BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015759
(401 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255544624|ref|XP_002513373.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223547281|gb|EEF48776.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 442
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/371 (86%), Positives = 353/371 (95%), Gaps = 2/371 (0%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDLIGLAQTGSGKTGAFALPILQ+LLE +E ++V AFFACVLSPTRELAIQI+EQFEA
Sbjct: 46 GKDLIGLAQTGSGKTGAFALPILQSLLEASE--KSVQAFFACVLSPTRELAIQIAEQFEA 103
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAVLVGGVDM+QQ++ALGKRPHIVVATPGRL+DHL+NTKGFSL TLKYLVLD
Sbjct: 104 LGSDIGVKCAVLVGGVDMVQQSIALGKRPHIVVATPGRLVDHLSNTKGFSLRTLKYLVLD 163
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLLN+DFEKSLDEIL VIPR R+T+LFSATMTKKVKKLQRACL+NPVKIEAASKYST
Sbjct: 164 EADRLLNEDFEKSLDEILKVIPRERRTFLFSATMTKKVKKLQRACLRNPVKIEAASKYST 223
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTLKQ+YRF+PAKYKDCYLVYILTE S S++MVFTRTCDAT LAL+LRNLG RAIPI+
Sbjct: 224 VDTLKQEYRFIPAKYKDCYLVYILTEKSGSTSMVFTRTCDATTFLALVLRNLGLRAIPIN 283
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
GHM+QSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT
Sbjct: 284 GHMTQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 343
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+GVAISLVNQYE+EW++QIEKLIGKKLPE+PA EEEVLLLLE +TEAKRISQ +I
Sbjct: 344 ARAGRSGVAISLVNQYEVEWFIQIEKLIGKKLPEYPAREEEVLLLLEPITEAKRISQTSI 403
Query: 369 KDSGNKRRRKG 379
K+SG+ R+RKG
Sbjct: 404 KNSGDARKRKG 414
>gi|224096618|ref|XP_002310673.1| predicted protein [Populus trichocarpa]
gi|222853576|gb|EEE91123.1| predicted protein [Populus trichocarpa]
Length = 462
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/362 (85%), Positives = 339/362 (93%), Gaps = 2/362 (0%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDLIGLAQTGSGKTGAFALPILQALLE +Q++V FFACVLSPTRELAIQI+EQFEA
Sbjct: 63 GKDLIGLAQTGSGKTGAFALPILQALLE--SSQKSVQPFFACVLSPTRELAIQIAEQFEA 120
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI LRC VLVGGVD++QQTL L KRPHIVVATPGRL+DHL+NTKGFSL TLKYLVLD
Sbjct: 121 LGSGIGLRCGVLVGGVDIVQQTLILAKRPHIVVATPGRLLDHLSNTKGFSLRTLKYLVLD 180
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLLN++FEKSLDEILNVIPR R+TYLFSATMTKKVKKLQRACL+NPVKIEAASKYST
Sbjct: 181 EADRLLNEEFEKSLDEILNVIPRDRKTYLFSATMTKKVKKLQRACLRNPVKIEAASKYST 240
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTLKQQYRFVP+K+KDCYLVYILTE+S S+ MVFTRTCDAT LAL+LRNLG RAIPI+
Sbjct: 241 VDTLKQQYRFVPSKHKDCYLVYILTEMSNSTAMVFTRTCDATSFLALVLRNLGLRAIPIN 300
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
GHMSQ KRLGALNKFKA ECN+LICTDVASRGLDIPSVDMVINYD+P+NSKDYIHRVGRT
Sbjct: 301 GHMSQPKRLGALNKFKARECNVLICTDVASRGLDIPSVDMVINYDVPSNSKDYIHRVGRT 360
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+GVAISLVNQYELEWYLQIE LIGKKLPEFPA+EEEVL+LL+RV +AKRIS +
Sbjct: 361 ARAGRSGVAISLVNQYELEWYLQIENLIGKKLPEFPAQEEEVLMLLDRVIDAKRISHTKL 420
Query: 369 KD 370
K+
Sbjct: 421 KE 422
>gi|297797047|ref|XP_002866408.1| hypothetical protein ARALYDRAFT_919338 [Arabidopsis lyrata subsp.
lyrata]
gi|297312243|gb|EFH42667.1| hypothetical protein ARALYDRAFT_919338 [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/403 (77%), Positives = 359/403 (89%), Gaps = 8/403 (1%)
Query: 3 LWFCDAGKDLIGLAQTGSGKTGAFALPILQALLEIA------ENQRTVPAFFACVLSPTR 56
L F GKD+IGLAQTGSGKTGAFA+PILQALLE + +R PAFFACVLSPTR
Sbjct: 40 LPFALEGKDVIGLAQTGSGKTGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTR 99
Query: 57 ELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG 116
ELAIQI+EQFEALG+ ISLRCAVLVGG+D MQQT+ALGKRPH++VATPGRL DH+++TKG
Sbjct: 100 ELAIQIAEQFEALGADISLRCAVLVGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKG 159
Query: 117 FSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKN 176
FSL +LKYLVLDEADRLLN+DFEKSL++IL IPR R+T+LFSATMTKKV+KLQRACL+N
Sbjct: 160 FSLKSLKYLVLDEADRLLNEDFEKSLNQILEEIPRERKTFLFSATMTKKVRKLQRACLRN 219
Query: 177 PVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALM 236
PVKIEAASKYSTVDTLKQQYRFV AKYKDCYLVYIL+E+ S++M+FTRTCD TR LAL+
Sbjct: 220 PVKIEAASKYSTVDTLKQQYRFVAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALV 279
Query: 237 LRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPT 296
LR+LG RAIPISG M+QSKRLGALNKFKAGECNIL+CTDVASRGLDIPSVD+VINYDIPT
Sbjct: 280 LRSLGFRAIPISGQMTQSKRLGALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPT 339
Query: 297 NSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLER 356
NSKDYIHRVGRTARAGR+GV ISLVNQYELEWY+QIEKLIGKKLPE+PAEE+EVL LLER
Sbjct: 340 NSKDYIHRVGRTARAGRSGVGISLVNQYELEWYIQIEKLIGKKLPEYPAEEDEVLSLLER 399
Query: 357 VTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKKLSK 399
V EAK++S M +K+SG ++RR G++D++ R G NK + +K
Sbjct: 400 VAEAKKLSAMNMKESGGRKRR--GEDDEESERFLGGNKDRGNK 440
>gi|21593647|gb|AAM65614.1| replication protein A1-like [Arabidopsis thaliana]
Length = 456
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/405 (76%), Positives = 359/405 (88%), Gaps = 8/405 (1%)
Query: 3 LWFCDAGKDLIGLAQTGSGKTGAFALPILQALLEIA------ENQRTVPAFFACVLSPTR 56
L F GKD+IGLAQTGSGKTGAFA+PILQALLE + +R PAFFACVLSPTR
Sbjct: 40 LPFALEGKDVIGLAQTGSGKTGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTR 99
Query: 57 ELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG 116
ELAIQI+EQFEALG+ ISLRCAVL GG+D MQQT+ALGKRPH++VATPGRL DH+++TKG
Sbjct: 100 ELAIQIAEQFEALGADISLRCAVLFGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKG 159
Query: 117 FSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKN 176
FSL +LKYLVLDEADRLLN+DFEKSL++IL IPR R+T+LFSATMTKKV+KLQRACL+N
Sbjct: 160 FSLKSLKYLVLDEADRLLNEDFEKSLNQILEEIPRERKTFLFSATMTKKVRKLQRACLRN 219
Query: 177 PVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALM 236
PVKIEAASKYSTVDTLKQQYRFV AKYKDCYLVYIL+E+ S++M+FTRTCD TR LAL+
Sbjct: 220 PVKIEAASKYSTVDTLKQQYRFVAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALV 279
Query: 237 LRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPT 296
LR+LG RAIPISG M+QSKRLGALNKFKAGECNIL+CTDVASRGLDIPSVD+VINYDIPT
Sbjct: 280 LRSLGFRAIPISGQMTQSKRLGALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPT 339
Query: 297 NSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLER 356
NSKDYIHRVGRTARAGR+GV ISLVNQYELEWY+QIEKLIGKKLPE+PAEE+EVL LLER
Sbjct: 340 NSKDYIHRVGRTARAGRSGVGISLVNQYELEWYIQIEKLIGKKLPEYPAEEDEVLSLLER 399
Query: 357 VTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKKLSKRK 401
V EAK++S M +K+SG ++RR G++D++ R G NK + +K +
Sbjct: 400 VAEAKKLSAMNMKESGGRKRR--GEDDEESERFLGGNKDRGNKER 442
>gi|26450667|dbj|BAC42444.1| putative replication protein A1 [Arabidopsis thaliana]
gi|28951031|gb|AAO63439.1| At5g60990 [Arabidopsis thaliana]
Length = 456
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/405 (76%), Positives = 359/405 (88%), Gaps = 8/405 (1%)
Query: 3 LWFCDAGKDLIGLAQTGSGKTGAFALPILQALLEIA------ENQRTVPAFFACVLSPTR 56
L F GKD+IGLAQTGSGKTGAFA+PILQALLE + +R PAFFACVLSPTR
Sbjct: 40 LPFALEGKDVIGLAQTGSGKTGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTR 99
Query: 57 ELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG 116
ELAIQI+EQFEALG+ ISLRCAVLVGG+D MQQT+ALGKRPH++VATPGRL DH+++TKG
Sbjct: 100 ELAIQIAEQFEALGADISLRCAVLVGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKG 159
Query: 117 FSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKN 176
FSL +LKYLVLDEADRLLN+DFEKSL++IL IP R+T+LFSATMTKKV+KLQRACL+N
Sbjct: 160 FSLKSLKYLVLDEADRLLNEDFEKSLNQILEEIPLERETFLFSATMTKKVRKLQRACLRN 219
Query: 177 PVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALM 236
PVKIEAASKYSTVDTLKQQYRFV AKYKDCYLVYIL+E+ S++M+FTRTCD TR LAL+
Sbjct: 220 PVKIEAASKYSTVDTLKQQYRFVAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALV 279
Query: 237 LRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPT 296
LR+LG RAIPISG M+QSKRLGALNKFKAGECNIL+CTDVASRGLDIPSVD+VINYDIPT
Sbjct: 280 LRSLGFRAIPISGQMTQSKRLGALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPT 339
Query: 297 NSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLER 356
NSKDYIHRVGRTARAGR+GV ISLVNQYELEWY+QIEKLIGKKLPE+PAEE+EVL LLER
Sbjct: 340 NSKDYIHRVGRTARAGRSGVGISLVNQYELEWYIQIEKLIGKKLPEYPAEEDEVLSLLER 399
Query: 357 VTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKKLSKRK 401
V EAK++S M +K+SG ++RR G++D++ R G NK + +K +
Sbjct: 400 VAEAKKLSAMNMKESGGRKRR--GEDDEESERFLGGNKDRGNKER 442
>gi|18424420|ref|NP_568931.1| DEAD-box ATP-dependent RNA helicase 10 [Arabidopsis thaliana]
gi|108861883|sp|Q8GY84.2|RH10_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 10
gi|10177322|dbj|BAB10648.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
gi|332010025|gb|AED97408.1| DEAD-box ATP-dependent RNA helicase 10 [Arabidopsis thaliana]
Length = 456
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/405 (76%), Positives = 359/405 (88%), Gaps = 8/405 (1%)
Query: 3 LWFCDAGKDLIGLAQTGSGKTGAFALPILQALLEIA------ENQRTVPAFFACVLSPTR 56
L F GKD+IGLAQTGSGKTGAFA+PILQALLE + +R PAFFACVLSPTR
Sbjct: 40 LPFALEGKDVIGLAQTGSGKTGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTR 99
Query: 57 ELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG 116
ELAIQI+EQFEALG+ ISLRCAVLVGG+D MQQT+ALGKRPH++VATPGRL DH+++TKG
Sbjct: 100 ELAIQIAEQFEALGADISLRCAVLVGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKG 159
Query: 117 FSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKN 176
FSL +LKYLVLDEADRLLN+DFEKSL++IL IP R+T+LFSATMTKKV+KLQRACL+N
Sbjct: 160 FSLKSLKYLVLDEADRLLNEDFEKSLNQILEEIPLERKTFLFSATMTKKVRKLQRACLRN 219
Query: 177 PVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALM 236
PVKIEAASKYSTVDTLKQQYRFV AKYKDCYLVYIL+E+ S++M+FTRTCD TR LAL+
Sbjct: 220 PVKIEAASKYSTVDTLKQQYRFVAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALV 279
Query: 237 LRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPT 296
LR+LG RAIPISG M+QSKRLGALNKFKAGECNIL+CTDVASRGLDIPSVD+VINYDIPT
Sbjct: 280 LRSLGFRAIPISGQMTQSKRLGALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPT 339
Query: 297 NSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLER 356
NSKDYIHRVGRTARAGR+GV ISLVNQYELEWY+QIEKLIGKKLPE+PAEE+EVL LLER
Sbjct: 340 NSKDYIHRVGRTARAGRSGVGISLVNQYELEWYIQIEKLIGKKLPEYPAEEDEVLSLLER 399
Query: 357 VTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKKLSKRK 401
V EAK++S M +K+SG ++RR G++D++ R G NK + +K +
Sbjct: 400 VAEAKKLSAMNMKESGGRKRR--GEDDEESERFLGGNKDRGNKER 442
>gi|449456355|ref|XP_004145915.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Cucumis
sativus]
Length = 449
Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/363 (84%), Positives = 339/363 (93%), Gaps = 6/363 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDLIGLAQTGSGKTGAFALPILQALLE + AFFACVLSPTRELAIQI+EQFEA
Sbjct: 46 GKDLIGLAQTGSGKTGAFALPILQALLEAPQ------AFFACVLSPTRELAIQIAEQFEA 99
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI ++CAVLVGGVDM+QQ + L KRPH+VV TPGRL+DHLTNTKGFSL TLKYLVLD
Sbjct: 100 LGSGIGIKCAVLVGGVDMVQQAINLAKRPHVVVGTPGRLVDHLTNTKGFSLRTLKYLVLD 159
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLLN+DFEKS+DEILN IPR R+TYLFSATMTKKV+KLQRACL+NPVKIEAA+KYST
Sbjct: 160 EADRLLNEDFEKSIDEILNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYST 219
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTLKQQY F+PAKYK+CYLVYILTE+S S++MVFTRTCDATRLL+L+LRNLG RAIPIS
Sbjct: 220 VDTLKQQYCFIPAKYKECYLVYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPIS 279
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M+Q+KRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP+NSKDYIHRVGRT
Sbjct: 280 GQMTQAKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRT 339
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+GVAISLVNQYELEWY+QIEKLIGKKLP+F A+EEEVL+LLERV EAKRIS M I
Sbjct: 340 ARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLLERVAEAKRISLMKI 399
Query: 369 KDS 371
K++
Sbjct: 400 KET 402
>gi|225468923|ref|XP_002273212.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Vitis
vinifera]
Length = 470
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 332/397 (83%), Positives = 363/397 (91%), Gaps = 11/397 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDLIGLAQTGSGKTGAFALPILQALL+ T FACVLSPTRELAIQI+EQFEA
Sbjct: 80 GKDLIGLAQTGSGKTGAFALPILQALLD------TPQVLFACVLSPTRELAIQIAEQFEA 133
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI L+CAVLVGGVD QQ +AL KRPHIVV TPGRLMDHL+NTKGFSL T+KYLVLD
Sbjct: 134 LGSGIGLKCAVLVGGVDHTQQAIALAKRPHIVVGTPGRLMDHLSNTKGFSLRTMKYLVLD 193
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLLNDDFEK++DEIL+VIPR R+TYLFSATMTKKV+KLQRACL+NPVKIE ASKYST
Sbjct: 194 EADRLLNDDFEKAIDEILSVIPRERKTYLFSATMTKKVRKLQRACLRNPVKIEVASKYST 253
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTLKQQYRFVPAKYK+CYLVYILTE+S S+TMVFTRTCDATRLLAL+LRNLG RAIPIS
Sbjct: 254 VDTLKQQYRFVPAKYKECYLVYILTELSGSTTMVFTRTCDATRLLALLLRNLGLRAIPIS 313
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
GHMSQ+KRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP+NSKDYIHRVGRT
Sbjct: 314 GHMSQAKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRT 373
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+GVAISLVNQYELEWY+QIEKLIGKKLPEFPA+EEEVLLLLERVTEAKRISQM +
Sbjct: 374 ARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEFPAQEEEVLLLLERVTEAKRISQMKV 433
Query: 369 KDSGNKRRRKGGDE-DDDIGRQF----GINKKKLSKR 400
K++G K++R+GGDE +++I R G + KKL KR
Sbjct: 434 KETGGKKKRRGGDEGEEEIDRYLASKNGKSSKKLKKR 470
>gi|359473682|ref|XP_003631346.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
10-like [Vitis vinifera]
Length = 436
Score = 622 bits (1604), Expect = e-176, Method: Compositional matrix adjust.
Identities = 328/397 (82%), Positives = 359/397 (90%), Gaps = 11/397 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDLIGLAQTGSGKTGAFALPILQALL+ T FACVLSPTRELAIQI+EQFEA
Sbjct: 46 GKDLIGLAQTGSGKTGAFALPILQALLD------TPQVLFACVLSPTRELAIQIAEQFEA 99
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI L+CAVLVGGVD QQ +AL KRPHIVV T G LMDHL+NTKGFSL T+KYLVLD
Sbjct: 100 LGSGIGLKCAVLVGGVDHTQQAIALAKRPHIVVGTLGXLMDHLSNTKGFSLRTMKYLVLD 159
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLLNDDFEK++DEIL+VIP+ R+TYLFSATMTKKV+KLQRACL+NPVKIEA SKYST
Sbjct: 160 EADRLLNDDFEKAIDEILSVIPQERKTYLFSATMTKKVRKLQRACLRNPVKIEAGSKYST 219
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTLKQQYRFVPAKYK+CYLVYILTE+S S+TMVFTRTCDATRLLAL+LRNLG AIPIS
Sbjct: 220 VDTLKQQYRFVPAKYKECYLVYILTELSGSTTMVFTRTCDATRLLALLLRNLGLGAIPIS 279
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
GHMSQ+KRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP+NSKDYIHRVGRT
Sbjct: 280 GHMSQTKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRT 339
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
A AGR+GVAISLVNQYELEWY+QIEKLIGKKLPEFPA+EEEVLLLLERVTEAKRISQM I
Sbjct: 340 AHAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEFPAQEEEVLLLLERVTEAKRISQMKI 399
Query: 369 KDSGNKRRRKGGDE-DDDIGRQF----GINKKKLSKR 400
K++G K++R+GGDE +++I R G + KKL KR
Sbjct: 400 KETGGKKKRRGGDEGEEEIDRYLASKNGKSSKKLKKR 436
>gi|357505249|ref|XP_003622913.1| ATP-dependent RNA helicase dbp9 [Medicago truncatula]
gi|355497928|gb|AES79131.1| ATP-dependent RNA helicase dbp9 [Medicago truncatula]
Length = 1155
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 300/394 (76%), Positives = 350/394 (88%), Gaps = 6/394 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDLIGLA+TGSGKTGAFALPIL ALLE FFACV+SPTRELAIQISEQFEA
Sbjct: 763 GKDLIGLAKTGSGKTGAFALPILHALLEAPRPNH----FFACVMSPTRELAIQISEQFEA 818
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAVLVGG+DM+QQ++ + K PHI+V TPGR++DHL NTKGFSL LKYLVLD
Sbjct: 819 LGSEIGVKCAVLVGGIDMVQQSVKIAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLD 878
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLLN+DFE+SL+EIL +IPR R+T+LFSATMT KV+KLQR CL+NPVKIE +SKYST
Sbjct: 879 EADRLLNEDFEESLNEILGMIPRERRTFLFSATMTNKVEKLQRVCLRNPVKIETSSKYST 938
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTLKQQYRF+PAK+KDCYLVYIL+E++ S++MVFTRTCD+TRLLAL+LRNLG +AIPI+
Sbjct: 939 VDTLKQQYRFLPAKHKDCYLVYILSEMAGSTSMVFTRTCDSTRLLALILRNLGLKAIPIN 998
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
GHMSQ KRLGALNKFK+G+CNIL+CTDVASRGLDIP+VDMVINYDIPTNSKDYIHRVGRT
Sbjct: 999 GHMSQPKRLGALNKFKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRT 1058
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+GVAISLVNQYELEWY+QIEKLIGKKLPE+PA EEEVLLL ERV EAKR++ +
Sbjct: 1059 ARAGRSGVAISLVNQYELEWYVQIEKLIGKKLPEYPANEEEVLLLEERVGEAKRLAATKM 1118
Query: 369 KDSGNKRRRKGGD--EDDDIGRQFGINKKKLSKR 400
K+SG K+RR GD E+DD+ + FG+ +K SK+
Sbjct: 1119 KESGGKKRRGEGDIGEEDDVDKYFGLKDRKSSKK 1152
>gi|84468282|dbj|BAE71224.1| putative replication protein A1 [Trifolium pratense]
Length = 440
Score = 616 bits (1588), Expect = e-174, Method: Compositional matrix adjust.
