN 158 (475)
T ss_dssp STTTTTSCGGGEEECCTTCCCTTCHHHH-HHHHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred ccccccCCccceeecccccCCCCCchhh-hhhhHhhHHHHHHHHHHHHhcCCCcceeEEeccCCCCCCcChHHHHHHHHH
Confidence 99999999999999987 799999999 578999999999999999999999999999999999999999999999999
Q ss_pred hhhCCcceEEEEEecCCC-CCccchhhhHHHHHHHHHHhhcccchhcchHHHHHhhhccCCCCCCChhhhHHHHHHHHhh
Q 015754 159 VDYGKKSKLGFTIYPSPQ-VSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRLISQIISS 237 (401)
Q Consensus 159 deyp~~~i~~~~v~P~~~-~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~~ia~~i~~ 237 (401)
|+||++.+++++|+|++. .++.++++||++|++++|.+++|++|++||++|+++|.+.+++..|+|.++|++||+++++
T Consensus 159 dey~~k~~lt~~V~P~~~e~se~vv~~yNa~lsl~~L~e~sD~~i~idNeaL~~i~~~~l~i~~p~f~~~N~lia~~vs~ 238 (475)
T 3cb2_A 159 DRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCLVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSA 238 (475)
T ss_dssp HHSTTSEEEEEEEECCTTSCCSCTTHHHHHHHHHHHHHHSCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHH
T ss_pred HHcCCCceEEEEEECCccccccceeehhHhHHHHHHHHhhCCEEEEeccHHHHHHHhhcCCCCcchHHHHHHHHhhhccc
Confidence 999999999999999985 5789999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCccchhhhccccccCCccccccccCcccccccc-ccccccCHHHHHHHhcCCCCCccccCCC---CCcee
Q 015754 238 LTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAK-AYHEQISVPEITSAVFEPSSMMAKCDPR---HGKYM 313 (401)
Q Consensus 238 ~t~~~Rf~g~~n~~l~~l~~nLvp~p~l~fl~~s~~P~~~~~~-~~~~~~t~~~l~~~~f~~~~~~~~~~~~---~~~~l 313 (401)
+|.++||||.+|.|+.++.+|||||||+||++++|+|+++..+ ..+++++|.+|++++|+++|+|++|||+ .|+||
T Consensus 239 iT~~lr~pG~lN~Dl~d~~tnLvP~PrlhFl~~s~aP~~s~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~~~~gkyl 318 (475)
T 3cb2_A 239 STTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYI 318 (475)
T ss_dssp HTTTTSSSSCTTCSHHHHHHHHCSSTTCCEEEEEEECCC------CCSCCCHHHHHHHTTSGGGBSSCCCCC--CCCCEE
T ss_pred cccccccCCcccchhhhhcceeecccceeEeecccccccccccccccccCCHHHHHHHHhccccceEecCcccccccchh
Confidence 9999999999999999999999999999999999999999877 7789999999999999999999999999 99999
Q ss_pred cccccccccCChhhHHHHHHHHhhhccccccccCCCCceEEEeccCCCcCchhhhhhhhcccceeeeecccccccccchH
Q 015754 314 ACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHFCNIIKHSFLMVAKCMHGVQRIMTMNLHFDSSVFAIP 393 (401)
Q Consensus 314 s~~~~~RG~~~~~~i~~~~~~~k~~~~~~fv~W~p~~~k~~i~~~~p~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~~ 393 (401)
||++++||++.+++|++++.++|.|++++|++|+|+++|+++|++||+..++.. +..++++|+|||.
T Consensus 319 a~~~~~RG~v~~~dv~~~i~~ik~k~~~~fv~W~p~~~k~~i~~~~p~~~~~~~-------------~s~~~lsN~TaI~ 385 (475)
T 3cb2_A 319 AILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHR-------------VSGLMMANHTSIS 385 (475)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTTCSCBCTTSCCCEEEEEECCCCC-----C-------------CEEEEEEEEGGGH
T ss_pred hhHHhhcCCCCHHHHHHHHHHhhcccCCccceecCCCceeeeeccCCccCCCcc-------------eEEEEecCChHHH
Confidence 999999999999999999999999999999999999999999999998654321 3457889999999
Q ss_pred HHHhhhc
Q 015754 394 DQLTLVD 400 (401)
Q Consensus 394 ~~~~~~~ 400 (401)
+.|++++
T Consensus 386 ~~f~ri~ 392 (475)
T 3cb2_A 386 SLFERTC 392 (475)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999885
No 4
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=100.00 E-value=3e-99 Score=768.03 Aligned_cols=380 Identities=38% Similarity=0.678 Sum_probs=331.8
Q ss_pred CEeEEEEecCCchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCCccccccccCCCCCCccceeeeCCCCcccccccc
Q 015754 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRT 80 (401)
Q Consensus 1 MrEIItiq~Gq~GnqIG~~fW~~~~~E~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~PRailvD~e~~~i~~i~~ 80 (401)
|||||+||+||||||||++||+++|.||+++++|.+.++.. ...++++++||+|+..++|+||||+||+||++++++++
T Consensus 1 MrEii~iq~GQ~GnqIg~~fW~~~~~ehgi~~~g~~~~~~~-~~~~~~~~~fF~e~~~~~yvPRav~vDle~~~l~~i~~ 79 (426)
T 2btq_B 1 VREILSIHVGQCGNQIADSFWRLALREHGLTEAGTLKEGSN-AAANSNMEVFFHKVRDGKYVPRAVLVDLEPGVIARIEG 79 (426)
T ss_dssp -CEEEEEEEHHHHHHHHHHHHHHHHHHHTBCTTSBBCC--------CCCTTTEEEEETTEEEECEEEEEECC--------
T ss_pred CCcEEEEecCCcHhHHHHHHHHHHHHHcCCCCCCCccCccc-ccccccccceeeecCCCceeeeeEEEecCccccccccc
Confidence 99999999999999999999999999999999998765431 12357799999999999999999999999999999999
Q ss_pred cccccccCCceeeeccccccCCCCCCccccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHhhhh
Q 015754 81 GSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSVD 160 (401)
Q Consensus 81 ~~~~~~f~~~~~i~~~~g~gnnwa~G~~~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L~de 160 (401)
++|+.+|||++++.|++|+|||||+|||+.|+++.|+++|+||+++|+||.+|||+++||+|||||||+|+.|+|.|+|+
T Consensus 80 ~~~~~lf~p~~i~~g~~gAgnn~a~G~~~~G~~~~e~~~d~Ir~~~e~cD~lqgf~i~~s~gGGTGSG~~~~l~e~l~~~ 159 (426)
T 2btq_B 80 GDMSQLFDESSIVRKIPGAANNWARGYNVEGEKVIDQIMNVIDSAVEKTKGLQGFLMTHSIGGGSGSGLGSLILERLRQA 159 (426)
T ss_dssp ----CCCCTTSEEECCSCCTTCHHHHHTHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEEESSSSTTTHHHHHHHHHHHTT
T ss_pred cccccccCcccccccccCccCcccccccchhHHHHHHHHHHHHHHHhcCCCcceEEEEEecCCCccccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCcceEEEEEecCCCCCccchhhhHHHHHHHHHHhhcccchhcchHHHHHhhhccCCCCCCChhhhHHHHHHHHhhccc
Q 015754 161 YGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRLISQIISSLTT 240 (401)
Q Consensus 161 yp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~~ia~~i~~~t~ 240 (401)
||++.+++++|+|.+..++.++++||++|++++|.+++|++|++||++|+++|.+.++ ..++|.++|++||++++++|.
T Consensus 160 y~~~~~lt~~V~p~p~~~e~~~~~yNa~lsl~~L~e~~D~~i~idN~al~~i~~~~l~-~~~~f~~~N~lia~~v~~it~ 238 (426)
T 2btq_B 160 YPKKRIFTFSVVPSPLISDSAVEPYNAILTLQRILDNADGAVLLDNEALFRIAKAKLN-RSPNYMDLNNIIALIVSSVTA 238 (426)
T ss_dssp CTTSEEEEEEEECCGGGCCCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHHSS-SCCCHHHHHHHHHHHHHHHHH
T ss_pred cCcCceEEEEEecCCccccchhhHHHHHHHHHHHHHhCCcceeeccHHHHHHHhccCC-CCcHHHHHHHHHHhhhcchhh
Confidence 9999999999999987789999999999999999999999999999999999999998 788999999999999999999
Q ss_pred ccccCCCCccchhhhccccccCCccccccccCccccccccccccccCHHHHHHHhcCCCCCccccCCCCCceeccccccc
Q 015754 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSSMMAKCDPRHGKYMACCLMYR 320 (401)
Q Consensus 241 ~~Rf~g~~n~~l~~l~~nLvp~p~l~fl~~s~~P~~~~~~~~~~~~t~~~l~~~~f~~~~~~~~~~~~~~~~ls~~~~~R 320 (401)
++||||.+|.|+.++.+|||||||+||++++|+|+++..+..+++.+|.+|++++|+++|+|++|||+.|+||||++++|
T Consensus 239 ~lr~~g~lN~D~~d~~t~lvP~P~~hf~~~~~aP~~~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~g~yla~~~i~r 318 (426)
T 2btq_B 239 SLRFPGKLNTDLSEFVTNLVPFPGNHFLTASFAPMRGAGQEGQVRTNFPDLARETFAQDNFTAAIDWQQGVYLAASALFR 318 (426)
T ss_dssp HHHSSCSSSCSHHHHHHHHCSSTTCCEEEEECSCC-----------CCHHHHHHHTCGGGBSSCCCTTTCCEEEEEEEEE
T ss_pred hccCCCcccCCHHHHHHHHhhCCCCceeeccccccccchhhccccCCHHHHhhhhcCccceeEecCCCCchHHHHHHHHc
Confidence 99999999999999999999999999999999999998888889999999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHHHhhhccccccccCC--CCceEEEeccCCCcCchhhhhhhhcccceeeeecccccccccchHHHHhh
Q 015754 321 GDVVPKDVNTAVATIKTKRAVQFVDWCP--TGFKCGIHFCNIIKHSFLMVAKCMHGVQRIMTMNLHFDSSVFAIPDQLTL 398 (401)
Q Consensus 321 G~~~~~~i~~~~~~~k~~~~~~fv~W~p--~~~k~~i~~~~p~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (401)
|++++++|++++..+ |++++|++|+| +++|+++|.+||.+.+ +..++++|+|+|.+.|++
T Consensus 319 G~v~~~~v~~~~~~i--k~~~~fv~W~p~~~~~k~~i~~~~p~~~~----------------~s~~~lsNstaI~~~~~~ 380 (426)
T 2btq_B 319 GDVKAKDVDENMATI--RKSLNYASYMPASGGLKLGYAETAPEGFA----------------SSGLALVNHTGIAAVFER 380 (426)
T ss_dssp CC----CTTTTHHHH--HTTSCBCTTSCSSCSEEEEEESCCCTTCS----------------SBCCEEEEEGGGHHHHHH
T ss_pred CCCCHHHHHHHHHHH--hcCCCCcccCCCCCceeeeeeccCCCCCc----------------ceeEEecCChHHHHHHHH
Confidence 999999999999888 67889999999 9999999999996433 344568999999999998
Q ss_pred hc
Q 015754 399 VD 400 (401)
Q Consensus 399 ~~ 400 (401)
++
T Consensus 381 ~~ 382 (426)
T 2btq_B 381 LI 382 (426)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 5
>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*
Probab=100.00 E-value=8.4e-97 Score=757.30 Aligned_cols=378 Identities=38% Similarity=0.711 Sum_probs=345.0
Q ss_pred CEeEEEEecCCchhHHHHHHHHHHHHhhCCCCC-CCCCCCCCCCCCCCccccccc---cCCCCCCccceeeeCCCCcccc
Q 015754 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPD-GTMPSDTSVGACHDAFNTFFS---ETGSGQHVPRAVFVDLEPSVID 76 (401)
Q Consensus 1 MrEIItiq~Gq~GnqIG~~fW~~~~~E~~i~~~-g~~~~~~~~~~~~~~~~~~F~---e~~~~~~~PRailvD~e~~~i~ 76 (401)
|||||+||+||||||||++||+++|+||+|+++ |.+.++... ++++++||+ |++.++|+||||+||+||++++
T Consensus 3 mrEii~iqvGQcGnqIG~~~We~~~~Ehgi~~~~g~~~~~~~~---~~~~~~fF~~~~e~~~~~~vpRav~vDlep~vi~ 79 (473)
T 2bto_A 3 VNNTIVVSIGQAGNQIAASFWKTVCLEHGIDPLTGQTAPGVAP---RGNWSSFFSKLGESSSGSYVPRAIMVDLEPSVID 79 (473)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHHHHHHHHTCCTTTCCCSSSCCC---SSSGGGTEEECSCC--CCEEECEEEEESSSHHHH
T ss_pred cccEEEEecCCcHHHHHHHHHHHHHHhcCCCCCCCeecCCCcc---cccccceecccccccCCceeeeeeEecCcchhhh
Confidence 899999999999999999999999999999999 888765432 577999999 9999999999999999999999
Q ss_pred cccccccccccCCceeeeccccccCCCCCCccccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHH
Q 015754 77 EVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLER 156 (401)
Q Consensus 77 ~i~~~~~~~~f~~~~~i~~~~g~gnnwa~G~~~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~ 156 (401)
++++++ +.+|+|++++++++|+|||||+|||+.|+++.|+++|+||+++|+||.+|||+++||+|||||||+|+.|+|.
