Query 015755
Match_columns 401
No_of_seqs 414 out of 1752
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 09:16:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015755.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015755hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 3.4E-31 7.4E-36 245.5 25.4 251 17-272 7-294 (294)
2 PRK00870 haloalkane dehalogena 100.0 4.2E-31 9.1E-36 245.8 22.4 249 18-272 19-301 (302)
3 KOG4178 Soluble epoxide hydrol 100.0 2.9E-30 6.3E-35 229.7 23.7 256 17-272 21-320 (322)
4 TIGR02240 PHA_depoly_arom poly 100.0 1.5E-30 3.3E-35 239.0 22.7 249 20-273 4-267 (276)
5 PRK03592 haloalkane dehalogena 100.0 5.6E-30 1.2E-34 237.5 25.2 253 17-273 6-290 (295)
6 PRK03204 haloalkane dehalogena 100.0 2.2E-29 4.8E-34 232.1 25.0 245 17-269 13-285 (286)
7 PLN02679 hydrolase, alpha/beta 100.0 2.7E-29 5.9E-34 238.7 25.6 249 20-272 63-357 (360)
8 TIGR03056 bchO_mg_che_rel puta 100.0 2.4E-28 5.1E-33 224.2 24.5 249 19-270 7-278 (278)
9 PLN02965 Probable pheophorbida 100.0 3.7E-29 8.1E-34 227.0 18.8 224 42-272 5-253 (255)
10 PRK10349 carboxylesterase BioH 100.0 7.2E-29 1.6E-33 225.3 20.1 229 30-271 4-255 (256)
11 PLN03084 alpha/beta hydrolase 100.0 4.7E-28 1E-32 229.5 25.2 246 22-270 109-382 (383)
12 PRK06489 hypothetical protein; 100.0 4.2E-28 9E-33 230.9 24.7 248 24-273 46-358 (360)
13 TIGR03343 biphenyl_bphD 2-hydr 100.0 4.7E-28 1E-32 223.0 24.1 237 27-270 19-281 (282)
14 PRK08775 homoserine O-acetyltr 100.0 1.8E-28 3.9E-33 231.9 20.3 254 17-273 35-340 (343)
15 PRK10673 acyl-CoA esterase; Pr 100.0 7.1E-28 1.5E-32 218.5 22.5 231 30-271 3-254 (255)
16 PLN03087 BODYGUARD 1 domain co 100.0 1.5E-27 3.2E-32 230.4 25.2 254 16-271 174-478 (481)
17 PLN02578 hydrolase 100.0 3.3E-27 7.3E-32 224.1 25.6 243 21-270 69-353 (354)
18 TIGR02427 protocat_pcaD 3-oxoa 100.0 1.5E-27 3.3E-32 214.3 21.9 237 29-270 1-251 (251)
19 TIGR03611 RutD pyrimidine util 100.0 1.9E-27 4.1E-32 215.1 20.3 239 30-270 1-256 (257)
20 PLN02385 hydrolase; alpha/beta 100.0 2.8E-27 6E-32 224.4 20.7 246 22-273 66-346 (349)
21 PLN02211 methyl indole-3-aceta 100.0 6.8E-27 1.5E-31 213.7 21.3 239 26-272 5-270 (273)
22 PRK11126 2-succinyl-6-hydroxy- 100.0 5E-27 1.1E-31 211.2 20.0 223 40-271 2-241 (242)
23 TIGR01250 pro_imino_pep_2 prol 99.9 5.7E-26 1.2E-30 208.6 24.3 246 21-270 5-288 (288)
24 PRK10749 lysophospholipase L2; 99.9 2.9E-26 6.3E-31 215.6 22.4 248 19-272 32-329 (330)
25 PRK07581 hypothetical protein; 99.9 1.1E-26 2.3E-31 219.7 19.0 249 23-272 21-336 (339)
26 TIGR01738 bioH putative pimelo 99.9 2.3E-26 5E-31 206.0 19.8 220 41-269 5-245 (245)
27 PRK00175 metX homoserine O-ace 99.9 1.7E-26 3.6E-31 221.0 19.9 251 22-273 27-375 (379)
28 TIGR01392 homoserO_Ac_trn homo 99.9 1E-26 2.2E-31 220.6 17.7 247 23-270 11-351 (351)
29 PHA02857 monoglyceride lipase; 99.9 1.1E-25 2.4E-30 206.7 23.6 244 21-272 4-273 (276)
30 KOG4409 Predicted hydrolase/ac 99.9 8.2E-26 1.8E-30 201.8 21.2 230 38-271 88-363 (365)
31 KOG2931 Differentiation-relate 99.9 1.4E-25 3E-30 194.6 21.8 261 18-285 22-319 (326)
32 PF12697 Abhydrolase_6: Alpha/ 99.9 2.1E-26 4.5E-31 203.5 14.7 212 43-264 1-228 (228)
33 PLN02298 hydrolase, alpha/beta 99.9 1.7E-25 3.6E-30 210.8 21.6 244 23-272 38-317 (330)
34 KOG1454 Predicted hydrolase/ac 99.9 6.7E-26 1.4E-30 210.3 18.0 253 19-272 26-324 (326)
35 PLN02894 hydrolase, alpha/beta 99.9 2.5E-24 5.5E-29 206.8 25.9 242 29-273 93-386 (402)
36 PRK14875 acetoin dehydrogenase 99.9 6.7E-25 1.4E-29 210.2 21.5 243 21-271 112-370 (371)
37 TIGR03695 menH_SHCHC 2-succiny 99.9 1.3E-24 2.9E-29 194.8 22.0 227 40-270 1-251 (251)
38 PF03096 Ndr: Ndr family; Int 99.9 5.4E-25 1.2E-29 194.4 18.5 247 20-275 1-282 (283)
39 TIGR01249 pro_imino_pep_1 prol 99.9 1.7E-23 3.7E-28 194.9 21.1 115 20-135 6-132 (306)
40 PLN02980 2-oxoglutarate decarb 99.9 2.4E-23 5.1E-28 228.9 24.9 241 30-273 1360-1640(1655)
41 PRK05855 short chain dehydroge 99.9 8.9E-23 1.9E-27 207.0 22.8 252 20-274 5-294 (582)
42 COG2267 PldB Lysophospholipase 99.9 1.5E-22 3.2E-27 186.1 21.6 251 18-273 10-295 (298)
43 PLN02652 hydrolase; alpha/beta 99.9 1.6E-22 3.5E-27 193.0 21.7 238 25-273 118-388 (395)
44 PLN02511 hydrolase 99.9 2.7E-22 5.8E-27 192.1 17.0 250 20-273 73-366 (388)
45 KOG2984 Predicted hydrolase [G 99.9 9.9E-23 2.1E-27 167.1 11.1 241 14-272 17-276 (277)
46 PRK06765 homoserine O-acetyltr 99.9 1.5E-21 3.2E-26 185.7 20.6 247 24-271 37-387 (389)
47 COG1647 Esterase/lipase [Gener 99.9 1.3E-20 2.9E-25 157.6 19.3 213 41-271 16-243 (243)
48 KOG2382 Predicted alpha/beta h 99.9 2.1E-20 4.6E-25 167.0 21.2 224 38-272 50-313 (315)
49 KOG1455 Lysophospholipase [Lip 99.9 7.4E-21 1.6E-25 167.1 17.4 244 23-271 33-311 (313)
50 PRK05077 frsA fermentation/res 99.9 1.6E-19 3.5E-24 173.8 23.5 226 20-272 170-412 (414)
51 TIGR01607 PST-A Plasmodium sub 99.9 5.5E-20 1.2E-24 172.7 19.8 243 25-270 5-331 (332)
52 PRK11071 esterase YqiA; Provis 99.8 2.5E-19 5.4E-24 154.3 20.7 184 41-270 2-189 (190)
53 TIGR03100 hydr1_PEP hydrolase, 99.8 9.5E-19 2.1E-23 160.1 22.4 214 39-271 25-274 (274)
54 PRK10985 putative hydrolase; P 99.8 2.7E-19 5.9E-24 167.8 18.7 230 39-272 57-320 (324)
55 COG0596 MhpC Predicted hydrola 99.8 4.9E-18 1.1E-22 152.7 21.5 245 24-270 6-280 (282)
56 PLN02872 triacylglycerol lipas 99.8 7.8E-19 1.7E-23 167.0 16.3 252 17-272 43-389 (395)
57 PRK10566 esterase; Provisional 99.8 1.3E-17 2.8E-22 150.7 22.6 202 30-271 15-247 (249)
58 PF12695 Abhydrolase_5: Alpha/ 99.8 6E-18 1.3E-22 139.5 17.1 139 42-252 1-145 (145)
59 KOG2564 Predicted acetyltransf 99.8 4.4E-19 9.4E-24 153.1 10.1 245 22-273 52-328 (343)
60 PRK13604 luxD acyl transferase 99.8 2.2E-17 4.7E-22 149.5 20.4 228 21-273 12-260 (307)
61 TIGR01836 PHA_synth_III_C poly 99.8 1.5E-17 3.3E-22 157.7 19.8 243 26-271 46-349 (350)
62 TIGR01838 PHA_synth_I poly(R)- 99.8 1.7E-17 3.6E-22 162.3 19.5 217 39-259 187-462 (532)
63 PF00561 Abhydrolase_1: alpha/ 99.8 1.3E-18 2.9E-23 154.6 10.7 198 68-266 1-229 (230)
64 PRK07868 acyl-CoA synthetase; 99.7 7.5E-16 1.6E-20 164.4 24.3 240 39-281 66-371 (994)
65 COG3208 GrsT Predicted thioest 99.7 4.4E-15 9.5E-20 127.6 20.1 216 39-271 6-235 (244)
66 PF06342 DUF1057: Alpha/beta h 99.7 9.8E-15 2.1E-19 127.8 20.4 102 30-133 23-137 (297)
67 TIGR03101 hydr2_PEP hydrolase, 99.7 2.6E-15 5.7E-20 135.1 15.1 97 40-136 25-137 (266)
68 KOG1552 Predicted alpha/beta h 99.7 1.3E-14 2.9E-19 125.5 18.3 182 40-274 60-254 (258)
69 COG2021 MET2 Homoserine acetyl 99.6 1.3E-14 2.9E-19 131.7 18.7 247 24-271 32-367 (368)
70 PRK11460 putative hydrolase; P 99.6 1.8E-14 4E-19 128.3 18.2 161 38-271 14-207 (232)
71 TIGR02821 fghA_ester_D S-formy 99.6 5.5E-14 1.2E-18 128.8 20.5 111 24-134 21-174 (275)
72 PLN02442 S-formylglutathione h 99.6 5.2E-14 1.1E-18 129.3 18.6 108 27-134 29-179 (283)
73 KOG4667 Predicted esterase [Li 99.6 9.9E-14 2.1E-18 115.7 17.3 213 37-270 30-256 (269)
74 PLN00021 chlorophyllase 99.6 6.2E-14 1.3E-18 129.7 17.0 95 37-132 49-165 (313)
75 PF00326 Peptidase_S9: Prolyl 99.6 1.1E-13 2.4E-18 121.9 17.7 183 56-272 3-209 (213)
76 COG0429 Predicted hydrolase of 99.6 6E-13 1.3E-17 119.1 20.4 232 38-272 73-340 (345)
77 KOG4391 Predicted alpha/beta h 99.5 7.5E-14 1.6E-18 116.4 11.0 207 26-275 63-285 (300)
78 PF06821 Ser_hydrolase: Serine 99.5 2.3E-13 5E-18 114.5 12.4 156 43-258 1-159 (171)
79 COG1506 DAP2 Dipeptidyl aminop 99.5 1.1E-12 2.4E-17 133.1 19.1 210 26-272 374-616 (620)
80 PF02230 Abhydrolase_2: Phosph 99.5 1.9E-12 4.1E-17 114.3 16.7 166 38-271 12-214 (216)
81 TIGR03230 lipo_lipase lipoprot 99.5 5.6E-13 1.2E-17 127.1 13.0 95 39-133 40-154 (442)
82 PF00975 Thioesterase: Thioest 99.5 2.2E-12 4.7E-17 115.0 15.2 94 41-134 1-105 (229)
83 cd00707 Pancreat_lipase_like P 99.5 5E-13 1.1E-17 121.9 11.1 106 27-133 24-147 (275)
84 TIGR01840 esterase_phb esteras 99.4 1.6E-12 3.4E-17 114.5 13.6 95 39-133 12-130 (212)
85 KOG1838 Alpha/beta hydrolase [ 99.4 2.6E-11 5.6E-16 112.7 21.6 251 18-272 93-388 (409)
86 PF01738 DLH: Dienelactone hyd 99.4 8E-12 1.7E-16 110.5 17.8 166 39-271 13-216 (218)
87 PRK10162 acetyl esterase; Prov 99.4 2.9E-11 6.3E-16 113.0 19.4 96 39-134 80-196 (318)
88 TIGR01839 PHA_synth_II poly(R) 99.4 4.9E-11 1.1E-15 115.9 21.1 97 39-135 214-330 (560)
89 COG0400 Predicted esterase [Ge 99.4 1.5E-11 3.4E-16 105.9 15.8 164 36-272 14-205 (207)
90 PF05728 UPF0227: Uncharacteri 99.4 1E-10 2.2E-15 99.6 19.2 182 43-270 2-187 (187)
91 KOG2565 Predicted hydrolases o 99.4 7.2E-12 1.6E-16 112.8 12.7 117 17-133 123-264 (469)
92 PF06500 DUF1100: Alpha/beta h 99.4 1.4E-10 3E-15 108.6 21.3 224 19-271 166-408 (411)
93 TIGR01849 PHB_depoly_PhaZ poly 99.4 1.8E-10 3.9E-15 108.9 21.9 227 41-271 103-405 (406)
94 COG2945 Predicted hydrolase of 99.3 1E-10 2.3E-15 96.4 16.0 164 36-270 24-205 (210)
95 TIGR00976 /NonD putative hydro 99.3 1.8E-10 4E-15 115.7 19.3 110 26-135 5-134 (550)
96 PF08538 DUF1749: Protein of u 99.3 4.8E-11 1E-15 107.2 11.6 117 21-137 14-152 (303)
97 PF05448 AXE1: Acetyl xylan es 99.3 6.1E-10 1.3E-14 103.3 19.3 200 39-271 82-319 (320)
98 TIGR03502 lipase_Pla1_cef extr 99.2 8.5E-11 1.8E-15 119.0 13.3 102 18-119 418-576 (792)
99 PRK10115 protease 2; Provision 99.2 1.1E-09 2.3E-14 112.2 20.6 112 25-136 424-562 (686)
100 COG3545 Predicted esterase of 99.2 3.2E-10 6.9E-15 92.5 13.2 172 41-271 3-178 (181)
101 COG0412 Dienelactone hydrolase 99.2 1.5E-09 3.3E-14 96.5 18.8 165 40-272 27-233 (236)
102 PRK10252 entF enterobactin syn 99.2 2.8E-10 6.2E-15 126.2 17.0 94 39-133 1067-1171(1296)
103 PF12740 Chlorophyllase2: Chlo 99.2 1.7E-09 3.7E-14 95.5 16.1 102 32-133 9-131 (259)
104 PF10230 DUF2305: Uncharacteri 99.1 3.9E-09 8.5E-14 95.7 17.3 94 40-133 2-122 (266)
105 COG3319 Thioesterase domains o 99.1 6.4E-09 1.4E-13 92.5 17.1 93 41-134 1-104 (257)
106 PF03959 FSH1: Serine hydrolas 99.1 1.7E-09 3.7E-14 94.9 13.0 152 40-256 4-205 (212)
107 PF09752 DUF2048: Uncharacteri 99.1 1.1E-08 2.4E-13 93.5 17.0 224 38-270 90-347 (348)
108 PF07819 PGAP1: PGAP1-like pro 99.1 1.8E-09 3.9E-14 95.3 11.6 96 39-134 3-124 (225)
109 PF12146 Hydrolase_4: Putative 99.1 1E-09 2.3E-14 79.6 8.2 67 27-93 1-79 (79)
110 COG4757 Predicted alpha/beta h 99.0 1.2E-09 2.7E-14 92.6 9.5 232 26-269 14-280 (281)
111 KOG2624 Triglyceride lipase-ch 99.0 8.5E-09 1.8E-13 97.4 15.2 119 17-135 47-201 (403)
112 COG3458 Acetyl esterase (deace 99.0 7.8E-09 1.7E-13 89.9 13.5 213 25-272 64-317 (321)
113 PRK04940 hypothetical protein; 99.0 5.7E-08 1.2E-12 81.1 17.4 170 43-270 2-178 (180)
114 PF07224 Chlorophyllase: Chlor 99.0 1.2E-08 2.7E-13 88.4 13.7 96 40-135 46-159 (307)
115 PF10503 Esterase_phd: Esteras 99.0 2.9E-08 6.2E-13 86.6 16.2 94 40-133 16-132 (220)
116 PF07859 Abhydrolase_3: alpha/ 99.0 4.8E-09 1E-13 92.1 11.4 91 43-133 1-110 (211)
117 PF06028 DUF915: Alpha/beta hy 99.0 2.6E-08 5.6E-13 88.9 16.1 191 40-269 11-252 (255)
118 PF02273 Acyl_transf_2: Acyl t 99.0 7.2E-08 1.6E-12 82.8 17.3 226 21-272 5-252 (294)
119 COG3243 PhaC Poly(3-hydroxyalk 98.9 1.5E-08 3.3E-13 93.8 13.2 232 40-274 107-401 (445)
120 COG3571 Predicted hydrolase of 98.9 1.4E-07 3.1E-12 75.5 16.5 169 42-272 16-211 (213)
121 PF06057 VirJ: Bacterial virul 98.9 3.4E-08 7.5E-13 82.6 12.6 93 42-134 4-108 (192)
122 COG0657 Aes Esterase/lipase [L 98.9 6.8E-08 1.5E-12 90.2 16.3 98 39-136 78-194 (312)
123 PF03403 PAF-AH_p_II: Platelet 98.9 9.4E-09 2E-13 97.7 10.3 93 39-132 99-261 (379)
124 PRK05371 x-prolyl-dipeptidyl a 98.9 1.5E-07 3.3E-12 97.3 18.8 76 59-134 271-374 (767)
125 KOG1515 Arylacetamide deacetyl 98.8 1.2E-07 2.5E-12 87.9 14.6 98 39-136 89-210 (336)
126 KOG2551 Phospholipase/carboxyh 98.8 3E-07 6.5E-12 78.1 15.3 164 40-272 5-220 (230)
127 KOG3975 Uncharacterized conser 98.8 8.9E-07 1.9E-11 76.3 18.3 226 39-270 28-301 (301)
128 PF02129 Peptidase_S15: X-Pro 98.8 3.4E-07 7.3E-12 83.8 16.8 109 26-134 1-137 (272)
129 PTZ00472 serine carboxypeptida 98.7 1.6E-06 3.5E-11 84.8 21.1 115 21-135 50-218 (462)
130 PF01674 Lipase_2: Lipase (cla 98.7 5.1E-08 1.1E-12 84.9 9.3 78 41-119 2-96 (219)
131 KOG4627 Kynurenine formamidase 98.7 9.8E-08 2.1E-12 79.7 9.5 185 29-257 55-252 (270)
132 PF08840 BAAT_C: BAAT / Acyl-C 98.7 5E-08 1.1E-12 85.6 8.2 150 84-253 5-163 (213)
133 smart00824 PKS_TE Thioesterase 98.7 4.3E-07 9.4E-12 79.1 13.0 88 45-133 2-102 (212)
134 PF00151 Lipase: Lipase; Inte 98.6 8.1E-08 1.8E-12 89.5 7.8 94 39-132 70-186 (331)
135 KOG2100 Dipeptidyl aminopeptid 98.6 2.6E-06 5.5E-11 88.1 17.8 212 18-273 498-748 (755)
136 PLN02733 phosphatidylcholine-s 98.6 2.5E-07 5.5E-12 89.2 9.1 84 51-135 105-203 (440)
137 PF05990 DUF900: Alpha/beta hy 98.5 9.7E-07 2.1E-11 78.4 11.8 99 39-137 17-141 (233)
138 COG4188 Predicted dienelactone 98.5 1.1E-07 2.4E-12 87.3 5.5 193 39-261 70-303 (365)
139 KOG3043 Predicted hydrolase re 98.4 7.5E-06 1.6E-10 69.7 13.8 161 22-254 22-211 (242)
140 KOG2281 Dipeptidyl aminopeptid 98.4 5.3E-06 1.2E-10 80.4 13.9 193 40-271 642-866 (867)
141 KOG4840 Predicted hydrolases o 98.4 6.7E-06 1.5E-10 69.7 12.2 96 41-136 37-147 (299)
142 KOG2112 Lysophospholipase [Lip 98.4 5.4E-06 1.2E-10 70.1 11.7 164 41-271 4-203 (206)
143 PF12715 Abhydrolase_7: Abhydr 98.4 4.2E-07 9.2E-12 84.1 5.4 94 39-133 114-260 (390)
144 COG3509 LpqC Poly(3-hydroxybut 98.3 4.4E-06 9.5E-11 74.2 10.5 116 18-133 35-179 (312)
145 COG4814 Uncharacterized protei 98.3 4.4E-05 9.6E-10 66.2 16.1 93 42-134 47-177 (288)
146 KOG3847 Phospholipase A2 (plat 98.3 4.1E-06 8.9E-11 74.6 9.6 38 41-78 119-156 (399)
147 COG3150 Predicted esterase [Ge 98.3 5.4E-05 1.2E-09 61.4 13.9 90 43-135 2-93 (191)
148 PF00450 Peptidase_S10: Serine 98.2 0.00015 3.2E-09 70.6 20.0 115 21-135 14-183 (415)
149 COG1075 LipA Predicted acetylt 98.2 3.9E-06 8.5E-11 78.8 7.6 95 40-134 59-165 (336)
150 PF10340 DUF2424: Protein of u 98.1 3.8E-05 8.2E-10 71.7 12.4 97 39-136 121-238 (374)
151 PF11339 DUF3141: Protein of u 98.1 0.00018 4E-09 68.9 16.9 76 58-134 92-176 (581)
152 PF03583 LIP: Secretory lipase 98.1 7.4E-05 1.6E-09 68.7 13.8 80 59-138 18-118 (290)
153 PF05677 DUF818: Chlamydia CHL 98.1 0.0013 2.7E-08 60.2 21.1 98 22-119 116-236 (365)
154 PF05057 DUF676: Putative seri 98.1 7E-06 1.5E-10 72.3 6.6 78 40-117 4-97 (217)
155 KOG3253 Predicted alpha/beta h 98.1 9.1E-05 2E-09 71.7 13.6 155 40-255 176-348 (784)
156 PF05705 DUF829: Eukaryotic pr 98.0 0.0006 1.3E-08 61.1 18.1 209 42-269 1-240 (240)
157 KOG1551 Uncharacterized conser 97.9 0.00036 7.8E-09 61.0 12.7 204 61-273 135-367 (371)
158 COG4782 Uncharacterized protei 97.8 0.00018 3.9E-09 66.0 10.7 99 39-137 115-238 (377)
159 PF04301 DUF452: Protein of un 97.8 7.8E-05 1.7E-09 64.4 8.0 79 40-133 11-90 (213)
160 COG1770 PtrB Protease II [Amin 97.8 0.0011 2.3E-08 65.5 16.4 107 29-135 435-564 (682)
161 KOG3724 Negative regulator of 97.8 0.00019 4.1E-09 71.6 11.2 105 26-131 66-218 (973)
162 COG4099 Predicted peptidase [G 97.8 0.0002 4.4E-09 63.6 10.2 106 27-132 171-303 (387)
163 PF00756 Esterase: Putative es 97.8 0.00013 2.8E-09 65.8 9.1 51 84-134 98-151 (251)
164 PF12048 DUF3530: Protein of u 97.8 0.00073 1.6E-08 62.7 14.2 115 20-134 64-230 (310)
165 KOG1553 Predicted alpha/beta h 97.7 8.3E-05 1.8E-09 67.2 7.0 91 41-134 244-346 (517)
166 PF02450 LCAT: Lecithin:choles 97.7 0.00024 5.2E-09 68.3 10.5 80 55-134 66-161 (389)
167 PF05577 Peptidase_S28: Serine 97.7 0.00039 8.5E-09 68.1 11.1 94 40-134 29-149 (434)
168 PRK10439 enterobactin/ferric e 97.6 0.0009 1.9E-08 64.6 12.4 94 39-132 208-322 (411)
169 PF08386 Abhydrolase_4: TAP-li 97.6 0.00031 6.8E-09 53.8 7.1 60 211-271 34-93 (103)
170 KOG3101 Esterase D [General fu 97.4 0.0001 2.2E-09 62.2 2.9 96 40-135 44-178 (283)
171 COG1073 Hydrolases of the alph 97.4 0.0018 3.8E-08 59.4 11.3 60 212-272 233-297 (299)
172 PLN02606 palmitoyl-protein thi 97.4 0.0016 3.5E-08 59.0 10.4 92 40-132 26-131 (306)
173 cd00312 Esterase_lipase Estera 97.4 0.00023 5E-09 71.0 5.1 94 39-134 94-214 (493)
174 PF07082 DUF1350: Protein of u 97.3 0.036 7.7E-07 48.8 17.4 91 42-132 19-124 (250)
175 COG2936 Predicted acyl esteras 97.3 0.0062 1.3E-07 60.0 13.4 112 23-134 24-160 (563)
176 PLN02209 serine carboxypeptida 97.2 0.12 2.6E-06 50.3 22.3 115 21-135 42-214 (437)
177 PF10142 PhoPQ_related: PhoPQ- 97.2 0.0053 1.2E-07 57.8 12.1 159 87-273 158-321 (367)
178 KOG2237 Predicted serine prote 97.2 0.0021 4.6E-08 63.1 9.5 97 39-135 469-586 (712)
179 PLN03016 sinapoylglucose-malat 97.1 0.13 2.8E-06 50.2 21.3 116 20-135 39-212 (433)
180 PF11144 DUF2920: Protein of u 97.1 0.044 9.5E-07 51.8 17.2 36 99-134 185-220 (403)
181 COG1505 Serine proteases of th 97.0 0.013 2.8E-07 57.4 13.2 212 25-271 402-645 (648)
182 COG2819 Predicted hydrolase of 97.0 0.013 2.9E-07 52.0 11.9 53 80-132 112-171 (264)
183 PF02089 Palm_thioest: Palmito 97.0 0.0082 1.8E-07 54.1 10.7 93 40-132 5-115 (279)
184 COG4553 DepA Poly-beta-hydroxy 97.0 0.11 2.3E-06 46.7 17.2 94 40-135 103-211 (415)
185 KOG1282 Serine carboxypeptidas 96.9 0.34 7.3E-06 47.1 21.8 115 20-135 46-215 (454)
186 KOG2183 Prolylcarboxypeptidase 96.8 0.0065 1.4E-07 56.8 8.8 91 41-131 81-200 (492)
187 PLN02633 palmitoyl protein thi 96.8 0.009 2E-07 54.3 9.5 92 40-132 25-130 (314)
188 COG3946 VirJ Type IV secretory 96.8 0.0076 1.7E-07 56.2 9.1 81 41-121 261-349 (456)
189 KOG2541 Palmitoyl protein thio 96.7 0.014 2.9E-07 51.6 9.4 92 41-132 24-127 (296)
190 COG2272 PnbA Carboxylesterase 96.7 0.004 8.6E-08 59.8 6.6 96 39-134 93-218 (491)
191 cd00741 Lipase Lipase. Lipase 96.6 0.0054 1.2E-07 50.7 6.3 49 84-132 10-66 (153)
192 COG0627 Predicted esterase [Ge 96.5 0.0066 1.4E-07 56.2 6.8 97 40-136 54-190 (316)
193 PF01764 Lipase_3: Lipase (cla 96.5 0.0061 1.3E-07 49.4 5.9 37 82-118 48-84 (140)
194 PF00135 COesterase: Carboxyle 96.2 0.013 2.8E-07 59.0 7.5 94 40-133 125-245 (535)
195 PF06259 Abhydrolase_8: Alpha/ 96.1 0.031 6.8E-07 47.1 8.1 99 34-132 11-143 (177)
196 KOG3967 Uncharacterized conser 96.1 0.068 1.5E-06 45.6 9.7 93 40-132 101-226 (297)
197 PLN02517 phosphatidylcholine-s 96.0 0.014 3E-07 57.7 6.2 80 55-134 157-264 (642)
198 KOG2369 Lecithin:cholesterol a 96.0 0.018 3.9E-07 55.0 6.5 79 54-132 124-224 (473)
199 KOG2182 Hydrolytic enzymes of 95.8 0.041 8.9E-07 52.9 8.2 94 37-133 83-207 (514)
200 PF04083 Abhydro_lipase: Parti 95.8 0.016 3.4E-07 39.7 4.0 40 17-56 11-59 (63)
201 cd00519 Lipase_3 Lipase (class 95.7 0.026 5.6E-07 50.1 6.1 47 89-135 119-170 (229)
202 PF11187 DUF2974: Protein of u 95.5 0.041 9E-07 48.4 6.8 82 40-132 37-122 (224)
203 KOG2521 Uncharacterized conser 95.2 0.7 1.5E-05 43.3 14.0 228 36-273 34-291 (350)
204 PLN02454 triacylglycerol lipas 95.0 0.064 1.4E-06 51.1 6.7 54 84-137 212-275 (414)
205 PLN02571 triacylglycerol lipas 95.0 0.071 1.5E-06 50.9 7.0 37 82-118 208-246 (413)
206 PF06441 EHN: Epoxide hydrolas 94.8 0.075 1.6E-06 41.1 5.4 44 17-60 67-112 (112)
207 PLN02162 triacylglycerol lipas 94.7 0.14 3E-06 49.4 8.1 35 83-117 263-297 (475)
208 COG4287 PqaA PhoPQ-activated p 94.4 0.3 6.6E-06 45.3 9.2 163 89-273 225-388 (507)
209 KOG1202 Animal-type fatty acid 94.1 0.92 2E-05 48.5 12.8 93 39-134 2122-2220(2376)
210 COG2382 Fes Enterochelin ester 93.9 0.6 1.3E-05 42.4 9.9 104 29-133 84-212 (299)
211 PLN00413 triacylglycerol lipas 93.8 0.11 2.3E-06 50.3 5.4 35 83-117 269-303 (479)
212 KOG4372 Predicted alpha/beta h 93.8 0.12 2.7E-06 48.6 5.5 76 40-115 80-167 (405)
213 PF01083 Cutinase: Cutinase; 93.6 0.18 3.9E-06 42.8 5.9 84 51-134 22-123 (179)
214 COG4947 Uncharacterized protei 93.6 0.17 3.8E-06 41.7 5.4 105 29-134 16-137 (227)
215 PLN02408 phospholipase A1 93.6 0.11 2.4E-06 48.9 4.8 36 83-118 183-220 (365)
216 PLN02934 triacylglycerol lipas 93.0 0.16 3.5E-06 49.5 5.1 36 82-117 305-340 (515)
217 COG2830 Uncharacterized protei 93.0 0.11 2.3E-06 42.3 3.3 75 41-131 12-88 (214)
218 PF11288 DUF3089: Protein of u 93.0 0.21 4.6E-06 43.0 5.3 53 67-119 45-116 (207)
219 PLN02324 triacylglycerol lipas 92.8 0.28 6E-06 46.9 6.4 36 83-118 198-235 (415)
220 PF05277 DUF726: Protein of un 92.7 0.31 6.7E-06 45.7 6.5 41 95-135 217-262 (345)
221 COG2939 Carboxypeptidase C (ca 92.3 0.52 1.1E-05 45.8 7.5 103 30-132 88-235 (498)
222 PLN02310 triacylglycerol lipas 92.2 0.22 4.7E-06 47.5 4.9 37 82-118 189-229 (405)
223 PLN02802 triacylglycerol lipas 92.0 0.24 5.3E-06 48.3 4.9 36 83-118 313-350 (509)
224 PLN03037 lipase class 3 family 91.9 0.52 1.1E-05 46.2 7.0 37 82-118 298-338 (525)
225 KOG1516 Carboxylesterase and r 91.7 0.31 6.6E-06 49.3 5.6 93 40-132 112-231 (545)
226 PLN02753 triacylglycerol lipas 91.6 0.28 6.1E-06 48.0 4.9 36 82-117 291-331 (531)
227 PLN02719 triacylglycerol lipas 91.3 0.42 9.1E-06 46.7 5.7 35 83-117 278-317 (518)
228 PLN02761 lipase class 3 family 90.8 0.38 8.2E-06 47.1 4.9 35 83-117 273-313 (527)
229 TIGR03712 acc_sec_asp2 accesso 90.6 18 0.00039 35.4 16.9 103 30-138 279-395 (511)
230 PF06850 PHB_depo_C: PHB de-po 88.8 0.75 1.6E-05 39.0 4.5 59 212-271 135-201 (202)
231 PLN02847 triacylglycerol lipas 88.6 0.79 1.7E-05 45.7 5.2 26 93-118 246-271 (633)
232 KOG4569 Predicted lipase [Lipi 88.2 0.76 1.6E-05 43.3 4.8 37 82-118 155-191 (336)
233 PLN02213 sinapoylglucose-malat 87.0 2 4.3E-05 40.2 6.8 58 212-271 234-316 (319)
234 PF05576 Peptidase_S37: PS-10 86.4 0.64 1.4E-05 44.1 3.1 92 39-132 62-169 (448)
235 KOG2872 Uroporphyrinogen decar 82.7 3.8 8.3E-05 36.9 6.0 62 39-107 251-337 (359)
236 PF08237 PE-PPE: PE-PPE domain 82.0 4.9 0.00011 35.5 6.6 52 67-118 2-68 (225)
237 cd01714 ETF_beta The electron 81.9 6.4 0.00014 34.1 7.3 68 61-129 70-145 (202)
238 KOG2029 Uncharacterized conser 81.0 3.9 8.6E-05 40.7 6.0 35 98-132 526-571 (697)
239 PF07519 Tannase: Tannase and 80.9 2.3 5E-05 42.1 4.6 39 97-135 114-152 (474)
240 KOG1283 Serine carboxypeptidas 80.0 7.9 0.00017 35.6 7.1 97 39-137 30-170 (414)
241 COG5153 CVT17 Putative lipase 77.8 5.1 0.00011 36.1 5.3 42 88-131 266-307 (425)
242 KOG4540 Putative lipase essent 77.8 5.1 0.00011 36.1 5.3 42 88-131 266-307 (425)
243 PF03610 EIIA-man: PTS system 76.1 23 0.0005 27.3 8.2 71 42-114 2-74 (116)
244 PLN02213 sinapoylglucose-malat 75.9 8.7 0.00019 35.9 6.7 68 68-135 2-98 (319)
245 COG1448 TyrB Aspartate/tyrosin 75.4 12 0.00025 35.4 7.1 82 42-132 173-264 (396)
246 PF06309 Torsin: Torsin; Inte 74.3 14 0.00031 29.2 6.4 58 37-94 49-115 (127)
247 KOG4388 Hormone-sensitive lipa 73.9 20 0.00043 35.9 8.5 89 41-132 397-507 (880)
248 PRK12467 peptide synthase; Pro 73.1 19 0.00041 45.8 10.3 91 40-131 3692-3793(3956)
249 COG4822 CbiK Cobalamin biosynt 71.2 24 0.00051 30.5 7.3 59 41-103 139-199 (265)
250 KOG2385 Uncharacterized conser 69.4 13 0.00029 36.4 6.2 51 86-136 433-490 (633)
251 PF09949 DUF2183: Uncharacteri 69.0 47 0.001 25.0 9.5 76 53-128 9-97 (100)
252 cd07225 Pat_PNPLA6_PNPLA7 Pata 68.8 14 0.0003 34.3 6.2 62 54-119 2-64 (306)
253 cd00006 PTS_IIA_man PTS_IIA, P 68.5 42 0.0009 26.2 8.1 70 42-113 3-73 (122)
254 PF00448 SRP54: SRP54-type pro 67.8 42 0.0009 28.8 8.6 75 55-129 71-148 (196)
255 smart00827 PKS_AT Acyl transfe 61.9 8.9 0.00019 35.2 3.6 30 88-117 72-101 (298)
256 PF00698 Acyl_transf_1: Acyl t 61.8 6 0.00013 36.9 2.4 30 88-117 74-103 (318)
257 cd07198 Patatin Patatin-like p 61.7 11 0.00024 31.5 3.8 32 89-120 17-48 (172)
258 PRK10279 hypothetical protein; 61.3 10 0.00022 35.1 3.8 32 89-120 24-55 (300)
259 cd07207 Pat_ExoU_VipD_like Exo 59.4 13 0.00027 31.7 3.9 29 91-119 20-48 (194)
260 PRK05282 (alpha)-aspartyl dipe 59.1 77 0.0017 28.1 8.7 75 40-114 31-128 (233)
261 COG1576 Uncharacterized conser 58.9 32 0.0007 28.1 5.7 54 60-115 61-115 (155)
262 TIGR03131 malonate_mdcH malona 58.6 11 0.00024 34.7 3.6 31 88-118 66-96 (295)
263 cd07227 Pat_Fungal_NTE1 Fungal 57.6 14 0.0003 33.6 3.9 32 88-119 28-59 (269)
264 cd07210 Pat_hypo_W_succinogene 56.4 16 0.00036 32.0 4.1 28 92-119 22-49 (221)
265 COG1752 RssA Predicted esteras 56.1 14 0.00029 34.4 3.7 32 89-120 30-61 (306)
266 PRK14974 cell division protein 55.7 89 0.0019 29.4 9.1 66 64-129 219-287 (336)
267 TIGR00128 fabD malonyl CoA-acy 55.3 12 0.00027 34.1 3.3 30 89-118 73-103 (290)
268 PF02590 SPOUT_MTase: Predicte 54.0 29 0.00064 28.5 4.9 44 66-109 66-110 (155)
269 TIGR01425 SRP54_euk signal rec 52.3 1.2E+02 0.0027 29.6 9.6 71 59-129 174-247 (429)
270 cd07211 Pat_PNPLA8 Patatin-lik 52.1 31 0.00068 31.9 5.5 17 101-117 44-60 (308)
271 cd07228 Pat_NTE_like_bacteria 51.8 21 0.00045 29.9 3.9 29 92-120 22-50 (175)
272 COG3340 PepE Peptidase E [Amin 51.7 57 0.0012 28.4 6.3 37 40-76 32-71 (224)
273 cd07213 Pat17_PNPLA8_PNPLA9_li 51.6 44 0.00095 30.7 6.3 19 101-119 37-55 (288)
274 cd03146 GAT1_Peptidase_E Type 50.8 1.3E+02 0.0028 26.1 8.8 75 39-114 30-129 (212)
275 COG3946 VirJ Type IV secretory 49.4 57 0.0012 31.3 6.5 91 42-132 50-156 (456)
276 PF06792 UPF0261: Uncharacteri 49.1 2.2E+02 0.0047 27.6 10.4 88 42-129 3-126 (403)
277 cd07209 Pat_hypo_Ecoli_Z1214_l 48.3 23 0.0005 30.9 3.8 32 89-120 17-48 (215)
278 cd07205 Pat_PNPLA6_PNPLA7_NTE1 46.6 32 0.00069 28.7 4.3 29 91-119 21-49 (175)
279 TIGR00959 ffh signal recogniti 45.6 1.8E+02 0.0039 28.4 9.7 73 58-130 173-248 (428)
280 cd07230 Pat_TGL4-5_like Triacy 44.7 14 0.00031 35.9 2.0 37 88-124 91-127 (421)
281 COG1087 GalE UDP-glucose 4-epi 44.1 2.6E+02 0.0055 26.0 9.6 72 59-132 16-119 (329)
282 PF04244 DPRP: Deoxyribodipyri 43.8 58 0.0013 28.7 5.5 49 55-103 50-98 (224)
283 TIGR02816 pfaB_fam PfaB family 42.8 25 0.00053 35.4 3.4 32 88-119 254-286 (538)
284 COG0529 CysC Adenylylsulfate k 42.8 59 0.0013 27.5 5.0 37 39-75 21-59 (197)
285 PRK06731 flhF flagellar biosyn 42.6 2.6E+02 0.0057 25.4 9.9 71 59-129 145-219 (270)
286 PRK10867 signal recognition pa 42.5 2.5E+02 0.0055 27.5 10.2 71 59-129 175-248 (433)
287 PF10081 Abhydrolase_9: Alpha/ 42.1 49 0.0011 30.1 4.8 56 84-139 92-153 (289)
288 PRK00103 rRNA large subunit me 41.7 82 0.0018 26.0 5.7 44 67-110 67-111 (157)
289 PF03681 UPF0150: Uncharacteri 41.3 59 0.0013 20.4 3.9 29 66-94 12-44 (48)
290 cd07229 Pat_TGL3_like Triacylg 41.2 16 0.00035 35.0 1.7 40 88-127 101-140 (391)
291 KOG0781 Signal recognition par 41.1 1.6E+02 0.0034 29.2 8.1 86 44-129 442-538 (587)
292 COG0541 Ffh Signal recognition 40.8 1.3E+02 0.0029 29.2 7.7 73 57-129 172-247 (451)
293 PRK05579 bifunctional phosphop 39.9 1.6E+02 0.0035 28.5 8.4 64 41-105 117-196 (399)
294 COG3673 Uncharacterized conser 39.2 3.3E+02 0.0072 25.5 9.6 86 41-130 32-150 (423)
295 PRK02399 hypothetical protein; 39.2 3.7E+02 0.008 26.1 10.7 86 44-129 6-128 (406)
296 cd07208 Pat_hypo_Ecoli_yjju_li 38.2 43 0.00093 30.2 4.0 30 92-121 20-50 (266)
297 KOG1752 Glutaredoxin and relat 37.6 1.4E+02 0.0031 22.7 6.0 78 40-120 14-91 (104)
298 TIGR02873 spore_ylxY probable 37.6 43 0.00094 30.4 3.9 33 42-74 232-264 (268)
299 TIGR02764 spore_ybaN_pdaB poly 37.4 32 0.0007 29.2 2.9 33 42-74 153-188 (191)
300 PF04084 ORC2: Origin recognit 37.2 1.5E+02 0.0032 27.9 7.4 32 80-111 118-150 (326)
301 PRK00771 signal recognition pa 37.0 3.9E+02 0.0084 26.3 10.5 89 40-135 94-187 (437)
302 cd07224 Pat_like Patatin-like 36.9 47 0.001 29.4 3.9 31 90-120 19-51 (233)
303 TIGR02069 cyanophycinase cyano 36.9 2.3E+02 0.005 25.4 8.4 75 38-112 26-129 (250)
304 cd07232 Pat_PLPL Patain-like p 36.7 46 0.001 32.3 4.1 39 88-126 85-123 (407)
305 PF07519 Tannase: Tannase and 36.7 83 0.0018 31.3 6.0 59 212-271 354-426 (474)
306 COG3727 Vsr DNA G:T-mismatch r 35.3 1.5E+02 0.0032 23.6 5.8 10 42-51 59-68 (150)
307 COG3933 Transcriptional antite 35.2 2.3E+02 0.005 27.7 8.3 73 40-114 109-181 (470)
308 TIGR00246 tRNA_RlmH_YbeA rRNA 34.9 82 0.0018 25.9 4.7 51 58-111 58-109 (153)
309 PF03853 YjeF_N: YjeF-related 34.7 1.1E+02 0.0024 25.5 5.6 60 38-97 23-82 (169)
310 cd07231 Pat_SDP1-like Sugar-De 34.5 48 0.001 30.8 3.6 36 88-123 86-121 (323)
311 cd07212 Pat_PNPLA9 Patatin-lik 34.3 62 0.0013 30.1 4.4 19 101-119 35-53 (312)
312 TIGR02884 spore_pdaA delta-lac 34.2 51 0.0011 28.9 3.7 33 42-74 188-221 (224)
313 COG2230 Cfa Cyclopropane fatty 34.1 1.6E+02 0.0036 26.9 6.9 64 67-131 40-106 (283)
314 COG1703 ArgK Putative periplas 34.1 2.8E+02 0.006 25.7 8.2 70 40-109 50-158 (323)
315 cd01715 ETF_alpha The electron 32.5 1.9E+02 0.0042 23.8 6.8 58 61-119 45-106 (168)
316 cd07204 Pat_PNPLA_like Patatin 31.8 68 0.0015 28.6 4.1 20 101-120 34-53 (243)
317 PRK14729 miaA tRNA delta(2)-is 31.7 2.1E+02 0.0045 26.5 7.3 64 41-106 4-101 (300)
318 PF03283 PAE: Pectinacetyleste 31.5 63 0.0014 30.8 4.0 34 98-131 156-193 (361)
319 PRK06029 3-octaprenyl-4-hydrox 31.5 2.2E+02 0.0047 24.2 6.9 57 41-98 116-177 (185)
320 PRK11916 electron transfer fla 31.5 3.5E+02 0.0076 25.2 8.7 59 60-119 41-102 (312)
321 COG2069 CdhD CO dehydrogenase/ 30.4 3.9E+02 0.0084 24.6 8.3 86 20-107 101-208 (403)
322 PRK04148 hypothetical protein; 30.1 1.2E+02 0.0027 24.2 4.9 46 82-131 2-47 (134)
323 PF02230 Abhydrolase_2: Phosph 29.6 1.5E+02 0.0031 25.6 5.8 55 40-94 155-214 (216)
324 cd07206 Pat_TGL3-4-5_SDP1 Tria 29.4 1.2E+02 0.0025 28.1 5.2 34 90-123 89-122 (298)
325 PF01012 ETF: Electron transfe 29.3 1.8E+02 0.0039 23.8 6.1 57 62-119 53-113 (164)
326 PF06180 CbiK: Cobalt chelatas 29.3 1.6E+02 0.0035 26.6 6.1 60 40-103 142-203 (262)
327 PF05724 TPMT: Thiopurine S-me 28.5 68 0.0015 28.1 3.5 29 42-75 39-67 (218)
328 PF13207 AAA_17: AAA domain; P 28.4 61 0.0013 24.7 2.9 31 43-75 1-32 (121)
329 PF01583 APS_kinase: Adenylyls 28.0 1E+02 0.0022 25.4 4.2 36 40-75 1-38 (156)
330 PF12780 AAA_8: P-loop contain 27.7 2.3E+02 0.005 25.7 6.8 53 43-98 34-87 (268)
331 TIGR00064 ftsY signal recognit 27.5 4.7E+02 0.01 23.7 10.0 68 63-130 150-226 (272)
332 cd07221 Pat_PNPLA3 Patatin-lik 27.5 85 0.0018 28.2 4.0 22 99-120 33-54 (252)
333 PRK12724 flagellar biosynthesi 27.4 4.8E+02 0.01 25.6 9.1 70 60-129 292-367 (432)
334 PRK09273 hypothetical protein; 27.3 4.2E+02 0.0091 23.1 8.6 74 54-131 17-95 (211)
335 cd07218 Pat_iPLA2 Calcium-inde 27.1 85 0.0018 28.1 3.9 20 101-120 33-52 (245)
336 PF09994 DUF2235: Uncharacteri 26.7 1.2E+02 0.0025 27.7 4.8 32 87-118 80-112 (277)
337 KOG4231 Intracellular membrane 26.4 70 0.0015 31.6 3.3 53 65-119 414-471 (763)
338 TIGR00521 coaBC_dfp phosphopan 26.1 4.1E+02 0.009 25.6 8.6 86 41-131 113-233 (390)
339 cd07220 Pat_PNPLA2 Patatin-lik 26.1 89 0.0019 28.0 3.8 21 100-120 38-58 (249)
340 cd01819 Patatin_and_cPLA2 Pata 26.0 95 0.002 25.4 3.7 19 98-116 28-46 (155)
341 COG0159 TrpA Tryptophan syntha 26.0 2.4E+02 0.0053 25.5 6.5 70 41-115 96-166 (265)
342 KOG0780 Signal recognition par 25.5 3.7E+02 0.008 26.0 7.7 69 60-128 176-247 (483)
343 PF03575 Peptidase_S51: Peptid 25.4 1.7E+02 0.0037 23.8 5.2 53 59-111 5-81 (154)
344 COG0400 Predicted esterase [Ge 25.4 3.2E+02 0.0069 23.7 7.0 56 39-94 145-204 (207)
345 cd03144 GATase1_ScBLP_like Typ 25.2 2.5E+02 0.0053 21.8 5.6 37 75-112 50-90 (114)
346 COG0022 AcoB Pyruvate/2-oxoglu 24.3 5.8E+02 0.013 23.7 8.8 97 11-118 175-278 (324)
347 TIGR02683 upstrm_HI1419 probab 24.3 1.3E+02 0.0029 22.1 4.0 38 13-53 42-80 (95)
348 COG5023 Tubulin [Cytoskeleton] 24.1 1.8E+02 0.0039 27.7 5.4 57 76-132 103-172 (443)
349 cd06409 PB1_MUG70 The MUG70 pr 24.1 63 0.0014 23.6 2.0 47 347-395 9-55 (86)
350 cd01985 ETF The electron trans 23.7 2E+02 0.0044 24.0 5.5 53 66-119 58-114 (181)
351 PF09314 DUF1972: Domain of un 23.4 4.6E+02 0.01 22.3 10.1 38 79-116 67-112 (185)
352 TIGR03702 lip_kinase_YegS lipi 23.2 3.9E+02 0.0086 24.3 7.7 47 42-88 2-48 (293)
353 KOG1411 Aspartate aminotransfe 23.2 1.5E+02 0.0033 27.9 4.7 83 42-132 199-291 (427)
354 cd07222 Pat_PNPLA4 Patatin-lik 22.8 1E+02 0.0022 27.5 3.6 17 101-117 34-50 (246)
355 PF00585 Thr_dehydrat_C: C-ter 22.6 2.2E+02 0.0047 20.9 4.7 42 28-71 38-79 (91)
356 KOG2170 ATPase of the AAA+ sup 22.6 1.6E+02 0.0036 27.2 4.7 23 35-57 104-126 (344)
357 COG2185 Sbm Methylmalonyl-CoA 22.5 4.2E+02 0.0092 21.5 7.5 36 39-74 11-47 (143)
358 PF02502 LacAB_rpiB: Ribose/Ga 22.3 4E+02 0.0086 21.5 6.5 70 57-130 15-87 (140)
359 PRK11889 flhF flagellar biosyn 22.1 7.5E+02 0.016 24.2 9.5 78 52-129 304-385 (436)
360 COG1246 ArgA N-acetylglutamate 21.7 1.7E+02 0.0036 24.0 4.2 43 69-111 71-113 (153)
361 cd03016 PRX_1cys Peroxiredoxin 21.6 4.8E+02 0.01 22.3 7.5 90 40-132 26-126 (203)
362 PRK13256 thiopurine S-methyltr 21.5 1E+02 0.0022 27.2 3.2 30 42-76 45-74 (226)
363 PRK00090 bioD dithiobiotin syn 21.4 3.3E+02 0.0072 23.4 6.6 72 57-129 94-170 (222)
364 COG3621 Patatin [General funct 21.4 1.9E+02 0.0041 27.1 4.9 52 67-120 8-64 (394)
365 COG1751 Uncharacterized conser 21.3 3.7E+02 0.0081 22.0 6.0 50 71-122 2-51 (186)
366 PRK11460 putative hydrolase; P 21.3 3.8E+02 0.0083 23.4 7.0 56 40-95 148-208 (232)
367 PRK12726 flagellar biosynthesi 21.2 7.7E+02 0.017 23.9 9.4 78 52-129 269-350 (407)
368 KOG4037 Photoreceptor synaptic 21.0 1.1E+02 0.0025 25.4 3.1 18 355-372 60-77 (240)
369 TIGR02113 coaC_strep phosphopa 21.0 1.8E+02 0.004 24.5 4.6 36 40-75 112-150 (177)
370 COG0324 MiaA tRNA delta(2)-iso 20.7 3.1E+02 0.0067 25.5 6.3 65 40-106 2-101 (308)
371 TIGR03709 PPK2_rel_1 polyphosp 20.7 1.1E+02 0.0023 27.8 3.2 65 40-107 55-123 (264)
372 PRK03363 fixB putative electro 20.4 3.2E+02 0.007 25.4 6.4 58 62-119 43-103 (313)
373 TIGR03707 PPK2_P_aer polyphosp 20.4 1.2E+02 0.0027 26.8 3.5 68 40-110 30-101 (230)
374 KOG1532 GTPase XAB1, interacts 20.2 6E+02 0.013 23.4 7.6 40 36-75 14-55 (366)
375 cd03129 GAT1_Peptidase_E_like 20.1 5.6E+02 0.012 21.9 8.3 75 40-115 29-130 (210)
376 COG0331 FabD (acyl-carrier-pro 20.1 1.2E+02 0.0025 28.3 3.4 22 96-117 83-104 (310)
377 PF12242 Eno-Rase_NADH_b: NAD( 20.0 1.4E+02 0.0031 21.3 3.0 25 95-119 37-61 (78)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=3.4e-31 Score=245.53 Aligned_cols=251 Identities=16% Similarity=0.142 Sum_probs=170.5
Q ss_pred CCceEEEeeCCeeEEEEEcCCCCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCCC----------------
Q 015755 17 QVPLHKIPIGTKQWRYYDFGPKVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWN---------------- 80 (401)
Q Consensus 17 ~~~~~~~~~~~~~l~y~~~G~~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~s---------------- 80 (401)
+.+.+++++++.+++|...|++ +|+|||+||+++++..|..++..|.. .|+|+++|+||||.
T Consensus 7 ~~~~~~~~~~~~~i~y~~~G~~-~~~vlllHG~~~~~~~w~~~~~~L~~-~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~ 84 (294)
T PLN02824 7 QVETRTWRWKGYNIRYQRAGTS-GPALVLVHGFGGNADHWRKNTPVLAK-SHRVYAIDLLGYGYSDKPNPRSAPPNSFYT 84 (294)
T ss_pred CCCCceEEEcCeEEEEEEcCCC-CCeEEEECCCCCChhHHHHHHHHHHh-CCeEEEEcCCCCCCCCCCccccccccccCC
Confidence 4567889999999999999864 58999999999999999999999985 58999999999862
Q ss_pred hHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCc-cc----ccccch---
Q 015755 81 HHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPW-AP----IVSWTP--- 152 (401)
Q Consensus 81 ~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~-~~----~~~~~~--- 152 (401)
++++++++.+++++++.++++|+||||||++++.+|.++|++|+++|++++............. .. ......
T Consensus 85 ~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (294)
T PLN02824 85 FETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETA 164 (294)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchh
Confidence 4788999999999999999999999999999999999999999999999985422100000000 00 000000
Q ss_pred --hh---------HHHHHHhhccCCCCCCCchhhhHHHHHHhhhhcCH-HHHHHHhhhhcc-cccccccccCCcEEEEEe
Q 015755 153 --SF---------LLKRYVLTGIHDGPHEPFIADSVDFVVCQVETLSR-EDLASRLTLTAD-AASVGNLLLSDSHITIMD 219 (401)
Q Consensus 153 --~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~i~~Pvlli~G 219 (401)
.. .........+... ........+.+......... ..+...+..... ........+++|+++|+|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G 242 (294)
T PLN02824 165 VGKAFFKSVATPETVKNILCQCYHDD--SAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWG 242 (294)
T ss_pred HHHHHHHhhcCHHHHHHHHHHhccCh--hhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEe
Confidence 00 0000000000000 00111111111110000000 011111100000 001112357899999999
Q ss_pred CCCCCCCcHHHHHHHHHHcCCCeEEEecCCCCCCCcCChHHHHHHHHHHHhhc
Q 015755 220 TNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFLSRPDEVNLHLQLHLRRV 272 (401)
Q Consensus 220 ~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~~~ 272 (401)
++| .+++.+..+.+.+..+++++++++++||++++|+|++|++.|.+|++++
T Consensus 243 ~~D-~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 243 EKD-PWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred cCC-CCCChHHHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 999 6889988998888888899999999999999999999999999999753
No 2
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.98 E-value=4.2e-31 Score=245.84 Aligned_cols=249 Identities=20% Similarity=0.265 Sum_probs=168.4
Q ss_pred CceEEEeeCC-----eeEEEEEcCCCCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC-----------Ch
Q 015755 18 VPLHKIPIGT-----KQWRYYDFGPKVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW-----------NH 81 (401)
Q Consensus 18 ~~~~~~~~~~-----~~l~y~~~G~~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~-----------s~ 81 (401)
+..+++++++ .+++|...|++++|+|||+||++++...|..+++.|.++||+|+++|+|||| ++
T Consensus 19 ~~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~ 98 (302)
T PRK00870 19 FAPHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTY 98 (302)
T ss_pred CCceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCH
Confidence 4567888988 8999999998778999999999999999999999998678999999999986 35
Q ss_pred HHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChh---HhhcCCcccccccchhhHHHH
Q 015755 82 HEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHS---FAAAMPWAPIVSWTPSFLLKR 158 (401)
Q Consensus 82 ~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 158 (401)
+++++++.+++++++.++++++||||||.+|+.+|.++|++|.++|++++...... ......+.......+......
T Consensus 99 ~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (302)
T PRK00870 99 ARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLPVGR 178 (302)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccccCchhhHHH
Confidence 78899999999999999999999999999999999999999999999997532111 000001111111111110111
Q ss_pred HHhhccCCCCCCCchhhhHHHHHHhhhh----cCHHHHHHHhh-------hhccc-ccccccccCCcEEEEEeCCCCCCC
Q 015755 159 YVLTGIHDGPHEPFIADSVDFVVCQVET----LSREDLASRLT-------LTADA-ASVGNLLLSDSHITIMDTNDYCAT 226 (401)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-------~~~~~-~~~~~~~i~~Pvlli~G~~D~~~~ 226 (401)
....... ..........+...... ........... ..... .......+.+|+++|+|++| .++
T Consensus 179 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D-~~~ 253 (302)
T PRK00870 179 LVNGGTV----RDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSD-PIT 253 (302)
T ss_pred Hhhcccc----ccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCC-Ccc
Confidence 1100000 00000111111000000 00000000000 00000 00112457899999999999 577
Q ss_pred cHHHHHHHHHHcCCCe---EEEecCCCCCCCcCChHHHHHHHHHHHhhc
Q 015755 227 SQQLKDQLSERYSGAR---QAYMKTGGEFPFLSRPDEVNLHLQLHLRRV 272 (401)
Q Consensus 227 ~~~~~~~~~~~~~~~~---~~~i~~~GH~~~~e~p~~v~~~i~~fl~~~ 272 (401)
+... +.+.+.+++++ +++++++||++++|+|+++++.|.+|++++
T Consensus 254 ~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 254 GGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred cCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 7766 88999998876 889999999999999999999999999764
No 3
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.97 E-value=2.9e-30 Score=229.74 Aligned_cols=256 Identities=17% Similarity=0.181 Sum_probs=180.7
Q ss_pred CCceEEEeeCCeeEEEEEcCCCCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC-----------ChHHHH
Q 015755 17 QVPLHKIPIGTKQWRYYDFGPKVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW-----------NHHEWI 85 (401)
Q Consensus 17 ~~~~~~~~~~~~~l~y~~~G~~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~-----------s~~~~a 85 (401)
.+...+++.++++++|.+.|++++|.|+++||++.+..+|+.++..|+.+||+|+++|+|||| +++.++
T Consensus 21 ~~~hk~~~~~gI~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~ 100 (322)
T KOG4178|consen 21 AISHKFVTYKGIRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELV 100 (322)
T ss_pred hcceeeEEEccEEEEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHH
Confidence 466788999999999999999999999999999999999999999999989999999999984 678999
Q ss_pred HHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhh------cC--Ccccc----------
Q 015755 86 QAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAA------AM--PWAPI---------- 147 (401)
Q Consensus 86 ~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~------~~--~~~~~---------- 147 (401)
+|+..++++++.++++++||+|||++|..+|..+|++|+++|+++.....+.... .. .+...
T Consensus 101 ~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~ 180 (322)
T KOG4178|consen 101 GDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPET 180 (322)
T ss_pred HHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchh
Confidence 9999999999999999999999999999999999999999999997655211100 00 00000
Q ss_pred --cccchhhHHHHHHhhccCCCC---------CCCchhhhHHHHHHhhhhcCHH---HHHHHhhhhcccccccccccCCc
Q 015755 148 --VSWTPSFLLKRYVLTGIHDGP---------HEPFIADSVDFVVCQVETLSRE---DLASRLTLTADAASVGNLLLSDS 213 (401)
Q Consensus 148 --~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~P 213 (401)
...........+......... ...+.....+.+........-. +..+.+..+..........+.+|
T Consensus 181 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iP 260 (322)
T KOG4178|consen 181 ELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIP 260 (322)
T ss_pred hhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccccccccccc
Confidence 000001111111111111000 0112333344444333221111 11111222211123445568889
Q ss_pred EEEEEeCCCCCCCcHHHHHHHHHHcCCC-eEEEecCCCCCCCcCChHHHHHHHHHHHhhc
Q 015755 214 HITIMDTNDYCATSQQLKDQLSERYSGA-RQAYMKTGGEFPFLSRPDEVNLHLQLHLRRV 272 (401)
Q Consensus 214 vlli~G~~D~~~~~~~~~~~~~~~~~~~-~~~~i~~~GH~~~~e~p~~v~~~i~~fl~~~ 272 (401)
+++|+|++|.....+...+.+++..|+. +.++++|+||+++.|+|++|++++..|+++.
T Consensus 261 v~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 261 VLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred eEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 9999999995444444666777777875 7889999999999999999999999999864
No 4
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.97 E-value=1.5e-30 Score=239.00 Aligned_cols=249 Identities=16% Similarity=0.136 Sum_probs=166.7
Q ss_pred eEEEeeCCeeEEEEEcC-CCCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC---------ChHHHHHHHH
Q 015755 20 LHKIPIGTKQWRYYDFG-PKVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW---------NHHEWIQAFE 89 (401)
Q Consensus 20 ~~~~~~~~~~l~y~~~G-~~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~---------s~~~~a~dl~ 89 (401)
.+++++++.+++|...+ .+.+++|||+||++++...|..++..|. ++|+|+++|+|||| +++++++++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~ 82 (276)
T TIGR02240 4 FRTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALD-PDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAA 82 (276)
T ss_pred EEEeccCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhc-cCceEEEECCCCCCCCCCCCCcCcHHHHHHHHH
Confidence 46788899999998763 3345799999999999999999999997 57999999999997 3678999999
Q ss_pred HHHHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCC----cccccccchhhHHHHHHhhccC
Q 015755 90 KFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMP----WAPIVSWTPSFLLKRYVLTGIH 165 (401)
Q Consensus 90 ~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 165 (401)
++++++++++++|+||||||++++.+|.++|++|++||++++............ ....................+.
T Consensus 83 ~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (276)
T TIGR02240 83 RMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDIYG 162 (276)
T ss_pred HHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchhhhhcc
Confidence 999999999999999999999999999999999999999998754211000000 0000000000000000000000
Q ss_pred CCCCCCchhhhHHHHHHhhhhcCH-HHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEE
Q 015755 166 DGPHEPFIADSVDFVVCQVETLSR-EDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQA 244 (401)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~ 244 (401)
... .. ................. ......+.............+++|+++|+|++| .+++++..+.+.+.+++++++
T Consensus 163 ~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D-~~v~~~~~~~l~~~~~~~~~~ 239 (276)
T TIGR02240 163 GAF-RR-DPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDD-PIIPLINMRLLAWRIPNAELH 239 (276)
T ss_pred cee-ec-cchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCC-CcCCHHHHHHHHHhCCCCEEE
Confidence 000 00 00000011100000000 000010100000001112357899999999999 688999999999999999999
Q ss_pred EecCCCCCCCcCChHHHHHHHHHHHhhcc
Q 015755 245 YMKTGGEFPFLSRPDEVNLHLQLHLRRVG 273 (401)
Q Consensus 245 ~i~~~GH~~~~e~p~~v~~~i~~fl~~~~ 273 (401)
+++ +||++++|+|+++++.|.+|+++..
T Consensus 240 ~i~-~gH~~~~e~p~~~~~~i~~fl~~~~ 267 (276)
T TIGR02240 240 IID-DGHLFLITRAEAVAPIIMKFLAEER 267 (276)
T ss_pred EEc-CCCchhhccHHHHHHHHHHHHHHhh
Confidence 997 5999999999999999999999764
No 5
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.97 E-value=5.6e-30 Score=237.54 Aligned_cols=253 Identities=13% Similarity=0.180 Sum_probs=166.9
Q ss_pred CCceEEEeeCCeeEEEEEcCCCCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC---------ChHHHHHH
Q 015755 17 QVPLHKIPIGTKQWRYYDFGPKVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW---------NHHEWIQA 87 (401)
Q Consensus 17 ~~~~~~~~~~~~~l~y~~~G~~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~---------s~~~~a~d 87 (401)
..+.++++++|.+++|...|+ +|+|||+||++++...|..+++.|.++ |+|+++|+|||| +.+++++|
T Consensus 6 ~~~~~~~~~~g~~i~y~~~G~--g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~~~~~~~~~a~d 82 (295)
T PRK03592 6 PGEMRRVEVLGSRMAYIETGE--GDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPDIDYTFADHARY 82 (295)
T ss_pred CCcceEEEECCEEEEEEEeCC--CCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCCCCCCHHHHHHH
Confidence 345677889999999999995 689999999999999999999999865 699999999985 57889999
Q ss_pred HHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcC-Ccccccccc------hhhHH--HH
Q 015755 88 FEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAM-PWAPIVSWT------PSFLL--KR 158 (401)
Q Consensus 88 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~-~~~~~~~~~------~~~~~--~~ 158 (401)
+..++++++.++++++||||||.+|+.+|.++|++|+++|++++......+.... ......... ..... ..
T Consensus 83 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (295)
T PRK03592 83 LDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENV 162 (295)
T ss_pred HHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchhh
Confidence 9999999999999999999999999999999999999999999854322111000 000000000 00000 00
Q ss_pred HHhhccCCCCCCCchhhhHHHHHHhhhhcC-HHHHHHHhhh------------hcccccccccccCCcEEEEEeCCCCCC
Q 015755 159 YVLTGIHDGPHEPFIADSVDFVVCQVETLS-REDLASRLTL------------TADAASVGNLLLSDSHITIMDTNDYCA 225 (401)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~------------~~~~~~~~~~~i~~Pvlli~G~~D~~~ 225 (401)
.....+.......+..+....+........ .......... ...........+++|+++|+|++| .+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D-~~ 241 (295)
T PRK03592 163 FIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPG-AI 241 (295)
T ss_pred HHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCC-cc
Confidence 000000000000111111111111110000 0000000000 000000112347899999999999 56
Q ss_pred C-cHHHHHHHHHHcCCCeEEEecCCCCCCCcCChHHHHHHHHHHHhhcc
Q 015755 226 T-SQQLKDQLSERYSGARQAYMKTGGEFPFLSRPDEVNLHLQLHLRRVG 273 (401)
Q Consensus 226 ~-~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~~~~ 273 (401)
+ +....+.+.+..+++++++++++||++++|+|+++++.|.+|+++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 242 LTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLR 290 (295)
T ss_pred cCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhc
Confidence 6 55555555666789999999999999999999999999999998764
No 6
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.97 E-value=2.2e-29 Score=232.11 Aligned_cols=245 Identities=18% Similarity=0.253 Sum_probs=163.2
Q ss_pred CCceEEEeeCCeeEEEEEcCCCCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC----------ChHHHHH
Q 015755 17 QVPLHKIPIGTKQWRYYDFGPKVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW----------NHHEWIQ 86 (401)
Q Consensus 17 ~~~~~~~~~~~~~l~y~~~G~~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~----------s~~~~a~ 86 (401)
.+..+++++++.+++|...|. +|+|||+||++.+...|..++..|. ++|+|+++|+|||| +.+++++
T Consensus 13 ~~~~~~~~~~~~~i~y~~~G~--~~~iv~lHG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 89 (286)
T PRK03204 13 PFESRWFDSSRGRIHYIDEGT--GPPILLCHGNPTWSFLYRDIIVALR-DRFRCVAPDYLGFGLSERPSGFGYQIDEHAR 89 (286)
T ss_pred cccceEEEcCCcEEEEEECCC--CCEEEEECCCCccHHHHHHHHHHHh-CCcEEEEECCCCCCCCCCCCccccCHHHHHH
Confidence 356778999999999999985 6899999999999999999999998 57999999999985 3578899
Q ss_pred HHHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChh-H-----hhcCCccccc-ccc-hhhHHHH
Q 015755 87 AFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHS-F-----AAAMPWAPIV-SWT-PSFLLKR 158 (401)
Q Consensus 87 dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~-~-----~~~~~~~~~~-~~~-~~~~~~~ 158 (401)
++..++++++.++++++||||||.+++.+|..+|++|+++|++++...... . .......... ... ......+
T Consensus 90 ~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (286)
T PRK03204 90 VIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVER 169 (286)
T ss_pred HHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhhhhHHHHH
Confidence 999999999999999999999999999999999999999999887532110 0 0000000000 000 0011111
Q ss_pred HHhhccCCCCCCCchhhhHHHHHHhhhhcC-HHHHH---HHhh-h----hcccccccccccCCcEEEEEeCCCCCCC-cH
Q 015755 159 YVLTGIHDGPHEPFIADSVDFVVCQVETLS-REDLA---SRLT-L----TADAASVGNLLLSDSHITIMDTNDYCAT-SQ 228 (401)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~-~----~~~~~~~~~~~i~~Pvlli~G~~D~~~~-~~ 228 (401)
..... ............+........ ...+. ..+. . ............++|+++|+|++| .++ +.
T Consensus 170 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D-~~~~~~ 244 (286)
T PRK03204 170 LIPAG----TEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKD-VAFRPK 244 (286)
T ss_pred hcccc----ccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCC-cccCcH
Confidence 11100 000110111111100000000 00000 0000 0 000000111123799999999999 455 45
Q ss_pred HHHHHHHHHcCCCeEEEecCCCCCCCcCChHHHHHHHHHHH
Q 015755 229 QLKDQLSERYSGARQAYMKTGGEFPFLSRPDEVNLHLQLHL 269 (401)
Q Consensus 229 ~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~v~~~i~~fl 269 (401)
...+.+.+.+|++++++++++||++++|+|+++++.|.+|+
T Consensus 245 ~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 245 TILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred HHHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 56788999999999999999999999999999999999997
No 7
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=2.7e-29 Score=238.70 Aligned_cols=249 Identities=20% Similarity=0.228 Sum_probs=163.9
Q ss_pred eEEEeeCCe-eEEEEEcCCC----CCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC----------ChHHH
Q 015755 20 LHKIPIGTK-QWRYYDFGPK----VVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW----------NHHEW 84 (401)
Q Consensus 20 ~~~~~~~~~-~l~y~~~G~~----~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~----------s~~~~ 84 (401)
.+++.+++. +++|...|++ ++|+|||+||++++...|.+++..|. ++|+|+++|+|||| +++++
T Consensus 63 ~~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~ 141 (360)
T PLN02679 63 CKKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLA-KNYTVYAIDLLGFGASDKPPGFSYTMETW 141 (360)
T ss_pred CceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHh-cCCEEEEECCCCCCCCCCCCCccccHHHH
Confidence 456777777 9999999975 56899999999999999999999998 47999999999996 35789
Q ss_pred HHHHHHHHHHhCCceEEEEEEchhHHHHHHHHH-hCCcccceEEEecCCCCChhHhhcCCcc-----ccc---cc-----
Q 015755 85 IQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQ-HRPRRVRSLVLSNTFLDTHSFAAAMPWA-----PIV---SW----- 150 (401)
Q Consensus 85 a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~-~~P~~V~~lvli~~~~~~~~~~~~~~~~-----~~~---~~----- 150 (401)
++++.+++++++.++++||||||||.+++.+|. .+|++|+++|++++............+. ... .+
T Consensus 142 a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (360)
T PLN02679 142 AELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQR 221 (360)
T ss_pred HHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhch
Confidence 999999999999999999999999999999887 4799999999999854321100000000 000 00
Q ss_pred -chh---------hHHHHHHhhccCCCCCCCchhhhHHHHHHhhhhcC-HHHHHHHhhhhcc-cccccccccCCcEEEEE
Q 015755 151 -TPS---------FLLKRYVLTGIHDGPHEPFIADSVDFVVCQVETLS-REDLASRLTLTAD-AASVGNLLLSDSHITIM 218 (401)
Q Consensus 151 -~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~i~~Pvlli~ 218 (401)
... ..++..+...+.. .........+.+........ ...+......... ........+++|+|+|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~ 299 (360)
T PLN02679 222 GIASALFNRVKQRDNLKNILLSVYGN--KEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLW 299 (360)
T ss_pred hhHHHHHHHhcCHHHHHHHHHHhccC--cccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEE
Confidence 000 0000000000000 00111111111111111000 1111111110000 00111234789999999
Q ss_pred eCCCCCCCcHHH-----HHHHHHHcCCCeEEEecCCCCCCCcCChHHHHHHHHHHHhhc
Q 015755 219 DTNDYCATSQQL-----KDQLSERYSGARQAYMKTGGEFPFLSRPDEVNLHLQLHLRRV 272 (401)
Q Consensus 219 G~~D~~~~~~~~-----~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~~~ 272 (401)
|++| .++|... .+.+.+.+|++++++++++||++++|+|+++++.|.+||++.
T Consensus 300 G~~D-~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 300 GDQD-PFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQL 357 (360)
T ss_pred eCCC-CCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 9999 5676652 345667789999999999999999999999999999999864
No 8
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.97 E-value=2.4e-28 Score=224.21 Aligned_cols=249 Identities=16% Similarity=0.183 Sum_probs=167.7
Q ss_pred ceEEEeeCCeeEEEEEcCCCCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC----------ChHHHHHHH
Q 015755 19 PLHKIPIGTKQWRYYDFGPKVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW----------NHHEWIQAF 88 (401)
Q Consensus 19 ~~~~~~~~~~~l~y~~~G~~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~----------s~~~~a~dl 88 (401)
..+.+++++.+++|...|+.++|+|||+||++++...|..++..|. ++|+|+++|+|||| +++++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l 85 (278)
T TIGR03056 7 CSRRVTVGPFHWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLA-RSFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDL 85 (278)
T ss_pred ccceeeECCEEEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHh-hCcEEEeecCCCCCCCCCccccCCCHHHHHHHH
Confidence 3567788999999999998778999999999999999999999998 57999999999986 467899999
Q ss_pred HHHHHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhh--cCC----cccccccchhhHHHHHHh-
Q 015755 89 EKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAA--AMP----WAPIVSWTPSFLLKRYVL- 161 (401)
Q Consensus 89 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~- 161 (401)
.+++++++.++++|+||||||.+++.+|.++|++++++|++++......... ... ............ .....
T Consensus 86 ~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 164 (278)
T TIGR03056 86 SALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMM-SRGAAD 164 (278)
T ss_pred HHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHH-Hhhccc
Confidence 9999999999999999999999999999999999999999987543211000 000 000000000000 00000
Q ss_pred ----hccCCCCCCCchhhhHHHHHHhhhhcC-HHHHHHHhhh-hcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHH
Q 015755 162 ----TGIHDGPHEPFIADSVDFVVCQVETLS-REDLASRLTL-TADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLS 235 (401)
Q Consensus 162 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~ 235 (401)
..................+........ .......+.. ...........+++|+++|+|++| .+++.+..+.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D-~~vp~~~~~~~~ 243 (278)
T TIGR03056 165 QQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEED-KAVPPDESKRAA 243 (278)
T ss_pred CcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCC-cccCHHHHHHHH
Confidence 000000000000000111110000000 0000000000 000001112346789999999999 688999999999
Q ss_pred HHcCCCeEEEecCCCCCCCcCChHHHHHHHHHHHh
Q 015755 236 ERYSGARQAYMKTGGEFPFLSRPDEVNLHLQLHLR 270 (401)
Q Consensus 236 ~~~~~~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~ 270 (401)
+.+++++++.++++||++++++|+++++.|.+|++
T Consensus 244 ~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 244 TRVPTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred HhccCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999984
No 9
>PLN02965 Probable pheophorbidase
Probab=99.97 E-value=3.7e-29 Score=227.01 Aligned_cols=224 Identities=15% Similarity=0.154 Sum_probs=149.0
Q ss_pred cEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC----------ChHHHHHHHHHHHHHhCC-ceEEEEEEchhHH
Q 015755 42 PLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW----------NHHEWIQAFEKFLDAIDV-HHIHLYGTSLGGF 110 (401)
Q Consensus 42 ~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~----------s~~~~a~dl~~~l~~l~~-~~v~lvGhS~Gg~ 110 (401)
+|||+||++.+...|..++..|.+++|+|+++|+|||| +++++++|+.++++.++. ++++++||||||.
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ 84 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGGG 84 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcchH
Confidence 59999999999999999999997679999999999985 467899999999999987 4999999999999
Q ss_pred HHHHHHHhCCcccceEEEecCCCCChh---HhhcCCcccccccchhhHHHHHHhhccCCCCCCCchhhhHHHHHHh-hhh
Q 015755 111 LAQLFAQHRPRRVRSLVLSNTFLDTHS---FAAAMPWAPIVSWTPSFLLKRYVLTGIHDGPHEPFIADSVDFVVCQ-VET 186 (401)
Q Consensus 111 ia~~~A~~~P~~V~~lvli~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 186 (401)
+++.+|.++|++|+++|++++.....+ ......+... ... . ................... ....... ...
T Consensus 85 ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~---~~~-~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 158 (255)
T PLN02965 85 SVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEG---TEK-I-WDYTFGEGPDKPPTGIMMK-PEFVRHYYYNQ 158 (255)
T ss_pred HHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhc---ccc-c-eeeeeccCCCCCcchhhcC-HHHHHHHHhcC
Confidence 999999999999999999998632111 0000000000 000 0 0000000000000000000 0000000 000
Q ss_pred cCHHHHHH---Hhhh-------hcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEEEecCCCCCCCcC
Q 015755 187 LSREDLAS---RLTL-------TADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFLS 256 (401)
Q Consensus 187 ~~~~~~~~---~~~~-------~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e 256 (401)
........ .+.. ...........+++|+++|+|++| .++++...+.+++.++++++++++++||++++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D-~~~~~~~~~~~~~~~~~a~~~~i~~~GH~~~~e 237 (255)
T PLN02965 159 SPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKD-NLFDPVRQDVMVENWPPAQTYVLEDSDHSAFFS 237 (255)
T ss_pred CCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCC-CCCCHHHHHHHHHhCCcceEEEecCCCCchhhc
Confidence 00000000 0000 000000011247899999999999 789999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhhc
Q 015755 257 RPDEVNLHLQLHLRRV 272 (401)
Q Consensus 257 ~p~~v~~~i~~fl~~~ 272 (401)
+|++|++.|.+|++..
T Consensus 238 ~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 238 VPTTLFQYLLQAVSSL 253 (255)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999998764
No 10
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.96 E-value=7.2e-29 Score=225.30 Aligned_cols=229 Identities=18% Similarity=0.147 Sum_probs=149.0
Q ss_pred EEEEEcCCCCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC--------ChHHHHHHHHHHHHHhCCceEE
Q 015755 30 WRYYDFGPKVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW--------NHHEWIQAFEKFLDAIDVHHIH 101 (401)
Q Consensus 30 l~y~~~G~~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~--------s~~~~a~dl~~~l~~l~~~~v~ 101 (401)
++|...|.+ .|+|||+||++++...|..++..|. ++|+|+++|+|||| +++++++++. ++..++++
T Consensus 4 ~~y~~~G~g-~~~ivllHG~~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~l~----~~~~~~~~ 77 (256)
T PRK10349 4 IWWQTKGQG-NVHLVLLHGWGLNAEVWRCIDEELS-SHFTLHLVDLPGFGRSRGFGALSLADMAEAVL----QQAPDKAI 77 (256)
T ss_pred cchhhcCCC-CCeEEEECCCCCChhHHHHHHHHHh-cCCEEEEecCCCCCCCCCCCCCCHHHHHHHHH----hcCCCCeE
Confidence 678888853 3469999999999999999999998 56999999999997 4455555544 35678999
Q ss_pred EEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCccccc-ccch----------hhHHHHHHhhccCCCCCC
Q 015755 102 LYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIV-SWTP----------SFLLKRYVLTGIHDGPHE 170 (401)
Q Consensus 102 lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~-~~~~----------~~~~~~~~~~~~~~~~~~ 170 (401)
+|||||||.+|+.+|.++|++|+++|++++.+...... .+.... .+.. ......++...... .
T Consensus 78 lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 151 (256)
T PRK10349 78 WLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARD---EWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMG---T 151 (256)
T ss_pred EEEECHHHHHHHHHHHhChHhhheEEEecCccceecCC---CCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHcc---C
Confidence 99999999999999999999999999999854321100 000000 0000 00011111000000 0
Q ss_pred CchhhhHHHHHHhhhh---cCHHHHHHHhhhhc-ccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEEEe
Q 015755 171 PFIADSVDFVVCQVET---LSREDLASRLTLTA-DAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYM 246 (401)
Q Consensus 171 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~~i 246 (401)
.........+...... .....+........ .........+++|+++|+|++| .+++.+..+.+.+.+++++++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D-~~~~~~~~~~~~~~i~~~~~~~i 230 (256)
T PRK10349 152 ETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLD-GLVPRKVVPMLDKLWPHSESYIF 230 (256)
T ss_pred chHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCC-ccCCHHHHHHHHHhCCCCeEEEe
Confidence 0000000011110000 00111111111000 0111122347899999999999 68899999999999999999999
Q ss_pred cCCCCCCCcCChHHHHHHHHHHHhh
Q 015755 247 KTGGEFPFLSRPDEVNLHLQLHLRR 271 (401)
Q Consensus 247 ~~~GH~~~~e~p~~v~~~i~~fl~~ 271 (401)
+++||++++|+|++|++.+.+|-++
T Consensus 231 ~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 231 AKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred CCCCCCccccCHHHHHHHHHHHhcc
Confidence 9999999999999999999999764
No 11
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.96 E-value=4.7e-28 Score=229.55 Aligned_cols=246 Identities=13% Similarity=0.119 Sum_probs=164.3
Q ss_pred EEeeCCeeEEEEEcCCCCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC-------------ChHHHHHHH
Q 015755 22 KIPIGTKQWRYYDFGPKVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW-------------NHHEWIQAF 88 (401)
Q Consensus 22 ~~~~~~~~l~y~~~G~~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~-------------s~~~~a~dl 88 (401)
.++.++.+++|...|++++|+|||+||++.+...|..++..|. ++|+|+++|+|||| +++++++++
T Consensus 109 ~~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l 187 (383)
T PLN03084 109 QASSDLFRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLS-KNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSL 187 (383)
T ss_pred EEcCCceEEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHh-cCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHH
Confidence 5667899999999998778999999999999999999999998 58999999999985 567899999
Q ss_pred HHHHHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHH----HHHhhcc
Q 015755 89 EKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLK----RYVLTGI 164 (401)
Q Consensus 89 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 164 (401)
..+++++++++++|+|||+||.+++.+|.++|++|+++|++++.......................... ......+
T Consensus 188 ~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~~~~~ 267 (383)
T PLN03084 188 ESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRASDKAL 267 (383)
T ss_pred HHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHHHHhhhh
Confidence 999999999999999999999999999999999999999999864321100000000000000000000 0000000
Q ss_pred CCCCCCCchhhhHHHHHHhhhhcC--HHHH---HHHhhhhcc------cccccccccCCcEEEEEeCCCCCCCcHHHHHH
Q 015755 165 HDGPHEPFIADSVDFVVCQVETLS--REDL---ASRLTLTAD------AASVGNLLLSDSHITIMDTNDYCATSQQLKDQ 233 (401)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~------~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~ 233 (401)
..........+....+........ ...+ ...+..... ...+....+++|+++|+|++| .+++.+..+.
T Consensus 268 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D-~~v~~~~~~~ 346 (383)
T PLN03084 268 TSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRD-RWLNYDGVED 346 (383)
T ss_pred cccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCC-CCcCHHHHHH
Confidence 000000001111111111000000 0000 000000000 000111246889999999999 6888888888
Q ss_pred HHHHcCCCeEEEecCCCCCCCcCChHHHHHHHHHHHh
Q 015755 234 LSERYSGARQAYMKTGGEFPFLSRPDEVNLHLQLHLR 270 (401)
Q Consensus 234 ~~~~~~~~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~ 270 (401)
+.+. +++++++++++||++++|+|+++++.|.+|+.
T Consensus 347 ~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 347 FCKS-SQHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred HHHh-cCCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 8887 48899999999999999999999999999986
No 12
>PRK06489 hypothetical protein; Provisional
Probab=99.96 E-value=4.2e-28 Score=230.88 Aligned_cols=248 Identities=16% Similarity=0.191 Sum_probs=157.3
Q ss_pred eeCCeeEEEEEcCCCC-------CCcEEEeCCCCCChHHHH--HHHHHH-------hhCCcEEEEecCCCCC--------
Q 015755 24 PIGTKQWRYYDFGPKV-------VPPLICLPGTAGTAEVYY--KQIMAL-------SMKGYRVISVDIPRVW-------- 79 (401)
Q Consensus 24 ~~~~~~l~y~~~G~~~-------~p~vvllHG~~~~~~~~~--~~~~~L-------~~~g~~Vi~~D~pG~~-------- 79 (401)
++++.+++|...|+++ +|+|||+||++++...|. .+...| ..++|+||++|+||||
T Consensus 46 ~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~ 125 (360)
T PRK06489 46 TLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG 125 (360)
T ss_pred CcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC
Confidence 4678999999999865 799999999999998886 444444 1367999999999996
Q ss_pred --------ChHHHHHHHHHHH-HHhCCceEE-EEEEchhHHHHHHHHHhCCcccceEEEecCCCCCh---hHhhc-----
Q 015755 80 --------NHHEWIQAFEKFL-DAIDVHHIH-LYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTH---SFAAA----- 141 (401)
Q Consensus 80 --------s~~~~a~dl~~~l-~~l~~~~v~-lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~---~~~~~----- 141 (401)
+++++++++..++ +++++++++ ++||||||++|+.+|.++|++|+++|++++..... .+...
T Consensus 126 ~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~ 205 (360)
T PRK06489 126 LRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIE 205 (360)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHH
Confidence 2457788877754 889999885 89999999999999999999999999998754211 00000
Q ss_pred --C---Cccc-ccccchhhHHHH--HHhh-------cc-CCCCCCCchhhhHHHHHHhhhhcCHHHHHHHhhhhccc-cc
Q 015755 142 --M---PWAP-IVSWTPSFLLKR--YVLT-------GI-HDGPHEPFIADSVDFVVCQVETLSREDLASRLTLTADA-AS 204 (401)
Q Consensus 142 --~---~~~~-~~~~~~~~~~~~--~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 204 (401)
. .+.. .....+...... .... .. .............+.............+...+...... ..
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 285 (360)
T PRK06489 206 SIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRDYNPS 285 (360)
T ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccChH
Confidence 0 0000 000000000000 0000 00 00000000011111111111111111111111110000 11
Q ss_pred ccccccCCcEEEEEeCCCCCCCcHHHH--HHHHHHcCCCeEEEecCC----CCCCCcCChHHHHHHHHHHHhhcc
Q 015755 205 VGNLLLSDSHITIMDTNDYCATSQQLK--DQLSERYSGARQAYMKTG----GEFPFLSRPDEVNLHLQLHLRRVG 273 (401)
Q Consensus 205 ~~~~~i~~Pvlli~G~~D~~~~~~~~~--~~~~~~~~~~~~~~i~~~----GH~~~~e~p~~v~~~i~~fl~~~~ 273 (401)
.....+++|+|+|+|++| .++|++.. +.+++.+|++++++++++ ||.++ ++|++|++.|.+||+.+.
T Consensus 286 ~~L~~I~~PvLvI~G~~D-~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 286 PDLEKIKAPVLAINSADD-ERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred HHHHhCCCCEEEEecCCC-cccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhcc
Confidence 122347899999999999 67887765 789999999999999996 99997 899999999999998765
No 13
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.96 E-value=4.7e-28 Score=223.05 Aligned_cols=237 Identities=21% Similarity=0.185 Sum_probs=154.4
Q ss_pred CeeEEEEEcCCCCCCcEEEeCCCCCChHHHHH---HHHHHhhCCcEEEEecCCCCCChH----------HHHHHHHHHHH
Q 015755 27 TKQWRYYDFGPKVVPPLICLPGTAGTAEVYYK---QIMALSMKGYRVISVDIPRVWNHH----------EWIQAFEKFLD 93 (401)
Q Consensus 27 ~~~l~y~~~G~~~~p~vvllHG~~~~~~~~~~---~~~~L~~~g~~Vi~~D~pG~~s~~----------~~a~dl~~~l~ 93 (401)
+.+++|...|. +|+|||+||++++...|.. .+..+.++||+|+++|+||||.++ .+++++.++++
T Consensus 19 ~~~~~y~~~g~--~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~ 96 (282)
T TIGR03343 19 NFRIHYNEAGN--GEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMD 96 (282)
T ss_pred ceeEEEEecCC--CCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHH
Confidence 56799998874 6899999999988877754 345666578999999999997432 35789999999
Q ss_pred HhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCC---ccccc----ccchhhHHHHHHhhccCC
Q 015755 94 AIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMP---WAPIV----SWTPSFLLKRYVLTGIHD 166 (401)
Q Consensus 94 ~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~ 166 (401)
+++.++++++||||||++++.+|.++|++|+++|++++............ +.... ..... ............