Identities = 303/395 (76%), Positives = 355/395 (89%), Gaps = 7/395 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKTGAFALPIL ALL+ FFACVLSPTRELAIQISEQFEA
Sbjct: 46 GKDVIGLAQTGSGKTGAFALPILHALLQAPRPNH----FFACVLSPTRELAIQISEQFEA 101
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI ++ AVLVGG+DM+QQ++ + K PHI+V TPGR++DHL NTKGFSL LKYLVLD
Sbjct: 102 LGSGIGVKSAVLVGGIDMVQQSIKIAKHPHIIVGTPGRVLDHLKNTKGFSLSKLKYLVLD 161
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLLN+DFE+SL+EIL +IPR R+T+LFSATMTKKV+KLQR CL+NPVKIEA++KYST
Sbjct: 162 EADRLLNEDFEESLNEILGMIPRERRTFLFSATMTKKVEKLQRVCLRNPVKIEASTKYST 221
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTLKQQYRF+PAK KDCYLVYILTE++ S++MVFTRTCDATRLLAL+LRNLG +AIPI+
Sbjct: 222 VDTLKQQYRFLPAKRKDCYLVYILTEMAGSTSMVFTRTCDATRLLALILRNLGLKAIPIN 281
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
GHMSQ KRLGALNKFK+G+CNIL+CTDVASRGLDIP+VDMVINYDIPTNSKDYIHRVGRT
Sbjct: 282 GHMSQPKRLGALNKFKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRT 341
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+GVAISLVNQYELEWY+QIEKLIGKKLPE+PA+EEEVLLL ERV+EAKR++ +
Sbjct: 342 ARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEYPAQEEEVLLLEERVSEAKRLAATKM 401
Query: 369 KDSGNKRRRKG-GD--EDDDIGRQFGINKKKLSKR 400
K+SG K++R+G GD +D+DI + FG+ +K SK+
Sbjct: 402 KESGGKKKRRGEGDSGDDEDIDKYFGLKDRKSSKK 436
>gi|356504849|ref|XP_003521207.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Glycine
max]
Length = 439
Score = 615 bits (1587), Expect = e-174, Method: Compositional matrix adjust.
Identities = 302/394 (76%), Positives = 356/394 (90%), Gaps = 6/394 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKTGAFALPIL ALLE + FFACVLSPTRELAIQI+EQFEA
Sbjct: 46 GKDVIGLAQTGSGKTGAFALPILHALLEAPRPK----DFFACVLSPTRELAIQIAEQFEA 101
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAVLVGG+DM+QQ++ + K+PHI+V TPGR++DHL +TKGFSL LKYLVLD
Sbjct: 102 LGSEIGVKCAVLVGGIDMVQQSIKIAKQPHIIVGTPGRVIDHLKHTKGFSLSRLKYLVLD 161
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLLN+DFE+SL+EIL +IPR R+T+LFSATMTKKV+KLQR CL+NPVKIEA+SKYST
Sbjct: 162 EADRLLNEDFEESLNEILQMIPRERRTFLFSATMTKKVQKLQRVCLRNPVKIEASSKYST 221
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTLKQQYRF+PAK+KDCYLVYILTE++ S++MVFTRTCDATRLLAL+LRNLG +AIPI+
Sbjct: 222 VDTLKQQYRFLPAKHKDCYLVYILTEMAGSTSMVFTRTCDATRLLALILRNLGLKAIPIN 281
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
GHMSQSKRLGALNKFK+GECNIL+CTDVASRGLDIP+VDMVINYDIPTNSKDYIHRVGRT
Sbjct: 282 GHMSQSKRLGALNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRT 341
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+GVAISLVNQYELEWY+QIEKLIGKKLPE+PA+EEEVLLL ERV EAKR++ M +
Sbjct: 342 ARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEYPAQEEEVLLLEERVGEAKRLAVMKM 401
Query: 369 KDSGNKRRRKGGDEDD--DIGRQFGINKKKLSKR 400
K++G K++R+G ++ D DI + G+ + K SK+
Sbjct: 402 KETGGKKKRRGEEDYDGEDIDKYLGLKEGKSSKK 435
>gi|224089124|ref|XP_002308641.1| predicted protein [Populus trichocarpa]
gi|222854617|gb|EEE92164.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 603 bits (1554), Expect = e-170, Method: Compositional matrix adjust.
Identities = 298/393 (75%), Positives = 337/393 (85%), Gaps = 7/393 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDLI LAQTGSGKT AFALP LQALL+ + +VP F+ACVLSPTRELAIQI+EQFEA
Sbjct: 47 GKDLIALAQTGSGKTAAFALPTLQALLQASVT--SVPVFYACVLSPTRELAIQIAEQFEA 104
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I LRCAVLVGGVDM QT+AL KRPHIVV TPGRL+DHL+NTKGFSL TLKYL+LD
Sbjct: 105 LGSDIGLRCAVLVGGVDMGLQTIALAKRPHIVVGTPGRLLDHLSNTKGFSLRTLKYLILD 164
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLLN++FEKSLDEIL VI R R+TYLFSATMTKKV+KLQRACL+NPVKIE ASKYS
Sbjct: 165 EADRLLNEEFEKSLDEILTVISRDRKTYLFSATMTKKVRKLQRACLRNPVKIEVASKYSV 224
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+TL+QQ F PAKYK+CYLV+ LT S +STMVFTRTCDAT LAL+LRNLG RAIPI+
Sbjct: 225 VETLRQQLLFCPAKYKECYLVHALTLKSGASTMVFTRTCDATHFLALVLRNLGLRAIPIN 284
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMV+NYDIPTNSKDYIHRVGRT
Sbjct: 285 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVVNYDIPTNSKDYIHRVGRT 344
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G+AISLVNQ E+ W+ QIE LIG ++ + +EE++LLLERVTEAKRISQ I
Sbjct: 345 ARAGRSGLAISLVNQNEIGWFKQIENLIGIRMSDIRPHQEEIMLLLERVTEAKRISQKQI 404
Query: 369 KDSGNKRRRKGGDEDDD-----IGRQFGINKKK 396
K+ G K+R+ GDED++ I ++ G KKK
Sbjct: 405 KEPGGKKRKGRGDEDEEEIDKYISKKDGRFKKK 437
>gi|357500169|ref|XP_003620373.1| ATP-dependent RNA helicase [Medicago truncatula]
gi|355495388|gb|AES76591.1| ATP-dependent RNA helicase [Medicago truncatula]
Length = 502
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 301/394 (76%), Positives = 349/394 (88%), Gaps = 6/394 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDLIGLA+TGSGKTGAFALPIL ALLE FFACV+SPTRELAIQISEQFEA
Sbjct: 110 GKDLIGLAETGSGKTGAFALPILHALLEAPRPNH----FFACVMSPTRELAIQISEQFEA 165
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAVLVGG+DM+QQ++ + K PHI+V TPGR++DHL NTKGFSL LKYLVLD
Sbjct: 166 LGSEIGVKCAVLVGGIDMVQQSVKIAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLD 225
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLLN+DFE+SL+EIL +IPR R+T+LFSATMTKKV+KLQR CL+NPVKIE +SKYST
Sbjct: 226 EADRLLNEDFEESLNEILGMIPRERRTFLFSATMTKKVEKLQRVCLRNPVKIETSSKYST 285
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTLKQQYRF+PAK+KDCYLVYILTE++ S++MVFTRTCD+TRLLAL+LRNLG +AIPI+
Sbjct: 286 VDTLKQQYRFLPAKHKDCYLVYILTEMAGSTSMVFTRTCDSTRLLALILRNLGLKAIPIN 345
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
GHMSQ KRLGALNKFK+G+CNIL+CTDVASRGLDIP+VDMVINYDIPTNSKDYIHRVGRT
Sbjct: 346 GHMSQPKRLGALNKFKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRT 405
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+GVAISLVNQYELEWY+QIEKLIGKKLPE+PA EEEVLLL ERV EAKR++ +
Sbjct: 406 ARAGRSGVAISLVNQYELEWYVQIEKLIGKKLPEYPANEEEVLLLEERVGEAKRLAATKM 465
Query: 369 KDSGNKRRR--KGGDEDDDIGRQFGINKKKLSKR 400
K+SG K+RR EDDD+ + FG+ +K SK+
Sbjct: 466 KESGGKKRRGEGDVGEDDDVDKYFGLKDRKSSKK 499
>gi|357500171|ref|XP_003620374.1| ATP-dependent RNA helicase [Medicago truncatula]
gi|355495389|gb|AES76592.1| ATP-dependent RNA helicase [Medicago truncatula]
Length = 431
Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust.
Identities = 301/394 (76%), Positives = 349/394 (88%), Gaps = 6/394 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDLIGLA+TGSGKTGAFALPIL ALLE FFACV+SPTRELAIQISEQFEA
Sbjct: 39 GKDLIGLAETGSGKTGAFALPILHALLEAPRPNH----FFACVMSPTRELAIQISEQFEA 94
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAVLVGG+DM+QQ++ + K PHI+V TPGR++DHL NTKGFSL LKYLVLD
Sbjct: 95 LGSEIGVKCAVLVGGIDMVQQSVKIAKLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLD 154
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLLN+DFE+SL+EIL +IPR R+T+LFSATMTKKV+KLQR CL+NPVKIE +SKYST
Sbjct: 155 EADRLLNEDFEESLNEILGMIPRERRTFLFSATMTKKVEKLQRVCLRNPVKIETSSKYST 214
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTLKQQYRF+PAK+KDCYLVYILTE++ S++MVFTRTCD+TRLLAL+LRNLG +AIPI+
Sbjct: 215 VDTLKQQYRFLPAKHKDCYLVYILTEMAGSTSMVFTRTCDSTRLLALILRNLGLKAIPIN 274
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
GHMSQ KRLGALNKFK+G+CNIL+CTDVASRGLDIP+VDMVINYDIPTNSKDYIHRVGRT
Sbjct: 275 GHMSQPKRLGALNKFKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRT 334
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+GVAISLVNQYELEWY+QIEKLIGKKLPE+PA EEEVLLL ERV EAKR++ +
Sbjct: 335 ARAGRSGVAISLVNQYELEWYVQIEKLIGKKLPEYPANEEEVLLLEERVGEAKRLAATKM 394
Query: 369 KDSGNKRRR--KGGDEDDDIGRQFGINKKKLSKR 400
K+SG K+RR EDDD+ + FG+ +K SK+
Sbjct: 395 KESGGKKRRGEGDVGEDDDVDKYFGLKDRKSSKK 428
>gi|3775997|emb|CAA09201.1| RNA helicase [Arabidopsis thaliana]
Length = 376
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 283/363 (77%), Positives = 329/363 (90%), Gaps = 2/363 (0%)
Query: 39 ENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPH 98
+ +R PAFFACVLSPTRELAIQI+EQFEALG+ ISLRCAVLVGG+D MQQT+ALGKRPH
Sbjct: 2 KGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDRMQQTIALGKRPH 61
Query: 99 IVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLF 158
++VATPGRL DH+++TKGFSL +LKYLVLDEADRLLN+DFEKSL++IL IP R+T+LF
Sbjct: 62 VIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILEEIPLERKTFLF 121
Query: 159 SATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSAS 218
SATMTKKV+KLQRACL+NPVKIEAASKYSTVDTLKQQYRFV AKYKDCYLVYIL+E+ S
Sbjct: 122 SATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVAAKYKDCYLVYILSEMPES 181
Query: 219 STMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVAS 278
++M+FTRTCD TR LAL+LR+LG RAIPISG M+QSKRLGALNKFKAGECNIL+CTDVAS
Sbjct: 182 TSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFKAGECNILVCTDVAS 241
Query: 279 RGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGK 338
RGLDIPSVD+VINYDIPTNSKDYIHRVGRTARAGR+GV ISLVNQYELEWY+QIEKLIGK
Sbjct: 242 RGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQYELEWYIQIEKLIGK 301
Query: 339 KLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKKLS 398
KLPE+PAEE+EVL LLERV EAK++S M +K+SG ++RR G++D++ R G NK + +
Sbjct: 302 KLPEYPAEEDEVLSLLERVAEAKKLSAMNMKESGGRKRR--GEDDEESERFLGGNKDRGN 359
Query: 399 KRK 401
K +
Sbjct: 360 KER 362
>gi|356520446|ref|XP_003528873.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
10-like [Glycine max]
Length = 438
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 294/394 (74%), Positives = 347/394 (88%), Gaps = 6/394 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+ GLAQTG GKTGAFALPIL ALLE + FF CVLSPTRELAIQI+EQFEA
Sbjct: 46 GKDVTGLAQTGYGKTGAFALPILHALLEAPRPKH----FFDCVLSPTRELAIQIAEQFEA 101
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAVLVGG+DM+QQ++ + K+PHI+V TP R++DHL +TKGFSLG LKYLVLD
Sbjct: 102 LGSXIGVKCAVLVGGIDMVQQSIKIAKQPHIIVGTPRRVLDHLKHTKGFSLGRLKYLVLD 161
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLLN+DFE+SL+EIL +IPR R+T+LFSATMTKKV+KLQR CL+NPVKIEA+SKYST
Sbjct: 162 EADRLLNEDFEESLNEILQMIPRERKTFLFSATMTKKVQKLQRVCLRNPVKIEASSKYST 221
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTLKQQY F+PAK+KDCY VYILTE+S S++MVFT TCDATRLLAL+LRNLG +AIPI+
Sbjct: 222 VDTLKQQYLFLPAKHKDCYFVYILTEMSGSTSMVFTCTCDATRLLALILRNLGLKAIPIN 281
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
GHMSQSKRLGA NKFK+GECNIL+CTDVASRGLDIP+VDMVINYDIPTNSKDYIHRVGRT
Sbjct: 282 GHMSQSKRLGASNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRT 341
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR GVAISLVNQYEL WY+QIEKLIG KLPE+PA+EEEVLLL ERV+EAKR++ M +
Sbjct: 342 ARAGRFGVAISLVNQYELGWYIQIEKLIGNKLPEYPAQEEEVLLLEERVSEAKRLAVMKM 401
Query: 369 KDSGNKRRRKGGDEDD--DIGRQFGINKKKLSKR 400
K++G K++R+G ++ D DI + G+ + K SK+
Sbjct: 402 KETGGKKKRRGEEDYDGEDIDKYLGLKEGKSSKK 435
>gi|168009544|ref|XP_001757465.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691159|gb|EDQ77522.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 452
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 274/370 (74%), Positives = 322/370 (87%), Gaps = 6/370 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLAQTGSGKT FALPILQALLE + FACVLSPTRELAIQI+EQFEA
Sbjct: 56 GHDIIGLAQTGSGKTATFALPILQALLENPQ------PLFACVLSPTRELAIQIAEQFEA 109
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI L+CAVLVGG+DMM Q++AL KRPH+VV TPGRL+DHLTNTKGFSL T+KYLVLD
Sbjct: 110 LGSGIGLKCAVLVGGIDMMAQSVALAKRPHVVVGTPGRLVDHLTNTKGFSLRTIKYLVLD 169
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLLN DFE+ +DEIL VIP+ R+TYLFSATMT KV KLQRACLKNPVK+E ++KYST
Sbjct: 170 EADRLLNMDFEQEIDEILKVIPKERRTYLFSATMTTKVAKLQRACLKNPVKVEVSAKYST 229
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD+LKQ+Y F+PAKYKDCYLVYIL E++ ++ MVFTRTC+ATR L+L+LRNLG AIPIS
Sbjct: 230 VDSLKQEYLFIPAKYKDCYLVYILNELAGNTAMVFTRTCEATRKLSLVLRNLGFVAIPIS 289
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ KRLGAL KFKAG+CNILICTDVASRGLDIPSV++VINYDIPTNSKDYIHRVGRT
Sbjct: 290 GQMSQPKRLGALAKFKAGDCNILICTDVASRGLDIPSVNLVINYDIPTNSKDYIHRVGRT 349
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AIS+V QY++E Y +IE+LIGKKLPEF ++EEVLL+LERV+EA+R++ M +
Sbjct: 350 ARAGRSGRAISMVCQYDVELYQKIEELIGKKLPEFSHQQEEVLLMLERVSEAQRLATMHM 409
Query: 369 KDSGNKRRRK 378
++ ++ K
Sbjct: 410 REKDGAKKGK 419
>gi|242042443|ref|XP_002468616.1| hypothetical protein SORBIDRAFT_01g049070 [Sorghum bicolor]
gi|241922470|gb|EER95614.1| hypothetical protein SORBIDRAFT_01g049070 [Sorghum bicolor]
Length = 454
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 266/379 (70%), Positives = 322/379 (84%), Gaps = 4/379 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDLI LAQTGSGKTGAFALPILQ LL N++ +FFACVLSPTRELAIQI+EQFEA
Sbjct: 61 GKDLIALAQTGSGKTGAFALPILQELLS---NRQAEQSFFACVLSPTRELAIQIAEQFEA 117
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I LRC+VLVGGVD +QQ L++GKRPHIVV TPGRL+DHLT TKGFSL +KYLVLD
Sbjct: 118 LGSAIGLRCSVLVGGVDRVQQVLSIGKRPHIVVGTPGRLLDHLTETKGFSLKKIKYLVLD 177
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD+LLN +FEKSLD+IL IP+ R+T+LFSATMTKKV KLQRACL+NP K+EAASKYST
Sbjct: 178 EADKLLNVEFEKSLDDILREIPKDRRTFLFSATMTKKVNKLQRACLRNPAKVEAASKYST 237
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD+LKQ++ FVPA KDCYL+++L E S M+F RTC++TRLLALMLRNLG +A+ IS
Sbjct: 238 VDSLKQEFYFVPADDKDCYLLHVLNERQDSMIMIFVRTCESTRLLALMLRNLGLKAMSIS 297
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ KRLGALN+FKA +CNILICTDVASRGLDI VDMVINYDIP NSKDY+HRVGRT
Sbjct: 298 GQMSQDKRLGALNRFKAKDCNILICTDVASRGLDIQGVDMVINYDIPMNSKDYVHRVGRT 357
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G A+SLVNQYE +W++ IEKL+GK++ + + +EV++L +++AKRI+ +
Sbjct: 358 ARAGRSGYAVSLVNQYEAQWFVLIEKLLGKQIDQRKVDRDEVMILKGPISDAKRIALTKL 417
Query: 369 KDS-GNKRRRKGGDEDDDI 386
KDS G+K+RRK GD+D+++
Sbjct: 418 KDSGGHKKRRKAGDDDEEV 436
>gi|212722850|ref|NP_001131651.1| uncharacterized protein LOC100193011 [Zea mays]
gi|194692160|gb|ACF80164.1| unknown [Zea mays]
gi|413934956|gb|AFW69507.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 455
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 263/379 (69%), Positives = 321/379 (84%), Gaps = 4/379 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDLI LAQTGSGKTGAFALPILQ LL N++ +FFACVLSPTRELAIQI+EQFEA
Sbjct: 61 GKDLIALAQTGSGKTGAFALPILQELLS---NRQAEQSFFACVLSPTRELAIQIAEQFEA 117
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I LRC+VLVGGVD +QQ L++GKRPHIVV TPGRL+DHLT TKGFSL +KYLVLD
Sbjct: 118 LGSAIGLRCSVLVGGVDRVQQVLSIGKRPHIVVGTPGRLLDHLTETKGFSLKKIKYLVLD 177
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD+LLN +FEKSLD+IL+ +P+ R+T+LFSATMTKKV KLQRACL+NP K+E +SKYST
Sbjct: 178 EADKLLNVEFEKSLDDILSEMPKDRRTFLFSATMTKKVNKLQRACLRNPAKVEVSSKYST 237
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD+LKQ++ FVPA KDCYL+++L E S M+F RTC++TRLLALMLRNLG +A+ IS
Sbjct: 238 VDSLKQEFYFVPADDKDCYLLHVLNERLESMIMIFVRTCESTRLLALMLRNLGLKAMSIS 297
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ KRLGALN+FKA +CNILICTDVASRGLDI VDMVINYDIP NSKDY+HRVGRT
Sbjct: 298 GQMSQDKRLGALNRFKAKDCNILICTDVASRGLDIQGVDMVINYDIPMNSKDYVHRVGRT 357
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G A+SLVNQYE +W++ IE+L+GKK+ + + +EVL+L +++AKRI+ +
Sbjct: 358 ARAGRSGYAVSLVNQYEAQWFVLIEQLLGKKIDQCKVDRDEVLILKGPISDAKRIALTKL 417
Query: 369 KDS-GNKRRRKGGDEDDDI 386
KDS G+K+RR GD+D+++
Sbjct: 418 KDSGGHKKRRNVGDDDEEV 436
>gi|195621064|gb|ACG32362.1| ATP-dependent RNA helicase DDX47 [Zea mays]
Length = 455
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 263/379 (69%), Positives = 321/379 (84%), Gaps = 4/379 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDLI LAQTGSGKTGAFALPILQ LL N++ +FFACVLSPTRELAIQI+EQFEA