T Consensus 80 ~i~~~~-~~lf~p~~~it~~~GAgnn~a~G~~~~G~~~~ee~~d~Ir~~~e~cD~lqgf~i~~slgGGTGSG~~~~l~e~ 158 (473)
T 2bto_A 80 NVKATS-GSLFNPANLISRTEGAGGNFAVGYLGAGREVLPEVMSRLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIES 158 (473)
T ss_dssp HHHHHS-TTCSCGGGEEECSSCCTTCHHHHHTSHHHHHHHHHHHHHHHHHHHCSSEEEEEEEEESSSSHHHHHHHHHHHH
T ss_pred hhhccc-cccccccceEecccCCCCCcCCCcchhhHHHHHHHHHHHHHHHHhCCCcceEEEEeeCCCCCCcchHHHHHHH
Confidence 999998 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhCCcceEEEEEecCCCCCccchhhhHHHHHHHHHHhhcccchhcchHHHHHhhhccCCCCCCChhhhHHHHHHHHh
Q 015754 157 LSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRLISQIIS 236 (401)
Q Consensus 157 L~deyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~~ia~~i~ 236 (401)
|+|+||++.+++++|+|++..++.++++||++|++++|.+++|++|++||++|+++|.+.+++..++|.++|++||++++
T Consensus 159 l~e~y~~~~ilt~~V~P~~~~~e~~v~~yNa~lsl~~L~e~~D~~i~idNeaL~~i~~~~l~i~~~~f~~~N~lia~~v~ 238 (473)
T 2bto_A 159 LKEKYGEIPVLSCAVLPSPQVSSVVTEPYNTVFALNTLRRSADACLIFDNEALFDLAHRKWNIESPTVDDLNLLITEALA 238 (473)
T ss_dssp HHHHTCSSCEEEEEEECCCCSSCEESHHHHHHHHHHHHHHTCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHH
T ss_pred HHHHcCCCceEEEEEecCCccccchhhHHHHHHHHHHHHhhCCeEEEeccHHHHHHhccccccCcchHHHHHHHHhhhcc
Confidence 99999999999999999987789999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccccCCCCccc--hhhhccccccCCccccccccCccccccccccccccCHHHHHHHhcCCCCCccccCCCCCceec
Q 015754 237 SLTTSLRFDGAINVD--ITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSSMMAKCDPRHGKYMA 314 (401)
Q Consensus 237 ~~t~~~Rf~g~~n~~--l~~l~~nLvp~p~l~fl~~s~~P~~~~~~~~~~~~t~~~l~~~~f~~~~~~~~~~~~~~~~ls 314 (401)
++|.++||||.+|.| +.++.++||||||+||++++|+|+++..+..+++.+|.++++++|+++|+|++|||+.|+||+
T Consensus 239 ~it~~lr~~g~lN~D~~l~d~~t~LvP~Prlhf~~~~~aPl~s~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~gkyla 318 (473)
T 2bto_A 239 GITASMRFSGFLTVEISLRELLTNLVPQPSLHFLMCAFAPLTPPDRSKFEELGIEEMIKSLFDNGSVFAACSPMEGRFLS 318 (473)
T ss_dssp HHHHHHHC------CCCHHHHHHHHCSSTTCCEEEEEEECCCCCC-----CCCHHHHHHHHTSGGGBSSSSCGGGSCEEE
T ss_pred cchhhcccCCcccCCccHHhhhhheeecCCcceeeeccccccccchhccccCCHHHHHhhhcccccceeecCCCCchHHH
Confidence 999999999999999 999999999999999999999999998888889999999999999999999999999999999
Q ss_pred ccccccccCChhhH-HHHHHHHhhhccccccccCCCCceEEEeccCCCcCchhhhhhhhcccceeeeecccccccccchH
Q 015754 315 CCLMYRGDVVPKDV-NTAVATIKTKRAVQFVDWCPTGFKCGIHFCNIIKHSFLMVAKCMHGVQRIMTMNLHFDSSVFAIP 393 (401)
Q Consensus 315 ~~~~~RG~~~~~~i-~~~~~~~k~~~~~~fv~W~p~~~k~~i~~~~p~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~~ 393 (401)
|++++||+++++++ ++++..+|.|++++| |+|+++|+++|.+||.+ +++ ..++++|+|+|.
T Consensus 319 ~~~i~RG~v~~~dv~~~~i~~ik~k~~~~F--W~p~~~kv~i~~~pp~g------------~~~----s~~~lsNsTaI~ 380 (473)
T 2bto_A 319 TAVLYRGIMEDKPLADAALAAMREKLPLTY--WIPTAFKIGYVEQPGIS------------HRK----SMVLLANNTEIA 380 (473)
T ss_dssp EEEEEEEC----CCHHHHHHHHHTTSCBCS--SSCCCEEEEEESSCCSS------------CSE----EEEEEEEETTHH
T ss_pred HHHhhcCCCChHHhhHHHHHHHHhhcccce--ecCCcceecccccCCcC------------cce----eEEEecCCchHH
Confidence 99999999999999 999999999999999 99999999999999963 333 345699999999
Q ss_pred HHHhhhc
Q 015754 394 DQLTLVD 400 (401)
Q Consensus 394 ~~~~~~~ 400 (401)
+.|++++
T Consensus 381 ~~~~~l~ 387 (473)
T 2bto_A 381 RVLDRIC 387 (473)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999875
No 6
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=1.1e-47 Score=379.74 Aligned_cols=288 Identities=16% Similarity=0.230 Sum_probs=248.3
Q ss_pred CEeEEEEecCCchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCCccccccccCCCCCCccceeeeCCCCcccccccc
Q 015754 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRT 80 (401)
Q Consensus 1 MrEIItiq~Gq~GnqIG~~fW~~~~~E~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~PRailvD~e~~~i~~i~~ 80 (401)
|++|++|++|||||++++++|+ |++. | .+.+.+|+|...++....
T Consensus 21 ~~~I~vIGvGg~G~n~vn~m~~-----~gi~---------------------------g---v~~ia~nTD~q~L~~~~a 65 (353)
T 1w5f_A 21 NLKIKVIGVGGAGNNAINRMIE-----IGIH---------------------------G---VEFVAVNTDLQVLEASNA 65 (353)
T ss_dssp -CCEEEEEEHHHHHHHHHHHHH-----HCCT---------------------------T---EEEEEEESCHHHHHTCCC
T ss_pred CCEEEEECcCchHHHHHHHHHH-----hCCC---------------------------C---CCEEEEcCCHHHHhcCCC
Confidence 4689999999999999999998 3331 1 467899998887765432
Q ss_pred cccccccCCceeeecc-----ccccCCCCCCccccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHH
Q 015754 81 GSYRQLFHPEQLISGK-----EDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLE 155 (401)
Q Consensus 81 ~~~~~~f~~~~~i~~~-----~g~gnnwa~G~~~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle 155 (401)
|+.+..|+ .|+||||+. |++..|+.+|.||+++|.|| +|+++||+|||||||+++.|++
T Consensus 66 --------~~~i~iG~~~t~G~GAG~n~~~-----G~~~aee~~d~I~~~le~~d---~~~i~as~GGGTGSG~ap~la~ 129 (353)
T 1w5f_A 66 --------DVKIQIGENITRGLGAGGRPEI-----GEQAALESEEKIREVLQDTH---MVFITAGFGGGTGTGASPVIAK 129 (353)
T ss_dssp --------SEEEECCTTTTTTSCCTTCHHH-----HHHHHHHTHHHHHHHTTTCS---EEEEEEETTSSHHHHHHHHHHH
T ss_pred --------CcEEEccCcccCCCCCCCChHH-----HHHHHHHHHHHHHHHHccCC---EEEEEeccCCCccccHHHHHHH
Confidence 45665655 489999985 58899999999999999998 4999999999999999999999
Q ss_pred HhhhhhCCcceEEEEEecCCCCCccchhhhHHHHHHHHHHhhcccchhcchHHHHHhhhccCCCCCCChhhhHHHHHHHH
Q 015754 156 RLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRLISQII 235 (401)
Q Consensus 156 ~L~deyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~~ia~~i 235 (401)
.++| |+ +.+++|+|.|...|..++|||+.+++++|.+++|++|++||++|+++|.+.+.+. ++|..+|++|++.+
T Consensus 130 ~~ke-~g---~lt~~Vvt~Pf~~Eg~~~~~nA~~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~ll~~~v 204 (353)
T 1w5f_A 130 IAKE-MG---ILTVAIVTTPFYFEGPERLKKAIEGLKKLRKHVDTLIKISNNKLMEELPRDVKIK-DAFLKADETLHQGV 204 (353)
T ss_dssp HHHH-TT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHTTSCTTCCHH-HHHHHHHHHHHHHH
T ss_pred HHHH-hC---CcEEEEEeCCcccccchhHHHHHHHHHHHHhhCCEEEEEecHHHHhhhcccCCHH-HHHHHHHHHHHHHh
Confidence 9987 65 6666666665556889999999999999999999999999999999999888887 58999999999999
Q ss_pred hhcccccccCCCCcc--chhhhccccccCCccccccccCccccccccccccccCHHHHHHHhcCCCCCccccCCCCCcee
Q 015754 236 SSLTTSLRFDGAINV--DITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSSMMAKCDPRHGKYM 313 (401)
Q Consensus 236 ~~~t~~~Rf~g~~n~--~l~~l~~nLvp~p~l~fl~~s~~P~~~~~~~~~~~~t~~~l~~~~f~~~~~~~~~~~~~~~~l 313 (401)
+++|.++||||.+|. |+.++.++|+| |++||+..+++.- ..++.++++++|+ ++|+.||++.++|+
T Consensus 205 ~~it~~ir~pG~iNv~~D~~dv~t~L~~-~g~a~~g~g~a~g---------~~~v~ea~~~a~~--~~ll~~d~~~ak~~ 272 (353)
T 1w5f_A 205 KGISELITKRGYIRLTSRFARIESVMKD-AGAAILGIGVGKG---------EHRAREAAKKAME--SKLIEHPVENASSI 272 (353)
T ss_dssp HHHHHHHHCCCCCCHHHHHHHHHHHHTT-CEEEEEEEEEEES---------TTHHHHHHHHHHT--CTTCCSCGGGCSEE
T ss_pred cCchhhccCCcccccccCHHHHHHhccC-CCeeEEEEeecCC---------cchHHHHHHHHHh--CCCcCCChhhccee
Confidence 999999999999999 99999999999 9999998877531 2468899999994 66778999999999
Q ss_pred cccccccccCChhhHHHHHHHHhhhccccccccCCCCceEEEeccCCCc
Q 015754 314 ACCLMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHFCNIIK 362 (401)
Q Consensus 314 s~~~~~RG~~~~~~i~~~~~~~k~~~~~~fv~W~p~~~k~~i~~~~p~~ 362 (401)
++++++||+++++|+++++..++.+.. .|.++++|++..||..
T Consensus 273 l~~i~~~~dl~~~ev~~a~~~I~~~~~------~~~~i~~G~~~d~~~~ 315 (353)
T 1w5f_A 273 VFNITAPSNIRMEEVHEAAMIIRQNSS------EDADVKFGLIFDDEVP 315 (353)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHTTSC------TTSEEEEEEEECTTSC
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHhhC------CCCcEEEEEEeCCCCC
Confidence 999999999999999999999987654 2788999999888753
No 7
>2vap_A FTSZ, cell division protein FTSZ homolog 1; polymerization, tubulin homolog, GTPase, septation, cell cycle, GTP-binding; HET: GDP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.32.1.1 d.79.2.1 PDB: 1w59_A 1w58_1* 1w5a_A* 1w5b_A* 1fsz_A* 1w5e_A*
Probab=100.00 E-value=3.9e-47 Score=376.60 Aligned_cols=284 Identities=18% Similarity=0.274 Sum_probs=246.6
Q ss_pred eEEEEecCCchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCCccccccccCCCCCCccceeeeCCCCcccccccccc
Q 015754 3 EIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGS 82 (401)
Q Consensus 3 EIItiq~Gq~GnqIG~~fW~~~~~E~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~PRailvD~e~~~i~~i~~~~ 82 (401)
+|++|++|||||++++++|+. ++. | -..+.+|+|...++.+..
T Consensus 39 ~I~vIGvGg~G~n~v~~m~~~-----gi~---------------------------g---v~fia~NTD~q~L~~~~a-- 81 (364)
T 2vap_A 39 KITVVGCGGAGNNTITRLKME-----GIE---------------------------G---AKTVAINTDAQQLIRTKA-- 81 (364)
T ss_dssp CEEEEEEHHHHHHHHHHHHHH-----TCT---------------------------T---EEEEEEESBHHHHHTSCC--
T ss_pred eEEEEeeCchHHHHHHHHHHh-----CCC---------------------------C---CCEEEEcCcHHHHhcCCC--
Confidence 699999999999999999985 221 0 134788888877655432
Q ss_pred cccccCCceeeecc-----ccccCCCCCCccccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHh
Q 015754 83 YRQLFHPEQLISGK-----EDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERL 157 (401)
Q Consensus 83 ~~~~f~~~~~i~~~-----~g~gnnwa~G~~~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L 157 (401)
|+.+..|+ .|+||||++| +++.|+.+|.||+++|.||.+ +++||+|||||||+++.|++.+
T Consensus 82 ------~~ki~iG~~~t~G~GAGnn~a~G-----~~~~ee~~d~Ir~~le~~D~l---~i~as~GGGTGSG~ap~lae~l 147 (364)
T 2vap_A 82 ------DKKILIGKKLTRGLGAGGNPKIG-----EEAAKESAEEIKAAIQDSDMV---FITCGLGGGTGTGSAPVVAEIS 147 (364)
T ss_dssp ------SEEEECCTTTTTTBCCTTCHHHH-----HHHHHHTHHHHHHHHTTCSEE---EEEEETTSSHHHHHHHHHHHHH
T ss_pred ------CcEEEeccccccCCCCCCChHHH-----HHHHHHHHHHHHHHHhcCCEE---EEeccCCCCCCCChHHHHHHHH
Confidence 44555543 5999999987 899999999999999999987 9999999999999999999999
Q ss_pred hhhhCCcceEEEEEecCCCCCccchhhhHHHHHHHHHHhhcccchhcchHHHHHhhhccCCCCCCChhhhHHHHHHHHhh
Q 015754 158 SVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRLISQIISS 237 (401)
Q Consensus 158 ~deyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~~ia~~i~~ 237 (401)
+| | .+.+++|+|.|...+.++++||+++++++|.+++|++|++||++|+++|. .+.+ .++|.++|++|++.+++
T Consensus 148 ke-~---~~lt~~Vv~~Pf~~eg~~~~ynA~~~l~~L~e~~D~~ividNeaL~~i~~-~l~i-~~af~~~N~li~~~v~~ 221 (364)
T 2vap_A 148 KK-I---GALTVAVVTLPFVMEGKVRMKNAMEGLERLKQHTDTLVVIPNEKLFEIVP-NMPL-KLAFKVADEVLINAVKG 221 (364)
T ss_dssp HH-T---TCEEEEEEEECCGGGCHHHHHHHHHHHHHHHTTCSEEEEEEGGGHHHHST-TCCH-HHHHHHHHHHHHHHHHH
T ss_pred HH-h---CCcEEEEeCCCccccchhHHHHHHHHHHHHHHhCCeEEEEcHHHHHHHHc-cCCh-hhhhhhHHHHHHHHHhh
Confidence 98 7 46677777766656789999999999999999999999999999999998 8888 78999999999999999
Q ss_pred cccccccCCCCccchhhhccccccCCccccccccCccccccccccccccCHHHHHHHhcCCCCCccccCCCCCceecccc
Q 015754 238 LTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSSMMAKCDPRHGKYMACCL 317 (401)
Q Consensus 238 ~t~~~Rf~g~~n~~l~~l~~nLvp~p~l~fl~~s~~P~~~~~~~~~~~~t~~~l~~~~f~~~~~~~~~~~~~~~~ls~~~ 317 (401)
+|.++||||.+|.|+.++.++|+| |++||+..++++- ..++.++++++| +++|+.||++.++|+++++
T Consensus 222 it~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~--~~~ll~~d~~~ak~~l~~i 289 (364)
T 2vap_A 222 LVELITKDGLINVDFADVKAVMNN-GGLAMIGIGESDS---------EKRAKEAVSMAL--NSPLLDVDIDGATGALIHV 289 (364)
T ss_dssp HHHHHHSCCSBCCCHHHHHHHHTT-CEEEEEEEEEECS---------TTHHHHHHHHHH--TCTTCCSCGGGCCEEEEEE
T ss_pred hhHHhhcCCceeccHHHHHHhccC-CCeeEEEEEecCC---------cchHHHHHHHHH--hCcCcCcChhhcceEEEEE
Confidence 999999999999999999999999 9999999887641 135788999999 4678899999999999999
Q ss_pred cccccCChhhHHHHHHHHhhhccccccccCC-CCceEEEeccCCCc
Q 015754 318 MYRGDVVPKDVNTAVATIKTKRAVQFVDWCP-TGFKCGIHFCNIIK 362 (401)
Q Consensus 318 ~~RG~~~~~~i~~~~~~~k~~~~~~fv~W~p-~~~k~~i~~~~p~~ 362 (401)
++||+++++|+++++..++.+.. | .++++|++..||..