T Consensus 97 ~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 175 (282)
T TIGR03343 97 ALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYE-TLKQMLNVFLFD 175 (282)
T ss_pred HcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHH-HHHHHHhhCccC
Confidence 99999999999999999999999999999999999997532111000000 00000 00000 001111000000
Q ss_pred CCCCCchhhhHHHHHHhhhhcCHHHHHHHhhhh------cccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCC
Q 015755 167 GPHEPFIADSVDFVVCQVETLSREDLASRLTLT------ADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSG 240 (401)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~ 240 (401)
. ........+........ ............ ..........+++|+++|+|++| .+++.+..+.+++.+|+
T Consensus 176 ~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D-~~v~~~~~~~~~~~~~~ 251 (282)
T TIGR03343 176 Q--SLITEELLQGRWENIQR-QPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDD-RFVPLDHGLKLLWNMPD 251 (282)
T ss_pred c--ccCcHHHHHhHHHHhhc-CHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCC-CcCCchhHHHHHHhCCC
Confidence 0 00000011100000000 011110100000 00001112357899999999999 68888999999999999
Q ss_pred CeEEEecCCCCCCCcCChHHHHHHHHHHHh
Q 015755 241 ARQAYMKTGGEFPFLSRPDEVNLHLQLHLR 270 (401)
Q Consensus 241 ~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~ 270 (401)
+++++++++||+++.|+|++|++.|.+|++
T Consensus 252 ~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 252 AQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred CEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 999999999999999999999999999986
No 14
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=1.8e-28 Score=231.94 Aligned_cols=254 Identities=19% Similarity=0.234 Sum_probs=163.2
Q ss_pred CCceEEEeeCCeeEEEEEcCCCCCCcEEEeCCCCCChH------------HHHHHHH---HHhhCCcEEEEecCCCCC--
Q 015755 17 QVPLHKIPIGTKQWRYYDFGPKVVPPLICLPGTAGTAE------------VYYKQIM---ALSMKGYRVISVDIPRVW-- 79 (401)
Q Consensus 17 ~~~~~~~~~~~~~l~y~~~G~~~~p~vvllHG~~~~~~------------~~~~~~~---~L~~~g~~Vi~~D~pG~~-- 79 (401)
.......++++.+++|...|++ ++++||+||++++.. .|..++. .|..++|+||++|+|||+
T Consensus 35 ~~~~~~~~~~~~~l~y~~~G~~-~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s 113 (343)
T PRK08775 35 PLSMRHAGLEDLRLRYELIGPA-GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGS 113 (343)
T ss_pred ceeecCCCCCCceEEEEEeccC-CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCC
Confidence 4445566778999999999964 446777777777665 5777775 564357999999999995
Q ss_pred -----ChHHHHHHHHHHHHHhCCceE-EEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhc-C---Ccc-ccc
Q 015755 80 -----NHHEWIQAFEKFLDAIDVHHI-HLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAA-M---PWA-PIV 148 (401)
Q Consensus 80 -----s~~~~a~dl~~~l~~l~~~~v-~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~-~---~~~-~~~ 148 (401)
+++++++|+.+++++++++++ +++||||||++|+.+|.++|++|++||++++.......... . ... ...
T Consensus 114 ~~~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~~ 193 (343)
T PRK08775 114 LDVPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQRRAVALG 193 (343)
T ss_pred CCCCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHHHHHHcC
Confidence 578999999999999999775 79999999999999999999999999999986543211100 0 000 000
Q ss_pred -c---cchh-hHHHH----------HHhhccCCCCC---CCchhhhHHHHH----HhhhhcCHHHHHHHhhhhccccccc
Q 015755 149 -S---WTPS-FLLKR----------YVLTGIHDGPH---EPFIADSVDFVV----CQVETLSREDLASRLTLTADAASVG 206 (401)
Q Consensus 149 -~---~~~~-~~~~~----------~~~~~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (401)
. .... ..... .+...+..... ............ ..........+...... .......
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 272 (343)
T PRK08775 194 QLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSES-IDLHRVD 272 (343)
T ss_pred CCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHH-HhhcCCC
Confidence 0 0000 00000 00000100000 000000111111 11111111111111100 0001111
Q ss_pred ccccCCcEEEEEeCCCCCCCcHHHHHHHHHHc-CCCeEEEecC-CCCCCCcCChHHHHHHHHHHHhhcc
Q 015755 207 NLLLSDSHITIMDTNDYCATSQQLKDQLSERY-SGARQAYMKT-GGEFPFLSRPDEVNLHLQLHLRRVG 273 (401)
Q Consensus 207 ~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~-~GH~~~~e~p~~v~~~i~~fl~~~~ 273 (401)
...+++|+|+|+|++| .+++.+..+.+.+.+ |+++++++++ +||++++|+|++|++.|.+||++..
T Consensus 273 l~~I~~PtLvi~G~~D-~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 273 PEAIRVPTVVVAVEGD-RLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRSTG 340 (343)
T ss_pred hhcCCCCeEEEEeCCC-EeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhcc
Confidence 3457899999999999 688888888888877 6999999985 9999999999999999999998765
No 15
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.96 E-value=7.1e-28 Score=218.48 Aligned_cols=231 Identities=16% Similarity=0.162 Sum_probs=155.6
Q ss_pred EEEEEc---CCCCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC--------ChHHHHHHHHHHHHHhCCc
Q 015755 30 WRYYDF---GPKVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW--------NHHEWIQAFEKFLDAIDVH 98 (401)
Q Consensus 30 l~y~~~---G~~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~--------s~~~~a~dl~~~l~~l~~~ 98 (401)
++|+.. ++.++|+|||+||++++...|..++..|. ++|+|+++|+|||| +++++++|+.+++++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l~~~ 81 (255)
T PRK10673 3 LNIRAQTAQNPHNNSPIVLVHGLFGSLDNLGVLARDLV-NDHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDALQIE 81 (255)
T ss_pred ceeeeccCCCCCCCCCEEEECCCCCchhHHHHHHHHHh-hCCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 455553 33467899999999999999999999998 57999999999986 6789999999999999999
Q ss_pred eEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCc-cccc-----ccchhhHHHHHHhhccCCCCCCCc
Q 015755 99 HIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPW-APIV-----SWTPSFLLKRYVLTGIHDGPHEPF 172 (401)
Q Consensus 99 ~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 172 (401)
+++++||||||.+++.+|.++|++|+++|++++.+........... .... ...............+. .
T Consensus 82 ~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-- 155 (255)
T PRK10673 82 KATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLN----E-- 155 (255)
T ss_pred ceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcC----C--
Confidence 9999999999999999999999999999999864322100000000 0000 00000000000000000 0
Q ss_pred hhhhHHHHHHhhhh----cCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEEEecC
Q 015755 173 IADSVDFVVCQVET----LSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKT 248 (401)
Q Consensus 173 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~ 248 (401)
............. .........+..... ......+++|+++|+|++| ..++.+..+.+.+.+++++++++++
T Consensus 156 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~l~i~G~~D-~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (255)
T PRK10673 156 -EGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVG--WEKIPAWPHPALFIRGGNS-PYVTEAYRDDLLAQFPQARAHVIAG 231 (255)
T ss_pred -HHHHHHHHhcCCcceeEeeHHHHHHhHHHHhC--CcccCCCCCCeEEEECCCC-CCCCHHHHHHHHHhCCCcEEEEeCC
Confidence 0000011000000 000101111110000 0112346799999999999 6888999999999999999999999
Q ss_pred CCCCCCcCChHHHHHHHHHHHhh
Q 015755 249 GGEFPFLSRPDEVNLHLQLHLRR 271 (401)
Q Consensus 249 ~GH~~~~e~p~~v~~~i~~fl~~ 271 (401)
+||++++++|+++++.|.+||+.
T Consensus 232 ~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 232 AGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred CCCeeeccCHHHHHHHHHHHHhc
Confidence 99999999999999999999974
No 16
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.96 E-value=1.5e-27 Score=230.35 Aligned_cols=254 Identities=16% Similarity=0.148 Sum_probs=164.1
Q ss_pred cCCceEEEeeCCeeEEEEEcCCCC---CCcEEEeCCCCCChHHHHH-HHHHHh---hCCcEEEEecCCCCC---------
Q 015755 16 SQVPLHKIPIGTKQWRYYDFGPKV---VPPLICLPGTAGTAEVYYK-QIMALS---MKGYRVISVDIPRVW--------- 79 (401)
Q Consensus 16 ~~~~~~~~~~~~~~l~y~~~G~~~---~p~vvllHG~~~~~~~~~~-~~~~L~---~~g~~Vi~~D~pG~~--------- 79 (401)
..+.....++++.+++|...|+.+ +|+|||+||++++...|.. ++..|. .++|+|+++|+||||
T Consensus 174 ~~~~~~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ 253 (481)
T PLN03087 174 CKFCTSWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSL 253 (481)
T ss_pred cceeeeeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCc
Confidence 345566778888999999999754 4799999999999999985 345554 258999999999986
Q ss_pred -ChHHHHHHHH-HHHHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHh-----hcC-Ccccccccc
Q 015755 80 -NHHEWIQAFE-KFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFA-----AAM-PWAPIVSWT 151 (401)
Q Consensus 80 -s~~~~a~dl~-~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~-----~~~-~~~~~~~~~ 151 (401)
+++++++++. .++++++.++++++||||||++++.+|.++|++|+++|++++........ ... .......+.
T Consensus 254 ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (481)
T PLN03087 254 YTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWP 333 (481)
T ss_pred CCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCC
Confidence 4577888984 88999999999999999999999999999999999999999754321100 000 000000000
Q ss_pred h---hhHHHHHHhhccCCCC------CCCchhhh---------HHHHHHhhhhc-CH---HHHHHHhhhhc--cccccc-
Q 015755 152 P---SFLLKRYVLTGIHDGP------HEPFIADS---------VDFVVCQVETL-SR---EDLASRLTLTA--DAASVG- 206 (401)
Q Consensus 152 ~---~~~~~~~~~~~~~~~~------~~~~~~~~---------~~~~~~~~~~~-~~---~~~~~~~~~~~--~~~~~~- 206 (401)
. ......+.. ...... ........ ........... .. ..+...+.... ......
T Consensus 334 ~~~~~~~~~~w~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~ 412 (481)
T PLN03087 334 PIAFGASVACWYE-HISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDH 412 (481)
T ss_pred ccccchhHHHHHH-HHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHH
Confidence 0 000000000 000000 00000000 00000000000 00 00000000000 000000
Q ss_pred -ccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEEEecCCCCCCCc-CChHHHHHHHHHHHhh
Q 015755 207 -NLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFL-SRPDEVNLHLQLHLRR 271 (401)
Q Consensus 207 -~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~-e~p~~v~~~i~~fl~~ 271 (401)
...+++|+++|+|++| .++|++..+.+++.+|++++++++++||++++ ++|+++++.|.+|++.
T Consensus 413 l~~~I~vPtLII~Ge~D-~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 413 VRDQLKCDVAIFHGGDD-ELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred HHHhCCCCEEEEEECCC-CCCCHHHHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 1137899999999999 68999999999999999999999999999986 9999999999999864
No 17
>PLN02578 hydrolase
Probab=99.96 E-value=3.3e-27 Score=224.06 Aligned_cols=243 Identities=18% Similarity=0.133 Sum_probs=162.5
Q ss_pred EEEeeCCeeEEEEEcCCCCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC---------ChHHHHHHHHHH
Q 015755 21 HKIPIGTKQWRYYDFGPKVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW---------NHHEWIQAFEKF 91 (401)
Q Consensus 21 ~~~~~~~~~l~y~~~G~~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~---------s~~~~a~dl~~~ 91 (401)
.+++.++.+++|...|+ +|+|||+||++++...|..+++.|. ++|+|+++|+|||| +.+.+++++.++
T Consensus 69 ~~~~~~~~~i~Y~~~g~--g~~vvliHG~~~~~~~w~~~~~~l~-~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~ 145 (354)
T PLN02578 69 NFWTWRGHKIHYVVQGE--GLPIVLIHGFGASAFHWRYNIPELA-KKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADF 145 (354)
T ss_pred eEEEECCEEEEEEEcCC--CCeEEEECCCCCCHHHHHHHHHHHh-cCCEEEEECCCCCCCCCCcccccCHHHHHHHHHHH
Confidence 55677899999999884 6899999999999999999999998 57999999999985 457788999999
Q ss_pred HHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcc-c-ccccchh----h---HHHHHH--
Q 015755 92 LDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWA-P-IVSWTPS----F---LLKRYV-- 160 (401)
Q Consensus 92 l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~-~-~~~~~~~----~---~~~~~~-- 160 (401)
++.+..++++++||||||++++.+|.++|++|+++|++++.............. . ....... . ...+..
T Consensus 146 i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (354)
T PLN02578 146 VKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLG 225 (354)
T ss_pred HHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHH
Confidence 999998999999999999999999999999999999998753221100000000 0 0000000 0 000000
Q ss_pred ----------------hhccCCCCCCCchhhhHHHHHHhhhhc-CHHHHHHHhhh----hccc-ccccccccCCcEEEEE
Q 015755 161 ----------------LTGIHDGPHEPFIADSVDFVVCQVETL-SREDLASRLTL----TADA-ASVGNLLLSDSHITIM 218 (401)
Q Consensus 161 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~-~~~~~~~i~~Pvlli~ 218 (401)
...+... ........+......... ....+...+.. .... .......+++|+++|+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~ 303 (354)
T PLN02578 226 FLFWQAKQPSRIESVLKSVYKDK--SNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLW 303 (354)
T ss_pred HHHHHhcCHHHHHHHHHHhcCCc--ccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEE
Confidence 0000000 000000011110000000 01111111100 0000 0011234789999999
Q ss_pred eCCCCCCCcHHHHHHHHHHcCCCeEEEecCCCCCCCcCChHHHHHHHHHHHh
Q 015755 219 DTNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFLSRPDEVNLHLQLHLR 270 (401)
Q Consensus 219 G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~ 270 (401)
|++| .+++.+..+.+.+.+|+++++++ ++||++++|+|+++++.|.+|++
T Consensus 304 G~~D-~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 304 GDLD-PWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred eCCC-CCCCHHHHHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 9999 68899999999999999999999 69999999999999999999986
No 18
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.96 E-value=1.5e-27 Score=214.31 Aligned_cols=237 Identities=22% Similarity=0.279 Sum_probs=158.8
Q ss_pred eEEEEEcCCC-CCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC---------ChHHHHHHHHHHHHHhCCc
Q 015755 29 QWRYYDFGPK-VVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW---------NHHEWIQAFEKFLDAIDVH 98 (401)
Q Consensus 29 ~l~y~~~G~~-~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~---------s~~~~a~dl~~~l~~l~~~ 98 (401)
+++|...|++ ++|+|||+||++.+...|.+++..|. ++|+|+++|+|||| +.+++++++.++++.++.+
T Consensus 1 ~~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~ 79 (251)
T TIGR02427 1 RLHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALT-PDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLGIE 79 (251)
T ss_pred CceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhh-cccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 3678888875 67899999999999999999999887 68999999999985 5688999999999999999
Q ss_pred eEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChh---HhhcCCcccccccchhhHHHHHHhhccCCCCCCCchhh
Q 015755 99 HIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHS---FAAAMPWAPIVSWTPSFLLKRYVLTGIHDGPHEPFIAD 175 (401)
Q Consensus 99 ~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (401)
+++++||||||++++.+|.++|++|+++|++++...... +...... .................+........ ..
T Consensus 80 ~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 156 (251)
T TIGR02427 80 RAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAA--VRAEGLAALADAVLERWFTPGFREAH-PA 156 (251)
T ss_pred ceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhh--hhhccHHHHHHHHHHHHcccccccCC-hH
Confidence 999999999999999999999999999999987543211 1000000 00000000000001011111000000 00
Q ss_pred hHHHHHHhhhhcCHHHHHHHhhhhcccc-cccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEEEecCCCCCCC
Q 015755 176 SVDFVVCQVETLSREDLASRLTLTADAA-SVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPF 254 (401)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~ 254 (401)
....+...........+........... ......+++|+++++|++| .+++.+..+.+.+.+++.++++++++||+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D-~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 235 (251)
T TIGR02427 157 RLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQD-GSTPPELVREIADLVPGARFAEIRGAGHIPC 235 (251)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccC-CcCChHHHHHHHHhCCCceEEEECCCCCccc
Confidence 1111111111111111111110000000 1112346789999999999 6888888889999999999999999999999
Q ss_pred cCChHHHHHHHHHHHh
Q 015755 255 LSRPDEVNLHLQLHLR 270 (401)
Q Consensus 255 ~e~p~~v~~~i~~fl~ 270 (401)
+++|+++++.|.+|++
T Consensus 236 ~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 236 VEQPEAFNAALRDFLR 251 (251)
T ss_pred ccChHHHHHHHHHHhC
Confidence 9999999999999974
No 19
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.96 E-value=1.9e-27 Score=215.09 Aligned_cols=239 Identities=18% Similarity=0.222 Sum_probs=156.6
Q ss_pred EEEEEcCC--CCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC----------ChHHHHHHHHHHHHHhCC
Q 015755 30 WRYYDFGP--KVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW----------NHHEWIQAFEKFLDAIDV 97 (401)
Q Consensus 30 l~y~~~G~--~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~----------s~~~~a~dl~~~l~~l~~ 97 (401)
++|...|+ .++|+|||+||++++...|..++..|. ++|+|+++|+|||| +++++++++.+++++++.
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~ 79 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLT-QRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNI 79 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHH-hccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCC
Confidence 46777886 457899999999999999999998887 57999999999985 468899999999999999
Q ss_pred ceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcC--Ccccc-cccchhhHHHHHHhhccCCCCCCCchh
Q 015755 98 HHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAM--PWAPI-VSWTPSFLLKRYVLTGIHDGPHEPFIA 174 (401)
Q Consensus 98 ~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (401)
++++++||||||++++.+|.++|++|+++|++++........... ..... ...........................
T Consensus 80 ~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (257)
T TIGR03611 80 ERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAA 159 (257)
T ss_pred CcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccch
Confidence 999999999999999999999999999999999865432111000 00000 000000000000000000000000000
Q ss_pred hhHHHHHHhhhhc-CHHHHHHHhhh-hcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEEEecCCCCC
Q 015755 175 DSVDFVVCQVETL-SREDLASRLTL-TADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEF 252 (401)
Q Consensus 175 ~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~ 252 (401)
............. ........+.. ...........+++|+++++|++| .+++.+..+.+.+.+++++++.++++||+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D-~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 238 (257)
T TIGR03611 160 RLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDD-MLVPYTQSLRLAAALPNAQLKLLPYGGHA 238 (257)
T ss_pred hhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcC-cccCHHHHHHHHHhcCCceEEEECCCCCC
Confidence 0000000000000 00111111100 000011122346789999999999 68899999999999999999999999999
Q ss_pred CCcCChHHHHHHHHHHHh
Q 015755 253 PFLSRPDEVNLHLQLHLR 270 (401)
Q Consensus 253 ~~~e~p~~v~~~i~~fl~ 270 (401)
+++++|+++++.|.+||+
T Consensus 239 ~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 239 SNVTDPETFNRALLDFLK 256 (257)
T ss_pred ccccCHHHHHHHHHHHhc
Confidence 999999999999999986
No 20
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.95 E-value=2.8e-27 Score=224.45 Aligned_cols=246 Identities=14% Similarity=0.110 Sum_probs=158.6
Q ss_pred EEeeCCeeEEEEEcCCC---CCCcEEEeCCCCCChHH-HHHHHHHHhhCCcEEEEecCCCCC----------ChHHHHHH
Q 015755 22 KIPIGTKQWRYYDFGPK---VVPPLICLPGTAGTAEV-YYKQIMALSMKGYRVISVDIPRVW----------NHHEWIQA 87 (401)
Q Consensus 22 ~~~~~~~~l~y~~~G~~---~~p~vvllHG~~~~~~~-~~~~~~~L~~~g~~Vi~~D~pG~~----------s~~~~a~d 87 (401)
.++.+|.+++|+.+++. .+++|||+||++++... |..++..|.+.||+|+++|+|||| +++++++|
T Consensus 66 ~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~d 145 (349)
T PLN02385 66 EVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDD 145 (349)
T ss_pred EEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHH
Confidence 44568899999998863 35689999999998764 578888998779999999999996 45778999
Q ss_pred HHHHHHHhCCc------eEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHh
Q 015755 88 FEKFLDAIDVH------HIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVL 161 (401)
Q Consensus 88 l~~~l~~l~~~------~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (401)
+.++++.+... +++|+||||||++++.+|.++|++|.++|+++|.......... .+ ..... .. .......
T Consensus 146 v~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~-~~-~~~~~-~~-~~~~~~p 221 (349)
T PLN02385 146 VIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVP-PP-LVLQI-LI-LLANLLP 221 (349)
T ss_pred HHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccC-ch-HHHHH-HH-HHHHHCC
Confidence 99998877543 7999999999999999999999999999999986542110000 00 00000 00 0000000
Q ss_pred hc-cC-C-CCCCCchhhh-HHHHHHh----hh-hcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHH
Q 015755 162 TG-IH-D-GPHEPFIADS-VDFVVCQ----VE-TLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKD 232 (401)
Q Consensus 162 ~~-~~-~-~~~~~~~~~~-~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~ 232 (401)
.. +. . .......... ....... .. ..........+.... ........+++|+|+|+|++| .+++....+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~l~~i~~P~Lii~G~~D-~vv~~~~~~ 299 (349)
T PLN02385 222 KAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQ-EIEMQLEEVSLPLLILHGEAD-KVTDPSVSK 299 (349)
T ss_pred CceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHH-HHHHhcccCCCCEEEEEeCCC-CccChHHHH
Confidence 00 00 0 0000000000 0000000 00 000000111111000 001112347899999999999 689999999
Q ss_pred HHHHHc--CCCeEEEecCCCCCCCcCChHH----HHHHHHHHHhhcc
Q 015755 233 QLSERY--SGARQAYMKTGGEFPFLSRPDE----VNLHLQLHLRRVG 273 (401)
Q Consensus 233 ~~~~~~--~~~~~~~i~~~GH~~~~e~p~~----v~~~i~~fl~~~~ 273 (401)
.+.+.+ +++++++++++||+++.++|++ +.+.|.+||++..
T Consensus 300 ~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 300 FLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred HHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 998887 5689999999999999999987 8888999998653
No 21
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.95 E-value=6.8e-27 Score=213.73 Aligned_cols=239 Identities=15% Similarity=0.189 Sum_probs=156.1
Q ss_pred CCeeEEEEEcCCCCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC----------ChHHHHHHHHHHHHHh
Q 015755 26 GTKQWRYYDFGPKVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW----------NHHEWIQAFEKFLDAI 95 (401)
Q Consensus 26 ~~~~l~y~~~G~~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~----------s~~~~a~dl~~~l~~l 95 (401)
+|.+++|..-+ +++|+|||+||++.+...|.++...|.++||+|+++|+|||+ +++++++++.++++++
T Consensus 5 ~~~~~~~~~~~-~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l 83 (273)
T PLN02211 5 NGEEVTDMKPN-RQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSL 83 (273)
T ss_pred ccccccccccc-CCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhc
Confidence 56667776632 357899999999999999999999998779999999999986 5678899999999998
Q ss_pred C-CceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhH-HHHHHh--hccCC--CCC
Q 015755 96 D-VHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFL-LKRYVL--TGIHD--GPH 169 (401)
Q Consensus 96 ~-~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~--~~~ 169 (401)
+ .++++||||||||+++..++.++|++|+++|++++.....++.....+.. ..+... ...... ..... ...
T Consensus 84 ~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (273)
T PLN02211 84 PENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKD---GVPDLSEFGDVYELGFGLGPDQPPT 160 (273)
T ss_pred CCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhc---cccchhhhccceeeeeccCCCCCCc
Confidence 5 57999999999999999999999999999999987643222111000000 000000 000000 00000 000
Q ss_pred CC-chhhhHHHHHHhhhhcCHHHHH--HHhhh------hccccc-cccccc-CCcEEEEEeCCCCCCCcHHHHHHHHHHc
Q 015755 170 EP-FIADSVDFVVCQVETLSREDLA--SRLTL------TADAAS-VGNLLL-SDSHITIMDTNDYCATSQQLKDQLSERY 238 (401)
Q Consensus 170 ~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~-~~~~~i-~~Pvlli~G~~D~~~~~~~~~~~~~~~~ 238 (401)
.. ........+.. ......... ..+.. ...... ...... .+|+++|.|++| ..+|++.++.+.+.+
T Consensus 161 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D-~~ip~~~~~~m~~~~ 237 (273)
T PLN02211 161 SAIIKKEFRRKILY--QMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHD-HVVKPEQQEAMIKRW 237 (273)
T ss_pred eeeeCHHHHHHHHh--cCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCC-CCCCHHHHHHHHHhC
Confidence 00 00010111100 001110000 00000 000000 001123 679999999999 789999999999999
Q ss_pred CCCeEEEecCCCCCCCcCChHHHHHHHHHHHhhc
Q 015755 239 SGARQAYMKTGGEFPFLSRPDEVNLHLQLHLRRV 272 (401)
Q Consensus 239 ~~~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~~~ 272 (401)
++++++.++ +||.+++++|+++++.|.++....
T Consensus 238 ~~~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 238 PPSQVYELE-SDHSPFFSTPFLLFGLLIKAAASV 270 (273)
T ss_pred CccEEEEEC-CCCCccccCHHHHHHHHHHHHHHh
Confidence 999999996 899999999999999999987654
No 22
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.95 E-value=5e-27 Score=211.22 Aligned_cols=223 Identities=16% Similarity=0.178 Sum_probs=139.9
Q ss_pred CCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC--------ChHHHHHHHHHHHHHhCCceEEEEEEchhHHH
Q 015755 40 VPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW--------NHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFL 111 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~--------s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~i 111 (401)
+|+|||+||++++...|..+++.|. +|+|+++|+|||| +++++++++.+++++++.++++++||||||.+
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~v 79 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP--DYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQSYNILPYWLVGYSLGGRI 79 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC--CCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHHcCCCCeEEEEECHHHHH
Confidence 5789999999999999999999883 6999999999997 67899999999999999999999999999999
Q ss_pred HHHHHHhCCcc-cceEEEecCCCCChhHhhc-CCcccccccch---hhHHHHHHhhccCCCCCCCchhhhHHHHHHhhhh
Q 015755 112 AQLFAQHRPRR-VRSLVLSNTFLDTHSFAAA-MPWAPIVSWTP---SFLLKRYVLTGIHDGPHEPFIADSVDFVVCQVET 186 (401)
Q Consensus 112 a~~~A~~~P~~-V~~lvli~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (401)
|+.+|.++|+. |+++|++++.+........ ..+.....+.. ...........+...............+......
T Consensus 80 a~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (242)
T PRK11126 80 AMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAEQRQQLVAKRSN 159 (242)
T ss_pred HHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCccHHHHHHHhccc
Confidence 99999999764 9999999876432211100 00000000000 0000000000000000000001011111111111
Q ss_pred cCHHHHHHHhhhh---ccc-ccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEEEecCCCCCCCcCChHHHH
Q 015755 187 LSREDLASRLTLT---ADA-ASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFLSRPDEVN 262 (401)
Q Consensus 187 ~~~~~~~~~~~~~---~~~-~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~v~ 262 (401)
.........+... ... .......+++|+++|+|++|. .+. .+.+. .++++++++++||++++|+|++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~-~~~-----~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~ 232 (242)
T PRK11126 160 NNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDS-KFQ-----ALAQQ-LALPLHVIPNAGHNAHRENPAAFA 232 (242)
T ss_pred CCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcc-hHH-----HHHHH-hcCeEEEeCCCCCchhhhChHHHH
Confidence 1111111111100 000 011123578999999999994 332 22333 378999999999999999999999
Q ss_pred HHHHHHHhh
Q 015755 263 LHLQLHLRR 271 (401)
Q Consensus 263 ~~i~~fl~~ 271 (401)
+.|.+|++.
T Consensus 233 ~~i~~fl~~ 241 (242)
T PRK11126 233 ASLAQILRL 241 (242)
T ss_pred HHHHHHHhh
Confidence 999999974
No 23
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.95 E-value=5.7e-26 Score=208.65 Aligned_cols=246 Identities=15% Similarity=0.189 Sum_probs=155.4
Q ss_pred EEEeeCCeeEEEEEcCCC-CCCcEEEeCCCCCChHHHHHHH-HHHhhCCcEEEEecCCCCC------------ChHHHHH
Q 015755 21 HKIPIGTKQWRYYDFGPK-VVPPLICLPGTAGTAEVYYKQI-MALSMKGYRVISVDIPRVW------------NHHEWIQ 86 (401)
Q Consensus 21 ~~~~~~~~~l~y~~~G~~-~~p~vvllHG~~~~~~~~~~~~-~~L~~~g~~Vi~~D~pG~~------------s~~~~a~ 86 (401)
..+++++.++.|...+.. .+++|||+||++++...|...+ ..+.+.||+|+++|+|||| +++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~ 84 (288)
T TIGR01250 5 GIITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVD 84 (288)
T ss_pred ceecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHH
Confidence 357788888889888754 3689999999877665554444 4555448999999999974 3578899
Q ss_pred HHHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCC
Q 015755 87 AFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHD 166 (401)
Q Consensus 87 dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (401)
++..++++++.++++++||||||.+++.+|.++|++|.++|++++......+...... ....................
T Consensus 85 ~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 162 (288)
T TIGR01250 85 ELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNR--LRKELPPEVRAAIKRCEASG 162 (288)
T ss_pred HHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHH--HHhhcChhHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999986543322111000 00000000000000000000
Q ss_pred CCCCCchhhhHHHHHHh---hhhcCHHHHHHH-----------hh------h----hcccccccccccCCcEEEEEeCCC
Q 015755 167 GPHEPFIADSVDFVVCQ---VETLSREDLASR-----------LT------L----TADAASVGNLLLSDSHITIMDTND 222 (401)
Q Consensus 167 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-----------~~------~----~~~~~~~~~~~i~~Pvlli~G~~D 222 (401)
.............+... ............ +. . ...........+++|+++++|++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 242 (288)
T TIGR01250 163 DYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFD 242 (288)
T ss_pred CcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCC
Confidence 00000000000000000 000000000000 00 0 000000112347899999999999
Q ss_pred CCCCcHHHHHHHHHHcCCCeEEEecCCCCCCCcCChHHHHHHHHHHHh
Q 015755 223 YCATSQQLKDQLSERYSGARQAYMKTGGEFPFLSRPDEVNLHLQLHLR 270 (401)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~ 270 (401)
.+ ++...+.+.+.++++++++++++||++++++|+++++.|.+||+
T Consensus 243 -~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 243 -TM-TPEAAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred -cc-CHHHHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 45 55778888888999999999999999999999999999999984
No 24
>PRK10749 lysophospholipase L2; Provisional
Probab=99.95 E-value=2.9e-26 Score=215.62 Aligned_cols=248 Identities=11% Similarity=0.102 Sum_probs=160.4
Q ss_pred ceEEEeeCCeeEEEEEcCC-CCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCCC---------------hH
Q 015755 19 PLHKIPIGTKQWRYYDFGP-KVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWN---------------HH 82 (401)
Q Consensus 19 ~~~~~~~~~~~l~y~~~G~-~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~s---------------~~ 82 (401)
+..++..+|.+++|..+++ ..+++||++||++.+...|..++..|.++||+|+++|+||||. ++
T Consensus 32 ~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~ 111 (330)
T PRK10749 32 EAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFN 111 (330)
T ss_pred ceEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHH
Confidence 3455667899999999886 3467999999999999899999988887899999999999962 46
Q ss_pred HHHHHHHHHHHHh----CCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHH
Q 015755 83 EWIQAFEKFLDAI----DVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKR 158 (401)
Q Consensus 83 ~~a~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (401)
++++|+..+++.+ +..+++++||||||.+++.+|.++|+.|+++|+++|........ .. .............
T Consensus 112 ~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~---~~-~~~~~~~~~~~~~ 187 (330)
T PRK10749 112 DYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPL---PS-WMARRILNWAEGH 187 (330)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCC---Cc-HHHHHHHHHHHHh
Confidence 7889999999876 66799999999999999999999999999999999864321000 00 0000000000000
Q ss_pred H-Hhhc-------cCC-CCCCCc---hhhhHHHHHHhhhhc--------CHHHHHHHhhhhcccccccccccCCcEEEEE
Q 015755 159 Y-VLTG-------IHD-GPHEPF---IADSVDFVVCQVETL--------SREDLASRLTLTADAASVGNLLLSDSHITIM 218 (401)
Q Consensus 159 ~-~~~~-------~~~-~~~~~~---~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~ 218 (401)
. .... ... ...... ............... ........+.. ..........+++|+|+|+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~P~Lii~ 266 (330)
T PRK10749 188 PRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILA-GEQVLAGAGDITTPLLLLQ 266 (330)
T ss_pred cCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHH-HHHHHhhccCCCCCEEEEE
Confidence 0 0000 000 000000 000111111111100 00001111000 0000112234678999999
Q ss_pred eCCCCCCCcHHHHHHHHHHc-------CCCeEEEecCCCCCCCcCCh---HHHHHHHHHHHhhc
Q 015755 219 DTNDYCATSQQLKDQLSERY-------SGARQAYMKTGGEFPFLSRP---DEVNLHLQLHLRRV 272 (401)
Q Consensus 219 G~~D~~~~~~~~~~~~~~~~-------~~~~~~~i~~~GH~~~~e~p---~~v~~~i~~fl~~~ 272 (401)
|++| .+++.+..+.+.+.+ +++++++++++||.++.|.+ +++.+.|.+||++.
T Consensus 267 G~~D-~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 267 AEEE-RVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred eCCC-eeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 9999 688888888887765 34689999999999999876 67888899999764
No 25
>PRK07581 hypothetical protein; Validated
Probab=99.95 E-value=1.1e-26 Score=219.73 Aligned_cols=249 Identities=11% Similarity=0.041 Sum_probs=155.4
Q ss_pred EeeCCeeEEEEEcCCC---CCCcEEEeCCCCCChHHHHHHH---HHHhhCCcEEEEecCCCCCChH------------H-
Q 015755 23 IPIGTKQWRYYDFGPK---VVPPLICLPGTAGTAEVYYKQI---MALSMKGYRVISVDIPRVWNHH------------E- 83 (401)
Q Consensus 23 ~~~~~~~l~y~~~G~~---~~p~vvllHG~~~~~~~~~~~~---~~L~~~g~~Vi~~D~pG~~s~~------------~- 83 (401)
.++++.+++|...|+. ..|+||++||++++...|..++ ..|..++|+||++|+||||..+ +
T Consensus 21 ~~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 100 (339)
T PRK07581 21 ATLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARF 100 (339)
T ss_pred CCcCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCC
Confidence 4567889999999963 3356777777777766665443 3565468999999999997331 1
Q ss_pred ----HHHHHHH----HHHHhCCce-EEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhc------------C
Q 015755 84 ----WIQAFEK----FLDAIDVHH-IHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAA------------M 142 (401)
Q Consensus 84 ----~a~dl~~----~l~~l~~~~-v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~------------~ 142 (401)
+++|+.. +++++++++ ++||||||||++|+.+|.+||++|++||++++.......... .
T Consensus 101 ~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~ 180 (339)
T PRK07581 101 PHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADP 180 (339)
T ss_pred CceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCC
Confidence 4677765 778899999 479999999999999999999999999999876543221100 0
Q ss_pred Cccc-ccccchhhHHH----HHH----hhc-cCCCCCCCc----hhhhHH-HHHHhhhhcCHHHHHHHhhhh------cc
Q 015755 143 PWAP-IVSWTPSFLLK----RYV----LTG-IHDGPHEPF----IADSVD-FVVCQVETLSREDLASRLTLT------AD 201 (401)
Q Consensus 143 ~~~~-~~~~~~~~~~~----~~~----~~~-~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~------~~ 201 (401)
.|.. .....+..... ... ... +........ ...... .+...............+... ..
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 260 (339)
T PRK07581 181 AFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRN 260 (339)
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccC
Confidence 0100 00000000000 000 000 000000000 001111 111111111111111111100 00
Q ss_pred -----cccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEEEecC-CCCCCCcCChHHHHHHHHHHHhhc
Q 015755 202 -----AASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKT-GGEFPFLSRPDEVNLHLQLHLRRV 272 (401)
Q Consensus 202 -----~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~-~GH~~~~e~p~~v~~~i~~fl~~~ 272 (401)
........+++|+|+|+|++| .++++...+.+++.+|+++++++++ +||++++++|++++..|.+||++.
T Consensus 261 ~~~~~d~~~~L~~I~~PtLvI~G~~D-~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 261 PAYGGDLAAALGSITAKTFVMPISTD-LYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFIDAALKEL 336 (339)
T ss_pred cccCCCHHHHHhcCCCCEEEEEeCCC-CCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHH
Confidence 001112347899999999999 6899999999999999999999998 999999999999999999999875
No 26
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.95 E-value=2.3e-26 Score=206.00 Aligned_cols=220 Identities=18% Similarity=0.131 Sum_probs=139.9
Q ss_pred CcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCCC--------hHHHHHHHHHHHHHhCCceEEEEEEchhHHHH
Q 015755 41 PPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWN--------HHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLA 112 (401)
Q Consensus 41 p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~s--------~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia 112 (401)
|+|||+||++++...|..++..|. ++|+|+++|+||||. ++++++++.+.+ .++++++||||||.++
T Consensus 5 ~~iv~~HG~~~~~~~~~~~~~~l~-~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~----~~~~~lvG~S~Gg~~a 79 (245)
T TIGR01738 5 VHLVLIHGWGMNAEVFRCLDEELS-AHFTLHLVDLPGHGRSRGFGPLSLADAAEAIAAQA----PDPAIWLGWSLGGLVA 79 (245)
T ss_pred ceEEEEcCCCCchhhHHHHHHhhc-cCeEEEEecCCcCccCCCCCCcCHHHHHHHHHHhC----CCCeEEEEEcHHHHHH
Confidence 799999999999999999999998 579999999999973 445555544332 3689999999999999
Q ss_pred HHHHHhCCcccceEEEecCCCCChhHhhcC-Cccc--cccc---ch---hhHHHHHHhhccCCCCCCCchhhhHHHHHHh
Q 015755 113 QLFAQHRPRRVRSLVLSNTFLDTHSFAAAM-PWAP--IVSW---TP---SFLLKRYVLTGIHDGPHEPFIADSVDFVVCQ 183 (401)
Q Consensus 113 ~~~A~~~P~~V~~lvli~~~~~~~~~~~~~-~~~~--~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (401)
+.+|.++|++|.++|++++.+......... .+.. ...+ .. ......+....... ..........+...
T Consensus 80 ~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 156 (245)
T TIGR01738 80 LHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLG---TPTARQDARALKQT 156 (245)
T ss_pred HHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc---CCccchHHHHHHHH
Confidence 999999999999999998865321100000 0000 0000 00 00000000000000 00000011111111
Q ss_pred hh---hcCHHHHHHHhhhhcc-cccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEEEecCCCCCCCcCChH
Q 015755 184 VE---TLSREDLASRLTLTAD-AASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFLSRPD 259 (401)
Q Consensus 184 ~~---~~~~~~~~~~~~~~~~-~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~ 259 (401)
.. ......+...+..... ........+++|+++|+|++| .+++.+..+.+.+.++++++++++++||++++|+|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D-~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~ 235 (245)
T TIGR01738 157 LLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLD-GLVPAKVVPYLDKLAPHSELYIFAKAAHAPFLSHAE 235 (245)
T ss_pred hhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCC-cccCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHH
Confidence 10 0001111111111000 001112357899999999999 688999899999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 015755 260 EVNLHLQLHL 269 (401)
Q Consensus 260 ~v~~~i~~fl 269 (401)
++++.|.+|+
T Consensus 236 ~~~~~i~~fi 245 (245)
T TIGR01738 236 AFCALLVAFK 245 (245)
T ss_pred HHHHHHHhhC
Confidence 9999999985
No 27
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.95 E-value=1.7e-26 Score=220.96 Aligned_cols=251 Identities=16% Similarity=0.187 Sum_probs=162.1
Q ss_pred EEeeCCeeEEEEEcCCC---CCCcEEEeCCCCCChHH-------------HHHHHH---HHhhCCcEEEEecCCCC----
Q 015755 22 KIPIGTKQWRYYDFGPK---VVPPLICLPGTAGTAEV-------------YYKQIM---ALSMKGYRVISVDIPRV---- 78 (401)
Q Consensus 22 ~~~~~~~~l~y~~~G~~---~~p~vvllHG~~~~~~~-------------~~~~~~---~L~~~g~~Vi~~D~pG~---- 78 (401)
-.++++.+++|..+|+. ++|+|||+||++++... |..++. .|..++|+||++|+||+
T Consensus 27 g~~~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s 106 (379)
T PRK00175 27 GAVLPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGS 106 (379)
T ss_pred CCCcCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCC
Confidence 35668889999999963 36899999999999985 555542 34336899999999982
Q ss_pred --------------------CChHHHHHHHHHHHHHhCCce-EEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChh
Q 015755 79 --------------------WNHHEWIQAFEKFLDAIDVHH-IHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHS 137 (401)
Q Consensus 79 --------------------~s~~~~a~dl~~~l~~l~~~~-v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~ 137 (401)
++++++++++..+++++++++ ++++||||||++++.+|.++|++|+++|++++......
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 186 (379)
T PRK00175 107 TGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSA 186 (379)
T ss_pred CCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCH
Confidence 246799999999999999999 58999999999999999999999999999998764322
Q ss_pred H----hh-----cC---Cccc--cc--ccch--hhHHHH-----------HHhhccCCCCCCCc------hhhhHHHHH-
Q 015755 138 F----AA-----AM---PWAP--IV--SWTP--SFLLKR-----------YVLTGIHDGPHEPF------IADSVDFVV- 181 (401)
Q Consensus 138 ~----~~-----~~---~~~~--~~--~~~~--~~~~~~-----------~~~~~~~~~~~~~~------~~~~~~~~~- 181 (401)
. .. .. .|.. .. ...+ .....+ .+...+........ .......+.
T Consensus 187 ~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~ 266 (379)
T PRK00175 187 QNIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLR 266 (379)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHH
Confidence 1 00 00 0000 00 0000 000000 00011111000000 000011110
Q ss_pred ----HhhhhcCHHHHHHHhhh--hcc-------cccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCC----eEE
Q 015755 182 ----CQVETLSREDLASRLTL--TAD-------AASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGA----RQA 244 (401)
Q Consensus 182 ----~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~----~~~ 244 (401)
..........+...... ..+ ........+++|+|+|+|++| .+++++..+.+++.++++ +++
T Consensus 267 ~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D-~~~p~~~~~~la~~i~~a~~~~~l~ 345 (379)
T PRK00175 267 YQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSD-WLFPPARSREIVDALLAAGADVSYA 345 (379)
T ss_pred HHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCc-cccCHHHHHHHHHHHHhcCCCeEEE
Confidence 01111111111111100 000 001112357899999999999 689999999999999887 777
Q ss_pred Eec-CCCCCCCcCChHHHHHHHHHHHhhcc
Q 015755 245 YMK-TGGEFPFLSRPDEVNLHLQLHLRRVG 273 (401)
Q Consensus 245 ~i~-~~GH~~~~e~p~~v~~~i~~fl~~~~ 273 (401)
+++ ++||++++|+|+++++.|.+||+++.
T Consensus 346 ~i~~~~GH~~~le~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 346 EIDSPYGHDAFLLDDPRYGRLVRAFLERAA 375 (379)
T ss_pred EeCCCCCchhHhcCHHHHHHHHHHHHHhhh
Confidence 775 89999999999999999999999864
No 28
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.95 E-value=1e-26 Score=220.64 Aligned_cols=247 Identities=17% Similarity=0.212 Sum_probs=159.1
Q ss_pred EeeCCeeEEEEEcCC---CCCCcEEEeCCCCCChHH-----------HHHHH---HHHhhCCcEEEEecCCC--CC----
Q 015755 23 IPIGTKQWRYYDFGP---KVVPPLICLPGTAGTAEV-----------YYKQI---MALSMKGYRVISVDIPR--VW---- 79 (401)
Q Consensus 23 ~~~~~~~l~y~~~G~---~~~p~vvllHG~~~~~~~-----------~~~~~---~~L~~~g~~Vi~~D~pG--~~---- 79 (401)
..+++.+++|..+|+ ..+++|||+||++++... |..++ ..|..++|+|+++|+|| |+
T Consensus 11 ~~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~ 90 (351)
T TIGR01392 11 GVLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGP 90 (351)
T ss_pred CccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCC
Confidence 456889999999996 346799999999998743 66665 25545789999999999 32
Q ss_pred -----------------ChHHHHHHHHHHHHHhCCce-EEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhc
Q 015755 80 -----------------NHHEWIQAFEKFLDAIDVHH-IHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAA 141 (401)
Q Consensus 80 -----------------s~~~~a~dl~~~l~~l~~~~-v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~ 141 (401)
+++++++++..+++++++++ ++++||||||++++.+|.++|++|+++|++++......+...
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (351)
T TIGR01392 91 SSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIA 170 (351)
T ss_pred CCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHH
Confidence 35789999999999999999 999999999999999999999999999999987654321100
Q ss_pred ------------CCccc--cccc-chh--hH-HHH----------HHhhccCCCCCCC-----------chhhhHHHHH-
Q 015755 142 ------------MPWAP--IVSW-TPS--FL-LKR----------YVLTGIHDGPHEP-----------FIADSVDFVV- 181 (401)
Q Consensus 142 ------------~~~~~--~~~~-~~~--~~-~~~----------~~~~~~~~~~~~~-----------~~~~~~~~~~- 181 (401)
..+.. .... .+. .. ... .+...+....... ..........
T Consensus 171 ~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
T TIGR01392 171 FNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGD 250 (351)
T ss_pred HHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHH
Confidence 00000 0000 000 00 000 0000011000000 0000110000
Q ss_pred HhhhhcCHHHHH---HHhhhh-cc----cccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEE-----EecC
Q 015755 182 CQVETLSREDLA---SRLTLT-AD----AASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQA-----YMKT 248 (401)
Q Consensus 182 ~~~~~~~~~~~~---~~~~~~-~~----~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~-----~i~~ 248 (401)
..........+. ..+... .. ........+++|+|+|+|++| .++|+...+.+++.+|+++++ ++++
T Consensus 251 ~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D-~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~ 329 (351)
T TIGR01392 251 KFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSD-WLFPPAESRELAKALPAAGLRVTYVEIESP 329 (351)
T ss_pred HHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCc-cccCHHHHHHHHHHHhhcCCceEEEEeCCC
Confidence 001111111110 111100 00 001122347899999999999 789999999999999988765 5678
Q ss_pred CCCCCCcCChHHHHHHHHHHHh
Q 015755 249 GGEFPFLSRPDEVNLHLQLHLR 270 (401)
Q Consensus 249 ~GH~~~~e~p~~v~~~i~~fl~ 270 (401)
+||++++++|++|++.|.+||+
T Consensus 330 ~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 330 YGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred CCcchhhcCHHHHHHHHHHHhC
Confidence 9999999999999999999984
No 29
>PHA02857 monoglyceride lipase; Provisional
Probab=99.95 E-value=1.1e-25 Score=206.70 Aligned_cols=244 Identities=10% Similarity=0.058 Sum_probs=153.6
Q ss_pred EEEeeCCeeEEEEEcCCC--CCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCCC----------hHHHHHHH
Q 015755 21 HKIPIGTKQWRYYDFGPK--VVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWN----------HHEWIQAF 88 (401)
Q Consensus 21 ~~~~~~~~~l~y~~~G~~--~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~s----------~~~~a~dl 88 (401)
.++..+|.+++|+.+-+. ..+.|+++||++.+...|..++..|.++||+|+++|+||||. +.++++|+
T Consensus 4 ~~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~ 83 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDV 83 (276)
T ss_pred eeecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHH
Confidence 345668999999887663 234577779999999999999999987899999999999973 23445555
Q ss_pred HHHHHHh----CCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhcc
Q 015755 89 EKFLDAI----DVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGI 164 (401)
Q Consensus 89 ~~~l~~l----~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (401)
...++.+ ...+++++||||||.+|+.+|.++|++|+++|+++|........ ..................
T Consensus 84 ~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 156 (276)
T PHA02857 84 VQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVP-------RLNLLAAKLMGIFYPNKI 156 (276)
T ss_pred HHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccccccc-------HHHHHHHHHHHHhCCCCc
Confidence 5555443 34589999999999999999999999999999999865421100 000000000000000000
Q ss_pred CCCCC----CCchhhhHHHHHHhhhhc--CHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHc
Q 015755 165 HDGPH----EPFIADSVDFVVCQVETL--SREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERY 238 (401)
Q Consensus 165 ~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~ 238 (401)
..... .................. ....+.................+++|+++|+|++| .++|.+..+.+.+.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D-~i~~~~~~~~l~~~~ 235 (276)
T PHA02857 157 VGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNN-EISDVSGAYYFMQHA 235 (276)
T ss_pred cCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCC-CcCChHHHHHHHHHc
Confidence 00000 000000000000000000 00000000000000011122357899999999999 689999999998876
Q ss_pred -CCCeEEEecCCCCCCCcCCh---HHHHHHHHHHHhhc
Q 015755 239 -SGARQAYMKTGGEFPFLSRP---DEVNLHLQLHLRRV 272 (401)
Q Consensus 239 -~~~~~~~i~~~GH~~~~e~p---~~v~~~i~~fl~~~ 272 (401)
+++++.+++++||.++.|++ +++.+.+.+||...
T Consensus 236 ~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 236 NCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred cCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 46899999999999999876 57889999999874
No 30
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.94 E-value=8.2e-26 Score=201.76 Aligned_cols=230 Identities=17% Similarity=0.226 Sum_probs=148.5
Q ss_pred CCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCCC-------------hHHHHHHHHHHHHHhCCceEEEEE
Q 015755 38 KVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWN-------------HHEWIQAFEKFLDAIDVHHIHLYG 104 (401)
Q Consensus 38 ~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~s-------------~~~~a~dl~~~l~~l~~~~v~lvG 104 (401)
.+++++||+||+|++...|...++.|++ .++|+++|+||+|. .+.+++.++++....++.+.+|+|
T Consensus 88 ~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvG 166 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVG 166 (365)
T ss_pred cCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEee
Confidence 4678999999999999999999999995 89999999999973 357899999999999999999999
Q ss_pred EchhHHHHHHHHHhCCcccceEEEecCCCCChhH-hhcCCccccccc-----------chhhHHH-----------HHHh
Q 015755 105 TSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSF-AAAMPWAPIVSW-----------TPSFLLK-----------RYVL 161 (401)
Q Consensus 105 hS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~-~~~~~~~~~~~~-----------~~~~~~~-----------~~~~ 161 (401)
||+||++|..||.+||++|+.|||++|....... .....+.....| .+...++ ++..
T Consensus 167 HSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~ 246 (365)
T KOG4409|consen 167 HSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRP 246 (365)
T ss_pred ccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhH
Confidence 9999999999999999999999999997543321 111111111111 1111111 0000
Q ss_pred hccCCCCCCCchhhh-HHHHHHhh-hhcCHHHHHHHhhhhccc------ccccccccCCcEEEEEeCCCCCCCcHHHHHH
Q 015755 162 TGIHDGPHEPFIADS-VDFVVCQV-ETLSREDLASRLTLTADA------ASVGNLLLSDSHITIMDTNDYCATSQQLKDQ 233 (401)
Q Consensus 162 ~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~ 233 (401)
..+.. .......+. .+++.... .+.+.+.....+...... ..+....-.||+++|+|++| . +.......
T Consensus 247 d~~~k-~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~d-W-mD~~~g~~ 323 (365)
T KOG4409|consen 247 DRFRK-FPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRD-W-MDKNAGLE 323 (365)
T ss_pred HHHHh-ccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCcc-c-ccchhHHH
Confidence 00000 000001111 12221111 111122222211111110 11122233599999999999 3 44444455
Q ss_pred HHHHc--CCCeEEEecCCCCCCCcCChHHHHHHHHHHHhh
Q 015755 234 LSERY--SGARQAYMKTGGEFPFLSRPDEVNLHLQLHLRR 271 (401)
Q Consensus 234 ~~~~~--~~~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~~ 271 (401)
+.+.+ ..++.++++++||.+++++|+.|++.+.++++.
T Consensus 324 ~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 324 VTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDK 363 (365)
T ss_pred HHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhc
Confidence 55532 358999999999999999999999999999875
No 31
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.94 E-value=1.4e-25 Score=194.63 Aligned_cols=261 Identities=14% Similarity=0.130 Sum_probs=190.7
Q ss_pred CceEEEeeCCeeEEEEEcCCCC--CCcEEEeCCCCCChHH-HHHH-----HHHHhhCCcEEEEecCCCC-----------
Q 015755 18 VPLHKIPIGTKQWRYYDFGPKV--VPPLICLPGTAGTAEV-YYKQ-----IMALSMKGYRVISVDIPRV----------- 78 (401)
Q Consensus 18 ~~~~~~~~~~~~l~y~~~G~~~--~p~vvllHG~~~~~~~-~~~~-----~~~L~~~g~~Vi~~D~pG~----------- 78 (401)
...+.|++..+.+++..+|+++ +|++|..|+++.++.. |..+ +..+.. +|.++++|.||+
T Consensus 22 ~~e~~V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~-~fcv~HV~~PGqe~gAp~~p~~y 100 (326)
T KOG2931|consen 22 CQEHDVETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILE-HFCVYHVDAPGQEDGAPSFPEGY 100 (326)
T ss_pred ceeeeeccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHh-heEEEecCCCccccCCccCCCCC
Confidence 5678899999999999999876 8899999999999987 4433 345553 599999999996
Q ss_pred --CChHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhc--CCcc-------cc
Q 015755 79 --WNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAA--MPWA-------PI 147 (401)
Q Consensus 79 --~s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~--~~~~-------~~ 147 (401)
.++++++++|..++++++++.|+.+|...||+|..++|.+||++|.|||||++.+..++|... .++. ..
T Consensus 101 ~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~~~Gm 180 (326)
T KOG2931|consen 101 PYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWAYNKVSSNLLYYYGM 180 (326)
T ss_pred CCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHHHHHHHHHHHHhhch
Confidence 489999999999999999999999999999999999999999999999999999888887433 2222 33
Q ss_pred cccchhhHHHHHHhhccCCCCCCCchhhhHHHHHHhhhhcCHHHHHHHhhh---hccccccc---ccccCCcEEEEEeCC
Q 015755 148 VSWTPSFLLKRYVLTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTL---TADAASVG---NLLLSDSHITIMDTN 221 (401)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---~~~i~~Pvlli~G~~ 221 (401)
.....++++.+.+....... ..+..+...+.+.+. .+...+..++.. ..+...-. ..+++||+|+|.|++
T Consensus 181 t~~~~d~ll~H~Fg~e~~~~-~~diVq~Yr~~l~~~---~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~ 256 (326)
T KOG2931|consen 181 TQGVKDYLLAHHFGKEELGN-NSDIVQEYRQHLGER---LNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDN 256 (326)
T ss_pred hhhHHHHHHHHHhccccccc-cHHHHHHHHHHHHhc---CChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCC
Confidence 34455555555555443332 222333333333222 233334333332 22221111 115779999999999
Q ss_pred CCCCCcHHHHHHHHHHcC-CCeEEEecCCCCCCCcCChHHHHHHHHHHHhhccCCCCcccccccc
Q 015755 222 DYCATSQQLKDQLSERYS-GARQAYMKTGGEFPFLSRPDEVNLHLQLHLRRVGVEARPDLVRGIS 285 (401)
Q Consensus 222 D~~~~~~~~~~~~~~~~~-~~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~~~~~~~~~~~~~~~~ 285 (401)
.+ . -.+..+...+..| ++.++.+.++|-.+..++|.++++.++.|++++++.+...+.+..+
T Consensus 257 Sp-~-~~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~Gy~~s~~~~~~~R 319 (326)
T KOG2931|consen 257 SP-H-VSAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGMGYLPSASMTRLPR 319 (326)
T ss_pred Cc-h-hhhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccCCcccccccccCcc
Confidence 94 3 2344444444445 5899999999999999999999999999999999988776654433
No 32
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.94 E-value=2.1e-26 Score=203.47 Aligned_cols=212 Identities=25% Similarity=0.322 Sum_probs=142.6
Q ss_pred EEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC-----------ChHHHHHHHHHHHHHhCCceEEEEEEchhHHH
Q 015755 43 LICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW-----------NHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFL 111 (401)
Q Consensus 43 vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~-----------s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~i 111 (401)
|||+||++++...|..+++.|. +||+|+++|+||+| +++++++++.+++++++.++++++|||+||.+
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMI 79 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccc
Confidence 7999999999999999999996 79999999999985 45789999999999999999999999999999
Q ss_pred HHHHHHhCCcccceEEEecCCCCChhHhh-cCCcccccccchhh--HHHHHHhhccCCCCCCCchhhhHHHHHHhhhhcC
Q 015755 112 AQLFAQHRPRRVRSLVLSNTFLDTHSFAA-AMPWAPIVSWTPSF--LLKRYVLTGIHDGPHEPFIADSVDFVVCQVETLS 188 (401)
Q Consensus 112 a~~~A~~~P~~V~~lvli~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (401)
++.++.++|++|+++|++++......... .............. .........+.. ............. .
T Consensus 80 a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~----~ 151 (228)
T PF12697_consen 80 ALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYR----WFDGDEPEDLIRS----S 151 (228)
T ss_dssp HHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHTHHHHHHHHHH----H
T ss_pred ccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccccccc----ccccccccccccc----c
Confidence 99999999999999999999775432210 00000000000000 000000000000 0000000011000 1
Q ss_pred HHHHHHHhhh--hcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEEEecCCCCCCCcCChHHHHHH
Q 015755 189 REDLASRLTL--TADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFLSRPDEVNLH 264 (401)
Q Consensus 189 ~~~~~~~~~~--~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~v~~~ 264 (401)
...+...+.. ...........+++|+++|+|++| .+++.+..+.+.+.++++++++++++||++++++|++|+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D-~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 152 RRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDD-PIVPPESAEELADKLPNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTS-SSSHHHHHHHHHHHSTTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred ccccccccccccccccccccccccCCCeEEeecCCC-CCCCHHHHHHHHHHCCCCEEEEECCCCCccHHHCHHHHhcC
Confidence 1111111110 001111122335889999999999 68899999999999999999999999999999999999874
No 33
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=1.7e-25 Score=210.82 Aligned_cols=244 Identities=15% Similarity=0.151 Sum_probs=152.4
Q ss_pred EeeCCeeEEEEEcCCC----CCCcEEEeCCCCCChH-HHHHHHHHHhhCCcEEEEecCCCCC----------ChHHHHHH
Q 015755 23 IPIGTKQWRYYDFGPK----VVPPLICLPGTAGTAE-VYYKQIMALSMKGYRVISVDIPRVW----------NHHEWIQA 87 (401)
Q Consensus 23 ~~~~~~~l~y~~~G~~----~~p~vvllHG~~~~~~-~~~~~~~~L~~~g~~Vi~~D~pG~~----------s~~~~a~d 87 (401)
...+|.+++|+.+++. .+++|||+||++.+.. .|..+...|.++||+|+++|+|||| +++.+++|
T Consensus 38 ~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D 117 (330)
T PLN02298 38 TSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVED 117 (330)
T ss_pred EcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHH
Confidence 3348899999887653 2446999999987653 4566677888789999999999996 35678999
Q ss_pred HHHHHHHhCC------ceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHh
Q 015755 88 FEKFLDAIDV------HHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVL 161 (401)
Q Consensus 88 l~~~l~~l~~------~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (401)
+..+++.+.. .+++|+||||||.+++.++.++|++|+++|++++......... ..+. . .... ........
T Consensus 118 ~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~-~-~~~~-~~~~~~~~ 193 (330)
T PLN02298 118 CLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIR-PPWP-I-PQIL-TFVARFLP 193 (330)
T ss_pred HHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccC-CchH-H-HHHH-HHHHHHCC
Confidence 9999988753 3699999999999999999999999999999998653221000 0000 0 0000 00001000
Q ss_pred hccCCCC---CCCchh-hhHHHHHHhh-hhc----CHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHH
Q 015755 162 TGIHDGP---HEPFIA-DSVDFVVCQV-ETL----SREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKD 232 (401)
Q Consensus 162 ~~~~~~~---~~~~~~-~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~ 232 (401)
....... ...... .....+.... ... ....+...+.. ..........+.+|+|+|+|++| .+++.+..+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~PvLii~G~~D-~ivp~~~~~ 271 (330)
T PLN02298 194 TLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRV-TDYLGKKLKDVSIPFIVLHGSAD-VVTDPDVSR 271 (330)
T ss_pred CCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHH-HHHHHHhhhhcCCCEEEEecCCC-CCCCHHHHH
Confidence 0000000 000000 0000000000 000 00000010100 00001112346799999999999 689999999
Q ss_pred HHHHHcC--CCeEEEecCCCCCCCcCChHH----HHHHHHHHHhhc
Q 015755 233 QLSERYS--GARQAYMKTGGEFPFLSRPDE----VNLHLQLHLRRV 272 (401)
Q Consensus 233 ~~~~~~~--~~~~~~i~~~GH~~~~e~p~~----v~~~i~~fl~~~ 272 (401)
.+.+.++ ++++++++++||.++.++|+. +.+.|.+||.+.
T Consensus 272 ~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~ 317 (330)
T PLN02298 272 ALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNER 317 (330)
T ss_pred HHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHh
Confidence 8887764 789999999999999988864 667788898875
No 34
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.94 E-value=6.7e-26 Score=210.25 Aligned_cols=253 Identities=21% Similarity=0.255 Sum_probs=160.1
Q ss_pred ceEEEeeCCe--eEEEEEcCCC---------CCCcEEEeCCCCCChHHHHHHHHHHhhC-CcEEEEecCCCCC-------
Q 015755 19 PLHKIPIGTK--QWRYYDFGPK---------VVPPLICLPGTAGTAEVYYKQIMALSMK-GYRVISVDIPRVW------- 79 (401)
Q Consensus 19 ~~~~~~~~~~--~l~y~~~G~~---------~~p~vvllHG~~~~~~~~~~~~~~L~~~-g~~Vi~~D~pG~~------- 79 (401)
....+++..+ .+.....|.. ++|+||++|||+++...|+.++..|..+ |+.|+++|++|+|
T Consensus 26 ~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~ 105 (326)
T KOG1454|consen 26 RSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPR 105 (326)
T ss_pred cceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCC
Confidence 3445555444 5555555544 6899999999999999999999999854 4999999999975
Q ss_pred ----ChHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEE---EecCCCCChhHh--hc---CC----
Q 015755 80 ----NHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLV---LSNTFLDTHSFA--AA---MP---- 143 (401)
Q Consensus 80 ----s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lv---li~~~~~~~~~~--~~---~~---- 143 (401)
+..++++.+..++...+.++++++|||+||.+|+.+|+.+|+.|+++| ++++........ .. ..
T Consensus 106 ~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (326)
T KOG1454|consen 106 GPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLS 185 (326)
T ss_pred CCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhcc
Confidence 467889999999999999999999999999999999999999999999 444433221100 00 00
Q ss_pred ----cccccccchhhHHHHHHhhccCC--CCCCCchhhhHHHHHHhh-hhcCHHHHHHHhhhhc---ccccccccccC-C
Q 015755 144 ----WAPIVSWTPSFLLKRYVLTGIHD--GPHEPFIADSVDFVVCQV-ETLSREDLASRLTLTA---DAASVGNLLLS-D 212 (401)
Q Consensus 144 ----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~i~-~ 212 (401)
+.......+.............. .................. ....+......+.... .........+. |
T Consensus 186 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 265 (326)
T KOG1454|consen 186 ALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKC 265 (326)
T ss_pred HhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCC
Confidence 00000000000000000000000 000000000000000000 0000011011010000 00011112244 9
Q ss_pred cEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEEEecCCCCCCCcCChHHHHHHHHHHHhhc
Q 015755 213 SHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFLSRPDEVNLHLQLHLRRV 272 (401)
Q Consensus 213 Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~~~ 272 (401)
|+++|+|++| .++|.+.++.+.+.+|++++++++++||.+++|.|+++++.|..|+++.
T Consensus 266 pvlii~G~~D-~~~p~~~~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 266 PVLIIWGDKD-QIVPLELAEELKKKLPNAELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred ceEEEEcCcC-CccCHHHHHHHHhhCCCceEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 9999999999 7999999999999999999999999999999999999999999999875
No 35
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.93 E-value=2.5e-24 Score=206.85 Aligned_cols=242 Identities=19% Similarity=0.248 Sum_probs=147.4
Q ss_pred eEEEEEc-CCCCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCCCh--------------HHHHHHHHHHHH
Q 015755 29 QWRYYDF-GPKVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWNH--------------HEWIQAFEKFLD 93 (401)
Q Consensus 29 ~l~y~~~-G~~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~s~--------------~~~a~dl~~~l~ 93 (401)
++++... +.+++|+|||+||++++...|...+..|.+ +|+|+++|+||||.. +.+++++.++++
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~ 171 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQGFFFRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRK 171 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchhHHHHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHH
Confidence 4444433 345679999999999999999999999984 699999999999632 135667788888
Q ss_pred HhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhh----cC----Ccccc-------cccchhh----
Q 015755 94 AIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAA----AM----PWAPI-------VSWTPSF---- 154 (401)
Q Consensus 94 ~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~----~~----~~~~~-------~~~~~~~---- 154 (401)
.++.++++|+||||||++|+.+|.++|++|+++|++++......... .. .|... ....+..
T Consensus 172 ~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 251 (402)
T PLN02894 172 AKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRG 251 (402)
T ss_pred HcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHh
Confidence 88999999999999999999999999999999999998643211100 00 00000 0000000
Q ss_pred -------HHHHHHhhccCCCC-----CCCchhhhHHHHHHhhhhc-CHHHHHHHhhhh----cccccccccccCCcEEEE
Q 015755 155 -------LLKRYVLTGIHDGP-----HEPFIADSVDFVVCQVETL-SREDLASRLTLT----ADAASVGNLLLSDSHITI 217 (401)
Q Consensus 155 -------~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~i~~Pvlli 217 (401)
+........+.... .........+++....... ........+... ..........+++|+++|
T Consensus 252 ~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI 331 (402)
T PLN02894 252 LGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFI 331 (402)
T ss_pred ccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEE
Confidence 00011101000000 0000011111111111000 111101111000 000111123468999999
Q ss_pred EeCCCCCCCcHHHHHHHHHHc-CCCeEEEecCCCCCCCcCChHHHHHHHHHHHhhcc
Q 015755 218 MDTNDYCATSQQLKDQLSERY-SGARQAYMKTGGEFPFLSRPDEVNLHLQLHLRRVG 273 (401)
Q Consensus 218 ~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~~~~ 273 (401)
+|++| .+.+ ...+.+.+.. +.+++++++++||+++.|+|++|++.|.+|++...
T Consensus 332 ~G~~D-~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~ 386 (402)
T PLN02894 332 YGRHD-WMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYL 386 (402)
T ss_pred EeCCC-CCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhc
Confidence 99999 5655 4444455544 45899999999999999999999999999998764
No 36
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.93 E-value=6.7e-25 Score=210.16 Aligned_cols=243 Identities=22% Similarity=0.218 Sum_probs=159.2
Q ss_pred EEEeeCCeeEEEEEcCCCCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC---------ChHHHHHHHHHH
Q 015755 21 HKIPIGTKQWRYYDFGPKVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW---------NHHEWIQAFEKF 91 (401)
Q Consensus 21 ~~~~~~~~~l~y~~~G~~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~---------s~~~~a~dl~~~ 91 (401)
..+.+++..++|...|++++|+|||+||++++...|..+...|. ++|+|+++|+|||| +++++++++..+
T Consensus 112 ~~~~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~ 190 (371)
T PRK14875 112 RKARIGGRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALA-AGRPVIALDLPGHGASSKAVGAGSLDELAAAVLAF 190 (371)
T ss_pred CcceEcCcEEEEecccCCCCCeEEEECCCCCccchHHHHHHHHh-cCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 35677888899999998778999999999999999999999998 46999999999996 467899999999
Q ss_pred HHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCCCCCCC
Q 015755 92 LDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHDGPHEP 171 (401)
Q Consensus 92 l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (401)
++.++..+++++|||+||.+++.+|.++|++|.++|++++........... ...+........+.......+... ..
T Consensus 191 ~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~ 267 (371)
T PRK14875 191 LDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDY-IDGFVAAESRRELKPVLELLFADP--AL 267 (371)
T ss_pred HHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhH-HHHhhcccchhHHHHHHHHHhcCh--hh
Confidence 999999999999999999999999999999999999998764321100000 000000000000000110000000 00
Q ss_pred chhhhHHHHHHhhhhcC-HHHHHHHhhhhcc------cccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEE
Q 015755 172 FIADSVDFVVCQVETLS-REDLASRLTLTAD------AASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQA 244 (401)
Q Consensus 172 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~ 244 (401)
................. ...+......... ........++||+++|+|++| .+++....+.+ .++.++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D-~~vp~~~~~~l---~~~~~~~ 343 (371)
T PRK14875 268 VTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQD-RIIPAAHAQGL---PDGVAVH 343 (371)
T ss_pred CCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCC-CccCHHHHhhc---cCCCeEE
Confidence 00111111111000000 0000000000000 000112246899999999999 67787665433 3468999
Q ss_pred EecCCCCCCCcCChHHHHHHHHHHHhh
Q 015755 245 YMKTGGEFPFLSRPDEVNLHLQLHLRR 271 (401)
Q Consensus 245 ~i~~~GH~~~~e~p~~v~~~i~~fl~~ 271 (401)
+++++||++++++|+++++.|.+|+++
T Consensus 344 ~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 344 VLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred EeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 999999999999999999999999975
No 37
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.93 E-value=1.3e-24 Score=194.82 Aligned_cols=227 Identities=18% Similarity=0.212 Sum_probs=145.6
Q ss_pred CCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC-----------ChHHHHHH-HHHHHHHhCCceEEEEEEch
Q 015755 40 VPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW-----------NHHEWIQA-FEKFLDAIDVHHIHLYGTSL 107 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~-----------s~~~~a~d-l~~~l~~l~~~~v~lvGhS~ 107 (401)
+|+|||+||++++...|..++..|. ++|+|+++|+|||| ++++++++ +..+++.++.++++++|||+
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 79 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSM 79 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 4789999999999999999999998 79999999999986 34567777 77788888888999999999
Q ss_pred hHHHHHHHHHhCCcccceEEEecCCCCChhHhhc-CCccccccc---c----hhhHHHHHHhhccCCCCCCCchhhhHHH
Q 015755 108 GGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAA-MPWAPIVSW---T----PSFLLKRYVLTGIHDGPHEPFIADSVDF 179 (401)
Q Consensus 108 Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~-~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (401)
||.+++.+|.++|+.|.++|++++.+........ ..+.....+ + .......+........ ...........
T Consensus 80 Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 158 (251)
T TIGR03695 80 GGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFAS-QKNLPPEQRQA 158 (251)
T ss_pred HHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeee-cccCChHHhHH
Confidence 9999999999999999999999986543211100 000000000 0 0000000000000000 00000111111
Q ss_pred HHHhhhhcCHHHHHHHhhhhc---ccc-cccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEEEecCCCCCCCc
Q 015755 180 VVCQVETLSREDLASRLTLTA---DAA-SVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFL 255 (401)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~ 255 (401)
+...............+.... ... ......+.+|+++|+|++| ..+ ....+.+.+..++.++++++++||++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D-~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 236 (251)
T TIGR03695 159 LRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKD-EKF-VQIAKEMQKLLPNLTLVIIANAGHNIHL 236 (251)
T ss_pred HHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcc-hHH-HHHHHHHHhcCCCCcEEEEcCCCCCcCc
Confidence 111111111111111111100 000 0112347899999999999 444 3566778888899999999999999999
Q ss_pred CChHHHHHHHHHHHh
Q 015755 256 SRPDEVNLHLQLHLR 270 (401)
Q Consensus 256 e~p~~v~~~i~~fl~ 270 (401)
++|+++++.|.+|++
T Consensus 237 e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 237 ENPEAFAKILLAFLE 251 (251)
T ss_pred cChHHHHHHHHHHhC
Confidence 999999999999984
No 38
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.93 E-value=5.4e-25 Score=194.44 Aligned_cols=247 Identities=14% Similarity=0.178 Sum_probs=160.4
Q ss_pred eEEEeeCCeeEEEEEcCCCC--CCcEEEeCCCCCChHH-HHHHH-----HHHhhCCcEEEEecCCCC-------------
Q 015755 20 LHKIPIGTKQWRYYDFGPKV--VPPLICLPGTAGTAEV-YYKQI-----MALSMKGYRVISVDIPRV------------- 78 (401)
Q Consensus 20 ~~~~~~~~~~l~y~~~G~~~--~p~vvllHG~~~~~~~-~~~~~-----~~L~~~g~~Vi~~D~pG~------------- 78 (401)
++.++++.+.+++..+|+.+ +|+||.+|.+|.++.+ |..++ ..+. ++|.++.+|.||+
T Consensus 1 eh~v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~-~~f~i~Hi~aPGqe~ga~~~p~~y~y 79 (283)
T PF03096_consen 1 EHDVETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEIL-QNFCIYHIDAPGQEEGAATLPEGYQY 79 (283)
T ss_dssp -EEEEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHH-TTSEEEEEE-TTTSTT-----TT---
T ss_pred CceeccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHh-hceEEEEEeCCCCCCCcccccccccc
Confidence 36789999999999999976 9999999999999987 44443 3455 6899999999997
Q ss_pred CChHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCC---------cccccc
Q 015755 79 WNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMP---------WAPIVS 149 (401)
Q Consensus 79 ~s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~---------~~~~~~ 149 (401)
.+++++++++..++++++++.++.+|...||+|.+++|.+||++|.|||||++.+...+|..... ...+..
T Consensus 80 Psmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~ 159 (283)
T PF03096_consen 80 PSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMTS 159 (283)
T ss_dssp --HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-------CTTS
T ss_pred cCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhccccccccccc
Confidence 48999999999999999999999999999999999999999999999999999988887743221 113344
Q ss_pred cchhhHHHHHHhhccCCCCCCCchhhhHHHHHHhhh-hcCHHHHHHHhhhhcccc--cccccccCCcEEEEEeCCCCCCC
Q 015755 150 WTPSFLLKRYVLTGIHDGPHEPFIADSVDFVVCQVE-TLSREDLASRLTLTADAA--SVGNLLLSDSHITIMDTNDYCAT 226 (401)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~i~~Pvlli~G~~D~~~~ 226 (401)
....+++.+.+....... ..+.++.+...+. ..+...+..++....... ........||+|+|.|++.+ .
T Consensus 160 ~~~d~Ll~h~Fg~~~~~~-----n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp-~- 232 (283)
T PF03096_consen 160 SVKDYLLWHYFGKEEEEN-----NSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSP-H- 232 (283)
T ss_dssp -HHHHHHHHHS-HHHHHC-----T-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTST-T-
T ss_pred chHHhhhhcccccccccc-----cHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCc-c-
Confidence 455555555544433222 2223444444443 344455555554333222 22233456999999999994 3
Q ss_pred cHHHHHHHHHHc-C-CCeEEEecCCCCCCCcCChHHHHHHHHHHHhhccCC
Q 015755 227 SQQLKDQLSERY-S-GARQAYMKTGGEFPFLSRPDEVNLHLQLHLRRVGVE 275 (401)
Q Consensus 227 ~~~~~~~~~~~~-~-~~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~~~~~~ 275 (401)
-.+. ..+...+ | +++++.+++||-.+..|+|+++++.++.||++++..
T Consensus 233 ~~~v-v~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~G~~ 282 (283)
T PF03096_consen 233 VDDV-VEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGMGYL 282 (283)
T ss_dssp HHHH-HHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHTTB-
T ss_pred hhhH-HHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccCCcC
Confidence 2333 4455554 4 578999999999999999999999999999998864
No 39
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.92 E-value=1.7e-23 Score=194.92 Aligned_cols=115 Identities=23% Similarity=0.312 Sum_probs=96.4
Q ss_pred eEEEee-CCeeEEEEEcCCCCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC-----------ChHHHHHH
Q 015755 20 LHKIPI-GTKQWRYYDFGPKVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW-----------NHHEWIQA 87 (401)
Q Consensus 20 ~~~~~~-~~~~l~y~~~G~~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~-----------s~~~~a~d 87 (401)
..+++. ++.+++|...|.+++++|||+||++++...+ .....+..++|+|+++|+|||| +.+++++|
T Consensus 6 ~~~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 84 (306)
T TIGR01249 6 SGYLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVAD 84 (306)
T ss_pred CCeEEcCCCcEEEEEECcCCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHH
Confidence 445555 5788999999987788999999998876543 3444454468999999999986 35678999
Q ss_pred HHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCC
Q 015755 88 FEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDT 135 (401)
Q Consensus 88 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~ 135 (401)
+..++++++.++++++||||||.+++.++.++|++|+++|++++....
T Consensus 85 l~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~ 132 (306)
T TIGR01249 85 IEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLR 132 (306)
T ss_pred HHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCC
Confidence 999999999999999999999999999999999999999999986543
No 40
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.92 E-value=2.4e-23 Score=228.90 Aligned_cols=241 Identities=16% Similarity=0.117 Sum_probs=153.7
Q ss_pred EEEEEcCC-CCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCCC-----------------hHHHHHHHHHH
Q 015755 30 WRYYDFGP-KVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWN-----------------HHEWIQAFEKF 91 (401)
Q Consensus 30 l~y~~~G~-~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~s-----------------~~~~a~dl~~~ 91 (401)
++|+..|. .++|+|||+||++++...|..++..|. ++|+|+++|+||||. ++++++++..+
T Consensus 1360 i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~-~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~l 1438 (1655)
T PLN02980 1360 IKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAIS-GSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKL 1438 (1655)
T ss_pred EEEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHh-CCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHH
Confidence 45566675 346899999999999999999999997 579999999999862 46788999999
Q ss_pred HHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhc-CCcc---cccccchhhHHHHHHhhccCCC
Q 015755 92 LDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAA-MPWA---PIVSWTPSFLLKRYVLTGIHDG 167 (401)
Q Consensus 92 l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~ 167 (401)
+++++.++++|+||||||.+++.+|.++|++|+++|++++.+........ .... .............+....+...
T Consensus 1439 l~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 1518 (1655)
T PLN02980 1439 IEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGE 1518 (1655)
T ss_pred HHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHH
Confidence 99999999999999999999999999999999999999875432211000 0000 0000000000000000000000
Q ss_pred CCCC--chhhhHHHHHHhhhhcCHHHHHHHhhhh---cccc-cccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCC-
Q 015755 168 PHEP--FIADSVDFVVCQVETLSREDLASRLTLT---ADAA-SVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSG- 240 (401)
Q Consensus 168 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~- 240 (401)
.... ........+...........+...+... .... ......+++|+|+|+|++| ..++ ...+.+.+.+++
T Consensus 1519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D-~~~~-~~a~~~~~~i~~a 1596 (1655)
T PLN02980 1519 LWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKD-VKFK-QIAQKMYREIGKS 1596 (1655)
T ss_pred HhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCC-CccH-HHHHHHHHHcccc
Confidence 0000 0000111111111111112211111110 0000 1112347899999999999 4554 566677777665
Q ss_pred -----------CeEEEecCCCCCCCcCChHHHHHHHHHHHhhcc
Q 015755 241 -----------ARQAYMKTGGEFPFLSRPDEVNLHLQLHLRRVG 273 (401)
Q Consensus 241 -----------~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~~~~ 273 (401)
+++++++++||++++|+|+++++.|.+||++..
T Consensus 1597 ~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1597 KESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLH 1640 (1655)
T ss_pred ccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhcc
Confidence 489999999999999999999999999999765
No 41
>PRK05855 short chain dehydrogenase; Validated
Probab=99.91 E-value=8.9e-23 Score=207.01 Aligned_cols=252 Identities=15% Similarity=0.123 Sum_probs=158.1
Q ss_pred eEEEeeCCeeEEEEEcCCCCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC-----------ChHHHHHHH
Q 015755 20 LHKIPIGTKQWRYYDFGPKVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW-----------NHHEWIQAF 88 (401)
Q Consensus 20 ~~~~~~~~~~l~y~~~G~~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~-----------s~~~~a~dl 88 (401)
...+..+|.+++|+.+|++++|+|||+||++++...|.+++..|. ++|+|+++|+|||| +++++++|+
T Consensus 5 ~~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl 83 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLA-DRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDF 83 (582)
T ss_pred EEEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhh-cceEEEEecCCCCCCCCCCCcccccCHHHHHHHH
Confidence 455677999999999998778999999999999999999999995 68999999999995 467899999
Q ss_pred HHHHHHhCCce-EEEEEEchhHHHHHHHHHh--CCcccceEEEecCCCCCh--hHhhcCCcccccccch---hhHHHHHH
Q 015755 89 EKFLDAIDVHH-IHLYGTSLGGFLAQLFAQH--RPRRVRSLVLSNTFLDTH--SFAAAMPWAPIVSWTP---SFLLKRYV 160 (401)
Q Consensus 89 ~~~l~~l~~~~-v~lvGhS~Gg~ia~~~A~~--~P~~V~~lvli~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~ 160 (401)
..++++++..+ ++|+||||||.+++.++.+ .++++..++.++++.... .+.............. ........
T Consensus 84 ~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (582)
T PRK05855 84 AAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQLLRSWY 163 (582)
T ss_pred HHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHHHhhhHH
Confidence 99999998765 9999999999999888776 345566665555432110 0000000000000000 00000000
Q ss_pred hhccCCCCCC-----CchhhhHHHHHHhhhhcCH-------------HHHHHHhhh-hcccccccccccCCcEEEEEeCC
Q 015755 161 LTGIHDGPHE-----PFIADSVDFVVCQVETLSR-------------EDLASRLTL-TADAASVGNLLLSDSHITIMDTN 221 (401)
Q Consensus 161 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~-~~~~~~~~~~~i~~Pvlli~G~~ 221 (401)
.......... ................... ......... ...........+++|+++|+|++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~ 243 (582)
T PRK05855 164 IYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVPVQLIVPTG 243 (582)
T ss_pred HHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCceEEEEeCC
Confidence 0000000000 0000000000000000000 000000000 00000011223789999999999
Q ss_pred CCCCCcHHHHHHHHHHcCCCeEEEecCCCCCCCcCChHHHHHHHHHHHhhccC
Q 015755 222 DYCATSQQLKDQLSERYSGARQAYMKTGGEFPFLSRPDEVNLHLQLHLRRVGV 274 (401)
Q Consensus 222 D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~~~~~ 274 (401)
| .+++....+.+.+..++.++++++ +||++++|+|+++++.|.+|++....
T Consensus 244 D-~~v~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~~ 294 (582)
T PRK05855 244 D-PYVRPALYDDLSRWVPRLWRREIK-AGHWLPMSHPQVLAAAVAEFVDAVEG 294 (582)
T ss_pred C-cccCHHHhccccccCCcceEEEcc-CCCcchhhChhHHHHHHHHHHHhccC
Confidence 9 688999999888888888888886 79999999999999999999998654
No 42
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.91 E-value=1.5e-22 Score=186.10 Aligned_cols=251 Identities=14% Similarity=0.136 Sum_probs=165.6
Q ss_pred CceEEEeeCCeeEEEEEcCCCCC--CcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCCCh-----------HHH
Q 015755 18 VPLHKIPIGTKQWRYYDFGPKVV--PPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWNH-----------HEW 84 (401)
Q Consensus 18 ~~~~~~~~~~~~l~y~~~G~~~~--p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~s~-----------~~~ 84 (401)
....+...++..++|+.+-.... .+||++||++....-|..++..|..+||.|+++|+||||.+ +++
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~ 89 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADY 89 (298)
T ss_pred ccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHH
Confidence 34566778999999998876533 58999999999999999999999999999999999999854 788
Q ss_pred HHHHHHHHHHhCC----ceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChh--Hhh---cCCcccccccchhhH
Q 015755 85 IQAFEKFLDAIDV----HHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHS--FAA---AMPWAPIVSWTPSFL 155 (401)
Q Consensus 85 a~dl~~~l~~l~~----~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~--~~~---~~~~~~~~~~~~~~~ 155 (401)
.+|+..+++.... .+++++||||||.|++.++.+++..|+++||.+|...... ... .........+.+...
T Consensus 90 ~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~p~~~ 169 (298)
T COG2267 90 VDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIRPKLP 169 (298)
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhcccccccccccc
Confidence 9999999988753 5899999999999999999999999999999999876653 100 000001111111111
Q ss_pred HHHHHhhccCCCCCCCchhhhHHHHHHhhhh-------cCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCc-
Q 015755 156 LKRYVLTGIHDGPHEPFIADSVDFVVCQVET-------LSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATS- 227 (401)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~- 227 (401)
... . . ...................... .....+...+.............+.+|+|+++|++| .+++
T Consensus 170 ~~~-~-~--~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D-~vv~~ 244 (298)
T COG2267 170 VDS-N-L--LEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDD-RVVDN 244 (298)
T ss_pred cCc-c-c--ccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCC-ccccC
Confidence 110 0 0 0011111111111111111100 111111111111111222334557889999999999 5777
Q ss_pred HHHHHHHHHHc--CCCeEEEecCCCCCCCcCC-h--HHHHHHHHHHHhhcc
Q 015755 228 QQLKDQLSERY--SGARQAYMKTGGEFPFLSR-P--DEVNLHLQLHLRRVG 273 (401)
Q Consensus 228 ~~~~~~~~~~~--~~~~~~~i~~~GH~~~~e~-p--~~v~~~i~~fl~~~~ 273 (401)
.+....+.+.. ++.++++++|+.|.++.|. . +++.+.+.+|+.+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 245 VEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEAL 295 (298)
T ss_pred cHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhc
Confidence 45555554444 5678999999999988874 4 788899999988653
No 43
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.90 E-value=1.6e-22 Score=192.97 Aligned_cols=238 Identities=15% Similarity=0.118 Sum_probs=151.9
Q ss_pred eCCeeEEEEEcCCC---CCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC----------ChHHHHHHHHHH
Q 015755 25 IGTKQWRYYDFGPK---VVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW----------NHHEWIQAFEKF 91 (401)
Q Consensus 25 ~~~~~l~y~~~G~~---~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~----------s~~~~a~dl~~~ 91 (401)
-++..++|..+.+. .+++|||+||++++...|..++..|.++||+|+++|+|||| +.+.+++|+..+
T Consensus 118 ~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~ 197 (395)
T PLN02652 118 ARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAF 197 (395)
T ss_pred CCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHH
Confidence 35567888887663 24689999999999999999999998889999999999996 456778899999
Q ss_pred HHHhCC----ceEEEEEEchhHHHHHHHHHhCCc---ccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhc-
Q 015755 92 LDAIDV----HHIHLYGTSLGGFLAQLFAQHRPR---RVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTG- 163 (401)
Q Consensus 92 l~~l~~----~~v~lvGhS~Gg~ia~~~A~~~P~---~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 163 (401)
++.+.. .+++++||||||.+++.++. +|+ +|+++|+.+|......... ...... .+........