Sbjct: 61 GKDLIALAQTGSGKTGAFALPILQELLS---NRQAEQSFFACVLSPTRELAIQIAEQFEA 117
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I LRC+VLVGGVD +QQ L++GKRPHIVV TPGRL+DHLT TKGFSL +KYLVLD
Sbjct: 118 LGSAIGLRCSVLVGGVDRVQQVLSIGKRPHIVVGTPGRLLDHLTETKGFSLKKIKYLVLD 177
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD+LLN +FEKSLD+IL+ +P+ R+T+LFSATMTKKV KLQRACL+NP K+E +SKYST
Sbjct: 178 EADKLLNVEFEKSLDDILSEMPKDRRTFLFSATMTKKVNKLQRACLRNPAKVEVSSKYST 237
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD+LKQ++ FVPA KDCYL+++L E S M+F RTC++TRLLALMLRNLG +A+ IS
Sbjct: 238 VDSLKQEFYFVPADDKDCYLLHVLNERLESMIMIFVRTCESTRLLALMLRNLGLKAMSIS 297
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ KRLGALN+FKA +CNILICTDVASRGLDI VDMVINYDIP NSKDY+HRVGRT
Sbjct: 298 GQMSQDKRLGALNRFKAKDCNILICTDVASRGLDIQGVDMVINYDIPINSKDYVHRVGRT 357
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G A+SLVNQYE +W++ IE+L+GKK+ + + +EVL+L +++AKRI+ +
Sbjct: 358 ARAGRSGYAVSLVNQYEAQWFVLIEQLLGKKIDQCKVDRDEVLILKGPISDAKRIALTKL 417
Query: 369 KDS-GNKRRRKGGDEDDDI 386
KDS G+K+RR GD+D+++
Sbjct: 418 KDSGGHKKRRNVGDDDEEV 436
>gi|302823844|ref|XP_002993570.1| hypothetical protein SELMODRAFT_270055 [Selaginella moellendorffii]
gi|300138582|gb|EFJ05345.1| hypothetical protein SELMODRAFT_270055 [Selaginella moellendorffii]
Length = 434
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 271/396 (68%), Positives = 327/396 (82%), Gaps = 9/396 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLAQTGSGKT AFALPILQAL Q+ P FFACVLSPTRELAIQISEQFEA
Sbjct: 45 GRDLIGLAQTGSGKTAAFALPILQALF-----QQCHP-FFACVLSPTRELAIQISEQFEA 98
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I +R +VGGV M+ Q +ALGK PHIVVATPGRL+DHLTNTKGFSL +KYLVLD
Sbjct: 99 LGSQIGVRSVAIVGGVSMVDQAVALGKNPHIVVATPGRLLDHLTNTKGFSLRNVKYLVLD 158
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD++L++DFEK +DEIL V+PR R+T+LFSATMT KV KLQRACL+NP K+E +SKY+T
Sbjct: 159 EADKILHNDFEKEVDEILKVVPRERKTFLFSATMTNKVAKLQRACLRNPTKVEVSSKYTT 218
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
TLKQ+Y FVPAK+KDCY V++L E++ S+ MVFTRTCD+TR LAL+LR+LG AIPIS
Sbjct: 219 ALTLKQEYVFVPAKHKDCYFVFLLNEMAGSTAMVFTRTCDSTRRLALILRSLGFGAIPIS 278
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKR GAL KFKAG+ N+LICTDVASRGLDIPSVD+VINYDIPTNSKDYIHRVGRT
Sbjct: 279 GQMSQSKRSGALLKFKAGDRNLLICTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRT 338
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AIS+V QY+++ Y +IE LIG LPEFPA+ +EVLLL ERV+EA+R++ M I
Sbjct: 339 ARAGRSGRAISIVTQYDVDLYKRIEDLIGMTLPEFPAKADEVLLLEERVSEAQRLAAMHI 398
Query: 369 KD---SGNKRRRKGGDEDDDIGRQFGINKKKLSKRK 401
++ S ++R+ GD+D+ + K+K SK++
Sbjct: 399 REKDASKKSKKRRNGDDDEADDGGYMAGKRKQSKKR 434
>gi|303283774|ref|XP_003061178.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457529|gb|EEH54828.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 456
Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust.
Identities = 262/374 (70%), Positives = 309/374 (82%), Gaps = 11/374 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKTGAFALPILQ LL+ + AFFA VLSPTRELAIQISEQFEA
Sbjct: 52 GKDVIGLAQTGSGKTGAFALPILQELLDKPQ------AFFALVLSPTRELAIQISEQFEA 105
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+GI ++CAVLVGGVDMM Q++ LGKRPH+VV TPGR++DHLTNTKGF L L+ L LD
Sbjct: 106 LGAGIGVKCAVLVGGVDMMAQSIQLGKRPHVVVGTPGRVVDHLTNTKGFGLKQLQVLCLD 165
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLLN DFE+ +D+IL VIPR R+T LFSATMT KV KLQRACL+NPVK+E ++KYST
Sbjct: 166 EADRLLNLDFEQEIDQILKVIPRDRRTQLFSATMTSKVAKLQRACLRNPVKVEVSAKYST 225
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V +LKQQY FVPAK+KDCY Y+ E+SAS+ MVFTRTCD TR LAL+ RNLG AIPI
Sbjct: 226 VASLKQQYLFVPAKHKDCYACYLFNELSASTMMVFTRTCDQTRKLALVARNLGFGAIPIH 285
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ KRLGALNKFKAGE N+L+ TDVASRGLDIP+VD+VIN+D+P NSKDY+HRVGRT
Sbjct: 286 GQMSQPKRLGALNKFKAGERNVLVATDVASRGLDIPAVDVVINFDVPQNSKDYVHRVGRT 345
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G+AI+LV QY++E Y +IE+LI KKL +PA EE VLL+ ERV EA+RI+ I
Sbjct: 346 ARAGRSGLAITLVTQYDVELYQKIERLINKKLDAYPAPEEAVLLMHERVNEAQRIALQQI 405
Query: 369 KDS-----GNKRRR 377
+++ G KR R
Sbjct: 406 READEKGGGKKRNR 419
>gi|255079166|ref|XP_002503163.1| dead-box ATP-dependent RNA helicase [Micromonas sp. RCC299]
gi|226518429|gb|ACO64421.1| dead-box ATP-dependent RNA helicase [Micromonas sp. RCC299]
Length = 450
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 257/381 (67%), Positives = 316/381 (82%), Gaps = 10/381 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKTGAFALPILQ LL+ + AFFA VLSPTRELAIQI+EQFEA
Sbjct: 52 GKDVIGLAQTGSGKTGAFALPILQELLDKPQ------AFFALVLSPTRELAIQIAEQFEA 105
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+GI ++ AVLVGG+DMM Q++ LGKRPH+VV TPGR++DHLTNTKGF+L L+ L LD
Sbjct: 106 LGAGIGVKTAVLVGGIDMMAQSIQLGKRPHVVVGTPGRVVDHLTNTKGFTLKQLQVLCLD 165
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLLN DFE+ +D+IL V+PR R+T LFSATMT KV KLQRACL+NPVK+E ++KYST
Sbjct: 166 EADRLLNLDFEQEIDQILKVVPRDRRTQLFSATMTSKVAKLQRACLRNPVKVEVSAKYST 225
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD+LKQ Y F+PAK+KDCY+ Y+ E+S+S+ MVFTRTCD TR LAL+ RNLG AIPI
Sbjct: 226 VDSLKQNYLFIPAKHKDCYVNYLFNELSSSTMMVFTRTCDQTRKLALVARNLGFGAIPIH 285
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ KR+GALNKFKAGE NIL+ TDVASRGLDIP+VD+VINYD+P NSKDY+HRVGRT
Sbjct: 286 GQMSQPKRIGALNKFKAGERNILVATDVASRGLDIPAVDVVINYDVPQNSKDYVHRVGRT 345
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G+AI++V QY++E Y +IE+LI KKL + A EE VLL+ ERV EA+RI+Q +
Sbjct: 346 ARAGRSGLAITMVTQYDVELYQKIERLIQKKLDAYDAPEEAVLLMNERVNEAQRIAQQQM 405
Query: 369 KDS----GNKRRRKGGDEDDD 385
+++ G K+R + GD ++D
Sbjct: 406 READAKGGGKKRNRDGDGEED 426
>gi|357116154|ref|XP_003559848.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like
[Brachypodium distachyon]
Length = 449
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 261/380 (68%), Positives = 314/380 (82%), Gaps = 9/380 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGL QTGSGKTGAFALPI+QALLE ++R FFACV+SPTRELAIQI+EQFEA
Sbjct: 55 GRDLIGLGQTGSGKTGAFALPIIQALLE---HRR---PFFACVMSPTRELAIQIAEQFEA 108
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I L C+VLVGGVD MQQ L++ KRPHIVV TPGRL+DHL +TKGFSL +KYLVLD
Sbjct: 109 LGSAIGLVCSVLVGGVDRMQQVLSIAKRPHIVVGTPGRLLDHLKDTKGFSLNKVKYLVLD 168
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD+LLN +F++SLD+IL IP+ R+TYLFSATMTKKV KLQRACL+NP K+E +SKYST
Sbjct: 169 EADKLLNLEFKESLDDILKAIPKERRTYLFSATMTKKVSKLQRACLRNPAKVEVSSKYST 228
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTLKQ++ FVPA YKDCYLV+ L E+ S M+F RTC++TRLLAL LRNLG +A+ IS
Sbjct: 229 VDTLKQEWYFVPAAYKDCYLVHALNELPGSMIMIFVRTCESTRLLALTLRNLGFKALSIS 288
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ KRLGALNKFKA + NILICTDVASRGLDI VD VINYDIP NSKDYIHRVGRT
Sbjct: 289 GQMSQDKRLGALNKFKAKDFNILICTDVASRGLDIQGVDAVINYDIPMNSKDYIHRVGRT 348
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPE-FPAEEEEVLLLLERVTEAKRISQMT 367
ARAG++G A+SLVNQYE EW+ IE L+GKK+ + + +E+++L E +++++RI+
Sbjct: 349 ARAGKSGYAVSLVNQYETEWFKMIEALLGKKIGDPRKVDADEIMILREHISDSRRIALTK 408
Query: 368 IKDSGN--KRRRKGGDEDDD 385
+K+ G KRRRKG D+DDD
Sbjct: 409 LKEDGGSKKRRRKGNDDDDD 428
>gi|326504546|dbj|BAJ91105.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508600|dbj|BAJ95822.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 456
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 254/371 (68%), Positives = 312/371 (84%), Gaps = 7/371 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGL QTGSGKTGAFALPI+QALLE + FFACV+SPTRELAIQI+EQFEA
Sbjct: 63 GRDVIGLGQTGSGKTGAFALPIIQALLEHRQ------PFFACVMSPTRELAIQIAEQFEA 116
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI L C+VLVGGVD MQQ L++ KRPHIVV TPGRL+DHL +TKGFSL +KYLVLD
Sbjct: 117 LGSGIGLVCSVLVGGVDRMQQVLSIAKRPHIVVGTPGRLLDHLKDTKGFSLTKVKYLVLD 176
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD+LLN +F++SLD+IL IP+ R+TYLFSATMTKKV KLQRACL+NPVK+E +SKYST
Sbjct: 177 EADKLLNLEFKESLDDILKEIPKERRTYLFSATMTKKVSKLQRACLRNPVKVEVSSKYST 236
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTLKQ++ FVPA YKDCYLV++L E+ S M+F RTC++TRLLAL LRNLG +A+ IS
Sbjct: 237 VDTLKQEWYFVPADYKDCYLVHVLNELQGSMIMIFVRTCESTRLLALTLRNLGFKALSIS 296
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ KRLGALNKFKA + NILICTDVASRGLDI VD+V+NYDIP NSKDY+HRVGRT
Sbjct: 297 GQMSQDKRLGALNKFKAKDFNILICTDVASRGLDIQGVDVVMNYDIPMNSKDYVHRVGRT 356
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG++G A+S VNQYE EW+ IE+L+G+++P+ + +E+L+L E ++++KRI+ +
Sbjct: 357 ARAGQSGYAVSFVNQYEAEWFKLIEQLLGRQIPDRKVDMDEILILREHISDSKRIALTKL 416
Query: 369 K-DSGNKRRRK 378
K D G+K+RRK
Sbjct: 417 KEDGGHKKRRK 427
>gi|224137340|ref|XP_002322533.1| predicted protein [Populus trichocarpa]
gi|222867163|gb|EEF04294.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 267/397 (67%), Positives = 325/397 (81%), Gaps = 5/397 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDLIG+A TGSGKTGAF LP L+A+L+ ++ +++V FF CVLSPTRELAIQI+EQFEA
Sbjct: 47 GKDLIGVAATGSGKTGAFVLPTLEAILKDSQERKSVQPFFVCVLSPTRELAIQIAEQFEA 106
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGK-RPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
LGSGI +RC VLVGG DM+QQ++ L K RPH++V TPGRL DHL+NTKGFSL LKYL+L
Sbjct: 107 LGSGIGVRCVVLVGGEDMLQQSIVLAKKRPHVIVGTPGRLADHLSNTKGFSLHALKYLIL 166
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADRLL+ DFEKSLDEIL IPR R+TYLFSATMT K KLQRACL+NPVKIEAA KYS
Sbjct: 167 DEADRLLSMDFEKSLDEILKAIPRNRRTYLFSATMTNKAGKLQRACLRNPVKIEAAFKYS 226
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
VDTL+Q + F+PA KDCYLV++L+ +++MVFTRTC T LAL+LR LG AIPI
Sbjct: 227 IVDTLEQGFYFMPAALKDCYLVHVLSSKKGATSMVFTRTCRETDFLALVLRKLGLGAIPI 286
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
+G MSQS RLGALNKFKAGE NILICTDVASRGLDI SVD+V+NY+IPTN+KDY HRVGR
Sbjct: 287 NGQMSQSNRLGALNKFKAGEFNILICTDVASRGLDILSVDVVVNYNIPTNAKDYFHRVGR 346
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGK--KLPEFPAEEEEVLLLLERVTEAKRISQ 365
TARAGR+G+AISLVNQ+++ + QIEK IG K+P++ A E+EVLLL ERVTEAKRIS+
Sbjct: 347 TARAGRSGLAISLVNQFDIGPFKQIEKHIGDDFKIPKYTANEDEVLLLAERVTEAKRISR 406
Query: 366 MTIKDSGNKRR--RKGGDEDDDIGRQFGINKKKLSKR 400
+I++ G +R R ++++DI + GI KKL ++
Sbjct: 407 KSIQEGGGNKRTDRLDDEDEEDIEKYLGIKNKKLRRK 443
>gi|115454521|ref|NP_001050861.1| Os03g0669000 [Oryza sativa Japonica Group]
gi|75327677|sp|Q7Y183.1|RH10_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 10
gi|31126733|gb|AAP44655.1| putative RNA helicase [Oryza sativa Japonica Group]
gi|53370642|gb|AAU89137.1| DEAD/DEAH box helicase domain containing protein [Oryza sativa
Japonica Group]
gi|108710302|gb|ABF98097.1| ATP-dependent RNA helicase DDX47, putative, expressed [Oryza sativa
Japonica Group]
gi|113549332|dbj|BAF12775.1| Os03g0669000 [Oryza sativa Japonica Group]
gi|125545183|gb|EAY91322.1| hypothetical protein OsI_12939 [Oryza sativa Indica Group]
gi|215695397|dbj|BAG90588.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 472
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 260/395 (65%), Positives = 320/395 (81%), Gaps = 6/395 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGL QTGSGKTGAFALPI+QALL+ + Q A FACVLSPTRELA QI +QFEA
Sbjct: 78 GRDLIGLGQTGSGKTGAFALPIIQALLKQDKPQ----ALFACVLSPTRELAFQIGQQFEA 133
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I L C VLVGGVD +QQ ++L KRPHIVV TPGRL+DHLT+TKGFSL LKYLVLD
Sbjct: 134 LGSAIGLSCTVLVGGVDRVQQAVSLAKRPHIVVGTPGRLLDHLTDTKGFSLNKLKYLVLD 193
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD+LLN +F+K+LD+ILNVIP+ R+T+LFSATMT KV KLQRACL+NPVK+E ASKYST
Sbjct: 194 EADKLLNVEFQKALDDILNVIPKERRTFLFSATMTNKVSKLQRACLRNPVKVEVASKYST 253
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTL+Q++ FVPA YKDC+LV++L E+ S M+F RTC++TRLLAL LRNL +AI IS
Sbjct: 254 VDTLRQEFYFVPADYKDCFLVHVLNELPGSMIMIFVRTCESTRLLALTLRNLRFKAISIS 313
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ KRLGALN+FK +CNILICTDVASRGLDI VD+VINYDIP NSKDY+HRVGRT
Sbjct: 314 GQMSQDKRLGALNRFKTKDCNILICTDVASRGLDIQGVDVVINYDIPMNSKDYVHRVGRT 373
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG TG A+SLVNQYE W+ IEKL+G ++P+ + E+++L ER++++KRI+ T+
Sbjct: 374 ARAGNTGYAVSLVNQYEAMWFKMIEKLLGYEIPDRKVDNAEIMILRERISDSKRIALTTM 433
Query: 369 KDSGN--KRRRKGGDEDDDIGRQFGINKKKLSKRK 401
K+ G K+RRK D++++ R +++K S K
Sbjct: 434 KEGGGHKKKRRKNEDDEEEEERNAPVSRKSKSFNK 468
>gi|125587400|gb|EAZ28064.1| hypothetical protein OsJ_12029 [Oryza sativa Japonica Group]
Length = 472
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 259/395 (65%), Positives = 319/395 (80%), Gaps = 6/395 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGL QTGSGKTGAF LPI+QALL+ + Q A FACVLSPTRELA QI +QFEA
Sbjct: 78 GRDLIGLGQTGSGKTGAFGLPIIQALLKQDKPQ----ALFACVLSPTRELAFQIGQQFEA 133
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I L C VLVGGVD +QQ ++L KRPHIVV TPGRL+DHLT+TKGFSL LKYLVLD
Sbjct: 134 LGSAIGLSCTVLVGGVDRVQQAVSLAKRPHIVVGTPGRLLDHLTDTKGFSLNKLKYLVLD 193
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD+LLN +F+K+LD+ILNVIP+ R+T+LFSATMT KV KLQRACL+NPVK+E ASKYST
Sbjct: 194 EADKLLNVEFQKALDDILNVIPKERRTFLFSATMTNKVSKLQRACLRNPVKVEVASKYST 253
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTL+Q++ FVPA YKDC+LV++L E+ S M+F RTC++TRLLAL LRNL +AI IS
Sbjct: 254 VDTLRQEFYFVPADYKDCFLVHVLNELPGSMIMIFVRTCESTRLLALTLRNLRFKAISIS 313
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ KRLGALN+FK +CNILICTDVASRGLDI VD+VINYDIP NSKDY+HRVGRT
Sbjct: 314 GQMSQDKRLGALNRFKTKDCNILICTDVASRGLDIQGVDVVINYDIPMNSKDYVHRVGRT 373
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG TG A+SLVNQYE W+ IEKL+G ++P+ + E+++L ER++++KRI+ T+
Sbjct: 374 ARAGNTGYAVSLVNQYEAMWFKMIEKLLGYEIPDRKVDNAEIMILRERISDSKRIALTTM 433
Query: 369 KDSGN--KRRRKGGDEDDDIGRQFGINKKKLSKRK 401
K+ G K+RRK D++++ R +++K S K
Sbjct: 434 KEGGGHKKKRRKNEDDEEEEERNAPVSRKSKSFNK 468
>gi|357121637|ref|XP_003562524.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like
[Brachypodium distachyon]
Length = 447
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 253/371 (68%), Positives = 308/371 (83%), Gaps = 7/371 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGL QTGSGKTGAFALPI+QALLE + FFACV+SPTRELAIQI+EQFEA
Sbjct: 55 GRDLIGLGQTGSGKTGAFALPIIQALLEHRQ------PFFACVMSPTRELAIQIAEQFEA 108
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I L C+VLVGGVD MQQ L++ KRPHIVV TPGRL+DHL +TKGFSL +KYLVLD
Sbjct: 109 LGSAIGLVCSVLVGGVDRMQQVLSIAKRPHIVVGTPGRLLDHLKDTKGFSLNKVKYLVLD 168
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD+LLN +F++SLD+IL IP+ R+TYLFSATMTKKV KLQRACL+NPVK+E +SKYST
Sbjct: 169 EADKLLNLEFKESLDDILKAIPKERRTYLFSATMTKKVAKLQRACLRNPVKVEVSSKYST 228
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTLKQ++ FVPA YKDCYLV+ L E+ S M+F RTC++TRLLAL LRNLG +A+ IS
Sbjct: 229 VDTLKQEWYFVPAAYKDCYLVHALNELPGSMIMIFVRTCESTRLLALTLRNLGFKALSIS 288
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ KRLGALNKFKA + NILICTDVASRGLDI VD+VINYDIP NSKDY+HRVGRT
Sbjct: 289 GQMSQDKRLGALNKFKAKDFNILICTDVASRGLDIQGVDVVINYDIPMNSKDYVHRVGRT 348
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG++G A+SLVNQYE +W+ IE L+GK++ + +E+++L E +++++RI+ +
Sbjct: 349 ARAGKSGYAVSLVNQYEGQWFKMIEALLGKEIDLRKVDSDEIMILREHISDSRRIALTKL 408
Query: 369 K-DSGNKRRRK 378
K D G+K+RRK
Sbjct: 409 KEDGGHKKRRK 419
>gi|432871164|ref|XP_004071864.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Oryzias latipes]