T Consensus 290 ~~~~dl~~~ev~~a~~~I~~~~~-------~~a~ii~G~~~~~~~~ 328 (364)
T 2vap_A 290 MGPEDLTLEEAREVVATVSSRLD-------PNATIIWGATIDENLE 328 (364)
T ss_dssp EECTTCCHHHHHHHHHHHHHHSC-------TTCEEEEEEEECTTCS
T ss_pred EeCCCCCHHHHHHHHHHHHHhcC-------CCCCEEEEEEecCCCC
Confidence 99999999999999999987654 4 68999999888764
No 8
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=2.1e-46 Score=367.02 Aligned_cols=286 Identities=15% Similarity=0.212 Sum_probs=244.3
Q ss_pred eEEEEecCCchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCCccccccccCCCCCCccceeeeCCCCcccccccccc
Q 015754 3 EIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGS 82 (401)
Q Consensus 3 EIItiq~Gq~GnqIG~~fW~~~~~E~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~PRailvD~e~~~i~~i~~~~ 82 (401)
+|++|++|||||++++++|+ |++. | .+.+.+|+|.+.++.++
T Consensus 13 ~I~viGvGg~G~n~v~~m~~-----~gi~---------------------------g---v~~i~~ntD~q~L~~~~--- 54 (320)
T 1ofu_A 13 VIKVIGVGGGGGNAVNHMAK-----NNVE---------------------------G---VEFICANTDAQALKNIA--- 54 (320)
T ss_dssp CEEEEEEHHHHHHHHHHHHH-----TTCC---------------------------S---EEEEEEESBTGGGSSCS---
T ss_pred EEEEECcCchHHHHHHHHHH-----hCCC---------------------------C---CCEEEEcCCHHHHhcCC---
Confidence 69999999999999999998 3321 1 46799999998876553
Q ss_pred cccccCCceeeecc-----ccccCCCCCCccccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHh
Q 015754 83 YRQLFHPEQLISGK-----EDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERL 157 (401)
Q Consensus 83 ~~~~f~~~~~i~~~-----~g~gnnwa~G~~~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L 157 (401)
.|+.+..|+ .|+||||+. |++..|+.+|.||+++|.|| +|+++||+|||||||+++.|++ +
T Consensus 55 -----a~~~i~iG~~~t~g~GAG~n~~~-----G~~~~ee~~d~I~~~le~~d---~~~i~as~GGGTGSG~~~~la~-~ 120 (320)
T 1ofu_A 55 -----ARTVLQLGPGVTKGLGAGANPEV-----GRQAALEDRERISEVLEGAD---MVFITTGMGGGTGTGAAPIIAE-V 120 (320)
T ss_dssp -----CSEEEECCHHHHTTBCCCSCHHH-----HHHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-H
T ss_pred -----CCcEEEccCCccCCCCCCCCHHH-----HHHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHH-H
Confidence 355666654 489999985 57899999999999999998 5999999999999999997765 5
Q ss_pred hhhhCCcceEEEEEecCCCCCccchhhhHHHHHHHHHHhhcccchhcchHHHHHhhhccCCCCCCChhhhHHHHHHHHhh
Q 015754 158 SVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRLISQIISS 237 (401)
Q Consensus 158 ~deyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~~ia~~i~~ 237 (401)
.+||+ +.+++|+|.|...|..++|||+.+++++|.+++|++|++||++|+++|.+.+.+. ++|..+|++|++.+++
T Consensus 121 a~e~g---~lt~~vv~~P~~~Eg~~~~~nA~~~l~~L~e~~D~~ividNe~L~~i~~~~l~i~-~af~~~n~~l~~~v~~ 196 (320)
T 1ofu_A 121 AKEMG---ILTVAVVTRPFPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLL-AAFAKADDVLAGAVRG 196 (320)
T ss_dssp HHHTT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHH-HHHHHHHHHHHHHHHH
T ss_pred HHhcC---CcEEEEEeCCccccchhHHHHHHHHHHHHHHhCCEEEEEecHHhhhhhhcCCCHH-HHHHHHHHHHHHHhcc
Confidence 56673 4555665555446889999999999999999999999999999999999888887 5899999999999999
Q ss_pred cccccccCCCCccchhhhccccccCCccccccccCccccccccccccccCHHHHHHHhcCCCCCccc-cCCCCCceeccc
Q 015754 238 LTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSSMMAK-CDPRHGKYMACC 316 (401)
Q Consensus 238 ~t~~~Rf~g~~n~~l~~l~~nLvp~p~l~fl~~s~~P~~~~~~~~~~~~t~~~l~~~~f~~~~~~~~-~~~~~~~~ls~~ 316 (401)
+|.++||||.+|.|+.++.++|+| |++||+..++++- .....+++++.|+ ++|+. ||++.++|+.++
T Consensus 197 it~~ir~pG~iNvD~~dv~t~l~~-~g~~~~g~g~a~g---------~~~~~~a~~~a~~--~~ll~~~d~~~ak~~l~~ 264 (320)
T 1ofu_A 197 ISDIIKRPGMINVDFADVKTVMSE-MGMAMMGTGCASG---------PNRAREATEAAIR--NPLLEDVNLQGARGILVN 264 (320)
T ss_dssp HHHHHHSCSSSSCCHHHHHHHHTT-CEEEEEEEEEEES---------TTHHHHHHHHHHT--CGGGTTCCGGGCSEEEEE
T ss_pred cHhhcccCCceeecHHHHHHhccC-CCeeEEEEEecCc---------ccHHHHHHHHHHh--ccccccCCccccceEEEE
Confidence 999999999999999999999999 9999998887641 1346889999998 45665 999999999999
Q ss_pred ccccccCChhhHHHHHHHHhhhccccccccCCCCceEEEeccCCCc
Q 015754 317 LMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHFCNIIK 362 (401)
Q Consensus 317 ~~~RG~~~~~~i~~~~~~~k~~~~~~fv~W~p~~~k~~i~~~~p~~ 362 (401)
+.+||+++++|+++++..++.+... |.++++|++..||..
T Consensus 265 i~~~~d~~~~ev~~a~~~i~~~~~~------~~~ii~G~~~~~~~~ 304 (320)
T 1ofu_A 265 ITAGPDLSLGEYSDVGNIIEQFASE------HATVKVGTVIDADMR 304 (320)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHSCT------TSEEEEEEEECTTCC
T ss_pred EEeCCCCCHHHHHHHHHHHHHhcCC------CCcEEEEEEcCCCCC
Confidence 9999999999999999999876542 688999999988764
No 9
>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A*
Probab=100.00 E-value=1.6e-46 Score=374.05 Aligned_cols=287 Identities=15% Similarity=0.197 Sum_probs=243.4
Q ss_pred EeEEEEecCCchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCCccccccccCCCCCCccceeeeCCCCccccccccc
Q 015754 2 REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTG 81 (401)
Q Consensus 2 rEIItiq~Gq~GnqIG~~fW~~~~~E~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~PRailvD~e~~~i~~i~~~ 81 (401)
.+|++|++|||||++++++|+ |++. | .+.+.+|+|...++.++
T Consensus 12 ~~I~vIGvGg~G~n~vn~m~~-----~gi~---------------------------g---v~fia~NTD~q~L~~~~-- 54 (382)
T 1rq2_A 12 AVIKVVGIGGGGVNAVNRMIE-----QGLK---------------------------G---VEFIAINTDAQALLMSD-- 54 (382)
T ss_dssp CCEEEEEEHHHHHHHHHHHHH-----TTCC---------------------------S---EEEEEEESCHHHHHHCC--
T ss_pred CEEEEECcCchHHHHHHHHHH-----hCCC---------------------------C---CCEEEecCCHHHHhcCC--
Confidence 479999999999999999998 3321 1 46799999988776553
Q ss_pred ccccccCCceeeecc-----ccccCCCCCCccccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHH
Q 015754 82 SYRQLFHPEQLISGK-----EDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLER 156 (401)
Q Consensus 82 ~~~~~f~~~~~i~~~-----~g~gnnwa~G~~~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~ 156 (401)
.|+.+..|+ .|+||||+.| ++..|+.+|.||+++|.|| +|+++||+|||||||+++.|++
T Consensus 55 ------a~~~i~iG~~~t~G~GAG~n~~~G-----~~~aee~~d~Ir~~le~~d---~~fi~as~GGGTGSG~ap~lae- 119 (382)
T 1rq2_A 55 ------ADVKLDVGRDSTRGLGAGADPEVG-----RKAAEDAKDEIEELLRGAD---MVFVTAGEGGGTGTGGAPVVAS- 119 (382)
T ss_dssp ------CSEEEECCTTTC-----CCCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-
T ss_pred ------CCcEEEecccccCCCCCCCChHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHH-
Confidence 355565554 4899998854 7899999999999999998 5999999999999999999998
Q ss_pred hhhhhCCcceEEEEEecCCCCCccchhhhHHHHHHHHHHhhcccchhcchHHHHHhhhccCCCCCCChhhhHHHHHHHHh
Q 015754 157 LSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRLISQIIS 236 (401)
Q Consensus 157 L~deyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~~ia~~i~ 236 (401)
|++||+ +.+++|+|.+...|.++++||+++++++|.+++|++|++||++|+++|.+.+.+. ++|..+|++|++.++
T Consensus 120 la~e~g---~ltvsVv~~Pf~~Eg~~~~~nA~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~li~~~vs 195 (382)
T 1rq2_A 120 IARKLG---ALTVGVVTRPFSFEGKRRSNQAENGIAALRESCDTLIVIPNDRLLQMGDAAVSLM-DAFRSADEVLLNGVQ 195 (382)
T ss_dssp HHHHHT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHTTSSCTTCCHH-HHHHHHHHHHHHHHH
T ss_pred HHHHcC---CcEEEEEecCcccccchHHHHHHHHHHHHHHhCCEEEEEechhHHHHhcCCCCHH-HHHHHHHHHHHHHHH
Confidence 778887 4455555544446889999999999999999999999999999999999888887 689999999999999
Q ss_pred hcccccccCCCCccchhhhccccccCCccccccccCccccccccccccccCHHHHHHHhcCCCCCccccCCCCCceeccc
Q 015754 237 SLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSSMMAKCDPRHGKYMACC 316 (401)
Q Consensus 237 ~~t~~~Rf~g~~n~~l~~l~~nLvp~p~l~fl~~s~~P~~~~~~~~~~~~t~~~l~~~~f~~~~~~~~~~~~~~~~ls~~ 316 (401)
++|.++||||.+|.|+.++.++|+| |+++|+..+++.- .....++++++|+ ++|+.||++.++|+.++
T Consensus 196 ~it~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~~--s~ll~~d~~~ak~~l~~ 263 (382)
T 1rq2_A 196 GITDLITTPGLINVDFADVKGIMSG-AGTALMGIGSARG---------EGRSLKAAEIAIN--SPLLEASMEGAQGVLMS 263 (382)
T ss_dssp HHHHHHHSBCSSCCCHHHHHHHHTT-CEEEEEEEEEEES---------TTHHHHHHHHHHT--CGGGTTCGGGCSEEEEE
T ss_pred HHHHHHccCCceeccHHHHHHhccC-CCeeEEEeeeccc---------ccHHHHHHHHHHh--CcCcCCChhchheEEEE
Confidence 9999999999999999999999999 9999998876531 2357889999994 78889999999999987
Q ss_pred ccccccCChhhHHHHHHHHhhhccccccccCCCCceEEEeccCCCc
Q 015754 317 LMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHFCNIIK 362 (401)
Q Consensus 317 ~~~RG~~~~~~i~~~~~~~k~~~~~~fv~W~p~~~k~~i~~~~p~~ 362 (401)
+..+++++++|+++++..++.+.. .|.++++|+|..||..
T Consensus 264 i~gg~dl~~~ev~~a~~~I~~~~~------~~a~ii~G~~~d~~~~ 303 (382)
T 1rq2_A 264 IAGGSDLGLFEINEAASLVQDAAH------PDANIIFGTVIDDSLG 303 (382)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHSC------TTCEEEEEEEECGGGT
T ss_pred EEeCCCCCHHHHHHHHHHHHHhhC------CCCCEEEEEEeCCCCC
Confidence 777779999999999999987654 5789999999888753
No 10
>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1*
Probab=100.00 E-value=1.1e-46 Score=371.27 Aligned_cols=285 Identities=17% Similarity=0.264 Sum_probs=249.2
Q ss_pred eEEEEecCCchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCCccccccccCCCCCCccceeeeCCCCcccccccccc
Q 015754 3 EIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGS 82 (401)
Q Consensus 3 EIItiq~Gq~GnqIG~~fW~~~~~E~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~PRailvD~e~~~i~~i~~~~ 82 (401)
.|..|++||+|+++.+++|+. ++ +| ++.|++|+|...++..+.