T Consensus 198 l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~------~~~~~~-~l~~~~~p~~~ 269 (395)
T PLN02652 198 LEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHP------IVGAVA-PIFSLVAPRFQ 269 (395)
T ss_pred HHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchH------HHHHHH-HHHHHhCCCCc
Confidence 888753 37999999999999997764 564 8999999998653221000 000000 0000000000
Q ss_pred cCCCCC--CCchhhhHHHHHHhhh-h-----cCHHHHH-HHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHH
Q 015755 164 IHDGPH--EPFIADSVDFVVCQVE-T-----LSREDLA-SRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQL 234 (401)
Q Consensus 164 ~~~~~~--~~~~~~~~~~~~~~~~-~-----~~~~~~~-~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~ 234 (401)
+..... .....+ ......... . ....... ..+... .........+++|+|+++|++| .+++.+..+.+
T Consensus 270 ~~~~~~~~~~~s~~-~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~-~~l~~~L~~I~vPvLIi~G~~D-~vvp~~~a~~l 346 (395)
T PLN02652 270 FKGANKRGIPVSRD-PAALLAKYSDPLVYTGPIRVRTGHEILRIS-SYLTRNFKSVTVPFMVLHGTAD-RVTDPLASQDL 346 (395)
T ss_pred ccCcccccCCcCCC-HHHHHHHhcCCCcccCCchHHHHHHHHHHH-HHHHhhcccCCCCEEEEEeCCC-CCCCHHHHHHH
Confidence 000000 000000 000000000 0 0000000 000000 0001122346899999999999 68898988888
Q ss_pred HHHcC--CCeEEEecCCCCCCCcC-ChHHHHHHHHHHHhhcc
Q 015755 235 SERYS--GARQAYMKTGGEFPFLS-RPDEVNLHLQLHLRRVG 273 (401)
Q Consensus 235 ~~~~~--~~~~~~i~~~GH~~~~e-~p~~v~~~i~~fl~~~~ 273 (401)
.+..+ +.+++++++++|.++.+ +++++.+.|.+||++.-
T Consensus 347 ~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~ 388 (395)
T PLN02652 347 YNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRL 388 (395)
T ss_pred HHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHh
Confidence 87764 47899999999998777 79999999999998753
No 44
>PLN02511 hydrolase
Probab=99.89 E-value=2.7e-22 Score=192.10 Aligned_cols=250 Identities=13% Similarity=0.129 Sum_probs=148.3
Q ss_pred eEEEee-CCeeEEEEEc------CCCCCCcEEEeCCCCCChH-HH-HHHHHHHhhCCcEEEEecCCCCCCh---------
Q 015755 20 LHKIPI-GTKQWRYYDF------GPKVVPPLICLPGTAGTAE-VY-YKQIMALSMKGYRVISVDIPRVWNH--------- 81 (401)
Q Consensus 20 ~~~~~~-~~~~l~y~~~------G~~~~p~vvllHG~~~~~~-~~-~~~~~~L~~~g~~Vi~~D~pG~~s~--------- 81 (401)
...+++ +|..+.+--. ++.++|+||++||+++++. .| ..++..+.++||+|+++|+||||..
T Consensus 73 re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~ 152 (388)
T PLN02511 73 RECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYS 152 (388)
T ss_pred EEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEc
Confidence 344554 5556554221 2345789999999988764 35 4566666668999999999999743
Q ss_pred HHHHHHHHHHHHHhCC----ceEEEEEEchhHHHHHHHHHhCCcc--cceEEEecCCCCChhHhhcCCcccccccchhhH
Q 015755 82 HEWIQAFEKFLDAIDV----HHIHLYGTSLGGFLAQLFAQHRPRR--VRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFL 155 (401)
Q Consensus 82 ~~~a~dl~~~l~~l~~----~~v~lvGhS~Gg~ia~~~A~~~P~~--V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (401)
..+++|+.+++++++. .+++++||||||.+++.++.++|++ |.++++++++............. ........+
T Consensus 153 ~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~-~~~~y~~~~ 231 (388)
T PLN02511 153 ASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKG-FNNVYDKAL 231 (388)
T ss_pred CCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhcc-HHHHHHHHH
Confidence 2567888888888765 5899999999999999999999987 88988887765431111000000 000000001
Q ss_pred H---HHHHh------hccCCCCCCCchh--hhHHHHHHhhhhc--CHHHHHHHhhhhcccccccccccCCcEEEEEeCCC
Q 015755 156 L---KRYVL------TGIHDGPHEPFIA--DSVDFVVCQVETL--SREDLASRLTLTADAASVGNLLLSDSHITIMDTND 222 (401)
Q Consensus 156 ~---~~~~~------~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D 222 (401)
. ..... ............. .....+....... .......++.... .......+++|+|+|+|++|
T Consensus 232 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s--~~~~L~~I~vPtLiI~g~dD 309 (388)
T PLN02511 232 AKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSS--SSDSIKHVRVPLLCIQAAND 309 (388)
T ss_pred HHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcC--chhhhccCCCCeEEEEcCCC
Confidence 0 11100 0000000000000 0000011100000 0000000111000 11122347899999999999
Q ss_pred CCCCcHHHH-HHHHHHcCCCeEEEecCCCCCCCcCChHH------HHHHHHHHHhhcc
Q 015755 223 YCATSQQLK-DQLSERYSGARQAYMKTGGEFPFLSRPDE------VNLHLQLHLRRVG 273 (401)
Q Consensus 223 ~~~~~~~~~-~~~~~~~~~~~~~~i~~~GH~~~~e~p~~------v~~~i~~fl~~~~ 273 (401)
.+++.... ..+.+..|++++++++++||++++|+|+. +++.+.+|++.+.
T Consensus 310 -pi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~ 366 (388)
T PLN02511 310 -PIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALE 366 (388)
T ss_pred -CcCCcccCcHhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHH
Confidence 57776654 45667789999999999999999999976 5899999998764
No 45
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.89 E-value=9.9e-23 Score=167.12 Aligned_cols=241 Identities=14% Similarity=0.127 Sum_probs=169.2
Q ss_pred cccCCceEEEeeCCeeEEEEEcCCCCCCcEEEeCCCCCChH-HHHHHHHHHhhC-CcEEEEecCCCCCCh----------
Q 015755 14 FKSQVPLHKIPIGTKQWRYYDFGPKVVPPLICLPGTAGTAE-VYYKQIMALSMK-GYRVISVDIPRVWNH---------- 81 (401)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~y~~~G~~~~p~vvllHG~~~~~~-~~~~~~~~L~~~-g~~Vi~~D~pG~~s~---------- 81 (401)
+.+.+.+..+.++|.+++|..+|.+. ..|++++|..++.+ +|.+++..|-.. -++|+++|-||||.+
T Consensus 17 ~~~~~te~kv~vng~ql~y~~~G~G~-~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ 95 (277)
T KOG2984|consen 17 TQSDYTESKVHVNGTQLGYCKYGHGP-NYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQ 95 (277)
T ss_pred ccchhhhheeeecCceeeeeecCCCC-ceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHH
Confidence 34467788899999999999999853 37889999877765 788888777544 389999999999743
Q ss_pred --HHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChh--HhhcCCcccccccchhhHHH
Q 015755 82 --HEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHS--FAAAMPWAPIVSWTPSFLLK 157 (401)
Q Consensus 82 --~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 157 (401)
..-+++..++++.+..+++.++|+|-||..|+..|+++++.|.++|+.+....... ............|.+..
T Consensus 96 ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~--- 172 (277)
T KOG2984|consen 96 FFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARG--- 172 (277)
T ss_pred HHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhh---
Confidence 45577788899999999999999999999999999999999999999987543211 11111111111111110
Q ss_pred HHHhhccCCCCCCCchh-hhHHHHHHhhhhcCHHHHHHHhhhhcccc--cccccccCCcEEEEEeCCCCCCCcHHHHHHH
Q 015755 158 RYVLTGIHDGPHEPFIA-DSVDFVVCQVETLSREDLASRLTLTADAA--SVGNLLLSDSHITIMDTNDYCATSQQLKDQL 234 (401)
Q Consensus 158 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~ 234 (401)
.+++.. -..+.+..++..+... ...+....+.. ..-...++||+++++|++| ++++...+-.+
T Consensus 173 -----------R~P~e~~Yg~e~f~~~wa~wvD~--v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kD-p~~~~~hv~fi 238 (277)
T KOG2984|consen 173 -----------RQPYEDHYGPETFRTQWAAWVDV--VDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKD-PFCGDPHVCFI 238 (277)
T ss_pred -----------cchHHHhcCHHHHHHHHHHHHHH--HHHHhhcCCCchHhhhcccccCCeeEeeCCcC-CCCCCCCccch
Confidence 000000 0122222222222110 00011000100 1112348899999999999 68999999999
Q ss_pred HHHcCCCeEEEecCCCCCCCcCChHHHHHHHHHHHhhc
Q 015755 235 SERYSGARQAYMKTGGEFPFLSRPDEVNLHLQLHLRRV 272 (401)
Q Consensus 235 ~~~~~~~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~~~ 272 (401)
....+.+++.++|.++|.+++..+++|+..+.+||+..
T Consensus 239 ~~~~~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 239 PVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred hhhcccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999853
No 46
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.89 E-value=1.5e-21 Score=185.67 Aligned_cols=247 Identities=15% Similarity=0.151 Sum_probs=158.2
Q ss_pred eeCCeeEEEEEcCCC---CCCcEEEeCCCCCChHH-------------HHHHHH---HHhhCCcEEEEecCCCC------
Q 015755 24 PIGTKQWRYYDFGPK---VVPPLICLPGTAGTAEV-------------YYKQIM---ALSMKGYRVISVDIPRV------ 78 (401)
Q Consensus 24 ~~~~~~l~y~~~G~~---~~p~vvllHG~~~~~~~-------------~~~~~~---~L~~~g~~Vi~~D~pG~------ 78 (401)
.++..++.|+.+|+. ..++||++|++.+++.. |..++. .|....|.||++|..|-
T Consensus 37 ~l~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p 116 (389)
T PRK06765 37 TIPDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDP 116 (389)
T ss_pred CcCCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCC
Confidence 346788999999973 34799999999996532 544542 34445799999999862
Q ss_pred ------------------------CChHHHHHHHHHHHHHhCCceEE-EEEEchhHHHHHHHHHhCCcccceEEEecCCC
Q 015755 79 ------------------------WNHHEWIQAFEKFLDAIDVHHIH-LYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFL 133 (401)
Q Consensus 79 ------------------------~s~~~~a~dl~~~l~~l~~~~v~-lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~ 133 (401)
++++++++++..+++++++++++ ++||||||++++.+|.++|++|+++|++++..
T Consensus 117 ~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~ 196 (389)
T PRK06765 117 NVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNP 196 (389)
T ss_pred CCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCC
Confidence 25789999999999999999986 99999999999999999999999999998876
Q ss_pred CChhHh-----h----cC----Ccccccc---cchhh-------------HHHHHHhhccCCCC---CCC---ch-hhhH
Q 015755 134 DTHSFA-----A----AM----PWAPIVS---WTPSF-------------LLKRYVLTGIHDGP---HEP---FI-ADSV 177 (401)
Q Consensus 134 ~~~~~~-----~----~~----~~~~~~~---~~~~~-------------~~~~~~~~~~~~~~---~~~---~~-~~~~ 177 (401)
....+. . .. .|..-.. ..+.. .....+...+.... ... .. ....
T Consensus 197 ~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~ 276 (389)
T PRK06765 197 QNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSF 276 (389)
T ss_pred CCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhH
Confidence 543321 0 00 0000000 00000 00011111111110 000 00 0011
Q ss_pred HHH-HHh----hhhcCHHHHHHHhhhh--ccc------ccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcC----C
Q 015755 178 DFV-VCQ----VETLSREDLASRLTLT--ADA------ASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYS----G 240 (401)
Q Consensus 178 ~~~-~~~----~~~~~~~~~~~~~~~~--~~~------~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~----~ 240 (401)
+.+ ..+ ........+....... .+. .......+++|+++|+|++| .++|++..+.+.+.++ +
T Consensus 277 e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D-~l~p~~~~~~la~~lp~~~~~ 355 (389)
T PRK06765 277 EKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQD-LLQPPRYNYKMVDILQKQGKY 355 (389)
T ss_pred HHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCC-CCCCHHHHHHHHHHhhhcCCC
Confidence 111 111 1112222221111111 000 01112247899999999999 7889999998998886 6
Q ss_pred CeEEEecC-CCCCCCcCChHHHHHHHHHHHhh
Q 015755 241 ARQAYMKT-GGEFPFLSRPDEVNLHLQLHLRR 271 (401)
Q Consensus 241 ~~~~~i~~-~GH~~~~e~p~~v~~~i~~fl~~ 271 (401)
++++++++ +||++++++|+++++.|.+||++
T Consensus 356 a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 356 AEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred eEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 89999985 99999999999999999999974
No 47
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.87 E-value=1.3e-20 Score=157.58 Aligned_cols=213 Identities=17% Similarity=0.205 Sum_probs=144.3
Q ss_pred CcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC---------ChHHHHHHHHHHHHHh---CCceEEEEEEchh
Q 015755 41 PPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW---------NHHEWIQAFEKFLDAI---DVHHIHLYGTSLG 108 (401)
Q Consensus 41 p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~---------s~~~~a~dl~~~l~~l---~~~~v~lvGhS~G 108 (401)
..||||||+.|+....+.+.+.|.++||+|.++.+|||| +.++|.+++.+..++| +.+.|.++|.|||
T Consensus 16 ~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlSmG 95 (243)
T COG1647 16 RAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLSMG 95 (243)
T ss_pred EEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeecch
Confidence 689999999999999999999999999999999999997 4578888877766555 5679999999999
Q ss_pred HHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCCCCCCCchhhhHHHHHHhhhhcC
Q 015755 109 GFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHDGPHEPFIADSVDFVVCQVETLS 188 (401)
Q Consensus 109 g~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (401)
|.+++.+|.++| ++++|.++++.....+..... . ++. ++ ..... ......+..+..........
T Consensus 96 Gv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie--~--------~l~-y~-~~~kk--~e~k~~e~~~~e~~~~~~~~ 159 (243)
T COG1647 96 GVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIE--G--------LLE-YF-RNAKK--YEGKDQEQIDKEMKSYKDTP 159 (243)
T ss_pred hHHHHHHHhhCC--ccceeeecCCcccccchhhhH--H--------HHH-HH-HHhhh--ccCCCHHHHHHHHHHhhcch
Confidence 999999999998 999999998765443221110 0 000 00 00000 00111111111111111101
Q ss_pred HHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcC--CCeEEEecCCCCCCCcC-ChHHHHHHH
Q 015755 189 REDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYS--GARQAYMKTGGEFPFLS-RPDEVNLHL 265 (401)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~--~~~~~~i~~~GH~~~~e-~p~~v~~~i 265 (401)
.......... ..........|..|++++.|.+| ..++.+.+..+..... ..++.+++++||.+..+ ..+.+.+.+
T Consensus 160 ~~~~~~~~~~-i~~~~~~~~~I~~pt~vvq~~~D-~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V 237 (243)
T COG1647 160 MTTTAQLKKL-IKDARRSLDKIYSPTLVVQGRQD-EMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDV 237 (243)
T ss_pred HHHHHHHHHH-HHHHHhhhhhcccchhheecccC-CCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHH
Confidence 1111111110 11111112236779999999999 5889999988887763 47899999999987765 578999999
Q ss_pred HHHHhh
Q 015755 266 QLHLRR 271 (401)
Q Consensus 266 ~~fl~~ 271 (401)
..||+.
T Consensus 238 ~~FL~~ 243 (243)
T COG1647 238 ITFLEK 243 (243)
T ss_pred HHHhhC
Confidence 999963
No 48
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.87 E-value=2.1e-20 Score=166.99 Aligned_cols=224 Identities=18% Similarity=0.266 Sum_probs=153.2
Q ss_pred CCCCcEEEeCCCCCChHHHHHHHHHHhhC-CcEEEEecCCCCC--------ChHHHHHHHHHHHHHhC----CceEEEEE
Q 015755 38 KVVPPLICLPGTAGTAEVYYKQIMALSMK-GYRVISVDIPRVW--------NHHEWIQAFEKFLDAID----VHHIHLYG 104 (401)
Q Consensus 38 ~~~p~vvllHG~~~~~~~~~~~~~~L~~~-g~~Vi~~D~pG~~--------s~~~~a~dl~~~l~~l~----~~~v~lvG 104 (401)
...|+++++||+.++...|..+...|+.+ +..|+++|.|.|| +.+.+++|+..||+..+ ..+++++|
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~G 129 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTRLDPVVLLG 129 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHcccccccCCceecc
Confidence 46899999999999999999999999865 6799999999997 46899999999999885 56899999
Q ss_pred EchhH-HHHHHHHHhCCcccceEEEecCCCCChh--Hh-------hcCCccccc--ccchh------------hHHHHHH
Q 015755 105 TSLGG-FLAQLFAQHRPRRVRSLVLSNTFLDTHS--FA-------AAMPWAPIV--SWTPS------------FLLKRYV 160 (401)
Q Consensus 105 hS~Gg-~ia~~~A~~~P~~V~~lvli~~~~~~~~--~~-------~~~~~~~~~--~~~~~------------~~~~~~~ 160 (401)
||||| .+++..+.++|+.+..+|+++..+...+ .. ......... ..... ..+..+.
T Consensus 130 HsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~fi 209 (315)
T KOG2382|consen 130 HSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQFI 209 (315)
T ss_pred cCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHHHHH
Confidence 99999 8888888999999999999987653110 00 000000000 00000 0111111
Q ss_pred hhccCCCCCCCchhhhHHHHHHhhhhcCHHHHHHHhhh---hcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHH
Q 015755 161 LTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTL---TADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSER 237 (401)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~ 237 (401)
..++.......... ...+...+...+.. ..............|++++.|.++ ..++.+....+.+.
T Consensus 210 ~~nl~~~~~~~s~~----------w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S-~fv~~~~~~~~~~~ 278 (315)
T KOG2382|consen 210 LTNLKKSPSDGSFL----------WRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQS-KFVPDEHYPRMEKI 278 (315)
T ss_pred HHhcCcCCCCCceE----------EEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCC-CCcChhHHHHHHHh
Confidence 11111100000000 00111122222211 111111212446679999999999 68999999999999
Q ss_pred cCCCeEEEecCCCCCCCcCChHHHHHHHHHHHhhc
Q 015755 238 YSGARQAYMKTGGEFPFLSRPDEVNLHLQLHLRRV 272 (401)
Q Consensus 238 ~~~~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~~~ 272 (401)
+|+++++.++++||+++.|+|+++.+.|.+|+.+.
T Consensus 279 fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 279 FPNVEVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred ccchheeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999864
No 49
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.87 E-value=7.4e-21 Score=167.10 Aligned_cols=244 Identities=14% Similarity=0.059 Sum_probs=154.8
Q ss_pred EeeCCeeEEEEEcCCCC----CCcEEEeCCCCCCh-HHHHHHHHHHhhCCcEEEEecCCCCC----------ChHHHHHH
Q 015755 23 IPIGTKQWRYYDFGPKV----VPPLICLPGTAGTA-EVYYKQIMALSMKGYRVISVDIPRVW----------NHHEWIQA 87 (401)
Q Consensus 23 ~~~~~~~l~y~~~G~~~----~p~vvllHG~~~~~-~~~~~~~~~L~~~g~~Vi~~D~pG~~----------s~~~~a~d 87 (401)
.+..|..+++..|-+.+ +-.|+++||++... ..|..++..|+..||.|+++|++||| +++..++|
T Consensus 33 ~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D 112 (313)
T KOG1455|consen 33 TNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDD 112 (313)
T ss_pred EcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHH
Confidence 34477789888887632 22799999999977 67788899999999999999999996 57888999
Q ss_pred HHHHHHHhC------CceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHh
Q 015755 88 FEKFLDAID------VHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVL 161 (401)
Q Consensus 88 l~~~l~~l~------~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (401)
+..+.+... ..+..|+||||||.|++.++.+.|+...|+|+++|.+....-....+...........++.++.
T Consensus 113 ~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk- 191 (313)
T KOG1455|consen 113 VISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSKLIPTWK- 191 (313)
T ss_pred HHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHHHhCCcee-
Confidence 988887642 2379999999999999999999999999999999987543211111000000000000000100
Q ss_pred hccCCCC--CCCchhh-hHHHHHHh-hhh----cCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHH
Q 015755 162 TGIHDGP--HEPFIAD-SVDFVVCQ-VET----LSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQ 233 (401)
Q Consensus 162 ~~~~~~~--~~~~~~~-~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~ 233 (401)
+.+.. ......+ ........ ... .........+.. ......+...+..|.+++||+.| .++.+..++.
T Consensus 192 --~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~-~~~le~~l~~vtvPflilHG~dD-~VTDp~~Sk~ 267 (313)
T KOG1455|consen 192 --IVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRV-TADLEKNLNEVTVPFLILHGTDD-KVTDPKVSKE 267 (313)
T ss_pred --ecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHH-HHHHHHhcccccccEEEEecCCC-cccCcHHHHH
Confidence 00000 0111111 11111000 000 000111111111 11111122357789999999999 7899999999
Q ss_pred HHHHcC--CCeEEEecCCCCCCCc----CChHHHHHHHHHHHhh
Q 015755 234 LSERYS--GARQAYMKTGGEFPFL----SRPDEVNLHLQLHLRR 271 (401)
Q Consensus 234 ~~~~~~--~~~~~~i~~~GH~~~~----e~p~~v~~~i~~fl~~ 271 (401)
+.+..+ +.++..+||.-|.+.. ++-+.|...|.+||++
T Consensus 268 Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 268 LYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDE 311 (313)
T ss_pred HHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHh
Confidence 998874 6799999999998774 3346677778888875
No 50
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.85 E-value=1.6e-19 Score=173.80 Aligned_cols=226 Identities=14% Similarity=0.138 Sum_probs=142.1
Q ss_pred eEEEeeCCe-eEEEEEcCC---CCCCcEEEeCCCCCCh-HHHHHHHHHHhhCCcEEEEecCCCCCCh---------HHHH
Q 015755 20 LHKIPIGTK-QWRYYDFGP---KVVPPLICLPGTAGTA-EVYYKQIMALSMKGYRVISVDIPRVWNH---------HEWI 85 (401)
Q Consensus 20 ~~~~~~~~~-~l~y~~~G~---~~~p~vvllHG~~~~~-~~~~~~~~~L~~~g~~Vi~~D~pG~~s~---------~~~a 85 (401)
.-.+..+++ .+..+.+-+ +..|+||++||+.+.. ..|..+...|.++||.|+++|+||+|.. ....
T Consensus 170 ~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d~~~~~ 249 (414)
T PRK05077 170 ELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLH 249 (414)
T ss_pred EEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccccHHHHH
Confidence 334444444 666554422 3356777777776654 4677788889888999999999999743 1223
Q ss_pred HHHHHHHHHh---CCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhh
Q 015755 86 QAFEKFLDAI---DVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLT 162 (401)
Q Consensus 86 ~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (401)
.++.+++... +.+++.++||||||++++.+|..+|++|+++|++++....- +.... .....+.... ..+..
T Consensus 250 ~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~-~~~~~----~~~~~p~~~~-~~la~ 323 (414)
T PRK05077 250 QAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTL-LTDPK----RQQQVPEMYL-DVLAS 323 (414)
T ss_pred HHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchh-hcchh----hhhhchHHHH-HHHHH
Confidence 3444555443 45689999999999999999999999999999999865311 00000 0001111111 11111
Q ss_pred ccCCCCCCCchhhhHHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCe
Q 015755 163 GIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGAR 242 (401)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~ 242 (401)
.+... .. ....+...+..+. ... ...-...+++|+|+|+|++| .++|.+..+.+.+..++.+
T Consensus 324 ~lg~~--~~----~~~~l~~~l~~~s---------l~~--~~~l~~~i~~PvLiI~G~~D-~ivP~~~a~~l~~~~~~~~ 385 (414)
T PRK05077 324 RLGMH--DA----SDEALRVELNRYS---------LKV--QGLLGRRCPTPMLSGYWKND-PFSPEEDSRLIASSSADGK 385 (414)
T ss_pred HhCCC--CC----ChHHHHHHhhhcc---------chh--hhhhccCCCCcEEEEecCCC-CCCCHHHHHHHHHhCCCCe
Confidence 11000 00 0011111110000 000 00001347899999999999 6899999999999999999
Q ss_pred EEEecCCCCCCCcCChHHHHHHHHHHHhhc
Q 015755 243 QAYMKTGGEFPFLSRPDEVNLHLQLHLRRV 272 (401)
Q Consensus 243 ~~~i~~~GH~~~~e~p~~v~~~i~~fl~~~ 272 (401)
+++++++ ++.+.++++.+.+.+||+..
T Consensus 386 l~~i~~~---~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 386 LLEIPFK---PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred EEEccCC---CccCCHHHHHHHHHHHHHHH
Confidence 9999986 55689999999999999763
No 51
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.85 E-value=5.5e-20 Score=172.70 Aligned_cols=243 Identities=10% Similarity=0.116 Sum_probs=146.1
Q ss_pred eCCeeEEEEEcCCC-CCCcEEEeCCCCCChH-HH-------------------------HHHHHHHhhCCcEEEEecCCC
Q 015755 25 IGTKQWRYYDFGPK-VVPPLICLPGTAGTAE-VY-------------------------YKQIMALSMKGYRVISVDIPR 77 (401)
Q Consensus 25 ~~~~~l~y~~~G~~-~~p~vvllHG~~~~~~-~~-------------------------~~~~~~L~~~g~~Vi~~D~pG 77 (401)
.+|.+|+++.+.+. .+.+||++||++.... .| ..++..|.++||.|+++|+||
T Consensus 5 ~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rG 84 (332)
T TIGR01607 5 KDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQG 84 (332)
T ss_pred CCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccc
Confidence 47788888887653 2448999999999885 22 357889988999999999999
Q ss_pred CC-------------ChHHHHHHHHHHHHHhC------------------------CceEEEEEEchhHHHHHHHHHhCC
Q 015755 78 VW-------------NHHEWIQAFEKFLDAID------------------------VHHIHLYGTSLGGFLAQLFAQHRP 120 (401)
Q Consensus 78 ~~-------------s~~~~a~dl~~~l~~l~------------------------~~~v~lvGhS~Gg~ia~~~A~~~P 120 (401)
|| +++++++|+..+++.+. ..+++|+||||||.+++.++.+++
T Consensus 85 HG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~ 164 (332)
T TIGR01607 85 HGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLG 164 (332)
T ss_pred cCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhc
Confidence 96 34667888888887642 247999999999999999998764
Q ss_pred c--------ccceEEEecCCCCChhHhhcCCcccccccchhhHHHH--HHhhccCCCCCCCchh--hhHHHHHHhh----
Q 015755 121 R--------RVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKR--YVLTGIHDGPHEPFIA--DSVDFVVCQV---- 184 (401)
Q Consensus 121 ~--------~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~---- 184 (401)
+ .++|+|+++|............ ... ......++.. .+...+.......... ...+.+....
T Consensus 165 ~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~-~~~-~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~Dp~~~~ 242 (332)
T TIGR01607 165 KSNENNDKLNIKGCISLSGMISIKSVGSDDS-FKF-KYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIKFDKFRYD 242 (332)
T ss_pred cccccccccccceEEEeccceEEecccCCCc-chh-hhhHHHHHHHHHHHCCcccccCccccccChhhhhHHhcCccccC
Confidence 3 5899999888643211000000 000 0000000000 0000000000000000 0111110000
Q ss_pred hhcCHHHHHHHhhhhcc-cccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHc--CCCeEEEecCCCCCCCcCC-hHH
Q 015755 185 ETLSREDLASRLTLTAD-AASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERY--SGARQAYMKTGGEFPFLSR-PDE 260 (401)
Q Consensus 185 ~~~~~~~~~~~~~~~~~-~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~--~~~~~~~i~~~GH~~~~e~-p~~ 260 (401)
.......+...+..... ..........+|+|+|+|++| .+++.+..+.+.+.. ++.++.++++++|.++.|. +++
T Consensus 243 ~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D-~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~ 321 (332)
T TIGR01607 243 GGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGD-CVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEE 321 (332)
T ss_pred CcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCC-CccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHH
Confidence 00111111111111100 011122223689999999999 688888888877665 5689999999999999885 689
Q ss_pred HHHHHHHHHh
Q 015755 261 VNLHLQLHLR 270 (401)
Q Consensus 261 v~~~i~~fl~ 270 (401)
+.+.|.+||+
T Consensus 322 v~~~i~~wL~ 331 (332)
T TIGR01607 322 VLKKIIEWIS 331 (332)
T ss_pred HHHHHHHHhh
Confidence 9999999986
No 52
>PRK11071 esterase YqiA; Provisional
Probab=99.84 E-value=2.5e-19 Score=154.34 Aligned_cols=184 Identities=15% Similarity=0.108 Sum_probs=127.8
Q ss_pred CcEEEeCCCCCChHHHHHH--HHHHhh--CCcEEEEecCCCCCChHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHH
Q 015755 41 PPLICLPGTAGTAEVYYKQ--IMALSM--KGYRVISVDIPRVWNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFA 116 (401)
Q Consensus 41 p~vvllHG~~~~~~~~~~~--~~~L~~--~g~~Vi~~D~pG~~s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A 116 (401)
|+||++||++++...|... ...+.+ .+|+|+++|+|||+ +++++++.+++++++.++++++||||||++++.+|
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~--~~~~~~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a 79 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP--ADAAELLESLVLEHGGDPLGLVGSSLGGYYATWLS 79 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH--HHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHH
Confidence 6899999999999999853 345543 37999999999985 68899999999999999999999999999999999
Q ss_pred HhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCCCCCCCchhhhHHHHHHhhhhcCHHHHHHHh
Q 015755 117 QHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRL 196 (401)
Q Consensus 117 ~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (401)
.++|. .+|+++|...+.... ...............+ .+....+....
T Consensus 80 ~~~~~---~~vl~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~-------------~~~~~~~~d~~ 126 (190)
T PRK11071 80 QCFML---PAVVVNPAVRPFELL-----------------TDYLGENENPYTGQQY-------------VLESRHIYDLK 126 (190)
T ss_pred HHcCC---CEEEECCCCCHHHHH-----------------HHhcCCcccccCCCcE-------------EEcHHHHHHHH
Confidence 99983 568898865421110 0000000000000000 01111111111
Q ss_pred hhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEEEecCCCCCCCcCChHHHHHHHHHHHh
Q 015755 197 TLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFLSRPDEVNLHLQLHLR 270 (401)
Q Consensus 197 ~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~ 270 (401)
.. .......++|+++|+|++| .++|.+.+.++.+. ++.++++|++|.. +..+++.+.+.+|+.
T Consensus 127 ~~-----~~~~i~~~~~v~iihg~~D-e~V~~~~a~~~~~~---~~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 127 VM-----QIDPLESPDLIWLLQQTGD-EVLDYRQAVAYYAA---CRQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred hc-----CCccCCChhhEEEEEeCCC-CcCCHHHHHHHHHh---cceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 01 1112346778999999999 68999998888774 5777889999987 555889999999975
No 53
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.83 E-value=9.5e-19 Score=160.14 Aligned_cols=214 Identities=17% Similarity=0.174 Sum_probs=128.9
Q ss_pred CCCcEEEeCCCCC----ChHHHHHHHHHHhhCCcEEEEecCCCCC-------ChHHHHHHHHHHHHHh-----CCceEEE
Q 015755 39 VVPPLICLPGTAG----TAEVYYKQIMALSMKGYRVISVDIPRVW-------NHHEWIQAFEKFLDAI-----DVHHIHL 102 (401)
Q Consensus 39 ~~p~vvllHG~~~----~~~~~~~~~~~L~~~g~~Vi~~D~pG~~-------s~~~~a~dl~~~l~~l-----~~~~v~l 102 (401)
++++||++||++. +...|..+++.|.++||+|+++|+|||| +.+++.+|+.++++.+ +.+++++
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~~~~~~~~~d~~~~~~~l~~~~~g~~~i~l 104 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGENLGFEGIDADIAAAIDAFREAAPHLRRIVA 104 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCCcEEE
Confidence 4568888888763 4455777889998889999999999997 3456778888888776 5578999
Q ss_pred EEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHH----HhhccCCCCCCCchhhhHH
Q 015755 103 YGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRY----VLTGIHDGPHEPFIADSVD 178 (401)
Q Consensus 103 vGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 178 (401)
+||||||.+++.+|.. +.+|+++|+++|.......... .....+..... ....+..+. ..+ .....
T Consensus 105 ~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~g~-~~~-~~~~~ 174 (274)
T TIGR03100 105 WGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAA-------SRIRHYYLGQLLSADFWRKLLSGE-VNL-GSSLR 174 (274)
T ss_pred EEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchH-------HHHHHHHHHHHhChHHHHHhcCCC-ccH-HHHHH
Confidence 9999999999999865 4689999999986432110000 00000110000 000000000 000 00001
Q ss_pred HHHHhhhhc-------CHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHH------HHHHHHc--CCCeE
Q 015755 179 FVVCQVETL-------SREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLK------DQLSERY--SGARQ 243 (401)
Q Consensus 179 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~------~~~~~~~--~~~~~ 243 (401)
.+....... ........+. .....+++|+++++|++|. ..+ ... ....+.+ +++++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~l~~~~~P~ll~~g~~D~-~~~-~~~~~~~~~~~~~~~l~~~~v~~ 245 (274)
T TIGR03100 175 GLGDALLKARQKGDEVAHGGLAERMK-------AGLERFQGPVLFILSGNDL-TAQ-EFADSVLGEPAWRGALEDPGIER 245 (274)
T ss_pred HHHHHHHhhhhcCCCcccchHHHHHH-------HHHHhcCCcEEEEEcCcch-hHH-HHHHHhccChhhHHHhhcCCeEE
Confidence 111100000 0000000000 0011357899999999994 443 332 3444544 78999
Q ss_pred EEecCCCCCCCcCC-hHHHHHHHHHHHhh
Q 015755 244 AYMKTGGEFPFLSR-PDEVNLHLQLHLRR 271 (401)
Q Consensus 244 ~~i~~~GH~~~~e~-p~~v~~~i~~fl~~ 271 (401)
+.+++++|++..+. ++++.+.|.+||++
T Consensus 246 ~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 246 VEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred EecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 99999999985554 59999999999963
No 54
>PRK10985 putative hydrolase; Provisional
Probab=99.83 E-value=2.7e-19 Score=167.83 Aligned_cols=230 Identities=11% Similarity=0.050 Sum_probs=133.7
Q ss_pred CCCcEEEeCCCCCChHH--HHHHHHHHhhCCcEEEEecCCCCCChH---------HHHHHHHHHH----HHhCCceEEEE
Q 015755 39 VVPPLICLPGTAGTAEV--YYKQIMALSMKGYRVISVDIPRVWNHH---------EWIQAFEKFL----DAIDVHHIHLY 103 (401)
Q Consensus 39 ~~p~vvllHG~~~~~~~--~~~~~~~L~~~g~~Vi~~D~pG~~s~~---------~~a~dl~~~l----~~l~~~~v~lv 103 (401)
++|+||++||++++... +..++..|.++||+|+++|+|||+... ...+|+..++ ++++..+++++
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~v 136 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAV 136 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEE
Confidence 46899999999887543 456788888899999999999996321 1345554433 34566789999
Q ss_pred EEchhHHHHHHHHHhCCcc--cceEEEecCCCCChhHhhcCCcccccccchhhHHH---HHHh---hccCCCCCCCc--h
Q 015755 104 GTSLGGFLAQLFAQHRPRR--VRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLK---RYVL---TGIHDGPHEPF--I 173 (401)
Q Consensus 104 GhS~Gg~ia~~~A~~~P~~--V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~--~ 173 (401)
||||||.+++.++.++++. +.++|+++++............ .........+.. .... ........... .
T Consensus 137 G~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 215 (324)
T PRK10985 137 GYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQ-GFSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQL 215 (324)
T ss_pred EecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHH
Confidence 9999999999888887654 8999999987654322111000 000001111100 0000 00111000000 0
Q ss_pred h--hhHHHHHHhhhhc--CHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEEEecCC
Q 015755 174 A--DSVDFVVCQVETL--SREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTG 249 (401)
Q Consensus 174 ~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~ 249 (401)
. .....+....... ........+..... ......+++|+++|+|++| .+++++..+.+.+..++.++++++++
T Consensus 216 ~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~--~~~l~~i~~P~lii~g~~D-~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (324)
T PRK10985 216 KSVRRLREFDDLITARIHGFADAIDYYRQCSA--LPLLNQIRKPTLIIHAKDD-PFMTHEVIPKPESLPPNVEYQLTEHG 292 (324)
T ss_pred hcCCcHHHHhhhheeccCCCCCHHHHHHHCCh--HHHHhCCCCCEEEEecCCC-CCCChhhChHHHHhCCCeEEEECCCC
Confidence 0 0011111000000 00011111111111 1112347789999999999 57888888778778889999999999
Q ss_pred CCCCCcCCh-----HHHHHHHHHHHhhc
Q 015755 250 GEFPFLSRP-----DEVNLHLQLHLRRV 272 (401)
Q Consensus 250 GH~~~~e~p-----~~v~~~i~~fl~~~ 272 (401)
||+.+++.. -...+.+.+|+...
T Consensus 293 GH~~~~~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 293 GHVGFVGGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred CceeeCCCCCCCCCccHHHHHHHHHHHh
Confidence 999998752 35567788888654
No 55
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.81 E-value=4.9e-18 Score=152.68 Aligned_cols=245 Identities=23% Similarity=0.290 Sum_probs=150.1
Q ss_pred eeCCeeEEEEEcCCCCCCcEEEeCCCCCChHHHHHHHHHHhhC--CcEEEEecCCCCCCh-------HHHHHHHHHHHHH
Q 015755 24 PIGTKQWRYYDFGPKVVPPLICLPGTAGTAEVYYKQIMALSMK--GYRVISVDIPRVWNH-------HEWIQAFEKFLDA 94 (401)
Q Consensus 24 ~~~~~~l~y~~~G~~~~p~vvllHG~~~~~~~~~~~~~~L~~~--g~~Vi~~D~pG~~s~-------~~~a~dl~~~l~~ 94 (401)
......+.|...+.. +|+|+++||++++...|......+... .|+|+++|+|||+.. ..+++++..++++
T Consensus 6 ~~~~~~~~~~~~~~~-~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~ 84 (282)
T COG0596 6 AADGVRLAYREAGGG-GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSDPAGYSLSAYADDLAALLDA 84 (282)
T ss_pred cCCCeEEEEeecCCC-CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCCcccccHHHHHHHHHHHHHH
Confidence 345566777777765 679999999999999998843433322 289999999999754 2347899999999
Q ss_pred hCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcC---Cccccccc----ch---hhHHHHHHhhcc
Q 015755 95 IDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAM---PWAPIVSW----TP---SFLLKRYVLTGI 164 (401)
Q Consensus 95 l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~---~~~~~~~~----~~---~~~~~~~~~~~~ 164 (401)
++..+++++||||||.+++.++.++|+++.++|++++........... ........ .. ............
T Consensus 85 ~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (282)
T COG0596 85 LGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALG 164 (282)
T ss_pred hCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhccc
Confidence 999899999999999999999999999999999999865411100000 00000000 00 000000000000
Q ss_pred -CCCC--------CCCchhhhHHHHHHhhhhcCHHHHHHHhhhhcc-cccccccccCCcEEEEEeCCCCCCCcHHHHHHH
Q 015755 165 -HDGP--------HEPFIADSVDFVVCQVETLSREDLASRLTLTAD-AASVGNLLLSDSHITIMDTNDYCATSQQLKDQL 234 (401)
Q Consensus 165 -~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~ 234 (401)
.... ................................. ........+.+|+++++|++| .+.+......+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d-~~~~~~~~~~~ 243 (282)
T COG0596 165 LLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDD-PVVPAELARRL 243 (282)
T ss_pred ccccccccchhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCC-CcCCHHHHHHH
Confidence 0000 000000000000000000000000000000000 111223346789999999999 67777767777
Q ss_pred HHHcCC-CeEEEecCCCCCCCcCChHHHHHHHHHHHh
Q 015755 235 SERYSG-ARQAYMKTGGEFPFLSRPDEVNLHLQLHLR 270 (401)
Q Consensus 235 ~~~~~~-~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~ 270 (401)
.+..++ .++.+++++||+++.++|+.+++.+.+|++
T Consensus 244 ~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 244 AAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred HhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 778885 899999999999999999999999888554
No 56
>PLN02872 triacylglycerol lipase
Probab=99.80 E-value=7.8e-19 Score=167.02 Aligned_cols=252 Identities=14% Similarity=0.137 Sum_probs=152.1
Q ss_pred CCceEEEee-CCeeEEEEEcCC-------CCCCcEEEeCCCCCChHHHH------HHHHHHhhCCcEEEEecCCCCC---
Q 015755 17 QVPLHKIPI-GTKQWRYYDFGP-------KVVPPLICLPGTAGTAEVYY------KQIMALSMKGYRVISVDIPRVW--- 79 (401)
Q Consensus 17 ~~~~~~~~~-~~~~l~y~~~G~-------~~~p~vvllHG~~~~~~~~~------~~~~~L~~~g~~Vi~~D~pG~~--- 79 (401)
+.+.+.+++ ||..|....... ..+|+|||+||++.++..|. .+...|+++||+|+.+|+||++
T Consensus 43 ~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~ 122 (395)
T PLN02872 43 SCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSY 122 (395)
T ss_pred CceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccccccc
Confidence 456777777 777887776421 23689999999999998883 3455688789999999999952
Q ss_pred ---------------ChHHHH-HHHHHHHHHh---CCceEEEEEEchhHHHHHHHHHhCCc---ccceEEEecCCCCChh
Q 015755 80 ---------------NHHEWI-QAFEKFLDAI---DVHHIHLYGTSLGGFLAQLFAQHRPR---RVRSLVLSNTFLDTHS 137 (401)
Q Consensus 80 ---------------s~~~~a-~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~A~~~P~---~V~~lvli~~~~~~~~ 137 (401)
+.++++ .|+.++++.+ ..+++++|||||||.+++.++ .+|+ +|+.+++++|......
T Consensus 123 gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~ 201 (395)
T PLN02872 123 GHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDH 201 (395)
T ss_pred CCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhcc
Confidence 345677 7999998876 347899999999999998544 6776 6888899888653211
Q ss_pred ----HhhcCCc---------ccccccchh-hHHHHHHh-------------hccCCCCCCCchhhhHHHHHHh-------
Q 015755 138 ----FAAAMPW---------APIVSWTPS-FLLKRYVL-------------TGIHDGPHEPFIADSVDFVVCQ------- 183 (401)
Q Consensus 138 ----~~~~~~~---------~~~~~~~~~-~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~------- 183 (401)
....... .....+.+. ..+..... ..+.... ..+.......+...
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~-~~~n~~~~~~~~~~~pagtS~ 280 (395)
T PLN02872 202 VTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTN-CCFNASRIDYYLEYEPHPSSV 280 (395)
T ss_pred CCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCC-cccchhhhhHHHhcCCCcchH
Confidence 1000000 000000000 00110000 0000000 01111111111110
Q ss_pred ---------hh--hcCHHH-----HHHHhhhhccccccccccc--CCcEEEEEeCCCCCCCcHHHHHHHHHHcCC-CeEE
Q 015755 184 ---------VE--TLSRED-----LASRLTLTADAASVGNLLL--SDSHITIMDTNDYCATSQQLKDQLSERYSG-ARQA 244 (401)
Q Consensus 184 ---------~~--~~~~~~-----~~~~~~~~~~~~~~~~~~i--~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~-~~~~ 244 (401)
.. ....-+ ....+.. ..++..+...+ ++|+++++|++| .+++++.++.+.+.+++ .+++
T Consensus 281 k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~-~~pP~Y~l~~i~~~~Pv~i~~G~~D-~lv~~~dv~~l~~~Lp~~~~l~ 358 (395)
T PLN02872 281 KNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQ-VNPPAFDLSLIPKSLPLWMGYGGTD-GLADVTDVEHTLAELPSKPELL 358 (395)
T ss_pred HHHHHHHHHHhcCCcccCCCCchhhHHHhCC-CCCCCcCcccCCCCccEEEEEcCCC-CCCCHHHHHHHHHHCCCccEEE
Confidence 00 000000 0001111 11122222234 579999999999 57888888888888887 6888
Q ss_pred EecCCCCC---CCcCChHHHHHHHHHHHhhc
Q 015755 245 YMKTGGEF---PFLSRPDEVNLHLQLHLRRV 272 (401)
Q Consensus 245 ~i~~~GH~---~~~e~p~~v~~~i~~fl~~~ 272 (401)
.++++||. ...+.|+++.+.|.+|+++.
T Consensus 359 ~l~~~gH~dfi~~~eape~V~~~Il~fL~~~ 389 (395)
T PLN02872 359 YLENYGHIDFLLSTSAKEDVYNHMIQFFRSL 389 (395)
T ss_pred EcCCCCCHHHHhCcchHHHHHHHHHHHHHHh
Confidence 99999995 45588999999999999864
No 57
>PRK10566 esterase; Provisional
Probab=99.80 E-value=1.3e-17 Score=150.66 Aligned_cols=202 Identities=17% Similarity=0.122 Sum_probs=124.1
Q ss_pred EEEEEcCC--CCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCCCh---------H-------HHHHHHHHH
Q 015755 30 WRYYDFGP--KVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWNH---------H-------EWIQAFEKF 91 (401)
Q Consensus 30 l~y~~~G~--~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~s~---------~-------~~a~dl~~~ 91 (401)
++|...+. +..|+||++||++++...|..++..|.++||+|+++|+|||+.. . ...+++..+
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTL 94 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHH
Confidence 55555443 34689999999999998899899999988999999999998631 1 123444444
Q ss_pred HHHh------CCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccC
Q 015755 92 LDAI------DVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIH 165 (401)
Q Consensus 92 l~~l------~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (401)
++.+ +.++++++|||+||.+++.++.++|+....++++++... .... ...+.....
T Consensus 95 ~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~-~~~~-----------------~~~~~~~~~ 156 (249)
T PRK10566 95 RAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYF-TSLA-----------------RTLFPPLIP 156 (249)
T ss_pred HHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHH-HHHH-----------------HHhcccccc
Confidence 4432 346899999999999999999999874444444443210 0000 000000000
Q ss_pred CCCCCCchhhhHHHHHHhhhhcCHHHHHHHhhhhccccccccccc-CCcEEEEEeCCCCCCCcHHHHHHHHHHcCC----
Q 015755 166 DGPHEPFIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLL-SDSHITIMDTNDYCATSQQLKDQLSERYSG---- 240 (401)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~---- 240 (401)
. .................. +.. .....+ ++|+|+|+|++| .+++.+..+.+.+.++.
T Consensus 157 ~---~~~~~~~~~~~~~~~~~~-------------~~~-~~~~~i~~~P~Lii~G~~D-~~v~~~~~~~l~~~l~~~g~~ 218 (249)
T PRK10566 157 E---TAAQQAEFNNIVAPLAEW-------------EVT-HQLEQLADRPLLLWHGLAD-DVVPAAESLRLQQALRERGLD 218 (249)
T ss_pred c---ccccHHHHHHHHHHHhhc-------------Chh-hhhhhcCCCCEEEEEcCCC-CcCCHHHHHHHHHHHHhcCCC
Confidence 0 000000000000000000 000 001123 689999999999 68899988888887642
Q ss_pred --CeEEEecCCCCCCCcCChHHHHHHHHHHHhh
Q 015755 241 --ARQAYMKTGGEFPFLSRPDEVNLHLQLHLRR 271 (401)
Q Consensus 241 --~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~~ 271 (401)
.++++++++||... + ...+.+.+||+.
T Consensus 219 ~~~~~~~~~~~~H~~~---~-~~~~~~~~fl~~ 247 (249)
T PRK10566 219 KNLTCLWEPGVRHRIT---P-EALDAGVAFFRQ 247 (249)
T ss_pred cceEEEecCCCCCccC---H-HHHHHHHHHHHh
Confidence 46778999999863 3 466888888875
No 58
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.79 E-value=6e-18 Score=139.51 Aligned_cols=139 Identities=26% Similarity=0.347 Sum_probs=109.6
Q ss_pred cEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCCChHHHHHHHHHHHHH-----hCCceEEEEEEchhHHHHHHHH
Q 015755 42 PLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWNHHEWIQAFEKFLDA-----IDVHHIHLYGTSLGGFLAQLFA 116 (401)
Q Consensus 42 ~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~s~~~~a~dl~~~l~~-----l~~~~v~lvGhS~Gg~ia~~~A 116 (401)
+||++||++++...|..++..|+++||.|+.+|+||++... ...++..+++. .+.++++++|||+||.+++.++
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~ 79 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSD-GADAVERVLADIRAGYPDPDRIILIGHSMGGAIAANLA 79 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSH-HSHHHHHHHHHHHHHHCTCCEEEEEEETHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccc-hhHHHHHHHHHHHhhcCCCCcEEEEEEccCcHHHHHHh
Confidence 58999999999999999999999999999999999998653 22244444433 3667999999999999999999
Q ss_pred HhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCCCCCCCchhhhHHHHHHhhhhcCHHHHHHHh
Q 015755 117 QHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRL 196 (401)
Q Consensus 117 ~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (401)
.++ .+|+++|++++.+....+.
T Consensus 80 ~~~-~~v~~~v~~~~~~~~~~~~--------------------------------------------------------- 101 (145)
T PF12695_consen 80 ARN-PRVKAVVLLSPYPDSEDLA--------------------------------------------------------- 101 (145)
T ss_dssp HHS-TTESEEEEESESSGCHHHT---------------------------------------------------------
T ss_pred hhc-cceeEEEEecCccchhhhh---------------------------------------------------------
Confidence 998 7899999999831100000
Q ss_pred hhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcC-CCeEEEecCCCCC
Q 015755 197 TLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYS-GARQAYMKTGGEF 252 (401)
Q Consensus 197 ~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~GH~ 252 (401)
..+.|+++++|++| ..++.+..+.+.+.++ +.+++++++++|+
T Consensus 102 ------------~~~~pv~~i~g~~D-~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 102 ------------KIRIPVLFIHGEND-PLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp ------------TTTSEEEEEEETT--SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred ------------ccCCcEEEEEECCC-CcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 01228999999999 6889888888888776 5899999999995
No 59
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.79 E-value=4.4e-19 Score=153.11 Aligned_cols=245 Identities=17% Similarity=0.105 Sum_probs=142.7
Q ss_pred EEeeCCee--EEEEEcCC--CCCCcEEEeCCCCCChHHHHHHHHHHhhC-CcEEEEecCCCCC----------ChHHHHH
Q 015755 22 KIPIGTKQ--WRYYDFGP--KVVPPLICLPGTAGTAEVYYKQIMALSMK-GYRVISVDIPRVW----------NHHEWIQ 86 (401)
Q Consensus 22 ~~~~~~~~--l~y~~~G~--~~~p~vvllHG~~~~~~~~~~~~~~L~~~-g~~Vi~~D~pG~~----------s~~~~a~ 86 (401)
.+++++.. +..+..++ ..+|.++++||+|.+.-+|..++.+|..+ ..+|+++|+|||| +.|.++.
T Consensus 52 dv~i~~~~~t~n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~K 131 (343)
T KOG2564|consen 52 DVSIDGSDLTFNVYLTLPSATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSK 131 (343)
T ss_pred ccccCCCcceEEEEEecCCCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHH
Confidence 45555444 55555554 46899999999999999999999988764 6788999999997 5689999
Q ss_pred HHHHHHHHhC---CceEEEEEEchhHHHHHHHHHh--CCcccceEEEecCCCCChhHhhc------CCcccccccchhhH
Q 015755 87 AFEKFLDAID---VHHIHLYGTSLGGFLAQLFAQH--RPRRVRSLVLSNTFLDTHSFAAA------MPWAPIVSWTPSFL 155 (401)
Q Consensus 87 dl~~~l~~l~---~~~v~lvGhS~Gg~ia~~~A~~--~P~~V~~lvli~~~~~~~~~~~~------~~~~~~~~~~~~~~ 155 (401)
|+..+++.+- ..+++||||||||.||...|.. -|. +.||++|+..-........ .........+...+
T Consensus 132 D~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVEgtAmeAL~~m~~fL~~rP~~F~Si~~Ai 210 (343)
T KOG2564|consen 132 DFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEGTAMEALNSMQHFLRNRPKSFKSIEDAI 210 (343)
T ss_pred HHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEechHHHHHHHHHHHHHhcCCccccchhhHH
Confidence 9999998863 3489999999999999888775 466 9999999875322111000 00000000000000
Q ss_pred HHHHHhhccCCCCCCCchhhhHHHHHHhhh------hcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHH
Q 015755 156 LKRYVLTGIHDGPHEPFIADSVDFVVCQVE------TLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQ 229 (401)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~ 229 (401)
..-+..+.........+ .+...+...-. +..-.....+............+.+++|.++|..+.| .+-..-
T Consensus 211 -~W~v~sg~~Rn~~SArV-smP~~~~~~~eGh~yvwrtdL~kte~YW~gWF~gLS~~Fl~~p~~klLilAg~d-~LDkdL 287 (343)
T KOG2564|consen 211 -EWHVRSGQLRNRDSARV-SMPSQLKQCEEGHCYVWRTDLEKTEQYWKGWFKGLSDKFLGLPVPKLLILAGVD-RLDKDL 287 (343)
T ss_pred -HHHhccccccccccceE-ecchheeeccCCCcEEEEeeccccchhHHHHHhhhhhHhhCCCccceeEEeccc-ccCcce
Confidence 00000000000000000 00000000000 0000000000000011111123347788899998888 342222
Q ss_pred HHHHHHHHcCCCeEEEecCCCCCCCcCChHHHHHHHHHHHhhcc
Q 015755 230 LKDQLSERYSGARQAYMKTGGEFPFLSRPDEVNLHLQLHLRRVG 273 (401)
Q Consensus 230 ~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~~~~ 273 (401)
..-++. ...++.+++.+||+.+.+.|.++++.+..|+.++.
T Consensus 288 tiGQMQ---Gk~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~Rn~ 328 (343)
T KOG2564|consen 288 TIGQMQ---GKFQLQVLPLCGHFVHEDSPHKVAECLCVFWIRNR 328 (343)
T ss_pred eeeeec---cceeeeeecccCceeccCCcchHHHHHHHHHhhhc
Confidence 222222 23589999999999999999999999999998875
No 60
>PRK13604 luxD acyl transferase; Provisional
Probab=99.78 E-value=2.2e-17 Score=149.45 Aligned_cols=228 Identities=14% Similarity=0.039 Sum_probs=138.0
Q ss_pred EEEee-CCeeEEEEEcCCC-----CCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCC-CC---------hHHH
Q 015755 21 HKIPI-GTKQWRYYDFGPK-----VVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRV-WN---------HHEW 84 (401)
Q Consensus 21 ~~~~~-~~~~l~y~~~G~~-----~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~-~s---------~~~~ 84 (401)
+.+.+ +|.+|+-...-+. ..++||++||++++...+..++..|.++||.|+.+|.+|+ |. +...
T Consensus 12 ~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g 91 (307)
T PRK13604 12 HVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSIG 91 (307)
T ss_pred heEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCccccc
Confidence 34444 6677766655442 2468999999999987799999999999999999999876 42 2234
Q ss_pred HHHHHHHHHH---hCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHh
Q 015755 85 IQAFEKFLDA---IDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVL 161 (401)
Q Consensus 85 a~dl~~~l~~---l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (401)
.+|+..+++. .+.+++.|+||||||.+|+..|... .++++|+.+|+............... ..++ .
T Consensus 92 ~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~l~~~~~~~~-~~~p--------~ 160 (307)
T PRK13604 92 KNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDTLERALGYDY-LSLP--------I 160 (307)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHHHHHhhhccc-ccCc--------c
Confidence 5666555544 3556899999999999997776643 39999999998765433221000000 0000 0
Q ss_pred hccCCCCCCCchhhhHHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcC--
Q 015755 162 TGIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYS-- 239 (401)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~-- 239 (401)
........-....-....+................ .. ...+++|+|+|+|++| .++|.+.++.+.+.++
T Consensus 161 ~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i------~~--~~~l~~PvLiIHG~~D-~lVp~~~s~~l~e~~~s~ 231 (307)
T PRK13604 161 DELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTI------NK--MKGLDIPFIAFTANND-SWVKQSEVIDLLDSIRSE 231 (307)
T ss_pred cccccccccccccccHHHHHHHHHhcCccccccHH------HH--HhhcCCCEEEEEcCCC-CccCHHHHHHHHHHhccC
Confidence 00000000000000001111110000000000000 00 1225689999999999 6999999999998875
Q ss_pred CCeEEEecCCCCCCCcCChHHHHHHHHHHHhhcc
Q 015755 240 GARQAYMKTGGEFPFLSRPDEVNLHLQLHLRRVG 273 (401)
Q Consensus 240 ~~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~~~~ 273 (401)
+.+++.++|++|.+. |++ -.+++|.+.+.
T Consensus 232 ~kkl~~i~Ga~H~l~-~~~----~~~~~~~~~~~ 260 (307)
T PRK13604 232 QCKLYSLIGSSHDLG-ENL----VVLRNFYQSVT 260 (307)
T ss_pred CcEEEEeCCCccccC-cch----HHHHHHHHHHH
Confidence 689999999999874 333 24567777664
No 61
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.78 E-value=1.5e-17 Score=157.72 Aligned_cols=243 Identities=15% Similarity=0.139 Sum_probs=141.6
Q ss_pred CCeeEEEEEcC--CCCCCcEEEeCCCCCChHHH-----HHHHHHHhhCCcEEEEecCCCCC------ChHHHHHH-H---
Q 015755 26 GTKQWRYYDFG--PKVVPPLICLPGTAGTAEVY-----YKQIMALSMKGYRVISVDIPRVW------NHHEWIQA-F--- 88 (401)
Q Consensus 26 ~~~~l~y~~~G--~~~~p~vvllHG~~~~~~~~-----~~~~~~L~~~g~~Vi~~D~pG~~------s~~~~a~d-l--- 88 (401)
+...++.+... ...+++||++||+..+...+ ..++..|.++||+|+++|++|++ ++++++.+ +
T Consensus 46 ~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~~~~d~~~~~~~~~ 125 (350)
T TIGR01836 46 DKVVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYLTLDDYINGYIDKC 125 (350)
T ss_pred CcEEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcCCHHHHHHHHHHHH
Confidence 44455444322 23356899999987655554 57889999889999999999975 44555433 3
Q ss_pred -HHHHHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhc-CCcccc---------cccchhhHHH
Q 015755 89 -EKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAA-MPWAPI---------VSWTPSFLLK 157 (401)
Q Consensus 89 -~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~-~~~~~~---------~~~~~~~~~~ 157 (401)
..+++..+.++++++||||||.+++.+++.+|++|+++|+++++......... ..+... ...++...+.
T Consensus 126 v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 205 (350)
T TIGR01836 126 VDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLN 205 (350)
T ss_pred HHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHH
Confidence 44555567889999999999999999999999999999999987653221100 000000 0001111111
Q ss_pred HHHhhccCCC--------------CCCCchhhhHH--HHHHhhhhcCHHHHHHHhhhhcc------------cccccccc
Q 015755 158 RYVLTGIHDG--------------PHEPFIADSVD--FVVCQVETLSREDLASRLTLTAD------------AASVGNLL 209 (401)
Q Consensus 158 ~~~~~~~~~~--------------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~ 209 (401)
..+. .+.+. ........... .+...........+...+..... ........
T Consensus 206 ~~f~-~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~ 284 (350)
T TIGR01836 206 LTFL-MLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKN 284 (350)
T ss_pred HHHH-hcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHh
Confidence 1000 00000 00000000000 00000001111111111110000 00112334
Q ss_pred cCCcEEEEEeCCCCCCCcHHHHHHHHHHcCC--CeEEEecCCCCCCCcCC---hHHHHHHHHHHHhh
Q 015755 210 LSDSHITIMDTNDYCATSQQLKDQLSERYSG--ARQAYMKTGGEFPFLSR---PDEVNLHLQLHLRR 271 (401)
Q Consensus 210 i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~GH~~~~e~---p~~v~~~i~~fl~~ 271 (401)
+.+|+++++|++| .+++++..+.+.+.+++ .++++++ +||...+.. ++++...|.+||++
T Consensus 285 i~~Pvliv~G~~D-~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 285 IKMPILNIYAERD-HLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred CCCCeEEEecCCC-CcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 7899999999999 68898989999888864 4566666 899877654 47889999999875
No 62
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.77 E-value=1.7e-17 Score=162.30 Aligned_cols=217 Identities=14% Similarity=0.100 Sum_probs=134.0
Q ss_pred CCCcEEEeCCCCCChHHHH-----HHHHHHhhCCcEEEEecCCCCC------ChHHH-----HHHHHHHHHHhCCceEEE
Q 015755 39 VVPPLICLPGTAGTAEVYY-----KQIMALSMKGYRVISVDIPRVW------NHHEW-----IQAFEKFLDAIDVHHIHL 102 (401)
Q Consensus 39 ~~p~vvllHG~~~~~~~~~-----~~~~~L~~~g~~Vi~~D~pG~~------s~~~~-----a~dl~~~l~~l~~~~v~l 102 (401)
.++|||++||+......|+ .++..|.++||+|+++|++|++ +.+++ .+.+..+++.++.+++++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~l 266 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVNC 266 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeEE
Confidence 4689999999998888875 6889999899999999999985 23444 445666777788899999
Q ss_pred EEEchhHHHHH----HHHHhC-CcccceEEEecCCCCChhHhhcCCccc------------ccccchhhHHH--------
Q 015755 103 YGTSLGGFLAQ----LFAQHR-PRRVRSLVLSNTFLDTHSFAAAMPWAP------------IVSWTPSFLLK-------- 157 (401)
Q Consensus 103 vGhS~Gg~ia~----~~A~~~-P~~V~~lvli~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~-------- 157 (401)
+||||||.+++ .+++.+ |++|++++++++.++.........+.. ....++...+.
T Consensus 267 vG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lrp 346 (532)
T TIGR01838 267 VGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLRE 346 (532)
T ss_pred EEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcCh
Confidence 99999999852 345555 789999999998765432111100000 00001111000
Q ss_pred ------HHHhhccCCCCCCCchhhhHHHHHHhhhhcCHHHHHHHh----hhhc--------ccccccccccCCcEEEEEe
Q 015755 158 ------RYVLTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRL----TLTA--------DAASVGNLLLSDSHITIMD 219 (401)
Q Consensus 158 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--------~~~~~~~~~i~~Pvlli~G 219 (401)
.++...+...... .....++......+........+ ..+. .........+++|+++|.|
T Consensus 347 ~~l~w~~~v~~yl~g~~~~---~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G 423 (532)
T TIGR01838 347 NDLIWNYYVDNYLKGKSPV---PFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIAT 423 (532)
T ss_pred hhHHHHHHHHHHhcCCCcc---chhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEEEEee
Confidence 0111011100000 00111111111111111111111 1110 0112233447899999999
Q ss_pred CCCCCCCcHHHHHHHHHHcCCCeEEEecCCCCCCCcCChH
Q 015755 220 TNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFLSRPD 259 (401)
Q Consensus 220 ~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~ 259 (401)
++| .++|.+..+.+.+.+++.+..+++++||.+++++|.
T Consensus 424 ~~D-~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 424 RED-HIAPWQSAYRGAALLGGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred CCC-CcCCHHHHHHHHHHCCCCEEEEECCCCCchHhhCCC
Confidence 999 689999999999999999999999999999999875
No 63
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.77 E-value=1.3e-18 Score=154.55 Aligned_cols=198 Identities=20% Similarity=0.261 Sum_probs=120.0
Q ss_pred cEEEEecCCCCC-------------ChHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCC
Q 015755 68 YRVISVDIPRVW-------------NHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLD 134 (401)
Q Consensus 68 ~~Vi~~D~pG~~-------------s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~ 134 (401)
|+|+++|+||++ +.+++++++..++++++.++++++||||||.+++.+|+++|++|+++|++++...
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~ 80 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPD 80 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSH
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeecc
Confidence 789999999984 3468999999999999999999999999999999999999999999999998631
Q ss_pred ChhHhhcCCccc--ccccchhhHHH-------HHHhhcc--CCCCCCCchhhhHH-HHHHhhhhcCHHHH-HHHhh----
Q 015755 135 THSFAAAMPWAP--IVSWTPSFLLK-------RYVLTGI--HDGPHEPFIADSVD-FVVCQVETLSREDL-ASRLT---- 197 (401)
Q Consensus 135 ~~~~~~~~~~~~--~~~~~~~~~~~-------~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~---- 197 (401)
.........+.. ........... ....... .............. .............. .....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00561_consen 81 LPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWNALG 160 (230)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred chhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhcccccc
Confidence 100000000000 00000000000 0000000 00000000000000 00000000000000 00000
Q ss_pred -hhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEEEecCCCCCCCcCChHHHHHHHH
Q 015755 198 -LTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFLSRPDEVNLHLQ 266 (401)
Q Consensus 198 -~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~v~~~i~ 266 (401)
............+.+|+++++|++| .++|......+.+.+|+.++++++++||+.++++|+++++.|.
T Consensus 161 ~~~~~~~~~~l~~i~~p~l~i~~~~D-~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 161 YFSVWDPSPALSNIKVPTLIIWGEDD-PLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHTTTTSEEEEEEETTC-SSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred ccccccccccccccCCCeEEEEeCCC-CCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 0000001112238899999999999 7999999999999999999999999999999999999999886
No 64
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.72 E-value=7.5e-16 Score=164.44 Aligned_cols=240 Identities=15% Similarity=0.169 Sum_probs=142.8
Q ss_pred CCCcEEEeCCCCCChHHHHHH-----HHHHhhCCcEEEEecCCCC---------CChHHHHHHHHHHHHH---hCCceEE
Q 015755 39 VVPPLICLPGTAGTAEVYYKQ-----IMALSMKGYRVISVDIPRV---------WNHHEWIQAFEKFLDA---IDVHHIH 101 (401)
Q Consensus 39 ~~p~vvllHG~~~~~~~~~~~-----~~~L~~~g~~Vi~~D~pG~---------~s~~~~a~dl~~~l~~---l~~~~v~ 101 (401)
.++||||+||++.+...|+.. ++.|.++||+|+++|+ |. .++++++..+.+.++. +..++++
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~-G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~~v~ 144 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF-GSPDKVEGGMERNLADHVVALSEAIDTVKDVTGRDVH 144 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC-CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCCceE
Confidence 568999999999999999865 7889878999999997 43 1444555555555443 3346899
Q ss_pred EEEEchhHHHHHHHHHhC-CcccceEEEecCCCCCh-----hHhhc---C--Ccc----cccccchhhHH----------
Q 015755 102 LYGTSLGGFLAQLFAQHR-PRRVRSLVLSNTFLDTH-----SFAAA---M--PWA----PIVSWTPSFLL---------- 156 (401)
Q Consensus 102 lvGhS~Gg~ia~~~A~~~-P~~V~~lvli~~~~~~~-----~~~~~---~--~~~----~~~~~~~~~~~---------- 156 (401)
++||||||.+++.+|+.+ |++|+++|++++..+.. ..... . .+. .....++....
T Consensus 145 lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~p~ 224 (994)
T PRK07868 145 LVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQMLDPV 224 (994)
T ss_pred EEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHhcChh
Confidence 999999999999998755 56899999988865321 10000 0 000 00000111000
Q ss_pred ---HHH--HhhccCCCCCCCchhhhHHHHHHhhh--hcCH---HHHHHHhhh-hccc--------ccccccccCCcEEEE
Q 015755 157 ---KRY--VLTGIHDGPHEPFIADSVDFVVCQVE--TLSR---EDLASRLTL-TADA--------ASVGNLLLSDSHITI 217 (401)
Q Consensus 157 ---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~-~~~~--------~~~~~~~i~~Pvlli 217 (401)
... +...+.... .....+....+..... .... .++...+.. +... .......+++|+|+|
T Consensus 225 ~~~~~~~~~~~~l~~~~-~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~L~i 303 (994)
T PRK07868 225 KTAKARVDFLRQLHDRE-ALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADITCPVLAF 303 (994)
T ss_pred HHHHHHHHHHHhcCchh-hhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCCCCEEEE
Confidence 000 000111000 0000011111111110 1101 111111111 0000 011235688999999
Q ss_pred EeCCCCCCCcHHHHHHHHHHcCCCeE-EEecCCCCCCCcC---ChHHHHHHHHHHHhhccC-CCCcccc
Q 015755 218 MDTNDYCATSQQLKDQLSERYSGARQ-AYMKTGGEFPFLS---RPDEVNLHLQLHLRRVGV-EARPDLV 281 (401)
Q Consensus 218 ~G~~D~~~~~~~~~~~~~~~~~~~~~-~~i~~~GH~~~~e---~p~~v~~~i~~fl~~~~~-~~~~~~~ 281 (401)
+|++| .+++++..+.+.+.++++++ .+++++||+.++- -++++...|.+||++... .+.|+..
T Consensus 304 ~G~~D-~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~~~~~~~~~ 371 (994)
T PRK07868 304 VGEVD-DIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEGDGDKPENI 371 (994)
T ss_pred EeCCC-CCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhccCCCCCccc
Confidence 99999 68999999999999999987 6789999997764 467889999999998643 3344433
No 65
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.69 E-value=4.4e-15 Score=127.58 Aligned_cols=216 Identities=18% Similarity=0.167 Sum_probs=144.4
Q ss_pred CCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC---------ChHHHHHHHHHHHH-HhCCceEEEEEEchh
Q 015755 39 VVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW---------NHHEWIQAFEKFLD-AIDVHHIHLYGTSLG 108 (401)
Q Consensus 39 ~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~---------s~~~~a~dl~~~l~-~l~~~~v~lvGhS~G 108 (401)
.++.++|+|-.|+++..|..+...|.. ...++++++||.+ +++++++.+..-+. ....+++.++|||||
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~lp~-~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d~P~alfGHSmG 84 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRLPA-DIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLDAPFALFGHSMG 84 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhCCc-hhheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCCCCeeecccchh
Confidence 456899999999999999999998874 6999999999974 67888888888887 455578999999999
Q ss_pred HHHHHHHHHhCC---cccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCCCCCCCchhhhHHHHHHhhh
Q 015755 109 GFLAQLFAQHRP---RRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHDGPHEPFIADSVDFVVCQVE 185 (401)
Q Consensus 109 g~ia~~~A~~~P---~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (401)
|++|.++|.+.- ..+.++.+.+...+.. .....+.......++.....-+-. . ..+.. . ..+...+.
T Consensus 85 a~lAfEvArrl~~~g~~p~~lfisg~~aP~~-----~~~~~i~~~~D~~~l~~l~~lgG~--p-~e~le-d-~El~~l~L 154 (244)
T COG3208 85 AMLAFEVARRLERAGLPPRALFISGCRAPHY-----DRGKQIHHLDDADFLADLVDLGGT--P-PELLE-D-PELMALFL 154 (244)
T ss_pred HHHHHHHHHHHHHcCCCcceEEEecCCCCCC-----cccCCccCCCHHHHHHHHHHhCCC--C-hHHhc-C-HHHHHHHH
Confidence 999999998742 2366777766544311 111112222222233322221111 0 01110 1 11111111
Q ss_pred hcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcC-CCeEEEecCCCCCCCcCChHHHHHH
Q 015755 186 TLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYS-GARQAYMKTGGEFPFLSRPDEVNLH 264 (401)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~GH~~~~e~p~~v~~~ 264 (401)
.+-+.+ +.....-.......+.||+.++.|++| ..+..+....+.+... ..++.+++ +|||...++.+++.+.
T Consensus 155 PilRAD----~~~~e~Y~~~~~~pl~~pi~~~~G~~D-~~vs~~~~~~W~~~t~~~f~l~~fd-GgHFfl~~~~~~v~~~ 228 (244)
T COG3208 155 PILRAD----FRALESYRYPPPAPLACPIHAFGGEKD-HEVSRDELGAWREHTKGDFTLRVFD-GGHFFLNQQREEVLAR 228 (244)
T ss_pred HHHHHH----HHHhcccccCCCCCcCcceEEeccCcc-hhccHHHHHHHHHhhcCCceEEEec-CcceehhhhHHHHHHH
Confidence 111222 222222222334578999999999999 6888888888887776 57888896 8999999999999999
Q ss_pred HHHHHhh
Q 015755 265 LQLHLRR 271 (401)
Q Consensus 265 i~~fl~~ 271 (401)
|.+.+..
T Consensus 229 i~~~l~~ 235 (244)
T COG3208 229 LEQHLAH 235 (244)
T ss_pred HHHHhhh
Confidence 9998863
No 66
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.67 E-value=9.8e-15 Score=127.82 Aligned_cols=102 Identities=24% Similarity=0.299 Sum_probs=88.6
Q ss_pred EEEEEcCCCCCC--cEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC----------ChHHHHHHHHHHHHHhCC
Q 015755 30 WRYYDFGPKVVP--PLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW----------NHHEWIQAFEKFLDAIDV 97 (401)
Q Consensus 30 l~y~~~G~~~~p--~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~----------s~~~~a~dl~~~l~~l~~ 97 (401)
-.|.+..+...| +||-+||.+|++.+|..+.+.|.+.|.|+|.+++||++ +-++-..-+.++++.+++
T Consensus 23 a~y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i 102 (297)
T PF06342_consen 23 AVYEDSLPSGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGI 102 (297)
T ss_pred EEEEecCCCCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCC
Confidence 346666554333 89999999999999999999999999999999999973 567788889999999998
Q ss_pred c-eEEEEEEchhHHHHHHHHHhCCcccceEEEecCCC
Q 015755 98 H-HIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFL 133 (401)
Q Consensus 98 ~-~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~ 133 (401)
+ +++.+|||.|+-.|+.+|..+| +.|++|++|..
T Consensus 103 ~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G 137 (297)
T PF06342_consen 103 KGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPG 137 (297)
T ss_pred CCceEEEEeccchHHHHHHHhcCc--cceEEEecCCc
Confidence 6 6788999999999999999996 67999999864
No 67
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.65 E-value=2.6e-15 Score=135.10 Aligned_cols=97 Identities=22% Similarity=0.257 Sum_probs=80.5
Q ss_pred CCcEEEeCCCCCC----hHHHHHHHHHHhhCCcEEEEecCCCCCC---------hHHHHHHHHHH---HHHhCCceEEEE
Q 015755 40 VPPLICLPGTAGT----AEVYYKQIMALSMKGYRVISVDIPRVWN---------HHEWIQAFEKF---LDAIDVHHIHLY 103 (401)
Q Consensus 40 ~p~vvllHG~~~~----~~~~~~~~~~L~~~g~~Vi~~D~pG~~s---------~~~~a~dl~~~---l~~l~~~~v~lv 103 (401)
.++|||+||++.. ...|..+++.|.++||+|+++|+||||. .+.+++|+..+ +++.+.++++++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~~~~~v~Lv 104 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQGHPPVTLW 104 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 4689999999864 3467778899988899999999999963 34677777664 444567899999
Q ss_pred EEchhHHHHHHHHHhCCcccceEEEecCCCCCh
Q 015755 104 GTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTH 136 (401)
Q Consensus 104 GhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~ 136 (401)
||||||.+++.+|.++|+.+.++|+++|.....
T Consensus 105 G~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~ 137 (266)
T TIGR03101 105 GLRLGALLALDAANPLAAKCNRLVLWQPVVSGK 137 (266)
T ss_pred EECHHHHHHHHHHHhCccccceEEEeccccchH
Confidence 999999999999999999999999999875543
No 68
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.65 E-value=1.3e-14 Score=125.47 Aligned_cols=182 Identities=19% Similarity=0.163 Sum_probs=129.0
Q ss_pred CCcEEEeCCCCCChHHHHHHHHHHhh-CCcEEEEecCCCCCCh------HHHHHHHHHHHHH----hC-CceEEEEEEch
Q 015755 40 VPPLICLPGTAGTAEVYYKQIMALSM-KGYRVISVDIPRVWNH------HEWIQAFEKFLDA----ID-VHHIHLYGTSL 107 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~~~~~~~~L~~-~g~~Vi~~D~pG~~s~------~~~a~dl~~~l~~----l~-~~~v~lvGhS~ 107 (401)
.++|++.||...+......++..|.. -+++++.+|+.|+|.. ....+|+.++.+. .| .++++|+|+|+
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g~~~~Iil~G~Si 139 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYGSPERIILYGQSI 139 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHHHHHHhhcCCCceEEEEEecC
Confidence 48999999997777665566666653 2799999999999632 2344455444433 33 57899999999
Q ss_pred hHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCCCCCCCchhhhHHHHHHhhhhc
Q 015755 108 GGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHDGPHEPFIADSVDFVVCQVETL 187 (401)
Q Consensus 108 Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (401)
|+..++.+|.++| +.++||.+|+.......... ..... ..+.+ ..
T Consensus 140 Gt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~~~--~~~~~--------------------------~~d~f----~~- 184 (258)
T KOG1552|consen 140 GTVPTVDLASRYP--LAAVVLHSPFTSGMRVAFPD--TKTTY--------------------------CFDAF----PN- 184 (258)
T ss_pred CchhhhhHhhcCC--cceEEEeccchhhhhhhccC--cceEE--------------------------eeccc----cc-
Confidence 9999999999998 99999999975432111000 00000 00000 00
Q ss_pred CHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCC-eEEEecCCCCCCCcCChHHHHHHHH
Q 015755 188 SREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGA-RQAYMKTGGEFPFLSRPDEVNLHLQ 266 (401)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~-~~~~i~~~GH~~~~e~p~~v~~~i~ 266 (401)
......++||+|+++|++| .+++.....++.+..++. +..++.|+||.-. +...++.+.+.
T Consensus 185 ----------------i~kI~~i~~PVLiiHgtdD-evv~~sHg~~Lye~~k~~~epl~v~g~gH~~~-~~~~~yi~~l~ 246 (258)
T KOG1552|consen 185 ----------------IEKISKITCPVLIIHGTDD-EVVDFSHGKALYERCKEKVEPLWVKGAGHNDI-ELYPEYIEHLR 246 (258)
T ss_pred ----------------cCcceeccCCEEEEecccC-ceecccccHHHHHhccccCCCcEEecCCCccc-ccCHHHHHHHH
Confidence 1123347899999999999 589999999999999864 7888999999764 55566889999
Q ss_pred HHHhhccC
Q 015755 267 LHLRRVGV 274 (401)
Q Consensus 267 ~fl~~~~~ 274 (401)
.|+..+..
T Consensus 247 ~f~~~~~~ 254 (258)
T KOG1552|consen 247 RFISSVLP 254 (258)
T ss_pred HHHHHhcc
Confidence 99987653
No 69
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.65 E-value=1.3e-14 Score=131.74 Aligned_cols=247 Identities=16% Similarity=0.144 Sum_probs=153.2
Q ss_pred eeCCeeEEEEEcCCCC---CCcEEEeCCCCCChHHHHH-------HHHHH-------hhCCcEEEEecCCCC--------
Q 015755 24 PIGTKQWRYYDFGPKV---VPPLICLPGTAGTAEVYYK-------QIMAL-------SMKGYRVISVDIPRV-------- 78 (401)
Q Consensus 24 ~~~~~~l~y~~~G~~~---~p~vvllHG~~~~~~~~~~-------~~~~L-------~~~g~~Vi~~D~pG~-------- 78 (401)
.+.+.++.|+.+|+-+ ..+||++|++.+++..... +.+.+ ....|-||++|..|.
T Consensus 32 ~l~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~ 111 (368)
T COG2021 32 VLSDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPS 111 (368)
T ss_pred cccCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCC
Confidence 3467889999999743 3589999999997654321 33333 334699999999874
Q ss_pred ---------------CChHHHHHHHHHHHHHhCCceEE-EEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhc-
Q 015755 79 ---------------WNHHEWIQAFEKFLDAIDVHHIH-LYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAA- 141 (401)
Q Consensus 79 ---------------~s~~~~a~dl~~~l~~l~~~~v~-lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~- 141 (401)
.++.+++..-..++++||++++. +||-||||+.|+.++..||++|+++|.+++......+.-.
T Consensus 112 s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~ 191 (368)
T COG2021 112 SINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAF 191 (368)
T ss_pred CcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHH
Confidence 25678888888899999999987 8999999999999999999999999999987654332110
Q ss_pred -----------CCcccc--c-ccchhhHHH-------------HHHhhccCCCC-CCCc----hhhhHHHHHHhh-----
Q 015755 142 -----------MPWAPI--V-SWTPSFLLK-------------RYVLTGIHDGP-HEPF----IADSVDFVVCQV----- 184 (401)
Q Consensus 142 -----------~~~~~~--~-~~~~~~~~~-------------~~~~~~~~~~~-~~~~----~~~~~~~~~~~~----- 184 (401)
-.|..- . ...|..-++ ..+...+.... .... ....++.+.+..
T Consensus 192 ~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~ 271 (368)
T COG2021 192 NEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFV 271 (368)
T ss_pred HHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHH
Confidence 011000 0 000000000 00111111100 0000 011111111111
Q ss_pred hhcCHHHHHHHhh--hhcccccc------cccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCe-EEEec-CCCCCCC
Q 015755 185 ETLSREDLASRLT--LTADAASV------GNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGAR-QAYMK-TGGEFPF 254 (401)
Q Consensus 185 ~~~~~~~~~~~~~--~~~~~~~~------~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~-~~~i~-~~GH~~~ 254 (401)
..+....+..... ...+...- ....++.|++++.-+.| .+.|++..+.+.+.++.+. +++++ ..||..+
T Consensus 272 ~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD-~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaF 350 (368)
T COG2021 272 ARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSD-WLFPPELQRALAEALPAAGALREIDSPYGHDAF 350 (368)
T ss_pred hccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEeccc-ccCCHHHHHHHHHhccccCceEEecCCCCchhh
Confidence 1111111111111 00111100 12337789999999999 7999999999999998766 65554 5899999
Q ss_pred cCChHHHHHHHHHHHhh
Q 015755 255 LSRPDEVNLHLQLHLRR 271 (401)
Q Consensus 255 ~e~p~~v~~~i~~fl~~ 271 (401)
+...+.+...|..||+.
T Consensus 351 L~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 351 LVESEAVGPLIRKFLAL 367 (368)
T ss_pred hcchhhhhHHHHHHhhc
Confidence 99889999999999974
No 70
>PRK11460 putative hydrolase; Provisional
Probab=99.64 E-value=1.8e-14 Score=128.28 Aligned_cols=161 Identities=12% Similarity=0.018 Sum_probs=107.8
Q ss_pred CCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCC-----------C-----C-------hHHHHHHHHH----
Q 015755 38 KVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRV-----------W-----N-------HHEWIQAFEK---- 90 (401)
Q Consensus 38 ~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~-----------~-----s-------~~~~a~dl~~---- 90 (401)
+..|+||++||++++...|..++..|...++.+..++.+|. + + +.+..+.+.+
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 93 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRY 93 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHH
Confidence 34679999999999999999999999765444444433332 0 0 1122222222
Q ss_pred HHHHhCC--ceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCCCC
Q 015755 91 FLDAIDV--HHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHDGP 168 (401)
Q Consensus 91 ~l~~l~~--~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (401)
+.+..++ ++++++|||+||.+++.++.++|+.+.++|..++.... .+
T Consensus 94 ~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~---------------~~---------------- 142 (232)
T PRK11460 94 WQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS---------------LP---------------- 142 (232)
T ss_pred HHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc---------------cc----------------
Confidence 2333343 47999999999999999999999888888776552100 00
Q ss_pred CCCchhhhHHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcC----CCeEE
Q 015755 169 HEPFIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYS----GARQA 244 (401)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~----~~~~~ 244 (401)
. .....+|+++++|++| .++|.+..+.+.+.+. +++++
T Consensus 143 -~------------------------------------~~~~~~pvli~hG~~D-~vvp~~~~~~~~~~L~~~g~~~~~~ 184 (232)
T PRK11460 143 -E------------------------------------TAPTATTIHLIHGGED-PVIDVAHAVAAQEALISLGGDVTLD 184 (232)
T ss_pred -c------------------------------------cccCCCcEEEEecCCC-CccCHHHHHHHHHHHHHCCCCeEEE
Confidence 0 0012468999999999 6889888888777663 46788
Q ss_pred EecCCCCCCCcCChHHHHHHHHHHHhh
Q 015755 245 YMKTGGEFPFLSRPDEVNLHLQLHLRR 271 (401)
Q Consensus 245 ~i~~~GH~~~~e~p~~v~~~i~~fl~~ 271 (401)
+++++||.+.. +..+.+.+||..
T Consensus 185 ~~~~~gH~i~~----~~~~~~~~~l~~ 207 (232)
T PRK11460 185 IVEDLGHAIDP----RLMQFALDRLRY 207 (232)
T ss_pred EECCCCCCCCH----HHHHHHHHHHHH
Confidence 89999998853 334444445544
No 71
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.62 E-value=5.5e-14 Score=128.77 Aligned_cols=111 Identities=21% Similarity=0.251 Sum_probs=82.1
Q ss_pred eeCCeeEEEEEcCC-----CCCCcEEEeCCCCCChHHHHHH--HHHHh-hCCcEEEEecC--CCCC--------------
Q 015755 24 PIGTKQWRYYDFGP-----KVVPPLICLPGTAGTAEVYYKQ--IMALS-MKGYRVISVDI--PRVW-------------- 79 (401)
Q Consensus 24 ~~~~~~l~y~~~G~-----~~~p~vvllHG~~~~~~~~~~~--~~~L~-~~g~~Vi~~D~--pG~~-------------- 79 (401)
+.-+..+.|..+-+ ...|+|+++||++++...|... +..++ +.||.|+++|. +|++
T Consensus 21 ~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~ 100 (275)
T TIGR02821 21 ETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGA 100 (275)
T ss_pred cccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCc
Confidence 33455555666543 2368999999999999888542 34454 35899999998 3332
Q ss_pred ---------------C-hHHHHHHHHHHHHH---hCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCC
Q 015755 80 ---------------N-HHEWIQAFEKFLDA---IDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLD 134 (401)
Q Consensus 80 ---------------s-~~~~a~dl~~~l~~---l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~ 134 (401)
. ...+++++..+++. ++.++++++||||||++|+.++.++|+.+.+++++++...
T Consensus 101 ~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 101 GFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVA 174 (275)
T ss_pred cccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccC
Confidence 1 12235677777776 3456899999999999999999999999999999998654
No 72
>PLN02442 S-formylglutathione hydrolase
Probab=99.61 E-value=5.2e-14 Score=129.25 Aligned_cols=108 Identities=19% Similarity=0.277 Sum_probs=77.7
Q ss_pred CeeEEEEEcCC-----CCCCcEEEeCCCCCChHHHHHH---HHHHhhCCcEEEEecCCCCC-------------------
Q 015755 27 TKQWRYYDFGP-----KVVPPLICLPGTAGTAEVYYKQ---IMALSMKGYRVISVDIPRVW------------------- 79 (401)
Q Consensus 27 ~~~l~y~~~G~-----~~~p~vvllHG~~~~~~~~~~~---~~~L~~~g~~Vi~~D~pG~~------------------- 79 (401)
+..+.|..+=+ ...|+|+|+||++++...|... ...+...|+.|+.+|..+++
T Consensus 29 ~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~ 108 (283)
T PLN02442 29 GCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFY 108 (283)
T ss_pred CCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCccee
Confidence 44555555422 2468999999999998877443 34556579999999975332
Q ss_pred -----------C-----hHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCC
Q 015755 80 -----------N-----HHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLD 134 (401)
Q Consensus 80 -----------s-----~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~ 134 (401)
. .+++.+.+....+.++.++++++||||||+.|+.++.++|+++.+++.+++...
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 109 LNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred eccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccC
Confidence 0 122223333444445778899999999999999999999999999999998654
No 73
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.60 E-value=9.9e-14 Score=115.73 Aligned_cols=213 Identities=12% Similarity=0.062 Sum_probs=141.3
Q ss_pred CCCCCcEEEeCCCCCChH--HHHHHHHHHhhCCcEEEEecCCCCC---------ChHHHHHHHHHHHHHhCCc-e--EEE
Q 015755 37 PKVVPPLICLPGTAGTAE--VYYKQIMALSMKGYRVISVDIPRVW---------NHHEWIQAFEKFLDAIDVH-H--IHL 102 (401)
Q Consensus 37 ~~~~p~vvllHG~~~~~~--~~~~~~~~L~~~g~~Vi~~D~pG~~---------s~~~~a~dl~~~l~~l~~~-~--v~l 102 (401)
+++...+|++||+-.+.. ....++..|.+.|+.++.+|++|.| .....|+|+..+++.+... + -++
T Consensus 30 tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~vi 109 (269)
T KOG4667|consen 30 TGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVPVI 109 (269)
T ss_pred cCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCceEEEEE
Confidence 345679999999988764 4566778888889999999999964 3456789999999998543 2 357
Q ss_pred EEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCCCCCCCchhhhHHHHHH
Q 015755 103 YGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHDGPHEPFIADSVDFVVC 182 (401)
Q Consensus 103 vGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (401)
+|||-||.+++.+|.++++ +.-+|.+++-........ .......+.+....++.....+.-.