Length = 488
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 254/390 (65%), Positives = 316/390 (81%), Gaps = 10/390 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPILQ+LL A QR VL+PTRELA QISEQFEA
Sbjct: 76 GKDVIGLAETGSGKTGAFALPILQSLL--ASPQR----LHTLVLTPTRELAFQISEQFEA 129
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+DMM Q+L L K+PHIV+ATPGRL+DH+ NTKGFSL LK+LV+D
Sbjct: 130 LGSSIGVKCAVIVGGIDMMSQSLVLAKKPHIVIATPGRLIDHMENTKGFSLRALKFLVMD 189
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LK+PVK ++KYST
Sbjct: 190 EADRILNMDFETEVDKILKVIPRERRTFLFSATMTKKVQKLQRAALKDPVKCAVSTKYST 249
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD L+Q Y F+PAKYKDCYLV IL E++ +S M+F TC+ + +ALMLRNLG AIP+
Sbjct: 250 VDKLQQYYVFIPAKYKDCYLVSILNELAGNSFMIFCSTCNNAQRVALMLRNLGITAIPLH 309
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRLGALNKFK+ ++L+ TDVASRGLDIP VD VINYDIPT+SKDYIHRVGRT
Sbjct: 310 GQMSQNKRLGALNKFKSKSRSVLLATDVASRGLDIPHVDCVINYDIPTHSKDYIHRVGRT 369
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+ V QY++E + +IE LIGKKLP FP +EEEV++L+ERV+EA+R +++ +
Sbjct: 370 ARAGRSGKSITFVTQYDVELFQRIESLIGKKLPAFPTQEEEVMMLVERVSEAQRFARVEM 429
Query: 369 KDSGNKRRR---KGGDEDDDIGRQFGINKK 395
K+ G KR+R + GDE DD + G+ KK
Sbjct: 430 KEQGEKRKRPRGRDGDE-DDTEQASGVRKK 458
>gi|299829301|ref|NP_001015005.2| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Rattus norvegicus]
gi|149049184|gb|EDM01638.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform CRA_a [Rattus
norvegicus]
Length = 455
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 254/399 (63%), Positives = 318/399 (79%), Gaps = 12/399 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+D M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 235 VEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP ++EEV++L ERV+EA+R ++M +
Sbjct: 355 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDEEVMMLTERVSEAQRFARMEL 414
Query: 369 KDSGNKRRRKGGD--EDDDIGRQFGINKK----KLSKRK 401
++ G K++RK D +DDD G+ K K+ KRK
Sbjct: 415 REHGEKKKRKREDPGDDDDTEGAIGVRNKVAGGKMKKRK 453
>gi|354478220|ref|XP_003501313.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Cricetulus
griseus]
Length = 455
Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust.
Identities = 253/399 (63%), Positives = 318/399 (79%), Gaps = 12/399 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+D M Q++AL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQCAVIVGGIDSMSQSIALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 235 VEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP ++EEV++L ERV+EA+R ++M +
Sbjct: 355 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDEEVMMLTERVSEAQRFARMEL 414
Query: 369 KDSGNKRRRKGGD--EDDDIGRQFGINKK----KLSKRK 401
++ G K++RK D +DDD G+ K K+ KRK
Sbjct: 415 REHGEKKKRKREDAGDDDDTEGAMGVRNKVAGGKMKKRK 453
>gi|334348319|ref|XP_001371236.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Monodelphis domestica]
Length = 459
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 252/399 (63%), Positives = 317/399 (79%), Gaps = 12/399 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALL+ + FFA VL+PTRELA QISEQFEA
Sbjct: 62 GRDIIGLAETGSGKTGAFALPILNALLDTPQR------FFALVLTPTRELAFQISEQFEA 115
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I + CAV+VGG+D M Q+LAL K+PH+++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 116 LGSSIGVECAVIVGGIDSMSQSLALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMD 175
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL +IPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 176 EADRILNMDFETEVDKILKLIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 235
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S MVF TC+ T+ AL+LRNLG AIP+
Sbjct: 236 VEKLQQYYLFIPSKFKDSYLVYILNELAGNSFMVFCSTCNNTQRTALLLRNLGFTAIPLH 295
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 296 GQMSQNKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 355
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+ V QY++E Y +IE LIGKKLP FP +EEEV+LL ERV EA+R ++M +
Sbjct: 356 ARAGRSGKSITFVTQYDVELYQRIEHLIGKKLPAFPTQEEEVMLLTERVAEAQRFARMEM 415
Query: 369 KDSGNKRR--RKGGDEDDDIGRQFGINKK----KLSKRK 401
++ G KR+ R+ D++DD G+ K K+ KRK
Sbjct: 416 REQGEKRKRFREDKDDNDDTENATGVRNKVTGGKMKKRK 454
>gi|27229058|ref|NP_080636.2| probable ATP-dependent RNA helicase DDX47 [Mus musculus]
gi|52782790|sp|Q9CWX9.2|DDX47_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX47; AltName:
Full=DEAD box protein 47
gi|26345792|dbj|BAC36547.1| unnamed protein product [Mus musculus]
gi|26368455|dbj|BAB26843.2| unnamed protein product [Mus musculus]
gi|66365081|gb|AAH95944.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Mus musculus]
gi|124297422|gb|AAI32243.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Mus musculus]
gi|124298172|gb|AAI32245.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Mus musculus]
gi|148678592|gb|EDL10539.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform CRA_b [Mus
musculus]
Length = 455
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 255/400 (63%), Positives = 318/400 (79%), Gaps = 14/400 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+D M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 235 VEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP ++EEV++L ERV EA+R ++M +
Sbjct: 355 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDEEVMMLTERVNEAQRFARMEL 414
Query: 369 KDSGNKRRRK---GGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++RK GD+DD G G+ K K+ KRK
Sbjct: 415 REHGEKKKRKREDAGDDDDKEG-AIGVRNKVAGGKMKKRK 453
>gi|440910729|gb|ELR60491.1| Putative ATP-dependent RNA helicase DDX47 [Bos grunniens mutus]
Length = 457
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 254/400 (63%), Positives = 317/400 (79%), Gaps = 14/400 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 63 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 116
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+D M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 117 LGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMD 176
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 177 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 236
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 237 VEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 296
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 297 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 356
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +
Sbjct: 357 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMEL 416
Query: 369 KDSGNKRRRK---GGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 417 REHGEKKKRSREDAGDNDDTEG-AIGVRNKVAGGKMKKRK 455
>gi|344243858|gb|EGV99961.1| putative ATP-dependent RNA helicase DDX47 [Cricetulus griseus]
Length = 586
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 253/399 (63%), Positives = 318/399 (79%), Gaps = 12/399 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 192 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 245
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+D M Q++AL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 246 LGSSIGVQCAVIVGGIDSMSQSIALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMD 305
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 306 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 365
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 366 VEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 425
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 426 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 485
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP ++EEV++L ERV+EA+R ++M +
Sbjct: 486 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDEEVMMLTERVSEAQRFARMEL 545
Query: 369 KDSGNKRRRKGGD--EDDDIGRQFGINKK----KLSKRK 401
++ G K++RK D +DDD G+ K K+ KRK
Sbjct: 546 REHGEKKKRKREDAGDDDDTEGAMGVRNKVAGGKMKKRK 584
>gi|114052016|ref|NP_001039850.1| probable ATP-dependent RNA helicase DDX47 [Bos taurus]
gi|109825481|sp|Q29S22.1|DDX47_BOVIN RecName: Full=Probable ATP-dependent RNA helicase DDX47; AltName:
Full=DEAD box protein 47
gi|88758683|gb|AAI13208.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Bos taurus]
gi|296487253|tpg|DAA29366.1| TPA: probable ATP-dependent RNA helicase DDX47 [Bos taurus]
Length = 457
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 252/399 (63%), Positives = 317/399 (79%), Gaps = 12/399 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 63 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 116
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+D M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 117 LGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMD 176
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 177 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 236
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 237 VEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 296
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 297 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 356
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +
Sbjct: 357 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMEL 416
Query: 369 KDSGNKRRRKGGD--EDDDIGRQFGINKK----KLSKRK 401
++ G K++R D ++DD G+ K K+ KRK
Sbjct: 417 REHGEKKKRSREDVGDNDDTEGAIGVRNKVAGGKMKKRK 455
>gi|426225486|ref|XP_004006897.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Ovis aries]
Length = 457
Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust.
Identities = 253/400 (63%), Positives = 317/400 (79%), Gaps = 14/400 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 63 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 116
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+D M Q+LAL K+PH+V+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 117 LGSSIGVQCAVIVGGIDSMSQSLALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMD 176
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 177 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 236
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 237 VEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 296
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 297 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 356
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +
Sbjct: 357 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMEL 416
Query: 369 KDSGNKRRRK---GGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 417 REHGEKKKRSREDTGDNDDTEG-AIGVRNKVAGGKMKKRK 455
>gi|148237396|ref|NP_001085167.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Xenopus laevis]
gi|47938654|gb|AAH72214.1| MGC81303 protein [Xenopus laevis]
Length = 448
Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust.
Identities = 250/397 (62%), Positives = 316/397 (79%), Gaps = 10/397 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPILQ LLE + +A VL+PTRELA QISEQFEA
Sbjct: 56 GRDIIGLAETGSGKTGAFALPILQTLLESPQR------LYALVLTPTRELAFQISEQFEA 109
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+DMM Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L +KYLV+D
Sbjct: 110 LGSSIGVKSAVIVGGIDMMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRAIKYLVMD 169
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV KLQRA LK+PVK +SKY T
Sbjct: 170 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVHKLQRAALKDPVKCAVSSKYQT 229
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ +AL+LRNLG AIP+
Sbjct: 230 VEKLQQFYVFIPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRVALLLRNLGFTAIPLH 289
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M Q+KRLGALNKFKA +IL+ TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 290 GQMGQNKRLGALNKFKAKSRSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRT 349
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V+QY++E + +IE LIGKKLP FP +EEEV++L ERV+EA+R +++ +
Sbjct: 350 ARAGRSGKAITFVSQYDVELFQRIEHLIGKKLPAFPTQEEEVMMLNERVSEAQRFARIEL 409
Query: 369 KDSGNKRRRKGGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R D DDD G+ KK K K+K
Sbjct: 410 REHGEKKKRPRNDADDDKEGSLGVRKKVTGGKFKKKK 446
>gi|156362250|ref|XP_001625693.1| predicted protein [Nematostella vectensis]
gi|156212537|gb|EDO33593.1| predicted protein [Nematostella vectensis]
Length = 446
Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust.
Identities = 245/377 (64%), Positives = 312/377 (82%), Gaps = 6/377 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPILQALL+ QR FA +L+PTRELA QISEQ EA
Sbjct: 51 GKDVIGLAETGSGKTGAFALPILQALLD--NPQR----LFALILTPTRELAFQISEQCEA 104
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI ++CAV+VGG+DMM Q L L K+PHI++ATPGRL+DHL NTKGFSL TLKYLV+D
Sbjct: 105 LGSGIGVKCAVIVGGIDMMSQALMLAKKPHIIIATPGRLIDHLENTKGFSLRTLKYLVMD 164
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFEK +D++L VIP+ R+T+LFSATMTKKV+KLQRA L+ PVK+E A+KY T
Sbjct: 165 EADRILNMDFEKEVDKLLKVIPKERRTFLFSATMTKKVQKLQRASLQAPVKVEVATKYQT 224
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KDCYLVY+L E++ +S MVF TC+ + + LMLRNLG A+P+
Sbjct: 225 VEKLQQSYLFIPSKFKDCYLVYVLNELAGNSFMVFCGTCNNVQRVTLMLRNLGLDAVPLH 284
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLGALNKFK+ +IL+ TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 285 GQMSQSKRLGALNKFKSKSRSILVATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRT 344
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +++ V QY++E Y +IE LI KKLP++P EEEV+LL+ERVTEA+R ++M +
Sbjct: 345 ARAGRSGRSVTFVTQYDVELYQRIEHLIAKKLPQYPTVEEEVMLLMERVTEAQRYARMEL 404
Query: 369 KDSGNKRRRKGGDEDDD 385
++ +K++R D+ D+
Sbjct: 405 REINDKKKRAPEDDLDE 421
>gi|302822183|ref|XP_002992751.1| hypothetical protein SELMODRAFT_448879 [Selaginella moellendorffii]
gi|300139492|gb|EFJ06232.1| hypothetical protein SELMODRAFT_448879 [Selaginella moellendorffii]
Length = 733
Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust.
Identities = 262/391 (67%), Positives = 314/391 (80%), Gaps = 25/391 (6%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLAQTGSGKT AFALPILQAL Q+ P FFACVLSPTRELAIQISEQFEA
Sbjct: 211 GRDLIGLAQTGSGKTAAFALPILQALF-----QQCHP-FFACVLSPTRELAIQISEQFEA 264
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I +R +VGGV M+ Q +ALGK PHIVVATPGRL+DHLTNTKGFSL +KYLVLD
Sbjct: 265 LGSQIGVRSVAIVGGVSMVDQAVALGKNPHIVVATPGRLLDHLTNTKGFSLRNVKYLVLD 324
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD++L++DFEK +DEIL V+PR R+T+LFSATMT KV KLQRACL+NP K+E +SKY+T
Sbjct: 325 EADKILHNDFEKEVDEILKVVPRERKTFLFSATMTNKVAKLQRACLRNPTKVEVSSKYTT 384
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
TLKQ+Y FVPAK+KDCY V++L E++ S+ MVFTRTCD+TR LAL+LR+LG AIPIS
Sbjct: 385 ALTLKQEYVFVPAKHKDCYFVFLLNEMAGSTAMVFTRTCDSTRRLALILRSLGFGAIPIS 444
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKR GAL KFKAG+ N+LICTDVASRGLDIPSVD+ DYIHRVGRT
Sbjct: 445 GQMSQSKRSGALLKFKAGDRNLLICTDVASRGLDIPSVDV-----------DYIHRVGRT 493
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AIS+V QY+++ Y +IE LIG LPEFPA+ +EVLLL ERV+EA+R++ M I
Sbjct: 494 ARAGRSGRAISIVTQYDVDLYKRIEDLIGMTLPEFPAKADEVLLLEERVSEAQRLAAMHI 553
Query: 369 KD---SGNKRRRKGGDED--DDI---GRQFG 391
++ S ++R+ GD+D DD+ GRQ G
Sbjct: 554 REKDASKKSKKRRNGDDDEADDVLALGRQGG 584
>gi|410901863|ref|XP_003964414.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Takifugu
rubripes]
Length = 471
Score = 516 bits (1328), Expect = e-144, Method: Compositional matrix adjust.