T Consensus 9 ~I~viGvGg~G~n~vn~m~~~-----~~---------------------------~g---v~~ia~NTD~q~L~~~~a-- 51 (338)
T 2r75_1 9 KIKVIGVGGGGSNAVNRMYED-----GI---------------------------EG---VELYAINTDVQHLSTLKV-- 51 (338)
T ss_dssp CEEEEEEHHHHHHHHHHHHHT-----TC---------------------------CS---CEEEEEESBHHHHHTCCC--
T ss_pred eEEEEeeCccHHHHHHHHHHh-----CC---------------------------CC---ceEEEEECCHHHHhcCCC--
Confidence 488999999999999999983 11 01 688999999998876533
Q ss_pred cccccCCceeeecc-----ccccCCCCCCccccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHh
Q 015754 83 YRQLFHPEQLISGK-----EDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERL 157 (401)
Q Consensus 83 ~~~~f~~~~~i~~~-----~g~gnnwa~G~~~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L 157 (401)
|+.+..|+ +|+||||+.| +++.|+.+|.||+++|.||.+ +++||+|||||||+++. ++.+
T Consensus 52 ------~~ki~iG~~~t~g~GAGnn~a~G-----~~~~ee~~d~Ir~~~e~~D~l---~i~~s~GGGTGSG~~~~-ia~l 116 (338)
T 2r75_1 52 ------PNKIQIGEKVTRGLGAGAKPEVG-----EEAALEDIDKIKEILRDTDMV---FISAGLGGGTGTGAAPV-IAKT 116 (338)
T ss_dssp ------SEEEECCHHHHTTBCCTTCHHHH-----HHHHHHTHHHHHHHHSSCSEE---EEEEETTSSHHHHHHHH-HHHH
T ss_pred ------CcEEEecCcccCCCCCCCChHHH-----HHHHHHHHHHHHHHHccCCee---EEecccCCCcCCCchHH-HHHH
Confidence 44555554 7999999965 799999999999999999988 99999999999999999 7778
Q ss_pred hhhhCCcceEEEEEecCCCCCccchhhhHHHHHHHHHHhhcccchhcchHHHHHhhhccCCCCCCChhhhHHHHHHHHhh
Q 015754 158 SVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRLISQIISS 237 (401)
Q Consensus 158 ~deyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~~ia~~i~~ 237 (401)
++||| +++++|+|.+...|.++++||+++++++|.+++|++|++||++|+++|.+.+.+. ++|.++|++|++.+++
T Consensus 117 ~~e~g---~lt~~Vv~~P~~~eg~~~~ynA~~~l~~L~e~~D~~ividNe~L~~i~~~~l~i~-~af~~~N~~i~~~v~~ 192 (338)
T 2r75_1 117 AKEMG---ILTVAVATLPFRFEGPRKMEKALKGLEKLKESSDAYIVIHNDKIKELSNRTLTIK-DAFKEVDSVLSKAVRG 192 (338)
T ss_dssp HHHTT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHHTSCCCSSHH-HHHHHHHHHHHHHHHH
T ss_pred HHhcC---CCEEEEeCCCccccchhhHHHHHHHHHHHHhcCCeEEEeccHHHHhhhhccCChH-HHHHHHHHHHHHHHhh
Confidence 88996 6788888887777999999999999999999999999999999999999888887 7999999999999999
Q ss_pred cccccccCCCCccchhhhccccccCCccccccccCccccccccccccccCHHHHHHHhcCCCCCccccCCCCCceecccc
Q 015754 238 LTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSSMMAKCDPRHGKYMACCL 317 (401)
Q Consensus 238 ~t~~~Rf~g~~n~~l~~l~~nLvp~p~l~fl~~s~~P~~~~~~~~~~~~t~~~l~~~~f~~~~~~~~~~~~~~~~ls~~~ 317 (401)
+|.++||||.+|.|+.++.++|+|+ +++|+..+++|- ....++....+|++.+|+ .|+|..+++ |++
T Consensus 193 it~~ir~pG~iNvD~~dv~t~L~~~-g~a~~g~g~a~g----~~r~~~a~~~ai~s~lle-~n~~~~a~~-------~l~ 259 (338)
T 2r75_1 193 ITSIVVTPAVINVDFADVRTTLEEG-GLSIIGMGEGRG----DEKADIAVEKAVTSPLLE-GNTIEGARR-------LLV 259 (338)
T ss_dssp HHHHHHSCCSBCCCHHHHHHHHTTC-EEEEEEEEEEES----TTHHHHHHHHHHHCBSSB-SSCGGGCSE-------EEE
T ss_pred hhhhhccCCceeCCHHHhhhheeCC-ccceeeeccCCc----cchHHHHHHHHHHhhhhc-ccchhhhhe-------EEE
Confidence 9999999999999999999999999 999999999982 222334455788999999 778888874 889
Q ss_pred cccc--cCChhhHHHHHHHHhhhccccccccCCCCceEEEeccCCCc
Q 015754 318 MYRG--DVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHFCNIIK 362 (401)
Q Consensus 318 ~~RG--~~~~~~i~~~~~~~k~~~~~~fv~W~p~~~k~~i~~~~p~~ 362 (401)
++|| +++++|+++++..++.+. + +|.++++|+|..||.+
T Consensus 260 ~i~G~~dl~~~ev~~a~~~I~~~~-----~-~~~~i~~G~~~~~~~~ 300 (338)
T 2r75_1 260 TIWTSEDIPYDIVDEVMERIHSKV-----H-PEAEIIFGAVLEPQEQ 300 (338)
T ss_dssp EEEECTTSCTTHHHHHHHHHHHHS-----C-TTCEEEEEEEECTTCC
T ss_pred EEEcCCCCCHHHHHHHHHHHHHhc-----C-CCCcEEEEEEeCCCCC
Confidence 9999 899999999999998765 3 7999999999999875
No 11
>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=9e-46 Score=369.95 Aligned_cols=288 Identities=15% Similarity=0.214 Sum_probs=247.9
Q ss_pred EeEEEEecCCchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCCccccccccCCCCCCccceeeeCCCCccccccccc
Q 015754 2 REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTG 81 (401)
Q Consensus 2 rEIItiq~Gq~GnqIG~~fW~~~~~E~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~PRailvD~e~~~i~~i~~~ 81 (401)
.+|++|++|||||++++++|+ |++. | .+.+.+|+|...++.+.
T Consensus 12 ~~I~vIGvGg~G~n~vn~m~~-----~gi~---------------------------g---v~fia~NTD~q~L~~~~-- 54 (394)
T 2vaw_A 12 AVIKVIGVGGGGGNAVNHMAK-----NNVE---------------------------G---VEFICANTDAQALKNIA-- 54 (394)
T ss_dssp CCEEEEEEHHHHHHHHHHHHT-----TTCC---------------------------S---EEEEEEESCTTTTSSCS--
T ss_pred CEEEEECcCchHHHHHHHHHH-----cCCC---------------------------C---CCEEEecCCHHHHhcCC--
Confidence 479999999999999999997 3331 1 36789999988776543
Q ss_pred ccccccCCceeeecc-----ccccCCCCCCccccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHH
Q 015754 82 SYRQLFHPEQLISGK-----EDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLER 156 (401)
Q Consensus 82 ~~~~~f~~~~~i~~~-----~g~gnnwa~G~~~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~ 156 (401)
.|+.+..|+ .|+||||+. |++..++.+|.||+++|.|| +|+++||+|||||||+++.|++.
T Consensus 55 ------a~~ki~iG~~~t~G~GAG~n~~~-----G~~~aee~~d~I~~~le~~d---~~fI~asmGGGTGSG~ap~lae~ 120 (394)
T 2vaw_A 55 ------ARTVLQLGPGVTKGLGAGANPEV-----GRQAALEDRERISEVLEGAD---MVFITTGMGGGTGTGAAPIIAEV 120 (394)
T ss_dssp ------SSCEEECCHHHHSSSCCCSCHHH-----HHHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHHH
T ss_pred ------CCcEEEccccccCCCCCCCCHHH-----HHHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHHH
Confidence 355666654 589999985 57889999999999999998 59999999999999999999999
Q ss_pred hhhhhCCcceEEEEEecCCCCCccchhhhHHHHHHHHHHhhcccchhcchHHHHHhhhccCCCCCCChhhhHHHHHHHHh
Q 015754 157 LSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRLISQIIS 236 (401)
Q Consensus 157 L~deyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~~ia~~i~ 236 (401)
++ ||+ +.+++|+|.+...|..+++||+.+++++|.+++|++|++||++|+++|.+.+.+. ++|..+|++|++.++
T Consensus 121 ~k-e~g---~ltvsVv~~Pf~~Eg~~r~ynA~~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~li~~~v~ 195 (394)
T 2vaw_A 121 AK-EMG---ILTVAVVTRPFPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLL-AAFAKADDVLAGAVR 195 (394)
T ss_dssp HH-HHT---CEEEEEEEECCGGGHHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHH-HHHHHHHHHHHHHHH
T ss_pred HH-HcC---CcEEEEecCCcccccchhhHHHHHHHHHHHHhCCEEEEEecHHHHHHhhcCCChH-HHHHHHHHHHHHHHH
Confidence 99 673 5566666555556889999999999999999999999999999999999888887 589999999999999
Q ss_pred hcccccccCCCCccchhhhccccccCCccccccccCccccccccccccccCHHHHHHHhcCCCCCccccCCCCCceeccc
Q 015754 237 SLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSSMMAKCDPRHGKYMACC 316 (401)
Q Consensus 237 ~~t~~~Rf~g~~n~~l~~l~~nLvp~p~l~fl~~s~~P~~~~~~~~~~~~t~~~l~~~~f~~~~~~~~~~~~~~~~ls~~ 316 (401)
++|.++||||.+|.|+.++.++|+| |+++++..+++. ...++.++++++|+ +++|.+||++.++|+.++
T Consensus 196 ~it~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~---------g~~rv~ea~~~A~~-spLl~~~d~~~ak~~lv~ 264 (394)
T 2vaw_A 196 GISDIIKRPGMINVDFADVKTVMSE-MGMAMMGTGCAS---------GPNRAREATEAAIR-NPLLEDVNLQGARGILVN 264 (394)
T ss_dssp HHHHHHHSBCSSCCCHHHHHHHHTT-TCCBEEEEEEEC---------STTHHHHHHHHHHT-CGGGTTCCTTTCSEEEEE
T ss_pred HHHHHhcCCCcccccHHHHHHhccC-CCceeEEEEecc---------ccchHHHHHHHHHh-cCccCCCCccccceeEEE
Confidence 9999999999999999999999999 889888877653 12368899999999 667777999999999999
Q ss_pred ccccccCChhhHHHHHHHHhhhccccccccCCCCceEEEeccCCCc
Q 015754 317 LMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHFCNIIK 362 (401)
Q Consensus 317 ~~~RG~~~~~~i~~~~~~~k~~~~~~fv~W~p~~~k~~i~~~~p~~ 362 (401)
+++||+++++|+++++..++.+.. .+.++++|+|..||.+
T Consensus 265 i~~~~dl~~~ev~~a~~~I~~~~~------~~a~i~~G~~~d~~~~ 304 (394)
T 2vaw_A 265 ITAGPDLSLGEYSDVGNIIEQFAS------EHATVKVGTVIDADMR 304 (394)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHSC------TTSEEEEEEEECSSCC
T ss_pred EEeCCCCCHHHHHHHHHHHHHhcC------CCCCEEEEeecCCCCC
Confidence 999999999999999999987654 2678999999888764
No 12
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*
Probab=100.00 E-value=1.3e-45 Score=367.44 Aligned_cols=287 Identities=14% Similarity=0.200 Sum_probs=245.5
Q ss_pred EeEEEEecCCchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCCccccccccCCCCCCccceeeeCCCCccccccccc
Q 015754 2 REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTG 81 (401)
Q Consensus 2 rEIItiq~Gq~GnqIG~~fW~~~~~E~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~PRailvD~e~~~i~~i~~~ 81 (401)
.+|..|++||||+++++++|+. ++. + .+.+++|+|...++.+..
T Consensus 12 ~~I~vIGvGg~G~navn~m~~~-----gi~---------------------------g---v~fia~NTD~q~L~~~~a- 55 (382)
T 2vxy_A 12 ASIKVIGVGGGGNNAVNRMIEN-----EVQ---------------------------G---VEYIAVNTDAQALNLSKA- 55 (382)
T ss_dssp CCEEEEEEHHHHHHHHHHHHHT-----TCC---------------------------S---CEEEEEESBHHHHHTCCC-
T ss_pred CEEEEEeeCchHHHHHHHHHHh-----CCC---------------------------C---CCEEEEeCCHHHHhcCCC-
Confidence 4699999999999999999983 321 1 567999999887766542
Q ss_pred ccccccCCceeeec-----cccccCCCCCCccccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHH
Q 015754 82 SYRQLFHPEQLISG-----KEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLER 156 (401)
Q Consensus 82 ~~~~~f~~~~~i~~-----~~g~gnnwa~G~~~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~ 156 (401)
|+.+..| ..|+||||+. |+++.|+.+|.||+++|.|| +|+++||+|||||||+++.|++.
T Consensus 56 -------~~ki~iG~~~t~G~GAGnn~a~-----G~e~aee~~d~Ir~~le~~D---~ffI~asmGGGTGSG~apvla~~ 120 (382)
T 2vxy_A 56 -------EVKMQIGAKLTRGLGAGANPEV-----GKKAAEESKEQIEEALKGAD---MVFVTAGMGGGTGTGAAPVIAQI 120 (382)
T ss_dssp -------SEEEECCHHHHTTBCCTTCHHH-----HHHHHHHTHHHHHHHHTTCS---EEEEEEESSSSHHHHHHHHHHHH
T ss_pred -------CcEEEecccccCCCCCCCChHH-----HHHHHHHHHHHHHHHHhhCC---EEEEEeccCCCCCCcHHHHHHHH
Confidence 3445554 3599999995 58899999999999999998 49999999999999999999998
Q ss_pred hhhhhCCcceEEEEEecCCCCCccchhhhHHHHHHHHHHhhcccchhcchHHHHHhhhccCCCCCCChhhhHHHHHHHHh
Q 015754 157 LSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRLISQIIS 236 (401)
Q Consensus 157 L~deyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~~ia~~i~ 236 (401)
++| |+ +++++|+|.+...|.++++||+.+++++|.+++|++|++||++|+++|.+.+.+. ++|.++|++|++.++
T Consensus 121 ake-~g---~ltvsVvt~Pf~~Eg~~r~~nA~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~ll~~~vs 195 (382)
T 2vxy_A 121 AKD-LG---ALTVGVVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPML-EAFREADNVLRQGVQ 195 (382)
T ss_dssp HHH-TT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHSCTTCCHH-HHHHHHHHHHHHHHH
T ss_pred HHH-hC---CCeEEEEeCCcccccchhHHHHHHHHHHHHHhCCEEEEEccHHHHHHHHhcCCHH-HHHHHHHHHHHHHHH
Confidence 875 85 5566666665557899999999999999999999999999999999999888887 589999999999999
Q ss_pred hcccccccCCCCccchhhhccccccCCccccccccCccccccccccccccCHHHHHHHhcCCCCCccccCCCCCceeccc
Q 015754 237 SLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSSMMAKCDPRHGKYMACC 316 (401)
Q Consensus 237 ~~t~~~Rf~g~~n~~l~~l~~nLvp~p~l~fl~~s~~P~~~~~~~~~~~~t~~~l~~~~f~~~~~~~~~~~~~~~~ls~~ 316 (401)
++|.++||||.+|.|+.++.++|+| |++||+..+++.- .....++++++|+ ++|+.||++.++|+.++
T Consensus 196 gIt~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~~--s~ll~~d~~~ak~~l~~ 263 (382)
T 2vxy_A 196 GISDLIATPGLINLDFADVKTIMSN-KGSALMGIGIATG---------ENRAAEAAKKAIS--SPLLEAAIDGAQGVLMN 263 (382)
T ss_dssp HHHTTTSSCCTTCCCHHHHHHHTTC-SSEEEEEEEEEES---------TTHHHHHHHHHHT--CTTSCSCGGGCSEEEEE
T ss_pred HHHHHHcCCCccccCHHHHHHhccC-CCceEEEEEeccc---------ccHHHHHHHHHHh--CcCcCCChhhcceeEEE
Confidence 9999999999999999999999999 9999998887631 2347889999996 46788999999999887
Q ss_pred ccccccCChhhHHHHHHHHhhhccccccccCCCCceEEEeccCCCc
Q 015754 317 LMYRGDVVPKDVNTAVATIKTKRAVQFVDWCPTGFKCGIHFCNIIK 362 (401)
Q Consensus 317 ~~~RG~~~~~~i~~~~~~~k~~~~~~fv~W~p~~~k~~i~~~~p~~ 362 (401)
+..+++++++|+++++..++.+.. .+.++++|+|..+|..
T Consensus 264 i~gg~dl~~~ev~~a~~~I~~~~~------~~a~ii~G~~~d~~~~ 303 (382)
T 2vxy_A 264 ITGGTNLSLYEVQEAADIVASASD------QDVNMIFGSVINENLK 303 (382)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHSC------TTCEEEEEEEECTTCS
T ss_pred EEeCCCCCHHHHHHHHHHHHHhcC------CCCCEEEEeecCCCCC
Confidence 777779999999999999987654 4778999999888764
No 13
>3m89_A FTSZ/tubulin-related protein; partition, TUBZ, GTP-binding, nucleotide-BIND structural protein; HET: GSP; 2.00A {Bacillus thuringiensis} PDB: 3m8k_A 2xka_A* 2xkb_A*
Probab=100.00 E-value=3.4e-40 Score=327.93 Aligned_cols=285 Identities=14% Similarity=0.095 Sum_probs=226.5
Q ss_pred EEEEecCCchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCCccccccccCCCCCCccceeeeCCCCccccccccccc
Q 015754 4 IISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSY 83 (401)
Q Consensus 4 IItiq~Gq~GnqIG~~fW~~~~~E~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~PRailvD~e~~~i~~i~~~~~ 83 (401)
|..|.+||+|+.+.+++.+. + -.+++|.||+|+||+|+..++.++.++.