T Consensus 110 ~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~--------eRlg~~~l~~ike~Gfid~~~rkG~--------- 171 (269)
T KOG4667|consen 110 LGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGIN--------ERLGEDYLERIKEQGFIDVGPRKGK--------- 171 (269)
T ss_pred EeecCccHHHHHHHHhhcC-chheEEcccccchhcchh--------hhhcccHHHHHHhCCceecCcccCC---------
Confidence 9999999999999999987 777777776443322210 0011112222222232222110000
Q ss_pred hhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEEEecCCCCCCCcCChHHHH
Q 015755 183 QVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFLSRPDEVN 262 (401)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~v~ 262 (401)
....+..+.+..++......... .+...||+|-++|..| .++|.+.+..+++.+|+.++.+++|+.|.....+ .+++
T Consensus 172 y~~rvt~eSlmdrLntd~h~acl-kId~~C~VLTvhGs~D-~IVPve~AkefAk~i~nH~L~iIEgADHnyt~~q-~~l~ 248 (269)
T KOG4667|consen 172 YGYRVTEESLMDRLNTDIHEACL-KIDKQCRVLTVHGSED-EIVPVEDAKEFAKIIPNHKLEIIEGADHNYTGHQ-SQLV 248 (269)
T ss_pred cCceecHHHHHHHHhchhhhhhc-CcCccCceEEEeccCC-ceeechhHHHHHHhccCCceEEecCCCcCccchh-hhHh
Confidence 00122233333344332222222 3567899999999999 7999999999999999999999999999875443 4455
Q ss_pred HHHHHHHh
Q 015755 263 LHLQLHLR 270 (401)
Q Consensus 263 ~~i~~fl~ 270 (401)
.....|..
T Consensus 249 ~lgl~f~k 256 (269)
T KOG4667|consen 249 SLGLEFIK 256 (269)
T ss_pred hhcceeEE
Confidence 55555544
No 74
>PLN00021 chlorophyllase
Probab=99.59 E-value=6.2e-14 Score=129.66 Aligned_cols=95 Identities=19% Similarity=0.268 Sum_probs=73.8
Q ss_pred CCCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCCC------hHHHHHHHHHHHHH-----------hCCce
Q 015755 37 PKVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWN------HHEWIQAFEKFLDA-----------IDVHH 99 (401)
Q Consensus 37 ~~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~s------~~~~a~dl~~~l~~-----------l~~~~ 99 (401)
.+..|+|||+||++.+...|..++..|+++||.|+++|++|+.. +++ ++++..++.. .+.++
T Consensus 49 ~g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~i~d-~~~~~~~l~~~l~~~l~~~~~~d~~~ 127 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTDEIKD-AAAVINWLSSGLAAVLPEGVRPDLSK 127 (313)
T ss_pred CCCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchhhHHH-HHHHHHHHHhhhhhhcccccccChhh
Confidence 34568999999999999999999999998899999999998531 122 2222222221 23367
Q ss_pred EEEEEEchhHHHHHHHHHhCCc-----ccceEEEecCC
Q 015755 100 IHLYGTSLGGFLAQLFAQHRPR-----RVRSLVLSNTF 132 (401)
Q Consensus 100 v~lvGhS~Gg~ia~~~A~~~P~-----~V~~lvli~~~ 132 (401)
++++||||||.+|+.+|.++++ +|.++|+++|.
T Consensus 128 v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 128 LALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred eEEEEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 9999999999999999999875 57899999885
No 75
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.58 E-value=1.1e-13 Score=121.89 Aligned_cols=183 Identities=15% Similarity=0.141 Sum_probs=111.7
Q ss_pred HHHHHHHHhhCCcEEEEecCCCCCCh-------------HHHHHHHHHHHHHh------CCceEEEEEEchhHHHHHHHH
Q 015755 56 YYKQIMALSMKGYRVISVDIPRVWNH-------------HEWIQAFEKFLDAI------DVHHIHLYGTSLGGFLAQLFA 116 (401)
Q Consensus 56 ~~~~~~~L~~~g~~Vi~~D~pG~~s~-------------~~~a~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~A 116 (401)
|......|+++||.|+.+|+||.+.. ...++|+...++.+ ..+++.++|+|+||++++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 44556788889999999999996421 23345555555443 235899999999999999999
Q ss_pred HhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCCCCCCCchhhhHHHHHHhhhhcCHHHHHHHh
Q 015755 117 QHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRL 196 (401)
Q Consensus 117 ~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (401)
.++|++++++|..++..+.......... +.......... .......+....
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~~---------~~~~~~~~~~~--------------------~~~~~~~~~~~s 133 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTDI---------YTKAEYLEYGD--------------------PWDNPEFYRELS 133 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTCC---------HHHGHHHHHSS--------------------TTTSHHHHHHHH
T ss_pred cccceeeeeeeccceecchhcccccccc---------cccccccccCc--------------------cchhhhhhhhhc
Confidence 9999999999999986554322111100 00000000000 000111111111
Q ss_pred hhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHc----CCCeEEEecCCCCCCC-cCChHHHHHHHHHHHhh
Q 015755 197 TLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERY----SGARQAYMKTGGEFPF-LSRPDEVNLHLQLHLRR 271 (401)
Q Consensus 197 ~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~----~~~~~~~i~~~GH~~~-~e~p~~v~~~i~~fl~~ 271 (401)
.. .......+.+|+|+++|++| ..+|......+.+.+ ...+++++|++||.+. .+...++.+.+.+|+++
T Consensus 134 ~~----~~~~~~~~~~P~li~hG~~D-~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 134 PI----SPADNVQIKPPVLIIHGEND-PRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDK 208 (213)
T ss_dssp HG----GGGGGCGGGSEEEEEEETTB-SSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHH
T ss_pred cc----cccccccCCCCEEEEccCCC-CccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHH
Confidence 11 11111116789999999999 578888777776655 3478999999999554 34456778889999986
Q ss_pred c
Q 015755 272 V 272 (401)
Q Consensus 272 ~ 272 (401)
.
T Consensus 209 ~ 209 (213)
T PF00326_consen 209 Y 209 (213)
T ss_dssp H
T ss_pred H
Confidence 5
No 76
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.56 E-value=6e-13 Score=119.11 Aligned_cols=232 Identities=16% Similarity=0.186 Sum_probs=125.3
Q ss_pred CCCCcEEEeCCCCCChH-HH-HHHHHHHhhCCcEEEEecCCCCCC---------hHHHHHHHHHHHHH----hCCceEEE
Q 015755 38 KVVPPLICLPGTAGTAE-VY-YKQIMALSMKGYRVISVDIPRVWN---------HHEWIQAFEKFLDA----IDVHHIHL 102 (401)
Q Consensus 38 ~~~p~vvllHG~~~~~~-~~-~~~~~~L~~~g~~Vi~~D~pG~~s---------~~~~a~dl~~~l~~----l~~~~v~l 102 (401)
...|.||++||+.|+.. .| ..+...+.++||.|+++++|||.. ...+.+|+..+++. ....++..
T Consensus 73 ~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~a 152 (345)
T COG0429 73 AKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYA 152 (345)
T ss_pred cCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEE
Confidence 35689999999988765 34 456678888999999999999842 12233555555544 45568999
Q ss_pred EEEchhHHHHHHHHHhCCc--ccceEEEecCCCCChhHhhcCCcccccccchhhHH---HHHHhhccCCC--CCCCchhh
Q 015755 103 YGTSLGGFLAQLFAQHRPR--RVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLL---KRYVLTGIHDG--PHEPFIAD 175 (401)
Q Consensus 103 vGhS~Gg~ia~~~A~~~P~--~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~ 175 (401)
+|.|+||...+.+..+..+ .+.+.+.++.+.+....................+. .+.....+..- ........
T Consensus 153 vG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~ 232 (345)
T COG0429 153 VGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTVLA 232 (345)
T ss_pred EEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHHHH
Confidence 9999999555555554433 34555555544332211111111111011111111 11111111100 00000000
Q ss_pred hHHHHHH--hhh-hcC-----HHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHH-HcCCCeEEEe
Q 015755 176 SVDFVVC--QVE-TLS-----REDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSE-RYSGARQAYM 246 (401)
Q Consensus 176 ~~~~~~~--~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~-~~~~~~~~~i 246 (401)
..+.+.. .+. .+. -.+...++........+ ..|.+|+|+|+..+| ++++++....... ..|++.+..-
T Consensus 233 ~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L--~~Ir~PtLii~A~DD-P~~~~~~iP~~~~~~np~v~l~~t 309 (345)
T COG0429 233 AIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLL--PKIRKPTLIINAKDD-PFMPPEVIPKLQEMLNPNVLLQLT 309 (345)
T ss_pred HHHhhchHHhccceeeecccCCCcHHHHHHhccccccc--cccccceEEEecCCC-CCCChhhCCcchhcCCCceEEEee
Confidence 0000000 000 000 01112222222222222 237789999999999 6888877666655 6688999999
Q ss_pred cCCCCCCCcC----ChH-HHHHHHHHHHhhc
Q 015755 247 KTGGEFPFLS----RPD-EVNLHLQLHLRRV 272 (401)
Q Consensus 247 ~~~GH~~~~e----~p~-~v~~~i~~fl~~~ 272 (401)
+.+||..++. +|. ...+.+.+|++..
T Consensus 310 ~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 310 EHGGHVGFLGGKLLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred cCCceEEeccCccccchhhHHHHHHHHHHHH
Confidence 9999988877 443 4557788887653
No 77
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.53 E-value=7.5e-14 Score=116.44 Aligned_cols=207 Identities=19% Similarity=0.167 Sum_probs=140.3
Q ss_pred CCeeEEEEE-cCCCCCCcEEEeCCCCCChHHHHHHHHHH-hhCCcEEEEecCCCCCCh------HHHHHHHHHHHHHh--
Q 015755 26 GTKQWRYYD-FGPKVVPPLICLPGTAGTAEVYYKQIMAL-SMKGYRVISVDIPRVWNH------HEWIQAFEKFLDAI-- 95 (401)
Q Consensus 26 ~~~~l~y~~-~G~~~~p~vvllHG~~~~~~~~~~~~~~L-~~~g~~Vi~~D~pG~~s~------~~~a~dl~~~l~~l-- 95 (401)
|..+++-+. ....+.|+++++|+..++....-+.+.-+ ..-+.+|+.+++||||.. +.+.-|-.++++.+
T Consensus 63 D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL~lDs~avldyl~t 142 (300)
T KOG4391|consen 63 DKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGLKLDSEAVLDYLMT 142 (300)
T ss_pred cceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccccceeccHHHHHHHHhc
Confidence 555554433 33447899999999999988776666543 334799999999999743 33444555555554
Q ss_pred ----CCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCCCCCCC
Q 015755 96 ----DVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHDGPHEP 171 (401)
Q Consensus 96 ----~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (401)
.-.+++++|.|+||.+|+.+|+++.+++.++|+-+++...+........ +
T Consensus 143 ~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~--------------------------p 196 (300)
T KOG4391|consen 143 RPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVF--------------------------P 196 (300)
T ss_pred CccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheec--------------------------c
Confidence 3358999999999999999999999999999999998665432111000 0
Q ss_pred chhhhHHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcC--CCeEEEecCC
Q 015755 172 FIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYS--GARQAYMKTG 249 (401)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~--~~~~~~i~~~ 249 (401)
+.......+. .+...... .. ......|.|+|.|.+| .++|+-..+.+.+..| +.++..+|+|
T Consensus 197 ~~~k~i~~lc-------~kn~~~S~------~k--i~~~~~P~LFiSGlkD-elVPP~~Mr~Ly~~c~S~~Krl~eFP~g 260 (300)
T KOG4391|consen 197 FPMKYIPLLC-------YKNKWLSY------RK--IGQCRMPFLFISGLKD-ELVPPVMMRQLYELCPSRTKRLAEFPDG 260 (300)
T ss_pred chhhHHHHHH-------HHhhhcch------hh--hccccCceEEeecCcc-ccCCcHHHHHHHHhCchhhhhheeCCCC
Confidence 0000000000 00000000 00 1135678999999999 6899999999999986 4689999999
Q ss_pred CCCCCcCChHHHHHHHHHHHhhccCC
Q 015755 250 GEFPFLSRPDEVNLHLQLHLRRVGVE 275 (401)
Q Consensus 250 GH~~~~e~p~~v~~~i~~fl~~~~~~ 275 (401)
.|.--.-. +-..++|.+||.+....
T Consensus 261 tHNDT~i~-dGYfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 261 THNDTWIC-DGYFQAIEDFLAEVVKS 285 (300)
T ss_pred ccCceEEe-ccHHHHHHHHHHHhccC
Confidence 99654332 55789999999988654
No 78
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.51 E-value=2.3e-13 Score=114.49 Aligned_cols=156 Identities=24% Similarity=0.283 Sum_probs=104.5
Q ss_pred EEEeCCCCCChH-HHHHHHH-HHhhCCcEEEEecCCCCCChHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHH-HhC
Q 015755 43 LICLPGTAGTAE-VYYKQIM-ALSMKGYRVISVDIPRVWNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFA-QHR 119 (401)
Q Consensus 43 vvllHG~~~~~~-~~~~~~~-~L~~~g~~Vi~~D~pG~~s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A-~~~ 119 (401)
|+++||++++.. .|.+.+. .|. ..++|-.+++ -..+.+++.+.+.+.+..+. ++++|||||+|+..+++++ ...
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~-~~~~V~~~~~-~~P~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc~~~l~~l~~~~ 77 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLE-NSVRVEQPDW-DNPDLDEWVQALDQAIDAID-EPTILVAHSLGCLTALRWLAEQS 77 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHT-TSEEEEEC---TS--HHHHHHHHHHCCHC-T-TTEEEEEETHHHHHHHHHHHHTC
T ss_pred CEEeCCCCCCCccHHHHHHHHhCC-CCeEEecccc-CCCCHHHHHHHHHHHHhhcC-CCeEEEEeCHHHHHHHHHHhhcc
Confidence 689999999864 7888775 454 3477777777 56788999999988888763 5699999999999999999 777
Q ss_pred CcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCCCCCCCchhhhHHHHHHhhhhcCHHHHHHHhhhh
Q 015755 120 PRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTLT 199 (401)
Q Consensus 120 P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (401)
..+|.|++|++|+-...... ... . +
T Consensus 78 ~~~v~g~lLVAp~~~~~~~~-~~~----------------------------~-----------------------~--- 102 (171)
T PF06821_consen 78 QKKVAGALLVAPFDPDDPEP-FPP----------------------------E-----------------------L--- 102 (171)
T ss_dssp CSSEEEEEEES--SCGCHHC-CTC----------------------------G-----------------------G---
T ss_pred cccccEEEEEcCCCcccccc-hhh----------------------------h-----------------------c---
Confidence 88999999999963310000 000 0 0
Q ss_pred cccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEEEecCCCCCCCcCCh
Q 015755 200 ADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFLSRP 258 (401)
Q Consensus 200 ~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p 258 (401)
......+...++.|.++|.+++| .++|.+.++.+++.+ +++++.++++||+.-.+.-
T Consensus 103 ~~f~~~p~~~l~~~~~viaS~nD-p~vp~~~a~~~A~~l-~a~~~~~~~~GHf~~~~G~ 159 (171)
T PF06821_consen 103 DGFTPLPRDPLPFPSIVIASDND-PYVPFERAQRLAQRL-GAELIILGGGGHFNAASGF 159 (171)
T ss_dssp CCCTTSHCCHHHCCEEEEEETTB-SSS-HHHHHHHHHHH-T-EEEEETS-TTSSGGGTH
T ss_pred cccccCcccccCCCeEEEEcCCC-CccCHHHHHHHHHHc-CCCeEECCCCCCcccccCC
Confidence 00000111123456789999999 699999999999998 8999999999998765443
No 79
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.50 E-value=1.1e-12 Score=133.08 Aligned_cols=210 Identities=16% Similarity=0.183 Sum_probs=131.2
Q ss_pred CCeeEEEEEcCCC--C----CCcEEEeCCCCCChHH--HHHHHHHHhhCCcEEEEecCCCCC-----------------C
Q 015755 26 GTKQWRYYDFGPK--V----VPPLICLPGTAGTAEV--YYKQIMALSMKGYRVISVDIPRVW-----------------N 80 (401)
Q Consensus 26 ~~~~l~y~~~G~~--~----~p~vvllHG~~~~~~~--~~~~~~~L~~~g~~Vi~~D~pG~~-----------------s 80 (401)
+|.+++....-+. + -|+||++||.+..... |...+..|+.+||.|+.+++||.. .
T Consensus 374 dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~ 453 (620)
T COG1506 374 DGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVD 453 (620)
T ss_pred CCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCcc
Confidence 6768877776552 1 1789999999865543 666778888899999999999752 2
Q ss_pred hHHHHHHHHHHHHHhCC---ceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHH
Q 015755 81 HHEWIQAFEKFLDAIDV---HHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLK 157 (401)
Q Consensus 81 ~~~~a~dl~~~l~~l~~---~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (401)
.+++.+.+. ++.+.+. +++.++|||+||++++..+.+.| .+++.+.+.+............ ..+..
T Consensus 454 ~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~~--------~~~~~- 522 (620)
T COG1506 454 LEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGEST--------EGLRF- 522 (620)
T ss_pred HHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccccc--------hhhcC-
Confidence 344444444 4444433 48999999999999999999988 6777666655332111000000 00000
Q ss_pred HHHhhccCCCCCCCchhhhHHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHH
Q 015755 158 RYVLTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSER 237 (401)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~ 237 (401)
......... .. ..+.+.... +......+++|+|+|||++|+ .++.+.++.+.+.
T Consensus 523 --~~~~~~~~~----------------~~-~~~~~~~~s------p~~~~~~i~~P~LliHG~~D~-~v~~~q~~~~~~a 576 (620)
T COG1506 523 --DPEENGGGP----------------PE-DREKYEDRS------PIFYADNIKTPLLLIHGEEDD-RVPIEQAEQLVDA 576 (620)
T ss_pred --CHHHhCCCc----------------cc-ChHHHHhcC------hhhhhcccCCCEEEEeecCCc-cCChHHHHHHHHH
Confidence 000000000 00 111111111 111233478999999999994 7788888777776
Q ss_pred cC----CCeEEEecCCCCCCCc-CChHHHHHHHHHHHhhc
Q 015755 238 YS----GARQAYMKTGGEFPFL-SRPDEVNLHLQLHLRRV 272 (401)
Q Consensus 238 ~~----~~~~~~i~~~GH~~~~-e~p~~v~~~i~~fl~~~ 272 (401)
+. .++++++|+.||.+-- ++-..+.+.+.+|+++.
T Consensus 577 L~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~ 616 (620)
T COG1506 577 LKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRH 616 (620)
T ss_pred HHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHH
Confidence 63 4789999999997755 44566777788888764
No 80
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.48 E-value=1.9e-12 Score=114.27 Aligned_cols=166 Identities=20% Similarity=0.219 Sum_probs=103.6
Q ss_pred CCCCcEEEeCCCCCChHHHHHHHH-HHhhCCcEEEEecCC--------CC-----C-----------C---hHHHHHHHH
Q 015755 38 KVVPPLICLPGTAGTAEVYYKQIM-ALSMKGYRVISVDIP--------RV-----W-----------N---HHEWIQAFE 89 (401)
Q Consensus 38 ~~~p~vvllHG~~~~~~~~~~~~~-~L~~~g~~Vi~~D~p--------G~-----~-----------s---~~~~a~dl~ 89 (401)
+..+.||++||+|.+...|..... .+...+..++.+..| |. + + ++..++.+.
T Consensus 12 ~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~ 91 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLD 91 (216)
T ss_dssp T-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHH
T ss_pred CCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHH
Confidence 456899999999999977766555 233346778887764 22 0 1 122333444
Q ss_pred HHHHHh-----CCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhcc
Q 015755 90 KFLDAI-----DVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGI 164 (401)
Q Consensus 90 ~~l~~l-----~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (401)
++++.. ..++++|+|+|.||++|+.++.++|+.+.++|.+++........
T Consensus 92 ~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~------------------------- 146 (216)
T PF02230_consen 92 ELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL------------------------- 146 (216)
T ss_dssp HHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC-------------------------
T ss_pred HHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc-------------------------
Confidence 555432 33589999999999999999999999999999999853321000
Q ss_pred CCCCCCCchhhhHHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcC----C
Q 015755 165 HDGPHEPFIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYS----G 240 (401)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~----~ 240 (401)
. ..... .-..|+++++|.+| .++|.+..+...+.+. +
T Consensus 147 --------------------------------~-----~~~~~-~~~~pi~~~hG~~D-~vvp~~~~~~~~~~L~~~~~~ 187 (216)
T PF02230_consen 147 --------------------------------E-----DRPEA-LAKTPILIIHGDED-PVVPFEWAEKTAEFLKAAGAN 187 (216)
T ss_dssp --------------------------------H-----CCHCC-CCTS-EEEEEETT--SSSTHHHHHHHHHHHHCTT-G
T ss_pred --------------------------------c-----ccccc-cCCCcEEEEecCCC-CcccHHHHHHHHHHHHhcCCC
Confidence 0 00000 01568999999999 5889888877777663 4
Q ss_pred CeEEEecCCCCCCCcCChHHHHHHHHHHHhh
Q 015755 241 ARQAYMKTGGEFPFLSRPDEVNLHLQLHLRR 271 (401)
Q Consensus 241 ~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~~ 271 (401)
.++..++++||... .+..+.+.+||++
T Consensus 188 v~~~~~~g~gH~i~----~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 188 VEFHEYPGGGHEIS----PEELRDLREFLEK 214 (216)
T ss_dssp EEEEEETT-SSS------HHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCCCC----HHHHHHHHHHHhh
Confidence 68899999999763 5566678888875
No 81
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.47 E-value=5.6e-13 Score=127.07 Aligned_cols=95 Identities=21% Similarity=0.194 Sum_probs=75.8
Q ss_pred CCCcEEEeCCCCCCh--HHHHH-HHHHHhh--CCcEEEEecCCCCCC---------hHHHHHHHHHHHHHh------CCc
Q 015755 39 VVPPLICLPGTAGTA--EVYYK-QIMALSM--KGYRVISVDIPRVWN---------HHEWIQAFEKFLDAI------DVH 98 (401)
Q Consensus 39 ~~p~vvllHG~~~~~--~~~~~-~~~~L~~--~g~~Vi~~D~pG~~s---------~~~~a~dl~~~l~~l------~~~ 98 (401)
++|++|++||++.+. ..|.. +...|.. .+|+||++|++|++. ...+++++.++++.+ +++
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~ 119 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWD 119 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 579999999998754 45765 4555532 269999999999852 245566777777654 367
Q ss_pred eEEEEEEchhHHHHHHHHHhCCcccceEEEecCCC
Q 015755 99 HIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFL 133 (401)
Q Consensus 99 ~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~ 133 (401)
+++||||||||.+|..++.++|++|.++++++|..
T Consensus 120 ~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAg 154 (442)
T TIGR03230 120 NVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAG 154 (442)
T ss_pred cEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCC
Confidence 99999999999999999999999999999999954
No 82
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.45 E-value=2.2e-12 Score=114.98 Aligned_cols=94 Identities=26% Similarity=0.326 Sum_probs=80.1
Q ss_pred CcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC-------ChHHHHHHHHHHHHHhCCc-eEEEEEEchhHHHH
Q 015755 41 PPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW-------NHHEWIQAFEKFLDAIDVH-HIHLYGTSLGGFLA 112 (401)
Q Consensus 41 p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~-------s~~~~a~dl~~~l~~l~~~-~v~lvGhS~Gg~ia 112 (401)
++|+|+|+.+++...|.++++.|....+.|+.+++||.. +++++++...+.|.....+ +++|+|||+||.+|
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~lA 80 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGGILA 80 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHHHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccHHHH
Confidence 379999999999999999999998323999999999984 8899999988888776665 99999999999999
Q ss_pred HHHHHhC---CcccceEEEecCCCC
Q 015755 113 QLFAQHR---PRRVRSLVLSNTFLD 134 (401)
Q Consensus 113 ~~~A~~~---P~~V~~lvli~~~~~ 134 (401)
.++|.+- ...|..|+++++.++
T Consensus 81 ~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 81 FEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp HHHHHHHHHTT-SESEEEEESCSST
T ss_pred HHHHHHHHHhhhccCceEEecCCCC
Confidence 9999863 456999999997544
No 83
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.45 E-value=5e-13 Score=121.89 Aligned_cols=106 Identities=23% Similarity=0.310 Sum_probs=80.0
Q ss_pred CeeEEEEEcCCCCCCcEEEeCCCCCCh-HHHHHHH-HHHh-hCCcEEEEecCCCCC---------ChHHHHHHHHHHHHH
Q 015755 27 TKQWRYYDFGPKVVPPLICLPGTAGTA-EVYYKQI-MALS-MKGYRVISVDIPRVW---------NHHEWIQAFEKFLDA 94 (401)
Q Consensus 27 ~~~l~y~~~G~~~~p~vvllHG~~~~~-~~~~~~~-~~L~-~~g~~Vi~~D~pG~~---------s~~~~a~dl~~~l~~ 94 (401)
...+.+....+ ++|++|++||++++. ..|...+ ..+. ..+|+|+++|++++. +.+.+++++..+++.
T Consensus 24 ~~~~~~~~f~~-~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~ 102 (275)
T cd00707 24 PSSLKNSNFNP-SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDF 102 (275)
T ss_pred hhhhhhcCCCC-CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHH
Confidence 34455555554 478999999999988 5676544 4443 357999999999873 233445555555554
Q ss_pred h------CCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCC
Q 015755 95 I------DVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFL 133 (401)
Q Consensus 95 l------~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~ 133 (401)
+ +.+++++|||||||.+|..++.++|++|.++++++|..
T Consensus 103 L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~ 147 (275)
T cd00707 103 LVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAG 147 (275)
T ss_pred HHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCc
Confidence 3 44689999999999999999999999999999999853
No 84
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.45 E-value=1.6e-12 Score=114.45 Aligned_cols=95 Identities=13% Similarity=0.181 Sum_probs=70.3
Q ss_pred CCCcEEEeCCCCCChHHHH---HHHHHHhhCCcEEEEecCCCCCCh---------------HHHHHHHHHHH----HHhC
Q 015755 39 VVPPLICLPGTAGTAEVYY---KQIMALSMKGYRVISVDIPRVWNH---------------HEWIQAFEKFL----DAID 96 (401)
Q Consensus 39 ~~p~vvllHG~~~~~~~~~---~~~~~L~~~g~~Vi~~D~pG~~s~---------------~~~a~dl~~~l----~~l~ 96 (401)
..|.||++||.+++...+. .+...+.+.||.|+++|++|++.. .....++..++ +..+
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 4689999999999888775 234444446999999999986310 01223333333 3333
Q ss_pred C--ceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCC
Q 015755 97 V--HHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFL 133 (401)
Q Consensus 97 ~--~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~ 133 (401)
+ ++++|+|||+||.+++.++.++|+.+.+++.+++..
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 3 489999999999999999999999999999888753
No 85
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.44 E-value=2.6e-11 Score=112.70 Aligned_cols=251 Identities=12% Similarity=0.084 Sum_probs=133.6
Q ss_pred CceEEEee-CCeeEEEEEc--C-------CCCCCcEEEeCCCCCChH-HH-HHHHHHHhhCCcEEEEecCCCCC------
Q 015755 18 VPLHKIPI-GTKQWRYYDF--G-------PKVVPPLICLPGTAGTAE-VY-YKQIMALSMKGYRVISVDIPRVW------ 79 (401)
Q Consensus 18 ~~~~~~~~-~~~~l~y~~~--G-------~~~~p~vvllHG~~~~~~-~~-~~~~~~L~~~g~~Vi~~D~pG~~------ 79 (401)
+....+++ ||+.+.+--. + ..+.|.||++||+.+++. .| +.++..+.++||+|++++.||++
T Consensus 93 y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtT 172 (409)
T KOG1838|consen 93 YTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTT 172 (409)
T ss_pred ceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCC
Confidence 44555666 5665554322 1 124589999999988665 44 44566677789999999999974
Q ss_pred -------ChHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCc---ccceEEEecCCCCChhHhhcCCcccccc
Q 015755 80 -------NHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPR---RVRSLVLSNTFLDTHSFAAAMPWAPIVS 149 (401)
Q Consensus 80 -------s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~---~V~~lvli~~~~~~~~~~~~~~~~~~~~ 149 (401)
..+|+.+.+..+-+.+...+...+|.||||++...|..+..+ .+.++.+++|+-.. .......+.....
T Consensus 173 pr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~-~~~~~~~~~~~~~ 251 (409)
T KOG1838|consen 173 PRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLL-AASRSIETPLYRR 251 (409)
T ss_pred CceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhh-hhhhHHhcccchH
Confidence 334444444444455556689999999999999999987543 45566666664221 0011111111111
Q ss_pred cchhhHHHHH---Hhhc----cCCCCC--CCchhhhHHHHHHhhhh--cCHHHHHHHhhhhcccccccccccCCcEEEEE
Q 015755 150 WTPSFLLKRY---VLTG----IHDGPH--EPFIADSVDFVVCQVET--LSREDLASRLTLTADAASVGNLLLSDSHITIM 218 (401)
Q Consensus 150 ~~~~~~~~~~---~~~~----~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~ 218 (401)
.....+...+ +... +..... .......++.+...... ..-+....++........ ...+.+|+|+|.
T Consensus 252 ~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~--v~~I~VP~L~in 329 (409)
T KOG1838|consen 252 FYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNY--VDKIKVPLLCIN 329 (409)
T ss_pred HHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhh--cccccccEEEEe
Confidence 1111110000 0000 000000 00000111111111100 000112222222222222 233778899999
Q ss_pred eCCCCCCCcHH-HHHHHHHHcCCCeEEEecCCCCCCCcCC----hHHHHHH-HHHHHhhc
Q 015755 219 DTNDYCATSQQ-LKDQLSERYSGARQAYMKTGGEFPFLSR----PDEVNLH-LQLHLRRV 272 (401)
Q Consensus 219 G~~D~~~~~~~-~~~~~~~~~~~~~~~~i~~~GH~~~~e~----p~~v~~~-i~~fl~~~ 272 (401)
..+| +++|+. .-.......|+.-+++-..+||..++|. +....+. +.+|+...
T Consensus 330 a~DD-Pv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~ 388 (409)
T KOG1838|consen 330 AADD-PVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNA 388 (409)
T ss_pred cCCC-CCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHH
Confidence 9999 577774 3344455667888888889999998886 2233333 66776654
No 86
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.44 E-value=8e-12 Score=110.47 Aligned_cols=166 Identities=15% Similarity=0.098 Sum_probs=107.1
Q ss_pred CCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCCC--------------------hHHHHHHHHHHHHHh---
Q 015755 39 VVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWN--------------------HHEWIQAFEKFLDAI--- 95 (401)
Q Consensus 39 ~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~s--------------------~~~~a~dl~~~l~~l--- 95 (401)
+.|.||++|++.+-......+++.|+++||.|+++|+.+-.. .+...+++...++.+
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 468999999999988777888999999999999999854311 234456665555554
Q ss_pred C---CceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCCCCCCCc
Q 015755 96 D---VHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHDGPHEPF 172 (401)
Q Consensus 96 ~---~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (401)
. .+++.++|+|+||.+++.+|.+. ..+++.|..-+......
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~~~----------------------------------- 136 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPPPP----------------------------------- 136 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSGGG-----------------------------------
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCCCc-----------------------------------
Confidence 2 35899999999999999999887 57888887766100000
Q ss_pred hhhhHHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHc----CCCeEEEecC
Q 015755 173 IADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERY----SGARQAYMKT 248 (401)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~----~~~~~~~i~~ 248 (401)
. .. ....+++|+++++|++| ..++.+..+.+.+.+ ...++++++|
T Consensus 137 ------------------~-~~-----------~~~~~~~P~l~~~g~~D-~~~~~~~~~~~~~~l~~~~~~~~~~~y~g 185 (218)
T PF01738_consen 137 ------------------P-LE-----------DAPKIKAPVLILFGEND-PFFPPEEVEALEEALKAAGVDVEVHVYPG 185 (218)
T ss_dssp ------------------H-HH-----------HGGG--S-EEEEEETT--TTS-HHHHHHHHHHHHCTTTTEEEEEETT
T ss_pred ------------------c-hh-----------hhcccCCCEeecCccCC-CCCChHHHHHHHHHHHhcCCcEEEEECCC
Confidence 0 00 01135689999999999 678888766666655 4578999999
Q ss_pred CCCCCCcCChH--------HHHHHHHHHHhh
Q 015755 249 GGEFPFLSRPD--------EVNLHLQLHLRR 271 (401)
Q Consensus 249 ~GH~~~~e~p~--------~v~~~i~~fl~~ 271 (401)
++|-+...... +-.+.+.+||++
T Consensus 186 a~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~ 216 (218)
T PF01738_consen 186 AGHGFANPSRPPYDPAAAEDAWQRTLAFFKR 216 (218)
T ss_dssp --TTTTSTTSTT--HHHHHHHHHHHHHHHCC
T ss_pred CcccccCCCCcccCHHHHHHHHHHHHHHHHh
Confidence 99976654322 233556667654
No 87
>PRK10162 acetyl esterase; Provisional
Probab=99.40 E-value=2.9e-11 Score=113.00 Aligned_cols=96 Identities=21% Similarity=0.250 Sum_probs=70.7
Q ss_pred CCCcEEEeCCCC---CChHHHHHHHHHHhh-CCcEEEEecCCCCCC------hHHHHHH---HHHHHHHhCC--ceEEEE
Q 015755 39 VVPPLICLPGTA---GTAEVYYKQIMALSM-KGYRVISVDIPRVWN------HHEWIQA---FEKFLDAIDV--HHIHLY 103 (401)
Q Consensus 39 ~~p~vvllHG~~---~~~~~~~~~~~~L~~-~g~~Vi~~D~pG~~s------~~~~a~d---l~~~l~~l~~--~~v~lv 103 (401)
..|+||++||.+ ++...|..++..|+. .|+.|+++|+|.... +++..+. +.+..+.+++ ++++++
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~ 159 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFA 159 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEE
Confidence 468999999977 566778888888876 489999999987532 2333222 2222334554 489999
Q ss_pred EEchhHHHHHHHHHhC------CcccceEEEecCCCC
Q 015755 104 GTSLGGFLAQLFAQHR------PRRVRSLVLSNTFLD 134 (401)
Q Consensus 104 GhS~Gg~ia~~~A~~~------P~~V~~lvli~~~~~ 134 (401)
|+|+||.+|+.++.+. +..+.++|++.|...
T Consensus 160 G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 160 GDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred EECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 9999999999998753 357899999988654
No 88
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.39 E-value=4.9e-11 Score=115.94 Aligned_cols=97 Identities=18% Similarity=0.340 Sum_probs=81.4
Q ss_pred CCCcEEEeCCCCCChHHH-----HHHHHHHhhCCcEEEEecCCCC------CChHHHHHHHHHHHHHh----CCceEEEE
Q 015755 39 VVPPLICLPGTAGTAEVY-----YKQIMALSMKGYRVISVDIPRV------WNHHEWIQAFEKFLDAI----DVHHIHLY 103 (401)
Q Consensus 39 ~~p~vvllHG~~~~~~~~-----~~~~~~L~~~g~~Vi~~D~pG~------~s~~~~a~dl~~~l~~l----~~~~v~lv 103 (401)
.++|||+++.+-.....| ..+++.|.++||+|+.+|+++- .+++++++.+.+.++.+ |.+++.++
T Consensus 214 ~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~~~ldDYv~~i~~Ald~V~~~tG~~~vnl~ 293 (560)
T TIGR01839 214 HARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHREWGLSTYVDALKEAVDAVRAITGSRDLNLL 293 (560)
T ss_pred CCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhcCCCHHHHHHHHHHHHHHHHHhcCCCCeeEE
Confidence 457999999999777666 5688999999999999999863 57888888777766654 67899999
Q ss_pred EEchhHHHHHH----HHHhCCc-ccceEEEecCCCCC
Q 015755 104 GTSLGGFLAQL----FAQHRPR-RVRSLVLSNTFLDT 135 (401)
Q Consensus 104 GhS~Gg~ia~~----~A~~~P~-~V~~lvli~~~~~~ 135 (401)
|+|+||.+++. +++++++ +|++++++.+..+.
T Consensus 294 GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf 330 (560)
T TIGR01839 294 GACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDS 330 (560)
T ss_pred EECcchHHHHHHHHHHHhcCCCCceeeEEeeeccccc
Confidence 99999999987 8888886 89999999887654
No 89
>COG0400 Predicted esterase [General function prediction only]
Probab=99.39 E-value=1.5e-11 Score=105.87 Aligned_cols=164 Identities=18% Similarity=0.175 Sum_probs=118.6
Q ss_pred CCCCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCC----C-----------CCC-------hHHHHHHHHHHHH
Q 015755 36 GPKVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIP----R-----------VWN-------HHEWIQAFEKFLD 93 (401)
Q Consensus 36 G~~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~p----G-----------~~s-------~~~~a~dl~~~l~ 93 (401)
+.+..|+||++||+|++..++.+....+. .++.++.+--+ | .++ .+.+++.+..+.+
T Consensus 14 ~~p~~~~iilLHG~Ggde~~~~~~~~~~~-P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~ 92 (207)
T COG0400 14 GDPAAPLLILLHGLGGDELDLVPLPELIL-PNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAE 92 (207)
T ss_pred CCCCCcEEEEEecCCCChhhhhhhhhhcC-CCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHH
Confidence 34456789999999999999988555554 45666665432 1 122 3445566666777
Q ss_pred HhCC--ceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCCCCCCC
Q 015755 94 AIDV--HHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHDGPHEP 171 (401)
Q Consensus 94 ~l~~--~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (401)
++++ ++++++|+|-||++++.+..++|+.++++|+.++.......
T Consensus 93 ~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~--------------------------------- 139 (207)
T COG0400 93 EYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE--------------------------------- 139 (207)
T ss_pred HhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc---------------------------------
Confidence 7777 69999999999999999999999999999999985432210
Q ss_pred chhhhHHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcC----CCeEEEec
Q 015755 172 FIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYS----GARQAYMK 247 (401)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~ 247 (401)
........|+++++|..| .++|.....++.+.+. +++...++
T Consensus 140 ---------------------------------~~~~~~~~pill~hG~~D-pvvp~~~~~~l~~~l~~~g~~v~~~~~~ 185 (207)
T COG0400 140 ---------------------------------LLPDLAGTPILLSHGTED-PVVPLALAEALAEYLTASGADVEVRWHE 185 (207)
T ss_pred ---------------------------------cccccCCCeEEEeccCcC-CccCHHHHHHHHHHHHHcCCCEEEEEec
Confidence 000113458999999999 6889988888887763 45677787
Q ss_pred CCCCCCCcCChHHHHHHHHHHHhhc
Q 015755 248 TGGEFPFLSRPDEVNLHLQLHLRRV 272 (401)
Q Consensus 248 ~~GH~~~~e~p~~v~~~i~~fl~~~ 272 (401)
+||.. +.+..+.++.|+.+.
T Consensus 186 -~GH~i----~~e~~~~~~~wl~~~ 205 (207)
T COG0400 186 -GGHEI----PPEELEAARSWLANT 205 (207)
T ss_pred -CCCcC----CHHHHHHHHHHHHhc
Confidence 99966 455666777788753
No 90
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.37 E-value=1e-10 Score=99.61 Aligned_cols=182 Identities=19% Similarity=0.269 Sum_probs=112.7
Q ss_pred EEEeCCCCCChHHHHHH--HHHHhhC--CcEEEEecCCCCCChHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHh
Q 015755 43 LICLPGTAGTAEVYYKQ--IMALSMK--GYRVISVDIPRVWNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQH 118 (401)
Q Consensus 43 vvllHG~~~~~~~~~~~--~~~L~~~--g~~Vi~~D~pG~~s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~ 118 (401)
|+++||+.++..+.... ...+.+. ...++.+|+| ...+...+.+..+++....+.+.|||.||||+.|..+|.+
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~--~~p~~a~~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~ 79 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP--PFPEEAIAQLEQLIEELKPENVVLIGSSLGGFYATYLAER 79 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC--cCHHHHHHHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHH
Confidence 89999999988766542 3445543 3567778877 3567777888999998887789999999999999999999
Q ss_pred CCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCCCCCCCchhhhHHHHHHhhhhcCHHHHHHHhhh
Q 015755 119 RPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTL 198 (401)
Q Consensus 119 ~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (401)
++ +++ ||+||...+.... .............+.+. +....... +.
T Consensus 80 ~~--~~a-vLiNPav~p~~~l-----------------~~~iG~~~~~~~~e~~~-------------~~~~~~~~-l~- 124 (187)
T PF05728_consen 80 YG--LPA-VLINPAVRPYELL-----------------QDYIGEQTNPYTGESYE-------------LTEEHIEE-LK- 124 (187)
T ss_pred hC--CCE-EEEcCCCCHHHHH-----------------HHhhCccccCCCCccce-------------echHhhhh-cc-
Confidence 86 344 9999976643221 11111100000000000 00000000 00
Q ss_pred hcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEEEecCCCCCCCcCChHHHHHHHHHHHh
Q 015755 199 TADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFLSRPDEVNLHLQLHLR 270 (401)
Q Consensus 199 ~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~ 270 (401)
.........+.++++++++.|. +.+.. ...+.+.++..++.+|++|-+ ++-++....|.+|+.
T Consensus 125 ---~l~~~~~~~~~~~lvll~~~DE-vLd~~---~a~~~~~~~~~~i~~ggdH~f--~~f~~~l~~i~~f~~ 187 (187)
T PF05728_consen 125 ---ALEVPYPTNPERYLVLLQTGDE-VLDYR---EAVAKYRGCAQIIEEGGDHSF--QDFEEYLPQIIAFLQ 187 (187)
T ss_pred ---eEeccccCCCccEEEEEecCCc-ccCHH---HHHHHhcCceEEEEeCCCCCC--ccHHHHHHHHHHhhC
Confidence 0011113345679999999995 66653 233445566666778899975 456677778888863
No 91
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.37 E-value=7.2e-12 Score=112.81 Aligned_cols=117 Identities=23% Similarity=0.345 Sum_probs=97.2
Q ss_pred CCceEEEeeCCeeEEEEEcCCC------CCCcEEEeCCCCCChHHHHHHHHHHhhC---------CcEEEEecCCCCC--
Q 015755 17 QVPLHKIPIGTKQWRYYDFGPK------VVPPLICLPGTAGTAEVYYKQIMALSMK---------GYRVISVDIPRVW-- 79 (401)
Q Consensus 17 ~~~~~~~~~~~~~l~y~~~G~~------~~p~vvllHG~~~~~~~~~~~~~~L~~~---------g~~Vi~~D~pG~~-- 79 (401)
+.+.-+.++.|.++||...-++ ..-|||++|||+|+-..|+.+++.|.+. -|.||++.+||||
T Consensus 123 ~f~qykTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwS 202 (469)
T KOG2565|consen 123 QFKQYKTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWS 202 (469)
T ss_pred hhhhhhhhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccC
Confidence 3445567788999998765443 1238999999999999999999988753 2789999999995
Q ss_pred --------ChHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCC
Q 015755 80 --------NHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFL 133 (401)
Q Consensus 80 --------s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~ 133 (401)
+..+.|..+..++-.+|.+++.+=|-.+|+.|+..+|..+|++|.|+-+-.+..
T Consensus 203 d~~sk~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~ 264 (469)
T KOG2565|consen 203 DAPSKTGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFV 264 (469)
T ss_pred cCCccCCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhccccc
Confidence 456778888999999999999999999999999999999999999987755443
No 92
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.36 E-value=1.4e-10 Score=108.64 Aligned_cols=224 Identities=17% Similarity=0.181 Sum_probs=123.4
Q ss_pred ceEEEeeCCeeEEEEEcCC---CCCCcEEEeCCCCCChHHHHHHH-HHHhhCCcEEEEecCCCCCCh---------HHHH
Q 015755 19 PLHKIPIGTKQWRYYDFGP---KVVPPLICLPGTAGTAEVYYKQI-MALSMKGYRVISVDIPRVWNH---------HEWI 85 (401)
Q Consensus 19 ~~~~~~~~~~~l~y~~~G~---~~~p~vvllHG~~~~~~~~~~~~-~~L~~~g~~Vi~~D~pG~~s~---------~~~a 85 (401)
+.-.|...|..|..+.+-+ +..|+||++.|+-+-...+..++ +.|..+|+.++++|.||.|.. +.+.
T Consensus 166 ~~v~iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~ 245 (411)
T PF06500_consen 166 EEVEIPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLH 245 (411)
T ss_dssp EEEEEEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHH
T ss_pred EEEEEeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHH
Confidence 3344555666665554433 23467888888888887766555 568889999999999998632 3445
Q ss_pred HHHHHHHHHhC---CceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhh
Q 015755 86 QAFEKFLDAID---VHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLT 162 (401)
Q Consensus 86 ~dl~~~l~~l~---~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (401)
..+.+.+.... ..+|.++|.|+||++|.++|..++++++++|..++.+..---. . ......|..... .+..
T Consensus 246 ~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~-~----~~~~~~P~my~d-~LA~ 319 (411)
T PF06500_consen 246 QAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTD-P----EWQQRVPDMYLD-VLAS 319 (411)
T ss_dssp HHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH--H----HHHTTS-HHHHH-HHHH
T ss_pred HHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhcc-H----HHHhcCCHHHHH-HHHH
Confidence 55555555543 3589999999999999999999999999999999865321100 0 000001111111 1111
Q ss_pred ccCCCCCCCchhhhHHHHHHhhhhcCHHHHHHHhhhhcc-cc-cccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCC
Q 015755 163 GIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTLTAD-AA-SVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSG 240 (401)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~ 240 (401)
.+.. ...+.+.+...+....- .. .+.....++|+|.+.|++| .++|.+..+-++..-.+
T Consensus 320 rlG~------------------~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D-~v~P~eD~~lia~~s~~ 380 (411)
T PF06500_consen 320 RLGM------------------AAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDD-PVSPIEDSRLIAESSTD 380 (411)
T ss_dssp HCT-------------------SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT--SSS-HHHHHHHHHTBTT
T ss_pred HhCC------------------ccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCC-CCCCHHHHHHHHhcCCC
Confidence 1100 01112222222221111 11 1223457889999999999 69999999888887777
Q ss_pred CeEEEecCCC-CCCCcCChHHHHHHHHHHHhh
Q 015755 241 ARQAYMKTGG-EFPFLSRPDEVNLHLQLHLRR 271 (401)
Q Consensus 241 ~~~~~i~~~G-H~~~~e~p~~v~~~i~~fl~~ 271 (401)
.+...++... |. .-+.-...+.+||+.
T Consensus 381 gk~~~~~~~~~~~----gy~~al~~~~~Wl~~ 408 (411)
T PF06500_consen 381 GKALRIPSKPLHM----GYPQALDEIYKWLED 408 (411)
T ss_dssp -EEEEE-SSSHHH----HHHHHHHHHHHHHHH
T ss_pred CceeecCCCcccc----chHHHHHHHHHHHHH
Confidence 8888888544 32 224556667777764
No 93
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.36 E-value=1.8e-10 Score=108.89 Aligned_cols=227 Identities=15% Similarity=0.138 Sum_probs=139.9
Q ss_pred CcEEEeCCCCCChHHH-HHHHHHHhhCCcEEEEecCC---------CCCChHHHHHHHHHHHHHhCCceEEEEEEchhHH
Q 015755 41 PPLICLPGTAGTAEVY-YKQIMALSMKGYRVISVDIP---------RVWNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGF 110 (401)
Q Consensus 41 p~vvllHG~~~~~~~~-~~~~~~L~~~g~~Vi~~D~p---------G~~s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ 110 (401)
|+||++.-+.+..... +.+++.|.. |+.|+..||. |+.+++++++-+.++++++|.+ ++++|+|+||.
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~ 180 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAV 180 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhH
Confidence 7999999999777654 557788886 9999999983 5678999999999999999877 99999999999
Q ss_pred HHHHHHHhC-----CcccceEEEecCCCCChhH-hhcCCcc---------------------ccc-ccchhhHHHHHHhh
Q 015755 111 LAQLFAQHR-----PRRVRSLVLSNTFLDTHSF-AAAMPWA---------------------PIV-SWTPSFLLKRYVLT 162 (401)
Q Consensus 111 ia~~~A~~~-----P~~V~~lvli~~~~~~~~~-~~~~~~~---------------------~~~-~~~~~~~~~~~~~~ 162 (401)
.++.+++.+ |++++++++++++.+.... .....+. ... ...+.++....+..
T Consensus 181 ~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~ 260 (406)
T TIGR01849 181 PVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFIS 260 (406)
T ss_pred HHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHHHH
Confidence 987766654 6789999999987764321 0000000 000 01222222211110
Q ss_pred ---------------ccCCCCCCCchhhhHHHHH--HhhhhcCHHHHHHHhhhh------------cccccccccccC-C
Q 015755 163 ---------------GIHDGPHEPFIADSVDFVV--CQVETLSREDLASRLTLT------------ADAASVGNLLLS-D 212 (401)
Q Consensus 163 ---------------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~i~-~ 212 (401)
.+... ......+....+. .....+..+-+...+... .....++...|+ +
T Consensus 261 mnp~r~~~~~~~~~~~l~~g-d~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~ 339 (406)
T TIGR01849 261 MNLDRHTKAHSDFFLHLVKG-DGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAITRV 339 (406)
T ss_pred cCcchHHHHHHHHHHHHhcC-CcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHCccc
Confidence 00000 0011111111111 001111111111111111 111223344578 9
Q ss_pred cEEEEEeCCCCCCCcHHHHHHHHHHc---C--CCeEEEecCCCCCCCcCC---hHHHHHHHHHHHhh
Q 015755 213 SHITIMDTNDYCATSQQLKDQLSERY---S--GARQAYMKTGGEFPFLSR---PDEVNLHLQLHLRR 271 (401)
Q Consensus 213 Pvlli~G~~D~~~~~~~~~~~~~~~~---~--~~~~~~i~~~GH~~~~e~---p~~v~~~i~~fl~~ 271 (401)
|++.|.|++| .++++.....+.+.. + ..+.+..+++||+..+.- .+++...|.+||.+
T Consensus 340 pll~V~ge~D-~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 340 ALLTVEGEND-DISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred ceEEEeccCC-CcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 9999999999 589999999888874 4 245677778999876643 46788889999875
No 94
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.33 E-value=1e-10 Score=96.41 Aligned_cols=164 Identities=16% Similarity=0.125 Sum_probs=110.2
Q ss_pred CCCCCCcEEEeC-----CCCCChHHHHHHHHHHhhCCcEEEEecCCCCCC-----------hHHHHHHHHHHHHHhCC-c
Q 015755 36 GPKVVPPLICLP-----GTAGTAEVYYKQIMALSMKGYRVISVDIPRVWN-----------HHEWIQAFEKFLDAIDV-H 98 (401)
Q Consensus 36 G~~~~p~vvllH-----G~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~s-----------~~~~a~dl~~~l~~l~~-~ 98 (401)
..+..|..|++| |...+...-..++..|.+.||.++.+|+||.|. .++.... .++++.... .
T Consensus 24 ~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aa-ldW~~~~hp~s 102 (210)
T COG2945 24 KTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAA-LDWLQARHPDS 102 (210)
T ss_pred CCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHH-HHHHHhhCCCc
Confidence 334567778887 444555667788889999999999999998642 2333222 333333222 2
Q ss_pred e-EEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCCCCCCCchhhhH
Q 015755 99 H-IHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHDGPHEPFIADSV 177 (401)
Q Consensus 99 ~-v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (401)
+ ..+.|+|+|++|++.+|.+.|+ ....+.+.+.+...
T Consensus 103 ~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~----------------------------------------- 140 (210)
T COG2945 103 ASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAY----------------------------------------- 140 (210)
T ss_pred hhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCch-----------------------------------------
Confidence 3 3688999999999999999876 34444444422100
Q ss_pred HHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEEEecCCCCCCCcCC
Q 015755 178 DFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFLSR 257 (401)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~ 257 (401)
++ . -....++|.++|+|+.|+ ++.....-...+. ...+++++++++||++ .+
T Consensus 141 -------------df-s-----------~l~P~P~~~lvi~g~~Dd-vv~l~~~l~~~~~-~~~~~i~i~~a~HFF~-gK 192 (210)
T COG2945 141 -------------DF-S-----------FLAPCPSPGLVIQGDADD-VVDLVAVLKWQES-IKITVITIPGADHFFH-GK 192 (210)
T ss_pred -------------hh-h-----------hccCCCCCceeEecChhh-hhcHHHHHHhhcC-CCCceEEecCCCceec-cc
Confidence 00 0 012367789999999995 6666555555554 3568889999999986 55
Q ss_pred hHHHHHHHHHHHh
Q 015755 258 PDEVNLHLQLHLR 270 (401)
Q Consensus 258 p~~v~~~i~~fl~ 270 (401)
-+.+.+.|.+|+.
T Consensus 193 l~~l~~~i~~~l~ 205 (210)
T COG2945 193 LIELRDTIADFLE 205 (210)
T ss_pred HHHHHHHHHHHhh
Confidence 6789999999985
No 95
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.29 E-value=1.8e-10 Score=115.68 Aligned_cols=110 Identities=15% Similarity=0.089 Sum_probs=85.7
Q ss_pred CCeeEEEEEcC---CCCCCcEEEeCCCCCChH---HH-HHHHHHHhhCCcEEEEecCCCCCCh--------HHHHHHHHH
Q 015755 26 GTKQWRYYDFG---PKVVPPLICLPGTAGTAE---VY-YKQIMALSMKGYRVISVDIPRVWNH--------HEWIQAFEK 90 (401)
Q Consensus 26 ~~~~l~y~~~G---~~~~p~vvllHG~~~~~~---~~-~~~~~~L~~~g~~Vi~~D~pG~~s~--------~~~a~dl~~ 90 (401)
+|.+|++..+- .+..|+||++||++.+.. .+ ......|.++||.|+++|+||++.. ...++|+.+
T Consensus 5 DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~~~~D~~~ 84 (550)
T TIGR00976 5 DGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLGSDEAADGYD 84 (550)
T ss_pred CCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecCcccchHHHH
Confidence 56777765553 335689999999998753 12 2234567778999999999998633 466788888
Q ss_pred HHHHhCC-----ceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCC
Q 015755 91 FLDAIDV-----HHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDT 135 (401)
Q Consensus 91 ~l~~l~~-----~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~ 135 (401)
+++.+.. .+|.++|||+||.+++.+|..+|+.++++|..++....
T Consensus 85 ~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 85 LVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDL 134 (550)
T ss_pred HHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccch
Confidence 8887632 48999999999999999999999999999998886543
No 96
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.26 E-value=4.8e-11 Score=107.24 Aligned_cols=117 Identities=13% Similarity=0.154 Sum_probs=73.3
Q ss_pred EEEeeCCeeEEEEEcCCCCCCcEEEeCCCCCChH---HHHHHHHHHhhCCcEEEEecCC------CCCChHHHHHHHHHH
Q 015755 21 HKIPIGTKQWRYYDFGPKVVPPLICLPGTAGTAE---VYYKQIMALSMKGYRVISVDIP------RVWNHHEWIQAFEKF 91 (401)
Q Consensus 21 ~~~~~~~~~l~y~~~G~~~~p~vvllHG~~~~~~---~~~~~~~~L~~~g~~Vi~~D~p------G~~s~~~~a~dl~~~ 91 (401)
+.+..+-.-+.|...+......||||.|++..-. ....++..|...+|.|+-+-+. |.++++.-++||.++
T Consensus 14 h~Y~~~~~afe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~~D~~eI~~~ 93 (303)
T PF08538_consen 14 HHYTPKLVAFEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLDRDVEEIAQL 93 (303)
T ss_dssp EEECCTTEEEEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HHHHHHHHHHH
T ss_pred EEECCCCeEEEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhhhHHHHHHHH
Confidence 3444444555555544333458999999987554 3566777887669999999985 345788888888887
Q ss_pred HHHh--------CCceEEEEEEchhHHHHHHHHHhCC-----cccceEEEecCCCCChh
Q 015755 92 LDAI--------DVHHIHLYGTSLGGFLAQLFAQHRP-----RRVRSLVLSNTFLDTHS 137 (401)
Q Consensus 92 l~~l--------~~~~v~lvGhS~Gg~ia~~~A~~~P-----~~V~~lvli~~~~~~~~ 137 (401)
++.+ +.++|+|+|||.|+.-+++|+.+.. ..|+|.||-+|..+.+.
T Consensus 94 v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa 152 (303)
T PF08538_consen 94 VEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREA 152 (303)
T ss_dssp HHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTS
T ss_pred HHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhH
Confidence 7654 3458999999999999999998752 57999999999876543
No 97
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.26 E-value=6.1e-10 Score=103.30 Aligned_cols=200 Identities=17% Similarity=0.115 Sum_probs=109.1
Q ss_pred CCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC--------------------Ch---------HHHHHHHH
Q 015755 39 VVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW--------------------NH---------HEWIQAFE 89 (401)
Q Consensus 39 ~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~--------------------s~---------~~~a~dl~ 89 (401)
.-|.||.+||.++....|...+. ++..||.|+.+|.||++ .+ ..+..|..
T Consensus 82 ~~Pavv~~hGyg~~~~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ 160 (320)
T PF05448_consen 82 KLPAVVQFHGYGGRSGDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAV 160 (320)
T ss_dssp SEEEEEEE--TT--GGGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHH
T ss_pred CcCEEEEecCCCCCCCCcccccc-cccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHH
Confidence 45789999999999888876654 45589999999999863 01 12333444
Q ss_pred HHHHHh------CCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhc
Q 015755 90 KFLDAI------DVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTG 163 (401)
Q Consensus 90 ~~l~~l------~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (401)
..++.+ +.+++.+.|.|.||.+++.+|+..| +|++++...|+...-......... ..+...+..+
T Consensus 161 ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~~~~~~~~~~----~~~y~~~~~~---- 231 (320)
T PF05448_consen 161 RAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDFRRALELRAD----EGPYPEIRRY---- 231 (320)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSHHHHHHHT------STTTHHHHHH----
T ss_pred HHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccchhhhhhcCCc----cccHHHHHHH----
Confidence 333332 2358999999999999999999986 699999998865543211100000 0000000111
Q ss_pred cCCCCCCCchhhhHHHHHHhhh-hcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcC-CC
Q 015755 164 IHDGPHEPFIADSVDFVVCQVE-TLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYS-GA 241 (401)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~-~~ 241 (401)
+..... ....+.....+.. .+ ...-...++||+++-+|-.| .++|+..+-.....++ ..
T Consensus 232 ----------------~~~~d~~~~~~~~v~~~L~Y-~D-~~nfA~ri~~pvl~~~gl~D-~~cPP~t~fA~yN~i~~~K 292 (320)
T PF05448_consen 232 ----------------FRWRDPHHEREPEVFETLSY-FD-AVNFARRIKCPVLFSVGLQD-PVCPPSTQFAAYNAIPGPK 292 (320)
T ss_dssp ----------------HHHHSCTHCHHHHHHHHHHT-T--HHHHGGG--SEEEEEEETT--SSS-HHHHHHHHCC--SSE
T ss_pred ----------------HhccCCCcccHHHHHHHHhh-hh-HHHHHHHcCCCEEEEEecCC-CCCCchhHHHHHhccCCCe
Confidence 100000 0001111111111 11 11112347899999999999 6899998888887776 47
Q ss_pred eEEEecCCCCCCCcCChHHH-HHHHHHHHhh
Q 015755 242 RQAYMKTGGEFPFLSRPDEV-NLHLQLHLRR 271 (401)
Q Consensus 242 ~~~~i~~~GH~~~~e~p~~v-~~~i~~fl~~ 271 (401)
++.+++..||. .+.+. .+...+||.+
T Consensus 293 ~l~vyp~~~He----~~~~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 293 ELVVYPEYGHE----YGPEFQEDKQLNFLKE 319 (320)
T ss_dssp EEEEETT--SS----TTHHHHHHHHHHHHHH
T ss_pred eEEeccCcCCC----chhhHHHHHHHHHHhc
Confidence 89999999994 34555 7778888865
No 98
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.24 E-value=8.5e-11 Score=119.00 Aligned_cols=102 Identities=20% Similarity=0.214 Sum_probs=83.1
Q ss_pred CceEEEeeCCeeEEEEEcCCC---------CCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCCC--------
Q 015755 18 VPLHKIPIGTKQWRYYDFGPK---------VVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWN-------- 80 (401)
Q Consensus 18 ~~~~~~~~~~~~l~y~~~G~~---------~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~s-------- 80 (401)
.+.+.+..++.++.|...|.+ ..|+|||+||++++...|..++..|.++||+|+++|+||||.
T Consensus 418 vp~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~ 497 (792)
T TIGR03502 418 VPVLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANAS 497 (792)
T ss_pred cceEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccc
Confidence 556666678888888776543 125899999999999999999999987899999999999852
Q ss_pred ------------------------hHHHHHHHHHHHHHhC----------------CceEEEEEEchhHHHHHHHHHhC
Q 015755 81 ------------------------HHEWIQAFEKFLDAID----------------VHHIHLYGTSLGGFLAQLFAQHR 119 (401)
Q Consensus 81 ------------------------~~~~a~dl~~~l~~l~----------------~~~v~lvGhS~Gg~ia~~~A~~~ 119 (401)
+++.+.|+..+...++ ..+++++||||||.++..++...
T Consensus 498 ~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 498 GVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred cccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 3566788888877776 24899999999999999999753
No 99
>PRK10115 protease 2; Provisional
Probab=99.22 E-value=1.1e-09 Score=112.22 Aligned_cols=112 Identities=16% Similarity=0.186 Sum_probs=84.1
Q ss_pred eCCeeEEE-EEc-----CCCCCCcEEEeCCCCCChH--HHHHHHHHHhhCCcEEEEecCCCCC-----------------
Q 015755 25 IGTKQWRY-YDF-----GPKVVPPLICLPGTAGTAE--VYYKQIMALSMKGYRVISVDIPRVW----------------- 79 (401)
Q Consensus 25 ~~~~~l~y-~~~-----G~~~~p~vvllHG~~~~~~--~~~~~~~~L~~~g~~Vi~~D~pG~~----------------- 79 (401)
-+|.+|.+ ..+ ..+..|+||++||..+... .|......|.++||.|+.++.||-+
T Consensus 424 ~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~ 503 (686)
T PRK10115 424 RDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKN 503 (686)
T ss_pred CCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCC
Confidence 37777665 222 1234689999999888764 4666667788899999999999852
Q ss_pred ChHHHHHHHHHHHHHh--CCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCCh
Q 015755 80 NHHEWIQAFEKFLDAI--DVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTH 136 (401)
Q Consensus 80 s~~~~a~dl~~~l~~l--~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~ 136 (401)
+++++++.+..+++.- ..+++.+.|.|.||+++..++.++|++++++|...|..+..
T Consensus 504 ~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~ 562 (686)
T PRK10115 504 TFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVV 562 (686)
T ss_pred cHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHh
Confidence 3455555555555431 23589999999999999999999999999999999976644
No 100
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.22 E-value=3.2e-10 Score=92.50 Aligned_cols=172 Identities=19% Similarity=0.157 Sum_probs=120.5
Q ss_pred CcEEEeCCCCCChH-HHHHHHHHHhhCCcEEEEecCCCCCChHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhC
Q 015755 41 PPLICLPGTAGTAE-VYYKQIMALSMKGYRVISVDIPRVWNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHR 119 (401)
Q Consensus 41 p~vvllHG~~~~~~-~~~~~~~~L~~~g~~Vi~~D~pG~~s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~ 119 (401)
+.+|++||+.++.. .|......-. .+.+.+-.+-+-....++|++.+.+.+... .++++||+||+|+.++++++.+.
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l-~~a~rveq~~w~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~~v~h~~~~~ 80 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESAL-PNARRVEQDDWEAPVLDDWIARLEKEVNAA-EGPVVLVAHSLGCATVAHWAEHI 80 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhC-ccchhcccCCCCCCCHHHHHHHHHHHHhcc-CCCeEEEEecccHHHHHHHHHhh
Confidence 57999999999875 5655443221 134445555566778999999999999887 46799999999999999999988
Q ss_pred CcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCCCCCCCchhhhHHHHHHhhhhcCHHHHHHHhhhh
Q 015755 120 PRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTLT 199 (401)
Q Consensus 120 P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (401)
...|.|++|++|+-.... .. . -...
T Consensus 81 ~~~V~GalLVAppd~~~~----~~-------------------------------------------------~--~~~~ 105 (181)
T COG3545 81 QRQVAGALLVAPPDVSRP----EI-------------------------------------------------R--PKHL 105 (181)
T ss_pred hhccceEEEecCCCcccc----cc-------------------------------------------------c--hhhc
Confidence 779999999998522110 00 0 0000
Q ss_pred cccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEEEecCCCCCCCcC---ChHHHHHHHHHHHhh
Q 015755 200 ADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFLS---RPDEVNLHLQLHLRR 271 (401)
Q Consensus 200 ~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e---~p~~v~~~i~~fl~~ 271 (401)
......+...++-|.++|...+| ++++.+.++.+++.. ++.++.+.++||+--.+ .-.+....+..|+.+
T Consensus 106 ~tf~~~p~~~lpfps~vvaSrnD-p~~~~~~a~~~a~~w-gs~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 106 MTFDPIPREPLPFPSVVVASRND-PYVSYEHAEDLANAW-GSALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred cccCCCccccCCCceeEEEecCC-CCCCHHHHHHHHHhc-cHhheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 01112223345668999999999 799999999999988 56888888899975432 224455666666544
No 101
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.22 E-value=1.5e-09 Score=96.50 Aligned_cols=165 Identities=18% Similarity=0.150 Sum_probs=122.4
Q ss_pred CCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCC-------C--------------ChHHHHHHHHHHHHHhC--
Q 015755 40 VPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRV-------W--------------NHHEWIQAFEKFLDAID-- 96 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~-------~--------------s~~~~a~dl~~~l~~l~-- 96 (401)
.|.||++|++.+-........+.|+..||.|+++|+-+. . +..+...|+...++.+.
T Consensus 27 ~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~ 106 (236)
T COG0412 27 FPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQ 106 (236)
T ss_pred CCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhC
Confidence 389999999999999999999999999999999998652 0 11456667777776663
Q ss_pred ----CceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCCCCCCCc
Q 015755 97 ----VHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHDGPHEPF 172 (401)
Q Consensus 97 ----~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (401)
.++|.++|+||||.+++.++.+.| .|++.|..-+.......
T Consensus 107 ~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~~---------------------------------- 151 (236)
T COG0412 107 PQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADDT---------------------------------- 151 (236)
T ss_pred CCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCcc----------------------------------
Confidence 457999999999999999999988 68888876663221100
Q ss_pred hhhhHHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcC----CCeEEEecC
Q 015755 173 IADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYS----GARQAYMKT 248 (401)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~ 248 (401)
.....+++|+++++|+.| ..++....+.+.+.+. ..++.++++
T Consensus 152 --------------------------------~~~~~~~~pvl~~~~~~D-~~~p~~~~~~~~~~~~~~~~~~~~~~y~g 198 (236)
T COG0412 152 --------------------------------ADAPKIKVPVLLHLAGED-PYIPAADVDALAAALEDAGVKVDLEIYPG 198 (236)
T ss_pred --------------------------------cccccccCcEEEEecccC-CCCChhHHHHHHHHHHhcCCCeeEEEeCC
Confidence 002347789999999999 6788887777776653 467899999
Q ss_pred CCCCCCcCC--------h---HHHHHHHHHHHhhc
Q 015755 249 GGEFPFLSR--------P---DEVNLHLQLHLRRV 272 (401)
Q Consensus 249 ~GH~~~~e~--------p---~~v~~~i~~fl~~~ 272 (401)
+.|-++.+. + +.-.+.+.+|+++.
T Consensus 199 a~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~ 233 (236)
T COG0412 199 AGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRL 233 (236)
T ss_pred CccccccCCCcccccCCHHHHHHHHHHHHHHHHHh
Confidence 989776432 1 23345666777654
No 102
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.21 E-value=2.8e-10 Score=126.17 Aligned_cols=94 Identities=29% Similarity=0.272 Sum_probs=83.1
Q ss_pred CCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC-------ChHHHHHHHHHHHHHhCC-ceEEEEEEchhHH
Q 015755 39 VVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW-------NHHEWIQAFEKFLDAIDV-HHIHLYGTSLGGF 110 (401)
Q Consensus 39 ~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~-------s~~~~a~dl~~~l~~l~~-~~v~lvGhS~Gg~ 110 (401)
++++++|+||++++...|..+...|. .+++|+.+|+||++ +++++++++...++.+.. .+++++||||||.
T Consensus 1067 ~~~~l~~lh~~~g~~~~~~~l~~~l~-~~~~v~~~~~~g~~~~~~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~Gg~ 1145 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQFSVLSRYLD-PQWSIYGIQSPRPDGPMQTATSLDEVCEAHLATLLEQQPHGPYHLLGYSLGGT 1145 (1296)
T ss_pred CCCCeEEecCCCCchHHHHHHHHhcC-CCCcEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCEEEEEechhhH
Confidence 35899999999999999999999997 57999999999984 688999999999987654 4899999999999
Q ss_pred HHHHHHHh---CCcccceEEEecCCC
Q 015755 111 LAQLFAQH---RPRRVRSLVLSNTFL 133 (401)
Q Consensus 111 ia~~~A~~---~P~~V~~lvli~~~~ 133 (401)
+|.++|.+ .+++|..++++++..
T Consensus 1146 vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1146 LAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred HHHHHHHHHHHcCCceeEEEEecCCC
Confidence 99999986 578999999998754
No 103
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.16 E-value=1.7e-09 Score=95.51 Aligned_cols=102 Identities=22% Similarity=0.291 Sum_probs=75.5
Q ss_pred EEEcCCCCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCCC--hH---HHHHHHHHHHHH-----h------
Q 015755 32 YYDFGPKVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWN--HH---EWIQAFEKFLDA-----I------ 95 (401)
Q Consensus 32 y~~~G~~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~s--~~---~~a~dl~~~l~~-----l------ 95 (401)
|+....+.=|+|||+||++.....|..++.++++.||-|+.+|+..... .. +.+..+.+++.. +
T Consensus 9 ~~P~~~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~ 88 (259)
T PF12740_consen 9 YYPSSAGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVKP 88 (259)
T ss_pred EecCCCCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhccccccc
Confidence 3444444568999999999888888999999999999999999655321 11 122222222211 1
Q ss_pred CCceEEEEEEchhHHHHHHHHHhC-----CcccceEEEecCCC
Q 015755 96 DVHHIHLYGTSLGGFLAQLFAQHR-----PRRVRSLVLSNTFL 133 (401)
Q Consensus 96 ~~~~v~lvGhS~Gg~ia~~~A~~~-----P~~V~~lvli~~~~ 133 (401)
+..++.|.|||-||-+|..++..+ +.+++++|+++|.-
T Consensus 89 D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 89 DFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred cccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 345899999999999999999987 56899999999964
No 104
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.12 E-value=3.9e-09 Score=95.74 Aligned_cols=94 Identities=20% Similarity=0.393 Sum_probs=77.8
Q ss_pred CCcEEEeCCCCCChHHHHHHHHHHhh---CCcEEEEecCCCC---------------CChHHHHHHHHHHHHHh------
Q 015755 40 VPPLICLPGTAGTAEVYYKQIMALSM---KGYRVISVDIPRV---------------WNHHEWIQAFEKFLDAI------ 95 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~~~~~~~~L~~---~g~~Vi~~D~pG~---------------~s~~~~a~dl~~~l~~l------ 95 (401)
++.|||++|.+|-...|.+++..|.+ ..|.|+++...|| ++.++.++-..++++++
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 45799999999999999999888764 3799999999998 34566666666666554
Q ss_pred CCceEEEEEEchhHHHHHHHHHhCC---cccceEEEecCCC
Q 015755 96 DVHHIHLYGTSLGGFLAQLFAQHRP---RRVRSLVLSNTFL 133 (401)
Q Consensus 96 ~~~~v~lvGhS~Gg~ia~~~A~~~P---~~V~~lvli~~~~ 133 (401)
...+++|+|||+|+++++++..+++ .+|.+++++-|..
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 2347999999999999999999999 7899999998864
No 105
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.10 E-value=6.4e-09 Score=92.52 Aligned_cols=93 Identities=24% Similarity=0.276 Sum_probs=80.7
Q ss_pred CcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC-------ChHHHHHHHHHHHHHhCC-ceEEEEEEchhHHHH
Q 015755 41 PPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW-------NHHEWIQAFEKFLDAIDV-HHIHLYGTSLGGFLA 112 (401)
Q Consensus 41 p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~-------s~~~~a~dl~~~l~~l~~-~~v~lvGhS~Gg~ia 112 (401)
|+|+|+|+.+|....|.++...|.. ...|+.++.||++ +++++++...+.|..... .+++|+|||+||.+|
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~-~~~v~~l~a~g~~~~~~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~vA 79 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGP-LLPVYGLQAPGYGAGEQPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGAVA 79 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhcc-CceeeccccCcccccccccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccHHH
Confidence 6899999999999999999999985 5999999999974 788888887777766644 489999999999999
Q ss_pred HHHHHh---CCcccceEEEecCCCC
Q 015755 113 QLFAQH---RPRRVRSLVLSNTFLD 134 (401)
Q Consensus 113 ~~~A~~---~P~~V~~lvli~~~~~ 134 (401)
..+|.+ ..+.|..|+++++.+.
T Consensus 80 ~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 80 FEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999986 3567999999999876
No 106
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.09 E-value=1.7e-09 Score=94.91 Aligned_cols=152 Identities=20% Similarity=0.262 Sum_probs=84.9
Q ss_pred CCcEEEeCCCCCChHHHHHHHHHHhh---C-CcEEEEecCCCC-------------------------------------
Q 015755 40 VPPLICLPGTAGTAEVYYKQIMALSM---K-GYRVISVDIPRV------------------------------------- 78 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~~~~~~~~L~~---~-g~~Vi~~D~pG~------------------------------------- 78 (401)
++.||||||++.|+..|..+...|.+ + ++..+.+|-|--
T Consensus 4 k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~ 83 (212)
T PF03959_consen 4 KPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHEY 83 (212)
T ss_dssp --EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGGG
T ss_pred CceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcccc
Confidence 67899999999999999877655432 3 799999886510
Q ss_pred CChHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhC--------CcccceEEEecCCCCChhHhhcCCccccccc
Q 015755 79 WNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHR--------PRRVRSLVLSNTFLDTHSFAAAMPWAPIVSW 150 (401)
Q Consensus 79 ~s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~--------P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~ 150 (401)
..+++..+.|.++++..|. =..|+|+|.||.+|..++... .-.++-+|+++++......
T Consensus 84 ~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~------------ 150 (212)
T PF03959_consen 84 EGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD------------ 150 (212)
T ss_dssp ---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-------------
T ss_pred cCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh------------
Confidence 1234555566666666552 245899999999999888642 1246788888875332110
Q ss_pred chhhHHHHHHhhccCCCCCCCchhhhHHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHH
Q 015755 151 TPSFLLKRYVLTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQL 230 (401)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~ 230 (401)
+. .......+++|+|.|+|.+| .+++++.
T Consensus 151 ---------------------------------------------~~-----~~~~~~~i~iPtlHv~G~~D-~~~~~~~ 179 (212)
T PF03959_consen 151 ---------------------------------------------YQ-----ELYDEPKISIPTLHVIGEND-PVVPPER 179 (212)
T ss_dssp ---------------------------------------------GT-----TTT--TT---EEEEEEETT--SSS-HHH
T ss_pred ---------------------------------------------hh-----hhhccccCCCCeEEEEeCCC-CCcchHH
Confidence 00 00022346789999999999 6889888
Q ss_pred HHHHHHHcCC-CeEEEecCCCCCCCcC
Q 015755 231 KDQLSERYSG-ARQAYMKTGGEFPFLS 256 (401)
Q Consensus 231 ~~~~~~~~~~-~~~~~i~~~GH~~~~e 256 (401)
.+.+.+.+.+ .+++..+ +||.+...
T Consensus 180 s~~L~~~~~~~~~v~~h~-gGH~vP~~ 205 (212)
T PF03959_consen 180 SEALAEMFDPDARVIEHD-GGHHVPRK 205 (212)
T ss_dssp HHHHHHHHHHHEEEEEES-SSSS----
T ss_pred HHHHHHhccCCcEEEEEC-CCCcCcCC
Confidence 8999988866 6666665 88877644
No 107
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.06 E-value=1.1e-08 Score=93.50 Aligned_cols=224 Identities=17% Similarity=0.182 Sum_probs=127.2
Q ss_pred CCCCcEEEeCCCCCChHHHHH-H-HHHHhhCCcEEEEecCCCCCC-------------hHH-------H---HHHHHHHH
Q 015755 38 KVVPPLICLPGTAGTAEVYYK-Q-IMALSMKGYRVISVDIPRVWN-------------HHE-------W---IQAFEKFL 92 (401)
Q Consensus 38 ~~~p~vvllHG~~~~~~~~~~-~-~~~L~~~g~~Vi~~D~pG~~s-------------~~~-------~---a~dl~~~l 92 (401)
+.+|.+|.++|-|....-.+. + +..|.++|+..+.+..|-||. ..+ . +..|..++
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWL 169 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHH
Confidence 347888899998886654333 3 466777799999999987741 111 1 22345556
Q ss_pred HHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHh-----hcCCcccccccchhhHHHHHHhhccCCC
Q 015755 93 DAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFA-----AAMPWAPIVSWTPSFLLKRYVLTGIHDG 167 (401)
Q Consensus 93 ~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (401)
+..|..++.+.|.||||.+|...|...|..|..+-++++.....-|. ....|..+............ ...+...
T Consensus 170 ~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~~~~~~-~~~~~~~ 248 (348)
T PF09752_consen 170 EREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDTVYEEE-ISDIPAQ 248 (348)
T ss_pred HhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhcccchhhh-hcccccC
Confidence 66688899999999999999999999998877776776643322221 11222211111000000000 0000000
Q ss_pred CCCCchhhhHHHHHHhhhhcCHHHHHHHhh---hhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEE
Q 015755 168 PHEPFIADSVDFVVCQVETLSREDLASRLT---LTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQA 244 (401)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~ 244 (401)
.... .... ........+....... ............-+..+++|.+++| .++|......+.+..|++++.
T Consensus 249 ~~~~----~~~~--~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~D-aYVPr~~v~~Lq~~WPGsEvR 321 (348)
T PF09752_consen 249 NKSL----PLDS--MEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKND-AYVPRHGVLSLQEIWPGSEVR 321 (348)
T ss_pred cccc----cchh--hccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCc-eEechhhcchHHHhCCCCeEE
Confidence 0000 0000 0000111111111111 1111111111122334788888888 789998888999999999999
Q ss_pred EecCCCCC-CCcCChHHHHHHHHHHHh
Q 015755 245 YMKTGGEF-PFLSRPDEVNLHLQLHLR 270 (401)
Q Consensus 245 ~i~~~GH~-~~~e~p~~v~~~i~~fl~ 270 (401)
+++ +||. .++-+.+.+.++|.+-++
T Consensus 322 ~l~-gGHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 322 YLP-GGHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred Eec-CCcEEEeeechHHHHHHHHHHhh
Confidence 997 4995 456677889988887654
No 108
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.05 E-value=1.8e-09 Score=95.31 Aligned_cols=96 Identities=18% Similarity=0.242 Sum_probs=70.4
Q ss_pred CCCcEEEeCCCCCChHHHHHHHHHHhh--------CCcEEEEecCCCCC------ChHH----HHHHHHHHHHHh-----
Q 015755 39 VVPPLICLPGTAGTAEVYYKQIMALSM--------KGYRVISVDIPRVW------NHHE----WIQAFEKFLDAI----- 95 (401)
Q Consensus 39 ~~p~vvllHG~~~~~~~~~~~~~~L~~--------~g~~Vi~~D~pG~~------s~~~----~a~dl~~~l~~l----- 95 (401)
++.+||||||.+++...++.+...+.. ..++++++|+.... .+.+ +.+.+..+++.+
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~~ 82 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSNRP 82 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhccC
Confidence 468999999999999988877765521 25889999987642 2233 333445555555
Q ss_pred CCceEEEEEEchhHHHHHHHHHhCC---cccceEEEecCCCC
Q 015755 96 DVHHIHLYGTSLGGFLAQLFAQHRP---RRVRSLVLSNTFLD 134 (401)
Q Consensus 96 ~~~~v~lvGhS~Gg~ia~~~A~~~P---~~V~~lvli~~~~~ 134 (401)
+.++++||||||||.+|..++...+ +.|+.+|.++++..
T Consensus 83 ~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 83 PPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHR 124 (225)
T ss_pred CCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCC
Confidence 4578999999999999988776543 57999999988643
No 109
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.05 E-value=1e-09 Score=79.56 Aligned_cols=67 Identities=15% Similarity=0.290 Sum_probs=58.4
Q ss_pred CeeEEEEEcCCCC--CCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC----------ChHHHHHHHHHHHH
Q 015755 27 TKQWRYYDFGPKV--VPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW----------NHHEWIQAFEKFLD 93 (401)
Q Consensus 27 ~~~l~y~~~G~~~--~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~----------s~~~~a~dl~~~l~ 93 (401)
|.+|+|+.+-+++ +.+|+++||++..+..|..++..|.++||.|+++|+|||| +++++++|+..+++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 5678899888754 4589999999999999999999999999999999999996 56788888888764
No 110
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.04 E-value=1.2e-09 Score=92.57 Aligned_cols=232 Identities=13% Similarity=0.179 Sum_probs=122.3
Q ss_pred CCeeEEEEEcCCC-CCC-cEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC------------ChHHHHH-HHHH
Q 015755 26 GTKQWRYYDFGPK-VVP-PLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW------------NHHEWIQ-AFEK 90 (401)
Q Consensus 26 ~~~~l~y~~~G~~-~~p-~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~------------s~~~~a~-dl~~ 90 (401)
||..+....+... ..+ .|++-.+.+.....|++++..+.+.||.|..+|+||.+ ++.+++. |+..
T Consensus 14 DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~a 93 (281)
T COG4757 14 DGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPA 93 (281)
T ss_pred CCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHH
Confidence 5555555444432 223 45555556666667788888888889999999999974 3344442 5555
Q ss_pred HHHHh----CCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhc-CCcccccccc----hhhHHHHHHh
Q 015755 91 FLDAI----DVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAA-MPWAPIVSWT----PSFLLKRYVL 161 (401)
Q Consensus 91 ~l~~l----~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~ 161 (401)
.++.+ ...+...||||+||.+.-.+ .++| ++.+....+....-.++... ..+.....+. +-......+.
T Consensus 94 al~~~~~~~~~~P~y~vgHS~GGqa~gL~-~~~~-k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~w~g~~p 171 (281)
T COG4757 94 ALAALKKALPGHPLYFVGHSFGGQALGLL-GQHP-KYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTFWKGYMP 171 (281)
T ss_pred HHHHHHhhCCCCceEEeeccccceeeccc-ccCc-ccceeeEeccccccccchhhhhcccceeeccccccchhhccccCc
Confidence 55444 44589999999999975544 4455 44444444443332222111 1111111110 0000011111
Q ss_pred hccCC---CCCCCchhhhHHHHHHhhh-hcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHH
Q 015755 162 TGIHD---GPHEPFIADSVDFVVCQVE-TLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSER 237 (401)
Q Consensus 162 ~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~ 237 (401)
..+.. ......+.++.+.. ++.. ......+... ...-..+.+|++.+...+| ..+|+...+.+...
T Consensus 172 ~~l~G~G~d~p~~v~RdW~Rwc-R~p~y~fddp~~~~~--------~q~yaaVrtPi~~~~~~DD-~w~P~As~d~f~~~ 241 (281)
T COG4757 172 KDLLGLGSDLPGTVMRDWARWC-RHPRYYFDDPAMRNY--------RQVYAAVRTPITFSRALDD-PWAPPASRDAFASF 241 (281)
T ss_pred HhhcCCCccCcchHHHHHHHHh-cCccccccChhHhHH--------HHHHHHhcCceeeeccCCC-CcCCHHHHHHHHHh
Confidence 11111 11111111111111 1000 0000000000 0011236788999999999 69999999999999
Q ss_pred cCCCeEEE--ecC----CCCCCCcCCh-HHHHHHHHHHH
Q 015755 238 YSGARQAY--MKT----GGEFPFLSRP-DEVNLHLQLHL 269 (401)
Q Consensus 238 ~~~~~~~~--i~~----~GH~~~~e~p-~~v~~~i~~fl 269 (401)
++|+.+.. ++. -||+-...+| |.+.+.+..|+
T Consensus 242 y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 242 YRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred hhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 99876543 333 5999988887 66666665554
No 111
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.02 E-value=8.5e-09 Score=97.40 Aligned_cols=119 Identities=16% Similarity=0.204 Sum_probs=91.1
Q ss_pred CCceEEEee-CCeeEEEEE--cCCCCCCcEEEeCCCCCChHHHH------HHHHHHhhCCcEEEEecCCCC---------
Q 015755 17 QVPLHKIPI-GTKQWRYYD--FGPKVVPPLICLPGTAGTAEVYY------KQIMALSMKGYRVISVDIPRV--------- 78 (401)
Q Consensus 17 ~~~~~~~~~-~~~~l~y~~--~G~~~~p~vvllHG~~~~~~~~~------~~~~~L~~~g~~Vi~~D~pG~--------- 78 (401)
+.+.+.+++ ||..+.... .+.+.+|+|++.||+.+++..|. .+...|+++||.|..-..||.
T Consensus 47 ~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l 126 (403)
T KOG2624|consen 47 PVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKL 126 (403)
T ss_pred ceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhccc
Confidence 466777777 565544433 33356899999999999999984 345678889999999999984
Q ss_pred ----------CChH-----HHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCc---ccceEEEecCCCCC
Q 015755 79 ----------WNHH-----EWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPR---RVRSLVLSNTFLDT 135 (401)
Q Consensus 79 ----------~s~~-----~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~---~V~~lvli~~~~~~ 135 (401)
++.+ |+.+.|..+++.-+.++++.||||.|+.....++...|+ +|+..++++|....
T Consensus 127 ~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~ 201 (403)
T KOG2624|consen 127 SPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFP 201 (403)
T ss_pred CCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhh
Confidence 2333 445555666666678899999999999999988888775 79999999997643
No 112
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.01 E-value=7.8e-09 Score=89.89 Aligned_cols=213 Identities=15% Similarity=0.146 Sum_probs=128.5
Q ss_pred eCCeeEEEEEc----CCCCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCCCh-------------------
Q 015755 25 IGTKQWRYYDF----GPKVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWNH------------------- 81 (401)
Q Consensus 25 ~~~~~l~y~~~----G~~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~s~------------------- 81 (401)
.+|.+|+-... +.+..|.||-.||++++...|..++..-+ .||.|+.+|.||.++.
T Consensus 64 ~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~wa~-~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtr 142 (321)
T COG3458 64 YGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHWAV-AGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTR 142 (321)
T ss_pred cCCceEEEEEEeecccCCccceEEEEeeccCCCCCccccccccc-cceeEEEEecccCCCccccCCCCCCCCcCCceeEe
Confidence 35555544322 22346899999999999998888776555 6999999999996321
Q ss_pred ---------------HHHHHHHHHHH--HHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCc
Q 015755 82 ---------------HEWIQAFEKFL--DAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPW 144 (401)
Q Consensus 82 ---------------~~~a~dl~~~l--~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~ 144 (401)
.+.+..+..++ .....+++.+.|.|.||.+++.+|+..| ++++++.+-|+...-.......
T Consensus 143 GilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~r~i~~~- 220 (321)
T COG3458 143 GILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDFPRAIELA- 220 (321)
T ss_pred ecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccchhheeec-
Confidence 12222222222 2234468999999999999999998876 7999999988765432211110
Q ss_pred ccccccchhhHHHHHHhhccCCCCCCCchhhhHHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCC
Q 015755 145 APIVSWTPSFLLKRYVLTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYC 224 (401)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~ 224 (401)
..-+...+..++... ... .......+... + ...-+..++.|+|+..|--| .