Identities = 252/389 (64%), Positives = 316/389 (81%), Gaps = 8/389 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPILQ+LL A QR VL+PTRELA QISEQFEA
Sbjct: 75 GKDVIGLAETGSGKTGAFALPILQSLL--ASPQR----LHTLVLTPTRELAFQISEQFEA 128
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+DMM Q+L L K+PHIV+ATPGRL+DHL NTKGF+L LK+LV+D
Sbjct: 129 LGSSIGVKCAVIVGGIDMMSQSLVLAKKPHIVIATPGRLIDHLENTKGFTLRALKFLVMD 188
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LK+PVK ++KYST
Sbjct: 189 EADRILNMDFETEVDKILKVIPRERRTFLFSATMTKKVQKLQRAALKDPVKCAVSTKYST 248
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD L+Q Y F+P+KYKDCYLV IL +++ +S ++F TC+ + +AL+LRNLG AI +
Sbjct: 249 VDKLQQYYIFIPSKYKDCYLVSILNDLAGNSFIIFCSTCNNAQRVALLLRNLGITAISLH 308
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRLGALNKFK+ ++L+ TDVASRGLDIP VD VINYDIPT+SKDYIHRVGRT
Sbjct: 309 GQMSQNKRLGALNKFKSKSRSVLLATDVASRGLDIPHVDCVINYDIPTHSKDYIHRVGRT 368
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+ V QY++E + +IE LIGKKLP FP +EEEV++L+ERV+EA+R +++ +
Sbjct: 369 ARAGRSGKSITFVTQYDVELFQRIESLIGKKLPAFPTQEEEVMMLVERVSEAQRFARLEM 428
Query: 369 KDSGNKRRR-KGGDEDDDIGRQ-FGINKK 395
K+ G KR+R KGGD DDD Q G+ KK
Sbjct: 429 KEQGEKRKRPKGGDRDDDDTEQSSGVRKK 457
>gi|291230627|ref|XP_002735268.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 47-like
[Saccoglossus kowalevskii]
Length = 446
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 250/377 (66%), Positives = 311/377 (82%), Gaps = 7/377 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPILQ LLE QR FA +L+PTRELA QISEQFEA
Sbjct: 60 GKDVIGLAETGSGKTGAFALPILQDLLE--HPQR----LFALILTPTRELAFQISEQFEA 113
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+DMM Q L L K+PH+VVATPGRL+DHL NTKGF+L ++KYLV+D
Sbjct: 114 LGSAIGIKCAVVVGGIDMMSQALQLAKKPHVVVATPGRLVDHLENTKGFNLRSVKYLVMD 173
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE LD+IL VIPR R+TYL+SATMTKKV KLQRA LKNPVK+E +KY T
Sbjct: 174 EADRILNMDFEIELDKILKVIPRERRTYLYSATMTKKVAKLQRASLKNPVKVEVNTKYQT 233
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L Q Y F+P+KYKD YLVYIL E++ +S MVF TC+ T+ +ALMLRNLG A+P+
Sbjct: 234 VEKLLQYYLFIPSKYKDVYLVYILNELAGNSFMVFCSTCNNTQRVALMLRNLGLTAVPLH 293
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRLG LNKFK + +ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 294 GQMSQNKRLGMLNKFKGKDRSILIATDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRT 353
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG++G AI+ V QY++E Y +IE+LI K+LP +P+EEE+V++L+ERVTEA+R ++M +
Sbjct: 354 ARAGKSGKAITFVTQYDVELYQRIEQLISKQLPLYPSEEEDVMMLVERVTEAQRYARMEM 413
Query: 369 KDSGNKRRR-KGGDEDD 384
D+ +K+R+ + GD DD
Sbjct: 414 TDNDDKKRKGRRGDFDD 430
>gi|348511400|ref|XP_003443232.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Oreochromis niloticus]
Length = 479
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 249/382 (65%), Positives = 313/382 (81%), Gaps = 7/382 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPILQ+LL A QR VL+PTRELA QISEQFEA
Sbjct: 74 GKDVIGLAETGSGKTGAFALPILQSLL--ASPQR----LHTLVLTPTRELAFQISEQFEA 127
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+DMM Q+L L K+PH+V+ATPGRL+DHL NTKGFSL LK+LV+D
Sbjct: 128 LGSSIGVKCAVIVGGIDMMSQSLVLAKKPHVVIATPGRLIDHLENTKGFSLRALKFLVMD 187
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KL+RA LK+PVK ++KYST
Sbjct: 188 EADRILNMDFETEVDKILKVIPRERRTFLFSATMTKKVQKLERAALKDPVKCAVSTKYST 247
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD L+Q Y F+P+KYKDCYLV IL E++ +S ++F TC+ + +AL+LRNLG AIP+
Sbjct: 248 VDKLQQYYIFIPSKYKDCYLVSILNELAGNSFIIFCSTCNTAQRVALLLRNLGITAIPLH 307
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRLGALNKFK+ ++L+ TDVASRGLDIP VD VINYDIPT+SKDYIHRVGRT
Sbjct: 308 GQMSQNKRLGALNKFKSKSRSVLLATDVASRGLDIPHVDCVINYDIPTHSKDYIHRVGRT 367
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+ V QY++E + +IE LIGKKLP FP +EEEV++L+ERV+EA+R +++ +
Sbjct: 368 ARAGRSGKSITFVTQYDVELFQRIETLIGKKLPAFPTQEEEVMMLVERVSEAQRFAKIEM 427
Query: 369 KDSGNKRRR-KGGDEDDDIGRQ 389
K+ G+KR+R K GD DDD Q
Sbjct: 428 KEQGDKRKRPKRGDGDDDDTEQ 449
>gi|348569354|ref|XP_003470463.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Cavia porcellus]
Length = 455
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 248/382 (64%), Positives = 309/382 (80%), Gaps = 9/382 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 60 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 113
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+D M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 114 LGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMD 173
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 174 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 233
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 234 VEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 293
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 294 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 353
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +
Sbjct: 354 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMEL 413
Query: 369 KDSGNKRRRK---GGDEDDDIG 387
++ G K++R GD DD G
Sbjct: 414 REHGEKKKRSREDAGDNDDTEG 435
>gi|301765212|ref|XP_002918022.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Ailuropoda melanoleuca]
Length = 455
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 251/399 (62%), Positives = 317/399 (79%), Gaps = 12/399 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 235 VEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +E+EV++L ERVTEA+R ++M +
Sbjct: 355 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQEDEVMMLTERVTEAQRFARMEL 414
Query: 369 KDSGNKRRRKGGD--EDDDIGRQFGINKK----KLSKRK 401
++ G K++R D ++DD+ G+ K K+ KRK
Sbjct: 415 REHGEKKKRTREDAGDNDDMEGAMGVRNKVAGGKMKKRK 453
>gi|351711397|gb|EHB14316.1| Putative ATP-dependent RNA helicase DDX47 [Heterocephalus glaber]
Length = 454
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 250/399 (62%), Positives = 318/399 (79%), Gaps = 12/399 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALL+ + FA VL+PTRELA QISEQFEA
Sbjct: 60 GRDIIGLAETGSGKTGAFALPILNALLDTPQR------LFALVLTPTRELAFQISEQFEA 113
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+D M Q+LAL K+PH+V+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 114 LGSSIGVQCAVIVGGIDSMSQSLALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMD 173
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 174 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 233
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 234 VEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 293
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 294 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 353
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +
Sbjct: 354 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMEL 413
Query: 369 KDSGNKRRRKGGD--EDDDIGRQFGINKK----KLSKRK 401
++ G K++R D ++DD+ G+ K K+ KRK
Sbjct: 414 REHGEKKKRSREDAGDNDDMEGAIGVRNKVAGGKMKKRK 452
>gi|11121196|emb|CAC14786.1| DEAD box protein [Homo sapiens]
Length = 455
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 252/400 (63%), Positives = 316/400 (79%), Gaps = 14/400 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 235 VEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA E +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMSQSKRLGSLNKFKAKESSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +
Sbjct: 355 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMEL 414
Query: 369 KDSGNKRRRK---GGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 415 REHGEKKKRSREDAGDNDDTEG-AIGVRNKVAGGKMKKRK 453
>gi|395538707|ref|XP_003771316.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Sarcophilus harrisii]
Length = 460
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/369 (66%), Positives = 303/369 (82%), Gaps = 6/369 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FFA VL+PTRELA QISEQFEA
Sbjct: 62 GRDIIGLAETGSGKTGAFALPILNALLETPQR------FFALVLTPTRELAFQISEQFEA 115
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I + CAV+VGG+D M Q+LAL K+PH+++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 116 LGSSIGVECAVIVGGIDSMSQSLALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMD 175
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL +IPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 176 EADRILNMDFETEVDKILKLIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 235
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S MVF TC+ T+ AL+LRNLG AIP+
Sbjct: 236 VEKLQQYYLFIPSKFKDSYLVYILNELAGNSFMVFCSTCNNTQRTALLLRNLGFTAIPLH 295
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 296 GQMSQNKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 355
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+ V QY++E Y +IE LIGKKLP FP +EEEV+LL ERV EA+R ++M +
Sbjct: 356 ARAGRSGKSITFVTQYDVELYQRIEHLIGKKLPAFPTQEEEVMLLTERVAEAQRFARMEM 415
Query: 369 KDSGNKRRR 377
++ G KR+R
Sbjct: 416 REQGEKRKR 424
>gi|327272750|ref|XP_003221147.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Anolis carolinensis]
Length = 445
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 249/398 (62%), Positives = 317/398 (79%), Gaps = 11/398 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPILQALLE + FFA VL+PTRELA QISEQFEA
Sbjct: 53 GRDIIGLAETGSGKTGAFALPILQALLETPQR------FFALVLTPTRELAFQISEQFEA 106
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+DMM Q+LAL K+PH+++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 107 LGSSIGVQTAVIVGGIDMMAQSLALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMD 166
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LK+PVK +SKY T
Sbjct: 167 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKDPVKCAVSSKYQT 226
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 227 VEKLQQYYVFIPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 286
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M+Q+KRLG+LNKFKA ++L+ TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 287 GQMNQNKRLGSLNKFKAKARSVLLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRT 346
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+ V QY++E + +IE LIGKKLP FP +E+EV++L ERV EA+R ++M +
Sbjct: 347 ARAGRSGKSITFVTQYDVELFQRIEHLIGKKLPAFPTQEDEVMMLTERVAEAQRFARMEL 406
Query: 369 KDSGNKRR-RKGGDEDDDIGRQFGINKK----KLSKRK 401
+ G+K+R R+ +E DD G+ K K KRK
Sbjct: 407 QQKGDKKRSREEANEPDDAEGAMGVRNKVAGGKKKKRK 444
>gi|424513552|emb|CCO66174.1| predicted protein [Bathycoccus prasinos]
Length = 487
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 260/406 (64%), Positives = 314/406 (77%), Gaps = 19/406 (4%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKTGAFALP+LQ LL AF VLSPTRELA QI+EQFE
Sbjct: 74 GKDVIGLAQTGSGKTGAFALPVLQDLLHEPR------AFHTLVLSPTRELASQIAEQFEC 127
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG I ++CAVLVGG+DM Q+L +GKRPH++V TPGR++DHL NTKGFSL LK L+LD
Sbjct: 128 LGKDIGVKCAVLVGGMDMTSQSLQIGKRPHVLVGTPGRVVDHLENTKGFSLRQLKVLILD 187
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLLN DFE+ +D IL VIPR R+T LFSATMT KV KLQRACL++PVK+E ASKYST
Sbjct: 188 EADRLLNLDFEEEIDTILKVIPRERRTQLFSATMTSKVNKLQRACLRDPVKVEVASKYST 247
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V +LKQ Y FVPAK+K+CY Y+L E+SAS+ M+FTRTC+ TR LAL+ RNLG AIPI
Sbjct: 248 VKSLKQNYLFVPAKHKECYACYLLNELSASTIMMFTRTCEQTRKLALVARNLGFSAIPIH 307
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ KR GALNKFK GE NIL+ TDVASRGLDIPSVD+VIN+D+P NSKDY+HRVGRT
Sbjct: 308 GQMSQPKRQGALNKFKGGERNILVATDVASRGLDIPSVDVVINFDVPMNSKDYVHRVGRT 367
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G+AI+LV QY++E Y +IE+LI K+L ++P EEE+ L++LERV EA+RI+ +
Sbjct: 368 ARAGRSGLAITLVTQYDVELYQKIERLIEKRLEKYPVEEEQCLVMLERVNEAQRIAASQM 427
Query: 369 KDS------GNKRRRKGGDEDDD----IGRQ---FGINKKKLSKRK 401
+D+ G KR R +DD IGR+ FG KK + K K
Sbjct: 428 RDADAKKGGGFKRIRNDDVGEDDLSAIIGRKKYAFGDEKKGMKKTK 473
>gi|291392610|ref|XP_002712705.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1
[Oryctolagus cuniculus]
Length = 455
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 251/399 (62%), Positives = 315/399 (78%), Gaps = 12/399 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I + CAV+VGG+D M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVHCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 235 VEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +
Sbjct: 355 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVAEAQRFARMEL 414
Query: 369 KDSGNKRRRKGGD--EDDDIGRQFGINKK----KLSKRK 401
++ G K++R D ++DD G+ K K+ KRK
Sbjct: 415 REHGEKKKRAREDVGDNDDTEGAMGVRNKVAGGKMKKRK 453
>gi|149713746|ref|XP_001501494.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Equus caballus]
Length = 455
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 251/399 (62%), Positives = 316/399 (79%), Gaps = 12/399 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 235 VEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +
Sbjct: 355 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMEL 414
Query: 369 KDSGNKRRRKGGD--EDDDIGRQFGINKK----KLSKRK 401
++ G K++R D ++DD G+ K K+ KRK
Sbjct: 415 REHGEKKKRTREDVGDNDDTEGALGVRNKVAGGKMKKRK 453
>gi|383854018|ref|XP_003702519.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Megachile rotundata]
Length = 453
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 247/390 (63%), Positives = 313/390 (80%), Gaps = 12/390 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKT AFALPILQALLE QR +FA +L+PTRELA QISEQFEA
Sbjct: 55 GKDIIGLAETGSGKTAAFALPILQALLE--NPQR----YFALILTPTRELAFQISEQFEA 108
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+DMM Q L L K+PHI++ATPGRL+DHL NTKGF+L +LK+LV+D
Sbjct: 109 LGSSIGVKCAVIVGGMDMMSQALILAKKPHILIATPGRLIDHLENTKGFNLRSLKFLVMD 168
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T LFSATMTKKV+KLQRA L+NPVK+E ++KY T
Sbjct: 169 EADRILNMDFEVEVDKILRVIPRERRTLLFSATMTKKVQKLQRASLRNPVKVEVSTKYQT 228
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P K+KD YLV+IL E++ +S M+F TC+ T AL+LRNLG A+P+
Sbjct: 229 VEKLQQYYIFIPVKFKDVYLVHILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPLH 288
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KR+ AL KFKA +ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 289 GQMSQNKRIAALTKFKAKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRT 348
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+ V QY++E Y +IE+LI K+LP +P +EEEV++L ERV EA+RI +M +
Sbjct: 349 ARAGRSGRSITFVTQYDVELYQRIEQLISKQLPLYPTQEEEVMVLQERVAEAQRIVKMEL 408
Query: 369 KD------SGNKRRRKGGDEDDDIGRQFGI 392
KD SG +++ +GGDEDDD + G+
Sbjct: 409 KDIEENKKSGKRKKHQGGDEDDDTEQSMGV 438
>gi|431908355|gb|ELK11952.1| Putative ATP-dependent RNA helicase DDX47 [Pteropus alecto]
Length = 472
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 254/400 (63%), Positives = 315/400 (78%), Gaps = 14/400 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 78 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 131
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 132 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMD 191
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 192 EADRILNMDFETEVDKILKVIPRDRKTLLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 251
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 252 VEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 311
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 312 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 371
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP E++EV++L ERVTEA+R ++M +
Sbjct: 372 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTEDDEVMMLTERVTEAQRFARMEL 431
Query: 369 KDSGNKRRR---KGGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 432 REHGEKKKRTREDAGDNDDTEG-AIGVRNKVAGGKMKKRK 470
>gi|449279156|gb|EMC86802.1| putative ATP-dependent RNA helicase DDX47, partial [Columba livia]
Length = 453
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 245/387 (63%), Positives = 310/387 (80%), Gaps = 8/387 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPILQALLE + FA VL+PTRELA QISEQFEA
Sbjct: 63 GRDIIGLAETGSGKTGAFALPILQALLETPQR------LFALVLTPTRELAFQISEQFEA 116
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I + V+VGG+D M Q+LAL K+PH+++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 117 LGSSIGVHTTVIVGGIDAMSQSLALAKKPHVIIATPGRLVDHLENTKGFNLRALKYLVMD 176
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 177 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 236
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLV+IL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 237 VEKLQQYYIFIPSKFKDSYLVHILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 296
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRLGALNKFKA +IL+ TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 297 GQMSQNKRLGALNKFKAKARSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRT 356
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+ V QY++E + +IE LIGKKLP FP +EEEV++L ERV EA+R+++M +
Sbjct: 357 ARAGRSGKSITFVTQYDVELFQRIEHLIGKKLPAFPMQEEEVMMLTERVAEAQRLARMEL 416
Query: 369 KDSGNKRRRKGGDEDDDIGRQFGINKK 395
++ G K+R + ++DDD G+ K
Sbjct: 417 REQGEKKRSR--NDDDDTEEAIGVRNK 441
>gi|296210930|ref|XP_002752172.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Callithrix jacchus]
Length = 455
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 250/399 (62%), Positives = 316/399 (79%), Gaps = 12/399 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 235 VEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +
Sbjct: 355 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMEL 414
Query: 369 KDSGNKRRRKGGD--EDDDIGRQFGINKK----KLSKRK 401
++ G K++R D ++DD G+ K K+ KRK
Sbjct: 415 REHGEKKKRSREDARDNDDTEGAIGVRNKVAGGKMKKRK 453
>gi|417401266|gb|JAA47524.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 455
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 252/400 (63%), Positives = 316/400 (79%), Gaps = 14/400 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 235 VEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M+QSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMNQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +
Sbjct: 355 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMEL 414
Query: 369 KDSGNKRRR---KGGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 415 REHGEKKKRTREDAGDNDDTEG-AIGVRNKVAGGKMKKRK 453