T Consensus 45 i~VIGvGg~G~n~v~~m~~~-----~--------------------------~~~g~~~~~~iavNtd~~dl~~L~~~~~ 93 (427)
T 3m89_A 45 WGVIGAGQKGNKEADLFAGY-----K--------------------------FSNGTTCYPTLAVNFAESDMMHLQNIIK 93 (427)
T ss_dssp EEEEEEHHHHHHHHHHHTTC-----B--------------------------CTTSCBSCCEEEEESSGGGGTTCSSSCG
T ss_pred EEEEEECCcHHHHHHHHHHh-----C--------------------------cccCCcCceEEEEECCHHHHHHHhcCCC
Confidence 67899999999999987432 0 0135789999999999999999887763
Q ss_pred ccccCCcee-eeccccccCCCCCCccccc-----hhh--HHHHHHHHHHHhh---hcCCccceeEEEecCCCccCCchHH
Q 015754 84 RQLFHPEQL-ISGKEDAANNFARGHYTVG-----REI--VDLCLDRVRKLAD---NCTGLQGFLVFSAVGGGTGSGLGSL 152 (401)
Q Consensus 84 ~~~f~~~~~-i~~~~g~gnnwa~G~~~~G-----~~~--~d~~~d~iR~~~E---~cD~lqgf~~~~sl~GGtGSG~gs~ 152 (401)
++.+ +.|+.|+|+||+.|++..| .+. .|++++.||+.+| .||.+|+|+++||+|||||||+|+.
T Consensus 94 -----~~~i~l~G~~GAG~np~~G~~~ag~~~~~~e~~~~d~I~~~I~~~~e~~~~cd~~d~f~I~aglGGGTGSG~gp~ 168 (427)
T 3m89_A 94 -----EDRIHFDGLKGAARTPSVVTDLFDPETNPNANGYLDKLAQELGRKFTNEEGEVIVDQFLICLGAGGGVGTGWGSL 168 (427)
T ss_dssp -----GGEEEC-----------CHHHHHSSSSSTTHHHHHHHHHHHHHHHSBCTTSCBCCSEEEEEEETTSHHHHHHHHH
T ss_pred -----cceEEecCCCCCCCCHHHHHHHhhcccCcccchHHHHHHHHHHHHhhccccCCCCCEEEEeeecCCCccccHHHH
Confidence 4454 5688999999999999884 554 9999999999999 8899999999999999999999999
Q ss_pred HHHHhhhhhCCcceEEEEEecCCCCCccchhhhHHHHHHHHH---Hh------------hcccchhcchHHHHHhhhccC
Q 015754 153 LLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSL---LE------------HTDVAVLLDNEAIYDICRRSL 217 (401)
Q Consensus 153 lle~L~deyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L---~e------------~sd~vi~~dN~al~~~~~~~l 217 (401)
|++.++++|+++++++++++|++. + .++||+++++++| .+ ++|++|++||++|.+++.+..
T Consensus 169 la~~lke~~~~~~~~~vvt~P~~~--e--~~~~NA~~~l~~L~~L~~~~~~~~~~~~~~~~D~vividNe~l~~i~~~~~ 244 (427)
T 3m89_A 169 VLQLIREQFFPCPVSMLISLPSGD--P--DEINNALVLLSEIDEFMREQDRLFGNSDIKPLANVIVNDNTQMQRIIESQK 244 (427)
T ss_dssp HHHHHHTTCSSSCEEEEEEECCSC--H--HHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSEEEEEEEEHHHHHHHHHHSS
T ss_pred HHHHHHHhcCCCcEEEEEEECCCC--c--cHHHHHHHHHHHHHHHhhhhcccccccccccccEEEEEehHHHHHHHhhcc
Confidence 999999999999999999999974 2 3569999999997 44 999999999999988775443
Q ss_pred C--CC---CCChh-hhHHHHHHHHhhccccc-c-cCCCCccchhhhccccccCCccccccccCccccccccccccccCHH
Q 015754 218 D--IE---RPNYT-NLNRLISQIISSLTTSL-R-FDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVP 289 (401)
Q Consensus 218 ~--~~---~~~~~-~~N~~ia~~i~~~t~~~-R-f~g~~n~~l~~l~~nLvp~p~l~fl~~s~~P~~~~~~~~~~~~t~~ 289 (401)
. .. .++|. .+|++|++.+++++... | +||.+|.|++++.++|+|.|+ |++.++++..... ..++.
T Consensus 245 ~~~~~~~~~~af~~~aN~~Ia~~I~~I~~~i~~~~~G~iNvD~aDv~t~L~~~~G--~a~iG~a~~~~~d-----~~~~~ 317 (427)
T 3m89_A 245 GTKDLKNRYVNWKEVANDNVVSTLHEINIIPENYGSDNVTYDPSDLIKLLSIPGR--FLTIGKARIAKFD-----LHSLE 317 (427)
T ss_dssp CSSSCCCSCSCHHHHHHHHHHHHHHHHHHHHHHCCCSSSCCCHHHHHHHHHSSCS--EEEEEEEEECSCS-----HHHHH
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCCcEeecHHHHHHhCCCCCC--eEEEEEecccccc-----hhhHH
Confidence 2 22 24899 89999999999999854 5 799999999999999999998 7778888865432 12467
Q ss_pred HHHHHhcCCCCCccccCCCCCceecccccccccCChhhHHHHHHHH
Q 015754 290 EITSAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVATI 335 (401)
Q Consensus 290 ~l~~~~f~~~~~~~~~~~~~~~~ls~~~~~RG~~~~~~i~~~~~~~ 335 (401)
+.+++.|+++++++.+|++.+++++++++..=+....+..+.+.++
T Consensus 318 ~ai~~al~~~~Ll~~~d~~~Ak~~lv~i~g~~~~~~~~~~~~~~~~ 363 (427)
T 3m89_A 318 NSIKRSLDEGFFSAEHQFETATMYGGFVLRPSNADFFKDVNTENRI 363 (427)
T ss_dssp HHHHHHHHSSTTCSCCCGGGCCEEEEEEEEESSCGGGGCHHHHHHH
T ss_pred HHHHHHHhCCCcccccCcccccEEEEEEEeCchhhhhhhHHHHHHH
Confidence 8899999999999999999999999998876565554544444443
No 14
>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A*
Probab=99.98 E-value=1.5e-32 Score=271.14 Aligned_cols=267 Identities=13% Similarity=0.217 Sum_probs=213.5
Q ss_pred EEEEecCCchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCCccccccccCCCCCCccceeeeCCCCccccccccccc
Q 015754 4 IISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSY 83 (401)
Q Consensus 4 IItiq~Gq~GnqIG~~fW~~~~~E~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~PRailvD~e~~~i~~i~~~~~ 83 (401)
|..|.+|++|+.+-++..+. ++. + ...|.+++|...+....
T Consensus 20 IkVIGVGG~G~NaVn~m~~~-----~~~---------------------------g---vefiaiNTD~qaL~~s~---- 60 (396)
T 4dxd_A 20 LKVIGVGGGGNNAVNRMIDH-----GMN---------------------------N---VEFIAINTDGQALNLSK---- 60 (396)
T ss_dssp EEEEEEHHHHHHHHHHHHHH-----CCC---------------------------S---EEEEEEESCHHHHHTCC----
T ss_pred EEEEEECCcHHHHHHHHHHh-----CCC---------------------------C---ceEEEEECCHHHHhcCC----
Confidence 67899999999998887654 110 1 23488888877664332
Q ss_pred ccccCCceeeecc-----ccccCCCCCCccccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHhh
Q 015754 84 RQLFHPEQLISGK-----EDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLS 158 (401)
Q Consensus 84 ~~~f~~~~~i~~~-----~g~gnnwa~G~~~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L~ 158 (401)
-+..+..|. .|+||||+. |++..++.+|.||+.+|.|| +|+++||+|||||||+++.|++ +.
T Consensus 61 ----a~~ki~lG~~~t~GlGAG~np~v-----G~eaaee~~d~Ir~~le~~D---~ffItagmGGGTGSGaapvIae-ia 127 (396)
T 4dxd_A 61 ----AESKIQIGEKLTRGLGAGANPEI-----GKKAAEESREQIEDAIQGAD---MVFVTSGMGGGTGTGAAPVVAK-IA 127 (396)
T ss_dssp ----CSEEEECCHHHHTTSCCTTCHHH-----HHHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-HH
T ss_pred ----CccEEEcCccccCCCCCCCChHH-----HHHHHHHHHHHHHHHHcCCC---EEEEEeccCCCccccHHHHHHH-HH
Confidence 233444443 488999775 57899999999999999999 4999999999999999998766 55
Q ss_pred hhhCCcceEEEEEecCCCCCccchhhhHHHHHHHHHHhhcccchhcchHHHHHhhhccCCCCCCChhhhHHHHHHHHhhc
Q 015754 159 VDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRLISQIISSL 238 (401)
Q Consensus 159 deyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~~ia~~i~~~ 238 (401)
.||+ +++++|+|.|...|..+++||+++++++|.+++|++|++||++|+++|.+.+.+.. +|..+|++|+++++++
T Consensus 128 ke~g---~LtvsVVt~Pf~~Eg~~r~yNA~lgl~~L~e~vD~vIvIdNeaL~~I~~~~l~i~~-af~~aN~ll~q~VsgI 203 (396)
T 4dxd_A 128 KEMG---ALTVGVVTRPFSFEGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMME-AFKEADNVLRQGVQGI 203 (396)
T ss_dssp HHTT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHSSEEEEEEGGGGGGTCCTTCCHHH-HHHHHHHHHHHHHHHH
T ss_pred HhcC---CceEEEEeCCccccchHHHHHHHHHHHHHHhhCCEEEEEcCHHHHHhhcccccHHH-HHHHHHHHHHHHHHhh
Confidence 6775 57788877776678899999999999999999999999999999999988888875 9999999999999999
Q ss_pred ccccccCCCCccchhhhccccccCCccccccccCccccccccccccccCHHHHHHHhcCCCCCccccCCCCCceeccccc
Q 015754 239 TTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITSAVFEPSSMMAKCDPRHGKYMACCLM 318 (401)
Q Consensus 239 t~~~Rf~g~~n~~l~~l~~nLvp~p~l~fl~~s~~P~~~~~~~~~~~~t~~~l~~~~f~~~~~~~~~~~~~~~~ls~~~~ 318 (401)
|.++||||.+|.|+.++.++|.+. ...++....++-.. ...+.+.+.++ +.++..+....+.+...+.
T Consensus 204 T~~irfpG~iNvDfaDv~t~m~~~-G~A~mG~G~a~G~~---------ra~~A~~~Ai~--sPLL~~~i~gAkgvLvnIt 271 (396)
T 4dxd_A 204 SDLIAVSGEVNLDFADVKTIMSNQ-GSALMGIGVSSGEN---------RAVEAAKKAIS--SPLLETSIVGAQGVLMNIT 271 (396)
T ss_dssp HHHHHSCCTBCCCHHHHHHHHTTC-EECEEEEEEEESTT---------HHHHHHHHHHC--CSSCSSCSTTCCEEEEEEE
T ss_pred hhhhccCCcccCCHHHHHHHhhcC-CeEEEEEEeccCCc---------hHHHHHHHHHh--CccccCChhhhcceEEEEE
Confidence 999999999999999999999987 67777777665321 13444444443 3455677777777777666
Q ss_pred ccccCChhhHHHHHHHHhhh
Q 015754 319 YRGDVVPKDVNTAVATIKTK 338 (401)
Q Consensus 319 ~RG~~~~~~i~~~~~~~k~~ 338 (401)
...+++..|+++++..++.+
T Consensus 272 gg~dl~l~Ev~~~~~~i~~~ 291 (396)
T 4dxd_A 272 GGESLSLFEAQEAADIVQDA 291 (396)
T ss_dssp ECTTCCHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHH
Confidence 66789999999998777653
No 15
>3v3t_A Cell division GTPase FTSZ, diverged; TUBZ, tubulin/FTSZ related, rossmann fold, GTP bindi structural protein; 2.30A {Clostridium botulinum C}
Probab=99.97 E-value=9.3e-32 Score=262.98 Aligned_cols=195 Identities=16% Similarity=0.219 Sum_probs=160.7
Q ss_pred EEEEecCCchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCCccccccccCCCCCCccceeeeCCCCccccccccccc
Q 015754 4 IISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSY 83 (401)
Q Consensus 4 IItiq~Gq~GnqIG~~fW~~~~~E~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~PRailvD~e~~~i~~i~~~~~ 83 (401)
|..|.+|++|+.+.+++.+. +. + -..|+++++...+..+..-
T Consensus 7 I~VIGvGGaG~Nav~~m~~~-----~~----------------------------~---v~~iaiNTD~q~L~~~~~~-- 48 (360)
T 3v3t_A 7 IVFAPIGQGGGNIVDTLLGI-----CG----------------------------D---YNALFINTSKKDLDSLKHA-- 48 (360)
T ss_dssp EEEEEBSHHHHHHHHHHHHH-----CT----------------------------T---SEECEEESCHHHHHTCSSC--
T ss_pred EEEEEeCCcHHHHHHHHHHc-----CC----------------------------C---ceEEEEECCHHHHhhCCCC--
Confidence 77899999999999998764 00 0 1457888888776554321
Q ss_pred ccccCCceeeeccccccCCCCCCccccchhhHHHHH-HHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHhhhhhC
Q 015754 84 RQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCL-DRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSVDYG 162 (401)
Q Consensus 84 ~~~f~~~~~i~~~~g~gnnwa~G~~~~G~~~~d~~~-d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L~deyp 162 (401)
+.+.++....|+|+||..| ++..++.. |.||+.+|+|+.+|||+++||+|||||||+++.|++.|+++||
T Consensus 49 ----~~ki~ig~GlGAG~np~vG-----~eaaee~~~d~Ir~~le~c~g~dgffI~aslGGGTGSG~~pvLae~lke~~~ 119 (360)
T 3v3t_A 49 ----KHTYHIPYAEGCGKERKKA-----VGYAQTYYKQIIAQIMEKFSSCDIVIFVATMAGGAGSGITPPILGLAKQMYP 119 (360)
T ss_dssp ----SCEEECC------CCHHHH-----HHHHGGGHHHHHHHHHHHTTTCSEEEEEEETTSHHHHHHHHHHHHHHHHHCT
T ss_pred ----ccEEEcCCCCCCCCCHHHH-----HHHHHHhHHHHHHHHHhcCCCCCeEEEeeccCCCccccHHHHHHHHHHHhCC
Confidence 1112233346899998775 67888888 9999999999999999999999999999999999999999999
Q ss_pred CcceEEEEEecCCCCCccchhhhHHHHHHHHHHh---hcccc--hhcchHHHHHhhhccCCCCCCChhhhHHHHHHHHhh
Q 015754 163 KKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLE---HTDVA--VLLDNEAIYDICRRSLDIERPNYTNLNRLISQIISS 237 (401)
Q Consensus 163 ~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e---~sd~v--i~~dN~al~~~~~~~l~~~~~~~~~~N~~ia~~i~~ 237 (401)
++++..++|+|++. +.+++|||+++++++|.+ ++|.+ |++||++ .++|.++|++||+++++
T Consensus 120 ~k~v~~vtV~Pf~~--Egvv~pyNA~l~l~~L~e~sD~vD~lcvividNea------------~~ay~~lN~lIaq~vs~ 185 (360)
T 3v3t_A 120 NKHFGFVGVLPKAT--EDIDEHMNAIACWNDIMRSTNEGKDISIYLLDNNK------------REKESDINKEFATLFND 185 (360)
T ss_dssp TSEEEEEEEECCTT--SCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEEGGG------------SSSHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEeCCCc--cchhhHHHHHHHHHHHHhhhccCCceEEEEEeCCC------------chhHHHHHHHHHHHHHH
Confidence 99999999999985 579999999999999999 55555 9999998 47899999999999999
Q ss_pred cccccccCCCCccchhhhcccc
Q 015754 238 LTTSLRFDGAINVDITEFQTNL 259 (401)
Q Consensus 238 ~t~~~Rf~g~~n~~l~~l~~nL 259 (401)
+|.++||+|.+|.|+.++.+-+
T Consensus 186 lt~~l~~~G~iNVDfaDv~tvm 207 (360)
T 3v3t_A 186 FMNMSESHAEGVVDEDEISKLL 207 (360)
T ss_dssp HHGGGSCCSSCCCCHHHHHHHH
T ss_pred HHHhhccCCceeeeHHHHHHHH
Confidence 9999999999999999995443
No 16
>4ei7_A Plasmid replication protein REPX; GTP hydrolase, plasmid segregation; HET: GDP; 1.90A {Bacillus cereus} PDB: 4ei8_A 4ei9_A*
Probab=99.71 E-value=1.2e-17 Score=167.17 Aligned_cols=219 Identities=15% Similarity=0.134 Sum_probs=155.2
Q ss_pred EEEEecCCchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCCccccccccCCCCCCccceeeeCCCCccccccccccc
Q 015754 4 IISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSY 83 (401)
Q Consensus 4 IItiq~Gq~GnqIG~~fW~~~~~E~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~PRailvD~e~~~i~~i~~~~~ 83 (401)
|..|.+||||+.|-+.|.+. .. +.+...+..++|+|+++...+..+...