T Consensus 221 ----~~~~ydei~~y~k~h---------------------~~~-e~~v~~TL~yf-D-~~n~A~RiK~pvL~svgL~D-~ 271 (321)
T COG3458 221 ----TEGPYDEIQTYFKRH---------------------DPK-EAEVFETLSYF-D-IVNLAARIKVPVLMSVGLMD-P 271 (321)
T ss_pred ----ccCcHHHHHHHHHhc---------------------Cch-HHHHHHHHhhh-h-hhhHHHhhccceEEeecccC-C
Confidence 000000111111110 000 11111111110 0 01112347789999999999 6
Q ss_pred CCcHHHHHHHHHHcCC-CeEEEecCCCCCCCcCChHHHHHHHHHHHhhc
Q 015755 225 ATSQQLKDQLSERYSG-ARQAYMKTGGEFPFLSRPDEVNLHLQLHLRRV 272 (401)
Q Consensus 225 ~~~~~~~~~~~~~~~~-~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~~~ 272 (401)
++|+..+-.+...++. .++.+++.-+|. +-|.-.++.+..|++..
T Consensus 272 vcpPstqFA~yN~l~~~K~i~iy~~~aHe---~~p~~~~~~~~~~l~~l 317 (321)
T COG3458 272 VCPPSTQFAAYNALTTSKTIEIYPYFAHE---GGPGFQSRQQVHFLKIL 317 (321)
T ss_pred CCCChhhHHHhhcccCCceEEEeeccccc---cCcchhHHHHHHHHHhh
Confidence 8999988888888875 566778876775 34555556666777643
No 113
>PRK04940 hypothetical protein; Provisional
Probab=98.99 E-value=5.7e-08 Score=81.13 Aligned_cols=170 Identities=16% Similarity=0.092 Sum_probs=96.6
Q ss_pred EEEeCCCCCChHH--HHHHHHHHhhCCcEEEEecCCCCCChHHHHHHHHHHHHHh-C---CceEEEEEEchhHHHHHHHH
Q 015755 43 LICLPGTAGTAEV--YYKQIMALSMKGYRVISVDIPRVWNHHEWIQAFEKFLDAI-D---VHHIHLYGTSLGGFLAQLFA 116 (401)
Q Consensus 43 vvllHG~~~~~~~--~~~~~~~L~~~g~~Vi~~D~pG~~s~~~~a~dl~~~l~~l-~---~~~v~lvGhS~Gg~ia~~~A 116 (401)
||++||+.++..+ .....-.....+.+++ +++. ....+..+.+...+..+ . .+++.|||+|+||+.|..+|
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~~p~~~~~--~l~~-~~P~~a~~~l~~~i~~~~~~~~~~~~~liGSSLGGyyA~~La 78 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFIDPDVRLI--SYST-LHPKHDMQHLLKEVDKMLQLSDDERPLICGVGLGGYWAERIG 78 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheeeCCCCeEE--ECCC-CCHHHHHHHHHHHHHHhhhccCCCCcEEEEeChHHHHHHHHH
Confidence 7999999998887 5332221112345555 5552 23333344555555431 1 25799999999999999999
Q ss_pred HhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCCCCCCCchhhhHHHHHHhhhhcCHHHHHHHh
Q 015755 117 QHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRL 196 (401)
Q Consensus 117 ~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (401)
.++. -..|||||...+... +..+.. .. ..+. ......... +
T Consensus 79 ~~~g---~~aVLiNPAv~P~~~-----------------L~~~ig----~~--~~y~-~~~~~h~~e------------L 119 (180)
T PRK04940 79 FLCG---IRQVIFNPNLFPEEN-----------------MEGKID----RP--EEYA-DIATKCVTN------------F 119 (180)
T ss_pred HHHC---CCEEEECCCCChHHH-----------------HHHHhC----CC--cchh-hhhHHHHHH------------h
Confidence 9986 478999997665321 111110 00 0000 011111111 1
Q ss_pred hhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCC-eEEEecCCCCCCCcCChHHHHHHHHHHHh
Q 015755 197 TLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGA-RQAYMKTGGEFPFLSRPDEVNLHLQLHLR 270 (401)
Q Consensus 197 ~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~-~~~~i~~~GH~~~~e~p~~v~~~i~~fl~ 270 (401)
. ...+...+++..+.|..+-..+.. +.+.+. ++.+.+|+.|-+ ++-++....|.+|++
T Consensus 120 ~----------~~~p~r~~vllq~gDEvLDyr~a~----~~y~~~y~~~v~~GGdH~f--~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 120 R----------EKNRDRCLVILSRNDEVLDSQRTA----EELHPYYEIVWDEEQTHKF--KNISPHLQRIKAFKT 178 (180)
T ss_pred h----------hcCcccEEEEEeCCCcccCHHHHH----HHhccCceEEEECCCCCCC--CCHHHHHHHHHHHHh
Confidence 1 012223688889999643333333 334455 788888888864 555678888888885
No 114
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.99 E-value=1.2e-08 Score=88.38 Aligned_cols=96 Identities=17% Similarity=0.263 Sum_probs=72.4
Q ss_pred CCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCCC--hHHHHHHHHHHHHHh--------------CCceEEEE
Q 015755 40 VPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWN--HHEWIQAFEKFLDAI--------------DVHHIHLY 103 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~s--~~~~a~dl~~~l~~l--------------~~~~v~lv 103 (401)
=|.|+|+||+......|..++.+++..||-|+++++-.-.. -.+-+++..++++.+ ++.++.++
T Consensus 46 yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~ 125 (307)
T PF07224_consen 46 YPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFPPDGQDEIKSAASVINWLPEGLQHVLPENVEANLSKLALS 125 (307)
T ss_pred ccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccCCCchHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEe
Confidence 47899999999999999999999999999999999865321 112222223333222 34589999
Q ss_pred EEchhHHHHHHHHHhCC--cccceEEEecCCCCC
Q 015755 104 GTSLGGFLAQLFAQHRP--RRVRSLVLSNTFLDT 135 (401)
Q Consensus 104 GhS~Gg~ia~~~A~~~P--~~V~~lvli~~~~~~ 135 (401)
|||.||-.|..+|..+- -.+.+||.++|....
T Consensus 126 GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 126 GHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred ecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 99999999999999773 258899999986543
No 115
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.99 E-value=2.9e-08 Score=86.64 Aligned_cols=94 Identities=19% Similarity=0.258 Sum_probs=70.6
Q ss_pred CCcEEEeCCCCCChHHHHHH--HHHHhh-CCcEEEEecCCC------C------------CChHHHHHHHHHHHHHhCC-
Q 015755 40 VPPLICLPGTAGTAEVYYKQ--IMALSM-KGYRVISVDIPR------V------------WNHHEWIQAFEKFLDAIDV- 97 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~~~~~--~~~L~~-~g~~Vi~~D~pG------~------------~s~~~~a~dl~~~l~~l~~- 97 (401)
.|.||++||.+++...+... +..|++ +||-|+.++... + ++...+++.+..+.++.++
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD 95 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNID 95 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccC
Confidence 57999999999999887553 334554 478899888531 1 2233444555556666555
Q ss_pred -ceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCC
Q 015755 98 -HHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFL 133 (401)
Q Consensus 98 -~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~ 133 (401)
.+|++.|+|.||+.+..++..||+.+.++..+++..
T Consensus 96 ~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 96 PSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred CCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 489999999999999999999999999988887753
No 116
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.98 E-value=4.8e-09 Score=92.11 Aligned_cols=91 Identities=21% Similarity=0.308 Sum_probs=61.8
Q ss_pred EEEeCCCCCC---hHHHHHHHHHHhh-CCcEEEEecCCCC--CChHHHHHHHHHHH----HH-----hCCceEEEEEEch
Q 015755 43 LICLPGTAGT---AEVYYKQIMALSM-KGYRVISVDIPRV--WNHHEWIQAFEKFL----DA-----IDVHHIHLYGTSL 107 (401)
Q Consensus 43 vvllHG~~~~---~~~~~~~~~~L~~-~g~~Vi~~D~pG~--~s~~~~a~dl~~~l----~~-----l~~~~v~lvGhS~ 107 (401)
||++||.+-. ......++..++. .|+.|+.+|+|=. ..+.+..+|+.+.+ ++ .+.++|+|+|+|.
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SA 80 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAPFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSA 80 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccccccccccccccceeeeccccccccccccceEEeeccc
Confidence 7999998753 3444556666664 7999999999843 34455555555444 33 3345899999999
Q ss_pred hHHHHHHHHHhCCc----ccceEEEecCCC
Q 015755 108 GGFLAQLFAQHRPR----RVRSLVLSNTFL 133 (401)
Q Consensus 108 Gg~ia~~~A~~~P~----~V~~lvli~~~~ 133 (401)
||.+++.++.+..+ .++++++++|..
T Consensus 81 Gg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 81 GGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp HHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred ccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 99999999986433 389999999954
No 117
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.98 E-value=2.6e-08 Score=88.94 Aligned_cols=191 Identities=15% Similarity=0.139 Sum_probs=111.9
Q ss_pred CCcEEEeCCCCCChHHHHHHHHHHh-hCCcE----EEEecCCCC-------------------------CChHHHHHHHH
Q 015755 40 VPPLICLPGTAGTAEVYYKQIMALS-MKGYR----VISVDIPRV-------------------------WNHHEWIQAFE 89 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~~~~~~~~L~-~~g~~----Vi~~D~pG~-------------------------~s~~~~a~dl~ 89 (401)
..|.||+||++++...+..++..+. +.+.. ++.++--|. .+....++.+.
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 4589999999999999999999997 54432 344444442 13445666666
Q ss_pred HHHHH----hCCceEEEEEEchhHHHHHHHHHhCCc-----ccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHH
Q 015755 90 KFLDA----IDVHHIHLYGTSLGGFLAQLFAQHRPR-----RVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYV 160 (401)
Q Consensus 90 ~~l~~----l~~~~v~lvGhS~Gg~ia~~~A~~~P~-----~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (401)
.+|.. .+++++.+|||||||..++.|+..+.. .|.++|.|+++........... . .
T Consensus 91 ~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~--~---------~---- 155 (255)
T PF06028_consen 91 KVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQ--N---------Q---- 155 (255)
T ss_dssp HHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-T--T---------T----
T ss_pred HHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccc--h---------h----
Confidence 66655 478899999999999999999988633 5899999998654321000000 0 0
Q ss_pred hhccCCCCCCCchhhhHHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeC------CCCCCCcHHHHHHH
Q 015755 161 LTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDT------NDYCATSQQLKDQL 234 (401)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~------~D~~~~~~~~~~~~ 234 (401)
..+.... ..... ..+...+.... ....-...+|-|.|. .| -.+|...+..+
T Consensus 156 -~~~~~~g-p~~~~---------------~~y~~l~~~~~-----~~~p~~i~VLnI~G~~~~g~~sD-G~V~~~Ss~sl 212 (255)
T PF06028_consen 156 -NDLNKNG-PKSMT---------------PMYQDLLKNRR-----KNFPKNIQVLNIYGDLEDGSNSD-GIVPNASSLSL 212 (255)
T ss_dssp -T-CSTT--BSS-----------------HHHHHHHHTHG-----GGSTTT-EEEEEEEESBTTCSBT-SSSBHHHHCTH
T ss_pred -hhhcccC-CcccC---------------HHHHHHHHHHH-----hhCCCCeEEEEEecccCCCCCCC-eEEeHHHHHHH
Confidence 0000000 00011 11111111100 011123348999998 66 68999999988
Q ss_pred HHHcCC----CeEEEec--CCCCCCCcCChHHHHHHHHHHH
Q 015755 235 SERYSG----ARQAYMK--TGGEFPFLSRPDEVNLHLQLHL 269 (401)
Q Consensus 235 ~~~~~~----~~~~~i~--~~GH~~~~e~p~~v~~~i~~fl 269 (401)
...+.+ .+-.++. ++.|.-..|++ +|.+.|.+||
T Consensus 213 ~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FL 252 (255)
T PF06028_consen 213 RYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFL 252 (255)
T ss_dssp HHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHH
T ss_pred HHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHh
Confidence 888854 2334554 46898877776 5888999987
No 118
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.97 E-value=7.2e-08 Score=82.79 Aligned_cols=226 Identities=16% Similarity=0.114 Sum_probs=114.1
Q ss_pred EEEee-CCeeEEEEEcCCC-----CCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCC----------CChHHH
Q 015755 21 HKIPI-GTKQWRYYDFGPK-----VVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRV----------WNHHEW 84 (401)
Q Consensus 21 ~~~~~-~~~~l~y~~~G~~-----~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~----------~s~~~~ 84 (401)
+.+.+ ++..|+....-|. ..++||+.+|++.....|..++.+|+..||+|+.+|--.| +++...
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms~g 84 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMSIG 84 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B-------------HHHH
T ss_pred ceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchHHh
Confidence 45566 5667777665542 3479999999999999999999999999999999998766 355666
Q ss_pred HHHHHHHHHH---hCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHh-hcCCcccccccchhhHHHHHH
Q 015755 85 IQAFEKFLDA---IDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFA-AAMPWAPIVSWTPSFLLKRYV 160 (401)
Q Consensus 85 a~dl~~~l~~---l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 160 (401)
.+++..+++. .|..++-||.-|+.|-+|+..|.+- .+.-||...+......-. +......+..+
T Consensus 85 ~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr~TLe~al~~Dyl~~~---------- 152 (294)
T PF02273_consen 85 KASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNLRDTLEKALGYDYLQLP---------- 152 (294)
T ss_dssp HHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHHHHHHHHSS-GGGS-----------
T ss_pred HHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeHHHHHHHHhccchhhcc----------
Confidence 6676665554 5778999999999999999999854 477788777655433211 11111100000
Q ss_pred hhccCCCCCCCchhhhHHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHc--
Q 015755 161 LTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERY-- 238 (401)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~-- 238 (401)
...+.......-..-..+.+....-...-..+..... ....+.+|++.+.+.+| .++....+..+...+
T Consensus 153 i~~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~--------~~k~l~iP~iaF~A~~D-~WV~q~eV~~~~~~~~s 223 (294)
T PF02273_consen 153 IEQLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTIN--------DMKRLSIPFIAFTANDD-DWVKQSEVEELLDNINS 223 (294)
T ss_dssp GGG--SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHH--------HHTT--S-EEEEEETT--TTS-HHHHHHHHTT-TT
T ss_pred hhhCCCcccccccccchHHHHHHHHHcCCccchhHHH--------HHhhCCCCEEEEEeCCC-ccccHHHHHHHHHhcCC
Confidence 0000000000000000111111111111111111111 12236789999999999 578888777777755
Q ss_pred CCCeEEEecCCCCCCCcCChHHHHHHHHHHHhhc
Q 015755 239 SGARQAYMKTGGEFPFLSRPDEVNLHLQLHLRRV 272 (401)
Q Consensus 239 ~~~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~~~ 272 (401)
+..+++.++|++|... |++- .++.|.+.+
T Consensus 224 ~~~klysl~Gs~HdL~-enl~----vlrnfy~sv 252 (294)
T PF02273_consen 224 NKCKLYSLPGSSHDLG-ENLV----VLRNFYQSV 252 (294)
T ss_dssp --EEEEEETT-SS-TT-SSHH----HHHHHHHHH
T ss_pred CceeEEEecCccchhh-hChH----HHHHHHHHH
Confidence 3578999999999874 4443 344555544
No 119
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.94 E-value=1.5e-08 Score=93.83 Aligned_cols=232 Identities=14% Similarity=0.123 Sum_probs=136.2
Q ss_pred CCcEEEeCCCCCChHHH-----HHHHHHHhhCCcEEEEecCCCC------CChHHHH-----HHHHHHHHHhCCceEEEE
Q 015755 40 VPPLICLPGTAGTAEVY-----YKQIMALSMKGYRVISVDIPRV------WNHHEWI-----QAFEKFLDAIDVHHIHLY 103 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~~-----~~~~~~L~~~g~~Vi~~D~pG~------~s~~~~a-----~dl~~~l~~l~~~~v~lv 103 (401)
++|+|++|-+-.....| ..++..|.++|+.|..+++++- -+.++++ +.+..+.+..+.++|.++
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~~Inli 186 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQKDINLI 186 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCcccccee
Confidence 56899999998776655 3567888889999999999864 2444444 556666677788999999
Q ss_pred EEchhHHHHHHHHHhCCcc-cceEEEecCCCCChhHhhcCC------------cccccccchhhHHHHH-----------
Q 015755 104 GTSLGGFLAQLFAQHRPRR-VRSLVLSNTFLDTHSFAAAMP------------WAPIVSWTPSFLLKRY----------- 159 (401)
Q Consensus 104 GhS~Gg~ia~~~A~~~P~~-V~~lvli~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~----------- 159 (401)
|++.||.++..+++.++.+ |+++++..+..+......... -......++...+...
T Consensus 187 GyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrpndliw 266 (445)
T COG3243 187 GYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRPNDLIW 266 (445)
T ss_pred eEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCccccch
Confidence 9999999999999999887 999998877654322100000 0000011111111111
Q ss_pred --HhhccCCCCCCCchhhhHHHHHHhhhhcCHHHHHHHh------------hhhcccccccccccCCcEEEEEeCCCCCC
Q 015755 160 --VLTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRL------------TLTADAASVGNLLLSDSHITIMDTNDYCA 225 (401)
Q Consensus 160 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~i~~Pvlli~G~~D~~~ 225 (401)
+...+..+.. + ......++...-.++........+ ........++...++||++.+.+++| .+
T Consensus 267 ~~fV~nyl~ge~-p-l~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~pvy~~a~~~D-hI 343 (445)
T COG3243 267 NYFVNNYLDGEQ-P-LPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCPVYNLAAEED-HI 343 (445)
T ss_pred HHHHHHhcCCCC-C-CchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEECCEEechhhcccceEEEeeccc-cc
Confidence 1111111000 0 000111111111111111111111 11122233445568999999999999 69
Q ss_pred CcHHHHHHHHHHcCCCeEEEecCCCCCCCcCC-hHH--------HHHHHHHHHhhccC
Q 015755 226 TSQQLKDQLSERYSGARQAYMKTGGEFPFLSR-PDE--------VNLHLQLHLRRVGV 274 (401)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~-p~~--------v~~~i~~fl~~~~~ 274 (401)
+|.+.....++.+++-...++-++||...+-+ |.. ....+..|+.+...
T Consensus 344 ~P~~Sv~~g~~l~~g~~~f~l~~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a~~ 401 (445)
T COG3243 344 APWSSVYLGARLLGGEVTFVLSRSGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGAKE 401 (445)
T ss_pred CCHHHHHHHHHhcCCceEEEEecCceEEEEeCCcchhhhhcCCCCcchHHHHHHhhcc
Confidence 99999999999998844445557999766544 221 22356777766543
No 120
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.93 E-value=1.4e-07 Score=75.55 Aligned_cols=169 Identities=13% Similarity=0.137 Sum_probs=116.6
Q ss_pred cEEEeCCCCCChH--HHHHHHHHHhhCCcEEEEecCCCC--------------CC-hHHHHHHHHHHHHHhCCceEEEEE
Q 015755 42 PLICLPGTAGTAE--VYYKQIMALSMKGYRVISVDIPRV--------------WN-HHEWIQAFEKFLDAIDVHHIHLYG 104 (401)
Q Consensus 42 ~vvllHG~~~~~~--~~~~~~~~L~~~g~~Vi~~D~pG~--------------~s-~~~~a~dl~~~l~~l~~~~v~lvG 104 (401)
+||+-||.+.+.+ .....+..|+.+|+.|..|++|-. ++ ..++...+.++...+...+.++-|
T Consensus 16 tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi~GG 95 (213)
T COG3571 16 TILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLIIGG 95 (213)
T ss_pred EEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCceeecc
Confidence 7999999998765 456677889989999999998632 12 357777788888877777999999
Q ss_pred EchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCCCCCCCchhhhHHHHHHhh
Q 015755 105 TSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHDGPHEPFIADSVDFVVCQV 184 (401)
Q Consensus 105 hS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (401)
+||||-++...|..--..|++|++++-+..+++-.....
T Consensus 96 kSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe~~R----------------------------------------- 134 (213)
T COG3571 96 KSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPEQLR----------------------------------------- 134 (213)
T ss_pred ccccchHHHHHHHhhcCCcceEEEecCccCCCCCcccch-----------------------------------------
Confidence 999999999988876556999999986544332110000
Q ss_pred hhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEEEecCCCCCCCcC--------
Q 015755 185 ETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFLS-------- 256 (401)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e-------- 256 (401)
. .- ..-+++|+++++|+.| .+-..+.+... ..-+..+++++.++.|.+--.
T Consensus 135 ----t----~H-----------L~gl~tPtli~qGtrD-~fGtr~~Va~y-~ls~~iev~wl~~adHDLkp~k~vsgls~ 193 (213)
T COG3571 135 ----T----EH-----------LTGLKTPTLITQGTRD-EFGTRDEVAGY-ALSDPIEVVWLEDADHDLKPRKLVSGLST 193 (213)
T ss_pred ----h----hh-----------ccCCCCCeEEeecccc-cccCHHHHHhh-hcCCceEEEEeccCccccccccccccccH
Confidence 0 00 1126789999999999 46555544222 122467999999999965321
Q ss_pred --ChHHHHHHHHHHHhhc
Q 015755 257 --RPDEVNLHLQLHLRRV 272 (401)
Q Consensus 257 --~p~~v~~~i~~fl~~~ 272 (401)
+-...++.|..|+.++
T Consensus 194 ~~hL~~~A~~va~~~~~l 211 (213)
T COG3571 194 ADHLKTLAEQVAGWARRL 211 (213)
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 1234456666666553
No 121
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.89 E-value=3.4e-08 Score=82.62 Aligned_cols=93 Identities=19% Similarity=0.271 Sum_probs=76.0
Q ss_pred cEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC----ChHHHHHHHHHHHHHh----CCceEEEEEEchhHHHHH
Q 015755 42 PLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW----NHHEWIQAFEKFLDAI----DVHHIHLYGTSLGGFLAQ 113 (401)
Q Consensus 42 ~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~----s~~~~a~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~ 113 (401)
.+||+-|=++-...=..+...|+++|+.|+.+|-+-|+ +.++.+.|+..++++. +.++++|||.|+|+-+.-
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP 83 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSERTPEQTAADLARIIRHYRARWGRKRVVLIGYSFGADVLP 83 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhCCHHHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhHH
Confidence 57888888877654456788999999999999988764 6788888888888664 667999999999999888
Q ss_pred HHHHhCCc----ccceEEEecCCCC
Q 015755 114 LFAQHRPR----RVRSLVLSNTFLD 134 (401)
Q Consensus 114 ~~A~~~P~----~V~~lvli~~~~~ 134 (401)
....+.|. +|..++|+++...
T Consensus 84 ~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 84 FIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred HHHhhCCHHHHhheeEEEEeccCCc
Confidence 77777764 7899999998543
No 122
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.89 E-value=6.8e-08 Score=90.25 Aligned_cols=98 Identities=21% Similarity=0.210 Sum_probs=67.1
Q ss_pred CCCcEEEeCCCCC---ChHHHHHHH-HHHhhCCcEEEEecCCCC--CC----hHHHHHHHHHHHHH---hC--CceEEEE
Q 015755 39 VVPPLICLPGTAG---TAEVYYKQI-MALSMKGYRVISVDIPRV--WN----HHEWIQAFEKFLDA---ID--VHHIHLY 103 (401)
Q Consensus 39 ~~p~vvllHG~~~---~~~~~~~~~-~~L~~~g~~Vi~~D~pG~--~s----~~~~a~dl~~~l~~---l~--~~~v~lv 103 (401)
..|+||++||.+- +.......+ ..+...|+.|+.+|+|=- .. +++..+.+..+.++ ++ .+++.++
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~ 157 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPFPAALEDAYAAYRWLRANAAELGIDPSRIAVA 157 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCCCchHHHHHHHHHHHHhhhHhhCCCccceEEE
Confidence 4689999999874 334443444 444557999999999753 23 34433333333333 23 4689999
Q ss_pred EEchhHHHHHHHHHhCCc----ccceEEEecCCCCCh
Q 015755 104 GTSLGGFLAQLFAQHRPR----RVRSLVLSNTFLDTH 136 (401)
Q Consensus 104 GhS~Gg~ia~~~A~~~P~----~V~~lvli~~~~~~~ 136 (401)
|+|.||.+++.++..-.+ ...+.+++.|..+..
T Consensus 158 GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 158 GDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLT 194 (312)
T ss_pred ecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCc
Confidence 999999999998886443 468899999876554
No 123
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.88 E-value=9.4e-09 Score=97.72 Aligned_cols=93 Identities=24% Similarity=0.362 Sum_probs=58.6
Q ss_pred CCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCC------C---------C-------------h------H--
Q 015755 39 VVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRV------W---------N-------------H------H-- 82 (401)
Q Consensus 39 ~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~------~---------s-------------~------~-- 82 (401)
.-|+|||-||++++...|..++..|+.+||-|+++|.|.. . . . +
T Consensus 99 ~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEF 178 (379)
T ss_dssp -EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHH
T ss_pred CCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHH
Confidence 3589999999999999999999999999999999999853 0 0 0 0
Q ss_pred -----H---HHHHHHHHHHHh--------------------------CCceEEEEEEchhHHHHHHHHHhCCcccceEEE
Q 015755 83 -----E---WIQAFEKFLDAI--------------------------DVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVL 128 (401)
Q Consensus 83 -----~---~a~dl~~~l~~l--------------------------~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvl 128 (401)
+ -++++..+++.+ +..++.++|||+||..++..+.+. .++++.|+
T Consensus 179 ~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~ 257 (379)
T PF03403_consen 179 ELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGIL 257 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEE
Confidence 0 022222232221 234799999999999999888776 67999999
Q ss_pred ecCC
Q 015755 129 SNTF 132 (401)
Q Consensus 129 i~~~ 132 (401)
+++.
T Consensus 258 LD~W 261 (379)
T PF03403_consen 258 LDPW 261 (379)
T ss_dssp ES--
T ss_pred eCCc
Confidence 9984
No 124
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.86 E-value=1.5e-07 Score=97.27 Aligned_cols=76 Identities=13% Similarity=0.147 Sum_probs=60.7
Q ss_pred HHHHHhhCCcEEEEecCCCCCCh--------HHHHHHHHHHHHHhC--------------------CceEEEEEEchhHH
Q 015755 59 QIMALSMKGYRVISVDIPRVWNH--------HEWIQAFEKFLDAID--------------------VHHIHLYGTSLGGF 110 (401)
Q Consensus 59 ~~~~L~~~g~~Vi~~D~pG~~s~--------~~~a~dl~~~l~~l~--------------------~~~v~lvGhS~Gg~ 110 (401)
....|..+||.|+.+|.||.+.+ .+-.+|..++|+.+. ..+|.++|.|+||.
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~ 350 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGT 350 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHH
Confidence 44677878999999999998532 344566666666654 35899999999999
Q ss_pred HHHHHHHhCCcccceEEEecCCCC
Q 015755 111 LAQLFAQHRPRRVRSLVLSNTFLD 134 (401)
Q Consensus 111 ia~~~A~~~P~~V~~lvli~~~~~ 134 (401)
+++.+|...|..++++|.+++...
T Consensus 351 ~~~~aAa~~pp~LkAIVp~a~is~ 374 (767)
T PRK05371 351 LPNAVATTGVEGLETIIPEAAISS 374 (767)
T ss_pred HHHHHHhhCCCcceEEEeeCCCCc
Confidence 999999999999999999887654
No 125
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.81 E-value=1.2e-07 Score=87.91 Aligned_cols=98 Identities=22% Similarity=0.284 Sum_probs=72.7
Q ss_pred CCCcEEEeCCCCC-----ChHHHHHHHHHHhh-CCcEEEEecCCCC------CChHHHHHHHHHHHHH------hCCceE
Q 015755 39 VVPPLICLPGTAG-----TAEVYYKQIMALSM-KGYRVISVDIPRV------WNHHEWIQAFEKFLDA------IDVHHI 100 (401)
Q Consensus 39 ~~p~vvllHG~~~-----~~~~~~~~~~~L~~-~g~~Vi~~D~pG~------~s~~~~a~dl~~~l~~------l~~~~v 100 (401)
..|.||++||.|- +...|..+...++. .+..|+++|+|=- ..+++-.+.+.-+.++ .+.++|
T Consensus 89 ~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv 168 (336)
T KOG1515|consen 89 KLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPAAYDDGWAALKWVLKNSWLKLGADPSRV 168 (336)
T ss_pred CceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCccchHHHHHHHHHHHhHHHHhCCCcccE
Confidence 4578999999874 24467777777743 4789999999742 2456666665555553 355689
Q ss_pred EEEEEchhHHHHHHHHHhC------CcccceEEEecCCCCCh
Q 015755 101 HLYGTSLGGFLAQLFAQHR------PRRVRSLVLSNTFLDTH 136 (401)
Q Consensus 101 ~lvGhS~Gg~ia~~~A~~~------P~~V~~lvli~~~~~~~ 136 (401)
+|+|-|.||.+|..+|.+. +-+++|.|++-|.....
T Consensus 169 ~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 169 FLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGT 210 (336)
T ss_pred EEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCC
Confidence 9999999999999888763 35799999999976543
No 126
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.80 E-value=3e-07 Score=78.11 Aligned_cols=164 Identities=20% Similarity=0.255 Sum_probs=108.9
Q ss_pred CCcEEEeCCCCCChHHHHHHH----HHHhhCCcEEEEecCCCC-------------------------------------
Q 015755 40 VPPLICLPGTAGTAEVYYKQI----MALSMKGYRVISVDIPRV------------------------------------- 78 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~~~~~~----~~L~~~g~~Vi~~D~pG~------------------------------------- 78 (401)
.+.|||+||+-.+...|..-. ..|. +-+.++.+|.|--
T Consensus 5 k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~-k~~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~~ 83 (230)
T KOG2551|consen 5 KLRVLCLHGFRQSGKVFSEKTGSLRKLLK-KLAELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASFT 83 (230)
T ss_pred CceEEEecchhhccHHHHHHhhhHHHHHH-hhheEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccccc
Confidence 568999999999999886543 2333 3478888887720
Q ss_pred --CChHHHHHHHHHHHHHhCCceEE-EEEEchhHHHHHHHHHhCC------c--ccceEEEecCCCCChhHhhcCCcccc
Q 015755 79 --WNHHEWIQAFEKFLDAIDVHHIH-LYGTSLGGFLAQLFAQHRP------R--RVRSLVLSNTFLDTHSFAAAMPWAPI 147 (401)
Q Consensus 79 --~s~~~~a~dl~~~l~~l~~~~v~-lvGhS~Gg~ia~~~A~~~P------~--~V~~lvli~~~~~~~~~~~~~~~~~~ 147 (401)
...+.-.+.|.+.+...| ++. |+|+|-|+.++..++.... + .++=+|+++++.....
T Consensus 84 ~~~~~eesl~yl~~~i~enG--PFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~---------- 151 (230)
T KOG2551|consen 84 EYFGFEESLEYLEDYIKENG--PFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSK---------- 151 (230)
T ss_pred cccChHHHHHHHHHHHHHhC--CCccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcc----------
Confidence 123445566666666665 454 8999999999998887211 1 2455666665422110
Q ss_pred cccchhhHHHHHHhhccCCCCCCCchhhhHHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCc
Q 015755 148 VSWTPSFLLKRYVLTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATS 227 (401)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~ 227 (401)
.+.. ..-...+.+|.|.|.|+.| .+++
T Consensus 152 -------------------------------------------~~~~---------~~~~~~i~~PSLHi~G~~D-~iv~ 178 (230)
T KOG2551|consen 152 -------------------------------------------KLDE---------SAYKRPLSTPSLHIFGETD-TIVP 178 (230)
T ss_pred -------------------------------------------hhhh---------hhhccCCCCCeeEEecccc-eeec
Confidence 0000 0001247889999999999 6899
Q ss_pred HHHHHHHHHHcCCCeEEEecCCCCCCCcCChHHHHHHHHHHHhhc
Q 015755 228 QQLKDQLSERYSGARQAYMKTGGEFPFLSRPDEVNLHLQLHLRRV 272 (401)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~~~ 272 (401)
....+.+++.+++..++.- .+||++.-.. ...+.|.+|++..
T Consensus 179 ~~~s~~L~~~~~~a~vl~H-pggH~VP~~~--~~~~~i~~fi~~~ 220 (230)
T KOG2551|consen 179 SERSEQLAESFKDATVLEH-PGGHIVPNKA--KYKEKIADFIQSF 220 (230)
T ss_pred chHHHHHHHhcCCCeEEec-CCCccCCCch--HHHHHHHHHHHHH
Confidence 9999999999999855444 5999886554 5566666666654
No 127
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.80 E-value=8.9e-07 Score=76.26 Aligned_cols=226 Identities=12% Similarity=0.119 Sum_probs=133.0
Q ss_pred CCCcEEEeCCCCCChHHHHHHHHHHhhC---CcEEEEecCCCC------------------CChHHHHHHHHHHHHHhCC
Q 015755 39 VVPPLICLPGTAGTAEVYYKQIMALSMK---GYRVISVDIPRV------------------WNHHEWIQAFEKFLDAIDV 97 (401)
Q Consensus 39 ~~p~vvllHG~~~~~~~~~~~~~~L~~~---g~~Vi~~D~pG~------------------~s~~~~a~dl~~~l~~l~~ 97 (401)
+++.|++++|.+|...-|.+++..|..+ .+.++.+-.-|| ++.++.++--.++++..-.
T Consensus 28 ~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~P 107 (301)
T KOG3975|consen 28 DKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYVP 107 (301)
T ss_pred CceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhCC
Confidence 5678999999999999998888877643 256887777776 3566777777778876533
Q ss_pred --ceEEEEEEchhHHHHHHHHHhC--CcccceEEEecCCCCC-----hhH--hhcCCcc-------c--ccccchhhHHH
Q 015755 98 --HHIHLYGTSLGGFLAQLFAQHR--PRRVRSLVLSNTFLDT-----HSF--AAAMPWA-------P--IVSWTPSFLLK 157 (401)
Q Consensus 98 --~~v~lvGhS~Gg~ia~~~A~~~--P~~V~~lvli~~~~~~-----~~~--~~~~~~~-------~--~~~~~~~~~~~ 157 (401)
.+++++|||.|+++.+.+.... --.|.+.+++=|.... -++ .....+. . +....+.+...
T Consensus 108 k~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~~ir~ 187 (301)
T KOG3975|consen 108 KDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPGFIRF 187 (301)
T ss_pred CCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChHHHHH
Confidence 4899999999999999988743 2257888887764311 110 0000000 0 11111222111
Q ss_pred HHHhhccCC-CCCCCchhhh----HHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHH
Q 015755 158 RYVLTGIHD-GPHEPFIADS----VDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKD 232 (401)
Q Consensus 158 ~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~ 232 (401)
-+....+.. .....+.... ...+.+....+..+.+..-..... ..... -.+.+.+.+|.+| .++|.+..+
T Consensus 188 ~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~--e~~ee--n~d~l~Fyygt~D-gW~p~~~~d 262 (301)
T KOG3975|consen 188 ILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDI--EYCEE--NLDSLWFYYGTND-GWVPSHYYD 262 (301)
T ss_pred HHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHH--HHHHh--cCcEEEEEccCCC-CCcchHHHH
Confidence 111111111 1111222111 112222222233333322222110 00111 1244778899999 799999999
Q ss_pred HHHHHcCCC--eEEEecCCCCCCCcCChHHHHHHHHHHHh
Q 015755 233 QLSERYSGA--RQAYMKTGGEFPFLSRPDEVNLHLQLHLR 270 (401)
Q Consensus 233 ~~~~~~~~~--~~~~i~~~GH~~~~e~p~~v~~~i~~fl~ 270 (401)
.+.+.+|.. ++-+ +++-|.+...+.+..+.++.+.++
T Consensus 263 ~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~~ 301 (301)
T KOG3975|consen 263 YYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMIQ 301 (301)
T ss_pred HHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHhhC
Confidence 999999864 4444 679999999999999988887653
No 128
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.79 E-value=3.4e-07 Score=83.79 Aligned_cols=109 Identities=17% Similarity=0.212 Sum_probs=73.1
Q ss_pred CCeeEEEEEcCC-----CCCCcEEEeCCCCCChHH-HHHH--H-------HHHhhCCcEEEEecCCCCCC--------hH
Q 015755 26 GTKQWRYYDFGP-----KVVPPLICLPGTAGTAEV-YYKQ--I-------MALSMKGYRVISVDIPRVWN--------HH 82 (401)
Q Consensus 26 ~~~~l~y~~~G~-----~~~p~vvllHG~~~~~~~-~~~~--~-------~~L~~~g~~Vi~~D~pG~~s--------~~ 82 (401)
||.+|....+-+ +.-|+||..|+++.+... .... . ..++++||.|+.+|.||.+. ..
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~~ 80 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMSP 80 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTSH
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCCh
Confidence 355555544432 345789999999976421 1111 1 12777999999999999853 34
Q ss_pred HHHHHHHHHHHHh---CC--ceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCC
Q 015755 83 EWIQAFEKFLDAI---DV--HHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLD 134 (401)
Q Consensus 83 ~~a~dl~~~l~~l---~~--~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~ 134 (401)
.-++|..++|+.+ .. .+|.++|.|++|..++.+|...|..+++++...+..+
T Consensus 81 ~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d 137 (272)
T PF02129_consen 81 NEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSD 137 (272)
T ss_dssp HHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SB
T ss_pred hHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCc
Confidence 5566666666554 22 3899999999999999999988889999999877544
No 129
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.75 E-value=1.6e-06 Score=84.81 Aligned_cols=115 Identities=26% Similarity=0.371 Sum_probs=79.3
Q ss_pred EEEeeC----CeeEEEEEcCC----CCCCcEEEeCCCCCChHHHHHHHH-----------HHh------hCCcEEEEecC
Q 015755 21 HKIPIG----TKQWRYYDFGP----KVVPPLICLPGTAGTAEVYYKQIM-----------ALS------MKGYRVISVDI 75 (401)
Q Consensus 21 ~~~~~~----~~~l~y~~~G~----~~~p~vvllHG~~~~~~~~~~~~~-----------~L~------~~g~~Vi~~D~ 75 (401)
-+++++ +..++|..... .+.|.||+++|.++.+..+-.+.+ .+. .+..+++.+|.
T Consensus 50 Gy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDq 129 (462)
T PTZ00472 50 GYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQ 129 (462)
T ss_pred EEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeC
Confidence 345553 45677765553 356899999999998876522210 111 03478999998
Q ss_pred C-CCC-----------ChHHHHHHHHHHHHHh-------CCceEEEEEEchhHHHHHHHHHhC----------CcccceE
Q 015755 76 P-RVW-----------NHHEWIQAFEKFLDAI-------DVHHIHLYGTSLGGFLAQLFAQHR----------PRRVRSL 126 (401)
Q Consensus 76 p-G~~-----------s~~~~a~dl~~~l~~l-------~~~~v~lvGhS~Gg~ia~~~A~~~----------P~~V~~l 126 (401)
| |+| +.++.++|+.++++.+ +..+++|+|||+||.++..+|.+. .-.++|+
T Consensus 130 P~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi 209 (462)
T PTZ00472 130 PAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGL 209 (462)
T ss_pred CCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEE
Confidence 7 432 3467888888888743 446899999999999998887752 1247899
Q ss_pred EEecCCCCC
Q 015755 127 VLSNTFLDT 135 (401)
Q Consensus 127 vli~~~~~~ 135 (401)
++.++...+
T Consensus 210 ~IGNg~~dp 218 (462)
T PTZ00472 210 AVGNGLTDP 218 (462)
T ss_pred EEeccccCh
Confidence 999887654
No 130
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.74 E-value=5.1e-08 Score=84.93 Aligned_cols=78 Identities=18% Similarity=0.299 Sum_probs=53.5
Q ss_pred CcEEEeCCCCC-ChHHHHHHHHHHhhCCcE---EEEecCCCCC-------------ChHHHHHHHHHHHHHhCCceEEEE
Q 015755 41 PPLICLPGTAG-TAEVYYKQIMALSMKGYR---VISVDIPRVW-------------NHHEWIQAFEKFLDAIDVHHIHLY 103 (401)
Q Consensus 41 p~vvllHG~~~-~~~~~~~~~~~L~~~g~~---Vi~~D~pG~~-------------s~~~~a~dl~~~l~~l~~~~v~lv 103 (401)
.||||+||.++ ....|..+.+.|.++||. |+++++-... +..++++.|..+++.-+. +|.||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 48999999999 557899999999999999 8999995432 113455666667777788 99999
Q ss_pred EEchhHHHHHHHHHhC
Q 015755 104 GTSLGGFLAQLFAQHR 119 (401)
Q Consensus 104 GhS~Gg~ia~~~A~~~ 119 (401)
||||||.++..+....
T Consensus 81 gHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG 96 (219)
T ss_dssp EETCHHHHHHHHHHHC
T ss_pred EcCCcCHHHHHHHHHc
Confidence 9999999988877643
No 131
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.71 E-value=9.8e-08 Score=79.65 Aligned_cols=185 Identities=14% Similarity=0.140 Sum_probs=109.7
Q ss_pred eEEEEEcCC-CCCCcEEEeCCCC---CChHHHHHHHHHHhhCCcEEEEecCCCCC---ChHHHH----HHHHHHHHHhC-
Q 015755 29 QWRYYDFGP-KVVPPLICLPGTA---GTAEVYYKQIMALSMKGYRVISVDIPRVW---NHHEWI----QAFEKFLDAID- 96 (401)
Q Consensus 29 ~l~y~~~G~-~~~p~vvllHG~~---~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~---s~~~~a----~dl~~~l~~l~- 96 (401)
+-.+-.+|+ ...+..||+||.. ++.+.+...+..+..+||+|..+++-=.. +.++.. .-+.-+++...
T Consensus 55 ~q~VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q~htL~qt~~~~~~gv~filk~~~n 134 (270)
T KOG4627|consen 55 RQLVDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQVHTLEQTMTQFTHGVNFILKYTEN 134 (270)
T ss_pred ceEEEEecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCcccccHHHHHHHHHHHHHHHHHhccc
Confidence 556677885 4567899999974 45566666666666689999999873221 333333 33344444443
Q ss_pred CceEEEEEEchhHHHHHHHHHh-CCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCCCCCCCchhh
Q 015755 97 VHHIHLYGTSLGGFLAQLFAQH-RPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHDGPHEPFIAD 175 (401)
Q Consensus 97 ~~~v~lvGhS~Gg~ia~~~A~~-~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (401)
.+.+.+-|||.|+.+|+.+..+ +..+|.|+++.++...... +........ -....+
T Consensus 135 ~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~E---------------------L~~te~g~d--lgLt~~ 191 (270)
T KOG4627|consen 135 TKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRE---------------------LSNTESGND--LGLTER 191 (270)
T ss_pred ceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHH---------------------HhCCccccc--cCcccc
Confidence 3456678999999999887654 4458999998887432211 111000000 000000
Q ss_pred hHHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEEEecCCCCCCCc
Q 015755 176 SVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFL 255 (401)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~ 255 (401)
.. +.. ....+....++.|++++.|.+|. -.-.+..+.++.....+++..+++.+|+-.+
T Consensus 192 ~a------------e~~--------Scdl~~~~~v~~~ilVv~~~~es-pklieQnrdf~~q~~~a~~~~f~n~~hy~I~ 250 (270)
T KOG4627|consen 192 NA------------ESV--------SCDLWEYTDVTVWILVVAAEHES-PKLIEQNRDFADQLRKASFTLFKNYDHYDII 250 (270)
T ss_pred hh------------hhc--------CccHHHhcCceeeeeEeeecccC-cHHHHhhhhHHHHhhhcceeecCCcchhhHH
Confidence 00 000 00001112255679999999994 2334555667777778999999999998655
Q ss_pred CC
Q 015755 256 SR 257 (401)
Q Consensus 256 e~ 257 (401)
++
T Consensus 251 ~~ 252 (270)
T KOG4627|consen 251 EE 252 (270)
T ss_pred HH
Confidence 43
No 132
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.71 E-value=5e-08 Score=85.55 Aligned_cols=150 Identities=15% Similarity=0.121 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHh-C--CceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHH
Q 015755 84 WIQAFEKFLDAI-D--VHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYV 160 (401)
Q Consensus 84 ~a~dl~~~l~~l-~--~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (401)
+.+...++|+.. . .++|.|+|.|.||-+|+.+|..+| .|+++|.++|............... ..++........
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~--~~lp~~~~~~~~ 81 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSS--KPLPYLPFDISK 81 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE----EE----B-GGG
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCC--ccCCcCCcChhh
Confidence 344445555444 2 258999999999999999999999 7999999998543211000000000 000000000000
Q ss_pred hhccCCCCCCCchhhhHHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHc--
Q 015755 161 LTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERY-- 238 (401)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~-- 238 (401)
... ...... ..................++...+++|+|+|.|++|..+.....++.+.+.+
T Consensus 82 ~~~---~~~~~~--------------~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~ 144 (213)
T PF08840_consen 82 FSW---NEPGLL--------------RSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKA 144 (213)
T ss_dssp -EE----TTS-E--------------E-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHC
T ss_pred cee---cCCcce--------------ehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHH
Confidence 000 000000 0000000001111222344555678999999999995444455555555543
Q ss_pred ---C-CCeEEEecCCCCCC
Q 015755 239 ---S-GARQAYMKTGGEFP 253 (401)
Q Consensus 239 ---~-~~~~~~i~~~GH~~ 253 (401)
+ +.+++.++++||++
T Consensus 145 ~~~~~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 145 AGFPHNVEHLSYPGAGHLI 163 (213)
T ss_dssp TT-----EEEEETTB-S--
T ss_pred hCCCCcceEEEcCCCCcee
Confidence 2 36888999999986
No 133
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.66 E-value=4.3e-07 Score=79.11 Aligned_cols=88 Identities=26% Similarity=0.327 Sum_probs=67.2
Q ss_pred EeCCCC--CChHHHHHHHHHHhhCCcEEEEecCCCCC-------ChHHHHHHHHHHHH-HhCCceEEEEEEchhHHHHHH
Q 015755 45 CLPGTA--GTAEVYYKQIMALSMKGYRVISVDIPRVW-------NHHEWIQAFEKFLD-AIDVHHIHLYGTSLGGFLAQL 114 (401)
Q Consensus 45 llHG~~--~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~-------s~~~~a~dl~~~l~-~l~~~~v~lvGhS~Gg~ia~~ 114 (401)
++|..+ ++...|..+...|. ..+.|+++|++|++ +.+++++.+...+. .....+++++|||+||.++..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~ 80 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALR-GRRDVSALPLPGFGPGEPLPASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHA 80 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcC-CCccEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHH
Confidence 556544 67778999999887 46999999999984 34566665554443 344568999999999999998
Q ss_pred HHHh---CCcccceEEEecCCC
Q 015755 115 FAQH---RPRRVRSLVLSNTFL 133 (401)
Q Consensus 115 ~A~~---~P~~V~~lvli~~~~ 133 (401)
++.+ .++.+.+++++++..
T Consensus 81 ~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 81 VAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHhCCCCCcEEEEEccCC
Confidence 8886 456799999998754
No 134
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.64 E-value=8.1e-08 Score=89.49 Aligned_cols=94 Identities=28% Similarity=0.379 Sum_probs=61.2
Q ss_pred CCCcEEEeCCCCCCh--HHHHH-HHHHHhh---CCcEEEEecCCCC----C-----ChHHHHHHHHHHHH----Hh--CC
Q 015755 39 VVPPLICLPGTAGTA--EVYYK-QIMALSM---KGYRVISVDIPRV----W-----NHHEWIQAFEKFLD----AI--DV 97 (401)
Q Consensus 39 ~~p~vvllHG~~~~~--~~~~~-~~~~L~~---~g~~Vi~~D~pG~----~-----s~~~~a~dl~~~l~----~l--~~ 97 (401)
++|++|++|||..+. ..|.. +...+.. .+++||++||... | ......+.|..+|. .. ..
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~~ 149 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVPP 149 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---G
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCCh
Confidence 578999999999988 35544 4454443 4799999999532 1 12233333444333 33 34
Q ss_pred ceEEEEEEchhHHHHHHHHHhCCc--ccceEEEecCC
Q 015755 98 HHIHLYGTSLGGFLAQLFAQHRPR--RVRSLVLSNTF 132 (401)
Q Consensus 98 ~~v~lvGhS~Gg~ia~~~A~~~P~--~V~~lvli~~~ 132 (401)
++++|||||+||.||-.++..... +|..++.++|.
T Consensus 150 ~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPA 186 (331)
T PF00151_consen 150 ENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPA 186 (331)
T ss_dssp GGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B
T ss_pred hHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcc
Confidence 689999999999999999988877 89999999985
No 135
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.59 E-value=2.6e-06 Score=88.06 Aligned_cols=212 Identities=19% Similarity=0.153 Sum_probs=130.4
Q ss_pred CceEEEeeCCeeEEEEEcCCC------CCCcEEEeCCCCCChH-------HHHHHHHHHhhCCcEEEEecCCCCC-----
Q 015755 18 VPLHKIPIGTKQWRYYDFGPK------VVPPLICLPGTAGTAE-------VYYKQIMALSMKGYRVISVDIPRVW----- 79 (401)
Q Consensus 18 ~~~~~~~~~~~~l~y~~~G~~------~~p~vvllHG~~~~~~-------~~~~~~~~L~~~g~~Vi~~D~pG~~----- 79 (401)
+....+..+|....+...-++ .=|.||.+||.+++.. .|... .....|+.|+.+|.||-+
T Consensus 498 ~~~~~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~ 575 (755)
T KOG2100|consen 498 VEFGKIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWD 575 (755)
T ss_pred ceeEEEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchh
Confidence 445667778888888776552 2367888899987332 24332 344469999999999852
Q ss_pred ------------ChHHHHHHHHHHHHHhC--CceEEEEEEchhHHHHHHHHHhCCcccce-EEEecCCCCChhHhhcCCc
Q 015755 80 ------------NHHEWIQAFEKFLDAID--VHHIHLYGTSLGGFLAQLFAQHRPRRVRS-LVLSNTFLDTHSFAAAMPW 144 (401)
Q Consensus 80 ------------s~~~~a~dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~-lvli~~~~~~~~~~~~~~~ 144 (401)
.+++....+..+++..- .+++.++|+|+||++++.++...|+.+.+ .+.++|..+..-...
T Consensus 576 ~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds---- 651 (755)
T KOG2100|consen 576 FRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDS---- 651 (755)
T ss_pred HHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeecc----
Confidence 44566666666666543 35899999999999999999999855554 499998654321000
Q ss_pred ccccccchhhHHHHHHhhccCCCCCCCchhhhHHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCc-EEEEEeCCCC
Q 015755 145 APIVSWTPSFLLKRYVLTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDS-HITIMDTNDY 223 (401)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-vlli~G~~D~ 223 (401)
....++ ...+... .. .+..... .. ....++.| .|++||+.|+
T Consensus 652 ---------~~tery-----mg~p~~~-----~~------------~y~e~~~----~~--~~~~~~~~~~LliHGt~Dd 694 (755)
T KOG2100|consen 652 ---------TYTERY-----MGLPSEN-----DK------------GYEESSV----SS--PANNIKTPKLLLIHGTEDD 694 (755)
T ss_pred ---------cccHhh-----cCCCccc-----cc------------hhhhccc----cc--hhhhhccCCEEEEEcCCcC
Confidence 000010 0000000 00 0000000 00 01112233 5999999995
Q ss_pred CCCcHHHHHHHHHHcC----CCeEEEecCCCCCCCcCCh-HHHHHHHHHHHhhcc
Q 015755 224 CATSQQLKDQLSERYS----GARQAYMKTGGEFPFLSRP-DEVNLHLQLHLRRVG 273 (401)
Q Consensus 224 ~~~~~~~~~~~~~~~~----~~~~~~i~~~GH~~~~e~p-~~v~~~i~~fl~~~~ 273 (401)
.++.+....+.+.+. ..++.++|+..|.+..-.. ..+...+..|+..+.
T Consensus 695 -nVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~ 748 (755)
T KOG2100|consen 695 -NVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCF 748 (755)
T ss_pred -CcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHc
Confidence 566666666665552 2688999999998765443 567788888888554
No 136
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.56 E-value=2.5e-07 Score=89.17 Aligned_cols=84 Identities=17% Similarity=0.199 Sum_probs=64.5
Q ss_pred CChHHHHHHHHHHhhCCcEEEEecCCCCC-------ChHHHHHH----HHHHHHHhCCceEEEEEEchhHHHHHHHHHhC
Q 015755 51 GTAEVYYKQIMALSMKGYRVISVDIPRVW-------NHHEWIQA----FEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHR 119 (401)
Q Consensus 51 ~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~-------s~~~~a~d----l~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~ 119 (401)
.....|..+++.|.+.||.+ ..|++|++ ..+++.++ ++.+.+..+.++++||||||||.++..++..+
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~ 183 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLH 183 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHC
Confidence 45678999999999888755 78999874 13344444 44455556778999999999999999999998
Q ss_pred Ccc----cceEEEecCCCCC
Q 015755 120 PRR----VRSLVLSNTFLDT 135 (401)
Q Consensus 120 P~~----V~~lvli~~~~~~ 135 (401)
|+. |+++|.++++...
T Consensus 184 p~~~~k~I~~~I~la~P~~G 203 (440)
T PLN02733 184 SDVFEKYVNSWIAIAAPFQG 203 (440)
T ss_pred CHhHHhHhccEEEECCCCCC
Confidence 864 7888999876443
No 137
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.54 E-value=9.7e-07 Score=78.41 Aligned_cols=99 Identities=18% Similarity=0.200 Sum_probs=66.4
Q ss_pred CCCcEEEeCCCCCChHHHHHHHHHHhh-CCc--EEEEecCCCCCChH----------HHHHHHHHHHHH----hCCceEE
Q 015755 39 VVPPLICLPGTAGTAEVYYKQIMALSM-KGY--RVISVDIPRVWNHH----------EWIQAFEKFLDA----IDVHHIH 101 (401)
Q Consensus 39 ~~p~vvllHG~~~~~~~~~~~~~~L~~-~g~--~Vi~~D~pG~~s~~----------~~a~dl~~~l~~----l~~~~v~ 101 (401)
++..+||+||+..+.+.-...+..+.. -+| .++.+.||..++.- .-...+..+|+. .+.++|+
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ 96 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRIH 96 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceEE
Confidence 467999999999987643222222221 223 79999999875432 223334444444 3567999
Q ss_pred EEEEchhHHHHHHHHHh----CC-----cccceEEEecCCCCChh
Q 015755 102 LYGTSLGGFLAQLFAQH----RP-----RRVRSLVLSNTFLDTHS 137 (401)
Q Consensus 102 lvGhS~Gg~ia~~~A~~----~P-----~~V~~lvli~~~~~~~~ 137 (401)
|++||||+.+.+..... .+ .++..+||++|..+...
T Consensus 97 ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~ 141 (233)
T PF05990_consen 97 ILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDV 141 (233)
T ss_pred EEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHH
Confidence 99999999999887553 22 36789999998766543
No 138
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.53 E-value=1.1e-07 Score=87.28 Aligned_cols=193 Identities=17% Similarity=0.139 Sum_probs=108.1
Q ss_pred CCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCC----------C--ChH-----HHHHHHHHHHH--------
Q 015755 39 VVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRV----------W--NHH-----EWIQAFEKFLD-------- 93 (401)
Q Consensus 39 ~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~----------~--s~~-----~~a~dl~~~l~-------- 93 (401)
.-|.||+-||.|.+...|..+.+.+++.||-|.++|.||- + +.. +-..|+..+|+
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~s 149 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTAS 149 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcC
Confidence 3588999999999999999999999999999999999993 1 001 11223332222
Q ss_pred -----HhCCceEEEEEEchhHHHHHHHHHhCCcccceEEE--------ecCCCCChhHhhcCCcccccccchhhHHHHHH
Q 015755 94 -----AIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVL--------SNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYV 160 (401)
Q Consensus 94 -----~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvl--------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (401)
++...+|.++|||+||+.++..+....+....+.- ..+...... ........+.+ ..
T Consensus 150 P~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~~~----~l~q~~av~~~------~~ 219 (365)
T COG4188 150 PALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLNGR----LLNQCAAVWLP------RQ 219 (365)
T ss_pred cccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcChh----hhccccccccc------hh
Confidence 22345899999999999999988765542211111 111110000 00000000000 00
Q ss_pred hhccCCCCCCCchhhhHHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcH-HHHHHHHHHcC
Q 015755 161 LTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQ-QLKDQLSERYS 239 (401)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~-~~~~~~~~~~~ 239 (401)
...+.+.. .+..+...-.............+..|++++.|..|. +.|. .........++
T Consensus 220 ~~~~rDpr-------------------iravvA~~p~~~~~Fg~tgl~~v~~P~~~~a~s~D~-~aP~~~~~~~~f~~l~ 279 (365)
T COG4188 220 AYDLRDPR-------------------IRAVVAINPALGMIFGTTGLVKVTDPVLLAAGSADG-FAPPVTEQIRPFGYLP 279 (365)
T ss_pred hhcccccc-------------------ceeeeeccCCcccccccccceeeecceeeecccccc-cCCcccccccccccCC
Confidence 00000000 000000000001111122334577899999999994 4443 34455566677
Q ss_pred CC--eEEEecCCCCCCCcCChHHH
Q 015755 240 GA--RQAYMKTGGEFPFLSRPDEV 261 (401)
Q Consensus 240 ~~--~~~~i~~~GH~~~~e~p~~v 261 (401)
+. .+..++++.|+-+++-.++.
T Consensus 280 g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 280 GALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred cchhheeecCCCccccccccCccc
Confidence 66 67889999999998877765
No 139
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.44 E-value=7.5e-06 Score=69.73 Aligned_cols=161 Identities=12% Similarity=0.120 Sum_probs=109.6
Q ss_pred EEeeCCeeEEEEEcCCCCCC-cEEEeCCCCCChHH-HHHHHHHHhhCCcEEEEecCC-CC-C----------------Ch
Q 015755 22 KIPIGTKQWRYYDFGPKVVP-PLICLPGTAGTAEV-YYKQIMALSMKGYRVISVDIP-RV-W----------------NH 81 (401)
Q Consensus 22 ~~~~~~~~l~y~~~G~~~~p-~vvllHG~~~~~~~-~~~~~~~L~~~g~~Vi~~D~p-G~-~----------------s~ 81 (401)
..+++|.. -|..|..+.+ .||.+-.+.+.... -+..+..++..||.|+.+|+. |- + +.
T Consensus 22 ~~~v~gld--aYv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~ 99 (242)
T KOG3043|consen 22 EEEVGGLD--AYVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSP 99 (242)
T ss_pred eEeecCee--EEEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCc
Confidence 34444444 3445654334 78888888776654 677888898889999999984 41 1 11
Q ss_pred HHHHHHHHHHH---HHhC-CceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHH
Q 015755 82 HEWIQAFEKFL---DAID-VHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLK 157 (401)
Q Consensus 82 ~~~a~dl~~~l---~~l~-~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (401)
+-.-.++..++ +..+ .+++-++|..|||-++..+....| .+.+.+..-|.....
T Consensus 100 ~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d~--------------------- 157 (242)
T KOG3043|consen 100 PKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVDS--------------------- 157 (242)
T ss_pred ccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCCh---------------------
Confidence 22233444444 3445 467889999999999988888877 577777665521100
Q ss_pred HHHhhccCCCCCCCchhhhHHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHH
Q 015755 158 RYVLTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSER 237 (401)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~ 237 (401)
. ....+++|++++.++.| .++|++....+.+.
T Consensus 158 --------------------------------~---------------D~~~vk~Pilfl~ae~D-~~~p~~~v~~~ee~ 189 (242)
T KOG3043|consen 158 --------------------------------A---------------DIANVKAPILFLFAELD-EDVPPKDVKAWEEK 189 (242)
T ss_pred --------------------------------h---------------HHhcCCCCEEEEeeccc-ccCCHHHHHHHHHH
Confidence 0 01136789999999999 68899888888877
Q ss_pred cC-----CCeEEEecCCCCCCC
Q 015755 238 YS-----GARQAYMKTGGEFPF 254 (401)
Q Consensus 238 ~~-----~~~~~~i~~~GH~~~ 254 (401)
+. +.++.++++-+|-.+
T Consensus 190 lk~~~~~~~~v~~f~g~~HGf~ 211 (242)
T KOG3043|consen 190 LKENPAVGSQVKTFSGVGHGFV 211 (242)
T ss_pred HhcCcccceeEEEcCCccchhh
Confidence 64 246999999999655
No 140
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.42 E-value=5.3e-06 Score=80.44 Aligned_cols=193 Identities=14% Similarity=0.115 Sum_probs=117.6
Q ss_pred CCcEEEeCCCCCC-----hHHHHHH--HHHHhhCCcEEEEecCCCC---------------C--ChHHHHHHHHHHHHHh
Q 015755 40 VPPLICLPGTAGT-----AEVYYKQ--IMALSMKGYRVISVDIPRV---------------W--NHHEWIQAFEKFLDAI 95 (401)
Q Consensus 40 ~p~vvllHG~~~~-----~~~~~~~--~~~L~~~g~~Vi~~D~pG~---------------~--s~~~~a~dl~~~l~~l 95 (401)
=|+++++-|.++- ...|... +..|+..||.|+.+|-||. | .+++.++-+.-+.++.
T Consensus 642 Yptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~ 721 (867)
T KOG2281|consen 642 YPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQT 721 (867)
T ss_pred CceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhc
Confidence 4799999998863 2223222 3467778999999999984 1 4678888888888887
Q ss_pred CC---ceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCCCCCCCc
Q 015755 96 DV---HHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHDGPHEPF 172 (401)
Q Consensus 96 ~~---~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (401)
|. ++|.+-|+|+||++++....++|+-++..|.-+|...- ..... ....++.. ........+
T Consensus 722 gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W---------~~YDT----gYTERYMg--~P~~nE~gY 786 (867)
T KOG2281|consen 722 GFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDW---------RLYDT----GYTERYMG--YPDNNEHGY 786 (867)
T ss_pred CcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceee---------eeecc----cchhhhcC--CCccchhcc
Confidence 54 68999999999999999999999988777766654321 11000 00011100 000000001
Q ss_pred hhhhHHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHc----CCCeEEEecC
Q 015755 173 IADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERY----SGARQAYMKT 248 (401)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~----~~~~~~~i~~ 248 (401)
....+. .....+ +. -+...|+|||--|. .+.......+...+ +.-++.++|+
T Consensus 787 ~agSV~------------~~Vekl---------pd--epnRLlLvHGliDE-NVHF~Hts~Lvs~lvkagKpyeL~IfP~ 842 (867)
T KOG2281|consen 787 GAGSVA------------GHVEKL---------PD--EPNRLLLVHGLIDE-NVHFAHTSRLVSALVKAGKPYELQIFPN 842 (867)
T ss_pred cchhHH------------HHHhhC---------CC--CCceEEEEeccccc-chhhhhHHHHHHHHHhCCCceEEEEccc
Confidence 000000 000111 11 12237999999995 55555444443332 4468999999
Q ss_pred CCCCCCc-CChHHHHHHHHHHHhh
Q 015755 249 GGEFPFL-SRPDEVNLHLQLHLRR 271 (401)
Q Consensus 249 ~GH~~~~-e~p~~v~~~i~~fl~~ 271 (401)
-.|.+-. |...-+...+..|+++
T Consensus 843 ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 843 ERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred cccccCCCccchhHHHHHHHHHhh
Confidence 9998754 3345566778888875
No 141
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.39 E-value=6.7e-06 Score=69.67 Aligned_cols=96 Identities=13% Similarity=0.231 Sum_probs=76.0
Q ss_pred CcEEEeCCCCCChHHH---HHHHHHHhhCCcEEEEecCCCC------CChHHHHHHHHHHHHHhCCc----eEEEEEEch
Q 015755 41 PPLICLPGTAGTAEVY---YKQIMALSMKGYRVISVDIPRV------WNHHEWIQAFEKFLDAIDVH----HIHLYGTSL 107 (401)
Q Consensus 41 p~vvllHG~~~~~~~~---~~~~~~L~~~g~~Vi~~D~pG~------~s~~~~a~dl~~~l~~l~~~----~v~lvGhS~ 107 (401)
..|||+-|++..--.+ ..+...|.+.+|.++-+-++.+ +++++-++|+..+++|++.. .|+|+|||.
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL~GhST 116 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVLVGHST 116 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccccccccHHHHHHHHHHhhccCcccceEEEecCc
Confidence 5789999998765433 4556778878999999998743 46889999999999988653 799999999
Q ss_pred hHHHHHHHHHh--CCcccceEEEecCCCCCh
Q 015755 108 GGFLAQLFAQH--RPRRVRSLVLSNTFLDTH 136 (401)
Q Consensus 108 Gg~ia~~~A~~--~P~~V~~lvli~~~~~~~ 136 (401)
|+.=.+.|..+ .|..|.+.|+.+|..+.+
T Consensus 117 GcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 117 GCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred cchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 99988888733 467788999998876544
No 142
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.39 E-value=5.4e-06 Score=70.08 Aligned_cols=164 Identities=17% Similarity=0.175 Sum_probs=109.8
Q ss_pred CcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCC---------------------------CChHHHHHHHHHHHH
Q 015755 41 PPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRV---------------------------WNHHEWIQAFEKFLD 93 (401)
Q Consensus 41 p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~---------------------------~s~~~~a~dl~~~l~ 93 (401)
.+||++||.+.+...|.+++..|.-++...|++..|-. -++...++.+..+++
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~ 83 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLID 83 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHH
Confidence 47999999999999998888887767888888876531 022344555666665
Q ss_pred Hh---C--CceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCCCC
Q 015755 94 AI---D--VHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHDGP 168 (401)
Q Consensus 94 ~l---~--~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (401)
.. + ..++++-|.|+||.+++..+..+|..+.+.+-..+........ ...
T Consensus 84 ~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~---------------------~~~----- 137 (206)
T KOG2112|consen 84 NEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIG---------------------LPG----- 137 (206)
T ss_pred HHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhh---------------------ccC-----
Confidence 43 3 3478999999999999999999988888877666543211000 000
Q ss_pred CCCchhhhHHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHc----CCCeEE
Q 015755 169 HEPFIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERY----SGARQA 244 (401)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~----~~~~~~ 244 (401)
+.... -..|.+..||+.| .++|....+...+.+ ...++.
T Consensus 138 ---------------~~~~~---------------------~~~~i~~~Hg~~d-~~vp~~~g~~s~~~l~~~~~~~~f~ 180 (206)
T KOG2112|consen 138 ---------------WLPGV---------------------NYTPILLCHGTAD-PLVPFRFGEKSAQFLKSLGVRVTFK 180 (206)
T ss_pred ---------------Ccccc---------------------CcchhheecccCC-ceeehHHHHHHHHHHHHcCCceeee
Confidence 00000 0346889999999 688887766555544 237888
Q ss_pred EecCCCCCCCcCChHHHHHHHHHHHhh
Q 015755 245 YMKTGGEFPFLSRPDEVNLHLQLHLRR 271 (401)
Q Consensus 245 ~i~~~GH~~~~e~p~~v~~~i~~fl~~ 271 (401)
.+++-+|... |+++. .+..|+..
T Consensus 181 ~y~g~~h~~~---~~e~~-~~~~~~~~ 203 (206)
T KOG2112|consen 181 PYPGLGHSTS---PQELD-DLKSWIKT 203 (206)
T ss_pred ecCCcccccc---HHHHH-HHHHHHHH
Confidence 9999999754 44443 34555543
No 143
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.38 E-value=4.2e-07 Score=84.13 Aligned_cols=94 Identities=26% Similarity=0.356 Sum_probs=55.9
Q ss_pred CCCcEEEeCCCCCChHH--------------H----HHHHHHHhhCCcEEEEecCCCCCC--------------hHHH--
Q 015755 39 VVPPLICLPGTAGTAEV--------------Y----YKQIMALSMKGYRVISVDIPRVWN--------------HHEW-- 84 (401)
Q Consensus 39 ~~p~vvllHG~~~~~~~--------------~----~~~~~~L~~~g~~Vi~~D~pG~~s--------------~~~~-- 84 (401)
.-|.||++||-++..+. + ......|+++||.|+++|.+|+|. .+.+
T Consensus 114 p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~ 193 (390)
T PF12715_consen 114 PFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALAR 193 (390)
T ss_dssp -EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHH
T ss_pred CCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHH
Confidence 34789999998876533 1 123568888999999999999741 1111
Q ss_pred -------------HHHHHHHHHHh------CCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCC
Q 015755 85 -------------IQAFEKFLDAI------DVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFL 133 (401)
Q Consensus 85 -------------a~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~ 133 (401)
+-|....++.+ ..++|.++|+||||+.++.+|+.- ++|++.|.++-.+
T Consensus 194 ~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~l~ 260 (390)
T PF12715_consen 194 NLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGYLC 260 (390)
T ss_dssp HHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-B-
T ss_pred HHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhhhh
Confidence 11222233333 235899999999999999999987 5798888776543
No 144
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.34 E-value=4.4e-06 Score=74.25 Aligned_cols=116 Identities=18% Similarity=0.218 Sum_probs=86.9
Q ss_pred CceEEEeeCCeeEEEEEcCCC----CCCcEEEeCCCCCChHHHHHHH--HHHhh-CCcEEEEecC-CCC-----------
Q 015755 18 VPLHKIPIGTKQWRYYDFGPK----VVPPLICLPGTAGTAEVYYKQI--MALSM-KGYRVISVDI-PRV----------- 78 (401)
Q Consensus 18 ~~~~~~~~~~~~l~y~~~G~~----~~p~vvllHG~~~~~~~~~~~~--~~L~~-~g~~Vi~~D~-pG~----------- 78 (401)
.....+..++.+..|+.+-++ ..|.||++||..++...+.... ..|++ .||-|..+|- +++
T Consensus 35 ~~~~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~ 114 (312)
T COG3509 35 SSVASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFG 114 (312)
T ss_pred CCccccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCC
Confidence 345567777777777666542 3468999999999998766554 55554 4899999963 222
Q ss_pred --------CChHHHHHHHHHHHHHhCCc--eEEEEEEchhHHHHHHHHHhCCcccceEEEecCCC
Q 015755 79 --------WNHHEWIQAFEKFLDAIDVH--HIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFL 133 (401)
Q Consensus 79 --------~s~~~~a~dl~~~l~~l~~~--~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~ 133 (401)
.+...+.+.+..++.+.+++ +|++.|.|-||.++..++..+|+.+.++.+++...
T Consensus 115 p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 115 PADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 12345566667777777877 89999999999999999999999999999888754
No 145
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.33 E-value=4.4e-05 Score=66.25 Aligned_cols=93 Identities=17% Similarity=0.204 Sum_probs=69.8
Q ss_pred cEEEeCCCCCChHHHHHHHHHHhhCC-----cEEEEecCCCC------------------------CChHHHHHHHHHHH
Q 015755 42 PLICLPGTAGTAEVYYKQIMALSMKG-----YRVISVDIPRV------------------------WNHHEWIQAFEKFL 92 (401)
Q Consensus 42 ~vvllHG~~~~~~~~~~~~~~L~~~g-----~~Vi~~D~pG~------------------------~s~~~~a~dl~~~l 92 (401)
|.||+||.+++..+....+..|..++ --++.+|--|- -+..++...+..++
T Consensus 47 PTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~m 126 (288)
T COG4814 47 PTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKAM 126 (288)
T ss_pred ceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHHH
Confidence 78999999999999999999887542 12566666552 13445555555555
Q ss_pred ----HHhCCceEEEEEEchhHHHHHHHHHhCCc-----ccceEEEecCCCC
Q 015755 93 ----DAIDVHHIHLYGTSLGGFLAQLFAQHRPR-----RVRSLVLSNTFLD 134 (401)
Q Consensus 93 ----~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~-----~V~~lvli~~~~~ 134 (401)
++.++.++.+|||||||.-...|+..+.+ .+..+|.++....
T Consensus 127 syL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 127 SYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 45578899999999999999999887643 4889999887544
No 146
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.31 E-value=4.1e-06 Score=74.57 Aligned_cols=38 Identities=21% Similarity=0.381 Sum_probs=35.9
Q ss_pred CcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCC
Q 015755 41 PPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRV 78 (401)
Q Consensus 41 p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~ 78 (401)
|.|||-||++++...|......|+..||-|.+++.|.+
T Consensus 119 PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~ 156 (399)
T KOG3847|consen 119 PVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDR 156 (399)
T ss_pred cEEEEecccccchhhHHHHhhhHhhCceEEEEeecccC
Confidence 78999999999999999999999999999999999874
No 147
>COG3150 Predicted esterase [General function prediction only]
Probab=98.25 E-value=5.4e-05 Score=61.45 Aligned_cols=90 Identities=17% Similarity=0.228 Sum_probs=66.4
Q ss_pred EEEeCCCCCChHHHHHHHH-HHhhCCcEEEEecCCC-CCChHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhCC
Q 015755 43 LICLPGTAGTAEVYYKQIM-ALSMKGYRVISVDIPR-VWNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRP 120 (401)
Q Consensus 43 vvllHG~~~~~~~~~~~~~-~L~~~g~~Vi~~D~pG-~~s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P 120 (401)
||++|||.++..+....+. .+.+...+-+.+--|- .-.+...++.++.++..++.+...|+|.|+||+.|.+++.++.
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~~~i~y~~p~l~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~G 81 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDVRDIEYSTPHLPHDPQQALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLCG 81 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhccccceeeecCCCCCCHHHHHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHhC
Confidence 8999999998887766442 3332334433333332 2467888999999999999888999999999999999999985
Q ss_pred cccceEEEecCCCCC
Q 015755 121 RRVRSLVLSNTFLDT 135 (401)
Q Consensus 121 ~~V~~lvli~~~~~~ 135 (401)
-..|++||...+
T Consensus 82 ---irav~~NPav~P 93 (191)
T COG3150 82 ---IRAVVFNPAVRP 93 (191)
T ss_pred ---ChhhhcCCCcCc
Confidence 245667776554
No 148
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.24 E-value=0.00015 Score=70.62 Aligned_cols=115 Identities=17% Similarity=0.301 Sum_probs=75.7
Q ss_pred EEEeeC---CeeEEEEEcCC----CCCCcEEEeCCCCCChHHHHHHHHH----Hh--------------hCCcEEEEecC
Q 015755 21 HKIPIG---TKQWRYYDFGP----KVVPPLICLPGTAGTAEVYYKQIMA----LS--------------MKGYRVISVDI 75 (401)
Q Consensus 21 ~~~~~~---~~~l~y~~~G~----~~~p~vvllHG~~~~~~~~~~~~~~----L~--------------~~g~~Vi~~D~ 75 (401)
-.++++ +..++|..+.. .+.|.||.+.|.+|++..+-.+.+. +. .+..+++.+|.
T Consensus 14 Gyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~ 93 (415)
T PF00450_consen 14 GYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQ 93 (415)
T ss_dssp EEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--
T ss_pred EEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEee
Confidence 345554 67788876653 4678999999999999887433210 11 03467999997
Q ss_pred C-CCC------------ChHHHHHHHHHHHHHh-------CCceEEEEEEchhHHHHHHHHHh----C------Ccccce
Q 015755 76 P-RVW------------NHHEWIQAFEKFLDAI-------DVHHIHLYGTSLGGFLAQLFAQH----R------PRRVRS 125 (401)
Q Consensus 76 p-G~~------------s~~~~a~dl~~~l~~l-------~~~~v~lvGhS~Gg~ia~~~A~~----~------P~~V~~ 125 (401)
| |.| +.++.++++..+|+.+ .-.+++|.|-|+||..+-.+|.+ . +-.++|
T Consensus 94 PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkG 173 (415)
T PF00450_consen 94 PVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKG 173 (415)
T ss_dssp STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEE
T ss_pred cCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccccc
Confidence 7 432 5677888888877664 44589999999999987666653 3 345889
Q ss_pred EEEecCCCCC
Q 015755 126 LVLSNTFLDT 135 (401)
Q Consensus 126 lvli~~~~~~ 135 (401)
+++.++...+
T Consensus 174 i~IGng~~dp 183 (415)
T PF00450_consen 174 IAIGNGWIDP 183 (415)
T ss_dssp EEEESE-SBH
T ss_pred ceecCccccc
Confidence 9999998764
No 149
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.20 E-value=3.9e-06 Score=78.81 Aligned_cols=95 Identities=18% Similarity=0.299 Sum_probs=78.5
Q ss_pred CCcEEEeCCCCCChHHHHHHHHHHhhCCcE---EEEecCCCC---C----ChHHHHHHHHHHHHHhCCceEEEEEEchhH
Q 015755 40 VPPLICLPGTAGTAEVYYKQIMALSMKGYR---VISVDIPRV---W----NHHEWIQAFEKFLDAIDVHHIHLYGTSLGG 109 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~~~~~~~~L~~~g~~---Vi~~D~pG~---~----s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg 109 (401)
.-++|++||++.+...|..+...+...|+. ++.+++++- + ..+++..-+.+++...+.+++.|+||||||
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS~GG 138 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGDGTYSLAVRGEQLFAYVDEVLAKTGAKKVNLIGHSMGG 138 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccCCCccccccHHHHHHHHHHHHhhcCCCceEEEeecccc
Confidence 349999999988888888887777766777 888888843 2 345666777788888888999999999999
Q ss_pred HHHHHHHHhCC--cccceEEEecCCCC
Q 015755 110 FLAQLFAQHRP--RRVRSLVLSNTFLD 134 (401)
Q Consensus 110 ~ia~~~A~~~P--~~V~~lvli~~~~~ 134 (401)
.++..++..++ .+|+.++.++++-.
T Consensus 139 ~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 139 LDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred hhhHHHHhhcCccceEEEEEEeccCCC
Confidence 99999999888 89999999998644
No 150
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.13 E-value=3.8e-05 Score=71.74 Aligned_cols=97 Identities=23% Similarity=0.266 Sum_probs=67.5
Q ss_pred CCCcEEEeCCCCCChHHHHHHH------HHHhhCCcEEEEecCC-------CCC---ChHHHHHHHHHHHHHhCCceEEE
Q 015755 39 VVPPLICLPGTAGTAEVYYKQI------MALSMKGYRVISVDIP-------RVW---NHHEWIQAFEKFLDAIDVHHIHL 102 (401)
Q Consensus 39 ~~p~vvllHG~~~~~~~~~~~~------~~L~~~g~~Vi~~D~p-------G~~---s~~~~a~dl~~~l~~l~~~~v~l 102 (401)
+.|.||++||.|-.-.....++ ..+. ....++++|+. |+. .+.+.++-...+++..|.++++|
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l-~~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~L 199 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLL-PEVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGNKNIIL 199 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHc-CCCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCCCeEEE
Confidence 4689999999986543322222 2222 24688888885 331 34566666777777778899999
Q ss_pred EEEchhHHHHHHHHHhC--C---cccceEEEecCCCCCh
Q 015755 103 YGTSLGGFLAQLFAQHR--P---RRVRSLVLSNTFLDTH 136 (401)
Q Consensus 103 vGhS~Gg~ia~~~A~~~--P---~~V~~lvli~~~~~~~ 136 (401)
+|-|.||.+++.+.+.. + -.-+++|||+|++...
T Consensus 200 mGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 200 MGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 99999999998876631 1 1257999999987654
No 151
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.12 E-value=0.00018 Score=68.86 Aligned_cols=76 Identities=26% Similarity=0.319 Sum_probs=56.2
Q ss_pred HHHHHHhhCCcEEEEecCCCC----CChHHHHHHHHHHHHHh----C-CceEEEEEEchhHHHHHHHHHhCCcccceEEE
Q 015755 58 KQIMALSMKGYRVISVDIPRV----WNHHEWIQAFEKFLDAI----D-VHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVL 128 (401)
Q Consensus 58 ~~~~~L~~~g~~Vi~~D~pG~----~s~~~~a~dl~~~l~~l----~-~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvl 128 (401)
.+-..|. .|+.|+.+.+.-. -++++.......+++.+ . ..+++|||.+.||+.++.+|+.+|+.+.-+|+
T Consensus 92 evG~AL~-~GHPvYFV~F~p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvl 170 (581)
T PF11339_consen 92 EVGVALR-AGHPVYFVGFFPEPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVL 170 (581)
T ss_pred HHHHHHH-cCCCeEEEEecCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceee
Confidence 3445665 5888888776322 36777666666666554 2 23899999999999999999999999999998
Q ss_pred ecCCCC
Q 015755 129 SNTFLD 134 (401)
Q Consensus 129 i~~~~~ 134 (401)
-+++.+
T Consensus 171 aGaPls 176 (581)
T PF11339_consen 171 AGAPLS 176 (581)
T ss_pred cCCCcc
Confidence 877654
No 152
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.10 E-value=7.4e-05 Score=68.75 Aligned_cols=80 Identities=19% Similarity=0.206 Sum_probs=50.5
Q ss_pred HHHHHhhCCcEEEEecCCCCCCh----HHHHH----HHHHHHH---HhCC---ceEEEEEEchhHHHHHHHHHh----CC
Q 015755 59 QIMALSMKGYRVISVDIPRVWNH----HEWIQ----AFEKFLD---AIDV---HHIHLYGTSLGGFLAQLFAQH----RP 120 (401)
Q Consensus 59 ~~~~L~~~g~~Vi~~D~pG~~s~----~~~a~----dl~~~l~---~l~~---~~v~lvGhS~Gg~ia~~~A~~----~P 120 (401)
.+..+.++||.|+++|+.|.++. ...+. .+.+..+ ..++ .++.++|||-||.-++..|.. -|
T Consensus 18 ~l~~~L~~GyaVv~pDY~Glg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~YAp 97 (290)
T PF03583_consen 18 FLAAWLARGYAVVAPDYEGLGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSYAP 97 (290)
T ss_pred HHHHHHHCCCEEEecCCCCCCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHhCc
Confidence 34555568999999999997531 22222 2322222 1232 479999999999988765543 25
Q ss_pred cc---cceEEEecCCCCChhH
Q 015755 121 RR---VRSLVLSNTFLDTHSF 138 (401)
Q Consensus 121 ~~---V~~lvli~~~~~~~~~ 138 (401)
|. +.|.+..+++.+....
T Consensus 98 eL~~~l~Gaa~gg~~~dl~~~ 118 (290)
T PF03583_consen 98 ELNRDLVGAAAGGPPADLAAL 118 (290)
T ss_pred ccccceeEEeccCCccCHHHH
Confidence 53 6777777776655444
No 153
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.10 E-value=0.0013 Score=60.23 Aligned_cols=98 Identities=17% Similarity=0.207 Sum_probs=66.9
Q ss_pred EEeeCCeeEEEEEcCC---CCCCcEEEeCCCCCChHHH------HHHHHHHh-hCCcEEEEecCCCCC------ChHHHH
Q 015755 22 KIPIGTKQWRYYDFGP---KVVPPLICLPGTAGTAEVY------YKQIMALS-MKGYRVISVDIPRVW------NHHEWI 85 (401)
Q Consensus 22 ~~~~~~~~l~y~~~G~---~~~p~vvllHG~~~~~~~~------~~~~~~L~-~~g~~Vi~~D~pG~~------s~~~~a 85 (401)
.+..|+..+-...... ..+..||+.-|.++.-+.. ...+..++ ..+.+|+.+++||.+ +.++++
T Consensus 116 ~Iq~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s~~dLv 195 (365)
T PF05677_consen 116 PIQYDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPPSRKDLV 195 (365)
T ss_pred EEeeCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCCCHHHHH
Confidence 3445666655444332 2455899999998877651 12233333 247899999999985 457777
Q ss_pred HHHHHHHHHh-----C--CceEEEEEEchhHHHHHHHHHhC
Q 015755 86 QAFEKFLDAI-----D--VHHIHLYGTSLGGFLAQLFAQHR 119 (401)
Q Consensus 86 ~dl~~~l~~l-----~--~~~v~lvGhS~Gg~ia~~~A~~~ 119 (401)
.|-.+.++.+ | .+++++.|||+||.++..++.++
T Consensus 196 ~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 196 KDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred HHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 7766666555 2 25899999999999998866654
No 154
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.10 E-value=7e-06 Score=72.27 Aligned_cols=78 Identities=14% Similarity=0.135 Sum_probs=48.3
Q ss_pred CCcEEEeCCCCCChHHHHHHHHHHhh--CCcEEEEecCCC--------CCChHHH----HHHHHHHHHHhCC--ceEEEE
Q 015755 40 VPPLICLPGTAGTAEVYYKQIMALSM--KGYRVISVDIPR--------VWNHHEW----IQAFEKFLDAIDV--HHIHLY 103 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~~~~~~~~L~~--~g~~Vi~~D~pG--------~~s~~~~----a~dl~~~l~~l~~--~~v~lv 103 (401)
...|||+||+.++...|..+...+.. ..+.-..+...+ +.+++.. ++.|.+.++.... .++++|
T Consensus 4 ~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~IsfI 83 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFKTFDGIDVCGERLAEEILEHIKDYESKIRKISFI 83 (217)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccccchhhHHHHHHHHHHHHHhccccccccccceEE
Confidence 34799999999999999777666654 122211111111 1244444 4444444444443 389999
Q ss_pred EEchhHHHHHHHHH
Q 015755 104 GTSLGGFLAQLFAQ 117 (401)
Q Consensus 104 GhS~Gg~ia~~~A~ 117 (401)
||||||.++-.+..
T Consensus 84 gHSLGGli~r~al~ 97 (217)
T PF05057_consen 84 GHSLGGLIARYALG 97 (217)
T ss_pred EecccHHHHHHHHH
Confidence 99999999865444
No 155
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.06 E-value=9.1e-05 Score=71.68 Aligned_cols=155 Identities=18% Similarity=0.131 Sum_probs=99.9
Q ss_pred CCcEEEeCCCCC--ChHHHH-HHHHHHhh--CCcEEEEecCCCC---CChHHHHHHHHHHHH--------HhCCceEEEE
Q 015755 40 VPPLICLPGTAG--TAEVYY-KQIMALSM--KGYRVISVDIPRV---WNHHEWIQAFEKFLD--------AIDVHHIHLY 103 (401)
Q Consensus 40 ~p~vvllHG~~~--~~~~~~-~~~~~L~~--~g~~Vi~~D~pG~---~s~~~~a~dl~~~l~--------~l~~~~v~lv 103 (401)
.|.++++||.+. ...+|. .+...|.. +-..|-+||++.- -++...++.+..+.. ++...+++|+
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~nI~h~ae~~vSf~r~kvlei~gefpha~IiLv 255 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGANIKHAAEYSVSFDRYKVLEITGEFPHAPIILV 255 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCCcchHHHHHHHHHHhhhhhhhhhccCCCCceEEE
Confidence 578899999981 112222 22222222 3456778888742 245555555555444 2345689999
Q ss_pred EEchhHHHHHHHHHhCC-cccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCCCCCCCchhhhHHHHHH
Q 015755 104 GTSLGGFLAQLFAQHRP-RRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHDGPHEPFIADSVDFVVC 182 (401)
Q Consensus 104 GhS~Gg~ia~~~A~~~P-~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (401)
|.|||+.++...+.-+- ..|+++|.++-.........
T Consensus 256 GrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgpr------------------------------------------ 293 (784)
T KOG3253|consen 256 GRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPR------------------------------------------ 293 (784)
T ss_pred ecccCceeeEEeccccCCceEEEEEEecccccCCCccc------------------------------------------
Confidence 99999998888776643 35888888875432211000
Q ss_pred hhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcC-CCeEEEecCCCCCCCc
Q 015755 183 QVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYS-GARQAYMKTGGEFPFL 255 (401)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~GH~~~~ 255 (401)
....+.+ ..++.|+|+|.|.+| ..+++...+.+++++. ..+++++.+++|.+-.