>gi|73997167|ref|XP_534885.2| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Canis lupus familiaris]
Length = 456
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 247/382 (64%), Positives = 308/382 (80%), Gaps = 9/382 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 235 VEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +
Sbjct: 355 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMEL 414
Query: 369 KDSGNKRRR---KGGDEDDDIG 387
++ G K++R GD DD G
Sbjct: 415 REHGEKKKRTREDAGDNDDTEG 436
>gi|410963864|ref|XP_003988479.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Felis catus]
Length = 455
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 251/400 (62%), Positives = 316/400 (79%), Gaps = 14/400 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PH+++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 235 VEKLQQYYVFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +
Sbjct: 355 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMEL 414
Query: 369 KDSGNKRRR---KGGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 415 REHGEKKKRVREDTGDNDDTEG-AMGVRNKVAGGKMKKRK 453
>gi|297691246|ref|XP_002823001.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Pongo abelii]
Length = 455
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 250/399 (62%), Positives = 315/399 (78%), Gaps = 12/399 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 235 VEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +
Sbjct: 355 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMEL 414
Query: 369 KDSGNKRRRK---GGDEDDD---IGRQFGINKKKLSKRK 401
++ G K++R GD DD IG + + K+ KRK
Sbjct: 415 REHGEKKKRSREDAGDNDDTEGAIGVRNKVTGGKMKKRK 453
>gi|350537559|ref|NP_001233477.1| probable ATP-dependent RNA helicase DDX47 [Pan troglodytes]
gi|343958142|dbj|BAK62926.1| apolipoprotein-L domain-containing protein 1 [Pan troglodytes]
gi|410264252|gb|JAA20092.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Pan troglodytes]
gi|410305384|gb|JAA31292.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Pan troglodytes]
gi|410329313|gb|JAA33603.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Pan troglodytes]
Length = 455
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 251/400 (62%), Positives = 315/400 (78%), Gaps = 14/400 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 235 VEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +
Sbjct: 355 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMEL 414
Query: 369 KDSGNKRRRK---GGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 415 REHGEKKKRSREDAGDNDDTEG-AIGVRNKVAGGKMKKRK 453
>gi|355564029|gb|EHH20529.1| Putative ATP-dependent RNA helicase DDX47 [Macaca mulatta]
gi|355785916|gb|EHH66099.1| Putative ATP-dependent RNA helicase DDX47 [Macaca fascicularis]
gi|380786753|gb|AFE65252.1| putative ATP-dependent RNA helicase DDX47 isoform 1 [Macaca
mulatta]
gi|383418889|gb|AFH32658.1| putative ATP-dependent RNA helicase DDX47 isoform 1 [Macaca
mulatta]
Length = 455
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 251/400 (62%), Positives = 315/400 (78%), Gaps = 14/400 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 235 VEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +
Sbjct: 355 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLAERVAEAQRFARMEL 414
Query: 369 KDSGNKRRRK---GGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 415 REHGEKKKRSREDAGDNDDTEG-AIGVRNKVAGGKMKKRK 453
>gi|20149629|ref|NP_057439.2| probable ATP-dependent RNA helicase DDX47 isoform 1 [Homo sapiens]
gi|52782792|sp|Q9H0S4.1|DDX47_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX47; AltName:
Full=DEAD box protein 47
gi|12052856|emb|CAB66601.1| hypothetical protein [Homo sapiens]
gi|45786091|gb|AAH68009.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Homo sapiens]
gi|117645464|emb|CAL38198.1| hypothetical protein [synthetic construct]
gi|119616683|gb|EAW96277.1| hCG2044052 [Homo sapiens]
gi|119616687|gb|EAW96281.1| hCG27698, isoform CRA_a [Homo sapiens]
gi|193785403|dbj|BAG54556.1| unnamed protein product [Homo sapiens]
Length = 455
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 251/400 (62%), Positives = 315/400 (78%), Gaps = 14/400 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 235 VEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +
Sbjct: 355 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMEL 414
Query: 369 KDSGNKRRRK---GGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 415 REHGEKKKRSREDAGDNDDTEG-AIGVRNKVAGGKMKKRK 453
>gi|109095724|ref|XP_001086352.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 3
[Macaca mulatta]
Length = 455
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 251/400 (62%), Positives = 315/400 (78%), Gaps = 14/400 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 235 VEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +
Sbjct: 355 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLAERVAEAQRFARMEL 414
Query: 369 KDSGNKRRRK---GGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 415 REHGEKKKRSREDAGDNDDTEG-AIGVRNKVAGGKMKKRK 453
>gi|39644716|gb|AAH09379.2| DDX47 protein, partial [Homo sapiens]
Length = 450
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 251/400 (62%), Positives = 315/400 (78%), Gaps = 14/400 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 56 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 109
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 110 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMD 169
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 170 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 229
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 230 VEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 289
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 290 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 349
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +
Sbjct: 350 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMEL 409
Query: 369 KDSGNKRRRK---GGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 410 REHGEKKKRSREDAGDNDDTEG-AIGVRNKVAGGKMKKRK 448
>gi|397474910|ref|XP_003808899.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Pan paniscus]
Length = 455
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 251/400 (62%), Positives = 315/400 (78%), Gaps = 14/400 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 235 VEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +
Sbjct: 355 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMEL 414
Query: 369 KDSGNKRRRK---GGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 415 REHGEKKKRSREDAGDNDDTEG-AIGVRNKVAGGKMKKRK 453
>gi|403286623|ref|XP_003934579.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Saimiri
boliviensis boliviensis]
Length = 547
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 251/400 (62%), Positives = 315/400 (78%), Gaps = 14/400 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 153 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 206
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 207 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMD 266
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 267 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 326
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 327 VEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 386
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 387 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 446
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +
Sbjct: 447 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVAEAQRFARMEL 506
Query: 369 KDSGNKRRRK---GGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 507 REHGEKKKRPREDAGDNDDTEG-AIGVRNKVAGGKMKKRK 545
>gi|426371741|ref|XP_004052800.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Gorilla gorilla gorilla]
Length = 455
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 251/400 (62%), Positives = 315/400 (78%), Gaps = 14/400 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 235 VEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +
Sbjct: 355 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMEL 414
Query: 369 KDSGNKRRRK---GGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 415 REHGEKKKRSREDAGDNDDTEG-AIGVRNKVAGGKMKKRK 453
>gi|16549139|dbj|BAB70762.1| unnamed protein product [Homo sapiens]
Length = 455
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 251/400 (62%), Positives = 315/400 (78%), Gaps = 14/400 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 235 VEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +
Sbjct: 355 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMEL 414
Query: 369 KDSGNKRRRK---GGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 415 REHGEKKKRSREDAGDNDDTEG-AIGVRNKVAGGKMKKRK 453
>gi|344266640|ref|XP_003405388.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Loxodonta
africana]
Length = 461
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 252/400 (63%), Positives = 315/400 (78%), Gaps = 14/400 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 67 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 120
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 121 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMD 180
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 181 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 240
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S MVF TC+ T+ AL+LRNLG AIP+
Sbjct: 241 VEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMVFCSTCNNTQRTALLLRNLGFTAIPLH 300
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 301 GQMSQTKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 360
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+ V QY++E + +IE LIGKKLP FP ++EEV++L ERV EA+R ++M +
Sbjct: 361 ARAGRSGKSITFVTQYDVELFQRIEHLIGKKLPVFPTQDEEVMMLTERVAEAQRFARMEL 420
Query: 369 KDSGNKRRRK---GGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 421 REHGEKKKRSREDAGDNDDTEG-AIGVRNKVAGGKMKKRK 459
>gi|402885238|ref|XP_003906071.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Papio anubis]
Length = 455
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 251/400 (62%), Positives = 315/400 (78%), Gaps = 14/400 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 235 VEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +
Sbjct: 355 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLAERVAEAQRFARMEL 414
Query: 369 KDSGNKRRRK---GGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 415 REHGEKKKRSREDAGDNDDTEG-AIGVRNKVAGGKMKKRK 453
>gi|56119032|ref|NP_001007854.1| probable ATP-dependent RNA helicase DDX47 [Gallus gallus]
gi|53130308|emb|CAG31483.1| hypothetical protein RCJMB04_6o10 [Gallus gallus]
Length = 453
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/376 (64%), Positives = 306/376 (81%), Gaps = 6/376 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPILQALL+ + FA VL+PTRELA QISEQFEA
Sbjct: 62 GRDIIGLAETGSGKTGAFALPILQALLDAPQR------LFALVLTPTRELAFQISEQFEA 115
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I + AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LK+LV+D
Sbjct: 116 LGSSIGVHSAVIVGGIDSMSQSLALAKKPHIIIATPGRLVDHLENTKGFNLRALKFLVMD 175
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTK+V+KLQRA LKNPVK +SKY T
Sbjct: 176 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKQVQKLQRAALKNPVKCAVSSKYQT 235
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 236 VEKLQQYYIFIPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 295
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRLG+LNKFKA +IL+ TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 296 GQMSQNKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRT 355
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+ V QY++E + +IE LIGKKLP FP +EEEV++L ERV EA+R ++M +
Sbjct: 356 ARAGRSGKSITFVTQYDVELFQRIEHLIGKKLPAFPMQEEEVMMLTERVAEAQRFARMEL 415
Query: 369 KDSGNKRRRKGGDEDD 384
++ G K+R + D+DD
Sbjct: 416 REQGEKKRSRNADDDD 431
>gi|326911793|ref|XP_003202240.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Meleagris gallopavo]
Length = 447
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/376 (64%), Positives = 307/376 (81%), Gaps = 6/376 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPILQALL+ + FA VL+PTRELA QISEQFEA
Sbjct: 56 GRDIIGLAETGSGKTGAFALPILQALLDAPQR------LFALVLTPTRELAFQISEQFEA 109
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I + AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LK+LV+D
Sbjct: 110 LGSSIGVHSAVIVGGIDSMSQSLALAKKPHIIIATPGRLVDHLENTKGFNLRALKFLVMD 169
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTK+V+KLQRA LKNPVK +SKY T
Sbjct: 170 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKQVQKLQRAALKNPVKCAVSSKYQT 229
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S MVF TC+ T+ AL+LRNLG AIP+
Sbjct: 230 VEKLQQYYIFIPSKFKDSYLVYILNELAGNSFMVFCSTCNNTQRTALLLRNLGFTAIPLH 289
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRLG+LNKFKA +IL+ TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 290 GQMSQNKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRT 349
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+ V QY++E + +IE LIGKKLP FP +EEEV++L ERV EA+R ++M +
Sbjct: 350 ARAGRSGKSITFVTQYDVELFQRIEHLIGKKLPAFPMQEEEVMMLQERVAEAQRFARMEL 409
Query: 369 KDSGNKRRRKGGDEDD 384
++ G K+R + GD+DD
Sbjct: 410 REQGEKKRSRNGDDDD 425
>gi|332232745|ref|XP_003265564.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Nomascus
leucogenys]
Length = 455
Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust.
Identities = 250/400 (62%), Positives = 315/400 (78%), Gaps = 14/400 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PH+++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 235 VEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +
Sbjct: 355 ARAGRSGKAITFVTQYDVELFQRIEYLIGKKLPVFPTQDDEVMMLTERVAEAQRFARMEL 414
Query: 369 KDSGNKRRRK---GGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 415 REHGEKKKRSREDAGDNDDTEG-AIGVRNKVAGGKMKKRK 453
>gi|449481708|ref|XP_002195464.2| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Taeniopygia
guttata]
Length = 450
Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/384 (63%), Positives = 310/384 (80%), Gaps = 8/384 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPILQALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDVIGLAETGSGKTGAFALPILQALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ V+VGG+D M Q+LAL K+PH+++ATPGRL+DHL NTKGF+L LK+LV+D
Sbjct: 115 LGSSIGVQTTVIVGGIDTMSQSLALAKKPHVIIATPGRLVDHLENTKGFNLRALKFLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 235 VEKLQQYYIFIPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRLG+LNKFKA +IL+ TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMSQNKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+ V QY++E + +IE LIGKKLP FP +EEEV++L ERV EA+R+++M +
Sbjct: 355 ARAGRSGKSITFVTQYDVELFQRIEHLIGKKLPAFPMQEEEVMMLTERVAEAQRLARMEL 414
Query: 369 KDSGNKRRRKGGDEDDDIGRQFGI 392
++ G K+R + ++DDD G+
Sbjct: 415 REQGEKKRSR--NDDDDTEEAIGV 436
>gi|432107717|gb|ELK32877.1| Putative ATP-dependent RNA helicase DDX47 [Myotis davidii]
Length = 455
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 250/400 (62%), Positives = 316/400 (79%), Gaps = 14/400 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PH+V+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQTAVIVGGIDSMSQSLALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LK+PVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKDPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 235 VEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+ V QY++E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +
Sbjct: 355 ARAGRSGKSITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMEL 414
Query: 369 KDSGNKRRR---KGGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 415 REHGEKKKRTREDAGDNDDTEG-AMGVRNKVAGGKMKKRK 453
>gi|302833407|ref|XP_002948267.1| hypothetical protein VOLCADRAFT_31305 [Volvox carteri f.
nagariensis]
gi|300266487|gb|EFJ50674.1| hypothetical protein VOLCADRAFT_31305 [Volvox carteri f.
nagariensis]
Length = 410
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 259/381 (67%), Positives = 318/381 (83%), Gaps = 11/381 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLAQTGSGKTGAF+LPILQAL+E + FA +LSPTRELAIQI+EQ EA
Sbjct: 36 GQDVIGLAQTGSGKTGAFSLPILQALMERPQEH------FALILSPTRELAIQIAEQVEA 89
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI ++CAVLVGG+DMM Q +AL KRPHI+V TPGR++DHL+NTKGF+L LK+LVLD
Sbjct: 90 LGSGIGVKCAVLVGGIDMMAQAIALAKRPHILVGTPGRVVDHLSNTKGFNLKQLKHLVLD 149
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD+LL+ DFE+ +D+IL VIPR R+T LFSATMT KV+KLQRACL PVK+E A+KYST
Sbjct: 150 EADKLLDMDFEQEIDQILKVIPRDRRTQLFSATMTNKVQKLQRACLVRPVKVEVAAKYST 209
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+TL+QQY F+PAKYKDCYL Y+L E+S S+ M+FTRTC++TR +ALMLRNLG A+PI
Sbjct: 210 VETLRQQYVFIPAKYKDCYLAYVLNELSGSTFMIFTRTCESTRRIALMLRNLGFGAVPIH 269
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
GHMSQ KRLGALNKFKAGE +IL TDVASRGLDIPSVD+VINYD NSKDYIHRVGRT
Sbjct: 270 GHMSQPKRLGALNKFKAGERSILAATDVASRGLDIPSVDVVINYD---NSKDYIHRVGRT 326
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G ++++V QY++E + +IE L G K+ +F AE EEVLLLLERV++A+R++ M +
Sbjct: 327 ARAGRSGRSVTIVTQYDVELFQKIEHLTGVKMEQFQAEREEVLLLLERVSDAQRLAAMQM 386
Query: 369 K--DSGNKRRRKGGDEDDDIG 387
K D+G K +RKG D DD+ G
Sbjct: 387 KEADAGKKGKRKGEDGDDEGG 407
>gi|117646246|emb|CAL38590.1| hypothetical protein [synthetic construct]
gi|208967637|dbj|BAG72464.1| apolipoprotein L domain containing 1 [synthetic construct]
Length = 455
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 250/400 (62%), Positives = 314/400 (78%), Gaps = 14/400 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TG GKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGPGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 235 VEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +
Sbjct: 355 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMEL 414
Query: 369 KDSGNKRRRK---GGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 415 REHGEKKKRSREDAGDNDDTEG-AIGVRNKVAGGKMKKRK 453
>gi|355683299|gb|AER97081.1| DEAD box polypeptide 47 [Mustela putorius furo]