T Consensus 18 i~vIGvGgaG~~ivd~~~~~-----~~------------------------~~~~~~~~~~~iaiNTd~~~L~~~~~~-- 66 (389)
T 4ei7_A 18 FGFLGLGMGGCAIAAECANK-----ET------------------------QIKNNKYPYRAILVNTNSQDFNKIEIK-- 66 (389)
T ss_dssp EEEEEEHHHHHHHHHHHHTC-----CC------------------------CCTTCSCCCEEEEEECCCHHHHHSCCC--
T ss_pred EEEEEECCchHHHHHHHHhc-----cc------------------------ccccccccccEEEEECCHHHHhhccCc--
Confidence 56799999999999998643 10 011123556899999999877655321
Q ss_pred ccccCCceeeecc--ccccCCCCCCccccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHhhhhh
Q 015754 84 RQLFHPEQLISGK--EDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSVDY 161 (401)
Q Consensus 84 ~~~f~~~~~i~~~--~g~gnnwa~G~~~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L~dey 161 (401)
........++.. .|+|+||..|+ ...+|..+++.+.|+..++.+|. +++++++|||||+|.++.+++.+++.
T Consensus 67 -~~~~~g~~~~~g~g~GaG~~p~~G~-~aa~e~~~~i~~~l~~~~~~~d~---vfi~ag~GGGTGtGa~pvia~~~ke~- 140 (389)
T 4ei7_A 67 -NTGNVRKIQLEGYEQGAARNPQVGE-EAFVKHETKIFEAVKQEFEDRDF---IWITCGLGGGTGTGALLKAIEMLYEH- 140 (389)
T ss_dssp -SCSSEEEEECTTCCCTTCCCHHHHH-HHHHHTHHHHHHHHHHHTTTCSE---EEEEEETTSSHHHHHHHHHHHHHHHT-
T ss_pred -chhhhhhhccCCCCCCCCCChHHHH-HHHHHHHHHHHHHHHhhcCCccE---EEEEecCCCCCccccHHHHHHHHHHc-
Confidence 112222333332 38999988883 44566777777888777777764 59999999999999999999999985
Q ss_pred CCcceEEEEEecCCCCC-ccchhhhHHHHHHHHHHhhcccchhcchHHHHHhhhccC---CCCCCChhhhHHHHHHHHhh
Q 015754 162 GKKSKLGFTIYPSPQVS-TAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSL---DIERPNYTNLNRLISQIISS 237 (401)
Q Consensus 162 p~~~i~~~~v~P~~~~~-~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l---~~~~~~~~~~N~~ia~~i~~ 237 (401)
..+...+.++|+...+ ....+.++.+..|.++.+.+|.+|++||+.|.++....- .+ ...|+..|++|++.+..
T Consensus 141 -~~~~~~vvt~Pf~~Eg~~~~~~A~~~i~~l~~~~~~vd~~ividN~~l~~~~~~~~~~~~~-~~af~~an~~l~~~v~~ 218 (389)
T 4ei7_A 141 -DYNFGLLLTLPRDAEALKVLENATSRIRSIAMNQEAFGSIVLIDNAKLYRKFEEENPSALA-NEYTSYSNKYIADALHE 218 (389)
T ss_dssp -TCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTGGGSSEEEEEEHHHHHHHHHHHCTTCCG-GGHHHHHHHHHHHHHHH
T ss_pred -CCCEEEEEEeCCCcCchHHHHHHHHHHHHHHHHhccCCeEEEeccHHHHHHHhhcCCCCCH-HHHHHHHHHHHHHHHHH
Confidence 4567778889987432 234445555555555578899999999999999875432 22 23699999999998776
Q ss_pred cccccc---cCCCCccchhhhcccccc
Q 015754 238 LTTSLR---FDGAINVDITEFQTNLVP 261 (401)
Q Consensus 238 ~t~~~R---f~g~~n~~l~~l~~nLvp 261 (401)
++.... -+|..|.|+.++.+-|--
T Consensus 219 i~~~~~~~~~~g~in~D~aDv~~vm~~ 245 (389)
T 4ei7_A 219 INLVTSSFTPFSDTHFDASEFAQVINT 245 (389)
T ss_dssp HHHHTTSSEESSSCCCCHHHHHHHHTS
T ss_pred HHHHHhCCCCCCeEEeeHHHHHHHhcC
Confidence 644332 358999999999886653
No 17
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A*
Probab=99.21 E-value=1.3e-11 Score=116.81 Aligned_cols=173 Identities=17% Similarity=0.260 Sum_probs=118.9
Q ss_pred eEEEEecCCchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCCccccccccCCCCCCccceeeeCCCCcccccccccc
Q 015754 3 EIISIHIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGS 82 (401)
Q Consensus 3 EIItiq~Gq~GnqIG~~fW~~~~~E~~i~~~g~~~~~~~~~~~~~~~~~~F~e~~~~~~~PRailvD~e~~~i~~i~~~~ 82 (401)
.|..+.+|++|+.|.+.+++. | +.+|+||++.+-+...+ .
T Consensus 4 ki~VvGvGGAG~Nii~rL~~~-----------------------------------G---a~~iAiNTD~q~L~~~k--~ 43 (315)
T 3r4v_A 4 KVCLIFAGGTGMNVATKLVDL-----------------------------------G---EAVHCFDTCDKNVVDVH--R 43 (315)
T ss_dssp SCEEEEEHHHHHHHHGGGGGG-----------------------------------G---GGEEEEESSSTTCCGGG--G
T ss_pred eEEEEEEcCcchHHHHHHHHc-----------------------------------C---CCEEEEECchHHhhhhh--h
Confidence 456788999999999876543 1 45677777777553221 1
Q ss_pred cccccCCcee-eeccccccCCCCCCccccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHhhhhh
Q 015754 83 YRQLFHPEQL-ISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSVDY 161 (401)
Q Consensus 83 ~~~~f~~~~~-i~~~~g~gnnwa~G~~~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L~dey 161 (401)
+.+-. ..+..|+|++ ...|.+..++-.+.|++.+|.+|. ++++.++|||||+|.++.+++.+++.
T Consensus 44 -----~~~~~i~~gglGAGgd-----pe~g~e~a~e~~~eI~~~l~~aD~---VFVtaGLGGGTGTGaAPVvAeiake~- 109 (315)
T 3r4v_A 44 -----SVNVTLTKGTRGAGGN-----RKVILPLVRPQIPALMDTIPEADF---YIVCYSLGGGSGSVLGPLITGQLADR- 109 (315)
T ss_dssp -----GSEEEECTTCCC---C-----HHHHHHHHGGGHHHHHHTSCCBSC---EEEEEESSSSSHHHHHHHHHHHHHHT-
T ss_pred -----hcceeeecccCCCCCC-----hHHHHHHHHhhHHHHHHhcCCCCE---EEEEeccCCccccchHHHHHHHHHHc-
Confidence 11112 3333456654 566777777777788888887665 49999999999999999999999998
Q ss_pred CCcceEEEEEecCCCCCccchhhhHHHHHHHHHHhhcccchhcchHHHHHhhhccCCCCCCChhhhHHHHHHHHhhccc
Q 015754 162 GKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRLISQIISSLTT 240 (401)
Q Consensus 162 p~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~~ia~~i~~~t~ 240 (401)
...++++++.|.+. .....-..|++-+|..|.+.+|.+|+|+ |.+. .+...++.+|+.+|..|..+..
T Consensus 110 -GalvVavVt~~~E~-~~~~~Nai~al~~LE~La~~~dt~Iv~d---~Len------~~~lp~~~lN~eia~rL~al~~ 177 (315)
T 3r4v_A 110 -KASFVSFVVGAMES-TDNLGNDIDTMKTLEAIAVNKHLPIVVN---YVPN------TQGRSYESINDEIAEKIRKVVL 177 (315)
T ss_dssp -TCCEEEEEEECCSS-HHHHHHHHHHHHHHHHHHHHHTSCEEEE---EEEC------CTTCCHHHHHHHHHHHHHHHHH
T ss_pred -CCCEEEEEecCCCc-chhhhchHHHHHHHHHHHhccCCcEEEe---cccc------CCCCchHHHHHHHHHHHHHHHH
Confidence 34677778877431 1222233447788999999999999997 3322 2345679999999998876543
No 18
>3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum}
Probab=69.93 E-value=3.5 Score=38.22 Aligned_cols=70 Identities=19% Similarity=0.183 Sum_probs=48.6
Q ss_pred CCCccccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHhhhhhCCcceEEEEEecCCCCC
Q 015754 104 ARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVS 178 (401)
Q Consensus 104 a~G~~~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L~deyp~~~i~~~~v~P~~~~~ 178 (401)
.+|++..-..+.+++.+.|++.+++.....=++.=||+||+ ++....-.|+..+|...+.. -.|-.+..+
T Consensus 96 H~GF~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGa----lA~l~a~~l~~~~~~~~v~~-~tFg~PrvG 165 (258)
T 3g7n_A 96 MRGVHRPWSAVHDTIITEVKALIAKYPDYTLEAVGHSLGGA----LTSIAHVALAQNFPDKSLVS-NALNAFPIG 165 (258)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHH----HHHHHHHHHHHHCTTSCEEE-EEESCCCCB
T ss_pred ehhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeccCHHHH----HHHHHHHHHHHhCCCCceeE-EEecCCCCC
Confidence 35555555567778888888888887666667788999874 67777778888888765543 345555443
No 19
>3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A*
Probab=64.73 E-value=5.2 Score=37.44 Aligned_cols=70 Identities=11% Similarity=0.169 Sum_probs=46.1
Q ss_pred CCCccccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHhhhhhCCcceEEEEEecCCCCC
Q 015754 104 ARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVS 178 (401)
Q Consensus 104 a~G~~~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L~deyp~~~i~~~~v~P~~~~~ 178 (401)
.+|++..-..+.+++.+.|++.+++.....=++.=||+||+ ++..++-.|+..+|...+.. -.|-.+..+
T Consensus 110 H~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~l~vtGHSLGGa----lA~l~a~~l~~~~~~~~~~~-~tfg~PrvG 179 (279)
T 3uue_A 110 MHGFQQAYNDLMDDIFTAVKKYKKEKNEKRVTVIGHSLGAA----MGLLCAMDIELRMDGGLYKT-YLFGLPRLG 179 (279)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEETHHHH----HHHHHHHHHHHHSTTCCSEE-EEESCCCCB
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEcccCHHHH----HHHHHHHHHHHhCCCCceEE-EEecCCCcC
Confidence 45555555566777888888888876666667778999774 66777777887777654433 334444433
No 20
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=61.16 E-value=5.7 Score=33.15 Aligned_cols=30 Identities=17% Similarity=0.262 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhhhcCCccceeEEEecCCCc
Q 015754 115 VDLCLDRVRKLADNCTGLQGFLVFSAVGGGT 145 (401)
Q Consensus 115 ~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGt 145 (401)
.+++.++++..+++.|. +|++++.++-|||
T Consensus 45 ~~~~~~~i~~~i~~~~~-~gvliLtDl~GGS 74 (142)
T 3bed_A 45 LSGTQAKLAAILKEAGN-VPTLVLADLXGGT 74 (142)
T ss_dssp HHHHHHHHHHHHHHHCS-CCEEEEESSTTSH
T ss_pred HHHHHHHHHHHHHhcCC-CCEEEEEECCCCH
Confidence 45678888999999999 9999999999886
No 21
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=61.04 E-value=15 Score=30.24 Aligned_cols=31 Identities=13% Similarity=0.265 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhhhcCCccceeEEEecCCCc
Q 015754 115 VDLCLDRVRKLADNCTGLQGFLVFSAVGGGT 145 (401)
Q Consensus 115 ~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGt 145 (401)
.+++.+++++.+++.|.=+|++++.++-|||
T Consensus 41 ~~~~~~~i~~~i~~~~~~~gvliLtDl~GGS 71 (135)
T 1pdo_A 41 AETLIEKYNAQLAKLDTTKGVLFLVDTWGGS 71 (135)
T ss_dssp HHHHHHHHHHHHTTSCCTTCEEEEESSTTSH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEECCCCC
Confidence 4567888999999998888999999998876
No 22
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=50.55 E-value=11 Score=31.58 Aligned_cols=31 Identities=13% Similarity=0.290 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhhhc-CCccceeEEEecCCCc
Q 015754 115 VDLCLDRVRKLADNC-TGLQGFLVFSAVGGGT 145 (401)
Q Consensus 115 ~d~~~d~iR~~~E~c-D~lqgf~~~~sl~GGt 145 (401)
.+++.++++..+++. |.=+|++++.++-|||
T Consensus 43 ~~~~~~~i~~~i~~~~~~~~gvliLtDl~GGS 74 (144)
T 3lfh_A 43 IEVVRKEVEKIIKEKLQEDKEIIIVVDLFGGS 74 (144)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEESSSSSH
T ss_pred HHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCC
Confidence 456778888888888 8788999999999987
No 23
>3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0
Probab=46.69 E-value=9.6 Score=36.03 Aligned_cols=56 Identities=13% Similarity=0.079 Sum_probs=38.4
Q ss_pred CCccccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHhhhhhCCc
Q 015754 105 RGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSVDYGKK 164 (401)
Q Consensus 105 ~G~~~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L~deyp~~ 164 (401)
+|++..-+...+++.+.|++.+++.....=++.=||+||+ ++..++-.|+...++.