T Consensus 294 ---girDE~L---------------ldmk~PVLFV~Gsnd-~mcspn~ME~vreKMqA~~elhVI~~adhsmai 348 (784)
T KOG3253|consen 294 ---GIRDEAL---------------LDMKQPVLFVIGSND-HMCSPNSMEEVREKMQAEVELHVIGGADHSMAI 348 (784)
T ss_pred ---CCcchhh---------------HhcCCceEEEecCCc-ccCCHHHHHHHHHHhhccceEEEecCCCccccC
Confidence 0001111 125679999999999 6899999999988874 5789999999997654
No 156
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.04 E-value=0.0006 Score=61.08 Aligned_cols=209 Identities=15% Similarity=0.112 Sum_probs=111.3
Q ss_pred cEEEeCCCCCChH-HHHHHHHHHhhCCcEEEEecCCCC------CChHHHHHHHHHHHHHhCCc---eEEEEEEchhHHH
Q 015755 42 PLICLPGTAGTAE-VYYKQIMALSMKGYRVISVDIPRV------WNHHEWIQAFEKFLDAIDVH---HIHLYGTSLGGFL 111 (401)
Q Consensus 42 ~vvllHG~~~~~~-~~~~~~~~L~~~g~~Vi~~D~pG~------~s~~~~a~dl~~~l~~l~~~---~v~lvGhS~Gg~i 111 (401)
|+|++=||.+... ...+......+.|++++.+-.+-. ..+...++.+.+.+...... ++++-.+|.||..
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSnGG~~ 80 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPSKRLAPAADKLLELLSDSQSASPPPILFHSFSNGGSF 80 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeeccchHHHHHHHHHHhhhhccCCCCCEEEEEEECchHH
Confidence 4566667766554 444445545558999999887642 23455555555555544333 7889999998877
Q ss_pred HHHHHHh---------CC-cccceEEEecCCCCChh------HhhcCCcccccccchhhHHHHHHhhccCCCCCCCchhh
Q 015755 112 AQLFAQH---------RP-RRVRSLVLSNTFLDTHS------FAAAMPWAPIVSWTPSFLLKRYVLTGIHDGPHEPFIAD 175 (401)
Q Consensus 112 a~~~A~~---------~P-~~V~~lvli~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (401)
.+..... .+ .+++|+|+-+++..... +....+......+........... ..
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~ 148 (240)
T PF05705_consen 81 LYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFLL------------RL 148 (240)
T ss_pred HHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHHH------------HH
Confidence 6654331 11 23888888776533221 011111000000000000000000 00
Q ss_pred hHHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcC----CCeEEEecCCCC
Q 015755 176 SVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYS----GARQAYMKTGGE 251 (401)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~GH 251 (401)
....................+ .........+|.+++++..| .+++.+..++..+... .++...+.++.|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~p~lylYS~~D-~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~H 221 (240)
T PF05705_consen 149 SIISYFIFGYPDVQEYYRRAL------NDFANSPSRCPRLYLYSKAD-PLIPWRDVEEHAEEARRKGWDVRAEKFEDSPH 221 (240)
T ss_pred HHHHHHHhcCCcHHHHHHHHH------hhhhcCCCCCCeEEecCCCC-cCcCHHHHHHHHHHHHHcCCeEEEecCCCCch
Confidence 000000000000011111111 11222345689999999999 6888887777765542 267778899999
Q ss_pred CCCc-CChHHHHHHHHHHH
Q 015755 252 FPFL-SRPDEVNLHLQLHL 269 (401)
Q Consensus 252 ~~~~-e~p~~v~~~i~~fl 269 (401)
..++ .+|++..+++.+|+
T Consensus 222 V~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 222 VAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred hhhcccCHHHHHHHHHhhC
Confidence 8877 58999999999885
No 157
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.87 E-value=0.00036 Score=60.97 Aligned_cols=204 Identities=15% Similarity=0.194 Sum_probs=106.4
Q ss_pred HHHhhCCcEEEEecCCCCCC---hHH------HHHH--------HHHHHHH------hCCceEEEEEEchhHHHHHHHHH
Q 015755 61 MALSMKGYRVISVDIPRVWN---HHE------WIQA--------FEKFLDA------IDVHHIHLYGTSLGGFLAQLFAQ 117 (401)
Q Consensus 61 ~~L~~~g~~Vi~~D~pG~~s---~~~------~a~d--------l~~~l~~------l~~~~v~lvGhS~Gg~ia~~~A~ 117 (401)
..+..++...+.++-|-||. .++ .+.| |.++.+. .|..+..++|.||||.+|.....
T Consensus 135 ~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS 214 (371)
T KOG1551|consen 135 KPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGS 214 (371)
T ss_pred CchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcccccccCcccceeeeeecccHHHHhhcc
Confidence 44555677778888776652 111 1112 2222222 35668999999999999999999
Q ss_pred hCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCCCCCCCch-hhhHHHHHHhhhhcCHHHHHHHh
Q 015755 118 HRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHDGPHEPFI-ADSVDFVVCQVETLSREDLASRL 196 (401)
Q Consensus 118 ~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 196 (401)
.++.-|.-+-+.++......+.... .... ...+.++.............. +.+......+.++. +.......
T Consensus 215 ~~q~Pva~~p~l~~~~asvs~teg~-----l~~~-~s~~~~~~~~t~~~~~~~r~p~Q~~~~~~~~~srn~-~~E~~~~M 287 (371)
T KOG1551|consen 215 LHQKPVATAPCLNSSKASVSATEGL-----LLQD-TSKMKRFNQTTNKSGYTSRNPAQSYHLLSKEQSRNS-RKESLIFM 287 (371)
T ss_pred cCCCCccccccccccccchhhhhhh-----hhhh-hHHHHhhccCcchhhhhhhCchhhHHHHHHHhhhcc-hHHHHHHH
Confidence 8877666665555532222211110 0000 000111100000000000000 11111111111111 11111111
Q ss_pred hhhc-ccccccccccC---CcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEEEecCCCCC-CCcCChHHHHHHHHHHHhh
Q 015755 197 TLTA-DAASVGNLLLS---DSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEF-PFLSRPDEVNLHLQLHLRR 271 (401)
Q Consensus 197 ~~~~-~~~~~~~~~i~---~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~-~~~e~p~~v~~~i~~fl~~ 271 (401)
..-. +...+....++ .-++++.+++| ..+|......+.+..|++++..+. +||. .++-+-+.+..+|.+-|++
T Consensus 288 r~vmd~~T~v~~fp~Pvdpsl~ivv~A~~D-~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 288 RGVMDECTHVANFPVPVDPSLIIVVQAKED-AYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDR 365 (371)
T ss_pred HHHHHhhchhhcCCCCCCCCeEEEEEecCC-ccccccCcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHHHHHHh
Confidence 1111 11222222222 12556677777 789999999999999999999998 8895 4567789999999999887
Q ss_pred cc
Q 015755 272 VG 273 (401)
Q Consensus 272 ~~ 273 (401)
..
T Consensus 366 ~~ 367 (371)
T KOG1551|consen 366 LD 367 (371)
T ss_pred hh
Confidence 64
No 158
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.83 E-value=0.00018 Score=66.04 Aligned_cols=99 Identities=15% Similarity=0.185 Sum_probs=65.2
Q ss_pred CCCcEEEeCCCCCChHH-HHHHHHHHhh--CCcEEEEecCCCCC--------------ChHHHHHHHHHHHHHhCCceEE
Q 015755 39 VVPPLICLPGTAGTAEV-YYKQIMALSM--KGYRVISVDIPRVW--------------NHHEWIQAFEKFLDAIDVHHIH 101 (401)
Q Consensus 39 ~~p~vvllHG~~~~~~~-~~~~~~~L~~--~g~~Vi~~D~pG~~--------------s~~~~a~dl~~~l~~l~~~~v~ 101 (401)
.+..+||+||+..+-+. -+..++-..+ .....+.+-||--+ +-+++...|..+.+....++|+
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ 194 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIY 194 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEE
Confidence 45689999999987652 2333333332 34678899998542 2233444444444445677999
Q ss_pred EEEEchhHHHHHHHHHh--------CCcccceEEEecCCCCChh
Q 015755 102 LYGTSLGGFLAQLFAQH--------RPRRVRSLVLSNTFLDTHS 137 (401)
Q Consensus 102 lvGhS~Gg~ia~~~A~~--------~P~~V~~lvli~~~~~~~~ 137 (401)
|++||||.+++++...+ -+..++-+||-+|..+..-
T Consensus 195 ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DV 238 (377)
T COG4782 195 LLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDV 238 (377)
T ss_pred EEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhh
Confidence 99999999999887664 2335777888887665543
No 159
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.83 E-value=7.8e-05 Score=64.40 Aligned_cols=79 Identities=18% Similarity=0.157 Sum_probs=53.9
Q ss_pred CCcEEEeCCCCCChHHHHHHHHHHhhCCcE-EEEecCCCCCChHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHh
Q 015755 40 VPPLICLPGTAGTAEVYYKQIMALSMKGYR-VISVDIPRVWNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQH 118 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~~~~~~~~L~~~g~~-Vi~~D~pG~~s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~ 118 (401)
...|||+.|+|.+...+..+. +. .++. ++++|++..- ++. | --+.+.+.|||+|||-.+|..+...
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~--~~-~~~D~l~~yDYr~l~-~d~---~------~~~y~~i~lvAWSmGVw~A~~~l~~ 77 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLI--LP-ENYDVLICYDYRDLD-FDF---D------LSGYREIYLVAWSMGVWAANRVLQG 77 (213)
T ss_pred CeEEEEEecCCCChHHhhhcc--CC-CCccEEEEecCcccc-ccc---c------cccCceEEEEEEeHHHHHHHHHhcc
Confidence 458999999999998876543 12 3455 4667887432 110 1 1245789999999999999887655
Q ss_pred CCcccceEEEecCCC
Q 015755 119 RPRRVRSLVLSNTFL 133 (401)
Q Consensus 119 ~P~~V~~lvli~~~~ 133 (401)
.| +...|.|++.+
T Consensus 78 ~~--~~~aiAINGT~ 90 (213)
T PF04301_consen 78 IP--FKRAIAINGTP 90 (213)
T ss_pred CC--cceeEEEECCC
Confidence 43 66777777654
No 160
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.81 E-value=0.0011 Score=65.54 Aligned_cols=107 Identities=18% Similarity=0.207 Sum_probs=76.0
Q ss_pred eEEEEEc--CCCCCCcEEEeCCCCCChH--HHHHHHHHHhhCCcEEEEecCCCCC-----------------ChHHHHHH
Q 015755 29 QWRYYDF--GPKVVPPLICLPGTAGTAE--VYYKQIMALSMKGYRVISVDIPRVW-----------------NHHEWIQA 87 (401)
Q Consensus 29 ~l~y~~~--G~~~~p~vvllHG~~~~~~--~~~~~~~~L~~~g~~Vi~~D~pG~~-----------------s~~~~a~d 87 (401)
.|.|+.. -+++.|.+|..-|.-+... .|....-.|.++||---....||-+ ++.++++.
T Consensus 435 SLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~ 514 (682)
T COG1770 435 SLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAA 514 (682)
T ss_pred EEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHH
Confidence 3455532 2345677777777666543 3444444677788776666677742 56777777
Q ss_pred HHHHHHHh--CCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCC
Q 015755 88 FEKFLDAI--DVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDT 135 (401)
Q Consensus 88 l~~~l~~l--~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~ 135 (401)
...+++.= ..+.++++|-|.||++.-..+...|+.+.++|+-.|+.+.
T Consensus 515 a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDv 564 (682)
T COG1770 515 ARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDV 564 (682)
T ss_pred HHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccch
Confidence 77777542 2247999999999999999999999999999999887664
No 161
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.81 E-value=0.00019 Score=71.63 Aligned_cols=105 Identities=16% Similarity=0.202 Sum_probs=64.5
Q ss_pred CCeeEEEEEcCC---------CCCCcEEEeCCCCCChHHHHHHHHHHhh----------------CCcEEEEecCCCC--
Q 015755 26 GTKQWRYYDFGP---------KVVPPLICLPGTAGTAEVYYKQIMALSM----------------KGYRVISVDIPRV-- 78 (401)
Q Consensus 26 ~~~~l~y~~~G~---------~~~p~vvllHG~~~~~~~~~~~~~~L~~----------------~g~~Vi~~D~pG~-- 78 (401)
+...++.+..|. .+|-||+|++|..|+.++.+.++..... ..|+..++|+=+-
T Consensus 66 ~kY~LYLY~Egs~~~e~~~lelsGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~t 145 (973)
T KOG3724|consen 66 DKYSLYLYREGSRWWERSTLELSGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFT 145 (973)
T ss_pred CceEEEEecccccccccccccCCCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhh
Confidence 344555555543 1456999999999999988777654431 2456677776542
Q ss_pred ---C-ChHHHHHHHHHHHHH----hC---------CceEEEEEEchhHHHHHHHHHhCC----cccceEEEecC
Q 015755 79 ---W-NHHEWIQAFEKFLDA----ID---------VHHIHLYGTSLGGFLAQLFAQHRP----RRVRSLVLSNT 131 (401)
Q Consensus 79 ---~-s~~~~a~dl~~~l~~----l~---------~~~v~lvGhS~Gg~ia~~~A~~~P----~~V~~lvli~~ 131 (401)
| .+.+.++-+.+.|+. .. .+.|+||||||||.+|...+. +| +.|.-++-.++
T Consensus 146 Am~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~t-lkn~~~~sVntIITlss 218 (973)
T KOG3724|consen 146 AMHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLT-LKNEVQGSVNTIITLSS 218 (973)
T ss_pred hhccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHh-hhhhccchhhhhhhhcC
Confidence 2 345555544444332 22 235999999999999976554 34 44555555544
No 162
>COG4099 Predicted peptidase [General function prediction only]
Probab=97.80 E-value=0.0002 Score=63.64 Aligned_cols=106 Identities=19% Similarity=0.198 Sum_probs=66.7
Q ss_pred CeeEEEEEcCCC------CC-CcEEEeCCCCCChHHHHHHHH----HH----hhCCcEEEEecCCCC-CCh--------H
Q 015755 27 TKQWRYYDFGPK------VV-PPLICLPGTAGTAEVYYKQIM----AL----SMKGYRVISVDIPRV-WNH--------H 82 (401)
Q Consensus 27 ~~~l~y~~~G~~------~~-p~vvllHG~~~~~~~~~~~~~----~L----~~~g~~Vi~~D~pG~-~s~--------~ 82 (401)
+..+.|+.+-++ +- |.|||+||.+..+..-+.... .+ -+.+|-|+++.+--. -+. .
T Consensus 171 gneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t~~~l~ 250 (387)
T COG4099 171 GNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKTLLYLI 250 (387)
T ss_pred CceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccccccccccccchhHH
Confidence 556777766542 12 789999999998765333221 11 111233444442111 111 1
Q ss_pred HHHHHHH-HHHHHhCCc--eEEEEEEchhHHHHHHHHHhCCcccceEEEecCC
Q 015755 83 EWIQAFE-KFLDAIDVH--HIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTF 132 (401)
Q Consensus 83 ~~a~dl~-~~l~~l~~~--~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~ 132 (401)
...+.+. .+.++.+++ +++++|.|+||+-++.++.++|+.+.+.++|++.
T Consensus 251 ~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 251 EKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred HHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 2233333 233455554 8999999999999999999999999999999984
No 163
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.78 E-value=0.00013 Score=65.76 Aligned_cols=51 Identities=20% Similarity=0.341 Sum_probs=40.4
Q ss_pred HHHHHHHHHHH-hCCc--eEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCC
Q 015755 84 WIQAFEKFLDA-IDVH--HIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLD 134 (401)
Q Consensus 84 ~a~dl~~~l~~-l~~~--~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~ 134 (401)
+.++|..+|+. ++.. +..|+|+||||+.|+.++.+||+.+.+++.+++...
T Consensus 98 l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALD 151 (251)
T ss_dssp HHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESE
T ss_pred hhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccc
Confidence 44566666644 4433 268999999999999999999999999999998544
No 164
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.78 E-value=0.00073 Score=62.71 Aligned_cols=115 Identities=17% Similarity=0.253 Sum_probs=76.8
Q ss_pred eEEEeeCCeeEE--EEEcCC-CCCCcEEEeCCCCCChH---HHHHHHHHHhhCCcEEEEecCCCCC--------------
Q 015755 20 LHKIPIGTKQWR--YYDFGP-KVVPPLICLPGTAGTAE---VYYKQIMALSMKGYRVISVDIPRVW-------------- 79 (401)
Q Consensus 20 ~~~~~~~~~~l~--y~~~G~-~~~p~vvllHG~~~~~~---~~~~~~~~L~~~g~~Vi~~D~pG~~-------------- 79 (401)
.+.++.++.++- |+.+.. ...-.||+|||.+.+.+ .-..+-..|.+.|+..+++.+|.-.
T Consensus 64 ~~~L~~~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~ 143 (310)
T PF12048_consen 64 VQWLQAGEERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEV 143 (310)
T ss_pred cEEeecCCEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCC
Confidence 445555555432 222222 22348999999998874 3345556788789999999988710
Q ss_pred --------C----------------h----HHHHHHH---HHHHHHhCCceEEEEEEchhHHHHHHHHHhCCc-ccceEE
Q 015755 80 --------N----------------H----HEWIQAF---EKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPR-RVRSLV 127 (401)
Q Consensus 80 --------s----------------~----~~~a~dl---~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~-~V~~lv 127 (401)
+ . +.+.+-+ ..+++..+.++++||||+.|+..++.+....+. .+.+||
T Consensus 144 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV 223 (310)
T PF12048_consen 144 PSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALV 223 (310)
T ss_pred CCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEE
Confidence 0 0 1222222 333444566679999999999999999998764 589999
Q ss_pred EecCCCC
Q 015755 128 LSNTFLD 134 (401)
Q Consensus 128 li~~~~~ 134 (401)
+|++...
T Consensus 224 ~I~a~~p 230 (310)
T PF12048_consen 224 LINAYWP 230 (310)
T ss_pred EEeCCCC
Confidence 9998543
No 165
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.74 E-value=8.3e-05 Score=67.24 Aligned_cols=91 Identities=31% Similarity=0.431 Sum_probs=64.2
Q ss_pred CcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCCCh---------HHHHHHH-HHHHHHhCC--ceEEEEEEchh
Q 015755 41 PPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWNH---------HEWIQAF-EKFLDAIDV--HHIHLYGTSLG 108 (401)
Q Consensus 41 p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~s~---------~~~a~dl-~~~l~~l~~--~~v~lvGhS~G 108 (401)
..|+|+-|..+--+.= -....++ .||.|+.++.||+..+ ...++.+ .-.|+.++. +.++|+|+|.|
T Consensus 244 ~LvIC~EGNAGFYEvG-~m~tP~~-lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIG 321 (517)
T KOG1553|consen 244 DLVICFEGNAGFYEVG-VMNTPAQ-LGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIG 321 (517)
T ss_pred eEEEEecCCccceEee-eecChHH-hCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCCccceEEEEeecC
Confidence 3678888877654421 1112233 5899999999998422 1223333 334566766 47999999999
Q ss_pred HHHHHHHHHhCCcccceEEEecCCCC
Q 015755 109 GFLAQLFAQHRPRRVRSLVLSNTFLD 134 (401)
Q Consensus 109 g~ia~~~A~~~P~~V~~lvli~~~~~ 134 (401)
|+-++.+|..||+ |+++||-+++-+
T Consensus 322 GF~~~waAs~YPd-VkavvLDAtFDD 346 (517)
T KOG1553|consen 322 GFPVAWAASNYPD-VKAVVLDATFDD 346 (517)
T ss_pred CchHHHHhhcCCC-ceEEEeecchhh
Confidence 9999999999997 999999888643
No 166
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.72 E-value=0.00024 Score=68.26 Aligned_cols=80 Identities=20% Similarity=0.354 Sum_probs=60.2
Q ss_pred HHHHHHHHHhhCCcE------EEEecCCCCCC-hHHHHHHHHHHHHHh---CCceEEEEEEchhHHHHHHHHHhCCc---
Q 015755 55 VYYKQIMALSMKGYR------VISVDIPRVWN-HHEWIQAFEKFLDAI---DVHHIHLYGTSLGGFLAQLFAQHRPR--- 121 (401)
Q Consensus 55 ~~~~~~~~L~~~g~~------Vi~~D~pG~~s-~~~~a~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~A~~~P~--- 121 (401)
.|..+++.|.+.||. ..-+|+|=-.. .+++...|...++.. ..++|+||||||||.++..+....+.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W 145 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPAERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEW 145 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchhhHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhh
Confidence 799999999876765 22378875433 456666666666543 35699999999999999999888753
Q ss_pred ---ccceEEEecCCCC
Q 015755 122 ---RVRSLVLSNTFLD 134 (401)
Q Consensus 122 ---~V~~lvli~~~~~ 134 (401)
.|+++|.++++..
T Consensus 146 ~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 146 KDKYIKRFISIGTPFG 161 (389)
T ss_pred HHhhhhEEEEeCCCCC
Confidence 5999999998654
No 167
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.65 E-value=0.00039 Score=68.09 Aligned_cols=94 Identities=18% Similarity=0.269 Sum_probs=62.9
Q ss_pred CCcEEEeCCCCCChHHH---HHHHHHHhhC-CcEEEEecCCCCC----------------ChHHHHHHHHHHHHHhC---
Q 015755 40 VPPLICLPGTAGTAEVY---YKQIMALSMK-GYRVISVDIPRVW----------------NHHEWIQAFEKFLDAID--- 96 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~~---~~~~~~L~~~-g~~Vi~~D~pG~~----------------s~~~~a~dl~~~l~~l~--- 96 (401)
+|.+|++ |.-++...+ ..++..|+++ |--+++++.|-|| ++++..+|+..+++++.
T Consensus 29 gpifl~~-ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 29 GPIFLYI-GGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp SEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEE-CCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 5555555 555554432 2244555543 7789999999875 67888999999887753
Q ss_pred ----CceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCC
Q 015755 97 ----VHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLD 134 (401)
Q Consensus 97 ----~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~ 134 (401)
-.|++++|-|+||++|+.+-.+||+.|.|.+..+++..
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 13899999999999999999999999999999887654
No 168
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.59 E-value=0.0009 Score=64.65 Aligned_cols=94 Identities=19% Similarity=0.181 Sum_probs=62.0
Q ss_pred CCCcEEEeCCCCCChH-HHHHHHHHHhhCC----cEEEEecCCCC-------CCh----HHHHHHHHHHHHHh-C----C
Q 015755 39 VVPPLICLPGTAGTAE-VYYKQIMALSMKG----YRVISVDIPRV-------WNH----HEWIQAFEKFLDAI-D----V 97 (401)
Q Consensus 39 ~~p~vvllHG~~~~~~-~~~~~~~~L~~~g----~~Vi~~D~pG~-------~s~----~~~a~dl~~~l~~l-~----~ 97 (401)
..|+|+++||-.-... .....+..|.+.| .-++.+|..+. ... +.++++|.-++++. . .
T Consensus 208 ~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y~~~~d~ 287 (411)
T PRK10439 208 ERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIAPFSDDA 287 (411)
T ss_pred CCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 3578999999542211 1233455555454 33577775321 111 23345565556543 2 2
Q ss_pred ceEEEEEEchhHHHHHHHHHhCCcccceEEEecCC
Q 015755 98 HHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTF 132 (401)
Q Consensus 98 ~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~ 132 (401)
++.+|+|+||||..|+.++.++|+.+.+++.+++.
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 46889999999999999999999999999999984
No 169
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.56 E-value=0.00031 Score=53.80 Aligned_cols=60 Identities=15% Similarity=0.135 Sum_probs=54.1
Q ss_pred CCcEEEEEeCCCCCCCcHHHHHHHHHHcCCCeEEEecCCCCCCCcCChHHHHHHHHHHHhh
Q 015755 211 SDSHITIMDTNDYCATSQQLKDQLSERYSGARQAYMKTGGEFPFLSRPDEVNLHLQLHLRR 271 (401)
Q Consensus 211 ~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~v~~~i~~fl~~ 271 (401)
..|+|+|.++.| ...|.+.++.+++.+++++++.+++.||-.+.....-+.+++.+||..
T Consensus 34 ~~piL~l~~~~D-p~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHD-PVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcC-CCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 368999999999 699999999999999999999999999988876667888999999974
No 170
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.42 E-value=0.0001 Score=62.19 Aligned_cols=96 Identities=21% Similarity=0.368 Sum_probs=67.7
Q ss_pred CCcEEEeCCCCCChHHHHH--HH-HHHhhCCcEEEEecC--CCC-----------------------------CChHH-H
Q 015755 40 VPPLICLPGTAGTAEVYYK--QI-MALSMKGYRVISVDI--PRV-----------------------------WNHHE-W 84 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~~~~--~~-~~L~~~g~~Vi~~D~--pG~-----------------------------~s~~~-~ 84 (401)
-|++.++-|+.++.+.|.. -+ +.-.+.|+.|+++|- ||. |.+-+ .
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv 123 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYV 123 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHH
Confidence 4789999999999887633 12 233345899999995 442 22322 3
Q ss_pred HHHHHHHHHH----hCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCC
Q 015755 85 IQAFEKFLDA----IDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDT 135 (401)
Q Consensus 85 a~dl~~~l~~----l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~ 135 (401)
.+.+.+++.. +...++.|.||||||.=|+..+.++|.+.+++-..+|.+++
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP 178 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNP 178 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCc
Confidence 4556666652 23347889999999999999999999988887777765544
No 171
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.40 E-value=0.0018 Score=59.40 Aligned_cols=60 Identities=15% Similarity=0.204 Sum_probs=47.1
Q ss_pred CcEEEEEeCCCCCCCcHHHHHHHHHHcCC--CeEEEecCCCCCCCcCChH---HHHHHHHHHHhhc
Q 015755 212 DSHITIMDTNDYCATSQQLKDQLSERYSG--ARQAYMKTGGEFPFLSRPD---EVNLHLQLHLRRV 272 (401)
Q Consensus 212 ~Pvlli~G~~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~GH~~~~e~p~---~v~~~i~~fl~~~ 272 (401)
+|+++++|.+| ..+|....+.+.+..+. .+...+++++|......+. +..+.+.+|+.+.
T Consensus 233 ~P~l~~~G~~D-~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 233 RPVLLVHGERD-EVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred cceEEEecCCC-cccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 79999999999 68898888888777655 5778889999988764443 6777788888753
No 172
>PLN02606 palmitoyl-protein thioesterase
Probab=97.39 E-value=0.0016 Score=59.05 Aligned_cols=92 Identities=13% Similarity=0.096 Sum_probs=62.0
Q ss_pred CCcEEEeCCCC--CChHHHHHHHHHHhh-CCcEEEEecC-----CCC-CChHHHHHHHHHHHHH---hCCceEEEEEEch
Q 015755 40 VPPLICLPGTA--GTAEVYYKQIMALSM-KGYRVISVDI-----PRV-WNHHEWIQAFEKFLDA---IDVHHIHLYGTSL 107 (401)
Q Consensus 40 ~p~vvllHG~~--~~~~~~~~~~~~L~~-~g~~Vi~~D~-----pG~-~s~~~~a~dl~~~l~~---l~~~~v~lvGhS~ 107 (401)
..|||+.||+| ++...+..+.+.+.+ .+..+..+.. -++ +.+.+.++.+-+-+.. +. .-+++||+|-
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~ig~~~~~s~~~~~~~Qv~~vce~l~~~~~L~-~G~naIGfSQ 104 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVEIGNGVQDSLFMPLRQQASIACEKIKQMKELS-EGYNIVAESQ 104 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEEECCCcccccccCHHHHHHHHHHHHhcchhhc-CceEEEEEcc
Confidence 45899999999 555566666666642 2544443332 122 3444555444443332 22 3599999999
Q ss_pred hHHHHHHHHHhCCc--ccceEEEecCC
Q 015755 108 GGFLAQLFAQHRPR--RVRSLVLSNTF 132 (401)
Q Consensus 108 Gg~ia~~~A~~~P~--~V~~lvli~~~ 132 (401)
||.++-.++.+.|+ .|+.+|-+++.
T Consensus 105 GglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 105 GNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred hhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 99999999999987 49999998874
No 173
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.35 E-value=0.00023 Score=70.99 Aligned_cols=94 Identities=14% Similarity=0.177 Sum_probs=59.8
Q ss_pred CCCcEEEeCCCCC---ChHHHHHHHHHHhhC--CcEEEEecCC-CC---C-----------ChHHHH---HHHHHHHHHh
Q 015755 39 VVPPLICLPGTAG---TAEVYYKQIMALSMK--GYRVISVDIP-RV---W-----------NHHEWI---QAFEKFLDAI 95 (401)
Q Consensus 39 ~~p~vvllHG~~~---~~~~~~~~~~~L~~~--g~~Vi~~D~p-G~---~-----------s~~~~a---~dl~~~l~~l 95 (401)
..|+||++||.+- +...+ ....|... ++.|+.+++| |. . .+.+.. +.+.+-++.+
T Consensus 94 ~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~f 171 (493)
T cd00312 94 SLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAF 171 (493)
T ss_pred CCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 4689999999643 22221 12333333 3899999998 32 1 122322 2334444555
Q ss_pred CC--ceEEEEEEchhHHHHHHHHHh--CCcccceEEEecCCCC
Q 015755 96 DV--HHIHLYGTSLGGFLAQLFAQH--RPRRVRSLVLSNTFLD 134 (401)
Q Consensus 96 ~~--~~v~lvGhS~Gg~ia~~~A~~--~P~~V~~lvli~~~~~ 134 (401)
|. ++|.|+|+|.||..+..++.. .+..+.++|++++...
T Consensus 172 ggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 172 GGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred CCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 54 489999999999999887765 3456888898887543
No 174
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.31 E-value=0.036 Score=48.84 Aligned_cols=91 Identities=20% Similarity=0.170 Sum_probs=61.2
Q ss_pred cEEEeCCCCCCh---HHHHHHHHHHhhCCcEEEEecCCCCCChHHHHHHHH----HHHHHh----CC----ceEEEEEEc
Q 015755 42 PLICLPGTAGTA---EVYYKQIMALSMKGYRVISVDIPRVWNHHEWIQAFE----KFLDAI----DV----HHIHLYGTS 106 (401)
Q Consensus 42 ~vvllHG~~~~~---~~~~~~~~~L~~~g~~Vi~~D~pG~~s~~~~a~dl~----~~l~~l----~~----~~v~lvGhS 106 (401)
.|=|+-|..-.. -.|+.+++.|.++||.|++.-+.--.+....|..+. ..++.+ +. -+++-+|||
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHS 98 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVTFDHQAIAREVWERFERCLRALQKRGGLDPAYLPVYGVGHS 98 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeeecc
Confidence 455666654332 368889999999999999988864444444333332 222222 22 267889999
Q ss_pred hhHHHHHHHHHhCCcccceEEEecCC
Q 015755 107 LGGFLAQLFAQHRPRRVRSLVLSNTF 132 (401)
Q Consensus 107 ~Gg~ia~~~A~~~P~~V~~lvli~~~ 132 (401)
+|+-+-+.+...++..-++.|+++-.
T Consensus 99 lGcklhlLi~s~~~~~r~gniliSFN 124 (250)
T PF07082_consen 99 LGCKLHLLIGSLFDVERAGNILISFN 124 (250)
T ss_pred cchHHHHHHhhhccCcccceEEEecC
Confidence 99999998888876656788888753
No 175
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=97.25 E-value=0.0062 Score=60.00 Aligned_cols=112 Identities=14% Similarity=0.217 Sum_probs=76.5
Q ss_pred Eee-CCeeEEEEEcCC---CCCCcEEEeCCCCCChH--HH---HHHHH---HHhhCCcEEEEecCCCCCChH--------
Q 015755 23 IPI-GTKQWRYYDFGP---KVVPPLICLPGTAGTAE--VY---YKQIM---ALSMKGYRVISVDIPRVWNHH-------- 82 (401)
Q Consensus 23 ~~~-~~~~l~y~~~G~---~~~p~vvllHG~~~~~~--~~---~~~~~---~L~~~g~~Vi~~D~pG~~s~~-------- 82 (401)
|+. ||++|+-..+-+ +..|+++..+-++-... .+ ....+ .++.+||.||..|.||.|.++
T Consensus 24 V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~~~ 103 (563)
T COG2936 24 VPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPESS 103 (563)
T ss_pred EEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccceecc
Confidence 344 888988766644 45678888882222222 11 12223 466789999999999986432
Q ss_pred HHH---HHHHHHHHHhCC--ceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCC
Q 015755 83 EWI---QAFEKFLDAIDV--HHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLD 134 (401)
Q Consensus 83 ~~a---~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~ 134 (401)
+-+ .|+.+++..... .+|..+|.|++|+..+.+|+..|-.+++++...+..+
T Consensus 104 ~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 104 REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 122 345555554433 4899999999999999999999888899888877654
No 176
>PLN02209 serine carboxypeptidase
Probab=97.24 E-value=0.12 Score=50.34 Aligned_cols=115 Identities=22% Similarity=0.287 Sum_probs=72.0
Q ss_pred EEEeeC---CeeEEEEEcCC----CCCCcEEEeCCCCCChHHHHHHHH----------------HHhh------CCcEEE
Q 015755 21 HKIPIG---TKQWRYYDFGP----KVVPPLICLPGTAGTAEVYYKQIM----------------ALSM------KGYRVI 71 (401)
Q Consensus 21 ~~~~~~---~~~l~y~~~G~----~~~p~vvllHG~~~~~~~~~~~~~----------------~L~~------~g~~Vi 71 (401)
-+++++ +..++|..... .+.|.|+.+-|.+|++..+-.+.+ .|.. +..+++
T Consensus 42 Gy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anll 121 (437)
T PLN02209 42 GYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANII 121 (437)
T ss_pred EEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEE
Confidence 345553 45666665443 356899999999998876533221 1100 235788
Q ss_pred EecCC-CCC-----------ChHHHHHHHHHHHHHh-------CCceEEEEEEchhHHHHHHHHHh----C------Ccc
Q 015755 72 SVDIP-RVW-----------NHHEWIQAFEKFLDAI-------DVHHIHLYGTSLGGFLAQLFAQH----R------PRR 122 (401)
Q Consensus 72 ~~D~p-G~~-----------s~~~~a~dl~~~l~~l-------~~~~v~lvGhS~Gg~ia~~~A~~----~------P~~ 122 (401)
.+|.| |.| +-++.++++..+++.+ ...+++|.|.|+||..+-.+|.. + +-.
T Consensus 122 fiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~in 201 (437)
T PLN02209 122 FLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPIN 201 (437)
T ss_pred EecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCcee
Confidence 89977 321 1234556666666553 23489999999999876666543 2 125
Q ss_pred cceEEEecCCCCC
Q 015755 123 VRSLVLSNTFLDT 135 (401)
Q Consensus 123 V~~lvli~~~~~~ 135 (401)
++|+++.++...+
T Consensus 202 l~Gi~igng~td~ 214 (437)
T PLN02209 202 LQGYVLGNPITHI 214 (437)
T ss_pred eeeEEecCcccCh
Confidence 7899999987653
No 177
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.21 E-value=0.0053 Score=57.80 Aligned_cols=159 Identities=16% Similarity=0.158 Sum_probs=90.6
Q ss_pred HHHHHHHHh---CCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCC-CChhHhhcCCcccccccchhhHHHHHHhh
Q 015755 87 AFEKFLDAI---DVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFL-DTHSFAAAMPWAPIVSWTPSFLLKRYVLT 162 (401)
Q Consensus 87 dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (401)
.+.++++.. .++++++.|.|-=|..+...|+ ...||.+++-+.... +... .+...+...
T Consensus 158 ~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~LN~~~----------------~l~h~y~~y 220 (367)
T PF10142_consen 158 AVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVLNMKA----------------NLEHQYRSY 220 (367)
T ss_pred HHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccCCcHH----------------HHHHHHHHh
Confidence 344555544 6789999999999999998888 557899998766432 1111 011111110
Q ss_pred ccCCCCCCCchhhhHHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCC-C
Q 015755 163 GIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSG-A 241 (401)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~-~ 241 (401)
+ +.....+..-..+.+. ..+....+........+.... ..+..|.++|.|..|+ +..++....+-..+|+ .
T Consensus 221 G--~~ws~a~~dY~~~gi~---~~l~tp~f~~L~~ivDP~~Y~--~rL~~PK~ii~atgDe-Ff~pD~~~~y~d~L~G~K 292 (367)
T PF10142_consen 221 G--GNWSFAFQDYYNEGIT---QQLDTPEFDKLMQIVDPYSYR--DRLTMPKYIINATGDE-FFVPDSSNFYYDKLPGEK 292 (367)
T ss_pred C--CCCccchhhhhHhCch---hhcCCHHHHHHHHhcCHHHHH--HhcCccEEEEecCCCc-eeccCchHHHHhhCCCCe
Confidence 0 0111111111111111 111222222222211111111 1246789999999995 6666777777778875 5
Q ss_pred eEEEecCCCCCCCcCChHHHHHHHHHHHhhcc
Q 015755 242 RQAYMKTGGEFPFLSRPDEVNLHLQLHLRRVG 273 (401)
Q Consensus 242 ~~~~i~~~GH~~~~e~p~~v~~~i~~fl~~~~ 273 (401)
.+..+|+++|..-. ..+.+.+..|+....
T Consensus 293 ~lr~vPN~~H~~~~---~~~~~~l~~f~~~~~ 321 (367)
T PF10142_consen 293 YLRYVPNAGHSLIG---SDVVQSLRAFYNRIQ 321 (367)
T ss_pred eEEeCCCCCcccch---HHHHHHHHHHHHHHH
Confidence 67889999998755 667788889988753
No 178
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=97.19 E-value=0.0021 Score=63.07 Aligned_cols=97 Identities=18% Similarity=0.291 Sum_probs=69.0
Q ss_pred CCCcEEEeCCCCCChH--HHHHHHHHHhhCCcEEEEecCCCCC-----------------ChHHHHHHHHHHHHHh--CC
Q 015755 39 VVPPLICLPGTAGTAE--VYYKQIMALSMKGYRVISVDIPRVW-----------------NHHEWIQAFEKFLDAI--DV 97 (401)
Q Consensus 39 ~~p~vvllHG~~~~~~--~~~~~~~~L~~~g~~Vi~~D~pG~~-----------------s~~~~a~dl~~~l~~l--~~ 97 (401)
+.|.+|..+|..+-.- .|..--..|.+.|+.....|.||-| +++++..-.+-+++.- ..
T Consensus 469 ~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~ 548 (712)
T KOG2237|consen 469 SKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQP 548 (712)
T ss_pred CCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCc
Confidence 4566666666544221 3444334455578888889999853 4566666666666542 23
Q ss_pred ceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCC
Q 015755 98 HHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDT 135 (401)
Q Consensus 98 ~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~ 135 (401)
++..+.|.|.||.++..++-++|+.+.++|+-.|+.+.
T Consensus 549 ~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDv 586 (712)
T KOG2237|consen 549 SKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDV 586 (712)
T ss_pred cceeEecccCccchhHHHhccCchHhhhhhhcCcceeh
Confidence 47899999999999999999999999999988886553
No 179
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.14 E-value=0.13 Score=50.15 Aligned_cols=116 Identities=23% Similarity=0.249 Sum_probs=70.5
Q ss_pred eEEEeeC---CeeEEEEEcCC----CCCCcEEEeCCCCCChHHHHHHH---H-------------HHh------hCCcEE
Q 015755 20 LHKIPIG---TKQWRYYDFGP----KVVPPLICLPGTAGTAEVYYKQI---M-------------ALS------MKGYRV 70 (401)
Q Consensus 20 ~~~~~~~---~~~l~y~~~G~----~~~p~vvllHG~~~~~~~~~~~~---~-------------~L~------~~g~~V 70 (401)
.-+++++ +..++|..... .+.|.|+.+-|.+|.+..+-.+. + .|. .+..++
T Consensus 39 sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anl 118 (433)
T PLN03016 39 TGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANI 118 (433)
T ss_pred EEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcE
Confidence 3455553 45677765443 35689999999999887542221 1 111 023679
Q ss_pred EEecCC-CCC-----------ChHHHHHHHHHHHHHh-------CCceEEEEEEchhHHHHHHHHHh----C------Cc
Q 015755 71 ISVDIP-RVW-----------NHHEWIQAFEKFLDAI-------DVHHIHLYGTSLGGFLAQLFAQH----R------PR 121 (401)
Q Consensus 71 i~~D~p-G~~-----------s~~~~a~dl~~~l~~l-------~~~~v~lvGhS~Gg~ia~~~A~~----~------P~ 121 (401)
+.+|.| |.| +-++.++++..++..+ .-.+++|+|.|+||..+-.+|.. + +-
T Consensus 119 lfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~i 198 (433)
T PLN03016 119 IFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPI 198 (433)
T ss_pred EEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcc
Confidence 999977 321 1112335555555432 33589999999999876666553 2 12
Q ss_pred ccceEEEecCCCCC
Q 015755 122 RVRSLVLSNTFLDT 135 (401)
Q Consensus 122 ~V~~lvli~~~~~~ 135 (401)
.++|+++-++...+
T Consensus 199 nLkGi~iGNg~t~~ 212 (433)
T PLN03016 199 NLQGYMLGNPVTYM 212 (433)
T ss_pred cceeeEecCCCcCc
Confidence 57899999886543
No 180
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.14 E-value=0.044 Score=51.83 Aligned_cols=36 Identities=25% Similarity=0.377 Sum_probs=31.4
Q ss_pred eEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCC
Q 015755 99 HIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLD 134 (401)
Q Consensus 99 ~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~ 134 (401)
|++++|+|.||++|...|.-.|..|.+++=-++.+.
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 899999999999999999999999998886665443
No 181
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=97.05 E-value=0.013 Score=57.42 Aligned_cols=212 Identities=15% Similarity=0.119 Sum_probs=119.0
Q ss_pred eCCeeEEEEEcCC----CCCCcEEEeCCCCCChH--HHHHHHHHHhhCCcEEEEecCCCCC-----------------Ch
Q 015755 25 IGTKQWRYYDFGP----KVVPPLICLPGTAGTAE--VYYKQIMALSMKGYRVISVDIPRVW-----------------NH 81 (401)
Q Consensus 25 ~~~~~l~y~~~G~----~~~p~vvllHG~~~~~~--~~~~~~~~L~~~g~~Vi~~D~pG~~-----------------s~ 81 (401)
.+|.+|.|...+. .+.|++|+--|...-+. .|........++|...+.-++||-| .+
T Consensus 402 kDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vf 481 (648)
T COG1505 402 KDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVF 481 (648)
T ss_pred CCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhh
Confidence 3899999988751 23566665555443332 4555555555588888889999853 23
Q ss_pred HHHHHHHHHHHHHhCC---ceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHH
Q 015755 82 HEWIQAFEKFLDAIDV---HHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKR 158 (401)
Q Consensus 82 ~~~a~dl~~~l~~l~~---~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (401)
+++++-.+++++. |+ +++.+.|-|=||.+.-....++|+.+.++|+--|..+.-.+. .+..-..|...
T Consensus 482 dDf~AVaedLi~r-gitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh---~l~aG~sW~~E----- 552 (648)
T COG1505 482 DDFIAVAEDLIKR-GITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYH---LLTAGSSWIAE----- 552 (648)
T ss_pred HHHHHHHHHHHHh-CCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhc---ccccchhhHhh-----
Confidence 4444444444443 33 478899999999999888899999998888777643322111 00000011000
Q ss_pred HHhhccCCCCCCCchhhhHHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHc
Q 015755 159 YVLTGIHDGPHEPFIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERY 238 (401)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~ 238 (401)
.-..-..++ ...+....+...+.....--|+||-.+..|+++ .+.+++.++..+
T Consensus 553 ------------------------YG~Pd~P~d-~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRV-HPaHarKfaa~L 606 (648)
T COG1505 553 ------------------------YGNPDDPED-RAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRV-HPAHARKFAAKL 606 (648)
T ss_pred ------------------------cCCCCCHHH-HHHHHhcCchhcCCccccCCCeEEEcccccccc-cchHHHHHHHHH
Confidence 000111111 122333333333333333347899999999765 556666666655
Q ss_pred C--CCe--EEEecCCCCCCCcCChH--HHHHHHHHHHhh
Q 015755 239 S--GAR--QAYMKTGGEFPFLSRPD--EVNLHLQLHLRR 271 (401)
Q Consensus 239 ~--~~~--~~~i~~~GH~~~~e~p~--~v~~~i~~fl~~ 271 (401)
. +.. +.+=-++||..--+..+ .-...+..||.+
T Consensus 607 ~e~~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r 645 (648)
T COG1505 607 QEVGAPVLLREETKGGHGGAAPTAEIARELADLLAFLLR 645 (648)
T ss_pred HhcCCceEEEeecCCcccCCCChHHHHHHHHHHHHHHHH
Confidence 3 223 33334699976554433 223345556654
No 182
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.01 E-value=0.013 Score=52.00 Aligned_cols=53 Identities=17% Similarity=0.280 Sum_probs=40.5
Q ss_pred ChHHHHHHHHH----HHHH-h--CCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCC
Q 015755 80 NHHEWIQAFEK----FLDA-I--DVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTF 132 (401)
Q Consensus 80 s~~~~a~dl~~----~l~~-l--~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~ 132 (401)
..+.+.+.|.+ +++. + +.++-.++|||+||.+++.....+|+.+...++++|.
T Consensus 112 g~~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPS 171 (264)
T COG2819 112 GGDAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPS 171 (264)
T ss_pred ChHHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecch
Confidence 34455555444 3333 2 3346889999999999999999999999999999984
No 183
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.00 E-value=0.0082 Score=54.05 Aligned_cols=93 Identities=16% Similarity=0.151 Sum_probs=52.0
Q ss_pred CCcEEEeCCCCCCh---HHHHHHHHHHhh--CCcEEEEecCCCC----------CChHHHHHHHHHHHHHhC--CceEEE
Q 015755 40 VPPLICLPGTAGTA---EVYYKQIMALSM--KGYRVISVDIPRV----------WNHHEWIQAFEKFLDAID--VHHIHL 102 (401)
Q Consensus 40 ~p~vvllHG~~~~~---~~~~~~~~~L~~--~g~~Vi~~D~pG~----------~s~~~~a~dl~~~l~~l~--~~~v~l 102 (401)
-.|||+.||+|.+. ..+..+...+.+ .|--|.+++.-.. +.+.+.++.+.+.++... ..-+++
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~~~ 84 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIGNDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGFNA 84 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SSSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-EEE
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEECCCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcceee
Confidence 34899999999754 234443333222 3677888887432 334555555555554421 146999
Q ss_pred EEEchhHHHHHHHHHhCCc-ccceEEEecCC
Q 015755 103 YGTSLGGFLAQLFAQHRPR-RVRSLVLSNTF 132 (401)
Q Consensus 103 vGhS~Gg~ia~~~A~~~P~-~V~~lvli~~~ 132 (401)
||+|-||.++-.++.++|+ .|.-+|-+++.
T Consensus 85 IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 85 IGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp EEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred eeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 9999999999999999876 59999988874
No 184
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=96.99 E-value=0.11 Score=46.65 Aligned_cols=94 Identities=13% Similarity=0.164 Sum_probs=70.3
Q ss_pred CCcEEEeCCCCCChH-HHHHHHHHHhhCCcEEEEecCC---------CCCChHHHHHHHHHHHHHhCCceEEEEEEchhH
Q 015755 40 VPPLICLPGTAGTAE-VYYKQIMALSMKGYRVISVDIP---------RVWNHHEWIQAFEKFLDAIDVHHIHLYGTSLGG 109 (401)
Q Consensus 40 ~p~vvllHG~~~~~~-~~~~~~~~L~~~g~~Vi~~D~p---------G~~s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg 109 (401)
.|.||++-.+.+... ..+...+.|. ....|+.-||- |+++++++++-+.+.+..+|.+ +++++.+.-+
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alL-p~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP~ 180 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALL-PYHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLGPD-AHVMAVCQPT 180 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhc-cccceeEeeccccceeecccCCccHHHHHHHHHHHHHHhCCC-CcEEEEecCC
Confidence 357777777777665 4566777777 45788888873 7889999999999999999976 7777777554
Q ss_pred H-----HHHHHHHhCCcccceEEEecCCCCC
Q 015755 110 F-----LAQLFAQHRPRRVRSLVLSNTFLDT 135 (401)
Q Consensus 110 ~-----ia~~~A~~~P~~V~~lvli~~~~~~ 135 (401)
. +++..+...|..-..+++++++.+.
T Consensus 181 vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 181 VPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred chHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 4 4444444567788899999987653
No 185
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=96.94 E-value=0.34 Score=47.15 Aligned_cols=115 Identities=17% Similarity=0.259 Sum_probs=73.7
Q ss_pred eEEEeeC---CeeEEEEEcCC----CCCCcEEEeCCCCCChHHHHHHHHHHh------------------hCCcEEEEec
Q 015755 20 LHKIPIG---TKQWRYYDFGP----KVVPPLICLPGTAGTAEVYYKQIMALS------------------MKGYRVISVD 74 (401)
Q Consensus 20 ~~~~~~~---~~~l~y~~~G~----~~~p~vvllHG~~~~~~~~~~~~~~L~------------------~~g~~Vi~~D 74 (401)
.-.++++ +..++|+.... ...|.||.+-|.+|.+..- -++.++- .+-.+++.+|
T Consensus 46 sGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd 124 (454)
T KOG1282|consen 46 SGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLD 124 (454)
T ss_pred cceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEe
Confidence 3456665 68888876543 3578999999999988654 3333321 0224688888
Q ss_pred CC---CC-C---------ChHHHHHHHHHHHHH----h---CCceEEEEEEchhHHHHHHHHHh----CC------cccc
Q 015755 75 IP---RV-W---------NHHEWIQAFEKFLDA----I---DVHHIHLYGTSLGGFLAQLFAQH----RP------RRVR 124 (401)
Q Consensus 75 ~p---G~-~---------s~~~~a~dl~~~l~~----l---~~~~v~lvGhS~Gg~ia~~~A~~----~P------~~V~ 124 (401)
.| |+ | +-+..|+|+..+|.. + .-++++|.|-|++|...-.+|.. +. -.++
T Consensus 125 ~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLk 204 (454)
T KOG1282|consen 125 QPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLK 204 (454)
T ss_pred cCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccce
Confidence 87 32 1 123445665555543 2 34589999999999766665553 21 2578
Q ss_pred eEEEecCCCCC
Q 015755 125 SLVLSNTFLDT 135 (401)
Q Consensus 125 ~lvli~~~~~~ 135 (401)
|+++-++..+.
T Consensus 205 G~~IGNg~td~ 215 (454)
T KOG1282|consen 205 GYAIGNGLTDP 215 (454)
T ss_pred EEEecCcccCc
Confidence 89888886653
No 186
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.83 E-value=0.0065 Score=56.80 Aligned_cols=91 Identities=18% Similarity=0.297 Sum_probs=68.6
Q ss_pred CcEEEeCCCCCChHHHHHH---HHHHhh-CCcEEEEecCCCC-------------------CChHHHHHHHHHHHHHhCC
Q 015755 41 PPLICLPGTAGTAEVYYKQ---IMALSM-KGYRVISVDIPRV-------------------WNHHEWIQAFEKFLDAIDV 97 (401)
Q Consensus 41 p~vvllHG~~~~~~~~~~~---~~~L~~-~g~~Vi~~D~pG~-------------------~s~~~~a~dl~~~l~~l~~ 97 (401)
-||+|.-|.-++-+.|... +-.++. .+.-+|..+.|-| .+.++..+|.+.++.+++-
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 5899999999988766432 222322 2567888888754 3567777888888877743
Q ss_pred ------ceEEEEEEchhHHHHHHHHHhCCcccceEEEecC
Q 015755 98 ------HHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNT 131 (401)
Q Consensus 98 ------~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~ 131 (401)
.+|+.+|-|+||++|+.+=.+||..|.|.+..+.
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSA 200 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASA 200 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccC
Confidence 3899999999999999999999998888766554
No 187
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.82 E-value=0.009 Score=54.33 Aligned_cols=92 Identities=13% Similarity=0.089 Sum_probs=59.4
Q ss_pred CCcEEEeCCCCCChHH--HHHHHHHHhh-CCcEEEEecCCC-----C-CChHHHHHHHHHHHHH---hCCceEEEEEEch
Q 015755 40 VPPLICLPGTAGTAEV--YYKQIMALSM-KGYRVISVDIPR-----V-WNHHEWIQAFEKFLDA---IDVHHIHLYGTSL 107 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~--~~~~~~~L~~-~g~~Vi~~D~pG-----~-~s~~~~a~dl~~~l~~---l~~~~v~lvGhS~ 107 (401)
..|+|+.||+|.+... ...+.+.+.+ .|..+.++..=. + +.+.+.++.+-+-+.. +. .-+++||+|-
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~ig~~~~~s~~~~~~~Qve~vce~l~~~~~l~-~G~naIGfSQ 103 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEIGNGVGDSWLMPLTQQAEIACEKVKQMKELS-QGYNIVGRSQ 103 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEECCCccccceeCHHHHHHHHHHHHhhchhhh-CcEEEEEEcc
Confidence 3589999999986642 2333333322 245555554421 1 2444444444333332 32 3599999999
Q ss_pred hHHHHHHHHHhCCc--ccceEEEecCC
Q 015755 108 GGFLAQLFAQHRPR--RVRSLVLSNTF 132 (401)
Q Consensus 108 Gg~ia~~~A~~~P~--~V~~lvli~~~ 132 (401)
||.++-.++.+.|+ .|+.+|-+++.
T Consensus 104 GGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 104 GNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred chHHHHHHHHHCCCCCCcceEEEecCC
Confidence 99999999999987 59999998874
No 188
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.81 E-value=0.0076 Score=56.21 Aligned_cols=81 Identities=17% Similarity=0.254 Sum_probs=64.6
Q ss_pred CcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC----ChHHHHHHHHHHHHHh----CCceEEEEEEchhHHHH
Q 015755 41 PPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW----NHHEWIQAFEKFLDAI----DVHHIHLYGTSLGGFLA 112 (401)
Q Consensus 41 p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~----s~~~~a~dl~~~l~~l----~~~~v~lvGhS~Gg~ia 112 (401)
..-||+.|=|+-...=.++..+|+++|+.|+.+|-.-|+ +.++.++|+..+++.. +.+++.|+|+|+|+-+.
T Consensus 261 ~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvl 340 (456)
T COG3946 261 TVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSERTPEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVL 340 (456)
T ss_pred eEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccCCHHHHHHHHHHHHHHHHHhhCcceEEEEeecccchhh
Confidence 356777777777766677888999999999999976653 6789999999888765 56799999999999987
Q ss_pred HHHHHhCCc
Q 015755 113 QLFAQHRPR 121 (401)
Q Consensus 113 ~~~A~~~P~ 121 (401)
-..-.+.|.
T Consensus 341 P~~~n~L~~ 349 (456)
T COG3946 341 PFAYNRLPP 349 (456)
T ss_pred HHHHHhCCH
Confidence 665555553
No 189
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=96.72 E-value=0.014 Score=51.63 Aligned_cols=92 Identities=15% Similarity=0.176 Sum_probs=61.1
Q ss_pred CcEEEeCCCCCChHH--HHHHHHHHhh-CCcEEEEecCC-C--CCChHHHHHHHHHHHHHhCC-----ceEEEEEEchhH
Q 015755 41 PPLICLPGTAGTAEV--YYKQIMALSM-KGYRVISVDIP-R--VWNHHEWIQAFEKFLDAIDV-----HHIHLYGTSLGG 109 (401)
Q Consensus 41 p~vvllHG~~~~~~~--~~~~~~~L~~-~g~~Vi~~D~p-G--~~s~~~~a~dl~~~l~~l~~-----~~v~lvGhS~Gg 109 (401)
-|+|++||++.+... ...+.+.+.+ .|..|+++|.- | .+.+.-+-+.+..+.+.++. .-++++|.|-||
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig~g~~~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~SQGg 103 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIGDGIKDSSLMPLWEQVDVACEKVKQMPELSQGYNIVGYSQGG 103 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEecCCcchhhhccHHHHHHHHHHHHhcchhccCceEEEEEcccc
Confidence 589999999987765 5555555543 27888888873 2 12222233333333333322 358999999999
Q ss_pred HHHHHHHHhCCc-ccceEEEecCC
Q 015755 110 FLAQLFAQHRPR-RVRSLVLSNTF 132 (401)
Q Consensus 110 ~ia~~~A~~~P~-~V~~lvli~~~ 132 (401)
.++-.++...++ .|..+|-++++
T Consensus 104 lv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 104 LVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred HHHHHHHHhCCCCCcceeEeccCC
Confidence 999999988765 47888877753
No 190
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=96.70 E-value=0.004 Score=59.82 Aligned_cols=96 Identities=14% Similarity=0.148 Sum_probs=63.4
Q ss_pred CCCcEEEeCCCCC---ChHHHHHHHHHHhhCC-cEEEEecCC----CCCC---------------hHHH---HHHHHHHH
Q 015755 39 VVPPLICLPGTAG---TAEVYYKQIMALSMKG-YRVISVDIP----RVWN---------------HHEW---IQAFEKFL 92 (401)
Q Consensus 39 ~~p~vvllHG~~~---~~~~~~~~~~~L~~~g-~~Vi~~D~p----G~~s---------------~~~~---a~dl~~~l 92 (401)
+.|++|+|||.+- +......--..|+++| +-|+++++| ||.. +.|+ .+.+.+-|
T Consensus 93 ~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~NI 172 (491)
T COG2272 93 KLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDNI 172 (491)
T ss_pred CCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHHH
Confidence 4589999999863 3333222235677677 999999997 4321 1222 23456667
Q ss_pred HHhCCc--eEEEEEEchhHHHHHHHHHh--CCcccceEEEecCCCC
Q 015755 93 DAIDVH--HIHLYGTSLGGFLAQLFAQH--RPRRVRSLVLSNTFLD 134 (401)
Q Consensus 93 ~~l~~~--~v~lvGhS~Gg~ia~~~A~~--~P~~V~~lvli~~~~~ 134 (401)
+++|.+ +|.|+|+|.||+.++.+.+. ....+.++|+.++.+.
T Consensus 173 e~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 173 EAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 777765 79999999999988776553 2235777777777553
No 191
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.63 E-value=0.0054 Score=50.66 Aligned_cols=49 Identities=24% Similarity=0.203 Sum_probs=33.9
Q ss_pred HHHHHHHHHHH----hCCceEEEEEEchhHHHHHHHHHhCCc----ccceEEEecCC
Q 015755 84 WIQAFEKFLDA----IDVHHIHLYGTSLGGFLAQLFAQHRPR----RVRSLVLSNTF 132 (401)
Q Consensus 84 ~a~dl~~~l~~----l~~~~v~lvGhS~Gg~ia~~~A~~~P~----~V~~lvli~~~ 132 (401)
+.+.+...++. ....+++++|||+||.+|..++..... .+..++..+++
T Consensus 10 ~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p 66 (153)
T cd00741 10 LANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPP 66 (153)
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCC
Confidence 33444444433 356799999999999999998887654 45566666653
No 192
>COG0627 Predicted esterase [General function prediction only]
Probab=96.54 E-value=0.0066 Score=56.20 Aligned_cols=97 Identities=21% Similarity=0.314 Sum_probs=64.8
Q ss_pred CCcEEEeCCCCCChHHHHHH--HH-HHhhCCcEEEEecCC--------------C----C-------------CChHH-H
Q 015755 40 VPPLICLPGTAGTAEVYYKQ--IM-ALSMKGYRVISVDIP--------------R----V-------------WNHHE-W 84 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~~~~~--~~-~L~~~g~~Vi~~D~p--------------G----~-------------~s~~~-~ 84 (401)
-|+++++||..++...|... ++ .....++.++.+|-. | + +.+++ +
T Consensus 54 ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tfl 133 (316)
T COG0627 54 IPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETFL 133 (316)
T ss_pred CCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHHH
Confidence 46889999999886443221 22 233346777776432 2 1 12233 3
Q ss_pred HHHHHHHHH-HhCC----ceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCCh
Q 015755 85 IQAFEKFLD-AIDV----HHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTH 136 (401)
Q Consensus 85 a~dl~~~l~-~l~~----~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~ 136 (401)
.+.+...++ ++.. .+..++||||||.=|+.+|++||+++..+.-.++...+.
T Consensus 134 ~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 134 TQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred HhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 456664444 3332 268899999999999999999999999999888876654
No 193
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.52 E-value=0.0061 Score=49.36 Aligned_cols=37 Identities=30% Similarity=0.428 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHh
Q 015755 82 HEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQH 118 (401)
Q Consensus 82 ~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~ 118 (401)
+++.+.+..+++..+..++++.|||+||.+|..++..
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 3455667777777676789999999999999888875
No 194
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=96.23 E-value=0.013 Score=58.97 Aligned_cols=94 Identities=13% Similarity=0.155 Sum_probs=56.0
Q ss_pred CCcEEEeCCCCCC---h-HHHHHHHHHHhhCCcEEEEecCC----CCC------------ChHHH---HHHHHHHHHHhC
Q 015755 40 VPPLICLPGTAGT---A-EVYYKQIMALSMKGYRVISVDIP----RVW------------NHHEW---IQAFEKFLDAID 96 (401)
Q Consensus 40 ~p~vvllHG~~~~---~-~~~~~~~~~L~~~g~~Vi~~D~p----G~~------------s~~~~---a~dl~~~l~~l~ 96 (401)
.|++|+|||.+-. . .....-...+..++.-|+.+.+| |+. .+.|. .+.|.+-|.++|
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FG 204 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFG 204 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGT
T ss_pred cceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhcc
Confidence 4899999997642 2 12223334445578999999997 321 11122 234455556666
Q ss_pred Cc--eEEEEEEchhHHHHHHHHHh--CCcccceEEEecCCC
Q 015755 97 VH--HIHLYGTSLGGFLAQLFAQH--RPRRVRSLVLSNTFL 133 (401)
Q Consensus 97 ~~--~v~lvGhS~Gg~ia~~~A~~--~P~~V~~lvli~~~~ 133 (401)
.+ +|.|+|||.||..+..+... ....+.++|+.++..
T Consensus 205 GDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 205 GDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred cCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 54 79999999999988776665 235799999998843
No 195
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.13 E-value=0.031 Score=47.08 Aligned_cols=99 Identities=23% Similarity=0.225 Sum_probs=61.9
Q ss_pred EcCCCC--CCcEEEeCCCCCChHHH----HH----HHHH----H--hhCCcEEEEecCCCCC-------------ChHHH
Q 015755 34 DFGPKV--VPPLICLPGTAGTAEVY----YK----QIMA----L--SMKGYRVISVDIPRVW-------------NHHEW 84 (401)
Q Consensus 34 ~~G~~~--~p~vvllHG~~~~~~~~----~~----~~~~----L--~~~g~~Vi~~D~pG~~-------------s~~~~ 84 (401)
..|+.+ ..+.++++|.+.+.... .. +... + ...+-.|-++-|.||- .-+.-
T Consensus 11 a~GD~d~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~g 90 (177)
T PF06259_consen 11 AVGDPDTADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAG 90 (177)
T ss_pred EECCcCCcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHH
Confidence 445432 34789999998765422 11 1111 1 1122345444444441 12445
Q ss_pred HHHHHHHHHHhCC-----ceEEEEEEchhHHHHHHHHHhCCcccceEEEecCC
Q 015755 85 IQAFEKFLDAIDV-----HHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTF 132 (401)
Q Consensus 85 a~dl~~~l~~l~~-----~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~ 132 (401)
+.+|..|++.+.. .++.++|||+|+.++-..+...+..+..+|+++++
T Consensus 91 a~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 91 APRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 5667777766532 37899999999999988887767889999998864
No 196
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.09 E-value=0.068 Score=45.58 Aligned_cols=93 Identities=17% Similarity=0.274 Sum_probs=60.9
Q ss_pred CCcEEEeCCCCCCh-HHHHH---------------HHHHHhhCCcEEEEecCCC---CC-----------ChHHHHHH-H
Q 015755 40 VPPLICLPGTAGTA-EVYYK---------------QIMALSMKGYRVISVDIPR---VW-----------NHHEWIQA-F 88 (401)
Q Consensus 40 ~p~vvllHG~~~~~-~~~~~---------------~~~~L~~~g~~Vi~~D~pG---~~-----------s~~~~a~d-l 88 (401)
...+|+|||-|--. ..|.. .+..-.+.||.|++.+.-. ++ +..+.+.- .
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw 180 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVW 180 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHH
Confidence 34799999998643 24532 2333334699999887531 11 22233332 2
Q ss_pred HHHHHHhCCceEEEEEEchhHHHHHHHHHhCCc--ccceEEEecCC
Q 015755 89 EKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPR--RVRSLVLSNTF 132 (401)
Q Consensus 89 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~--~V~~lvli~~~ 132 (401)
..++.....+.+.++.||+||...+.+..++|+ +|.++.|-++.
T Consensus 181 ~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 181 KNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 334444566789999999999999999999985 57777776664
No 197
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.03 E-value=0.014 Score=57.71 Aligned_cols=80 Identities=13% Similarity=0.202 Sum_probs=54.5
Q ss_pred HHHHHHHHHhhCCcE-----EEEecCCCCC----ChHHHHHHHHHHHHHh----CCceEEEEEEchhHHHHHHHHHhC--
Q 015755 55 VYYKQIMALSMKGYR-----VISVDIPRVW----NHHEWIQAFEKFLDAI----DVHHIHLYGTSLGGFLAQLFAQHR-- 119 (401)
Q Consensus 55 ~~~~~~~~L~~~g~~-----Vi~~D~pG~~----s~~~~a~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~A~~~-- 119 (401)
.|..+++.|+..||. ...+|+|=-+ ..+++-..+..+++.. +-++|+||||||||.+++.+...-
T Consensus 157 vw~kLIe~L~~iGY~~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~ 236 (642)
T PLN02517 157 VWAVLIANLARIGYEEKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEA 236 (642)
T ss_pred eHHHHHHHHHHcCCCCCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccc
Confidence 678999999988886 3344554221 1245555566655533 457999999999999999876632
Q ss_pred ---------C----cccceEEEecCCCC
Q 015755 120 ---------P----RRVRSLVLSNTFLD 134 (401)
Q Consensus 120 ---------P----~~V~~lvli~~~~~ 134 (401)
+ ..|++.|.|+++..
T Consensus 237 ~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 237 PAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred cccccCCcchHHHHHHHHHheecccccC
Confidence 1 24788898887643
No 198
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=95.97 E-value=0.018 Score=54.99 Aligned_cols=79 Identities=16% Similarity=0.212 Sum_probs=55.5
Q ss_pred HHHHHHHHHHhhCCcE------EEEecCCCCC----ChHHHHHH----HHHHHHHhCCceEEEEEEchhHHHHHHHHHhC
Q 015755 54 EVYYKQIMALSMKGYR------VISVDIPRVW----NHHEWIQA----FEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHR 119 (401)
Q Consensus 54 ~~~~~~~~~L~~~g~~------Vi~~D~pG~~----s~~~~a~d----l~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~ 119 (401)
..|..+++.|..-||. -..+|+|=-+ ..+++... |+...+.-|.++|+||+||||+.+.+.+...+
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~ 203 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWV 203 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcc
Confidence 4788899999876776 4668887522 23344444 44444445668999999999999999999888
Q ss_pred Cc--------ccceEEEecCC
Q 015755 120 PR--------RVRSLVLSNTF 132 (401)
Q Consensus 120 P~--------~V~~lvli~~~ 132 (401)
++ .+++.|-+++.
T Consensus 204 ~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 204 EAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred cccchhHHHHHHHHHHccCch
Confidence 76 35666655543
No 199
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.82 E-value=0.041 Score=52.92 Aligned_cols=94 Identities=15% Similarity=0.206 Sum_probs=73.5
Q ss_pred CCCCCcEEEeCCCCCChHHH--------HHHHHHHhhCCcEEEEecCCCCC----------------ChHHHHHHHHHHH
Q 015755 37 PKVVPPLICLPGTAGTAEVY--------YKQIMALSMKGYRVISVDIPRVW----------------NHHEWIQAFEKFL 92 (401)
Q Consensus 37 ~~~~p~vvllHG~~~~~~~~--------~~~~~~L~~~g~~Vi~~D~pG~~----------------s~~~~a~dl~~~l 92 (401)
.+++|..|||-|=+.-...| ..++.+ -|..|+.++.|=|| ++++..+|+..+|
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~Akk---fgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI 159 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKK---FGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFI 159 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccccCcchHHHHHHH---hCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHH
Confidence 34578888888876655333 333333 37889999998775 5678899999999
Q ss_pred HHhCC-------ceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCC
Q 015755 93 DAIDV-------HHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFL 133 (401)
Q Consensus 93 ~~l~~-------~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~ 133 (401)
++++. .+.+.+|-|+-|.+++.+=.+||+.|.|-|..+.+.
T Consensus 160 ~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 160 KAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred HHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 88753 278999999999999999999999999999877754
No 200
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=95.80 E-value=0.016 Score=39.74 Aligned_cols=40 Identities=13% Similarity=0.215 Sum_probs=22.3
Q ss_pred CCceEEEee-CCeeEEEEEcCCC--------CCCcEEEeCCCCCChHHH
Q 015755 17 QVPLHKIPI-GTKQWRYYDFGPK--------VVPPLICLPGTAGTAEVY 56 (401)
Q Consensus 17 ~~~~~~~~~-~~~~l~y~~~G~~--------~~p~vvllHG~~~~~~~~ 56 (401)
+.+.+.+++ ||..|.....-.+ .+|+|++.||+.+++..|
T Consensus 11 ~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 11 PCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp --EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred CcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 356677777 7777766554332 478999999999999988
No 201
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.67 E-value=0.026 Score=50.09 Aligned_cols=47 Identities=26% Similarity=0.261 Sum_probs=31.1
Q ss_pred HHHHHHhCCceEEEEEEchhHHHHHHHHHhC-----CcccceEEEecCCCCC
Q 015755 89 EKFLDAIDVHHIHLYGTSLGGFLAQLFAQHR-----PRRVRSLVLSNTFLDT 135 (401)
Q Consensus 89 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~-----P~~V~~lvli~~~~~~ 135 (401)
...++.....++++.|||+||.+|..++... +..+..+.+-+|....
T Consensus 119 ~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~vg~ 170 (229)
T cd00519 119 KSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRVGN 170 (229)
T ss_pred HHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCCCC
Confidence 3333333456899999999999998887753 3345655555554443
No 202
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.55 E-value=0.041 Score=48.44 Aligned_cols=82 Identities=18% Similarity=0.193 Sum_probs=49.3
Q ss_pred CCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCCChHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhC
Q 015755 40 VPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHR 119 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~ 119 (401)
+..+|.+-|--.+...|..-+..- |. ...|. -...++-+..+++..+. ++++.|||.||.+|..+|...
T Consensus 37 ~~~~vaFRGTd~t~~~W~ed~~~~----~~---~~~~~---q~~A~~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~ 105 (224)
T PF11187_consen 37 GEYVVAFRGTDDTLVDWKEDFNMS----FQ---DETPQ---QKSALAYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANC 105 (224)
T ss_pred CeEEEEEECCCCchhhHHHHHHhh----cC---CCCHH---HHHHHHHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHc
Confidence 445666666655555676533211 11 01111 12333445555555543 599999999999999998874
Q ss_pred C----cccceEEEecCC
Q 015755 120 P----RRVRSLVLSNTF 132 (401)
Q Consensus 120 P----~~V~~lvli~~~ 132 (401)
+ ++|.+++..+++
T Consensus 106 ~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 106 DDEIQDRISKVYSFDGP 122 (224)
T ss_pred cHHHhhheeEEEEeeCC
Confidence 3 578888877764
No 203
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.25 E-value=0.7 Score=43.30 Aligned_cols=228 Identities=14% Similarity=0.084 Sum_probs=117.5
Q ss_pred CCCCCCcEEEeCCCCCChHHH-HHHHHHHhhCCcEEEEecCCCC----------CChHHHHHHHHHHHHHhC--CceEEE
Q 015755 36 GPKVVPPLICLPGTAGTAEVY-YKQIMALSMKGYRVISVDIPRV----------WNHHEWIQAFEKFLDAID--VHHIHL 102 (401)
Q Consensus 36 G~~~~p~vvllHG~~~~~~~~-~~~~~~L~~~g~~Vi~~D~pG~----------~s~~~~a~dl~~~l~~l~--~~~v~l 102 (401)
|.....+||++=||.+..+-| .+......++|+.++-+-.|-+ .+......-+..++...+ ..++++
T Consensus 34 g~~s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~f 113 (350)
T KOG2521|consen 34 GGESEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNSDPCPIIF 113 (350)
T ss_pred CCCccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccCCcCceEE
Confidence 433343566666666655544 3445556667999999888865 234455566777777666 347777
Q ss_pred EEEchhHHHHHHHH---H-hC-C---cccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCCCCCCCch-
Q 015755 103 YGTSLGGFLAQLFA---Q-HR-P---RRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHDGPHEPFI- 173 (401)
Q Consensus 103 vGhS~Gg~ia~~~A---~-~~-P---~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 173 (401)
--+|+||...+... . ++ | +.+.+++..+.+.......... .......+......+..............
T Consensus 114 h~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~--a~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 191 (350)
T KOG2521|consen 114 HVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGW--AVSFSSPPDDYVARWARLNYHITLLTMAGN 191 (350)
T ss_pred EEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcc--eeccccCchhhHHHHHhcCeEEEEEEeeec
Confidence 79999998765433 1 12 2 3456677766554432221111 11111111111111111100000000000
Q ss_pred ---hhhHHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcC----CCeEEEe
Q 015755 174 ---ADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYS----GARQAYM 246 (401)
Q Consensus 174 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i 246 (401)
..................+..++... ......+.+.+.+..| .+++.+..+.+.+... +.+.+.+
T Consensus 192 ~~~~~~~~~~~~~~~~~r~~~~~~r~~~~-------~~~~~~~~ly~~s~~d-~v~~~~~ie~f~~~~~~~g~~v~s~~~ 263 (350)
T KOG2521|consen 192 EGGAYLLGPLAEKISMSRKYHFLDRYEEQ-------RNELPWNQLYLYSDND-DVLPADEIEKFIALRREKGVNVKSVKF 263 (350)
T ss_pred ccchhhhhhhhhccccccchHHHHHHHhh-------hhcccccceeecCCcc-ccccHHHHHHHHHHHHhcCceEEEeec
Confidence 00111111111101111111112111 1112345788889999 6899998888855442 3455667
Q ss_pred cCCCCCCCcC-ChHHHHHHHHHHHhhcc
Q 015755 247 KTGGEFPFLS-RPDEVNLHLQLHLRRVG 273 (401)
Q Consensus 247 ~~~GH~~~~e-~p~~v~~~i~~fl~~~~ 273 (401)
.++-|..++. .|..+.+...+|++...
T Consensus 264 ~ds~H~~h~r~~p~~y~~~~~~Fl~~~~ 291 (350)
T KOG2521|consen 264 KDSEHVAHFRSFPKTYLKKCSEFLRSVI 291 (350)
T ss_pred cCccceeeeccCcHHHHHHHHHHHHhcc
Confidence 7888987764 79999999999998764
No 204
>PLN02454 triacylglycerol lipase
Probab=95.04 E-value=0.064 Score=51.12 Aligned_cols=54 Identities=24% Similarity=0.289 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhCCc--eEEEEEEchhHHHHHHHHHhC------C--cccceEEEecCCCCChh
Q 015755 84 WIQAFEKFLDAIDVH--HIHLYGTSLGGFLAQLFAQHR------P--RRVRSLVLSNTFLDTHS 137 (401)
Q Consensus 84 ~a~dl~~~l~~l~~~--~v~lvGhS~Gg~ia~~~A~~~------P--~~V~~lvli~~~~~~~~ 137 (401)
+...|..+++..... ++++.|||+||.+|+.+|... + -.|..+++-+|-.....
T Consensus 212 vl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRVGN~~ 275 (414)
T PLN02454 212 LLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQVGNKE 275 (414)
T ss_pred HHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCcccCHH
Confidence 444455555555444 499999999999999888542 1 12445555555444443
No 205
>PLN02571 triacylglycerol lipase
Probab=95.02 E-value=0.071 Score=50.87 Aligned_cols=37 Identities=24% Similarity=0.363 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHhCCc--eEEEEEEchhHHHHHHHHHh
Q 015755 82 HEWIQAFEKFLDAIDVH--HIHLYGTSLGGFLAQLFAQH 118 (401)
Q Consensus 82 ~~~a~dl~~~l~~l~~~--~v~lvGhS~Gg~ia~~~A~~ 118 (401)
+++.++|..+++..... ++++.|||+||.+|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45667777777766543 68999999999999988764
No 206
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=94.79 E-value=0.075 Score=41.12 Aligned_cols=44 Identities=23% Similarity=0.295 Sum_probs=28.3
Q ss_pred CCceEEEeeCCeeEEEEEcCC--CCCCcEEEeCCCCCChHHHHHHH
Q 015755 17 QVPLHKIPIGTKQWRYYDFGP--KVVPPLICLPGTAGTAEVYYKQI 60 (401)
Q Consensus 17 ~~~~~~~~~~~~~l~y~~~G~--~~~p~vvllHG~~~~~~~~~~~~ 60 (401)
.++.-.++++|..|||...-+ ++..||||+||++++-..|.+++
T Consensus 67 ~~phf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~vI 112 (112)
T PF06441_consen 67 SFPHFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKVI 112 (112)
T ss_dssp TS-EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHHH
T ss_pred cCCCeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhhC
Confidence 566777888999999976543 24459999999999988876653
No 207
>PLN02162 triacylglycerol lipase
Probab=94.72 E-value=0.14 Score=49.43 Aligned_cols=35 Identities=34% Similarity=0.330 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHH
Q 015755 83 EWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQ 117 (401)
Q Consensus 83 ~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~ 117 (401)
++.+.+..++......++++.|||+||.+|..+|.
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 34455666666666668999999999999988765
No 208
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=94.45 E-value=0.3 Score=45.26 Aligned_cols=163 Identities=14% Similarity=0.045 Sum_probs=85.0
Q ss_pred HHHHHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhHhhcCCcccccccchhhHHHHHHhhccCCCC
Q 015755 89 EKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSWTPSFLLKRYVLTGIHDGP 168 (401)
Q Consensus 89 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (401)
.+.+..+.++.+++-|-|--|+.+...|...| +|.++|-.....-. ....+.. ....+.+..
T Consensus 225 q~eL~q~~Ik~F~VTGaSKRgWttwLTAIaDp-rv~aIvp~v~D~Ln---------------i~a~L~h--iyrsYGgnw 286 (507)
T COG4287 225 QDELEQVEIKGFMVTGASKRGWTTWLTAIADP-RVFAIVPFVYDNLN---------------IEAQLLH--IYRSYGGNW 286 (507)
T ss_pred HhhhhheeeeeEEEeccccchHHHHHHHhcCc-chhhhhhhHHhhcc---------------cHHHHHH--HHHhhCCCC
Confidence 34455567788999999999999888887776 56666643321100 0001111 111111122
Q ss_pred CCCchhhhHHHHHHhhhhcCHHHHHHHhhhhcccccccccccCCcEEEEEeCCCCCCCcHHHHHHHHHHcCCC-eEEEec
Q 015755 169 HEPFIADSVDFVVCQVETLSREDLASRLTLTADAASVGNLLLSDSHITIMDTNDYCATSQQLKDQLSERYSGA-RQAYMK 247 (401)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlli~G~~D~~~~~~~~~~~~~~~~~~~-~~~~i~ 247 (401)
...+..-..+.+.+....-....+.....-.......-...+..|..+|.+..|+ +.+++.+......+|+. -+..+|
T Consensus 287 pi~l~pyyaegi~erl~tp~fkqL~~IiDPlay~~try~~RLalpKyivnaSgDd-ff~pDsa~lYyd~LPG~kaLrmvP 365 (507)
T COG4287 287 PIKLAPYYAEGIDERLETPLFKQLLEIIDPLAYRNTRYQLRLALPKYIVNASGDD-FFVPDSANLYYDDLPGEKALRMVP 365 (507)
T ss_pred CcccchhHhhhHHHhhcCHHHHHHHHhhcHHHHhhhhhhhhccccceeecccCCc-ccCCCccceeeccCCCceeeeeCC
Confidence 2222222222222222111111111111111111111123456678999999996 56677788888888875 467889
Q ss_pred CCCCCCCcCChHHHHHHHHHHHhhcc
Q 015755 248 TGGEFPFLSRPDEVNLHLQLHLRRVG 273 (401)
Q Consensus 248 ~~GH~~~~e~p~~v~~~i~~fl~~~~ 273 (401)
+..|.. .+..+.+.+..|+.+..
T Consensus 366 N~~H~~---~n~~i~esl~~flnrfq 388 (507)
T COG4287 366 NDPHNL---INQFIKESLEPFLNRFQ 388 (507)
T ss_pred CCcchh---hHHHHHHHHHHHHHHHh
Confidence 999974 34556666777776643
No 209
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=94.12 E-value=0.92 Score=48.52 Aligned_cols=93 Identities=15% Similarity=0.127 Sum_probs=65.9
Q ss_pred CCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCC---CCCChHHHHHHHHHHHHHhCC-ceEEEEEEchhHHHHHH
Q 015755 39 VVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIP---RVWNHHEWIQAFEKFLDAIDV-HHIHLYGTSLGGFLAQL 114 (401)
Q Consensus 39 ~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~p---G~~s~~~~a~dl~~~l~~l~~-~~v~lvGhS~Gg~ia~~ 114 (401)
..|+++|+|.+-+....+..++..|. +..+.+..- -.-++++.++-...-++.+.. .+..++|+|+|+.++..
T Consensus 2122 e~~~~Ffv~pIEG~tt~l~~la~rle---~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~GYSyG~~l~f~ 2198 (2376)
T KOG1202|consen 2122 EEPPLFFVHPIEGFTTALESLASRLE---IPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAGYSYGACLAFE 2198 (2376)
T ss_pred cCCceEEEeccccchHHHHHHHhhcC---CcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeeccchhHHHHHH
Confidence 47899999999998888877776664 222222211 113677777776666766654 48999999999999999
Q ss_pred HHHhC--CcccceEEEecCCCC
Q 015755 115 FAQHR--PRRVRSLVLSNTFLD 134 (401)
Q Consensus 115 ~A~~~--P~~V~~lvli~~~~~ 134 (401)
+|... .+....+|++++.+.
T Consensus 2199 ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2199 MASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred HHHHHHhhcCCCcEEEecCchH
Confidence 98753 334566999988653
No 210
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=93.94 E-value=0.6 Score=42.40 Aligned_cols=104 Identities=14% Similarity=0.191 Sum_probs=62.8
Q ss_pred eEEEEEcCCC---CCCcEEEeCCCCCC--hHHHHHHHHHHhhC----CcEEEEecCCC-------CCChHHHHHHH----
Q 015755 29 QWRYYDFGPK---VVPPLICLPGTAGT--AEVYYKQIMALSMK----GYRVISVDIPR-------VWNHHEWIQAF---- 88 (401)
Q Consensus 29 ~l~y~~~G~~---~~p~vvllHG~~~~--~~~~~~~~~~L~~~----g~~Vi~~D~pG-------~~s~~~~a~dl---- 88 (401)
.+.|...|.. .-|.++++||---. ...+ .+++.|... .-.++.+|.-- ++..+++.+.|
T Consensus 84 ~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~-~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eL 162 (299)
T COG2382 84 RVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIP-RILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQEL 162 (299)
T ss_pred EEEEeCCCCCccccccEEEEeccHHHHhcCChH-HHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHh
Confidence 3444444432 35788999974321 1122 234444333 34577777643 23444444443
Q ss_pred HHHHHH-hCC----ceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCC
Q 015755 89 EKFLDA-IDV----HHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFL 133 (401)
Q Consensus 89 ~~~l~~-l~~----~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~ 133 (401)
.=+++. +.. ..-+|+|-|+||.+++..+.+||+++-.++.-++..
T Consensus 163 lP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 163 LPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred hhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 333332 221 246899999999999999999999999999888753
No 211
>PLN00413 triacylglycerol lipase
Probab=93.84 E-value=0.11 Score=50.27 Aligned_cols=35 Identities=31% Similarity=0.483 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHH
Q 015755 83 EWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQ 117 (401)
Q Consensus 83 ~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~ 117 (401)
++.+.+..+++.....++++.|||+||.+|..+|.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 45567777777777778999999999999998875
No 212
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=93.78 E-value=0.12 Score=48.58 Aligned_cols=76 Identities=17% Similarity=0.229 Sum_probs=50.8
Q ss_pred CCcEEEeCCCCC-ChHHHHHHHHHHhhC--CcEEEEecCCCCCC---------hHHHHHHHHHHHHHhCCceEEEEEEch
Q 015755 40 VPPLICLPGTAG-TAEVYYKQIMALSMK--GYRVISVDIPRVWN---------HHEWIQAFEKFLDAIDVHHIHLYGTSL 107 (401)
Q Consensus 40 ~p~vvllHG~~~-~~~~~~~~~~~L~~~--g~~Vi~~D~pG~~s---------~~~~a~dl~~~l~~l~~~~v~lvGhS~ 107 (401)
...+|+.||+-+ +...|...+.....+ +..++.....|... -+.+++++.+.+....++++-.+|||+
T Consensus 80 ~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvghSL 159 (405)
T KOG4372|consen 80 KHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFVGHSL 159 (405)
T ss_pred ceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeeeeeec
Confidence 458999999998 667787777766643 33344444443311 134566666666666678999999999
Q ss_pred hHHHHHHH
Q 015755 108 GGFLAQLF 115 (401)
Q Consensus 108 Gg~ia~~~ 115 (401)
||.++..+
T Consensus 160 GGLvar~A 167 (405)
T KOG4372|consen 160 GGLVARYA 167 (405)
T ss_pred CCeeeeEE
Confidence 99887543
No 213
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=93.63 E-value=0.18 Score=42.79 Aligned_cols=84 Identities=15% Similarity=0.139 Sum_probs=49.9
Q ss_pred CChHHHHHHHHHHh-hCCcEEEEecCCCCCC-----------hHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHh
Q 015755 51 GTAEVYYKQIMALS-MKGYRVISVDIPRVWN-----------HHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQH 118 (401)
Q Consensus 51 ~~~~~~~~~~~~L~-~~g~~Vi~~D~pG~~s-----------~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~ 118 (401)
.....+...+.... .....+..+++|-... ..++.+.+..........+++|+|+|.||.++..++..
T Consensus 22 ~~g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~ 101 (179)
T PF01083_consen 22 RVGPPFADALQAQPGGTSVAVQGVEYPASLGPNSYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSG 101 (179)
T ss_dssp CCHHHHHHHHHHHCTTCEEEEEE--S---SCGGSCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred cccHHHHHHHHhhcCCCeeEEEecCCCCCCCcccccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHh
Confidence 33444444444332 2345677778885422 23444455555555666799999999999999998877
Q ss_pred ------CCcccceEEEecCCCC
Q 015755 119 ------RPRRVRSLVLSNTFLD 134 (401)
Q Consensus 119 ------~P~~V~~lvli~~~~~ 134 (401)
..++|.++|+++-+..
T Consensus 102 ~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 102 DGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp TTSSHHHHHHEEEEEEES-TTT
T ss_pred ccCChhhhhhEEEEEEecCCcc
Confidence 2357889998886543
No 214
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.62 E-value=0.17 Score=41.65 Aligned_cols=105 Identities=15% Similarity=0.222 Sum_probs=62.9
Q ss_pred eEEEEEcCCCCCCcEEEeCCCCCChHHHHHH--HHHHh---hCC-cEEEEecCC-------CCCChHHHHH----HHHHH
Q 015755 29 QWRYYDFGPKVVPPLICLPGTAGTAEVYYKQ--IMALS---MKG-YRVISVDIP-------RVWNHHEWIQ----AFEKF 91 (401)
Q Consensus 29 ~l~y~~~G~~~~p~vvllHG~~~~~~~~~~~--~~~L~---~~g-~~Vi~~D~p-------G~~s~~~~a~----dl~~~ 91 (401)
.+.+..+|.. +-+||+++--++....|..+ +..|+ +.| ...++++-. +|-...+-++ --.-+
T Consensus 16 dMel~ryGHa-G~pVvvFpts~Grf~eyed~G~v~ala~fie~G~vQlft~~gldsESf~a~h~~~adr~~rH~AyerYv 94 (227)
T COG4947 16 DMELNRYGHA-GIPVVVFPTSGGRFNEYEDFGMVDALASFIEEGLVQLFTLSGLDSESFLATHKNAADRAERHRAYERYV 94 (227)
T ss_pred hhhhhhccCC-CCcEEEEecCCCcchhhhhcccHHHHHHHHhcCcEEEEEecccchHhHhhhcCCHHHHHHHHHHHHHHH
Confidence 4556677775 45666777666666665443 22332 233 333444321 1222222222 22223
Q ss_pred HHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCC
Q 015755 92 LDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLD 134 (401)
Q Consensus 92 l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~ 134 (401)
+++.-....++-|.||||+-|+.+..++|+...++|.+++..+
T Consensus 95 ~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 95 IEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred HHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 3333234577789999999999999999999999999988544
No 215
>PLN02408 phospholipase A1
Probab=93.58 E-value=0.11 Score=48.88 Aligned_cols=36 Identities=25% Similarity=0.308 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHhCCc--eEEEEEEchhHHHHHHHHHh
Q 015755 83 EWIQAFEKFLDAIDVH--HIHLYGTSLGGFLAQLFAQH 118 (401)
Q Consensus 83 ~~a~dl~~~l~~l~~~--~v~lvGhS~Gg~ia~~~A~~ 118 (401)
++.+.|..+++..+.. ++++.|||+||.+|..+|..