Length = 454
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 249/400 (62%), Positives = 315/400 (78%), Gaps = 14/400 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 60 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 113
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PH+++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 114 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMD 173
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 174 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 233
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S ++F TC+ T+ AL+LRNLG AIP+
Sbjct: 234 VEKLQQYYLFIPSKFKDTYLVYILNELAGNSFIIFCSTCNNTQRTALLLRNLGFTAIPLH 293
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 294 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 353
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +
Sbjct: 354 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVNEAQRFARMEL 413
Query: 369 KDSGNKRRRK---GGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 414 REHGEKKKRSREDAGDNDDTEG-AMGVRNKVAGGKMKKRK 452
>gi|196000560|ref|XP_002110148.1| hypothetical protein TRIADDRAFT_21567 [Trichoplax adhaerens]
gi|190588272|gb|EDV28314.1| hypothetical protein TRIADDRAFT_21567, partial [Trichoplax
adhaerens]
Length = 424
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 243/376 (64%), Positives = 309/376 (82%), Gaps = 6/376 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKT AF LPILQALL+ + QR FA +L+PTRELA QISEQ EA
Sbjct: 32 GKDIIGLAETGSGKTAAFVLPILQALLD--KPQR----LFALILTPTRELAFQISEQIEA 85
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV++GG+DMM Q++ L K+PHI++ TPGRL DHL NTKGFSL LKYLV+D
Sbjct: 86 LGSSIGVQCAVIIGGIDMMTQSIMLAKKPHIIIGTPGRLADHLANTKGFSLRPLKYLVMD 145
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL+V+P+ R+TYLFSATMTKKVKKLQRA +++PVKIE ++KY+T
Sbjct: 146 EADRILNMDFEAEVDKILSVLPKERRTYLFSATMTKKVKKLQRASVQDPVKIEVSTKYTT 205
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y FVPAKYKDCYLV IL E++ +S MVF TC T+ + LMLRNLG AIP+
Sbjct: 206 VEKLQQTYIFVPAKYKDCYLVSILNELAGNSFMVFCATCINTQRIGLMLRNLGFNAIPLH 265
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLGAL+KFK+ E +IL+ TDVASRGLDIP VD+VIN+D P++SKDYIHRVGRT
Sbjct: 266 GQMSQSKRLGALHKFKSKESSILVATDVASRGLDIPHVDIVINFDAPSHSKDYIHRVGRT 325
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I V QY++E + +IE+LI KKLPE+P EEEV+LL+ERV EA+R ++M +
Sbjct: 326 ARAGRSGRSIIFVTQYDVELFQRIEQLIAKKLPEYPTVEEEVMLLMERVAEAQRYAKMEL 385
Query: 369 KDSGNKRRRKGGDEDD 384
+++ NK+RR DE++
Sbjct: 386 QETMNKKRRPLDDEEE 401
>gi|62897439|dbj|BAD96660.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 variant [Homo
sapiens]
Length = 448
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 250/400 (62%), Positives = 314/400 (78%), Gaps = 14/400 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 54 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 107
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 108 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMD 167
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL V PR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 168 EADRILNMDFETEVDKILKVNPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 227
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 228 VEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 287
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 288 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 347
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +
Sbjct: 348 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMEL 407
Query: 369 KDSGNKRRRK---GGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 408 REHGEKKKRSREDAGDNDDTEG-AIGVRNKVAGGKMKKRK 446
>gi|442762935|gb|JAA73626.1| Putative atp-dependent rna helicase, partial [Ixodes ricinus]
Length = 429
Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/365 (66%), Positives = 298/365 (81%), Gaps = 6/365 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTG+FALPILQALLE + FA VL+PTRELA QISEQFEA
Sbjct: 62 GKDVIGLAETGSGKTGSFALPILQALLETPQR------LFALVLTPTRELAFQISEQFEA 115
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+GI ++CAV+VGG+DMM Q L L K+PH+V+ATPGRL+DHL NTKGFSL LKYLV+D
Sbjct: 116 LGAGIGVKCAVVVGGIDMMTQALTLAKKPHVVIATPGRLVDHLENTKGFSLKALKYLVMD 175
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE+ +D+IL VIPR R TYL+SATMTKKV+KLQRA LK+PVK+E +SKY T
Sbjct: 176 EADRILNMDFEEEVDKILRVIPRERHTYLYSATMTKKVQKLQRASLKDPVKVEVSSKYQT 235
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L Q Y F+PAK+KD YLV++L E++ +S MVF TC T+ AL+LRNLG AIP+
Sbjct: 236 VEKLMQYYLFIPAKFKDVYLVHLLNELAGNSFMVFCSTCSNTQRTALLLRNLGFTAIPLH 295
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M Q+KRLGALNKFK+ +ILI TDVASRGLDIP VD V+N+DIPT+SKDYIHRVGRT
Sbjct: 296 GQMGQAKRLGALNKFKSKNRSILIATDVASRGLDIPHVDCVVNFDIPTHSKDYIHRVGRT 355
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E Y +IE LIGKKLP + EEEV++L+ERVTEA+R ++M +
Sbjct: 356 ARAGRSGKAITFVTQYDVELYQRIEHLIGKKLPLYQTSEEEVMVLMERVTEAQRFAKMEL 415
Query: 369 KDSGN 373
K+ +
Sbjct: 416 KEQDD 420
>gi|340719056|ref|XP_003397973.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Bombus
terrestris]
Length = 458
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 245/393 (62%), Positives = 313/393 (79%), Gaps = 12/393 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKT AFA+PILQALLE QR +FA +L+PTRELA QISEQFEA
Sbjct: 60 GKDIIGLAETGSGKTAAFAIPILQALLE--NPQR----YFALILTPTRELAFQISEQFEA 113
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+DMM Q L L K+PHI++ATPGRL+DHL NTKGF+L +LK+LV+D
Sbjct: 114 LGSSIGVKCAVIVGGMDMMSQALLLAKKPHILIATPGRLVDHLENTKGFNLRSLKFLVMD 173
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T LFSATMTKKV+KLQRA L+NPVK+E ++KY T
Sbjct: 174 EADRILNMDFEVEVDKILRVIPRERRTLLFSATMTKKVQKLQRASLRNPVKVEVSTKYQT 233
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P K+KD YLV+IL E++ +S M+F TC+ T AL+LRNLG A+P+
Sbjct: 234 VEKLQQYYVFIPVKFKDVYLVHILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPLH 293
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KR+ AL KFKA +ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 294 GQMSQNKRIAALTKFKAKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRT 353
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+ V QY++E Y +IE+LI K+LP +P EEEEV++L ERV EA+RI +M +
Sbjct: 354 ARAGRSGRSITFVTQYDVELYQRIEQLISKQLPLYPTEEEEVMVLQERVAEAQRIVKMEM 413
Query: 369 KDS------GNKRRRKGGDEDDDIGRQFGINKK 395
KD G +++R+ +EDDD + G+ K+
Sbjct: 414 KDIEDSKKLGKRKKRQDDNEDDDTEQSMGVRKR 446
>gi|405964769|gb|EKC30218.1| Putative ATP-dependent RNA helicase DDX47 [Crassostrea gigas]
Length = 1146
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 249/371 (67%), Positives = 304/371 (81%), Gaps = 8/371 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLA+TGSGKTGAFALPILQ LL+ + QR +A VL+PTRELA QISEQFEA
Sbjct: 76 GSDVIGLAETGSGKTGAFALPILQTLLD--KPQR----LYALVLTPTRELAFQISEQFEA 129
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ I ++CAV+VGG+DMM Q+L L K+PHIV+ATPGRL+DHL NTKGF+L +LKYLV+D
Sbjct: 130 LGASIGIKCAVIVGGIDMMTQSLMLAKKPHIVIATPGRLVDHLENTKGFNLRSLKYLVMD 189
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE+ +D+IL IPR R T LFSATMTKKV KLQRA L+NPV++E +SKY T
Sbjct: 190 EADRILNMDFEQEVDKILKAIPRERNTLLFSATMTKKVAKLQRASLQNPVRVEVSSKYQT 249
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD L+Q Y F+P K+KD YLVYIL E++ +S MVF TC T+ +ALMLRNLG AIP+
Sbjct: 250 VDKLQQYYLFIPVKFKDVYLVYILNELAGNSFMVFCSTCANTQRVALMLRNLGLTAIPLH 309
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLGALNKFK+ +ILI TDVASRGLDIP VD+V+N DIPT+SKDYIHRVGRT
Sbjct: 310 GQMSQSKRLGALNKFKSKNRSILIATDVASRGLDIPHVDVVLNLDIPTHSKDYIHRVGRT 369
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+GVAI+ V+QY++E Y +IE LIGKKLP + EEEEV+ L+ERVTEA+R ++M +
Sbjct: 370 ARAGRSGVAITFVSQYDVELYQRIEHLIGKKLPLYKTEEEEVMQLMERVTEAQRYAKMEM 429
Query: 369 KDS--GNKRRR 377
+S G K+RR
Sbjct: 430 NESERGRKKRR 440
>gi|145352866|ref|XP_001420755.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580990|gb|ABO99048.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 466
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 244/390 (62%), Positives = 307/390 (78%), Gaps = 9/390 (2%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IGLAQTGSGKTGAFALPILQ+LL+ + F + +LSPTRELA+QI+EQ E L
Sbjct: 56 RDVIGLAQTGSGKTGAFALPILQSLLDAPQ------GFHSLILSPTRELAMQIAEQIETL 109
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
G+G+ R A LVGGVDM Q + LGKRPH++V TPGR++DHL NTKGFSL LK LVLDE
Sbjct: 110 GAGVGARTATLVGGVDMTTQAIKLGKRPHVIVGTPGRVVDHLENTKGFSLRALKVLVLDE 169
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADRLLN DFE+ +D+IL VIP R+T LFSATMT KV KLQRACL++PVK+E ++KYSTV
Sbjct: 170 ADRLLNLDFEEEIDKILRVIPSDRRTQLFSATMTNKVAKLQRACLRDPVKVEVSAKYSTV 229
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
++LKQ Y F+PAK+KDCY Y+ E+SAS+ +VF RTCDATR LAL+ RNLG A+PI G
Sbjct: 230 ESLKQHYLFIPAKHKDCYATYLFNELSASTLIVFARTCDATRKLALIARNLGFGAVPIHG 289
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
MSQ KR+ AL KFK+GE NILI TDVASRGLDIPSVD+VINYD+P NSKDY+HRVGRTA
Sbjct: 290 QMSQPKRIAALQKFKSGERNILIATDVASRGLDIPSVDVVINYDVPQNSKDYVHRVGRTA 349
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK 369
RAGR+G+A+++V QY++E Y +IE+LI KKL ++P EEE V+LL +RV EA+RI+ ++
Sbjct: 350 RAGRSGLAVTMVTQYDVELYQKIERLINKKLDKYPLEEEAVMLLYDRVNEAQRIAIQQMR 409
Query: 370 DSGNKR---RRKGGDEDDDIGRQFGINKKK 396
D ++ ++G +DDD + I KK
Sbjct: 410 DQDERKGKGAKRGFKDDDDADKMLNILGKK 439
>gi|125601387|gb|EAZ40963.1| hypothetical protein OsJ_25445 [Oryza sativa Japonica Group]
Length = 414
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 241/378 (63%), Positives = 306/378 (80%), Gaps = 5/378 (1%)
Query: 2 LLWFCDAGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQ 61
++ F G+D+IG+ QTGSGKT AFALPI+QALLE P FFACVL+PTRELAIQ
Sbjct: 13 VIPFALQGRDVIGVGQTGSGKTAAFALPIIQALLEHEHR----PCFFACVLAPTRELAIQ 68
Query: 62 ISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGT 121
I++QFEALGS ISL+C+VL+GG+ QT++L KRPH+VV TPGRL+DHLTNTKGFS
Sbjct: 69 IAKQFEALGSAISLQCSVLIGGIPRTSQTISLAKRPHVVVGTPGRLLDHLTNTKGFSFNK 128
Query: 122 LKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE 181
LKYLVLDEAD LL DF+K++D+ILNVIP+ R+T+LFSATMT+KVKKL+RACLKNPVK+E
Sbjct: 129 LKYLVLDEADDLLKVDFQKAVDDILNVIPKERRTFLFSATMTEKVKKLRRACLKNPVKVE 188
Query: 182 AASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLG 241
ASKYS VDTL+Q VPAKYKDCYL+++L ++ S MVF RTC++TRLLALMLRNL
Sbjct: 189 VASKYSLVDTLRQDLYVVPAKYKDCYLIHVLNKMPGSMIMVFVRTCESTRLLALMLRNLR 248
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+AI ISG MSQ KRLGALN+F+ +CNIL+CTDVASRGLDI VD+VINYD P NSKDY
Sbjct: 249 FKAISISGQMSQDKRLGALNRFRTRDCNILVCTDVASRGLDIQGVDVVINYDFPLNSKDY 308
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLI-GKKLPEFPAEEEEVLLLLERVTEA 360
IHRVGRTARAG++G A+SLVNQ+E E++ E+ + G+++P + +E+++L ER+ ++
Sbjct: 309 IHRVGRTARAGQSGYAVSLVNQFEGEFFKLTEQFLGGEEIPARKVDADEIMILHERIYDS 368
Query: 361 KRISQMTIKDSGNKRRRK 378
KRI+ T+ +SG +R +
Sbjct: 369 KRIALKTMNESGYHKRMR 386
>gi|441477761|dbj|BAM75193.1| vasa-like gene-2, partial [Pinctada fucata]
Length = 451
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/364 (66%), Positives = 299/364 (82%), Gaps = 6/364 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLA+TGSGKTGAFA+PILQ LL+ QR +A +L+PTRELA QISEQFEA
Sbjct: 59 GSDIIGLAETGSGKTGAFAIPILQKLLD--SPQR----LYALILTPTRELAFQISEQFEA 112
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+DMM Q+L L K+PHI++ATPGRL+DHL NTKGF+L LK+LV+D
Sbjct: 113 LGSAIGVKCAVVVGGIDMMSQSLMLAKKPHIIIATPGRLIDHLENTKGFNLRALKFLVMD 172
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE+ +D+IL VIPR R TYL+SATMTKKV KLQRA L+NPVK+E +SKY T
Sbjct: 173 EADRILNMDFEQEVDKILKVIPRERSTYLYSATMTKKVAKLQRASLQNPVKVEVSSKYQT 232
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD L+Q Y FVPAK+KD YLV +L E++ +S MVFT TC T+ ALMLRNLG AIP+
Sbjct: 233 VDKLQQYYLFVPAKFKDVYLVSVLNELAGNSFMVFTSTCANTQRTALMLRNLGLTAIPLH 292
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFK+ +ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 293 GQMSQSKRLGSLNKFKSKSRSILIATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRT 352
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V+QY++E Y +IE LIGKKLP + EE+EV+ L+ERVTEA+R ++M +
Sbjct: 353 ARAGRSGKAITFVSQYDVELYQRIEHLIGKKLPLYKTEEQEVMQLMERVTEAQRYAKMEM 412
Query: 369 KDSG 372
+S
Sbjct: 413 SESS 416
>gi|159465205|ref|XP_001690813.1| predicted protein [Chlamydomonas reinhardtii]
gi|158279499|gb|EDP05259.1| predicted protein [Chlamydomonas reinhardtii]
Length = 446
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 251/373 (67%), Positives = 313/373 (83%), Gaps = 8/373 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D+IGLAQTGSGKTGAF+LPILQAL++ + FA +LSPTRELAIQI+EQ E
Sbjct: 53 AGQDVIGLAQTGSGKTGAFSLPILQALMDKPQEH------FALILSPTRELAIQIAEQVE 106
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
ALGSGI ++ VLVGG+DMM Q +AL KRPH++V TPGR++DHL+NTKGFSL LK+LVL
Sbjct: 107 ALGSGIGVKSCVLVGGIDMMAQAIALAKRPHVLVGTPGRVVDHLSNTKGFSLKQLKHLVL 166
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEAD+LL+ DFE+ +D+IL VIPR R+T LFSATMT KV+KLQRACL PVKIE A KYS
Sbjct: 167 DEADKLLDMDFEQEIDQILKVIPRERRTQLFSATMTNKVQKLQRACLDKPVKIEVAHKYS 226
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL+QQY F+PAKYKDCYL Y++ E+S S+ M+FTRTC++TR +AL+LRNLG A+PI
Sbjct: 227 TVDTLRQQYVFIPAKYKDCYLAYVINELSGSTFMIFTRTCESTRRIALLLRNLGFGAVPI 286
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
GHMSQ KRLGALNKFK+GE NIL+ TDVASRGLDIPSVD+VIN+D+P NSKDY+HRVGR
Sbjct: 287 HGHMSQPKRLGALNKFKSGERNILVATDVASRGLDIPSVDVVINFDVPQNSKDYVHRVGR 346
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAGR+G ++++V QY++E + +IE L G K+ +F AE EEVLLLLERV++A+R++ M
Sbjct: 347 TARAGRSGRSVTIVTQYDVELFQKIEHLTGVKMEQFQAEREEVLLLLERVSDAQRLATMQ 406
Query: 368 IK--DSGNKRRRK 378
+K D+G K +RK
Sbjct: 407 MKEADAGKKGKRK 419
>gi|66472376|ref|NP_001018522.1| probable ATP-dependent RNA helicase DDX47 [Danio rerio]
gi|63102032|gb|AAH95776.1| Zgc:112350 [Danio rerio]
Length = 512
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 241/389 (61%), Positives = 314/389 (80%), Gaps = 8/389 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFA+P+LQ+LL A+ T+ VL+PTRELA QI+EQF+A
Sbjct: 116 GRDVIGLAETGSGKTGAFAVPVLQSLLACAQRLHTL------VLTPTRELAFQIAEQFDA 169
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+DMM Q L L K+PH+V+ATPGRL+DH+ NTKGF+L LKYLV+D
Sbjct: 170 LGSSIGVKTAVIVGGIDMMSQALVLAKKPHVVIATPGRLIDHMENTKGFNLRALKYLVMD 229
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA L++PVK +SKY+T
Sbjct: 230 EADRILNMDFESEVDKILKVIPRDRRTFLFSATMTKKVQKLQRAALQDPVKCSVSSKYAT 289
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD L+Q Y F+P+KYKDCYLV IL E++ +S MVF TC+ T+ +AL+LRNLG AIP+
Sbjct: 290 VDKLQQFYIFIPSKYKDCYLVSILNELAGNSFMVFCGTCNNTQRVALLLRNLGITAIPLH 349
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRLGALNKFK+ ++L+ TDVASRGLDIP VD VIN+DIPT+SKDYIHRVGRT
Sbjct: 350 GQMSQNKRLGALNKFKSKSRSVLLATDVASRGLDIPHVDCVINFDIPTHSKDYIHRVGRT 409
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+ V QY++E + +IE LIGKKLP FP +EEEV++L+ERV+EA+R +++ +
Sbjct: 410 ARAGRSGKSITFVTQYDVELFQRIEALIGKKLPAFPTQEEEVMMLVERVSEAQRFARIEM 469
Query: 369 KDSGNKRRRKGGDE--DDDIGRQFGINKK 395
K+S KR+R + D+D + G+ KK
Sbjct: 470 KESSEKRKRPSAAQEVDEDGEQSSGVRKK 498
>gi|350398997|ref|XP_003485378.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Bombus
impatiens]
Length = 453
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 246/399 (61%), Positives = 315/399 (78%), Gaps = 12/399 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKT AFA+PILQALLE QR +FA +L+PTRELA QISEQFEA
Sbjct: 55 GKDVIGLAETGSGKTAAFAIPILQALLE--NPQR----YFALILTPTRELAFQISEQFEA 108
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+DMM Q L L K+PHI++ATPGRL+DHL NTKGF+L +LK+LV+D
Sbjct: 109 LGSSIGVKCAVIVGGMDMMSQALLLAKKPHILIATPGRLVDHLENTKGFNLRSLKFLVMD 168
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T LFSATMTKKV+KLQRA L+NPVK+E ++KY T
Sbjct: 169 EADRILNMDFEVEVDKILRVIPRERRTLLFSATMTKKVQKLQRASLRNPVKVEVSTKYQT 228
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P K+KD YLV+IL E++ +S M+F TC+ T AL+LRNLG A+P+
Sbjct: 229 VEKLQQYYIFIPVKFKDVYLVHILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPLH 288
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KR+ AL KFKA +ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 289 GQMSQNKRIAALTKFKAKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRT 348
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+ V QY++E Y +IE+LI K+LP +P EEEEV++L ERV EA+RI +M +
Sbjct: 349 ARAGRSGRSITFVTQYDVELYQRIEQLISKQLPLYPTEEEEVMVLQERVAEAQRIVKMEM 408
Query: 369 KDS------GNKRRRKGGDEDDDIGRQFGINKKKLSKRK 401
KD G +++R+ +E+DD + G+ K+ K K
Sbjct: 409 KDIEDSKKLGKRKKRQDDNEEDDTEQSMGVRKRIKGKNK 447
>gi|301610482|ref|XP_002934775.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Xenopus (Silurana) tropicalis]
Length = 448
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/367 (65%), Positives = 304/367 (82%), Gaps = 6/367 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPILQ LLE + +A VL+PTRELA QISEQFEA
Sbjct: 56 GRDIIGLAETGSGKTGAFALPILQTLLESPQR------LYALVLTPTRELAFQISEQFEA 109
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+DMM Q+LAL K+PH+V+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 110 LGSTIGVKSAVIVGGIDMMSQSLALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMD 169
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LK+PVK +SKY T
Sbjct: 170 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKDPVKCAVSSKYQT 229
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ +AL+LRNLG AIP+
Sbjct: 230 VEKLQQFYVFIPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRVALLLRNLGFTAIPLH 289
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRLG+LNKFKA +IL+ TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 290 GQMSQNKRLGSLNKFKAKSRSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRT 349
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V+QY++E + +IE LIGKKLP FP +EEEV++L ERV+EA+R +++ +
Sbjct: 350 ARAGRSGKAITFVSQYDVELFQRIEHLIGKKLPAFPTQEEEVMMLNERVSEAQRFARIEL 409
Query: 369 KDSGNKR 375
++ G K+
Sbjct: 410 REHGEKK 416
>gi|384252067|gb|EIE25544.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 415
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 249/358 (69%), Positives = 303/358 (84%), Gaps = 6/358 (1%)