T Consensus 127 ~GF~~~~~~~~~~i~~~l~~~~~~~p~~~i~vtGHSLGGa----lA~l~a~~l~~~~~~~ 182 (301)
T 3o0d_A 127 NGFIQSYNNTYNQIGPKLDSVIEQYPDYQIAVTGHSLGGA----AALLFGINLKVNGHDP 182 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHH----HHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEeccChHHH----HHHHHHHHHHhcCCCc
Confidence 4555544566777888888888876666556778999774 5666666777665443
No 24
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=46.62 E-value=31 Score=28.93 Aligned_cols=31 Identities=16% Similarity=0.205 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHhhhcCCccceeEEEecCCCc
Q 015754 115 VDLCLDRVRKLADNCTGLQGFLVFSAVGGGT 145 (401)
Q Consensus 115 ~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGt 145 (401)
.+++.++++..+++.|.=+|++++.++-|||
T Consensus 41 ~~~~~~~i~~~i~~~~~~~gvlvLtDl~GGS 71 (150)
T 3ipr_A 41 VQALGGQIKTAIENVQQGDGVLVMVDLLSAS 71 (150)
T ss_dssp HHHHHHHHHHHHHHHCSSSCEEEEESSTTSH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeCCCCC
Confidence 4567788888888888888999999999986
No 25
>1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17
Probab=45.45 E-value=12 Score=34.63 Aligned_cols=53 Identities=11% Similarity=0.188 Sum_probs=38.3
Q ss_pred CCCccccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHhhhh
Q 015754 104 ARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSVD 160 (401)
Q Consensus 104 a~G~~~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L~de 160 (401)
.+|++..-+.+.+++.+.|++..++.....=++.=|||||+ ++..++-.|++.
T Consensus 109 h~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGa----lA~l~a~~l~~~ 161 (279)
T 1tia_A 109 ELGFWSSWKLVRDDIIKELKEVVAQNPNYELVVVGHSLGAA----VATLAATDLRGK 161 (279)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCHHHH----HHHHHHHHHHhc
Confidence 56776655667778888888888777666778889999875 456666666544
No 26
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=44.05 E-value=29 Score=28.38 Aligned_cols=38 Identities=18% Similarity=0.432 Sum_probs=29.2
Q ss_pred hHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHH
Q 015754 114 IVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLL 153 (401)
Q Consensus 114 ~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l 153 (401)
-.+++.+++++.+++.|.-+|++++.++ ||=+-++..+
T Consensus 43 ~~~~~~~~i~~~i~~~d~~~GVLiL~Dm--GSp~n~a~~l 80 (130)
T 3gx1_A 43 EVKAMYEKLKQTVVKLNPVKGVLILSDM--GSLTSFGNIL 80 (130)
T ss_dssp CHHHHHHHHHHHHHTSCCTTCEEEEECS--GGGGTHHHHH
T ss_pred CHHHHHHHHHHHHHhhCCCCCEEEEEeC--CCHHHHHHHH
Confidence 3567889999999999999999999999 4433434433
No 27
>3mtq_A Putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease...; PTS system fructose IIA component; 1.70A {Klebsiella pneumoniae subsp}
Probab=42.26 E-value=13 Score=31.86 Aligned_cols=30 Identities=13% Similarity=0.173 Sum_probs=26.3
Q ss_pred HHHHHHHHHHhhhcCCccceeEEEecCCCc
Q 015754 116 DLCLDRVRKLADNCTGLQGFLVFSAVGGGT 145 (401)
Q Consensus 116 d~~~d~iR~~~E~cD~lqgf~~~~sl~GGt 145 (401)
+++.++++..+++.|.-+|++++.++-|||
T Consensus 61 ~~~~~~~~~~i~~~~~~~gVLiLtDl~GGS 90 (159)
T 3mtq_A 61 VDLTQQVEALVARFPAQDELIVITDIFAGS 90 (159)
T ss_dssp SCHHHHHHHHHHTSCTTSEEEEEESCTTSH
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEeCCCCC
Confidence 457788888999988889999999999987
No 28
>1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A*
Probab=41.75 E-value=11 Score=34.57 Aligned_cols=52 Identities=17% Similarity=0.153 Sum_probs=36.1
Q ss_pred CCCccccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHhhh
Q 015754 104 ARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSV 159 (401)
Q Consensus 104 a~G~~~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L~d 159 (401)
.+|++..-+.+.+++.+.|++..++.....=++.=||+||+ ++..++-.|+.
T Consensus 97 h~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGa----lA~l~a~~l~~ 148 (261)
T 1uwc_A 97 HGGYYIGWISVQDQVESLVKQQASQYPDYALTVTGHSLGAS----MAALTAAQLSA 148 (261)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHH----HHHHHHHHHHT
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHCCCceEEEEecCHHHH----HHHHHHHHHhc
Confidence 34555444556677888888888877666667889999875 56666666663
No 29
>3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae}
Probab=40.91 E-value=14 Score=35.39 Aligned_cols=55 Identities=18% Similarity=0.150 Sum_probs=38.0
Q ss_pred CCCccccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHhhhhhC
Q 015754 104 ARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSVDYG 162 (401)
Q Consensus 104 a~G~~~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L~deyp 162 (401)
.+|++..-..+.+++.+.|++.+++.....=++.=||+||+ ++..+.-.|+...+
T Consensus 108 H~GF~~a~~~i~~~l~~~l~~~~~~~p~~~i~vtGHSLGGA----lA~L~a~~l~~~~~ 162 (319)
T 3ngm_A 108 HSGFQNAWNEISAAATAAVAKARKANPSFKVVSVGHSLGGA----VATLAGANLRIGGT 162 (319)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHSSTTCEEEEEEETHHHH----HHHHHHHHHHHTTC
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHhhCCCCceEEeecCHHHH----HHHHHHHHHHhcCC
Confidence 45555555566778888888888877666667788999875 56666666665543
No 30
>3ct6_A PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DHAM; mixed alpha beta structure, glycerol metabolism; 1.10A {Lactococcus lactis} SCOP: c.54.1.2 PDB: 3cr3_C*
Probab=37.46 E-value=11 Score=31.06 Aligned_cols=27 Identities=22% Similarity=0.415 Sum_probs=20.5
Q ss_pred HHHHHHHHHhhhcCCccceeEEEecCCCc
Q 015754 117 LCLDRVRKLADNCTGLQGFLVFSAVGGGT 145 (401)
Q Consensus 117 ~~~d~iR~~~E~cD~lqgf~~~~sl~GGt 145 (401)
...++|+..+++.|. +|++++.++ |||
T Consensus 44 ~~~~~i~~ai~~~~~-dgVlvltDL-Ggs 70 (131)
T 3ct6_A 44 TSFDRVMNAIEENEA-DNLLTFFDL-GSA 70 (131)
T ss_dssp CCHHHHHHHHHHSSC-SEEEEEESS-GGG
T ss_pred HHHHHHHHHHHhCCC-CCEEEEEeC-CCC
Confidence 345677777777774 899999999 654
No 31
>1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A*
Probab=36.85 E-value=14 Score=34.04 Aligned_cols=53 Identities=15% Similarity=0.192 Sum_probs=36.5
Q ss_pred CCCccccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHhhhh
Q 015754 104 ARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSVD 160 (401)
Q Consensus 104 a~G~~~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L~de 160 (401)
.+|++..-+.+.+++.+.+++..++.....=+++=||+||+ ++...+..++..
T Consensus 110 h~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~GHSLGGa----lA~l~a~~l~~~ 162 (269)
T 1tib_A 110 HDGFTSSWRSVADTLRQKVEDAVREHPDYRVVFTGHSLGGA----LATVAGADLRGN 162 (269)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHH----HHHHHHHHHTTS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEecCChHHH----HHHHHHHHHHhc
Confidence 45555444566677778888887776666778889999774 566666666654
No 32
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=32.52 E-value=1.3e+02 Score=25.98 Aligned_cols=112 Identities=11% Similarity=0.036 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHhhh-cCCccce-eEEEecCCCccCCchHHHHHHhhhhhCCcceEEEEEecCCCCCccchhhhHHHHHHH
Q 015754 115 VDLCLDRVRKLADN-CTGLQGF-LVFSAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTH 192 (401)
Q Consensus 115 ~d~~~d~iR~~~E~-cD~lqgf-~~~~sl~GGtGSG~gs~lle~L~deyp~~~i~~~~v~P~~~~~~~~v~~yNt~Lsl~ 192 (401)
...+...|++.+++ .+ +|+ -++.+...|+- -++..++-.|+.+||.. --..|+|+....+.. .+-|. ....
T Consensus 25 ~~~ik~~L~~~l~~l~~--~G~~~~isgga~G~D-~~aae~vl~lk~~y~~i--~L~~v~Pf~~~~~~w-~~~~~-~~y~ 97 (181)
T 2nx2_A 25 LYYIKKAIKNRLIAFLD--EGLEWILISGQLGVE-LWAAEAAYDLQEEYPDL--KVAVITPFYEQEKNW-KEPNK-EQYE 97 (181)
T ss_dssp HHHHHHHHHHHHHHHHT--TTCCEEEECCCTTHH-HHHHHHHHTTTTTCTTC--EEEEEESSBCTTTTS-CHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHHh--CCCcEEEECCCccHH-HHHHHHHHHhccccCCc--eEEEEecccchhhCC-CHHHH-HHHH
Confidence 34455555554444 22 253 34444444432 22444455567788744 445577886543322 23333 3577
Q ss_pred HHHhhcccchhcchHHHHHhhhccCCCCCCChhhhHHHHHHHHhhccccc
Q 015754 193 SLLEHTDVAVLLDNEAIYDICRRSLDIERPNYTNLNRLISQIISSLTTSL 242 (401)
Q Consensus 193 ~L~e~sd~vi~~dN~al~~~~~~~l~~~~~~~~~~N~~ia~~i~~~t~~~ 242 (401)
.+.+.||-+..+...... ....|..-|+.+...-+.+.+-+
T Consensus 98 ~ll~~aD~v~~l~~~~y~---------~~~~~~~rn~~mvd~sD~liavy 138 (181)
T 2nx2_A 98 AVLAQADYEASLTHRPYE---------SPLQFKQKNQFFIDKSDGLLLLY 138 (181)
T ss_dssp HHHHHCSEEEESSSSBCC---------CHHHHHHHHHHHHHHSSEEEEEC
T ss_pred HHHHhCCeEEecccCCCC---------CHHHHHHHHHHHHHHCCEEEEEE
Confidence 788888887766322110 00135566776666655554433
No 33
>3b48_A Uncharacterized protein; enterococcus faecalis V583, structural genomics, PSI-2, PROT structure initiative; 2.21A {Enterococcus faecalis} SCOP: c.54.1.2
Probab=31.27 E-value=12 Score=30.99 Aligned_cols=28 Identities=14% Similarity=0.278 Sum_probs=21.9
Q ss_pred HHHHHHHHHhhhcCCccceeEEEecCCCc
Q 015754 117 LCLDRVRKLADNCTGLQGFLVFSAVGGGT 145 (401)
Q Consensus 117 ~~~d~iR~~~E~cD~lqgf~~~~sl~GGt 145 (401)
...++|+..+++.|.=+|++++.++ |||
T Consensus 49 ~~~~~i~~ai~~~~~~dgVlvltDL-Ggs 76 (135)
T 3b48_A 49 SDPMKIIDTINEADSDREFLIFADL-GSA 76 (135)
T ss_dssp CCHHHHHHHHHHSCSSCEEEEEECS-HHH
T ss_pred HHHHHHHHHHHhcCCCCCEEEEEeC-CCC
Confidence 3446677778888877899999999 654
No 34
>1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A
Probab=30.74 E-value=31 Score=31.53 Aligned_cols=51 Identities=14% Similarity=0.094 Sum_probs=33.9
Q ss_pred CCCCccccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHh
Q 015754 103 FARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERL 157 (401)
Q Consensus 103 wa~G~~~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L 157 (401)
...|++..-.++.+++.+.|++..++.....=+++=||+||+ ++..++-.|
T Consensus 107 vh~gf~~~~~~l~~~~~~~l~~~~~~~p~~~i~~~GHSLGga----lA~l~a~~l 157 (269)
T 1tgl_A 107 VHKGFLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGA----TALLCALDL 157 (269)
T ss_pred EcHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEEeeCHHHH----HHHHHHHHH
Confidence 345555555566677778888877765555567888999875 455555555
No 35
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=30.60 E-value=80 Score=30.08 Aligned_cols=76 Identities=16% Similarity=0.167 Sum_probs=49.5
Q ss_pred cchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHhhhhhCCcceEEEEEecCCCC-CccchhhhHHH
Q 015754 110 VGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQV-STAVVEPYNSV 188 (401)
Q Consensus 110 ~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L~deyp~~~i~~~~v~P~~~~-~~~~v~~yNt~ 188 (401)
...+.|.++.+.|++.+++ +..+||+++|+..- ---++..|+.+-+ .+|-.+++=+-.|.... +|...--++++
T Consensus 65 mt~~~w~~la~~I~~~~~~-~~~dG~VItHGTDT---meeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 139 (332)
T 2wlt_A 65 MNEEIWFKLAQRAQELLDD-SRIQGVVITHGTDT---LEESAYFLNLVLH-STKPVVLVGAMRNASSLSADGALNLYEAV 139 (332)
T ss_dssp CCHHHHHHHHHHHHHHHTS-TTCCEEEEECCSSS---HHHHHHHHHHHCC-CSSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc-CCCCEEEEecCchh---HHHHHHHHHHHhC-CCCCEEEECCCCCCCCCCcchHHHHHHHH
Confidence 5678888888999888764 56889999997653 2456666666554 44444455556777653 35555555555
Q ss_pred HH
Q 015754 189 LS 190 (401)
Q Consensus 189 Ls 190 (401)
..