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 4456666777666543 58999999999999888764
No 216
>PLN02934 triacylglycerol lipase
Probab=93.00 E-value=0.16 Score=49.49 Aligned_cols=36 Identities=28% Similarity=0.338 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHH
Q 015755 82 HEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQ 117 (401)
Q Consensus 82 ~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~ 117 (401)
+++...+..+++.....++++.|||+||.+|..+|.
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 456667778888777779999999999999998874
No 217
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.99 E-value=0.11 Score=42.28 Aligned_cols=75 Identities=17% Similarity=0.183 Sum_probs=50.2
Q ss_pred CcEEEeCCCCCChHHHHHHHHHHhhCCc-EEEEecCCCCC-ChHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHh
Q 015755 41 PPLICLPGTAGTAEVYYKQIMALSMKGY-RVISVDIPRVW-NHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQH 118 (401)
Q Consensus 41 p~vvllHG~~~~~~~~~~~~~~L~~~g~-~Vi~~D~pG~~-s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~ 118 (401)
..||++-|++...+.+..++ +. +++ -++++|+...- +++ --..+.+.||++|||-.+|-++...
T Consensus 12 ~LIvyFaGwgtpps~v~HLi--lp-eN~dl~lcYDY~dl~ldfD-----------fsAy~hirlvAwSMGVwvAeR~lqg 77 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLI--LP-ENHDLLLCYDYQDLNLDFD-----------FSAYRHIRLVAWSMGVWVAERVLQG 77 (214)
T ss_pred EEEEEEecCCCCHHHHhhcc--CC-CCCcEEEEeehhhcCcccc-----------hhhhhhhhhhhhhHHHHHHHHHHhh
Confidence 37899999999888765543 22 344 46788886431 111 0112467899999999999888776
Q ss_pred CCcccceEEEecC
Q 015755 119 RPRRVRSLVLSNT 131 (401)
Q Consensus 119 ~P~~V~~lvli~~ 131 (401)
.+ +++.+.|++
T Consensus 78 ~~--lksatAiNG 88 (214)
T COG2830 78 IR--LKSATAING 88 (214)
T ss_pred cc--ccceeeecC
Confidence 54 667777765
No 218
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=92.98 E-value=0.21 Score=43.04 Aligned_cols=53 Identities=15% Similarity=0.150 Sum_probs=38.7
Q ss_pred CcEEEEecCCCC------------------CChHHHHHHHHHHHHHhCC-ceEEEEEEchhHHHHHHHHHhC
Q 015755 67 GYRVISVDIPRV------------------WNHHEWIQAFEKFLDAIDV-HHIHLYGTSLGGFLAQLFAQHR 119 (401)
Q Consensus 67 g~~Vi~~D~pG~------------------~s~~~~a~dl~~~l~~l~~-~~v~lvGhS~Gg~ia~~~A~~~ 119 (401)
-.+|+++=+|-. ....+..+....+|++.+. +++||+|||-|+.++.++...+
T Consensus 45 ~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 45 VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 467888877632 1234555566777777754 5899999999999999998764
No 219
>PLN02324 triacylglycerol lipase
Probab=92.85 E-value=0.28 Score=46.86 Aligned_cols=36 Identities=22% Similarity=0.345 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHhCCc--eEEEEEEchhHHHHHHHHHh
Q 015755 83 EWIQAFEKFLDAIDVH--HIHLYGTSLGGFLAQLFAQH 118 (401)
Q Consensus 83 ~~a~dl~~~l~~l~~~--~v~lvGhS~Gg~ia~~~A~~ 118 (401)
++.+.|..+++..... +|++.|||+||.+|+..|..
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 4555667777766542 68999999999999988753
No 220
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=92.75 E-value=0.31 Score=45.67 Aligned_cols=41 Identities=20% Similarity=0.186 Sum_probs=31.7
Q ss_pred hCCceEEEEEEchhHHHHHHHHHhCCc-----ccceEEEecCCCCC
Q 015755 95 IDVHHIHLYGTSLGGFLAQLFAQHRPR-----RVRSLVLSNTFLDT 135 (401)
Q Consensus 95 l~~~~v~lvGhS~Gg~ia~~~A~~~P~-----~V~~lvli~~~~~~ 135 (401)
.+.+||.|||||+|+.+...+...-.+ .|+.++|++.+...
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 366799999999999998776654333 48899999876554
No 221
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=92.33 E-value=0.52 Score=45.80 Aligned_cols=103 Identities=18% Similarity=0.161 Sum_probs=63.4
Q ss_pred EEEEEcCC---CCCCcEEEeCCCCCChHHHHHHHHH----Hhh--------------CCcEEEEecCC-CCC--------
Q 015755 30 WRYYDFGP---KVVPPLICLPGTAGTAEVYYKQIMA----LSM--------------KGYRVISVDIP-RVW-------- 79 (401)
Q Consensus 30 l~y~~~G~---~~~p~vvllHG~~~~~~~~~~~~~~----L~~--------------~g~~Vi~~D~p-G~~-------- 79 (401)
++|...++ .++|.|+.+.|.+|++..|-.+... +.. ..-.++.+|+| |.|
T Consensus 88 ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e 167 (498)
T COG2939 88 FFYTFESPNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDE 167 (498)
T ss_pred EEEEecCCCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccc
Confidence 44544453 2578999999999999987554211 100 12357888865 322
Q ss_pred ---ChHHHHHHHHHHHHHh-------C--CceEEEEEEchhHHHHHHHHHhCCc---ccceEEEecCC
Q 015755 80 ---NHHEWIQAFEKFLDAI-------D--VHHIHLYGTSLGGFLAQLFAQHRPR---RVRSLVLSNTF 132 (401)
Q Consensus 80 ---s~~~~a~dl~~~l~~l-------~--~~~v~lvGhS~Gg~ia~~~A~~~P~---~V~~lvli~~~ 132 (401)
++....+|+..+++.+ . ..+.+|+|-|+||.-+..+|..--+ ..+++|++.+.
T Consensus 168 ~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssv 235 (498)
T COG2939 168 KKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSV 235 (498)
T ss_pred cccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeee
Confidence 2334445554444432 2 2489999999999998888875333 35666666554
No 222
>PLN02310 triacylglycerol lipase
Probab=92.24 E-value=0.22 Score=47.49 Aligned_cols=37 Identities=27% Similarity=0.361 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHhC----CceEEEEEEchhHHHHHHHHHh
Q 015755 82 HEWIQAFEKFLDAID----VHHIHLYGTSLGGFLAQLFAQH 118 (401)
Q Consensus 82 ~~~a~dl~~~l~~l~----~~~v~lvGhS~Gg~ia~~~A~~ 118 (401)
+++.+.|..+++.+. ..++++.|||+||.+|+.+|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 345556666766553 1379999999999999887753
No 223
>PLN02802 triacylglycerol lipase
Probab=91.99 E-value=0.24 Score=48.29 Aligned_cols=36 Identities=25% Similarity=0.373 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhCCc--eEEEEEEchhHHHHHHHHHh
Q 015755 83 EWIQAFEKFLDAIDVH--HIHLYGTSLGGFLAQLFAQH 118 (401)
Q Consensus 83 ~~a~dl~~~l~~l~~~--~v~lvGhS~Gg~ia~~~A~~ 118 (401)
++.+.|..+++....+ +|++.|||+||.+|...|..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 4555666677665432 68999999999999887764
No 224
>PLN03037 lipase class 3 family protein; Provisional
Probab=91.88 E-value=0.52 Score=46.17 Aligned_cols=37 Identities=24% Similarity=0.374 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHhCC----ceEEEEEEchhHHHHHHHHHh
Q 015755 82 HEWIQAFEKFLDAIDV----HHIHLYGTSLGGFLAQLFAQH 118 (401)
Q Consensus 82 ~~~a~dl~~~l~~l~~----~~v~lvGhS~Gg~ia~~~A~~ 118 (401)
++..++|..+++.+.. .++++.|||+||.+|+..|..
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 3455677777766542 369999999999999887753
No 225
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=91.68 E-value=0.31 Score=49.33 Aligned_cols=93 Identities=11% Similarity=0.166 Sum_probs=54.6
Q ss_pred CCcEEEeCCCCCChH---HH--HHHHHHHhhCCcEEEEecCC----CC-----------CChHHHHH---HHHHHHHHhC
Q 015755 40 VPPLICLPGTAGTAE---VY--YKQIMALSMKGYRVISVDIP----RV-----------WNHHEWIQ---AFEKFLDAID 96 (401)
Q Consensus 40 ~p~vvllHG~~~~~~---~~--~~~~~~L~~~g~~Vi~~D~p----G~-----------~s~~~~a~---dl~~~l~~l~ 96 (401)
-|++|++||.+-... .+ ......+..++.-|+.+.+| |+ ..+-++.. .+..-|..+|
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 589999999864322 22 12222333345667777775 33 22233333 3445555565
Q ss_pred C--ceEEEEEEchhHHHHHHHHHh--CCcccceEEEecCC
Q 015755 97 V--HHIHLYGTSLGGFLAQLFAQH--RPRRVRSLVLSNTF 132 (401)
Q Consensus 97 ~--~~v~lvGhS~Gg~ia~~~A~~--~P~~V~~lvli~~~ 132 (401)
. ++|.++|||.||..+..+... ....+.+.|.+++.
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 4 489999999999998766542 12456666666654
No 226
>PLN02753 triacylglycerol lipase
Probab=91.62 E-value=0.28 Score=48.04 Aligned_cols=36 Identities=28% Similarity=0.371 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHhCC-----ceEEEEEEchhHHHHHHHHH
Q 015755 82 HEWIQAFEKFLDAIDV-----HHIHLYGTSLGGFLAQLFAQ 117 (401)
Q Consensus 82 ~~~a~dl~~~l~~l~~-----~~v~lvGhS~Gg~ia~~~A~ 117 (401)
+++.+.|..+++..+. .+|++.|||+||.+|+..|.
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 3445566667766542 48999999999999998875
No 227
>PLN02719 triacylglycerol lipase
Probab=91.32 E-value=0.42 Score=46.73 Aligned_cols=35 Identities=29% Similarity=0.382 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhCC-----ceEEEEEEchhHHHHHHHHH
Q 015755 83 EWIQAFEKFLDAIDV-----HHIHLYGTSLGGFLAQLFAQ 117 (401)
Q Consensus 83 ~~a~dl~~~l~~l~~-----~~v~lvGhS~Gg~ia~~~A~ 117 (401)
++.+.|..+++.... .++++.|||+||.+|+..|.
T Consensus 278 QVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 278 QVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 445556666665542 27999999999999998775
No 228
>PLN02761 lipase class 3 family protein
Probab=90.80 E-value=0.38 Score=47.14 Aligned_cols=35 Identities=23% Similarity=0.286 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhC-----C-ceEEEEEEchhHHHHHHHHH
Q 015755 83 EWIQAFEKFLDAID-----V-HHIHLYGTSLGGFLAQLFAQ 117 (401)
Q Consensus 83 ~~a~dl~~~l~~l~-----~-~~v~lvGhS~Gg~ia~~~A~ 117 (401)
++.+.|..+++..+ . -++++.|||+||.+|...|.
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 45566666766652 1 26999999999999988775
No 229
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=90.59 E-value=18 Score=35.40 Aligned_cols=103 Identities=17% Similarity=0.274 Sum_probs=62.6
Q ss_pred EEEEEcCCCCCCcEEEeCCCCCChHHHH--HHHHHHhhCCcEEEEe-cCC---CC--CChH----HHHHHHHHHHHHhCC
Q 015755 30 WRYYDFGPKVVPPLICLPGTAGTAEVYY--KQIMALSMKGYRVISV-DIP---RV--WNHH----EWIQAFEKFLDAIDV 97 (401)
Q Consensus 30 l~y~~~G~~~~p~vvllHG~~~~~~~~~--~~~~~L~~~g~~Vi~~-D~p---G~--~s~~----~~a~dl~~~l~~l~~ 97 (401)
++|..-|+-..|..|.+-|+-. .+-|. ..+..| |...+.+ |.| |. -..+ .+.+-|.+.|+.||.
T Consensus 279 ~yYFnPGD~KPPL~VYFSGyR~-aEGFEgy~MMk~L---g~PfLL~~DpRleGGaFYlGs~eyE~~I~~~I~~~L~~LgF 354 (511)
T TIGR03712 279 IYYFNPGDFKPPLNVYFSGYRP-AEGFEGYFMMKRL---GAPFLLIGDPRLEGGAFYLGSDEYEQGIINVIQEKLDYLGF 354 (511)
T ss_pred EEecCCcCCCCCeEEeeccCcc-cCcchhHHHHHhc---CCCeEEeeccccccceeeeCcHHHHHHHHHHHHHHHHHhCC
Confidence 3444445544567789988876 44332 233444 4454444 444 21 1233 345566777788888
Q ss_pred c--eEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCChhH
Q 015755 98 H--HIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDTHSF 138 (401)
Q Consensus 98 ~--~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~~~~ 138 (401)
+ ..+|-|-|||.+-|+.++++.- -.++|+--|.......
T Consensus 355 ~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~NLGti 395 (511)
T TIGR03712 355 DHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLVNLGTI 395 (511)
T ss_pred CHHHeeeccccccchhhhhhcccCC--CceEEEcCcccchhhh
Confidence 6 6999999999999999998752 2456655555444333
No 230
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=88.81 E-value=0.75 Score=39.04 Aligned_cols=59 Identities=10% Similarity=0.206 Sum_probs=41.9
Q ss_pred CcEEEEEeCCCCCCCcHHHHHHHHHHc---CC--CeEEEecCCCCCCCcCCh---HHHHHHHHHHHhh
Q 015755 212 DSHITIMDTNDYCATSQQLKDQLSERY---SG--ARQAYMKTGGEFPFLSRP---DEVNLHLQLHLRR 271 (401)
Q Consensus 212 ~Pvlli~G~~D~~~~~~~~~~~~~~~~---~~--~~~~~i~~~GH~~~~e~p---~~v~~~i~~fl~~ 271 (401)
++.|.|-|+.|+ +............. |. ...++.+++||+-.+.-+ +++.-.|.+|+..
T Consensus 135 taLlTVEGe~DD-Isg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 135 TALLTVEGERDD-ISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred ceeEEeecCccc-CCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 456779999996 56665555444444 32 356778899998877654 6788889999875
No 231
>PLN02847 triacylglycerol lipase
Probab=88.59 E-value=0.79 Score=45.68 Aligned_cols=26 Identities=35% Similarity=0.402 Sum_probs=20.1
Q ss_pred HHhCCceEEEEEEchhHHHHHHHHHh
Q 015755 93 DAIDVHHIHLYGTSLGGFLAQLFAQH 118 (401)
Q Consensus 93 ~~l~~~~v~lvGhS~Gg~ia~~~A~~ 118 (401)
+....-+++++|||+||.+|..++..
T Consensus 246 ~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 246 DEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHCCCCeEEEeccChHHHHHHHHHHH
Confidence 33333489999999999999887764
No 232
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=88.20 E-value=0.76 Score=43.27 Aligned_cols=37 Identities=27% Similarity=0.323 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHh
Q 015755 82 HEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQH 118 (401)
Q Consensus 82 ~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~ 118 (401)
+.+.+++..+++....-++.+-|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 5677888888888886689999999999999887764
No 233
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=87.03 E-value=2 Score=40.19 Aligned_cols=58 Identities=17% Similarity=0.163 Sum_probs=43.7
Q ss_pred CcEEEEEeCCCCCCCcHHHHHHHHHHcC------------------------C-CeEEEecCCCCCCCcCChHHHHHHHH
Q 015755 212 DSHITIMDTNDYCATSQQLKDQLSERYS------------------------G-ARQAYMKTGGEFPFLSRPDEVNLHLQ 266 (401)
Q Consensus 212 ~Pvlli~G~~D~~~~~~~~~~~~~~~~~------------------------~-~~~~~i~~~GH~~~~e~p~~v~~~i~ 266 (401)
.++|+..|+.| .+++.-..+.+.+.+. + .+++.+.+|||+++ .+|+...+.+.
T Consensus 234 i~VliY~Gd~D-~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 234 YRSLIYSGDHD-IAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred ceEEEEECCcC-eeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 57999999999 5777655544444331 1 45667779999996 59999999999
Q ss_pred HHHhh
Q 015755 267 LHLRR 271 (401)
Q Consensus 267 ~fl~~ 271 (401)
.|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99975
No 234
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=86.42 E-value=0.64 Score=44.10 Aligned_cols=92 Identities=15% Similarity=0.096 Sum_probs=69.2
Q ss_pred CCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCC------------CChHHHHHHHHHHHHHhC---CceEEEE
Q 015755 39 VVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRV------------WNHHEWIQAFEKFLDAID---VHHIHLY 103 (401)
Q Consensus 39 ~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~------------~s~~~~a~dl~~~l~~l~---~~~v~lv 103 (401)
++|+|+..-|++.+..-...-...|. +-+-+.+++|-+ -++.+.|.|...+++.++ ..+.+--
T Consensus 62 drPtV~~T~GY~~~~~p~r~Ept~Ll--d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWIST 139 (448)
T PF05576_consen 62 DRPTVLYTEGYNVSTSPRRSEPTQLL--DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWIST 139 (448)
T ss_pred CCCeEEEecCcccccCccccchhHhh--ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCceec
Confidence 47999999999987543333233443 346777787755 378899999888887764 2477888
Q ss_pred EEchhHHHHHHHHHhCCcccceEEE-ecCC
Q 015755 104 GTSLGGFLAQLFAQHRPRRVRSLVL-SNTF 132 (401)
Q Consensus 104 GhS~Gg~ia~~~A~~~P~~V~~lvl-i~~~ 132 (401)
|-|-||+.++.+=.-||+.|++.|. ++|.
T Consensus 140 G~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 140 GGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred CcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 9999999999998889999999886 4553
No 235
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=82.68 E-value=3.8 Score=36.86 Aligned_cols=62 Identities=19% Similarity=0.355 Sum_probs=46.5
Q ss_pred CCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCC----------C--------------CCChHHHHHHHHHHHHH
Q 015755 39 VVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIP----------R--------------VWNHHEWIQAFEKFLDA 94 (401)
Q Consensus 39 ~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~p----------G--------------~~s~~~~a~dl~~~l~~ 94 (401)
.-|-|||.-|.++ .++.|...||.|+..||- | |++-+.+.+.+.+.++.
T Consensus 251 ~vPmi~fakG~g~-------~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~ 323 (359)
T KOG2872|consen 251 PVPMILFAKGSGG-------ALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKD 323 (359)
T ss_pred CCceEEEEcCcch-------HHHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHH
Confidence 3577888877654 356677789999999982 2 35778888899999999
Q ss_pred hCCceEEE-EEEch
Q 015755 95 IDVHHIHL-YGTSL 107 (401)
Q Consensus 95 l~~~~v~l-vGhS~ 107 (401)
+|.++.++ +||..
T Consensus 324 fG~~ryI~NLGHGi 337 (359)
T KOG2872|consen 324 FGKSRYIANLGHGI 337 (359)
T ss_pred hCccceEEecCCCC
Confidence 99766554 77763
No 236
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=82.02 E-value=4.9 Score=35.45 Aligned_cols=52 Identities=23% Similarity=0.353 Sum_probs=34.7
Q ss_pred CcEEEEecCCCC-------C------ChHHHHHHHHHHHHHh--CCceEEEEEEchhHHHHHHHHHh
Q 015755 67 GYRVISVDIPRV-------W------NHHEWIQAFEKFLDAI--DVHHIHLYGTSLGGFLAQLFAQH 118 (401)
Q Consensus 67 g~~Vi~~D~pG~-------~------s~~~~a~dl~~~l~~l--~~~~v~lvGhS~Gg~ia~~~A~~ 118 (401)
|+.+..+++|.. + +..+=++.+.+.++.. ..++++++|+|.|+.++...+.+
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHH
Confidence 567777888762 1 2333444555555441 33689999999999999887765
No 237
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=81.94 E-value=6.4 Score=34.06 Aligned_cols=68 Identities=16% Similarity=0.078 Sum_probs=50.1
Q ss_pred HHHhhCCc-EEEEecCCC--CCChHHHHHHHHHHHHHhCCceEEEEEEch----hHHHHHHHHHhCC-cccceEEEe
Q 015755 61 MALSMKGY-RVISVDIPR--VWNHHEWIQAFEKFLDAIDVHHIHLYGTSL----GGFLAQLFAQHRP-RRVRSLVLS 129 (401)
Q Consensus 61 ~~L~~~g~-~Vi~~D~pG--~~s~~~~a~dl~~~l~~l~~~~v~lvGhS~----Gg~ia~~~A~~~P-~~V~~lvli 129 (401)
..+...|. +|+..|.++ +++.+.+++.+.++++..+ ..++|+|+|. |..++.++|.+.. ..+..++-+
T Consensus 70 ~~l~~~G~d~V~~~~~~~~~~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 70 REALAMGADRAILVSDRAFAGADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred HHHHHcCCCEEEEEecccccCCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 33433565 788888875 4778999999999998877 5799999998 8899999988753 134444433
No 238
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=80.96 E-value=3.9 Score=40.66 Aligned_cols=35 Identities=26% Similarity=0.480 Sum_probs=25.1
Q ss_pred ceEEEEEEchhHHHHHHHHHh-----CCc------ccceEEEecCC
Q 015755 98 HHIHLYGTSLGGFLAQLFAQH-----RPR------RVRSLVLSNTF 132 (401)
Q Consensus 98 ~~v~lvGhS~Gg~ia~~~A~~-----~P~------~V~~lvli~~~ 132 (401)
++|+.|||||||.++=.+... .|+ ...|+|+++.+
T Consensus 526 RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 526 RPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred CceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 589999999999888655442 233 35778877765
No 239
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=80.91 E-value=2.3 Score=42.08 Aligned_cols=39 Identities=18% Similarity=0.191 Sum_probs=35.1
Q ss_pred CceEEEEEEchhHHHHHHHHHhCCcccceEEEecCCCCC
Q 015755 97 VHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNTFLDT 135 (401)
Q Consensus 97 ~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~~~~~ 135 (401)
.+.-+..|.|-||.-++..|.+||+..+|+|.-+|....
T Consensus 114 p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 114 PKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINW 152 (474)
T ss_pred CCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHH
Confidence 346789999999999999999999999999999997654
No 240
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=79.98 E-value=7.9 Score=35.63 Aligned_cols=97 Identities=19% Similarity=0.298 Sum_probs=67.0
Q ss_pred CCCcEEEeCCCCCChHH----HHHHH-----------HHHhhCCcEEEEecCC---CC--------C--ChHHHHHHHHH
Q 015755 39 VVPPLICLPGTAGTAEV----YYKQI-----------MALSMKGYRVISVDIP---RV--------W--NHHEWIQAFEK 90 (401)
Q Consensus 39 ~~p~vvllHG~~~~~~~----~~~~~-----------~~L~~~g~~Vi~~D~p---G~--------~--s~~~~a~dl~~ 90 (401)
.+|..+.+.|.++.+.. |.++- ..| +...++.+|-| || | +.++.+.|+.+
T Consensus 30 ~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWl--k~adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~ 107 (414)
T KOG1283|consen 30 ERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWL--KDADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVE 107 (414)
T ss_pred CCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhh--hhccEEEecCCCcCceeeecCcccccccHHHHHHHHHH
Confidence 45778888888876643 22221 112 24678999988 32 1 56788999999
Q ss_pred HHHHh-------CCceEEEEEEchhHHHHHHHHHhCC---------cccceEEEecCCCCChh
Q 015755 91 FLDAI-------DVHHIHLYGTSLGGFLAQLFAQHRP---------RRVRSLVLSNTFLDTHS 137 (401)
Q Consensus 91 ~l~~l-------~~~~v~lvGhS~Gg~ia~~~A~~~P---------~~V~~lvli~~~~~~~~ 137 (401)
+++.+ .-.|++|+.-|+||-+|..++...- ..+.+++|-++...+..
T Consensus 108 llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP~D 170 (414)
T KOG1283|consen 108 LLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISPED 170 (414)
T ss_pred HHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccChhH
Confidence 98765 3348999999999999988876432 24677888888776544
No 241
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=77.84 E-value=5.1 Score=36.09 Aligned_cols=42 Identities=21% Similarity=0.260 Sum_probs=28.7
Q ss_pred HHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecC
Q 015755 88 FEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNT 131 (401)
Q Consensus 88 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~ 131 (401)
+..+.+.....++.+-|||+||.+|..+..++. +-.+.+-+|
T Consensus 266 ~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 266 LGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 334444455568999999999999999888764 333444444
No 242
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=77.84 E-value=5.1 Score=36.09 Aligned_cols=42 Identities=21% Similarity=0.260 Sum_probs=28.7
Q ss_pred HHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecC
Q 015755 88 FEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNT 131 (401)
Q Consensus 88 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~ 131 (401)
+..+.+.....++.+-|||+||.+|..+..++. +-.+.+-+|
T Consensus 266 ~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 266 LGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 334444455568999999999999999888764 333444444
No 243
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=76.12 E-value=23 Score=27.34 Aligned_cols=71 Identities=14% Similarity=0.108 Sum_probs=51.2
Q ss_pred cEEEeCCCCCChHHHHHHHHHHhhC-CcEEEEecCCCCCChHHHHHHHHHHHHHhCC-ceEEEEEEchhHHHHHH
Q 015755 42 PLICLPGTAGTAEVYYKQIMALSMK-GYRVISVDIPRVWNHHEWIQAFEKFLDAIDV-HHIHLYGTSLGGFLAQL 114 (401)
Q Consensus 42 ~vvllHG~~~~~~~~~~~~~~L~~~-g~~Vi~~D~pG~~s~~~~a~dl~~~l~~l~~-~~v~lvGhS~Gg~ia~~ 114 (401)
.||.-|| .-+......+..+... -..+.++++.-..+.+++.+.+.+.++.+.. +.++++.==+||...-.
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~ggsp~n~ 74 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLYPDESIEDFEEKLEEAIEELDEGDGVLILTDLGGGSPFNE 74 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEETTTSCHHHHHHHHHHHHHHCCTTSEEEEEESSTTSHHHHH
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECcCCCCHHHHHHHHHHHHHhccCCCcEEEEeeCCCCccchH
Confidence 3788899 5555667778877755 3578889988778999999999999988864 45555554455544333
No 244
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=75.95 E-value=8.7 Score=35.89 Aligned_cols=68 Identities=18% Similarity=0.260 Sum_probs=44.5
Q ss_pred cEEEEecCC---CCC---------ChHHHHHHHHHHHHHh-------CCceEEEEEEchhHHHHHHHHHh----C-----
Q 015755 68 YRVISVDIP---RVW---------NHHEWIQAFEKFLDAI-------DVHHIHLYGTSLGGFLAQLFAQH----R----- 119 (401)
Q Consensus 68 ~~Vi~~D~p---G~~---------s~~~~a~dl~~~l~~l-------~~~~v~lvGhS~Gg~ia~~~A~~----~----- 119 (401)
.+++.+|.| |+- +-++.++|+..+|+.+ .-.+++|.|-|+||..+-.+|.. +
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 468889988 331 1123446666655542 34589999999999977666653 2
Q ss_pred -CcccceEEEecCCCCC
Q 015755 120 -PRRVRSLVLSNTFLDT 135 (401)
Q Consensus 120 -P~~V~~lvli~~~~~~ 135 (401)
+-.++|+++-++...+
T Consensus 82 ~~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 82 PPINLQGYMLGNPVTYM 98 (319)
T ss_pred CceeeeEEEeCCCCCCc
Confidence 1257889988886644
No 245
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=75.43 E-value=12 Score=35.42 Aligned_cols=82 Identities=17% Similarity=0.117 Sum_probs=59.9
Q ss_pred cEEEeCCCCCCh-------HHHHHHHHHHhhCCcEEEEecC--CCCC-ChHHHHHHHHHHHHHhCCceEEEEEEchhHHH
Q 015755 42 PLICLPGTAGTA-------EVYYKQIMALSMKGYRVISVDI--PRVW-NHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFL 111 (401)
Q Consensus 42 ~vvllHG~~~~~-------~~~~~~~~~L~~~g~~Vi~~D~--pG~~-s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~i 111 (401)
.||++||.+.|. +.|..++..+.+++ -+-.+|. -|++ .+++-+.-+..+++... -.+|..|+.=..
T Consensus 173 ~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~-lip~~D~AYQGF~~GleeDa~~lR~~a~~~~---~~lva~S~SKnf 248 (396)
T COG1448 173 SVVLLHGCCHNPTGIDPTEEQWQELADLIKERG-LIPFFDIAYQGFADGLEEDAYALRLFAEVGP---ELLVASSFSKNF 248 (396)
T ss_pred CEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC-CeeeeehhhhhhccchHHHHHHHHHHHHhCC---cEEEEehhhhhh
Confidence 699999998764 68999999888765 4455564 4553 36666666776666542 388899987666
Q ss_pred HHHHHHhCCcccceEEEecCC
Q 015755 112 AQLFAQHRPRRVRSLVLSNTF 132 (401)
Q Consensus 112 a~~~A~~~P~~V~~lvli~~~ 132 (401)
.+ |.+||-++.+++..
T Consensus 249 gL-----YgERVGa~~vva~~ 264 (396)
T COG1448 249 GL-----YGERVGALSVVAED 264 (396)
T ss_pred hh-----hhhccceeEEEeCC
Confidence 54 77999999999764
No 246
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=74.31 E-value=14 Score=29.17 Aligned_cols=58 Identities=16% Similarity=0.264 Sum_probs=37.1
Q ss_pred CCCCCcEEEeCCCCCChHHHHH--HHHHHhhCCc-------EEEEecCCCCCChHHHHHHHHHHHHH
Q 015755 37 PKVVPPLICLPGTAGTAEVYYK--QIMALSMKGY-------RVISVDIPRVWNHHEWIQAFEKFLDA 94 (401)
Q Consensus 37 ~~~~p~vvllHG~~~~~~~~~~--~~~~L~~~g~-------~Vi~~D~pG~~s~~~~a~dl~~~l~~ 94 (401)
.+++|.|+-+||+.|.++.|-. +++.|-.+|. -+...|.|-.-.++++-++|...|..
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~S~~V~~f~~~~hFP~~~~v~~Yk~~L~~~I~~ 115 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMKSPFVHQFIATHHFPHNSNVDEYKEQLKSWIRG 115 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHhcccCCCceeeecccccCCCchHHHHHHHHHHHHHHH
Confidence 4568899999999999998743 3344433322 13344555445667777777766654
No 247
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=73.87 E-value=20 Score=35.91 Aligned_cols=89 Identities=25% Similarity=0.202 Sum_probs=49.4
Q ss_pred CcEEEeCCCCC------ChHHHHH-HHHHHhhCCcEEEEecCCC---C--CC-hHHHHHHHHHHH---HHhCC--ceEEE
Q 015755 41 PPLICLPGTAG------TAEVYYK-QIMALSMKGYRVISVDIPR---V--WN-HHEWIQAFEKFL---DAIDV--HHIHL 102 (401)
Q Consensus 41 p~vvllHG~~~------~~~~~~~-~~~~L~~~g~~Vi~~D~pG---~--~s-~~~~a~dl~~~l---~~l~~--~~v~l 102 (401)
-.||-+||.|- +++.|.. +... .|+.|+.+|+-= - .. .++..-..--+| ..+|. ++|++
T Consensus 397 sli~HcHGGGfVAqsSkSHE~YLr~Wa~a---L~cPiiSVdYSLAPEaPFPRaleEv~fAYcW~inn~allG~TgEriv~ 473 (880)
T KOG4388|consen 397 SLIVHCHGGGFVAQSSKSHEPYLRSWAQA---LGCPIISVDYSLAPEAPFPRALEEVFFAYCWAINNCALLGSTGERIVL 473 (880)
T ss_pred eEEEEecCCceeeeccccccHHHHHHHHH---hCCCeEEeeeccCCCCCCCcHHHHHHHHHHHHhcCHHHhCcccceEEE
Confidence 36888999875 2233322 3333 379999999732 1 11 122111111111 22343 59999
Q ss_pred EEEchhHHHHHHHHHh----CCcccceEEEecCC
Q 015755 103 YGTSLGGFLAQLFAQH----RPRRVRSLVLSNTF 132 (401)
Q Consensus 103 vGhS~Gg~ia~~~A~~----~P~~V~~lvli~~~ 132 (401)
+|-|.||.+.+..|.+ .-..-+||++.-++
T Consensus 474 aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~p 507 (880)
T KOG4388|consen 474 AGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPP 507 (880)
T ss_pred eccCCCcceeehhHHHHHHhCCCCCCceEEecCh
Confidence 9999999975554443 32223688887653
No 248
>PRK12467 peptide synthase; Provisional
Probab=73.08 E-value=19 Score=45.78 Aligned_cols=91 Identities=22% Similarity=0.238 Sum_probs=66.2
Q ss_pred CCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCC-------CChHHHHHHHHHHHHHhCC-ceEEEEEEchhHHH
Q 015755 40 VPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRV-------WNHHEWIQAFEKFLDAIDV-HHIHLYGTSLGGFL 111 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~-------~s~~~~a~dl~~~l~~l~~-~~v~lvGhS~Gg~i 111 (401)
-+.|++.|...++...+..+...+. .+..++.+..++. .++++++....+.+..... .+..+.|+|+||.+
T Consensus 3692 ~~~l~~~h~~~r~~~~~~~l~~~l~-~~~~~~~l~~~~~~~d~~~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g~~~ 3770 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDYEPLAVILE-GDRHVLGLTCRHLLDDGWQDTSLQAMAVQYADYILWQQAKGPYGLLGWSLGGTL 3770 (3956)
T ss_pred ccceeeechhhcchhhhHHHHHHhC-CCCcEEEEeccccccccCCccchHHHHHHHHHHHHHhccCCCeeeeeeecchHH
Confidence 3569999999999888877777776 3578888877654 3566677776666655433 47899999999999
Q ss_pred HHHHHHh---CCcccceEEEecC
Q 015755 112 AQLFAQH---RPRRVRSLVLSNT 131 (401)
Q Consensus 112 a~~~A~~---~P~~V~~lvli~~ 131 (401)
+..++.. ..+.+.-+.+++.
T Consensus 3771 a~~~~~~l~~~g~~~~~~~~~~~ 3793 (3956)
T PRK12467 3771 ARLVAELLEREGESEAFLGLFDN 3793 (3956)
T ss_pred HHHHHHHHHHcCCceeEEEEEec
Confidence 9887764 4455665555543
No 249
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=71.18 E-value=24 Score=30.55 Aligned_cols=59 Identities=15% Similarity=0.190 Sum_probs=42.8
Q ss_pred CcEEEeCCCCCChHHHHHHHHHH-hhCCc-EEEEecCCCCCChHHHHHHHHHHHHHhCCceEEEE
Q 015755 41 PPLICLPGTAGTAEVYYKQIMAL-SMKGY-RVISVDIPRVWNHHEWIQAFEKFLDAIDVHHIHLY 103 (401)
Q Consensus 41 p~vvllHG~~~~~~~~~~~~~~L-~~~g~-~Vi~~D~pG~~s~~~~a~dl~~~l~~l~~~~v~lv 103 (401)
-+|++.||....+..++..++.+ .+.|| +|+..-.-||..++.+. +-++..+++.++|+
T Consensus 139 ~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP~~d~vi----~~l~~~~~~~v~L~ 199 (265)
T COG4822 139 ILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYPLVDTVI----EYLRKNGIKEVHLI 199 (265)
T ss_pred EEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCCcHHHHH----HHHHHcCCceEEEe
Confidence 47999999999988877777754 44578 77777777887766554 44556677776654
No 250
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=69.39 E-value=13 Score=36.39 Aligned_cols=51 Identities=16% Similarity=0.142 Sum_probs=36.2
Q ss_pred HHHHHHH--HHhCCceEEEEEEchhHHHHHHHHHh-----CCcccceEEEecCCCCCh
Q 015755 86 QAFEKFL--DAIDVHHIHLYGTSLGGFLAQLFAQH-----RPRRVRSLVLSNTFLDTH 136 (401)
Q Consensus 86 ~dl~~~l--~~l~~~~v~lvGhS~Gg~ia~~~A~~-----~P~~V~~lvli~~~~~~~ 136 (401)
+.+++.+ ...|.+||.|||+|+|+-+...+... .-+.|.-++|.+.+....
T Consensus 433 ~lLAe~L~~r~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k 490 (633)
T KOG2385|consen 433 ELLAEALCKRSQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTK 490 (633)
T ss_pred HHHHHHHHHhccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCC
Confidence 3344444 34678899999999999998765552 234688899998876543
No 251
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=69.03 E-value=47 Score=25.05 Aligned_cols=76 Identities=14% Similarity=0.100 Sum_probs=50.1
Q ss_pred hHHHHHHH-HHHhhCCcEEEEecCCCCCC---------h-HHHHHHHHHHHHHhCCceEEEEEEchhHH--HHHHHHHhC
Q 015755 53 AEVYYKQI-MALSMKGYRVISVDIPRVWN---------H-HEWIQAFEKFLDAIDVHHIHLYGTSLGGF--LAQLFAQHR 119 (401)
Q Consensus 53 ~~~~~~~~-~~L~~~g~~Vi~~D~pG~~s---------~-~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~--ia~~~A~~~ 119 (401)
.+...+.+ +.+...||..=.+.++.++. . +-=...+..+++.+...+++|||=|--.= +-..+|.++
T Consensus 9 Pwnly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~ 88 (100)
T PF09949_consen 9 PWNLYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRF 88 (100)
T ss_pred HHHHHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHC
Confidence 34334444 44544567666666665521 1 23355688888888888999999885543 345678899
Q ss_pred CcccceEEE
Q 015755 120 PRRVRSLVL 128 (401)
Q Consensus 120 P~~V~~lvl 128 (401)
|++|.++.+
T Consensus 89 P~~i~ai~I 97 (100)
T PF09949_consen 89 PGRILAIYI 97 (100)
T ss_pred CCCEEEEEE
Confidence 999998865
No 252
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=68.83 E-value=14 Score=34.35 Aligned_cols=62 Identities=18% Similarity=0.225 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhhCCcEEEEecCCCCCChHHHH-HHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhC
Q 015755 54 EVYYKQIMALSMKGYRVISVDIPRVWNHHEWI-QAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHR 119 (401)
Q Consensus 54 ~~~~~~~~~L~~~g~~Vi~~D~pG~~s~~~~a-~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~ 119 (401)
..|..+++.|..+. ..++++ | |....++ -=+.+.+++.++..-.++|.|+|+.++..+|..+
T Consensus 2 ~d~~rl~r~l~~~~-~gLvL~--G-GG~RG~ahiGvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 2 SDFSRLARVLTGNS-IALVLG--G-GGARGCAHIGVIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred ChHHHHHHHhcCCC-EEEEEC--C-hHHHHHHHHHHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 35677777776432 233333 3 3333332 2355566666887778999999999999999875
No 253
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=68.48 E-value=42 Score=26.20 Aligned_cols=70 Identities=16% Similarity=0.198 Sum_probs=50.4
Q ss_pred cEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCCChHHHHHHHHHHHHHhCC-ceEEEEEEchhHHHHH
Q 015755 42 PLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWNHHEWIQAFEKFLDAIDV-HHIHLYGTSLGGFLAQ 113 (401)
Q Consensus 42 ~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~s~~~~a~dl~~~l~~l~~-~~v~lvGhS~Gg~ia~ 113 (401)
.||.-|| .-+......+..+....-.+.+++++-..+.+++.+.+.++++.++. +.++++-==+||-...
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~~~i~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~viil~Dl~GGSp~n 73 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQENVEAIDFPPGESPDDLLEKIKAALAELDSGEGVLILTDLFGGSPNN 73 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhCCCCcEEEEEeCCCCCHHH
Confidence 4788898 44555667777776544588999998888999999999999998864 3455544444666543
No 254
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=67.80 E-value=42 Score=28.84 Aligned_cols=75 Identities=19% Similarity=0.265 Sum_probs=51.9
Q ss_pred HHHHHHHHHhhCCcEEEEecCCCCCC-hHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCc--ccceEEEe
Q 015755 55 VYYKQIMALSMKGYRVISVDIPRVWN-HHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPR--RVRSLVLS 129 (401)
Q Consensus 55 ~~~~~~~~L~~~g~~Vi~~D~pG~~s-~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~--~V~~lvli 129 (401)
.....+..+..+++.++.+|-+|... -.+..+.+..+++......+++|=-+..+.-.+..+..+-+ .+.++|+-
T Consensus 71 ~~~~~l~~~~~~~~D~vlIDT~Gr~~~d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~lIlT 148 (196)
T PF00448_consen 71 IAREALEKFRKKGYDLVLIDTAGRSPRDEELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGIDGLILT 148 (196)
T ss_dssp HHHHHHHHHHHTTSSEEEEEE-SSSSTHHHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSSTCEEEEE
T ss_pred HHHHHHHHHhhcCCCEEEEecCCcchhhHHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccCceEEEE
Confidence 34455666666789999999999864 45678888889988877777777666666666554444322 47888874
No 255
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=61.94 E-value=8.9 Score=35.23 Aligned_cols=30 Identities=23% Similarity=0.289 Sum_probs=24.0
Q ss_pred HHHHHHHhCCceEEEEEEchhHHHHHHHHH
Q 015755 88 FEKFLDAIDVHHIHLYGTSLGGFLAQLFAQ 117 (401)
Q Consensus 88 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~ 117 (401)
+.++++.+|+++-.++|||+|-+.|+.++.
T Consensus 72 ~~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 72 LARLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 345567789999999999999998876654
No 256
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=61.75 E-value=6 Score=36.91 Aligned_cols=30 Identities=23% Similarity=0.366 Sum_probs=24.2
Q ss_pred HHHHHHHhCCceEEEEEEchhHHHHHHHHH
Q 015755 88 FEKFLDAIDVHHIHLYGTSLGGFLAQLFAQ 117 (401)
Q Consensus 88 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~ 117 (401)
+.++++..|+++-.++|||+|=+.|+.+|.
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHTT
T ss_pred hhhhhcccccccceeeccchhhHHHHHHCC
Confidence 456667889999999999999888776553
No 257
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=61.71 E-value=11 Score=31.48 Aligned_cols=32 Identities=31% Similarity=0.256 Sum_probs=25.0
Q ss_pred HHHHHHhCCceEEEEEEchhHHHHHHHHHhCC
Q 015755 89 EKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRP 120 (401)
Q Consensus 89 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P 120 (401)
.+.+++.++..-.++|.|+|+.++..++...+
T Consensus 17 l~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 17 AKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 34444557777789999999999999998654
No 258
>PRK10279 hypothetical protein; Provisional
Probab=61.30 E-value=10 Score=35.09 Aligned_cols=32 Identities=19% Similarity=0.282 Sum_probs=25.2
Q ss_pred HHHHHHhCCceEEEEEEchhHHHHHHHHHhCC
Q 015755 89 EKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRP 120 (401)
Q Consensus 89 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P 120 (401)
.+.+++.++..-.++|.|+|+.++..||....
T Consensus 24 L~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 24 INALKKVGIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHcCCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 34455567777889999999999999997653
No 259
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=59.40 E-value=13 Score=31.72 Aligned_cols=29 Identities=28% Similarity=0.304 Sum_probs=22.7
Q ss_pred HHHHhCCceEEEEEEchhHHHHHHHHHhC
Q 015755 91 FLDAIDVHHIHLYGTSLGGFLAQLFAQHR 119 (401)
Q Consensus 91 ~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~ 119 (401)
.+++.++..-+++|.|.||.+|..++..+
T Consensus 20 ~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 20 ALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 34445666678999999999999999754
No 260
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=59.13 E-value=77 Score=28.11 Aligned_cols=75 Identities=15% Similarity=0.066 Sum_probs=45.2
Q ss_pred CCcEEEeCCCC--CChHHHHH-HHHHHhhCCcEEEEecCCCC---------------CChHHHHHH-----HHHHHHHhC
Q 015755 40 VPPLICLPGTA--GTAEVYYK-QIMALSMKGYRVISVDIPRV---------------WNHHEWIQA-----FEKFLDAID 96 (401)
Q Consensus 40 ~p~vvllHG~~--~~~~~~~~-~~~~L~~~g~~Vi~~D~pG~---------------~s~~~~a~d-----l~~~l~~l~ 96 (401)
+|.|+||+=.. .....|.. ....+...|+.|..++.+.- |+.-.+.+. +...|+..-
T Consensus 31 ~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~~ 110 (233)
T PRK05282 31 RRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRVADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREAV 110 (233)
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccchhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHHH
Confidence 57899999887 44555544 44567767999998887642 222222221 222232221
Q ss_pred CceEEEEEEchhHHHHHH
Q 015755 97 VHHIHLYGTSLGGFLAQL 114 (401)
Q Consensus 97 ~~~v~lvGhS~Gg~ia~~ 114 (401)
.+...++|.|.|+.++..
T Consensus 111 ~~G~~~~G~SAGAii~~~ 128 (233)
T PRK05282 111 KNGTPYIGWSAGANVAGP 128 (233)
T ss_pred HCCCEEEEECHHHHhhhc
Confidence 124789999999988654
No 261
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=58.86 E-value=32 Score=28.12 Aligned_cols=54 Identities=24% Similarity=0.205 Sum_probs=38.1
Q ss_pred HHHHhhCCcEEEEecCCCC-CChHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHH
Q 015755 60 IMALSMKGYRVISVDIPRV-WNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLF 115 (401)
Q Consensus 60 ~~~L~~~g~~Vi~~D~pG~-~s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~ 115 (401)
...+. +|-.|++.|.+|- .+++++|+.+..+-+ .|-+=+++||-|.|=.-++.-
T Consensus 61 l~~i~-~~~~vi~Ld~~Gk~~sSe~fA~~l~~~~~-~G~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 61 LAAIP-KGSYVVLLDIRGKALSSEEFADFLERLRD-DGRDISFLIGGADGLSEAVKA 115 (155)
T ss_pred HHhcC-CCCeEEEEecCCCcCChHHHHHHHHHHHh-cCCeEEEEEeCcccCCHHHHH
Confidence 34444 5789999999996 789999988887654 342335678999985544443
No 262
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=58.58 E-value=11 Score=34.66 Aligned_cols=31 Identities=23% Similarity=0.127 Sum_probs=24.5
Q ss_pred HHHHHHHhCCceEEEEEEchhHHHHHHHHHh
Q 015755 88 FEKFLDAIDVHHIHLYGTSLGGFLAQLFAQH 118 (401)
Q Consensus 88 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~ 118 (401)
+.++++..|+++..++|||+|=+.|+.++..
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhCC
Confidence 4455677788999999999999888876543
No 263
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=57.64 E-value=14 Score=33.60 Aligned_cols=32 Identities=25% Similarity=0.414 Sum_probs=25.1
Q ss_pred HHHHHHHhCCceEEEEEEchhHHHHHHHHHhC
Q 015755 88 FEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHR 119 (401)
Q Consensus 88 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~ 119 (401)
+.+.+++.++..-.++|.|+|+.++..+|...
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 34445566777677899999999999999764
No 264
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=56.39 E-value=16 Score=32.01 Aligned_cols=28 Identities=29% Similarity=0.386 Sum_probs=21.9
Q ss_pred HHHhCCceEEEEEEchhHHHHHHHHHhC
Q 015755 92 LDAIDVHHIHLYGTSLGGFLAQLFAQHR 119 (401)
Q Consensus 92 l~~l~~~~v~lvGhS~Gg~ia~~~A~~~ 119 (401)
+++.+++.-.++|.|.|+.++..+|..+
T Consensus 22 L~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 22 LLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 3344666667999999999999999754
No 265
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=56.10 E-value=14 Score=34.36 Aligned_cols=32 Identities=28% Similarity=0.297 Sum_probs=25.3
Q ss_pred HHHHHHhCCceEEEEEEchhHHHHHHHHHhCC
Q 015755 89 EKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRP 120 (401)
Q Consensus 89 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P 120 (401)
.+.|++.++..-++.|.|+|+.++..+|..+.
T Consensus 30 l~aL~e~gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 30 LKALEEAGIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHcCCCccEEEecCHHHHHHHHHHcCCC
Confidence 34445556788899999999999999998653
No 266
>PRK14974 cell division protein FtsY; Provisional
Probab=55.74 E-value=89 Score=29.43 Aligned_cols=66 Identities=15% Similarity=0.231 Sum_probs=47.5
Q ss_pred hhCCcEEEEecCCCCCC-hHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhCC--cccceEEEe
Q 015755 64 SMKGYRVISVDIPRVWN-HHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRP--RRVRSLVLS 129 (401)
Q Consensus 64 ~~~g~~Vi~~D~pG~~s-~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P--~~V~~lvli 129 (401)
...++.++.+|-+|... -..+.+.+..+.+......+++|.-+.-|.-+..-+..+. -.+.++|+-
T Consensus 219 ~~~~~DvVLIDTaGr~~~~~~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 219 KARGIDVVLIDTAGRMHTDANLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred HhCCCCEEEEECCCccCCcHHHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 33679999999999754 4566777788877777777788877777776666665543 257788874
No 267
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=55.32 E-value=12 Score=34.08 Aligned_cols=30 Identities=23% Similarity=0.122 Sum_probs=23.4
Q ss_pred HHHHHHhC-CceEEEEEEchhHHHHHHHHHh
Q 015755 89 EKFLDAID-VHHIHLYGTSLGGFLAQLFAQH 118 (401)
Q Consensus 89 ~~~l~~l~-~~~v~lvGhS~Gg~ia~~~A~~ 118 (401)
..+++..+ +.+..++|||+|=+.|+.++..
T Consensus 73 ~~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 73 YLKLKEQGGLKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHHHHcCCCCCCEEeecCHHHHHHHHHhCC
Confidence 44555666 8899999999999988877644
No 268
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=54.00 E-value=29 Score=28.55 Aligned_cols=44 Identities=16% Similarity=0.217 Sum_probs=31.0
Q ss_pred CCcEEEEecCCCC-CChHHHHHHHHHHHHHhCCceEEEEEEchhH
Q 015755 66 KGYRVISVDIPRV-WNHHEWIQAFEKFLDAIDVHHIHLYGTSLGG 109 (401)
Q Consensus 66 ~g~~Vi~~D~pG~-~s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg 109 (401)
.+-.++++|-.|- .+++++++.+..+...-.-+=+++||-+.|=
T Consensus 66 ~~~~~i~Ld~~Gk~~sS~~fA~~l~~~~~~g~~~i~F~IGG~~G~ 110 (155)
T PF02590_consen 66 PNDYVILLDERGKQLSSEEFAKKLERWMNQGKSDIVFIIGGADGL 110 (155)
T ss_dssp TTSEEEEE-TTSEE--HHHHHHHHHHHHHTTS-EEEEEE-BTTB-
T ss_pred CCCEEEEEcCCCccCChHHHHHHHHHHHhcCCceEEEEEecCCCC
Confidence 4678999999996 7999999999998876332446789999983
No 269
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=52.28 E-value=1.2e+02 Score=29.56 Aligned_cols=71 Identities=15% Similarity=0.182 Sum_probs=50.7
Q ss_pred HHHHHhhCCcEEEEecCCCCCCh-HHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCc--ccceEEEe
Q 015755 59 QIMALSMKGYRVISVDIPRVWNH-HEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPR--RVRSLVLS 129 (401)
Q Consensus 59 ~~~~L~~~g~~Vi~~D~pG~~s~-~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~--~V~~lvli 129 (401)
.+..+...+|.++.+|-+|.... +.+.+.+..+.+......+++|--++-|.-+...|..+-+ .+.++|+-
T Consensus 174 ~l~~~~~~~~DvViIDTaGr~~~d~~lm~El~~i~~~~~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~IlT 247 (429)
T TIGR01425 174 GVEKFKKENFDIIIVDTSGRHKQEDSLFEEMLQVAEAIQPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVIIT 247 (429)
T ss_pred HHHHHHhCCCCEEEEECCCCCcchHHHHHHHHHHhhhcCCcEEEEEeccccChhHHHHHHHHHhccCCcEEEEE
Confidence 34455546899999999997544 4567777777777766778888878777766666665533 47888873
No 270
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=52.08 E-value=31 Score=31.93 Aligned_cols=17 Identities=35% Similarity=0.479 Sum_probs=15.0
Q ss_pred EEEEEchhHHHHHHHHH
Q 015755 101 HLYGTSLGGFLAQLFAQ 117 (401)
Q Consensus 101 ~lvGhS~Gg~ia~~~A~ 117 (401)
.+.|.|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 47899999999999876
No 271
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=51.76 E-value=21 Score=29.92 Aligned_cols=29 Identities=21% Similarity=0.375 Sum_probs=22.7
Q ss_pred HHHhCCceEEEEEEchhHHHHHHHHHhCC
Q 015755 92 LDAIDVHHIHLYGTSLGGFLAQLFAQHRP 120 (401)
Q Consensus 92 l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P 120 (401)
+++.++..-.++|.|.|+.+|..++...+
T Consensus 22 L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 22 LEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 34446666678999999999999988654
No 272
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=51.68 E-value=57 Score=28.35 Aligned_cols=37 Identities=22% Similarity=0.259 Sum_probs=27.9
Q ss_pred CCcEEEeCCCCCChHH--H-HHHHHHHhhCCcEEEEecCC
Q 015755 40 VPPLICLPGTAGTAEV--Y-YKQIMALSMKGYRVISVDIP 76 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~--~-~~~~~~L~~~g~~Vi~~D~p 76 (401)
++.|.||+-.+.+... | ......|.+.|+.+..+++-
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~ 71 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLS 71 (224)
T ss_pred CceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeecc
Confidence 5789999998887764 4 33445778789999888873
No 273
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=51.62 E-value=44 Score=30.66 Aligned_cols=19 Identities=32% Similarity=0.279 Sum_probs=16.3
Q ss_pred EEEEEchhHHHHHHHHHhC
Q 015755 101 HLYGTSLGGFLAQLFAQHR 119 (401)
Q Consensus 101 ~lvGhS~Gg~ia~~~A~~~ 119 (401)
.++|.|.||.+|+.++..+
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 5789999999999998643
No 274
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=50.82 E-value=1.3e+02 Score=26.12 Aligned_cols=75 Identities=17% Similarity=0.201 Sum_probs=47.1
Q ss_pred CCCcEEEeCCCCCChHHHHH-HHHHHhhC-CcEEEEecC------------------CCCCChHHHHHHH-----HHHHH
Q 015755 39 VVPPLICLPGTAGTAEVYYK-QIMALSMK-GYRVISVDI------------------PRVWNHHEWIQAF-----EKFLD 93 (401)
Q Consensus 39 ~~p~vvllHG~~~~~~~~~~-~~~~L~~~-g~~Vi~~D~------------------pG~~s~~~~a~dl-----~~~l~ 93 (401)
.++.|++++-.......|.. ....|... |+.+..++. +| |+...+.+.+ .++++
T Consensus 30 ~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~~~~~~~~l~~ad~I~l~G-G~~~~~~~~l~~~~l~~~l~ 108 (212)
T cd03146 30 ARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFDTEDPLDALLEADVIYVGG-GNTFNLLAQWREHGLDAILK 108 (212)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccCcccHHHHHhcCCEEEECC-chHHHHHHHHHHcCHHHHHH
Confidence 35789999988886655433 44566667 888888763 23 4444333332 33343
Q ss_pred HhCCceEEEEEEchhHHHHHH
Q 015755 94 AIDVHHIHLYGTSLGGFLAQL 114 (401)
Q Consensus 94 ~l~~~~v~lvGhS~Gg~ia~~ 114 (401)
..-.+...++|.|.|+++...
T Consensus 109 ~~~~~g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 109 AALERGVVYIGWSAGSNCWFP 129 (212)
T ss_pred HHHHCCCEEEEECHhHHhhCC
Confidence 322245789999999998765
No 275
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=49.37 E-value=57 Score=31.32 Aligned_cols=91 Identities=22% Similarity=0.173 Sum_probs=62.7
Q ss_pred cEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC---------------ChHHHHHHHHHHHHHhCCceEEEEEEc
Q 015755 42 PLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW---------------NHHEWIQAFEKFLDAIDVHHIHLYGTS 106 (401)
Q Consensus 42 ~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~---------------s~~~~a~dl~~~l~~l~~~~v~lvGhS 106 (401)
.|+++--..+-.+.-....+.+..+++-|+-+|..+++ .++.+++++......-.....+|.|-.
T Consensus 50 ~villSd~~G~~d~~~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g~yr~PVl~g~g 129 (456)
T COG3946 50 LVILLSDEAGIGDQERSRADALLARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLGVYRLPVLTGPG 129 (456)
T ss_pred eeEEEEcccChhhhhcchhHHHhhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhccCcccceEeecC
Confidence 56666665555554446677777789999999998862 456666666555443333456788999
Q ss_pred hhHHHHHHHHHhCCc-ccceEEEecCC
Q 015755 107 LGGFLAQLFAQHRPR-RVRSLVLSNTF 132 (401)
Q Consensus 107 ~Gg~ia~~~A~~~P~-~V~~lvli~~~ 132 (401)
-||.++...+++-|+ .+.+.|-+++.
T Consensus 130 ~Gg~~A~asaaqSp~atlag~Vsldp~ 156 (456)
T COG3946 130 QGGTLAYASAAQSPDATLAGAVSLDPT 156 (456)
T ss_pred CCcHHHHHHHhhChhhhhcCccCCCCC
Confidence 999999999998876 35555555553
No 276
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=49.07 E-value=2.2e+02 Score=27.57 Aligned_cols=88 Identities=15% Similarity=0.158 Sum_probs=57.7
Q ss_pred cEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCC------------------C--------------ChHHHHHHHH
Q 015755 42 PLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRV------------------W--------------NHHEWIQAFE 89 (401)
Q Consensus 42 ~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~------------------~--------------s~~~~a~dl~ 89 (401)
+|+++--+-.-...+..+...+.+.|..++.+|.-=. + .++.+++-+.
T Consensus 3 tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~ 82 (403)
T PF06792_consen 3 TIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAA 82 (403)
T ss_pred EEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHH
Confidence 4444433333345666666777778999999996210 1 1223344444
Q ss_pred HHHHHh----CCceEEEEEEchhHHHHHHHHHhCCcccceEEEe
Q 015755 90 KFLDAI----DVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLS 129 (401)
Q Consensus 90 ~~l~~l----~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli 129 (401)
.++..+ .+.-|+-+|-|.|..++.......|--+-++++.
T Consensus 83 ~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVS 126 (403)
T PF06792_consen 83 RFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMVS 126 (403)
T ss_pred HHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEEE
Confidence 444443 3567888999999999999999888777777764
No 277
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=48.29 E-value=23 Score=30.86 Aligned_cols=32 Identities=28% Similarity=0.316 Sum_probs=24.7
Q ss_pred HHHHHHhCCceEEEEEEchhHHHHHHHHHhCC
Q 015755 89 EKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRP 120 (401)
Q Consensus 89 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P 120 (401)
.+.+++.++..-.++|.|.|+.+|+.+|...+
T Consensus 17 l~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 17 LKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 34444556666678999999999999998764
No 278
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=46.62 E-value=32 Score=28.70 Aligned_cols=29 Identities=24% Similarity=0.298 Sum_probs=22.1
Q ss_pred HHHHhCCceEEEEEEchhHHHHHHHHHhC
Q 015755 91 FLDAIDVHHIHLYGTSLGGFLAQLFAQHR 119 (401)
Q Consensus 91 ~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~ 119 (401)
.+++.+...-.++|.|.|+.+|..++...
T Consensus 21 ~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 21 ALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 33444556667899999999999998654
No 279
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=45.61 E-value=1.8e+02 Score=28.44 Aligned_cols=73 Identities=16% Similarity=0.203 Sum_probs=50.3
Q ss_pred HHHHHHhhCCcEEEEecCCCCCCh-HHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCc--ccceEEEec
Q 015755 58 KQIMALSMKGYRVISVDIPRVWNH-HEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPR--RVRSLVLSN 130 (401)
Q Consensus 58 ~~~~~L~~~g~~Vi~~D~pG~~s~-~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~--~V~~lvli~ 130 (401)
..+..+...+|.++.+|-+|.... +.+.+.+..+.+.+....+++|--++-|.-+...|..+-+ .+.++|+--
T Consensus 173 ~al~~~~~~~~DvVIIDTaGr~~~d~~l~~eL~~i~~~~~p~e~lLVvda~tgq~~~~~a~~f~~~v~i~giIlTK 248 (428)
T TIGR00959 173 RALEYAKENGFDVVIVDTAGRLQIDEELMEELAAIKEILNPDEILLVVDAMTGQDAVNTAKTFNERLGLTGVVLTK 248 (428)
T ss_pred HHHHHHHhcCCCEEEEeCCCccccCHHHHHHHHHHHHhhCCceEEEEEeccchHHHHHHHHHHHhhCCCCEEEEeC
Confidence 334444456899999999997544 5567777777777766777877767666666666665432 477888753
No 280
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=44.71 E-value=14 Score=35.92 Aligned_cols=37 Identities=19% Similarity=0.260 Sum_probs=27.1
Q ss_pred HHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCcccc
Q 015755 88 FEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVR 124 (401)
Q Consensus 88 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~ 124 (401)
+.+.+...++.+-++.|.|.|+.+|..++...++.+.
T Consensus 91 VLkaL~E~gl~p~vIsGTSaGAivAal~as~~~eel~ 127 (421)
T cd07230 91 VLKALFEANLLPRIISGSSAGSIVAAILCTHTDEEIP 127 (421)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHH
Confidence 3344444566677899999999999999987665543
No 281
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=44.05 E-value=2.6e+02 Score=26.01 Aligned_cols=72 Identities=14% Similarity=0.162 Sum_probs=45.5
Q ss_pred HHHHHhhCCcEEEEecCCCCCChHHHHH--------------HHHHHHHHhCCceE------EEEEEch-----------
Q 015755 59 QIMALSMKGYRVISVDIPRVWNHHEWIQ--------------AFEKFLDAIDVHHI------HLYGTSL----------- 107 (401)
Q Consensus 59 ~~~~L~~~g~~Vi~~D~pG~~s~~~~a~--------------dl~~~l~~l~~~~v------~lvGhS~----------- 107 (401)
.+..|.+.||.|+++|-.-.+..+.+.. -+.++++...++-| ..||-|+
T Consensus 16 tv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv 95 (329)
T COG1087 16 TVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNV 95 (329)
T ss_pred HHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhch
Confidence 3556666899999999876554443322 35666666666543 3467775
Q ss_pred -hHHHHHHHHHhCCcccceEEEecCC
Q 015755 108 -GGFLAQLFAQHRPRRVRSLVLSNTF 132 (401)
Q Consensus 108 -Gg~ia~~~A~~~P~~V~~lvli~~~ 132 (401)
|....+..+.++ .|+.+|+.++.
T Consensus 96 ~gTl~Ll~am~~~--gv~~~vFSStA 119 (329)
T COG1087 96 VGTLNLIEAMLQT--GVKKFIFSSTA 119 (329)
T ss_pred HhHHHHHHHHHHh--CCCEEEEecch
Confidence 333444444454 39999998874
No 282
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=43.78 E-value=58 Score=28.66 Aligned_cols=49 Identities=18% Similarity=0.301 Sum_probs=29.9
Q ss_pred HHHHHHHHHhhCCcEEEEecCCCCCChHHHHHHHHHHHHHhCCceEEEE
Q 015755 55 VYYKQIMALSMKGYRVISVDIPRVWNHHEWIQAFEKFLDAIDVHHIHLY 103 (401)
Q Consensus 55 ~~~~~~~~L~~~g~~Vi~~D~pG~~s~~~~a~dl~~~l~~l~~~~v~lv 103 (401)
..+..+..|.++||+|..+.+.-..+...+.+.|..+++..+++.++++
T Consensus 50 aMRhfa~~L~~~G~~V~Y~~~~~~~~~~s~~~~L~~~~~~~~~~~~~~~ 98 (224)
T PF04244_consen 50 AMRHFADELRAKGFRVHYIELDDPENTQSFEDALARALKQHGIDRLHVM 98 (224)
T ss_dssp HHHHHHHHHHHTT--EEEE-TT-TT--SSHHHHHHHHHHHH----EEEE
T ss_pred HHHHHHHHHHhCCCEEEEEeCCCccccccHHHHHHHHHHHcCCCEEEEE
Confidence 3466677888899999999998655555777788888888887777654
No 283
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=42.79 E-value=25 Score=35.43 Aligned_cols=32 Identities=16% Similarity=0.058 Sum_probs=25.5
Q ss_pred HHHHH-HHhCCceEEEEEEchhHHHHHHHHHhC
Q 015755 88 FEKFL-DAIDVHHIHLYGTSLGGFLAQLFAQHR 119 (401)
Q Consensus 88 l~~~l-~~l~~~~v~lvGhS~Gg~ia~~~A~~~ 119 (401)
+.+++ +.+|+++-.++|||+|=+.|+..|--.
T Consensus 254 La~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 254 LTQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 34445 578999999999999999998877544
No 284
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=42.79 E-value=59 Score=27.52 Aligned_cols=37 Identities=24% Similarity=0.258 Sum_probs=29.3
Q ss_pred CCCcEEEeCCCCCChHHH--HHHHHHHhhCCcEEEEecC
Q 015755 39 VVPPLICLPGTAGTAEVY--YKQIMALSMKGYRVISVDI 75 (401)
Q Consensus 39 ~~p~vvllHG~~~~~~~~--~~~~~~L~~~g~~Vi~~D~ 75 (401)
.++.+|.+-|+.++.++- ..+...|.++|++++..|=
T Consensus 21 ~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 21 QKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 357899999999998753 3345677778999999993
No 285
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=42.58 E-value=2.6e+02 Score=25.37 Aligned_cols=71 Identities=10% Similarity=0.051 Sum_probs=46.4
Q ss_pred HHHHHhh-CCcEEEEecCCCCCC-hHHHHHHHHHHHHHhCCceEEEE-EEchhHHHHHHHHHhC-CcccceEEEe
Q 015755 59 QIMALSM-KGYRVISVDIPRVWN-HHEWIQAFEKFLDAIDVHHIHLY-GTSLGGFLAQLFAQHR-PRRVRSLVLS 129 (401)
Q Consensus 59 ~~~~L~~-~g~~Vi~~D~pG~~s-~~~~a~dl~~~l~~l~~~~v~lv-GhS~Gg~ia~~~A~~~-P~~V~~lvli 129 (401)
.+..+.. .++.++.+|-+|... -....+.+..+++......++|| .-++++.-+...+.++ +-.+.++|+-
T Consensus 145 ~l~~l~~~~~~D~ViIDt~Gr~~~~~~~l~el~~~~~~~~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I~T 219 (270)
T PRK06731 145 ALTYFKEEARVDYILIDTAGKNYRASETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKDIHIDGIVFT 219 (270)
T ss_pred HHHHHHhcCCCCEEEEECCCCCcCCHHHHHHHHHHHhhhCCCeEEEEEcCccCHHHHHHHHHHhCCCCCCEEEEE
Confidence 3344432 369999999999753 34556666677766655556654 4467777777777765 3457777763
No 286
>PRK10867 signal recognition particle protein; Provisional
Probab=42.52 E-value=2.5e+02 Score=27.50 Aligned_cols=71 Identities=18% Similarity=0.218 Sum_probs=48.8
Q ss_pred HHHHHhhCCcEEEEecCCCCCCh-HHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCc--ccceEEEe
Q 015755 59 QIMALSMKGYRVISVDIPRVWNH-HEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPR--RVRSLVLS 129 (401)
Q Consensus 59 ~~~~L~~~g~~Vi~~D~pG~~s~-~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~--~V~~lvli 129 (401)
.+......+|.++.+|-+|.... +.+.+.+..+.+......+++|.-++-|.-+...|..+-+ .+.++|+-
T Consensus 175 a~~~a~~~~~DvVIIDTaGrl~~d~~lm~eL~~i~~~v~p~evllVlda~~gq~av~~a~~F~~~~~i~giIlT 248 (433)
T PRK10867 175 ALEEAKENGYDVVIVDTAGRLHIDEELMDELKAIKAAVNPDEILLVVDAMTGQDAVNTAKAFNEALGLTGVILT 248 (433)
T ss_pred HHHHHHhcCCCEEEEeCCCCcccCHHHHHHHHHHHHhhCCCeEEEEEecccHHHHHHHHHHHHhhCCCCEEEEe
Confidence 33344446899999999997544 5566777777776666677777777766667666665432 36788873
No 287
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=42.13 E-value=49 Score=30.09 Aligned_cols=56 Identities=16% Similarity=0.169 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHhCC---ceEEEEEEchhHHHHHHHHH---hCCcccceEEEecCCCCChhHh
Q 015755 84 WIQAFEKFLDAIDV---HHIHLYGTSLGGFLAQLFAQ---HRPRRVRSLVLSNTFLDTHSFA 139 (401)
Q Consensus 84 ~a~dl~~~l~~l~~---~~v~lvGhS~Gg~ia~~~A~---~~P~~V~~lvli~~~~~~~~~~ 139 (401)
+.+.|..-++.+.. .++++.|-|+|++-+...-. ..-+++.|.++++++.....+.
T Consensus 92 L~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~s~~w~ 153 (289)
T PF10081_consen 92 LFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFFSPLWR 153 (289)
T ss_pred HHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCCChhHH
Confidence 33444444454432 37999999999986654322 2235799999999976655443
No 288
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=41.71 E-value=82 Score=26.01 Aligned_cols=44 Identities=25% Similarity=0.276 Sum_probs=32.7
Q ss_pred CcEEEEecCCCC-CChHHHHHHHHHHHHHhCCceEEEEEEchhHH
Q 015755 67 GYRVISVDIPRV-WNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGF 110 (401)
Q Consensus 67 g~~Vi~~D~pG~-~s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ 110 (401)
+-.+|++|-.|- .+++++++.+..+...-.-+-+++||-+.|=.
T Consensus 67 ~~~~i~LDe~Gk~~sS~~fA~~l~~~~~~g~~~i~F~IGGa~G~~ 111 (157)
T PRK00103 67 GARVIALDERGKQLSSEEFAQELERWRDDGRSDVAFVIGGADGLS 111 (157)
T ss_pred CCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCccEEEEEcCccccC
Confidence 457999999996 79999999998874432224466889888743
No 289
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=41.32 E-value=59 Score=20.43 Aligned_cols=29 Identities=21% Similarity=0.350 Sum_probs=22.5
Q ss_pred CCcEEEEecCCCCC----ChHHHHHHHHHHHHH
Q 015755 66 KGYRVISVDIPRVW----NHHEWIQAFEKFLDA 94 (401)
Q Consensus 66 ~g~~Vi~~D~pG~~----s~~~~a~dl~~~l~~ 94 (401)
.+|.+.++|+||.. +.++..+.+.+.+..
T Consensus 12 ~~y~~~~pdlpg~~t~G~t~eea~~~~~eal~~ 44 (48)
T PF03681_consen 12 GGYVAYFPDLPGCFTQGDTLEEALENAKEALEL 44 (48)
T ss_dssp SSEEEEETTCCTCEEEESSHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCccChhhcCCCHHHHHHHHHHHHHH
Confidence 57999999999973 677777777776653
No 290
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=41.16 E-value=16 Score=35.01 Aligned_cols=40 Identities=20% Similarity=0.208 Sum_probs=29.8
Q ss_pred HHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEE
Q 015755 88 FEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLV 127 (401)
Q Consensus 88 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lv 127 (401)
+.+.+...|+.+-++.|.|.|+.+|..+|..-++.+..++
T Consensus 101 v~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l 140 (391)
T cd07229 101 VVKALWLRGLLPRIITGTATGALIAALVGVHTDEELLRFL 140 (391)
T ss_pred HHHHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHHH
Confidence 3444555677778899999999999999996655554443
No 291
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=41.13 E-value=1.6e+02 Score=29.19 Aligned_cols=86 Identities=17% Similarity=0.232 Sum_probs=59.2
Q ss_pred EEeCCCCCChHHHH-HHHHHHhhCCcEEEEecCCCC-CChHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHh---
Q 015755 44 ICLPGTAGTAEVYY-KQIMALSMKGYRVISVDIPRV-WNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQH--- 118 (401)
Q Consensus 44 vllHG~~~~~~~~~-~~~~~L~~~g~~Vi~~D~pG~-~s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~--- 118 (401)
+|=-|+|.+...-. ..+.+-..+||.|+.+|--|. .+-+.+...+..+++.-..+.|+.||--+=|.=++.-+.+
T Consensus 442 lfekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~~~~~lm~~l~k~~~~~~pd~i~~vgealvg~dsv~q~~~fn~ 521 (587)
T KOG0781|consen 442 LFEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMHNNAPLMTSLAKLIKVNKPDLILFVGEALVGNDSVDQLKKFNR 521 (587)
T ss_pred HHhhhcCCChHHHHHHHHHHHHhcCCCEEEEeccccccCChhHHHHHHHHHhcCCCceEEEehhhhhCcHHHHHHHHHHH
Confidence 44556676655333 334444557999999999885 3556777888888888888899999988877766544332
Q ss_pred ------CCcccceEEEe
Q 015755 119 ------RPRRVRSLVLS 129 (401)
Q Consensus 119 ------~P~~V~~lvli 129 (401)
.|..++++++.
T Consensus 522 al~~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 522 ALADHSTPRLIDGILLT 538 (587)
T ss_pred HHhcCCCccccceEEEE
Confidence 24567777764
No 292
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=40.80 E-value=1.3e+02 Score=29.21 Aligned_cols=73 Identities=16% Similarity=0.186 Sum_probs=57.8
Q ss_pred HHHHHHHhhCCcEEEEecCCCCCCh-HHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCcc--cceEEEe
Q 015755 57 YKQIMALSMKGYRVISVDIPRVWNH-HEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRR--VRSLVLS 129 (401)
Q Consensus 57 ~~~~~~L~~~g~~Vi~~D~pG~~s~-~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~--V~~lvli 129 (401)
..-+..+...+|.|+.+|--|--.+ +++.+.+.++-+.+....+.+|--+|=|.-|...|..+-+. +.|+|+-
T Consensus 172 k~al~~ak~~~~DvvIvDTAGRl~ide~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlT 247 (451)
T COG0541 172 KAALEKAKEEGYDVVIVDTAGRLHIDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVILT 247 (451)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccccHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEEEE
Confidence 3334455556789999999886655 46778888888888888999999999999999999887654 6788884
No 293
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=39.88 E-value=1.6e+02 Score=28.46 Aligned_cols=64 Identities=14% Similarity=0.234 Sum_probs=38.6
Q ss_pred CcEEEeCCCCC---ChHHHHHHHHHHhhCCcEEEEecCCCC--------C---ChHHHHHHHHHHHHH--hCCceEEEEE
Q 015755 41 PPLICLPGTAG---TAEVYYKQIMALSMKGYRVISVDIPRV--------W---NHHEWIQAFEKFLDA--IDVHHIHLYG 104 (401)
Q Consensus 41 p~vvllHG~~~---~~~~~~~~~~~L~~~g~~Vi~~D~pG~--------~---s~~~~a~dl~~~l~~--l~~~~v~lvG 104 (401)
.+||+++.+.. .+......+..|.+.|+.|+-++ +|+ | +.+++++.+...+.. +..+++.+-|
T Consensus 117 ~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g~gr~~~~~~I~~~~~~~~~~~~l~gk~vlITg 195 (399)
T PRK05579 117 APVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVGPGRMAEPEEIVAAAERALSPKDLAGKRVLITA 195 (399)
T ss_pred CCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcCCCCCCCHHHHHHHHHHHhhhcccCCCEEEEeC
Confidence 46777774432 22234566778887888887554 443 2 456777777666643 3344666666
Q ss_pred E
Q 015755 105 T 105 (401)
Q Consensus 105 h 105 (401)
-
T Consensus 196 G 196 (399)
T PRK05579 196 G 196 (399)
T ss_pred C
Confidence 5
No 294
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=39.19 E-value=3.3e+02 Score=25.52 Aligned_cols=86 Identities=19% Similarity=0.191 Sum_probs=47.9
Q ss_pred CcEEEeCCCCCCh-----HHHHHHHHHHhh-CCcEEEEecCCCCCCh--H-----------------------H-HHHHH
Q 015755 41 PPLICLPGTAGTA-----EVYYKQIMALSM-KGYRVISVDIPRVWNH--H-----------------------E-WIQAF 88 (401)
Q Consensus 41 p~vvllHG~~~~~-----~~~~~~~~~L~~-~g~~Vi~~D~pG~~s~--~-----------------------~-~a~dl 88 (401)
..|+|+-|-...- ..--.+...|.. ++.+++++=-+|.|+. + . +.+..
T Consensus 32 ~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~AY 111 (423)
T COG3673 32 RLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREAY 111 (423)
T ss_pred eEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHHH
Confidence 3566666643211 122334445553 4677777777776532 1 1 11122
Q ss_pred HHHHHHhCC-ceEEEEEEchhHHHHHHHHHhCCcccceEEEec
Q 015755 89 EKFLDAIDV-HHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSN 130 (401)
Q Consensus 89 ~~~l~~l~~-~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~ 130 (401)
.-+++++.. ++|+++|+|-|+++|--+|.. ++.+=|++
T Consensus 112 rFL~~~yepGD~Iy~FGFSRGAf~aRVlagm----ir~vGlls 150 (423)
T COG3673 112 RFLIFNYEPGDEIYAFGFSRGAFSARVLAGM----IRHVGLLS 150 (423)
T ss_pred HHHHHhcCCCCeEEEeeccchhHHHHHHHHH----HHHhhhhc
Confidence 233344432 589999999999999888764 44444444
No 295
>PRK02399 hypothetical protein; Provisional
Probab=39.19 E-value=3.7e+02 Score=26.05 Aligned_cols=86 Identities=24% Similarity=0.214 Sum_probs=54.4
Q ss_pred EEeCCCCCCh-HHHHHHHHHHhhCCcEEEEecCC--C---C-------------C-C-------------hHHHHHHHHH
Q 015755 44 ICLPGTAGTA-EVYYKQIMALSMKGYRVISVDIP--R---V-------------W-N-------------HHEWIQAFEK 90 (401)
Q Consensus 44 vllHG~~~~~-~~~~~~~~~L~~~g~~Vi~~D~p--G---~-------------~-s-------------~~~~a~dl~~ 90 (401)
|++=|-..+. +.+..+...+.+.|..|+.+|.- | + + + ++.+++-...
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 3333444444 45555556666668999999972 1 1 0 1 1223333444
Q ss_pred HHHH----hCCceEEEEEEchhHHHHHHHHHhCCcccceEEEe
Q 015755 91 FLDA----IDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLS 129 (401)
Q Consensus 91 ~l~~----l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli 129 (401)
+++. -.+.-++-+|-|.|..++.......|--+-++++.
T Consensus 86 ~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmVS 128 (406)
T PRK02399 86 FVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMVS 128 (406)
T ss_pred HHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEEE
Confidence 4443 24567889999999999999999888777776654
No 296
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=38.16 E-value=43 Score=30.20 Aligned_cols=30 Identities=13% Similarity=0.140 Sum_probs=22.5
Q ss_pred HHHhCCc-eEEEEEEchhHHHHHHHHHhCCc
Q 015755 92 LDAIDVH-HIHLYGTSLGGFLAQLFAQHRPR 121 (401)
Q Consensus 92 l~~l~~~-~v~lvGhS~Gg~ia~~~A~~~P~ 121 (401)
+.+.++. --.++|.|.|+.++..++...+.
T Consensus 20 l~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 20 FLEAGIRPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHcCCCCCCEEEEECHHHHhHHHHHhCCcc
Confidence 3344555 44789999999999999987654
No 297
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=37.62 E-value=1.4e+02 Score=22.68 Aligned_cols=78 Identities=15% Similarity=0.146 Sum_probs=47.8
Q ss_pred CCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCCChHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhC
Q 015755 40 VPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHR 119 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~ 119 (401)
.|.|+|.--++.-...-..++..+. -.+.|+-+|...++. ++.+.+..+-..-.+..+++=|...||.--+......
T Consensus 14 ~~VVifSKs~C~~c~~~k~ll~~~~-v~~~vvELD~~~~g~--eiq~~l~~~tg~~tvP~vFI~Gk~iGG~~dl~~lh~~ 90 (104)
T KOG1752|consen 14 NPVVIFSKSSCPYCHRAKELLSDLG-VNPKVVELDEDEDGS--EIQKALKKLTGQRTVPNVFIGGKFIGGASDLMALHKS 90 (104)
T ss_pred CCEEEEECCcCchHHHHHHHHHhCC-CCCEEEEccCCCCcH--HHHHHHHHhcCCCCCCEEEECCEEEcCHHHHHHHHHc
Confidence 5677777755554444444444433 357888888876655 4444444433233455788889999998766655544
Q ss_pred C
Q 015755 120 P 120 (401)
Q Consensus 120 P 120 (401)
.
T Consensus 91 G 91 (104)
T KOG1752|consen 91 G 91 (104)
T ss_pred C
Confidence 3
No 298
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=37.58 E-value=43 Score=30.38 Aligned_cols=33 Identities=21% Similarity=0.375 Sum_probs=27.4
Q ss_pred cEEEeCCCCCChHHHHHHHHHHhhCCcEEEEec
Q 015755 42 PLICLPGTAGTAEVYYKQIMALSMKGYRVISVD 74 (401)
Q Consensus 42 ~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D 74 (401)
.||++|....+......++..|.++||+++.++
T Consensus 232 ~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 232 AMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred cEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 688999877777777888889988999988774
No 299
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=37.38 E-value=32 Score=29.19 Aligned_cols=33 Identities=24% Similarity=0.382 Sum_probs=23.6
Q ss_pred cEEEeCCC---CCChHHHHHHHHHHhhCCcEEEEec
Q 015755 42 PLICLPGT---AGTAEVYYKQIMALSMKGYRVISVD 74 (401)
Q Consensus 42 ~vvllHG~---~~~~~~~~~~~~~L~~~g~~Vi~~D 74 (401)
.||++|.. ..+......+++.|.++||+++.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 58999942 2334566777888888899988764
No 300
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=37.17 E-value=1.5e+02 Score=27.87 Aligned_cols=32 Identities=13% Similarity=0.099 Sum_probs=20.8
Q ss_pred ChHHHHHHHHHHHHHhC-CceEEEEEEchhHHH
Q 015755 80 NHHEWIQAFEKFLDAID-VHHIHLYGTSLGGFL 111 (401)
Q Consensus 80 s~~~~a~dl~~~l~~l~-~~~v~lvGhS~Gg~i 111 (401)
+..+.++.+...++... ..+++||=|++=|..
T Consensus 118 ~~~~~~~~i~~~l~~~~~~~~l~lvIHnIDg~~ 150 (326)
T PF04084_consen 118 SPSEQLDFIISYLESRPSPPPLYLVIHNIDGPS 150 (326)
T ss_pred CHHHHHHHHHHHHhccCCCCceEEEEECCCChh
Confidence 34455555555555554 458899999987765
No 301
>PRK00771 signal recognition particle protein Srp54; Provisional
Probab=37.01 E-value=3.9e+02 Score=26.30 Aligned_cols=89 Identities=18% Similarity=0.176 Sum_probs=51.2
Q ss_pred CCcEEEeCCCCCChHH--HHHHHHHHhhCCcEEEEecCCCCCChHHHHHHHHHHHHHhCCceEEEEEEchh---HHHHHH
Q 015755 40 VPPLICLPGTAGTAEV--YYKQIMALSMKGYRVISVDIPRVWNHHEWIQAFEKFLDAIDVHHIHLYGTSLG---GFLAQL 114 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~--~~~~~~~L~~~g~~Vi~~D~pG~~s~~~~a~dl~~~l~~l~~~~v~lvGhS~G---g~ia~~ 114 (401)
.|.++++-|..|++.+ ...++..|..+|++|..++.--+ .. ...+.+..+.+.+++. +++.+.+ ..++..
T Consensus 94 ~p~vI~lvG~~GsGKTTtaakLA~~L~~~g~kV~lV~~D~~-R~-aa~eQL~~la~~~gvp---~~~~~~~~d~~~i~~~ 168 (437)
T PRK00771 94 KPQTIMLVGLQGSGKTTTAAKLARYFKKKGLKVGLVAADTY-RP-AAYDQLKQLAEKIGVP---FYGDPDNKDAVEIAKE 168 (437)
T ss_pred CCeEEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEecCCCC-CH-HHHHHHHHHHHHcCCc---EEecCCccCHHHHHHH
Confidence 5778888899988874 45667778777899888886433 22 2344455566666643 2333222 222222
Q ss_pred HHHhCCcccceEEEecCCCCC
Q 015755 115 FAQHRPRRVRSLVLSNTFLDT 135 (401)
Q Consensus 115 ~A~~~P~~V~~lvli~~~~~~ 135 (401)
......+ . -+|++++....
T Consensus 169 al~~~~~-~-DvVIIDTAGr~ 187 (437)
T PRK00771 169 GLEKFKK-A-DVIIVDTAGRH 187 (437)
T ss_pred HHHHhhc-C-CEEEEECCCcc
Confidence 2222222 2 67888886543
No 302
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=36.92 E-value=47 Score=29.40 Aligned_cols=31 Identities=26% Similarity=0.173 Sum_probs=22.7
Q ss_pred HHHHHhCCc--eEEEEEEchhHHHHHHHHHhCC
Q 015755 90 KFLDAIDVH--HIHLYGTSLGGFLAQLFAQHRP 120 (401)
Q Consensus 90 ~~l~~l~~~--~v~lvGhS~Gg~ia~~~A~~~P 120 (401)
+.+.+.++. ...++|.|.|+.++..++...+
T Consensus 19 ~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 19 SLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 334444554 3479999999999999998753
No 303
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=36.87 E-value=2.3e+02 Score=25.38 Aligned_cols=75 Identities=19% Similarity=0.098 Sum_probs=0.0
Q ss_pred CCCCcEEEeCCCCCCh-HHHHHHHHHHhhCCc-EEEEecCCCC----------------------CChHHHHHHH-----
Q 015755 38 KVVPPLICLPGTAGTA-EVYYKQIMALSMKGY-RVISVDIPRV----------------------WNHHEWIQAF----- 88 (401)
Q Consensus 38 ~~~p~vvllHG~~~~~-~~~~~~~~~L~~~g~-~Vi~~D~pG~----------------------~s~~~~a~dl----- 88 (401)
+..|.|++++-.+... ..+......|.+.|+ .|-.++.+.- |+.-.+.+.+
T Consensus 26 ~~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~~r~~a~~~~~~~~l~~ad~I~~~GGnq~~l~~~l~~t~l 105 (250)
T TIGR02069 26 GEDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVREREDASDENAIALLSNATGIFFTGGDQLRITSLLGDTPL 105 (250)
T ss_pred CCCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecCChHHccCHHHHHHHhhCCEEEEeCCCHHHHHHHHcCCcH
Q ss_pred HHHHHHhCCceEEEEEEchhHHHH
Q 015755 89 EKFLDAIDVHHIHLYGTSLGGFLA 112 (401)
Q Consensus 89 ~~~l~~l~~~~v~lvGhS~Gg~ia 112 (401)
.+.|+..-.+-.+++|.|.|+++.