T Consensus 140 ~~ 141 (332)
T 2wlt_A 140 SV 141 (332)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 36
>3gdw_A Sigma-54 interaction domain protein; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=29.53 E-value=52 Score=27.19 Aligned_cols=27 Identities=15% Similarity=0.234 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHhhh--cCCccceeEEEec
Q 015754 115 VDLCLDRVRKLADN--CTGLQGFLVFSAV 141 (401)
Q Consensus 115 ~d~~~d~iR~~~E~--cD~lqgf~~~~sl 141 (401)
.+++.+++++.+++ .|.-+|++++.++
T Consensus 44 ~~~~~~~i~~~i~~~~~d~g~GVLiL~Dm 72 (139)
T 3gdw_A 44 VQTMYEQLRNQVITQKESLNNGILLLTDM 72 (139)
T ss_dssp HHHHHHHHHHHHHTSTGGGTTCEEEEECS
T ss_pred HHHHHHHHHHHHHhhcCCCCCCEEEEEeC
Confidence 46788899999988 7788999999999
No 37
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=29.07 E-value=67 Score=31.05 Aligned_cols=96 Identities=14% Similarity=0.177 Sum_probs=58.7
Q ss_pred ccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHhhhhhCCcceEEEEEecCCCC-CccchhhhHH
Q 015754 109 TVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQV-STAVVEPYNS 187 (401)
Q Consensus 109 ~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L~deyp~~~i~~~~v~P~~~~-~~~~v~~yNt 187 (401)
....+.|.++.+.|++.++ ..+||+++|+..- ---++..|+.+-+..+|-.+++=+-.|.... +|...--+++
T Consensus 82 ~mt~~~w~~la~~I~~~~~---~~dG~VItHGTDT---meeTA~~Ls~~l~~~~kPVVlTGAmrP~~~~~sDg~~NL~~A 155 (358)
T 2him_A 82 DMTPEDWQHIAEDIKAHYD---DYDGFVILHGTDT---MAYTASALSFMLENLGKPVIVTGSQIPLAELRSDGQINLLNA 155 (358)
T ss_dssp GCCHHHHHHHHHHHHHHGG---GCSEEEEECCSTT---HHHHHHHHHHHEETCCSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHh---cCCeEEEecCchH---HHHHHHHHHHHHhcCCCCEEEeCCCCCCcCCCcchHHHHHHH
Confidence 3567888888888888876 3779999997653 2446666666654455545555566787653 4555555555
Q ss_pred HHHHHHHHhhcccchhcchHHHHHh
Q 015754 188 VLSTHSLLEHTDVAVLLDNEAIYDI 212 (401)
Q Consensus 188 ~Lsl~~L~e~sd~vi~~dN~al~~~ 212 (401)
+..... .+ +-.|.++=|+.++.-
T Consensus 156 v~~A~~-~~-~~GV~V~fn~~i~~a 178 (358)
T 2him_A 156 LYVAAN-YP-INEVTLFFNNRLYRG 178 (358)
T ss_dssp HHHHHH-SC-CSSEEEEETTEEEEG
T ss_pred HHHHhC-CC-CCCeEEEECCEEeec
Confidence 544332 22 234555446666543
No 38
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=28.33 E-value=94 Score=28.17 Aligned_cols=59 Identities=14% Similarity=0.270 Sum_probs=34.8
Q ss_pred HHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHhhhhhCCcceEEEEEecCC
Q 015754 116 DLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSP 175 (401)
Q Consensus 116 d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L~deyp~~~i~~~~v~P~~ 175 (401)
+-+.+.+...++.......=.-+-++|.||| .++..++..+...+|...+...++=|++
T Consensus 34 ~~~~~~l~~~l~~~~~~~~~~~VLDiG~GtG-~~~~~~l~~l~~~~~~~~v~~~~vD~S~ 92 (292)
T 2aot_A 34 EFMDKKLPGIIGRIGDTKSEIKILSIGGGAG-EIDLQILSKVQAQYPGVCINNEVVEPSA 92 (292)
T ss_dssp HHHHHTHHHHSSSTTTTCSEEEEEEETCTTS-HHHHHHHHHHHHHSTTCEEEEEEECSCH
T ss_pred HHHHHhchhHHhhccCCCCCCeEEEEcCCCC-HHHHHHHHHHHhhCCCceeeEEEEeCCH
Confidence 3344445555554432222235778888886 4566688888888876644346665653
No 39
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=27.95 E-value=82 Score=29.99 Aligned_cols=76 Identities=13% Similarity=0.106 Sum_probs=49.1
Q ss_pred ccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHhhhhhCCcceEEEEEecCCCC-CccchhhhHH
Q 015754 109 TVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQV-STAVVEPYNS 187 (401)
Q Consensus 109 ~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L~deyp~~~i~~~~v~P~~~~-~~~~v~~yNt 187 (401)
....+.|.++.+.|++.+++ +..+||+++|+..- ---++..|+.+-+ .+|-.+++=+-.|.... +|...--+++
T Consensus 62 ~mt~~~w~~la~~I~~~~~~-~~~dG~VItHGTDT---meeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~A 136 (330)
T 1wsa_A 62 EMTGKVWLKLAKRVNELLAQ-KETEAVIITHGTDT---MEETAFFLNLTVK-SQKPVVLVGAMRPGSSMSADGPMNLYNA 136 (330)
T ss_dssp GCCHHHHHHHHHHHHHHHHS-TTCCCEEEECCSSS---HHHHHHHHHHHCC-CSSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhcc-CCCCEEEEEcCcch---HHHHHHHHHHHcC-CCCCEEEeCCCCCCCCCCCchHHHHHHH
Confidence 35678888888999888765 56889999997653 2446666666544 44434445556777653 3555555555
Q ss_pred HH
Q 015754 188 VL 189 (401)
Q Consensus 188 ~L 189 (401)
+.
T Consensus 137 v~ 138 (330)
T 1wsa_A 137 VN 138 (330)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 40
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=27.29 E-value=52 Score=31.36 Aligned_cols=76 Identities=12% Similarity=0.136 Sum_probs=49.3
Q ss_pred cchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHhhhhhCCcceEEEEEecCCCC-CccchhhhHHH
Q 015754 110 VGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQV-STAVVEPYNSV 188 (401)
Q Consensus 110 ~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L~deyp~~~i~~~~v~P~~~~-~~~~v~~yNt~ 188 (401)
...+.|.++.+.|++.+++ +..+||+++|+..- ---++..|+.+-+ .+|-.+++=+-.|.... +|...--++++
T Consensus 65 mt~~~w~~la~~I~~~~~~-~~~dG~VItHGTDT---meeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 139 (327)
T 1o7j_A 65 MTGDVVLKLSQRVNELLAR-DDVDGVVITHGTDT---VEESAYFLHLTVK-SDKPVVFVAAMRPATAISADGPMNLLEAV 139 (327)
T ss_dssp CCHHHHHHHHHHHHHHHTS-TTCCEEEEECCSTT---HHHHHHHHHHHCC-CCSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc-CCCCEEEEecCchh---HHHHHHHHHHHhC-CCCCEEEeCCCCCCCCCCCchHHHHHHHH
Confidence 5678888888999888765 56889999997653 2456666666554 44434445556777653 35555555555
Q ss_pred HH
Q 015754 189 LS 190 (401)
Q Consensus 189 Ls 190 (401)
..
T Consensus 140 ~~ 141 (327)
T 1o7j_A 140 RV 141 (327)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 41
>1zq1_A Glutamyl-tRNA(Gln) amidotransferase subunit D; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: b.38.3.1 c.88.1.1
Probab=25.38 E-value=80 Score=31.45 Aligned_cols=91 Identities=21% Similarity=0.126 Sum_probs=56.6
Q ss_pred cchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHhhhhhCCcceEEEEEecCCCC-CccchhhhHHH
Q 015754 110 VGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQV-STAVVEPYNSV 188 (401)
Q Consensus 110 ~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L~deyp~~~i~~~~v~P~~~~-~~~~v~~yNt~ 188 (401)
...+.|.++.+.|++.+++ ..+||+++|+..- ---++..|+.+-+..+|-.+++=+-.|.... +|...--++++
T Consensus 149 mtp~~w~~La~~I~~~~~~--~~DG~VItHGTDT---MeeTA~~Lsl~l~~~~KPVVlTGAqrP~~~~~sDg~~NL~~Av 223 (438)
T 1zq1_A 149 MKPKHWVKIAHEVAKALNS--GDYGVVVAHGTDT---MGYTAAALSFMLRNLGKPVVLVGAQRSSDRPSSDAAMNLICSV 223 (438)
T ss_dssp CCHHHHHHHHHHHHHHHHT--TCSEEEEECCSSS---HHHHHHHHHHHEESCCSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc--CCCeEEEecCchh---HHHHHHHHHHHHhCCCCCEEEeCCCCCCCCCCcchHHHHHHHH
Confidence 5567778888888888773 6889999997653 2456666766654555555556667787653 45555555555
Q ss_pred HHHHHHHhhcccchhcchH
Q 015754 189 LSTHSLLEHTDVAVLLDNE 207 (401)
Q Consensus 189 Lsl~~L~e~sd~vi~~dN~ 207 (401)
.... ...+-..++|+++
T Consensus 224 ~~A~--~~~~GV~Vvfn~~ 240 (438)
T 1zq1_A 224 RMAT--SEVAEVMVVMHGE 240 (438)
T ss_dssp HHHT--SSBCSEEEEEESS
T ss_pred HHHc--CCCCCeEEEECCc
Confidence 4332 2334445555443
No 42
>1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A
Probab=25.37 E-value=59 Score=29.74 Aligned_cols=50 Identities=14% Similarity=0.115 Sum_probs=34.6
Q ss_pred CCCccccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHh
Q 015754 104 ARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERL 157 (401)
Q Consensus 104 a~G~~~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L 157 (401)
.+|++..-+.+.+++.+.|++..++.....=++.=||+||+ ++..++-.+
T Consensus 109 h~Gf~~~~~~~~~~~~~~l~~~~~~~~~~~i~vtGHSLGGa----lA~l~a~~~ 158 (269)
T 1lgy_A 109 HAGFLSSYEQVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGA----QALLAGMDL 158 (269)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHH----HHHHHHHHH
T ss_pred eeehhhhHHHHHHHHHHHHHHHHHHCCCCeEEEeccChHHH----HHHHHHHHH
Confidence 45555555566778888888888776666678889999875 455555555
No 43
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=22.37 E-value=35 Score=31.99 Aligned_cols=34 Identities=29% Similarity=0.447 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHH
Q 015754 115 VDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLER 156 (401)
Q Consensus 115 ~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~ 156 (401)
.+++++++|+.+++=.-+ +|+|.|+|++++..|.
T Consensus 13 r~~il~~l~~~i~~~~~i--------ig~gaGtGlsAk~~e~ 46 (286)
T 2p10_A 13 RSELVDRFQKKIRAGEPI--------IGGGAGTGLSAKSEEA 46 (286)
T ss_dssp HHHHHHHHHHHHHTTCCE--------EEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCce--------EEEecccchhhHHHHh
Confidence 478899999999876555 5677888998887664
No 44
>3ff1_A Glucose-6-phosphate isomerase; alpha beta, rossmann fold, gluconeogenesis, glycolysis, structural genomics; HET: G6Q; 1.65A {Staphylococcus aureus subsp} SCOP: c.80.1.2 PDB: 3ifs_A*
Probab=21.97 E-value=45 Score=33.33 Aligned_cols=62 Identities=21% Similarity=0.298 Sum_probs=32.9
Q ss_pred ccccCCCCCCccccchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHH-HHHhhhhhC
Q 015754 97 EDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLL-LERLSVDYG 162 (401)
Q Consensus 97 ~g~gnnwa~G~~~~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l-le~L~deyp 162 (401)
.++|++| .|++..-..+..+..++|+.++|+-. +|+-.+.-+|-| ||.+|++. .|.|+..|.
T Consensus 41 ~~~g~d~-lgwl~lp~~~~~~~l~~i~~~a~~vr--~~~~~vV~IGIG-GS~LGp~~v~eaL~~~~~ 103 (446)
T 3ff1_A 41 TGAGSDF-LGWVDLPVDYDKEEFSRIVEASKRIK--ENSDVLVVIGIG-GSYLGARAAIEMLTSSFR 103 (446)
T ss_dssp CSTTGGG-CHHHHHHHHSCHHHHHHHHHHHHHHH--HHCSEEEEECCG-GGTHHHHHHHHHHSCSSC
T ss_pred cCCCCCc-cceeeCccccCHHHHHHHHHHHHHHh--cCCCEEEEEecc-hhHHHHHHHHHHHcchhh
Confidence 3555555 66655433323344555655555421 133333445544 58999986 466776553
No 45
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=21.42 E-value=1.1e+02 Score=30.27 Aligned_cols=90 Identities=18% Similarity=0.039 Sum_probs=55.5
Q ss_pred cchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHhhhhhCCcceEEEEEecCCCC-CccchhhhHHH
Q 015754 110 VGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQV-STAVVEPYNSV 188 (401)
Q Consensus 110 ~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L~deyp~~~i~~~~v~P~~~~-~~~~v~~yNt~ 188 (401)
...+.|.++.+.|++.+++ ..+||+++|+..- ---++..|+.+- ..+|-.+++=+-.|.... +|...--++++
T Consensus 148 mtp~~w~~La~~I~~~~~~--~~DG~VItHGTDT---MeeTA~~Lsl~l-~~~KPVVlTGAqrP~~~~~sDg~~NL~~Av 221 (435)
T 2d6f_A 148 MKPEYWVETARAVYGEIKD--GADGVVVAHGTDT---MHYTSAALSFML-RTPVPVVFTGAQRSSDRPSSDASLNIQCSV 221 (435)
T ss_dssp CCHHHHHHHHHHHHHHHHT--TCSEEEEECCTTT---HHHHHHHHHHHE-ECSSCEEEECCSSCTTSTTCTHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc--CCCeEEEEcCcch---HHHHHHHHHHHh-CCCCCEEEECCCCCCCCCCcchHHHHHHHH
Confidence 4567778888888888773 6889999997653 244566666655 444545555566787653 45555555555
Q ss_pred HHHHHHHhhcccchhcchH
Q 015754 189 LSTHSLLEHTDVAVLLDNE 207 (401)
Q Consensus 189 Lsl~~L~e~sd~vi~~dN~ 207 (401)
..... ..+-..++|+++
T Consensus 222 ~~A~~--~~~GV~Vvfn~~ 238 (435)
T 2d6f_A 222 RAATS--EIAEVTVCMHAT 238 (435)
T ss_dssp HHHHS--SCCSEEEEEESS
T ss_pred HHHcC--CCCCeEEEECCc
Confidence 44322 334445555444
No 46
>1k2d_P MBP peptide, myelin basic protein peptide with 8 residue linke; MHC class II, I-AU, H-2U, autoimmune disease; HET: NDG NAG; 2.20A {Mus musculus}
Probab=21.11 E-value=23 Score=20.20 Aligned_cols=8 Identities=88% Similarity=1.298 Sum_probs=4.5
Q ss_pred CccCCchH
Q 015754 144 GTGSGLGS 151 (401)
Q Consensus 144 GtGSG~gs 151 (401)
|+|||.|+
T Consensus 16 g~gsgsgs 23 (26)
T 1k2d_P 16 GTGSGSGS 23 (26)
T ss_pred cCCCCcCc
Confidence 55666554
No 47
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=20.05 E-value=87 Score=29.92 Aligned_cols=96 Identities=17% Similarity=0.142 Sum_probs=53.6
Q ss_pred cchhhHHHHHHHHHHHhhhcCCccceeEEEecCCCccCCchHHHHHHhhhhhCCcceEEEEEecCCCC-CccchhhhHHH
Q 015754 110 VGREIVDLCLDRVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQV-STAVVEPYNSV 188 (401)
Q Consensus 110 ~G~~~~d~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~L~deyp~~~i~~~~v~P~~~~-~~~~v~~yNt~ 188 (401)
...+.+.++.+.|++.++ +..+||+++|+..- ---+++.++.+- ..+|-.+++=+..|.... +|...--++++
T Consensus 69 m~~~~~~~la~~i~~~~~--~~~dGvVItHGTDT---m~~TA~~L~~~l-~~~kPVVlTGa~rp~~~~~sDg~~NL~~Av 142 (334)
T 3nxk_A 69 MCDEIWLRLAKKIAKLFA--EGIDGVVITHGTDT---MEETAYFLNLTI-KSDKPVVLVGAMRPSTAISADGPKNLYNAV 142 (334)
T ss_dssp CCHHHHHHHHHHHHHHHH--TTCCEEEEECCSTT---HHHHHHHHHHHC-CCCSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhh--cCCCeEEEECCCch---HHHHHHHHHHHc-CCCCCEEEECCCCCCCCCCchHHHHHHHHH
Confidence 456777888888888775 67899999997653 133555555543 344444555566777643 34444444444
Q ss_pred HHHHHHHhhcccchhcchHHHHH
Q 015754 189 LSTHSLLEHTDVAVLLDNEAIYD 211 (401)
Q Consensus 189 Lsl~~L~e~sd~vi~~dN~al~~ 211 (401)
....+-.-.--.|.+.=|+.++.
T Consensus 143 ~~A~~~~a~~~GV~v~f~~~i~~ 165 (334)
T 3nxk_A 143 ALVVNKEAKNKGVMVAINDKILS 165 (334)
T ss_dssp HHHHSGGGTTSCSEEEETTEEEE
T ss_pred HHHhCcccCCCeEEEEECCEEEe
Confidence 33322111112344444555554
Done!