T Consensus 106 ~~~l~~~~~~G~vi~G~SAGA~i~ 129 (250)
T TIGR02069 106 LDRLRKRVHEGIILGGTSAGAAVM 129 (250)
T ss_pred HHHHHHHHHcCCeEEEccHHHHhc
No 304
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=36.70 E-value=46 Score=32.30 Aligned_cols=39 Identities=26% Similarity=0.285 Sum_probs=28.4
Q ss_pred HHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCcccceE
Q 015755 88 FEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSL 126 (401)
Q Consensus 88 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~l 126 (401)
+.+.+.+.++.+-+++|.|.|+.+|..+|...++.+..+
T Consensus 85 VlkaL~e~gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 85 VVKALLDADLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHHHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 333444446777789999999999999998766555444
No 305
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=36.65 E-value=83 Score=31.26 Aligned_cols=59 Identities=15% Similarity=-0.028 Sum_probs=40.5
Q ss_pred CcEEEEEeCCCCCCCcHHHHH----HHHHHcCC--------CeEEEecCCCCCCCcC--ChHHHHHHHHHHHhh
Q 015755 212 DSHITIMDTNDYCATSQQLKD----QLSERYSG--------ARQAYMKTGGEFPFLS--RPDEVNLHLQLHLRR 271 (401)
Q Consensus 212 ~Pvlli~G~~D~~~~~~~~~~----~~~~~~~~--------~~~~~i~~~GH~~~~e--~p~~v~~~i~~fl~~ 271 (401)
-..|+.||-.| .++++.... ++.+.+.+ .++..+||.+|+.--. .+-.+..+|.+|+++
T Consensus 354 GKLI~~HG~aD-~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 354 GKLILYHGWAD-PLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred CeEEEEecCCC-CccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 35889999999 466654333 33333322 4788999999976543 445678889999985
No 306
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=35.28 E-value=1.5e+02 Score=23.60 Aligned_cols=10 Identities=20% Similarity=0.082 Sum_probs=8.0
Q ss_pred cEEEeCCCCC
Q 015755 42 PLICLPGTAG 51 (401)
Q Consensus 42 ~vvllHG~~~ 51 (401)
++||+||..-
T Consensus 59 ~viFvHGCFW 68 (150)
T COG3727 59 CVIFVHGCFW 68 (150)
T ss_pred EEEEEeeeec
Confidence 6899999753
No 307
>COG3933 Transcriptional antiterminator [Transcription]
Probab=35.21 E-value=2.3e+02 Score=27.68 Aligned_cols=73 Identities=15% Similarity=0.158 Sum_probs=59.1
Q ss_pred CCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCCChHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHH
Q 015755 40 VPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQL 114 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~ 114 (401)
-..||+-||....+.. ...+..|... =-++++|+|=--+..+..+.+.+.+++....+=.++=..||......
T Consensus 109 v~vIiiAHG~sTASSm-aevanrLL~~-~~~~aiDMPLdvsp~~vle~l~e~~k~~~~~~GlllLVDMGSL~~f~ 181 (470)
T COG3933 109 VKVIIIAHGYSTASSM-AEVANRLLGE-EIFIAIDMPLDVSPSDVLEKLKEYLKERDYRSGLLLLVDMGSLTSFG 181 (470)
T ss_pred eeEEEEecCcchHHHH-HHHHHHHhhc-cceeeecCCCcCCHHHHHHHHHHHHHhcCccCceEEEEecchHHHHH
Confidence 3489999999876654 5778877754 47899999988899999999999999988777667778899876654
No 308
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=34.87 E-value=82 Score=25.87 Aligned_cols=51 Identities=24% Similarity=0.367 Sum_probs=36.3
Q ss_pred HHHHHHhhCCcEEEEecCCCC-CChHHHHHHHHHHHHHhCCceEEEEEEchhHHH
Q 015755 58 KQIMALSMKGYRVISVDIPRV-WNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFL 111 (401)
Q Consensus 58 ~~~~~L~~~g~~Vi~~D~pG~-~s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~i 111 (401)
.++..+. . -.||++|-+|- .+++++++.+..+... +.+-+++||-+.|=.-
T Consensus 58 ~il~~~~-~-~~~i~LDe~Gk~~sS~~fA~~l~~~~~~-g~~i~FvIGGa~G~~~ 109 (153)
T TIGR00246 58 RILAAIG-K-AHVVTLDIPGKPWTTPQLADTLEKWKTD-GRDVTLLIGGPEGLSP 109 (153)
T ss_pred HHHHhCC-C-CeEEEEcCCCCcCCHHHHHHHHHHHhcc-CCeEEEEEcCCCcCCH
Confidence 3444454 3 57999999996 7999999999887543 3344667898888443
No 309
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=34.72 E-value=1.1e+02 Score=25.48 Aligned_cols=60 Identities=15% Similarity=0.096 Sum_probs=39.4
Q ss_pred CCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCCChHHHHHHHHHHHHHhCC
Q 015755 38 KVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWNHHEWIQAFEKFLDAIDV 97 (401)
Q Consensus 38 ~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~s~~~~a~dl~~~l~~l~~ 97 (401)
...+.|+++-|-|.|...=.-.+++|..+|+.|.++=+............-.+.++..+.
T Consensus 23 ~~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~g~ 82 (169)
T PF03853_consen 23 PKGPRVLILCGPGNNGGDGLVAARHLANRGYNVTVYLVGPPEKLSEDAKQQLEILKKMGI 82 (169)
T ss_dssp CTT-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEEEEEESSSSTSHHHHHHHHHHHHTT-
T ss_pred cCCCeEEEEECCCCChHHHHHHHHHHHHCCCeEEEEEEeccccCCHHHHHHHHHHHhcCC
Confidence 346789999999988888778889998899998884332222444445555555666553
No 310
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=34.46 E-value=48 Score=30.82 Aligned_cols=36 Identities=14% Similarity=0.226 Sum_probs=26.1
Q ss_pred HHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCccc
Q 015755 88 FEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRV 123 (401)
Q Consensus 88 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V 123 (401)
+.+.+...++.+-++.|.|.|+.+|..++...++.+
T Consensus 86 VlkaL~e~gl~p~~i~GsSaGAivaa~~~~~t~~El 121 (323)
T cd07231 86 VVRTLVEHQLLPRVIAGSSVGSIVCAIIATRTDEEL 121 (323)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 334444457777789999999999999987644433
No 311
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=34.30 E-value=62 Score=30.11 Aligned_cols=19 Identities=37% Similarity=0.543 Sum_probs=16.1
Q ss_pred EEEEEchhHHHHHHHHHhC
Q 015755 101 HLYGTSLGGFLAQLFAQHR 119 (401)
Q Consensus 101 ~lvGhS~Gg~ia~~~A~~~ 119 (401)
.+.|.|+||.+|+.+|..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 4789999999999998643
No 312
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=34.24 E-value=51 Score=28.92 Aligned_cols=33 Identities=30% Similarity=0.399 Sum_probs=25.9
Q ss_pred cEEEeCCC-CCChHHHHHHHHHHhhCCcEEEEec
Q 015755 42 PLICLPGT-AGTAEVYYKQIMALSMKGYRVISVD 74 (401)
Q Consensus 42 ~vvllHG~-~~~~~~~~~~~~~L~~~g~~Vi~~D 74 (401)
.||++|.. ..+.+....++..|.++||+++.++
T Consensus 188 ~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 188 AILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred cEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 68999975 4455677788899988999988775
No 313
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=34.09 E-value=1.6e+02 Score=26.89 Aligned_cols=64 Identities=16% Similarity=0.192 Sum_probs=45.8
Q ss_pred CcEEEEecCCCCCChHHHHHHHHHHHHHhCCc---eEEEEEEchhHHHHHHHHHhCCcccceEEEecC
Q 015755 67 GYRVISVDIPRVWNHHEWIQAFEKFLDAIDVH---HIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNT 131 (401)
Q Consensus 67 g~~Vi~~D~pG~~s~~~~a~dl~~~l~~l~~~---~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~ 131 (401)
.|.|-.++-+.-.--+....-+..+++.++++ ++-=||.++|+.. ..+|.++...|.|+.+...
T Consensus 40 ~Yscayf~~~~~tL~eAQ~~k~~~~~~kl~L~~G~~lLDiGCGWG~l~-~~aA~~y~v~V~GvTlS~~ 106 (283)
T COG2230 40 TYSCAYFEDPDMTLEEAQRAKLDLILEKLGLKPGMTLLDIGCGWGGLA-IYAAEEYGVTVVGVTLSEE 106 (283)
T ss_pred ceeeEEeCCCCCChHHHHHHHHHHHHHhcCCCCCCEEEEeCCChhHHH-HHHHHHcCCEEEEeeCCHH
Confidence 58888888776544456666778888888876 3444999999974 5567777677777776543
No 314
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=34.05 E-value=2.8e+02 Score=25.73 Aligned_cols=70 Identities=21% Similarity=0.188 Sum_probs=49.3
Q ss_pred CCcEEEeCCCCCChHH--HHHHHHHHhhCCcE--EEEecCCCC---------------------------------CChH
Q 015755 40 VPPLICLPGTAGTAEV--YYKQIMALSMKGYR--VISVDIPRV---------------------------------WNHH 82 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~--~~~~~~~L~~~g~~--Vi~~D~pG~---------------------------------~s~~ 82 (401)
++.+|=+-|.++..++ -..+...|..+|.+ |+++|.--- |.+.
T Consensus 50 ~a~viGITG~PGaGKSTli~~L~~~l~~~G~rVaVlAVDPSSp~TGGsiLGDRiRM~~~~~~~~vFiRs~~srG~lGGlS 129 (323)
T COG1703 50 NAHVIGITGVPGAGKSTLIEALGRELRERGHRVAVLAVDPSSPFTGGSILGDRIRMQRLAVDPGVFIRSSPSRGTLGGLS 129 (323)
T ss_pred CCcEEEecCCCCCchHHHHHHHHHHHHHCCcEEEEEEECCCCCCCCccccccHhhHHhhccCCCeEEeecCCCccchhhh
Confidence 4678999999887763 35667777777764 789996210 3456
Q ss_pred HHHHHHHHHHHHhCCceEEE--EEEchhH
Q 015755 83 EWIQAFEKFLDAIDVHHIHL--YGTSLGG 109 (401)
Q Consensus 83 ~~a~dl~~~l~~l~~~~v~l--vGhS~Gg 109 (401)
.-..++..+++..|.+.|++ +|...+=
T Consensus 130 ~at~~~i~~ldAaG~DvIIVETVGvGQse 158 (323)
T COG1703 130 RATREAIKLLDAAGYDVIIVETVGVGQSE 158 (323)
T ss_pred HHHHHHHHHHHhcCCCEEEEEecCCCcch
Confidence 66778888999999887776 4444443
No 315
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=32.51 E-value=1.9e+02 Score=23.84 Aligned_cols=58 Identities=21% Similarity=0.204 Sum_probs=41.8
Q ss_pred HHHhhCCc-EEEEecCCC--CCChHHHHHHHHHHHHHhCCceEEEEEEc-hhHHHHHHHHHhC
Q 015755 61 MALSMKGY-RVISVDIPR--VWNHHEWIQAFEKFLDAIDVHHIHLYGTS-LGGFLAQLFAQHR 119 (401)
Q Consensus 61 ~~L~~~g~-~Vi~~D~pG--~~s~~~~a~dl~~~l~~l~~~~v~lvGhS-~Gg~ia~~~A~~~ 119 (401)
..+...|. +|+.++-+. .++.+.+++.+.++++..+. .++|+|+| .|..++.++|.+.
T Consensus 45 ~~~~~~Gad~v~~~~~~~~~~~~~~~~a~al~~~i~~~~p-~~Vl~~~t~~g~~la~rlAa~L 106 (168)
T cd01715 45 AALKAYGADKVLVAEDPALAHYLAEPYAPALVALAKKEKP-SHILAGATSFGKDLAPRVAAKL 106 (168)
T ss_pred HHHHhcCCCEEEEecChhhcccChHHHHHHHHHHHHhcCC-CEEEECCCccccchHHHHHHHh
Confidence 33333455 688888764 46789999999999988774 56666665 6777888888775
No 316
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=31.78 E-value=68 Score=28.59 Aligned_cols=20 Identities=20% Similarity=0.282 Sum_probs=17.8
Q ss_pred EEEEEchhHHHHHHHHHhCC
Q 015755 101 HLYGTSLGGFLAQLFAQHRP 120 (401)
Q Consensus 101 ~lvGhS~Gg~ia~~~A~~~P 120 (401)
.++|.|.|+.++..+|...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 78999999999999998753
No 317
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=31.73 E-value=2.1e+02 Score=26.49 Aligned_cols=64 Identities=13% Similarity=0.192 Sum_probs=42.7
Q ss_pred CcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecC----CCC----------------------------CChHHHHHHH
Q 015755 41 PPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDI----PRV----------------------------WNHHEWIQAF 88 (401)
Q Consensus 41 p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~----pG~----------------------------~s~~~~a~dl 88 (401)
++||+|-|-.+++.+ .++-.|++++..+|..|- +|. ++..++.++.
T Consensus 4 ~~ii~I~GpTasGKS--~LAl~LA~~~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f~~~a 81 (300)
T PRK14729 4 NKIVFIFGPTAVGKS--NILFHFPKGKAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIFYKEA 81 (300)
T ss_pred CcEEEEECCCccCHH--HHHHHHHHhCCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHHHHHH
Confidence 458899999998886 445556555558999994 331 4677888888
Q ss_pred HHHHHHhC--CceEEEEEEc
Q 015755 89 EKFLDAID--VHHIHLYGTS 106 (401)
Q Consensus 89 ~~~l~~l~--~~~v~lvGhS 106 (401)
...++.+. .+..+++|-+
T Consensus 82 ~~~i~~i~~~gk~PilvGGT 101 (300)
T PRK14729 82 LKIIKELRQQKKIPIFVGGS 101 (300)
T ss_pred HHHHHHHHHCCCCEEEEeCc
Confidence 88887652 2334566543
No 318
>PF03283 PAE: Pectinacetylesterase
Probab=31.54 E-value=63 Score=30.79 Aligned_cols=34 Identities=35% Similarity=0.483 Sum_probs=23.5
Q ss_pred ceEEEEEEchhHHHHHHHHH----hCCcccceEEEecC
Q 015755 98 HHIHLYGTSLGGFLAQLFAQ----HRPRRVRSLVLSNT 131 (401)
Q Consensus 98 ~~v~lvGhS~Gg~ia~~~A~----~~P~~V~~lvli~~ 131 (401)
++|+|.|.|.||.-++..+. ..|..++-..+.++
T Consensus 156 ~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~Ds 193 (361)
T PF03283_consen 156 KQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDS 193 (361)
T ss_pred ceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccc
Confidence 58999999999998876543 45654444444444
No 319
>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional
Probab=31.51 E-value=2.2e+02 Score=24.23 Aligned_cols=57 Identities=9% Similarity=0.092 Sum_probs=36.3
Q ss_pred CcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC----ChHHHHHHH-HHHHHHhCCc
Q 015755 41 PPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW----NHHEWIQAF-EKFLDAIDVH 98 (401)
Q Consensus 41 p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~----s~~~~a~dl-~~~l~~l~~~ 98 (401)
.++++++--+-.+..-.+.+..|.+.|+.|+-+.. |++ +++++++.+ ..+++.++++
T Consensus 116 ~pvii~P~~M~~~p~~~~Nl~~L~~~G~~vi~P~~-g~~a~p~~~~~~~~~~v~~~~~~l~~~ 177 (185)
T PRK06029 116 RRLVLCVRETPLHLGHLRNMTKLAEMGAIIMPPVP-AFYHRPQTLEDMVDQTVGRVLDLFGIE 177 (185)
T ss_pred CCEEEEeccccCCHHHHHHHHHHHHCcCEEECCCc-ccccCCCCHHHHHHHHHHHHHHhcCCC
Confidence 45666663333333345667778877887777664 765 677777754 5677888765
No 320
>PRK11916 electron transfer flavoprotein subunit YdiR; Provisional
Probab=31.45 E-value=3.5e+02 Score=25.22 Aligned_cols=59 Identities=12% Similarity=0.131 Sum_probs=43.3
Q ss_pred HHHHhhCCc-EEEEecCC-CCCChHHHHHHHHHHHHHhCCceEEEEEEch-hHHHHHHHHHhC
Q 015755 60 IMALSMKGY-RVISVDIP-RVWNHHEWIQAFEKFLDAIDVHHIHLYGTSL-GGFLAQLFAQHR 119 (401)
Q Consensus 60 ~~~L~~~g~-~Vi~~D~p-G~~s~~~~a~dl~~~l~~l~~~~v~lvGhS~-Gg~ia~~~A~~~ 119 (401)
...|...|. +|+..|.+ ..+..+.+++.+.++++..+ ..++|++++. |--++.++|.+.
T Consensus 41 ~~~l~~~Gad~V~~~~~~~~~~~~e~~~~al~~~i~~~~-P~~vL~~~T~~Grdla~rlAarL 102 (312)
T PRK11916 41 AQAVMPYGPKCIYVLEQNDALQRTENYAESIAALLKDKH-PAMLLLAATKRGKALAARLSVQL 102 (312)
T ss_pred HHHHHhcCCCEEEEeCCcccccChHHHHHHHHHHHHhcC-CCEEEECCCcchHHHHHHHHHHh
Confidence 344443454 78888988 56678899999999998877 4677777764 557888888775
No 321
>COG2069 CdhD CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein) [Energy production and conversion]
Probab=30.41 E-value=3.9e+02 Score=24.63 Aligned_cols=86 Identities=19% Similarity=0.211 Sum_probs=52.4
Q ss_pred eEEEeeCCeeEEEEEcCCCCCCcEEEeC-------CCCCChH-HHHHH-------HHHHhh-CCcEEEEecCCCC-----
Q 015755 20 LHKIPIGTKQWRYYDFGPKVVPPLICLP-------GTAGTAE-VYYKQ-------IMALSM-KGYRVISVDIPRV----- 78 (401)
Q Consensus 20 ~~~~~~~~~~l~y~~~G~~~~p~vvllH-------G~~~~~~-~~~~~-------~~~L~~-~g~~Vi~~D~pG~----- 78 (401)
.+.+.++|.+-+|+...+...|++|.+- |+..... .|..+ ++...+ -|...+.+.+-+.
T Consensus 101 ~k~V~lGGera~y~FeePqPnppvVtfDVFD~p~pglpkpire~~~dVmedP~eWArk~Vk~fgadmvTiHlIsTdPki~ 180 (403)
T COG2069 101 GKVVMLGGERAFYRFEEPQPNPPVVTFDVFDIPRPGLPKPIREHYDDVMEDPGEWARKCVKKFGADMVTIHLISTDPKIK 180 (403)
T ss_pred ceEEEecCcccccccCCCCCCCCeeEEEeccCCCCCCchhHHHHHHHHhhCHHHHHHHHHHHhCCceEEEEeecCCcccc
Confidence 4567778888666665655566776653 4443332 22222 222222 2667777777664
Q ss_pred -CChHHHHHHHHHHHHHhCCceEEEEEEch
Q 015755 79 -WNHHEWIQAFEKFLDAIDVHHIHLYGTSL 107 (401)
Q Consensus 79 -~s~~~~a~dl~~~l~~l~~~~v~lvGhS~ 107 (401)
-...+.++.+++++++... .++||-|-
T Consensus 181 D~p~~EAak~lEdvLqAVdv--PiiiGGSG 208 (403)
T COG2069 181 DTPAKEAAKTLEDVLQAVDV--PIIIGGSG 208 (403)
T ss_pred CCCHHHHHHHHHHHHHhcCc--CEEecCCC
Confidence 2567889999999998764 45667663
No 322
>PRK04148 hypothetical protein; Provisional
Probab=30.05 E-value=1.2e+02 Score=24.19 Aligned_cols=46 Identities=7% Similarity=-0.011 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCcccceEEEecC
Q 015755 82 HEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRVRSLVLSNT 131 (401)
Q Consensus 82 ~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~~ 131 (401)
+++++-+...+......++..||...|..+|..++... .-++.++.
T Consensus 2 ~~i~~~l~~~~~~~~~~kileIG~GfG~~vA~~L~~~G----~~ViaIDi 47 (134)
T PRK04148 2 DTIAEFIAENYEKGKNKKIVELGIGFYFKVAKKLKESG----FDVIVIDI 47 (134)
T ss_pred hHHHHHHHHhcccccCCEEEEEEecCCHHHHHHHHHCC----CEEEEEEC
Confidence 34444444444333335799999999888888887542 25566665
No 323
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=29.61 E-value=1.5e+02 Score=25.62 Aligned_cols=55 Identities=20% Similarity=0.216 Sum_probs=35.9
Q ss_pred CCcEEEeCCCCCCh---HHHHHHHHHHhhCCcEEEEecCC--CCCChHHHHHHHHHHHHH
Q 015755 40 VPPLICLPGTAGTA---EVYYKQIMALSMKGYRVISVDIP--RVWNHHEWIQAFEKFLDA 94 (401)
Q Consensus 40 ~p~vvllHG~~~~~---~~~~~~~~~L~~~g~~Vi~~D~p--G~~s~~~~a~dl~~~l~~ 94 (401)
+.+|+++||-.... .........|.+.+.+|-.-.++ ||.-..+...++.++|++
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEISPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS--HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCCHHHHHHHHHHHhh
Confidence 45899999998754 23455667777677766655555 677778888888888865
No 324
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=29.40 E-value=1.2e+02 Score=28.13 Aligned_cols=34 Identities=26% Similarity=0.327 Sum_probs=24.9
Q ss_pred HHHHHhCCceEEEEEEchhHHHHHHHHHhCCccc
Q 015755 90 KFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRRV 123 (401)
Q Consensus 90 ~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~V 123 (401)
+.+...++.+-++.|.|.|+.+|..++....+.+
T Consensus 89 ~aL~e~~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 89 KALWEQDLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HHHHHcCCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 3333456667789999999999999998654444
No 325
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=29.29 E-value=1.8e+02 Score=23.80 Aligned_cols=57 Identities=23% Similarity=0.424 Sum_probs=40.2
Q ss_pred HHhhCCc-EEEEecCCCC--CChHHHHHHHHHHHHHhCCceEEEEEEc-hhHHHHHHHHHhC
Q 015755 62 ALSMKGY-RVISVDIPRV--WNHHEWIQAFEKFLDAIDVHHIHLYGTS-LGGFLAQLFAQHR 119 (401)
Q Consensus 62 ~L~~~g~-~Vi~~D~pG~--~s~~~~a~dl~~~l~~l~~~~v~lvGhS-~Gg~ia~~~A~~~ 119 (401)
.+...|. +|+.++-+.. ++.+.+++.+.+++++.+.+ ++++|++ .|.-++.++|.+.
T Consensus 53 ~l~~~G~d~v~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~-lVl~~~t~~g~~la~~lA~~L 113 (164)
T PF01012_consen 53 ALAKYGADKVYHIDDPALAEYDPEAYADALAELIKEEGPD-LVLFGSTSFGRDLAPRLAARL 113 (164)
T ss_dssp HHHSTTESEEEEEE-GGGTTC-HHHHHHHHHHHHHHHT-S-EEEEESSHHHHHHHHHHHHHH
T ss_pred hhhhcCCcEEEEecCccccccCHHHHHHHHHHHHHhcCCC-EEEEcCcCCCCcHHHHHHHHh
Confidence 4443565 6888887754 57889999999999997755 7777775 6667777777764
No 326
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=29.29 E-value=1.6e+02 Score=26.61 Aligned_cols=60 Identities=20% Similarity=0.221 Sum_probs=30.8
Q ss_pred CCcEEEeCCCCCChHHHHH-HHHHHhhCCc-EEEEecCCCCCChHHHHHHHHHHHHHhCCceEEEE
Q 015755 40 VPPLICLPGTAGTAEVYYK-QIMALSMKGY-RVISVDIPRVWNHHEWIQAFEKFLDAIDVHHIHLY 103 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~~~~-~~~~L~~~g~-~Vi~~D~pG~~s~~~~a~dl~~~l~~l~~~~v~lv 103 (401)
...|++-||....+...+. +...|.+.++ +|+.--.-|+.++++.. .-++.-+.++|.|+
T Consensus 142 ~a~vlmGHGt~h~an~~Y~~l~~~l~~~~~~~v~vgtvEG~P~~~~vi----~~L~~~g~k~V~L~ 203 (262)
T PF06180_consen 142 EAVVLMGHGTPHPANAAYSALQAMLKKHGYPNVFVGTVEGYPSLEDVI----ARLKKKGIKKVHLI 203 (262)
T ss_dssp EEEEEEE---SCHHHHHHHHHHHHHHCCT-TTEEEEETTSSSBHHHHH----HHHHHHT-SEEEEE
T ss_pred CEEEEEeCCCCCCccHHHHHHHHHHHhCCCCeEEEEEeCCCCCHHHHH----HHHHhcCCCeEEEE
Confidence 4577888888887664444 4445554442 25554445777765444 34444566666653
No 327
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=28.52 E-value=68 Score=28.07 Aligned_cols=29 Identities=24% Similarity=0.454 Sum_probs=22.9
Q ss_pred cEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecC
Q 015755 42 PLICLPGTAGTAEVYYKQIMALSMKGYRVISVDI 75 (401)
Q Consensus 42 ~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~ 75 (401)
.=||++|.|-+.+. ..|+++||+|+.+|+
T Consensus 39 ~rvLvPgCG~g~D~-----~~La~~G~~VvGvDl 67 (218)
T PF05724_consen 39 GRVLVPGCGKGYDM-----LWLAEQGHDVVGVDL 67 (218)
T ss_dssp EEEEETTTTTSCHH-----HHHHHTTEEEEEEES
T ss_pred CeEEEeCCCChHHH-----HHHHHCCCeEEEEec
Confidence 46888988888763 456678999999998
No 328
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=28.36 E-value=61 Score=24.74 Aligned_cols=31 Identities=29% Similarity=0.524 Sum_probs=23.8
Q ss_pred EEEeCCCCCChHHHHHHHHHHhhC-CcEEEEecC
Q 015755 43 LICLPGTAGTAEVYYKQIMALSMK-GYRVISVDI 75 (401)
Q Consensus 43 vvllHG~~~~~~~~~~~~~~L~~~-g~~Vi~~D~ 75 (401)
+|+|.|.++++++ .++..|+++ |+.++..|-
T Consensus 1 vI~I~G~~gsGKS--T~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGKS--TLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSHH--HHHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCHH--HHHHHHHHHHCCeEEEecc
Confidence 6889999999886 345566654 899988887
No 329
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=28.02 E-value=1e+02 Score=25.38 Aligned_cols=36 Identities=22% Similarity=0.200 Sum_probs=26.3
Q ss_pred CCcEEEeCCCCCChHH--HHHHHHHHhhCCcEEEEecC
Q 015755 40 VPPLICLPGTAGTAEV--YYKQIMALSMKGYRVISVDI 75 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~--~~~~~~~L~~~g~~Vi~~D~ 75 (401)
++.+|++-|..++.++ -..+...|.+.|+.++.+|-
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 3679999999999875 23455667778999999983
No 330
>PF12780 AAA_8: P-loop containing dynein motor region D4; InterPro: IPR024317 The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases. The core of the 380 kDa motor unit contains a concatenated chain of six AAA modules, of which four (D1 - D4) correspond to the ATP binding sites with P-loop signatures described previously, and two (D5, D6) are modules in which the P loop has been lost in evolution. This particular entry represents the D4 ATP-binding domain of the motor [].; PDB: 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A 3VKH_A 3VKG_A.
Probab=27.66 E-value=2.3e+02 Score=25.72 Aligned_cols=53 Identities=15% Similarity=0.414 Sum_probs=38.5
Q ss_pred EEEeCCCCCCh-HHHHHHHHHHhhCCcEEEEecCCCCCChHHHHHHHHHHHHHhCCc
Q 015755 43 LICLPGTAGTA-EVYYKQIMALSMKGYRVISVDIPRVWNHHEWIQAFEKFLDAIDVH 98 (401)
Q Consensus 43 vvllHG~~~~~-~~~~~~~~~L~~~g~~Vi~~D~pG~~s~~~~a~dl~~~l~~l~~~ 98 (401)
++++ |.+|++ .+...++..+. ++.++.++....|+..++-+|+..++...|.+
T Consensus 34 ~LLv-G~~GsGr~sl~rLaa~i~--~~~~~~i~~~~~y~~~~f~~dLk~~~~~ag~~ 87 (268)
T PF12780_consen 34 ALLV-GVGGSGRQSLARLAAFIC--GYEVFQIEITKGYSIKDFKEDLKKALQKAGIK 87 (268)
T ss_dssp EEEE-CTTTSCHHHHHHHHHHHT--TEEEE-TTTSTTTHHHHHHHHHHHHHHHHHCS
T ss_pred eEEe-cCCCccHHHHHHHHHHHh--ccceEEEEeeCCcCHHHHHHHHHHHHHHHhcc
Confidence 4444 555544 45666666664 79999999887889999999999999877654
No 331
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=27.54 E-value=4.7e+02 Score=23.72 Aligned_cols=68 Identities=13% Similarity=0.122 Sum_probs=40.2
Q ss_pred HhhCCcEEEEecCCCCCCh-HHHHHHHHHHHHHhC------CceEEEEEEchhHHHHHHHHHhCC--cccceEEEec
Q 015755 63 LSMKGYRVISVDIPRVWNH-HEWIQAFEKFLDAID------VHHIHLYGTSLGGFLAQLFAQHRP--RRVRSLVLSN 130 (401)
Q Consensus 63 L~~~g~~Vi~~D~pG~~s~-~~~a~dl~~~l~~l~------~~~v~lvGhS~Gg~ia~~~A~~~P--~~V~~lvli~ 130 (401)
+..++|.++.+|-+|.... ..+.+.+..+.+... ...+++|--+.-|.-++..+..+- -.+.++|+--
T Consensus 150 ~~~~~~D~ViIDT~G~~~~d~~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~~~~~~~~~~~~f~~~~~~~g~IlTK 226 (272)
T TIGR00064 150 AKARNIDVVLIDTAGRLQNKVNLMDELKKIKRVIKKVDKDAPDEVLLVLDATTGQNALEQAKVFNEAVGLTGIILTK 226 (272)
T ss_pred HHHCCCCEEEEeCCCCCcchHHHHHHHHHHHHHHhcccCCCCceEEEEEECCCCHHHHHHHHHHHhhCCCCEEEEEc
Confidence 3346899999999998654 345556666665443 445566554444544444444322 2367777754
No 332
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=27.53 E-value=85 Score=28.20 Aligned_cols=22 Identities=23% Similarity=0.390 Sum_probs=18.4
Q ss_pred eEEEEEEchhHHHHHHHHHhCC
Q 015755 99 HIHLYGTSLGGFLAQLFAQHRP 120 (401)
Q Consensus 99 ~v~lvGhS~Gg~ia~~~A~~~P 120 (401)
.-.++|.|.|+.++..++...+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 3468999999999999997654
No 333
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional
Probab=27.44 E-value=4.8e+02 Score=25.59 Aligned_cols=70 Identities=14% Similarity=0.169 Sum_probs=43.7
Q ss_pred HHHHhhCCcEEEEecCCCCC-ChHHHHHHHHHHHHHhCCc---eEEEEEEchhHH-HHHHHHHhC-CcccceEEEe
Q 015755 60 IMALSMKGYRVISVDIPRVW-NHHEWIQAFEKFLDAIDVH---HIHLYGTSLGGF-LAQLFAQHR-PRRVRSLVLS 129 (401)
Q Consensus 60 ~~~L~~~g~~Vi~~D~pG~~-s~~~~a~dl~~~l~~l~~~---~v~lvGhS~Gg~-ia~~~A~~~-P~~V~~lvli 129 (401)
...+..++|.++.+|-+|+. .-...++.+..+++..+.. .++||=-+..+. -...++..+ .-.+.++|+-
T Consensus 292 ~~~l~~~~~D~VLIDTaGr~~rd~~~l~eL~~~~~~~~~~~~~e~~LVLsAt~~~~~~~~~~~~f~~~~~~glIlT 367 (432)
T PRK12724 292 KETLARDGSELILIDTAGYSHRNLEQLERMQSFYSCFGEKDSVENLLVLSSTSSYHHTLTVLKAYESLNYRRILLT 367 (432)
T ss_pred HHHHHhCCCCEEEEeCCCCCccCHHHHHHHHHHHHhhcCCCCCeEEEEEeCCCCHHHHHHHHHHhcCCCCCEEEEE
Confidence 33344458999999999985 4457777778877765422 355555544444 455555554 2246788773
No 334
>PRK09273 hypothetical protein; Provisional
Probab=27.26 E-value=4.2e+02 Score=23.07 Aligned_cols=74 Identities=18% Similarity=0.086 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhhCCcEEEEecCCC----CCChHHHHHHHHHHHHHhCCce-EEEEEEchhHHHHHHHHHhCCcccceEEE
Q 015755 54 EVYYKQIMALSMKGYRVISVDIPR----VWNHHEWIQAFEKFLDAIDVHH-IHLYGTSLGGFLAQLFAQHRPRRVRSLVL 128 (401)
Q Consensus 54 ~~~~~~~~~L~~~g~~Vi~~D~pG----~~s~~~~a~dl~~~l~~l~~~~-v~lvGhS~Gg~ia~~~A~~~P~~V~~lvl 128 (401)
-.+..+...|..+||.|+=+-.-. ..+..+++..+...+..-..+. |.+.|...|..++ |-++|. |.+.+.
T Consensus 17 ~i~~~L~~~L~~~G~eV~D~G~~~~~~~s~dYpd~a~~vA~~V~~g~~d~GIliCGTGiG~siA---ANK~pG-Iraalc 92 (211)
T PRK09273 17 IIYEALKKVADPKGHEVFNYGMYDEEDHQLTYVQNGIMASILLNSKAVDFVVTGCGTGQGAMLA---LNSFPG-VVCGYC 92 (211)
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHcCCCCEEEEEcCcHHHHHHH---HhcCCC-eEEEEe
Confidence 367778888888899886554321 2355666666666664433333 4445666776655 446664 444444
Q ss_pred ecC
Q 015755 129 SNT 131 (401)
Q Consensus 129 i~~ 131 (401)
.++
T Consensus 93 ~d~ 95 (211)
T PRK09273 93 IDP 95 (211)
T ss_pred CCH
Confidence 443
No 335
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=27.11 E-value=85 Score=28.06 Aligned_cols=20 Identities=25% Similarity=0.340 Sum_probs=17.3
Q ss_pred EEEEEchhHHHHHHHHHhCC
Q 015755 101 HLYGTSLGGFLAQLFAQHRP 120 (401)
Q Consensus 101 ~lvGhS~Gg~ia~~~A~~~P 120 (401)
.+.|.|+|+.+|..+|...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 48999999999999998643
No 336
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=26.68 E-value=1.2e+02 Score=27.73 Aligned_cols=32 Identities=28% Similarity=0.439 Sum_probs=23.2
Q ss_pred HHHHHHHHhC-CceEEEEEEchhHHHHHHHHHh
Q 015755 87 AFEKFLDAID-VHHIHLYGTSLGGFLAQLFAQH 118 (401)
Q Consensus 87 dl~~~l~~l~-~~~v~lvGhS~Gg~ia~~~A~~ 118 (401)
....+++.+. .+++.++|+|-||++|-.+|..
T Consensus 80 ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 80 AYRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 3444445543 3478999999999999888854
No 337
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=26.44 E-value=70 Score=31.59 Aligned_cols=53 Identities=25% Similarity=0.306 Sum_probs=33.7
Q ss_pred hCCcEEEEecCCCCCChHHHHHHHHHHHHHhCCceEE-----EEEEchhHHHHHHHHHhC
Q 015755 65 MKGYRVISVDIPRVWNHHEWIQAFEKFLDAIDVHHIH-----LYGTSLGGFLAQLFAQHR 119 (401)
Q Consensus 65 ~~g~~Vi~~D~pG~~s~~~~a~dl~~~l~~l~~~~v~-----lvGhS~Gg~ia~~~A~~~ 119 (401)
.+|.+++.+|=-|.-.+ .+-.+..-++.+..++|+ +.|.|.||.+|..+..++
T Consensus 414 g~G~rILSiDGGGtrG~--~~lqiL~kieklsgKpIheLFD~ICGvSTG~ilA~~Lg~k~ 471 (763)
T KOG4231|consen 414 GQGLRILSIDGGGTRGL--ATLQILKKIEKLSGKPIHELFDLICGVSTGGILAIALGVKL 471 (763)
T ss_pred CCceEEEEecCCCccch--hHHHHHHHHHHhcCCcHHHHHHHHhccCchHHHHHHHHhcC
Confidence 36889999995443222 222333334445555553 689999999999887653
No 338
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=26.13 E-value=4.1e+02 Score=25.62 Aligned_cols=86 Identities=17% Similarity=0.247 Sum_probs=50.7
Q ss_pred CcEEEeCCCCC---ChHHHHHHHHHHhhCCcEEEEecCCCCC-----------ChHHHHHHHHHHHHH---hCCceEEEE
Q 015755 41 PPLICLPGTAG---TAEVYYKQIMALSMKGYRVISVDIPRVW-----------NHHEWIQAFEKFLDA---IDVHHIHLY 103 (401)
Q Consensus 41 p~vvllHG~~~---~~~~~~~~~~~L~~~g~~Vi~~D~pG~~-----------s~~~~a~dl~~~l~~---l~~~~v~lv 103 (401)
.+||+++-+.. .+......+..|.+.|+.|+-+. +|++ +.+++.+.+...+.. +..+++.+.
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~-~g~~ac~~~g~g~~~~~~~i~~~v~~~~~~~~~~~~~~vlit 191 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPD-SGLLACGDEGKGRLAEPETIVKAAEREFSPKEDLEGKRVLIT 191 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCC-CcccccccccCCCCCCHHHHHHHHHHHHhhccccCCceEEEe
Confidence 46777776432 23345667778887777765554 3432 456777776666643 444566666
Q ss_pred EE------------------chhHHHHHHHHHhCCcccceEEEecC
Q 015755 104 GT------------------SLGGFLAQLFAQHRPRRVRSLVLSNT 131 (401)
Q Consensus 104 Gh------------------S~Gg~ia~~~A~~~P~~V~~lvli~~ 131 (401)
|- .||..+|..++.+- ..++++..
T Consensus 192 ~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G----a~V~~~~g 233 (390)
T TIGR00521 192 AGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG----ADVTLITG 233 (390)
T ss_pred cCCccCCCCceeeecCCCcchHHHHHHHHHHHCC----CEEEEeCC
Confidence 65 36677777666553 34555553
No 339
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=26.09 E-value=89 Score=28.02 Aligned_cols=21 Identities=24% Similarity=0.344 Sum_probs=17.8
Q ss_pred EEEEEEchhHHHHHHHHHhCC
Q 015755 100 IHLYGTSLGGFLAQLFAQHRP 120 (401)
Q Consensus 100 v~lvGhS~Gg~ia~~~A~~~P 120 (401)
-.++|.|.|+.++..++...+
T Consensus 38 ~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 38 RKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CeEEEEcHHHHHHHHHHcCCC
Confidence 458899999999999988653
No 340
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=26.00 E-value=95 Score=25.37 Aligned_cols=19 Identities=32% Similarity=0.279 Sum_probs=16.5
Q ss_pred ceEEEEEEchhHHHHHHHH
Q 015755 98 HHIHLYGTSLGGFLAQLFA 116 (401)
Q Consensus 98 ~~v~lvGhS~Gg~ia~~~A 116 (401)
..-++.|.|.|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 4557889999999999998
No 341
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=25.96 E-value=2.4e+02 Score=25.50 Aligned_cols=70 Identities=13% Similarity=0.011 Sum_probs=39.5
Q ss_pred CcEEEeCCCCCChHHHHHHHHHHhhCCc-EEEEecCCCCCChHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHH
Q 015755 41 PPLICLPGTAGTAEVYYKQIMALSMKGY-RVISVDIPRVWNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLF 115 (401)
Q Consensus 41 p~vvllHG~~~~~~~~~~~~~~L~~~g~-~Vi~~D~pG~~s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~ 115 (401)
|.++|.--..--..-...+++.+.+.|. -++.+|+| -+..+++....++.+++.+.|+.=+..--..-.+
T Consensus 96 Pivlm~Y~Npi~~~Gie~F~~~~~~~GvdGlivpDLP-----~ee~~~~~~~~~~~gi~~I~lvaPtt~~~rl~~i 166 (265)
T COG0159 96 PIVLMTYYNPIFNYGIEKFLRRAKEAGVDGLLVPDLP-----PEESDELLKAAEKHGIDPIFLVAPTTPDERLKKI 166 (265)
T ss_pred CEEEEEeccHHHHhhHHHHHHHHHHcCCCEEEeCCCC-----hHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHH
Confidence 4444433333233333445556655554 47888887 4556677777777777777776555554433333
No 342
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=25.55 E-value=3.7e+02 Score=26.00 Aligned_cols=69 Identities=17% Similarity=0.176 Sum_probs=44.6
Q ss_pred HHHHhhCCcEEEEecCCCCC-ChHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCc--ccceEEE
Q 015755 60 IMALSMKGYRVISVDIPRVW-NHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPR--RVRSLVL 128 (401)
Q Consensus 60 ~~~L~~~g~~Vi~~D~pG~~-s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~--~V~~lvl 128 (401)
...+.+.+|.||.+|--|.. .-..+-+.+.++.+.++.+.+++|=-+.=|.-|..-|..+.+ .|.++|+
T Consensus 176 v~~fKke~fdvIIvDTSGRh~qe~sLfeEM~~v~~ai~Pd~vi~VmDasiGQaae~Qa~aFk~~vdvg~vIl 247 (483)
T KOG0780|consen 176 VDRFKKENFDVIIVDTSGRHKQEASLFEEMKQVSKAIKPDEIIFVMDASIGQAAEAQARAFKETVDVGAVIL 247 (483)
T ss_pred HHHHHhcCCcEEEEeCCCchhhhHHHHHHHHHHHhhcCCCeEEEEEeccccHhHHHHHHHHHHhhccceEEE
Confidence 34555578999999998854 344566777777777777777766555555555555554433 3556665
No 343
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=25.39 E-value=1.7e+02 Score=23.78 Aligned_cols=53 Identities=15% Similarity=0.204 Sum_probs=29.0
Q ss_pred HHHHHhhCCcEEEEecCCCC-------------------CChHHHHHH-----HHHHHHHhCCceEEEEEEchhHHH
Q 015755 59 QIMALSMKGYRVISVDIPRV-------------------WNHHEWIQA-----FEKFLDAIDVHHIHLYGTSLGGFL 111 (401)
Q Consensus 59 ~~~~L~~~g~~Vi~~D~pG~-------------------~s~~~~a~d-----l~~~l~~l~~~~v~lvGhS~Gg~i 111 (401)
....|.+.|+.|..+|+.-. |+...+.+. +...|+..-.+-.+++|.|.|+++
T Consensus 5 ~~~~f~~~g~~v~~l~~~~~~~~~~~~~i~~ad~I~~~GG~~~~l~~~l~~t~l~~~i~~~~~~G~vi~G~SAGA~i 81 (154)
T PF03575_consen 5 FRKAFRKLGFEVDQLDLSDRNDADILEAIREADAIFLGGGDTFRLLRQLKETGLDEAIREAYRKGGVIIGTSAGAMI 81 (154)
T ss_dssp HHHHHHHCT-EEEECCCTSCGHHHHHHHHHHSSEEEE--S-HHHHHHHHHHTTHHHHHHHHHHTTSEEEEETHHHHC
T ss_pred HHHHHHHCCCEEEEEeccCCChHHHHHHHHhCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCEEEEEChHHhh
Confidence 34556666888888887652 233232222 233333321123788899999977
No 344
>COG0400 Predicted esterase [General function prediction only]
Probab=25.35 E-value=3.2e+02 Score=23.69 Aligned_cols=56 Identities=16% Similarity=0.018 Sum_probs=42.6
Q ss_pred CCCcEEEeCCCCCCh---HHHHHHHHHHhhCCcEEEEecCC-CCCChHHHHHHHHHHHHH
Q 015755 39 VVPPLICLPGTAGTA---EVYYKQIMALSMKGYRVISVDIP-RVWNHHEWIQAFEKFLDA 94 (401)
Q Consensus 39 ~~p~vvllHG~~~~~---~~~~~~~~~L~~~g~~Vi~~D~p-G~~s~~~~a~dl~~~l~~ 94 (401)
.+.+|+++||--... .....+...|.+.|..|..-+.. ||.-..+..+++..++..
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~GH~i~~e~~~~~~~wl~~ 204 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHEGGHEIPPEELEAARSWLAN 204 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEecCCCcCCHHHHHHHHHHHHh
Confidence 467999999997753 44566777888789998888885 787777777777777754
No 345
>cd03144 GATase1_ScBLP_like Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Saccharomyces cerevisiae biotin-apoprotein ligase (ScBLP). Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Saccharomyces cerevisiae biotin-apoprotein ligase (ScBLP). Biotin-apoprotein ligase modifies proteins by covalently attaching biotin. ScBLP is known to biotinylate acety-CoA carboxylase and pyruvate carboxylase. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, the Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in a typical GATase1 domain is conserved.
Probab=25.18 E-value=2.5e+02 Score=21.79 Aligned_cols=37 Identities=16% Similarity=0.247 Sum_probs=22.5
Q ss_pred CCCCCChHHHHHHHHH----HHHHhCCceEEEEEEchhHHHH
Q 015755 75 IPRVWNHHEWIQAFEK----FLDAIDVHHIHLYGTSLGGFLA 112 (401)
Q Consensus 75 ~pG~~s~~~~a~dl~~----~l~~l~~~~v~lvGhS~Gg~ia 112 (401)
+|| |...+..+.+.. .++..-.+.--++|.++||+++
T Consensus 50 lPG-Ga~~~~~~~L~~~g~~~i~~~v~~g~p~LGIClGAy~a 90 (114)
T cd03144 50 VPG-GADLPYCRALNGKGNRRIRNFVRNGGNYLGICAGAYLA 90 (114)
T ss_pred ECC-CChHHHHHHHHhhCcHHHHHHHHCCCcEEEEecCccce
Confidence 478 777666555432 2222112235678999999998
No 346
>COG0022 AcoB Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]
Probab=24.35 E-value=5.8e+02 Score=23.72 Aligned_cols=97 Identities=15% Similarity=0.239 Sum_probs=57.3
Q ss_pred ccccccCCceEEEeeCCeeEEEEEcCCCCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCC--ChHHHHHHH
Q 015755 11 FVHFKSQVPLHKIPIGTKQWRYYDFGPKVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVW--NHHEWIQAF 88 (401)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~y~~~G~~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~--s~~~~a~dl 88 (401)
|..++..++...++++-++-.....|+. -+||- ++..-..-...++.|.++|+.+-.+|+|-.. +.+.+.+.+
T Consensus 175 Y~~~~~eVP~~~Y~iPlGkA~i~reG~D--vTivt---yg~mv~~al~AAe~l~~~Gis~EVIDLRTl~PlD~etIi~Sv 249 (324)
T COG0022 175 YRSFKGEVPEEDYTIPLGKAKIVREGSD--VTIVT---YGAMVHTALEAAEELEKEGISAEVIDLRTLSPLDKETIIASV 249 (324)
T ss_pred hcccccCCCCCCccccccceeeEecCCc--eEEEE---echHHHHHHHHHHHHhhcCCCeEEEeccccCccCHHHHHHHH
Confidence 4445566776666666555566666652 24443 2222333345566788789999999999653 444444433
Q ss_pred HHHHHHhCCceEEEE-----EEchhHHHHHHHHHh
Q 015755 89 EKFLDAIDVHHIHLY-----GTSLGGFLAQLFAQH 118 (401)
Q Consensus 89 ~~~l~~l~~~~v~lv-----GhS~Gg~ia~~~A~~ 118 (401)
.. . .++++| ..|+|+-++...+.+
T Consensus 250 kK----T--gR~viV~Ea~~~~g~gaei~A~i~e~ 278 (324)
T COG0022 250 KK----T--GRLVIVHEAPKTGGIGAEIAALIAEE 278 (324)
T ss_pred Hh----h--CcEEEEEeccccCChHHHHHHHHHHH
Confidence 32 2 355554 557777777766654
No 347
>TIGR02683 upstrm_HI1419 probable addiction module killer protein. Members of this strictly bacterial protein family are small, at roughly 100 amino acids. The gene is almost invariably the upstream member of a gene pair, where the downstream member is a predicted DNA-binding protein from a clade within Pfam helix-turn-helix family pfam01381. These gene pairs, when found on the bacterial chromosome, often are located with prophage regions, but also in both integrated plasmid regions and near housekeeping genes. Analysis suggests that the gene pair may serve as an addiction module.
Probab=24.25 E-value=1.3e+02 Score=22.14 Aligned_cols=38 Identities=16% Similarity=0.145 Sum_probs=22.6
Q ss_pred ccccCCceEEEeeC-CeeEEEEEcCCCCCCcEEEeCCCCCCh
Q 015755 13 HFKSQVPLHKIPIG-TKQWRYYDFGPKVVPPLICLPGTAGTA 53 (401)
Q Consensus 13 ~~~~~~~~~~~~~~-~~~l~y~~~G~~~~p~vvllHG~~~~~ 53 (401)
.+...+.+-.+.++ +.++.|...+ +..+|++||+-=..
T Consensus 42 ~l~~~~~ElR~r~g~~yRiif~~~~---~~~vvll~gf~Kk~ 80 (95)
T TIGR02683 42 PVGEGVSELRIDFGPGYRVYFTQRG---KVIILLLCGGDKST 80 (95)
T ss_pred CCCCCcEEEEecCCCCEEEEEEEEC---CEEEEEEeCEeccC
Confidence 33333333344555 6778777664 34788999976443
No 348
>COG5023 Tubulin [Cytoskeleton]
Probab=24.11 E-value=1.8e+02 Score=27.65 Aligned_cols=57 Identities=14% Similarity=0.145 Sum_probs=34.9
Q ss_pred CCCCCh-HHHHHHHHHHHHHhCC--c--eEEEEEEchh--------HHHHHHHHHhCCcccceEEEecCC
Q 015755 76 PRVWNH-HEWIQAFEKFLDAIDV--H--HIHLYGTSLG--------GFLAQLFAQHRPRRVRSLVLSNTF 132 (401)
Q Consensus 76 pG~~s~-~~~a~dl~~~l~~l~~--~--~v~lvGhS~G--------g~ia~~~A~~~P~~V~~lvli~~~ 132 (401)
+|||+. .++.+|+.+.|+.... + .=.++=||+| ..+.-++..+||+++..-.-+-|.
T Consensus 103 ~GhYtvG~e~~ddvmd~IrreAd~cD~LqGF~l~HS~gGGTGSG~GslLLerl~~eypkK~~~tfSV~P~ 172 (443)
T COG5023 103 RGHYTVGKEIIDDVMDMIRREADGCDGLQGFLLLHSLGGGTGSGLGSLLLERLREEYPKKIKLTFSVFPA 172 (443)
T ss_pred ccccchhHHHHHHHHHHHHHHhhcCccccceeeeeeccCcCcccHHHHHHHHHHHhcchhheeEEEeccC
Confidence 677765 5677777777765421 1 2344455544 455566777899877666656554
No 349
>cd06409 PB1_MUG70 The MUG70 protein is a product of the meiotically up-regulated gene 70 which has a role in meiosis and harbors a PB1 domain. The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domains depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic amino acid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is
Probab=24.09 E-value=63 Score=23.61 Aligned_cols=47 Identities=13% Similarity=-0.044 Sum_probs=29.4
Q ss_pred cCCcceeeecCcccccccchhhHHHHhhhhhcccceeeeehhhhhhccc
Q 015755 347 AGQGDAVILLPFPLLREQITVSEILLQLTLVTLVPLLVGWLYITSKHCW 395 (401)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (401)
.++.|.+. -.+..-+..|++.+.++|.+..-..=.++|.|+--||-|
T Consensus 9 ~GrvhRf~--~~~s~~~~~L~~~I~~Rl~~d~~~~~~~~L~YlDDEgD~ 55 (86)
T cd06409 9 KGRVHRFR--LRPSESLEELRTLISQRLGDDDFETHLYALSYVDDEGDI 55 (86)
T ss_pred CCCEEEEE--ecCCCCHHHHHHHHHHHhCCccccCCcccEEEEcCCCCE
Confidence 33444443 333456666777766665544433447899999999988
No 350
>cd01985 ETF The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=23.73 E-value=2e+02 Score=24.00 Aligned_cols=53 Identities=21% Similarity=0.276 Sum_probs=39.4
Q ss_pred CCc-EEEEecCCC--CCChHHHHHHHHHHHHHhCCceEEEEEEc-hhHHHHHHHHHhC
Q 015755 66 KGY-RVISVDIPR--VWNHHEWIQAFEKFLDAIDVHHIHLYGTS-LGGFLAQLFAQHR 119 (401)
Q Consensus 66 ~g~-~Vi~~D~pG--~~s~~~~a~dl~~~l~~l~~~~v~lvGhS-~Gg~ia~~~A~~~ 119 (401)
.|. +|+.++-+. .++.+.+++.+.++++..+ ..++|+|++ .|+.++.++|.+.
T Consensus 58 ~Gad~v~~~~~~~~~~~~~~~~a~~l~~~i~~~~-p~~Vl~g~t~~g~~la~rlA~~L 114 (181)
T cd01985 58 MGADKVLLVEDPALAGYDPEATAKALAALIKKEK-PDLILAGATSIGKQLAPRVAALL 114 (181)
T ss_pred hCCCEEEEEecCcccCCChHHHHHHHHHHHHHhC-CCEEEECCcccccCHHHHHHHHh
Confidence 454 677777764 4678999999999998877 456666654 6777888888764
No 351
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=23.40 E-value=4.6e+02 Score=22.26 Aligned_cols=38 Identities=21% Similarity=0.349 Sum_probs=26.9
Q ss_pred CChHHHHHHHHHHHHHhCC--------ceEEEEEEchhHHHHHHHH
Q 015755 79 WNHHEWIQAFEKFLDAIDV--------HHIHLYGTSLGGFLAQLFA 116 (401)
Q Consensus 79 ~s~~~~a~dl~~~l~~l~~--------~~v~lvGhS~Gg~ia~~~A 116 (401)
+..+.+.-|+..++..+.. +=++++|.+.|+.+...+-
T Consensus 67 g~~~si~yd~~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r 112 (185)
T PF09314_consen 67 GSAESIIYDFLSLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLR 112 (185)
T ss_pred CchHHHHHHHHHHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHH
Confidence 5678888888888777621 1356789998888776543
No 352
>TIGR03702 lip_kinase_YegS lipid kinase YegS. Members of this protein family are designated YegS, an apparent lipid kinase family in the Proteobacteria. Bakali, et al. report phosphatidylglycerol kinase activity for the member from Escherichia coli, but refrain from calling that activity synonymous with its biological role. Note that a broader, subfamily-type model (TIGR00147), includes this family but also multiple paralogs in some species and varied functions.
Probab=23.19 E-value=3.9e+02 Score=24.35 Aligned_cols=47 Identities=13% Similarity=0.100 Sum_probs=29.1
Q ss_pred cEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCCCCCChHHHHHHH
Q 015755 42 PLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWNHHEWIQAF 88 (401)
Q Consensus 42 ~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~pG~~s~~~~a~dl 88 (401)
.+++++|-++....|..+...|.+.|+.+....-...+...++++.+
T Consensus 2 ~~~I~N~~~~~~~~~~~~~~~l~~~g~~~~v~~t~~~~~a~~~a~~~ 48 (293)
T TIGR03702 2 ALLILNGKQADNEDVREAVGDLRDEGIQLHVRVTWEKGDAQRYVAEA 48 (293)
T ss_pred EEEEEeCCccchhHHHHHHHHHHHCCCeEEEEEecCCCCHHHHHHHH
Confidence 46777877777677888888888777765443322223445555443
No 353
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=23.16 E-value=1.5e+02 Score=27.93 Aligned_cols=83 Identities=18% Similarity=0.094 Sum_probs=55.5
Q ss_pred cEEEeCCCCCCh-------HHHHHHHHHHhhC-CcEEEEecCCCC--CChHHHHHHHHHHHHHhCCceEEEEEEchhHHH
Q 015755 42 PLICLPGTAGTA-------EVYYKQIMALSMK-GYRVISVDIPRV--WNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFL 111 (401)
Q Consensus 42 ~vvllHG~~~~~-------~~~~~~~~~L~~~-g~~Vi~~D~pG~--~s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~i 111 (401)
.+|++|+...+. +.|..+...+.++ .+.++-.-+-|+ |+.+.-+..+..+++. ..-+++..|+.-.+
T Consensus 199 s~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~---g~~~~laQSyAKNM 275 (427)
T KOG1411|consen 199 SIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVED---GHEILLAQSYAKNM 275 (427)
T ss_pred cEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHc---CCceEeehhhhhhc
Confidence 699999888765 4898877776654 344443334454 6778878888888765 23455666665544
Q ss_pred HHHHHHhCCcccceEEEecCC
Q 015755 112 AQLFAQHRPRRVRSLVLSNTF 132 (401)
Q Consensus 112 a~~~A~~~P~~V~~lvli~~~ 132 (401)
.+ |.++|.++-+++..
T Consensus 276 GL-----YgERvGa~svvc~~ 291 (427)
T KOG1411|consen 276 GL-----YGERVGALSVVCKD 291 (427)
T ss_pred ch-----hhhccceeEEEecC
Confidence 43 67899998777753
No 354
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=22.84 E-value=1e+02 Score=27.47 Aligned_cols=17 Identities=24% Similarity=0.475 Sum_probs=15.5
Q ss_pred EEEEEchhHHHHHHHHH
Q 015755 101 HLYGTSLGGFLAQLFAQ 117 (401)
Q Consensus 101 ~lvGhS~Gg~ia~~~A~ 117 (401)
.++|.|+|+.+|..+|.
T Consensus 34 ~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 34 RFAGASAGSLVAAVLLT 50 (246)
T ss_pred EEEEECHHHHHHHHHhc
Confidence 68999999999999984
No 355
>PF00585 Thr_dehydrat_C: C-terminal regulatory domain of Threonine dehydratase; InterPro: IPR001721 Threonine dehydratases including Serine/threonine dehydratase (see IPR001926 from INTERPRO) contain a common C-terminal region that may have a regulatory role. Some members contain two copies of this region [].; GO: 0004794 L-threonine ammonia-lyase activity, 0009097 isoleucine biosynthetic process; PDB: 1TDJ_A 3IAU_A.
Probab=22.62 E-value=2.2e+02 Score=20.93 Aligned_cols=42 Identities=21% Similarity=0.228 Sum_probs=26.1
Q ss_pred eeEEEEEcCCCCCCcEEEeCCCCCChHHHHHHHHHHhhCCcEEE
Q 015755 28 KQWRYYDFGPKVVPPLICLPGTAGTAEVYYKQIMALSMKGYRVI 71 (401)
Q Consensus 28 ~~l~y~~~G~~~~p~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi 71 (401)
..++|+..|...++++|=+. . ........+...|.+.||.+.
T Consensus 38 TeF~YR~~~~~~a~vlvgi~-v-~~~~~~~~l~~~L~~~gy~~~ 79 (91)
T PF00585_consen 38 TEFHYRYSGDDFARVLVGIE-V-PDAEDLEELIERLKALGYPYE 79 (91)
T ss_dssp EEEEEE-TTTSCSEEEEEEE---SSTHHHHHHHHHHTSSS-EEE
T ss_pred EEEEEcCCCCCeeeEEEEEE-e-CCHHHHHHHHHHHHHcCCCeE
Confidence 34788888886555555554 2 233446788888987788764
No 356
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=22.61 E-value=1.6e+02 Score=27.21 Aligned_cols=23 Identities=22% Similarity=0.291 Sum_probs=18.9
Q ss_pred cCCCCCCcEEEeCCCCCChHHHH
Q 015755 35 FGPKVVPPLICLPGTAGTAEVYY 57 (401)
Q Consensus 35 ~G~~~~p~vvllHG~~~~~~~~~ 57 (401)
.+.+.+|.+|=+||+.|+++.|-
T Consensus 104 n~~p~KPLvLSfHG~tGTGKN~V 126 (344)
T KOG2170|consen 104 NPNPRKPLVLSFHGWTGTGKNYV 126 (344)
T ss_pred CCCCCCCeEEEecCCCCCchhHH
Confidence 34467899999999999999874
No 357
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=22.46 E-value=4.2e+02 Score=21.46 Aligned_cols=36 Identities=22% Similarity=0.279 Sum_probs=20.6
Q ss_pred CCCcEEEe-CCCCCChHHHHHHHHHHhhCCcEEEEec
Q 015755 39 VVPPLICL-PGTAGTAEVYYKQIMALSMKGYRVISVD 74 (401)
Q Consensus 39 ~~p~vvll-HG~~~~~~~~~~~~~~L~~~g~~Vi~~D 74 (401)
.+|.|++. -|+-+...--.-....|.+.||.|+..-
T Consensus 11 ~rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g 47 (143)
T COG2185 11 ARPRVLVAKLGLDGHDRGAKVIARALADAGFEVINLG 47 (143)
T ss_pred CCceEEEeccCccccccchHHHHHHHHhCCceEEecC
Confidence 35655444 4544433333344567787899988653
No 358
>PF02502 LacAB_rpiB: Ribose/Galactose Isomerase; InterPro: IPR003500 This entry represents the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB). Galactose-6-phosphate isomerase (5.3.1.26 from EC) is a heteromultimeric protein consisting of subunits LacA and LacB, and catalyses the conversion of D-galactose 6-phosphate to D-tagatose and 6-phosphate in the tagatose 6-phosphate pathway of lactose catabolism []. Galactose-6-phosphate isomerase is induced by galactose or lactose. This entry represents the LacB subunit. Ribose 5-phosphate isomerase (5.3.1.6 from EC) forms a homodimer and catalyses the interconversion of D-ribose 5-phosphate and D-ribulose 5-phosphate in the non-oxidative branch of the pentose phosphate pathway. This reaction permits the synthesis of ribose from other sugars, as well as the recycling of sugars from nucleotide breakdown. Two unrelated enzymes can catalyse this reaction: RpiA (found in most organisms) and RpiB (found in some bacteria and eukaryotes). RpiB is also involved in metabolism of the rare sugar, allose, in addition to ribose sugars. The structures of RpiA and RpiB are distinct, RpiB having a Rossmann-type alpha/beta/alpha sandwich topology [].; GO: 0005975 carbohydrate metabolic process; PDB: 3HEE_A 3HE8_A 3PH3_B 3PH4_B 3ONO_A 4EM8_B 3S5P_B 1O1X_A 2BES_D 2VVP_D ....
Probab=22.32 E-value=4e+02 Score=21.50 Aligned_cols=70 Identities=21% Similarity=0.283 Sum_probs=39.6
Q ss_pred HHHHHHHhhCCcEEEEecCCC--CCChHHHHHHHHHHHHHhCCce-EEEEEEchhHHHHHHHHHhCCcccceEEEec
Q 015755 57 YKQIMALSMKGYRVISVDIPR--VWNHHEWIQAFEKFLDAIDVHH-IHLYGTSLGGFLAQLFAQHRPRRVRSLVLSN 130 (401)
Q Consensus 57 ~~~~~~L~~~g~~Vi~~D~pG--~~s~~~~a~dl~~~l~~l~~~~-v~lvGhS~Gg~ia~~~A~~~P~~V~~lvli~ 130 (401)
..+..+|.++||.|+=+-.-. ..++.+++..+...+..-..++ |.+.|..+|-.++ |-++|. |++.+.-+
T Consensus 15 ~~i~~~L~~~g~eV~D~G~~~~~~~dy~~~a~~va~~V~~~~~d~GIliCgtGiG~~ia---ANK~~G-IrAa~~~d 87 (140)
T PF02502_consen 15 EAIKEYLEEKGYEVIDFGTYSEDSVDYPDFAEKVAEAVASGEADRGILICGTGIGMSIA---ANKVPG-IRAALCSD 87 (140)
T ss_dssp HHHHHHHHHTTEEEEEESESSTST--HHHHHHHHHHHHHTTSSSEEEEEESSSHHHHHH---HHTSTT---EEE-SS
T ss_pred HHHHHHHHHCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHcccCCeEEEEcCCChhhhhH---hhcCCC-EEEEeeCC
Confidence 345678888899887665443 2356677777766665444443 4556777776654 456664 44444443
No 359
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=22.10 E-value=7.5e+02 Score=24.21 Aligned_cols=78 Identities=9% Similarity=0.050 Sum_probs=49.3
Q ss_pred ChHHHHHHHHHHhh-CCcEEEEecCCCCCC-hHHHHHHHHHHHHHhCCceEEEE-EEchhHHHHHHHHHhCC-cccceEE
Q 015755 52 TAEVYYKQIMALSM-KGYRVISVDIPRVWN-HHEWIQAFEKFLDAIDVHHIHLY-GTSLGGFLAQLFAQHRP-RRVRSLV 127 (401)
Q Consensus 52 ~~~~~~~~~~~L~~-~g~~Vi~~D~pG~~s-~~~~a~dl~~~l~~l~~~~v~lv-GhS~Gg~ia~~~A~~~P-~~V~~lv 127 (401)
+...+...+..+.. .+|.++.+|-+|... -....+.+..+++......++|+ .-++++.-+...+..+- -.+.++|
T Consensus 304 d~~~L~~aL~~lk~~~~~DvVLIDTaGRs~kd~~lm~EL~~~lk~~~PdevlLVLsATtk~~d~~~i~~~F~~~~idglI 383 (436)
T PRK11889 304 DEAAMTRALTYFKEEARVDYILIDTAGKNYRASETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKDIHIDGIV 383 (436)
T ss_pred CHHHHHHHHHHHHhccCCCEEEEeCccccCcCHHHHHHHHHHHhhcCCCeEEEEECCccChHHHHHHHHHhcCCCCCEEE
Confidence 34444555555553 369999999999743 34556667777776555566665 23356666666666543 3578888
Q ss_pred Ee
Q 015755 128 LS 129 (401)
Q Consensus 128 li 129 (401)
+-
T Consensus 384 ~T 385 (436)
T PRK11889 384 FT 385 (436)
T ss_pred EE
Confidence 73
No 360
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=21.72 E-value=1.7e+02 Score=24.04 Aligned_cols=43 Identities=7% Similarity=0.072 Sum_probs=34.9
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHHhCCceEEEEEEchhHHH
Q 015755 69 RVISVDIPRVWNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFL 111 (401)
Q Consensus 69 ~Vi~~D~pG~~s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~i 111 (401)
-++.+|++|.|--..+.+-+..-.+.+|+++++++-.+-..+.
T Consensus 71 laV~pd~r~~G~G~~Ll~~~~~~Ar~~gi~~lf~LTt~~~~~F 113 (153)
T COG1246 71 LAVHPDYRGSGRGERLLERLLADARELGIKELFVLTTRSPEFF 113 (153)
T ss_pred EEECHHhcCCCcHHHHHHHHHHHHHHcCCceeeeeecccHHHH
Confidence 4566779999999999999999999999999998876544443
No 361
>cd03016 PRX_1cys Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by reducing and detoxifying hydrogen peroxide, peroxynitrite, and organic hydroperoxides. As with all other PRXs, a cysteine sulfenic acid intermediate is formed upon reaction of 1-cys PRX with its substrates. Having no resolving cysteine, the oxidized enzyme is resolved by an external small-molecule or protein reductant such as thioredoxin or glutaredoxin. Similar to typical 2-cys PRX, 1-cys PRX forms a functional dimeric unit with a B-type interface, as well as a decameric structure which is stabilized in the reduced form of the enzyme. Other oligomeric forms, tetramers and hexamers, have also been reported. Mammalian 1-cys PRX is localized cellularly in the cytosol and is expressed at high levels in brain, eye, testes an
Probab=21.57 E-value=4.8e+02 Score=22.30 Aligned_cols=90 Identities=16% Similarity=0.260 Sum_probs=47.8
Q ss_pred CCcEEEeCCCCCC----hH--HHHHHHHHHhhCCcEEEEecCCCCCChHHHHHHHHHHHHHhCCceEEEEEEchhHHHHH
Q 015755 40 VPPLICLPGTAGT----AE--VYYKQIMALSMKGYRVISVDIPRVWNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQ 113 (401)
Q Consensus 40 ~p~vvllHG~~~~----~~--~~~~~~~~L~~~g~~Vi~~D~pG~~s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~ 113 (401)
++.|||.|-...+ .+ .+....+.+.++|..|+.+..-...+...+.+++....+ .++. +-+ .....+.++-
T Consensus 26 k~vvlf~~pa~~cp~C~~el~~l~~~~~~f~~~gv~vigvS~D~~~~~~~~~~~i~~~~~-~~~~-fpi-l~D~~~~ia~ 102 (203)
T cd03016 26 SWGILFSHPADFTPVCTTELGAFAKLAPEFKKRNVKLIGLSVDSVESHIKWIEDIEEYTG-VEIP-FPI-IADPDREVAK 102 (203)
T ss_pred CEEEEEEecCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHhhHHHhcC-CCCc-eeE-EECchHHHHH
Confidence 3466666644322 11 244455667777899988875443344455566655443 3332 222 2344556665
Q ss_pred HHHHhCC-----cccceEEEecCC
Q 015755 114 LFAQHRP-----RRVRSLVLSNTF 132 (401)
Q Consensus 114 ~~A~~~P-----~~V~~lvli~~~ 132 (401)
.+....+ ..+++.++|++.
T Consensus 103 ~yg~~~~~~~~~~~~r~~fiID~~ 126 (203)
T cd03016 103 LLGMIDPDAGSTLTVRAVFIIDPD 126 (203)
T ss_pred HcCCccccCCCCceeeEEEEECCC
Confidence 5544332 235567888763
No 362
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=21.51 E-value=1e+02 Score=27.20 Aligned_cols=30 Identities=17% Similarity=0.409 Sum_probs=22.8
Q ss_pred cEEEeCCCCCChHHHHHHHHHHhhCCcEEEEecCC
Q 015755 42 PLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIP 76 (401)
Q Consensus 42 ~vvllHG~~~~~~~~~~~~~~L~~~g~~Vi~~D~p 76 (401)
.=||++|.|-+.+. ..|+++||+|+.+|+-
T Consensus 45 ~rvLvPgCGkg~D~-----~~LA~~G~~V~GvDlS 74 (226)
T PRK13256 45 SVCLIPMCGCSIDM-----LFFLSKGVKVIGIELS 74 (226)
T ss_pred CeEEEeCCCChHHH-----HHHHhCCCcEEEEecC
Confidence 45788888777653 4567789999999983
No 363
>PRK00090 bioD dithiobiotin synthetase; Reviewed
Probab=21.38 E-value=3.3e+02 Score=23.43 Aligned_cols=72 Identities=13% Similarity=0.074 Sum_probs=37.9
Q ss_pred HHHHHHHhhCCcEEEEecCCCCCChH-HHHHHHHHHHHHhCCceEEEEEEchhHHH----HHHHHHhCCcccceEEEe
Q 015755 57 YKQIMALSMKGYRVISVDIPRVWNHH-EWIQAFEKFLDAIDVHHIHLYGTSLGGFL----AQLFAQHRPRRVRSLVLS 129 (401)
Q Consensus 57 ~~~~~~L~~~g~~Vi~~D~pG~~s~~-~~a~dl~~~l~~l~~~~v~lvGhS~Gg~i----a~~~A~~~P~~V~~lvli 129 (401)
...+..+. ++|.++.+|-+|..... .......+++..++..-+.+...+.|+.- +...+..+.-.+.++|+-
T Consensus 94 ~~~~~~l~-~~~D~viIEg~gg~~~~~~~~~~~adl~~~l~~pvilV~~~~~~~i~~~~~~i~~l~~~~~~i~gvIlN 170 (222)
T PRK00090 94 SAALRRLA-QQYDLVLVEGAGGLLVPLTEDLTLADLAKQLQLPVILVVGVKLGCINHTLLTLEAIRARGLPLAGWVAN 170 (222)
T ss_pred HHHHHHHH-hhCCEEEEECCCceeccCCCCCcHHHHHHHhCCCEEEEECCCCcHHHHHHHHHHHHHHCCCCeEEEEEc
Confidence 33444555 57999999988742111 11123445666676554555566677532 222233334456666654
No 364
>COG3621 Patatin [General function prediction only]
Probab=21.36 E-value=1.9e+02 Score=27.05 Aligned_cols=52 Identities=29% Similarity=0.376 Sum_probs=34.0
Q ss_pred CcEEEEecCCCCCChHHHHHHHHHHHHHhCCc----eEEE-EEEchhHHHHHHHHHhCC
Q 015755 67 GYRVISVDIPRVWNHHEWIQAFEKFLDAIDVH----HIHL-YGTSLGGFLAQLFAQHRP 120 (401)
Q Consensus 67 g~~Vi~~D~pG~~s~~~~a~dl~~~l~~l~~~----~v~l-vGhS~Gg~ia~~~A~~~P 120 (401)
.|++..+|==|. --.+...+...+++...+ .+.+ -|.|.||.+++.+|...+
T Consensus 8 k~rIlsldGGGv--rG~i~lE~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~ks 64 (394)
T COG3621 8 KYRILSLDGGGV--RGAILLEKLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGKS 64 (394)
T ss_pred ceeEEEecCCcc--ccHHHHHHHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCCC
Confidence 377888874332 225556666666664333 3444 599999999999987543
No 365
>COG1751 Uncharacterized conserved protein [Function unknown]
Probab=21.27 E-value=3.7e+02 Score=22.05 Aligned_cols=50 Identities=16% Similarity=0.145 Sum_probs=37.5
Q ss_pred EEecCCCCCChHHHHHHHHHHHHHhCCceEEEEEEchhHHHHHHHHHhCCcc
Q 015755 71 ISVDIPRVWNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQHRPRR 122 (401)
Q Consensus 71 i~~D~pG~~s~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~A~~~P~~ 122 (401)
+.+|.||--+.+.-.+...+-.+.++++++++ -|.-|+.|+.++..-+..
T Consensus 2 ~yf~~pG~eNT~~tle~a~erA~elgik~~vV--AS~tG~tA~k~lemveg~ 51 (186)
T COG1751 2 VYFEKPGKENTDETLEIAVERAKELGIKHIVV--ASSTGYTALKALEMVEGD 51 (186)
T ss_pred ccccCCcccchHHHHHHHHHHHHhcCcceEEE--EecccHHHHHHHHhcccC
Confidence 46888998888888887777778888876554 355678888887666554
No 366
>PRK11460 putative hydrolase; Provisional
Probab=21.26 E-value=3.8e+02 Score=23.40 Aligned_cols=56 Identities=13% Similarity=-0.116 Sum_probs=35.5
Q ss_pred CCcEEEeCCCCCChH---HHHHHHHHHhhCCcEEEEecCC--CCCChHHHHHHHHHHHHHh
Q 015755 40 VPPLICLPGTAGTAE---VYYKQIMALSMKGYRVISVDIP--RVWNHHEWIQAFEKFLDAI 95 (401)
Q Consensus 40 ~p~vvllHG~~~~~~---~~~~~~~~L~~~g~~Vi~~D~p--G~~s~~~~a~dl~~~l~~l 95 (401)
.++|+++||-....- .-......|.+.|..+...-++ ||.-..+..+++..+++..
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~ 208 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYT 208 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHH
Confidence 568999999877643 3344556666566655444444 6765666677777766554
No 367
>PRK12726 flagellar biosynthesis regulator FlhF; Provisional
Probab=21.16 E-value=7.7e+02 Score=23.95 Aligned_cols=78 Identities=6% Similarity=0.025 Sum_probs=46.3
Q ss_pred ChHHHHHHHHHHhh-CCcEEEEecCCCCC-ChHHHHHHHHHHHHHhCCceEEEEEEc-hhHHHHHHHHHhC-CcccceEE
Q 015755 52 TAEVYYKQIMALSM-KGYRVISVDIPRVW-NHHEWIQAFEKFLDAIDVHHIHLYGTS-LGGFLAQLFAQHR-PRRVRSLV 127 (401)
Q Consensus 52 ~~~~~~~~~~~L~~-~g~~Vi~~D~pG~~-s~~~~a~dl~~~l~~l~~~~v~lvGhS-~Gg~ia~~~A~~~-P~~V~~lv 127 (401)
+...+...+..+.. .++.+|.+|-+|.. .-+++.+.+..+++.....-++++.-+ +...-+..++..+ .-.+.++|
T Consensus 269 dp~dL~~al~~l~~~~~~D~VLIDTAGr~~~d~~~l~EL~~l~~~~~p~~~~LVLsag~~~~d~~~i~~~f~~l~i~glI 348 (407)
T PRK12726 269 SPAELEEAVQYMTYVNCVDHILIDTVGRNYLAEESVSEISAYTDVVHPDLTCFTFSSGMKSADVMTILPKLAEIPIDGFI 348 (407)
T ss_pred CHHHHHHHHHHHHhcCCCCEEEEECCCCCccCHHHHHHHHHHhhccCCceEEEECCCcccHHHHHHHHHhcCcCCCCEEE
Confidence 44455555555542 47999999999974 345666777777776655445555532 3333334444444 33477888
Q ss_pred Ee
Q 015755 128 LS 129 (401)
Q Consensus 128 li 129 (401)
+-
T Consensus 349 ~T 350 (407)
T PRK12726 349 IT 350 (407)
T ss_pred EE
Confidence 73
No 368
>KOG4037 consensus Photoreceptor synaptic vesicle protein HRG4/UNC-119 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=20.99 E-value=1.1e+02 Score=25.39 Aligned_cols=18 Identities=22% Similarity=0.207 Sum_probs=13.1
Q ss_pred ecCcccccccchhhHHHH
Q 015755 355 LLPFPLLREQITVSEILL 372 (401)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~ 372 (401)
+.|.-+-.|++|..|+|-
T Consensus 60 itP~dVL~L~~IT~dyLC 77 (240)
T KOG4037|consen 60 ITPEDVLGLQRITGDYLC 77 (240)
T ss_pred CChHHhhccccccCCcee
Confidence 366667778888888774
No 369
>TIGR02113 coaC_strep phosphopantothenoylcysteine decarboxylase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the N-terminal region of TIGR00521, corresponding to phosphopantothenoylcysteine decarboxylase activity.
Probab=20.99 E-value=1.8e+02 Score=24.45 Aligned_cols=36 Identities=19% Similarity=0.270 Sum_probs=24.8
Q ss_pred CCcEEEeCCCCC---ChHHHHHHHHHHhhCCcEEEEecC
Q 015755 40 VPPLICLPGTAG---TAEVYYKQIMALSMKGYRVISVDI 75 (401)
Q Consensus 40 ~p~vvllHG~~~---~~~~~~~~~~~L~~~g~~Vi~~D~ 75 (401)
+.+|++++.+.. .+......+..|.+.|+.|+-++.
T Consensus 112 ~~pv~i~PaMn~~M~~~p~~~~nl~~L~~~G~~vi~P~~ 150 (177)
T TIGR02113 112 ETPKLIAPAMNTKMYQNPITQRNIKILKKIGYQEIQPKE 150 (177)
T ss_pred CCCEEEEeCCCHHHhCCHHHHHHHHHHHHCCCEEECCCc
Confidence 347777775443 333557778888878998888776
No 370
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=20.71 E-value=3.1e+02 Score=25.49 Aligned_cols=65 Identities=23% Similarity=0.314 Sum_probs=42.4
Q ss_pred CCcEEEeCCCCCChHHHHHHHHHHhh-CCcEEEEecC----CCC----------------------------CChHHHHH
Q 015755 40 VPPLICLPGTAGTAEVYYKQIMALSM-KGYRVISVDI----PRV----------------------------WNHHEWIQ 86 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~~~~~~~~L~~-~g~~Vi~~D~----pG~----------------------------~s~~~~a~ 86 (401)
.+.+++|=|-.+++++-. .-.|++ -|-.||..|- +|. ++..++.+
T Consensus 2 ~~~~i~I~GPTAsGKT~l--ai~LAk~~~~eIIs~DSmQvYr~mdIGTAKps~~e~~~vpHhliDi~~p~e~ysa~~f~~ 79 (308)
T COG0324 2 KPKLIVIAGPTASGKTAL--AIALAKRLGGEIISLDSMQVYRGLDIGTAKPSLEELAGVPHHLIDIRDPTESYSAAEFQR 79 (308)
T ss_pred CccEEEEECCCCcCHHHH--HHHHHHHcCCcEEecchhhhcCCCcccCCCCCHHHHcCCCEEEecccCccccccHHHHHH
Confidence 357888888888887643 334443 2668999994 332 46677888
Q ss_pred HHHHHHHHhCC--ceEEEEEEc
Q 015755 87 AFEKFLDAIDV--HHIHLYGTS 106 (401)
Q Consensus 87 dl~~~l~~l~~--~~v~lvGhS 106 (401)
++...++.+.. +-.+|||-|
T Consensus 80 ~a~~~i~~i~~rgk~pIlVGGT 101 (308)
T COG0324 80 DALAAIDDILARGKLPILVGGT 101 (308)
T ss_pred HHHHHHHHHHhCCCCcEEEccH
Confidence 88877776643 346677754
No 371
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=20.68 E-value=1.1e+02 Score=27.81 Aligned_cols=65 Identities=15% Similarity=0.218 Sum_probs=43.6
Q ss_pred CCcEEEeCCCCCChH--HHHHHHHHHhhCCcEEEEecCCCCCChHHHHHH-HHHHHHHhCC-ceEEEEEEch
Q 015755 40 VPPLICLPGTAGTAE--VYYKQIMALSMKGYRVISVDIPRVWNHHEWIQA-FEKFLDAIDV-HHIHLYGTSL 107 (401)
Q Consensus 40 ~p~vvllHG~~~~~~--~~~~~~~~L~~~g~~Vi~~D~pG~~s~~~~a~d-l~~~l~~l~~-~~v~lvGhS~ 107 (401)
.|+||++.|+-+++. .-..++..|..+|++|.++..| +-++...+ +-.+-.++.. ..+.|+=.|+
T Consensus 55 ~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P---t~eE~~~p~lWRfw~~lP~~G~i~IF~RSW 123 (264)
T TIGR03709 55 RSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP---SAEELDHDFLWRIHKALPERGEIGIFNRSH 123 (264)
T ss_pred CcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC---CHHHHcCchHHHHHHhCCCCCeEEEEcCcc
Confidence 589999999988775 4566777787789999999776 33433332 4445555543 2566655554
No 372
>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional
Probab=20.42 E-value=3.2e+02 Score=25.45 Aligned_cols=58 Identities=10% Similarity=0.039 Sum_probs=41.4
Q ss_pred HHhhCCc-EEEEecCCCC-CChHHHHHHHHHHHHHhCCceEEEEEEch-hHHHHHHHHHhC
Q 015755 62 ALSMKGY-RVISVDIPRV-WNHHEWIQAFEKFLDAIDVHHIHLYGTSL-GGFLAQLFAQHR 119 (401)
Q Consensus 62 ~L~~~g~-~Vi~~D~pG~-~s~~~~a~dl~~~l~~l~~~~v~lvGhS~-Gg~ia~~~A~~~ 119 (401)
.+...|. +|+..|.+.. ++.+.+++.+.++++..+...++|+|++. |--++-++|.+.
T Consensus 43 ~~~~~Gad~V~~~~~~~~~~~~e~~~~al~~~i~~~~p~~~vl~~~T~~Gr~laprlAa~l 103 (313)
T PRK03363 43 QAIQLGANHVWKLSGKPDDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRL 103 (313)
T ss_pred HHHhcCCCEEEEecCcccccChHHHHHHHHHHHHhhCCCcEEEEcCCccHHHHHHHHHHHh
Confidence 3433454 6888887653 67789999999999887644588888774 666777777764
No 373
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=20.38 E-value=1.2e+02 Score=26.75 Aligned_cols=68 Identities=19% Similarity=0.312 Sum_probs=45.8
Q ss_pred CCcEEEeCCCCCChH--HHHHHHHHHhhCCcEEEEecCCCCCChHHHHHH-HHHHHHHhCC-ceEEEEEEchhHH
Q 015755 40 VPPLICLPGTAGTAE--VYYKQIMALSMKGYRVISVDIPRVWNHHEWIQA-FEKFLDAIDV-HHIHLYGTSLGGF 110 (401)
Q Consensus 40 ~p~vvllHG~~~~~~--~~~~~~~~L~~~g~~Vi~~D~pG~~s~~~~a~d-l~~~l~~l~~-~~v~lvGhS~Gg~ 110 (401)
.|+||++.|+-+++. .-..++..|..+|++|.++..|- -++...+ +-.+-.++.. ..+.++=-|+=+-
T Consensus 30 ~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt---~eE~~~p~lwRfw~~lP~~G~i~IF~rSwY~~ 101 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPS---DRERTQWYFQRYVQHLPAAGEIVLFDRSWYNR 101 (230)
T ss_pred CCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC---HHHHcChHHHHHHHhCCCCCeEEEEeCchhhh
Confidence 589999999988775 45667777877899999998873 3443333 4445555543 2666666665443
No 374
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=20.19 E-value=6e+02 Score=23.42 Aligned_cols=40 Identities=20% Similarity=0.311 Sum_probs=25.6
Q ss_pred CCCCCCcEEEeCCCCCChHH-H-HHHHHHHhhCCcEEEEecC
Q 015755 36 GPKVVPPLICLPGTAGTAEV-Y-YKQIMALSMKGYRVISVDI 75 (401)
Q Consensus 36 G~~~~p~vvllHG~~~~~~~-~-~~~~~~L~~~g~~Vi~~D~ 75 (401)
|...+|+++++=|..|++.. | ..+..++.++.-+.+++++
T Consensus 14 ~~~~~p~~ilVvGMAGSGKTTF~QrL~~hl~~~~~ppYviNL 55 (366)
T KOG1532|consen 14 GAIQRPVIILVVGMAGSGKTTFMQRLNSHLHAKKTPPYVINL 55 (366)
T ss_pred ccccCCcEEEEEecCCCCchhHHHHHHHHHhhccCCCeEEeC
Confidence 44467889999999888763 3 4455666655554444443
No 375
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=20.12 E-value=5.6e+02 Score=21.94 Aligned_cols=75 Identities=16% Similarity=0.224 Sum_probs=43.8
Q ss_pred CCcEEEeCCCCCChHHH-HHHHHHHhhCCcEEEEecCCC---C-----------------CChHHHHHH------HHHHH
Q 015755 40 VPPLICLPGTAGTAEVY-YKQIMALSMKGYRVISVDIPR---V-----------------WNHHEWIQA------FEKFL 92 (401)
Q Consensus 40 ~p~vvllHG~~~~~~~~-~~~~~~L~~~g~~Vi~~D~pG---~-----------------~s~~~~a~d------l~~~l 92 (401)
++.|++++-.......+ ......+...|+.+..+...- . |+...+.+. +..++
T Consensus 29 ~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~l~~ad~I~~~GG~~~~~~~~l~~t~~~~~i~ 108 (210)
T cd03129 29 GARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLLIDTANDPDVVARLLEADGIFVGGGNQLRLLSVLRETPLLDAIL 108 (210)
T ss_pred CCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEeccCCCCCHHHHHHHhhCCEEEEcCCcHHHHHHHHHhCChHHHHH
Confidence 56788887777654433 334455655577766555431 0 333333322 22333
Q ss_pred HHhCCceEEEEEEchhHHHHHHH
Q 015755 93 DAIDVHHIHLYGTSLGGFLAQLF 115 (401)
Q Consensus 93 ~~l~~~~v~lvGhS~Gg~ia~~~ 115 (401)
+.+. +..+++|.|.|+++....
T Consensus 109 ~~~~-~G~v~~G~SAGA~~~~~~ 130 (210)
T cd03129 109 KRVA-RGVVIGGTSAGAAVMGET 130 (210)
T ss_pred HHHH-cCCeEEEcCHHHHHhhhc
Confidence 4443 568999999999988765
No 376
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=20.09 E-value=1.2e+02 Score=28.31 Aligned_cols=22 Identities=32% Similarity=0.285 Sum_probs=18.6
Q ss_pred CCceEEEEEEchhHHHHHHHHH
Q 015755 96 DVHHIHLYGTSLGGFLAQLFAQ 117 (401)
Q Consensus 96 ~~~~v~lvGhS~Gg~ia~~~A~ 117 (401)
+.++..+.|||+|=+.|+..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4778899999999999887764
No 377
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=20.01 E-value=1.4e+02 Score=21.25 Aligned_cols=25 Identities=24% Similarity=0.110 Sum_probs=19.1
Q ss_pred hCCceEEEEEEchhHHHHHHHHHhC
Q 015755 95 IDVHHIHLYGTSLGGFLAQLFAQHR 119 (401)
Q Consensus 95 l~~~~v~lvGhS~Gg~ia~~~A~~~ 119 (401)
-+.+++.++|-|-|=.+|.+.++.+
T Consensus 37 ~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 37 NGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred CCCceEEEEecCCcccHHHHHHHHh
Confidence 3557899999999999998887765
Done!