Query: 11 DLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALG 70
D+IGLAQTGSGKTGAFA+PILQ LL+ T A FA VLSPTRELA+QI+EQFEALG
Sbjct: 51 DVIGLAQTGSGKTGAFAMPILQELLD------TPQANFALVLSPTRELALQIAEQFEALG 104
Query: 71 SGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEA 130
+GI +RCAVLVGG+DMM Q +ALGKRPHI+V TPGR++DHL+NTKGF+L L++LVLDEA
Sbjct: 105 AGIGVRCAVLVGGIDMMAQAIALGKRPHIIVGTPGRVVDHLSNTKGFTLKALRHLVLDEA 164
Query: 131 DRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVD 190
DRLLN DFE+ +D+IL VIPR R+T LFSATMT KV KLQRACL+NPVK+E +KY TVD
Sbjct: 165 DRLLNMDFEQEIDQILKVIPRERRTQLFSATMTTKVAKLQRACLQNPVKVEVDAKYRTVD 224
Query: 191 TLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGH 250
TL+QQY F+PAK+KDCYL Y LTE++ ++ MVFTRTCD TR LALMLRNLG A+PI G
Sbjct: 225 TLRQQYLFIPAKHKDCYLAYFLTELAGATFMVFTRTCDNTRKLALMLRNLGFDALPIHGQ 284
Query: 251 MSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTAR 310
MSQ KRLGALNKFKAGE +IL TDVASRGLDIP+VD+V+NYD+P NSKDY+HRVGRTAR
Sbjct: 285 MSQPKRLGALNKFKAGERSILAATDVASRGLDIPAVDVVVNYDVPINSKDYVHRVGRTAR 344
Query: 311 AGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
AGR+G +++LV QY++E + +IE L G+K+ ++ AEEE LLLLERVTEA++++ M +
Sbjct: 345 AGRSGRSLTLVTQYDVEQFQKIEALTGQKMEKYDAEEEAALLLLERVTEAQKMATMQV 402
>gi|413934953|gb|AFW69504.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 434
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 247/379 (65%), Positives = 302/379 (79%), Gaps = 25/379 (6%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDLI LAQTGSGKTGAFALPILQ LL N++ +FFACVLSPTRELAIQI+EQFEA
Sbjct: 61 GKDLIALAQTGSGKTGAFALPILQELLS---NRQAEQSFFACVLSPTRELAIQIAEQFEA 117
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I LRC+V V TPGRL+DHLT TKGFSL +KYLVLD
Sbjct: 118 LGSAIGLRCSV---------------------VGTPGRLLDHLTETKGFSLKKIKYLVLD 156
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD+LLN +FEKSLD+IL+ +P+ R+T+LFSATMTKKV KLQRACL+NP K+E +SKYST
Sbjct: 157 EADKLLNVEFEKSLDDILSEMPKDRRTFLFSATMTKKVNKLQRACLRNPAKVEVSSKYST 216
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD+LKQ++ FVPA KDCYL+++L E S M+F RTC++TRLLALMLRNLG +A+ IS
Sbjct: 217 VDSLKQEFYFVPADDKDCYLLHVLNERLESMIMIFVRTCESTRLLALMLRNLGLKAMSIS 276
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ KRLGALN+FKA +CNILICTDVASRGLDI VDMVINYDIP NSKDY+HRVGRT
Sbjct: 277 GQMSQDKRLGALNRFKAKDCNILICTDVASRGLDIQGVDMVINYDIPMNSKDYVHRVGRT 336
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G A+SLVNQYE +W++ IE+L+GKK+ + + +EVL+L +++AKRI+ +
Sbjct: 337 ARAGRSGYAVSLVNQYEAQWFVLIEQLLGKKIDQCKVDRDEVLILKGPISDAKRIALTKL 396
Query: 369 KDS-GNKRRRKGGDEDDDI 386
KDS G+K+RR GD+D+++
Sbjct: 397 KDSGGHKKRRNVGDDDEEV 415
>gi|339243967|ref|XP_003377909.1| ATP-dependent rRNA helicase Rrp3 [Trichinella spiralis]
gi|316973226|gb|EFV56846.1| ATP-dependent rRNA helicase Rrp3 [Trichinella spiralis]
Length = 496
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 245/368 (66%), Positives = 301/368 (81%), Gaps = 6/368 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKT AFALPILQALLE QR FA VL+PTRELA QI+EQFEA
Sbjct: 99 GRDVIGLAETGSGKTAAFALPILQALLE--HPQR----LFALVLTPTRELAYQIAEQFEA 152
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ I ++ AV+VGGVDM+ Q L L K+PH++VATPGRL+DHL NTKGFSL +LKYLV+D
Sbjct: 153 LGACIGIKVAVIVGGVDMVTQALCLAKKPHVIVATPGRLVDHLENTKGFSLRSLKYLVMD 212
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ DFE +++IL VIPR R+TYLFSATMTKKV KLQRA L++PVK+E +SKY T
Sbjct: 213 EADRILDMDFESEVNKILQVIPRERKTYLFSATMTKKVTKLQRASLQDPVKVEVSSKYQT 272
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD L+Q Y F+P K+KDCYLVYIL E++ S +VFT TC + AL+LRNLG A+P+
Sbjct: 273 VDKLQQHYIFIPQKFKDCYLVYILNEMAGKSCIVFTSTCANSLRTALLLRNLGFTAVPLH 332
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRLGALNKFKA + +ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 333 GQMSQAKRLGALNKFKAKDRSILIATDVASRGLDIPHVDLVINFDIPTHSKDYIHRVGRT 392
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR G++I+ V QY++E Y +IE L+GK+LP F EE EVL LLERVTEA RI++M +
Sbjct: 393 ARAGRAGISITFVTQYDVELYQRIEYLLGKQLPLFKTEEPEVLSLLERVTEANRIAKMQV 452
Query: 369 KDSGNKRR 376
K+ +K+R
Sbjct: 453 KELEDKKR 460
>gi|125559478|gb|EAZ05014.1| hypothetical protein OsI_27195 [Oryza sativa Indica Group]
Length = 414
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 240/373 (64%), Positives = 302/373 (80%), Gaps = 5/373 (1%)
Query: 5 FCDAGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISE 64
F G+D+IG+ QTGSGKT AFALPI+QALLE P F ACVL+PTRELAIQI++
Sbjct: 16 FALQGRDVIGVGQTGSGKTAAFALPIIQALLE----HEHRPRFLACVLAPTRELAIQIAK 71
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
QFEALGS ISL+C+VL+GG+ QT++L KRPH+VV TPGRL+DHLTNTKGFS LKY
Sbjct: 72 QFEALGSAISLQCSVLIGGIPRTSQTISLAKRPHVVVGTPGRLLDHLTNTKGFSFNKLKY 131
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEAD LL DF+K++D+ILNVIP+ R+T+LFSATMT+KVKKL+RACLKNPVK+E AS
Sbjct: 132 LVLDEADDLLKVDFQKAVDDILNVIPKERRTFLFSATMTEKVKKLRRACLKNPVKVEVAS 191
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
KYS VDTL+Q VPAKYKDCYL+++L ++ S MVF RTC++TRLLALMLRNL +A
Sbjct: 192 KYSLVDTLRQDLYVVPAKYKDCYLIHVLNKMPGSMIMVFVRTCESTRLLALMLRNLRFKA 251
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I ISG MSQ KRLGALN+F+ +CNIL+CTDVASRGLDI VD+VINYD P NSKDYIHR
Sbjct: 252 ISISGQMSQDKRLGALNRFRTRDCNILVCTDVASRGLDIQGVDVVINYDFPLNSKDYIHR 311
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLI-GKKLPEFPAEEEEVLLLLERVTEAKRI 363
VGRTARAG++G A+SLVNQ+E E++ E+ + G+++P + +E+++L ER+ ++KRI
Sbjct: 312 VGRTARAGQSGYAVSLVNQFEGEFFKLTEQFLGGEEIPARKVDADEIMILHERIYDSKRI 371
Query: 364 SQMTIKDSGNKRR 376
+ T+ +SG +R
Sbjct: 372 ALKTMNESGYHKR 384
>gi|193683600|ref|XP_001951837.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Acyrthosiphon pisum]
Length = 450
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 243/392 (61%), Positives = 315/392 (80%), Gaps = 8/392 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFA+PILQALLE QR +FA +L+PTRELA QISEQ EA
Sbjct: 56 GKDIIGLAETGSGKTGAFAIPILQALLE--NPQR----YFALILTPTRELAFQISEQIEA 109
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+DMM Q+L L K+PHI++ATPGRL+DHL NTKGFSL LK LV+D
Sbjct: 110 LGSSIGVKCAVIVGGMDMMAQSLMLAKKPHIIIATPGRLVDHLENTKGFSLRNLKVLVMD 169
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE+ +D+IL VIPR R+T+LFSATMTKKV+KL RA L +PV++E ++K+ T
Sbjct: 170 EADRILNMDFEEEVDKILKVIPRERRTFLFSATMTKKVQKLHRASLVDPVRVEVSTKFQT 229
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P KYKD YLV+IL E++ +S MVF TC+ T +AL+LRNLG AIP+
Sbjct: 230 VEQLQQYYIFIPVKYKDVYLVHILNEMAGNSFMVFMATCNGTVRVALLLRNLGLDAIPLH 289
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M+Q+KRL +LNKFK+ +ILI TDV+SRGLDIP VD+VIN+D+PT+SKDYIHRVGRT
Sbjct: 290 GQMTQNKRLASLNKFKSKSRSILISTDVSSRGLDIPHVDVVINFDMPTHSKDYIHRVGRT 349
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+LV QY++E Y +IE+LI KKLP + E++EV+ L ERV+EA+R+++M +
Sbjct: 350 ARAGRSGKAITLVTQYDIELYQRIEQLISKKLPLYQVEDDEVMCLQERVSEAQRLAKMNM 409
Query: 369 KDSGNKRRRKGGDEDDDIGRQFGINKKKLSKR 400
KD G+K+ ++ D DDD G+ KK + K
Sbjct: 410 KDMGDKKGKR--DLDDDEEGAMGVRKKNIGKH 439
>gi|281349896|gb|EFB25480.1| hypothetical protein PANDA_006406 [Ailuropoda melanoleuca]
Length = 383
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 239/358 (66%), Positives = 295/358 (82%), Gaps = 6/358 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 32 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 85
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 86 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMD 145
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 146 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 205
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 206 VEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 265
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 266 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 325
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQM 366
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +E+EV++L ERVTEA+R ++M
Sbjct: 326 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQEDEVMMLTERVTEAQRFARM 383
>gi|91088115|ref|XP_969791.1| PREDICTED: similar to GA21647-PA [Tribolium castaneum]
gi|270012107|gb|EFA08555.1| hypothetical protein TcasGA2_TC006210 [Tribolium castaneum]
Length = 451
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 238/370 (64%), Positives = 303/370 (81%), Gaps = 6/370 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKT AFALPILQ+LLE QR +FA +L+PTRELA QISEQ EA
Sbjct: 56 GKDVIGLAETGSGKTAAFALPILQSLLE--NPQR----YFALILTPTRELAFQISEQIEA 109
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ I ++CAV+VGG+DMM Q L L K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 110 LGANIGVKCAVIVGGMDMMSQALILAKKPHILIATPGRLLDHLENTKGFNLKALKYLVMD 169
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R T+LFSATMTKKVKKLQRACL++PVK+E ++KY T
Sbjct: 170 EADRILNMDFEVEVDKILKVIPRERHTFLFSATMTKKVKKLQRACLRDPVKVEVSTKYQT 229
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P K+KD YLV+IL E++ +S M+F TC+ T AL+LRNLG A+P+
Sbjct: 230 VEKLQQYYIFIPVKFKDVYLVHILNEMAGNSFMIFCSTCNNTIRTALLLRNLGLTAVPLH 289
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRL AL KFKA +ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 290 GQMSQNKRLAALTKFKAKNRSILISTDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRT 349
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E Y +IE+LIGK+LP + EE+EV++L ERV E++R+++M +
Sbjct: 350 ARAGRSGKAITFVTQYDVELYQRIEQLIGKQLPLYKTEEDEVMVLQERVAESQRLAKMEM 409
Query: 369 KDSGNKRRRK 378
KD G+K+ ++
Sbjct: 410 KDLGDKKGKR 419
>gi|449666070|ref|XP_002163050.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like, partial
[Hydra magnipapillata]
Length = 431
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 242/387 (62%), Positives = 312/387 (80%), Gaps = 7/387 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALP+LQ LL+ QR +A V++PTRELA QISEQFEA
Sbjct: 32 GKDIIGLAETGSGKTGAFALPVLQTLLD--NPQR----LYALVITPTRELAFQISEQFEA 85
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGGVD+M Q+LAL K+PHIV+ATPGRL+DHL NTKGFSL +LKYL++D
Sbjct: 86 LGSSIGIKCAVIVGGVDLMTQSLALTKKPHIVIATPGRLVDHLENTKGFSLRSLKYLIMD 145
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE+ +++IL VIP+ R TYLFSATMTKKV KLQRA LKNPVK+E ++K+ T
Sbjct: 146 EADRILNMDFEEEVNKILKVIPKERSTYLFSATMTKKVAKLQRASLKNPVKVEVSTKFQT 205
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P K+KDCYLV IL +++ +S ++F TC+ + + L+LR+LG A+P+
Sbjct: 206 VEKLQQSYIFIPNKFKDCYLVSILNDLAGNSFIIFCGTCNNVQRVCLLLRHLGFHAVPLH 265
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M+Q+KRLGALNK+K+ ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 266 GQMTQAKRLGALNKYKSKSRTILIATDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRT 325
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+ V QY++E Y +IE+LIGKKLP P EEEV+LL+ERVTEA+R ++M +
Sbjct: 326 ARAGRSGRSITFVTQYDVELYQRIEQLIGKKLPLHPMVEEEVMLLVERVTEAQRYAKMEL 385
Query: 369 KDSGNKRRRKGGDEDDDIGRQFGINKK 395
K ++ +RK D DD+ I+KK
Sbjct: 386 KQV-HETKRKTIDIDDEENSTEKISKK 411
>gi|195051805|ref|XP_001993174.1| GH13670 [Drosophila grimshawi]
gi|193900233|gb|EDV99099.1| GH13670 [Drosophila grimshawi]
Length = 518
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 247/399 (61%), Positives = 309/399 (77%), Gaps = 18/399 (4%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPIL ALLE QR +FA VL+PTRELA QI EQFEA
Sbjct: 94 GKDVIGLAETGSGKTGAFALPILHALLE--NPQR----YFALVLTPTRELAFQIGEQFEA 147
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI ++C V+VGG+DM+ Q L L K+PHI++ATPGRL+DHL N KGF+L +KYLV+D
Sbjct: 148 LGSGIGIKCCVIVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENLKGFNLKAIKYLVMD 207
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE LD+IL V+PR R+T+LFSATMTKKVKKLQRA LK+PVK+E ++KY T
Sbjct: 208 EADRILNMDFEVELDKILKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQT 267
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD L+Q Y F+P KYKD YLV+IL E++ +S M+F TC+ T ALMLR LG AIP+
Sbjct: 268 VDQLQQYYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLH 327
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRL ALNKFKA +ILI TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 328 GQMSQNKRLAALNKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 387
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI++V+QY++E Y +IE+L+GK+LP + EE+EV+ L ERV EA+R +++
Sbjct: 388 ARAGRSGQAITIVSQYDIELYQRIEQLLGKQLPLYKCEEDEVMALQERVAEAQRTAKLEF 447
Query: 369 KD----------SGNKRRRKGGDEDDDIGRQFGINKKKL 397
KD GNKR ++DD QF +K++
Sbjct: 448 KDLEDSKGYKGGRGNKRTAASDNQDD--SEQFTGARKRM 484
>gi|380013608|ref|XP_003690844.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Apis
florea]
Length = 452
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 247/398 (62%), Positives = 315/398 (79%), Gaps = 11/398 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKT AFALPILQALLE QR +FA +L+PTRELA QISEQFEA
Sbjct: 55 GKDIIGLAETGSGKTAAFALPILQALLE--NPQR----YFALILTPTRELAFQISEQFEA 108
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+DMM Q L L K+PHI++ATPGRL+DHL NTKGFSL +LK+LV+D
Sbjct: 109 LGSSIGVKCAVIVGGMDMMSQALILAKKPHILIATPGRLVDHLENTKGFSLRSLKFLVMD 168
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T LFSATMTKKV+KLQRA L+NPVK+E ++KY T
Sbjct: 169 EADRILNMDFEVEVDKILRVIPRERKTLLFSATMTKKVQKLQRASLRNPVKVEVSTKYQT 228
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P K+KD YLV+IL E++ +S M+F TC+ T AL+LRNLG A+P+
Sbjct: 229 VEKLQQYYIFIPVKFKDVYLVHILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPLH 288
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KR+ AL KFKA +ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 289 GQMSQNKRIAALTKFKAKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRT 348
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+ V QY++E Y +IE+LI K+LP +P +EEEV++L ERV EA+RI +M +
Sbjct: 349 ARAGRSGRSITFVTQYDVELYQRIEQLISKQLPLYPTQEEEVMVLEERVAEARRIVKMEM 408
Query: 369 KDSGN-----KRRRKGGDEDDDIGRQFGINKKKLSKRK 401
KD + KR+++ D++DD + G+ K+ K K
Sbjct: 409 KDIEDSKKIGKRKKRQDDDEDDTEQSLGVRKRIKGKNK 446
>gi|195475963|ref|XP_002090252.1| GE12898 [Drosophila yakuba]
gi|194176353|gb|EDW89964.1| GE12898 [Drosophila yakuba]
Length = 522
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/381 (64%), Positives = 303/381 (79%), Gaps = 10/381 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPIL ALLE QR +FA VL+PTRELA QI EQFEA
Sbjct: 105 GKDVIGLAETGSGKTGAFALPILHALLE--NPQR----YFALVLTPTRELAFQIGEQFEA 158
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI ++C V+VGG+DM+ Q L L K+PHI++ATPGRL+DHL N KGF+L +KYLV+D
Sbjct: 159 LGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMD 218
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE LD+IL V+PR R+T+LFSATMTKKVKKLQRA LK+PVK+E ++KY T
Sbjct: 219 EADRILNMDFEVELDKILKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQT 278
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P KYKD YLV+IL +++ +S M+F TC+ T ALMLR LG AIP+
Sbjct: 279 VEQLQQSYLFIPVKYKDVYLVHILNDLAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLH 338
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRL ALNKFKA +ILI TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 339 GQMSQNKRLAALNKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 398
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+LV QY++E Y +IE L+GK+LP + EE+EV+ L ERV EA+R +++ +
Sbjct: 399 ARAGRSGKAITLVTQYDIELYQRIEHLLGKQLPLYKCEEDEVMALQERVAEAQRTAKLEL 458
Query: 369 KD----SGNKRRRKGGDEDDD 385
KD G K ++GGD DD
Sbjct: 459 KDLEDTKGVKGHKRGGDIHDD 479
>gi|21464402|gb|AAM52004.1| RE27528p [Drosophila melanogaster]
Length = 507
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 243/379 (64%), Positives = 303/379 (79%), Gaps = 8/379 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPIL ALLE QR +FA VL+PTRELA QI EQFEA
Sbjct: 98 GKDVIGLAETGSGKTGAFALPILHALLE--NPQR----YFALVLTPTRELAFQIGEQFEA 151
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI ++C V+VGG+DM+ Q L L K+PHI++ATPGRL+DHL N KGF+L +KYLV+D
Sbjct: 152 LGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMD 211
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE LD+IL V+PR R+T+LFSATMTKKVKKLQRA LK+PVK+E ++KY T
Sbjct: 212 EADRILNMDFEVELDKILKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQT 271
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P KYKD YLV+IL E++ +S M+F TC+ T ALMLR LG AIP+
Sbjct: 272 VEQLQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLH 331
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRL ALNKFKA +ILI TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 332 GQMSQNKRLAALNKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 391
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+LV+QY++E Y +IE L+GK+L + EE+EV+ L ERV EA+R +++ +
Sbjct: 392 ARAGRSGKAITLVSQYDIELYQRIEHLLGKQLTLYKCEEDEVMALQERVAEAQRTAKLEL 451
Query: 369 KDSGNKR--RRKGGDEDDD 385
KD + R ++GGD DD
Sbjct: 452 KDLEDTRGGHKRGGDTHDD 470
>gi|223947385|gb|ACN27776.1| unknown [Zea mays]
gi|413934955|gb|AFW69506.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 430
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/379 (64%), Positives = 300/379 (79%), Gaps = 29/379 (7%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDLI LAQTGSGKTGAFALPILQ LL N++ +FFACVLSPTRELAIQI+EQFEA
Sbjct: 61 GKDLIALAQTGSGKTGAFALPILQELLS---NRQAEQSFFACVLSPTRELAIQIAEQFEA 117
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I LRC+VLVGGVD +QQ L++GKRPHIVV LD
Sbjct: 118 LGSAIGLRCSVLVGGVDRVQQVLSIGKRPHIVV-------------------------LD 152
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD+LLN +FEKSLD+IL+ +P+ R+T+LFSATMTKKV KLQRACL+NP K+E +SKYST
Sbjct: 153 EADKLLNVEFEKSLDDILSEMPKDRRTFLFSATMTKKVNKLQRACLRNPAKVEVSSKYST 212
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD+LKQ++ FVPA KDCYL+++L E S M+F RTC++TRLLALMLRNLG +A+ IS
Sbjct: 213 VDSLKQEFYFVPADDKDCYLLHVLNERLESMIMIFVRTCESTRLLALMLRNLGLKAMSIS 272
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ KRLGALN+FKA +CNILICTDVASRGLDI VDMVINYDIP NSKDY+HRVGRT
Sbjct: 273 GQMSQDKRLGALNRFKAKDCNILICTDVASRGLDIQGVDMVINYDIPMNSKDYVHRVGRT 332
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G A+SLVNQYE +W++ IE+L+GKK+ + + +EVL+L +++AKRI+ +
Sbjct: 333 ARAGRSGYAVSLVNQYEAQWFVLIEQLLGKKIDQCKVDRDEVLILKGPISDAKRIALTKL 392
Query: 369 KDS-GNKRRRKGGDEDDDI 386
KDS G+K+RR GD+D+++
Sbjct: 393 KDSGGHKKRRNVGDDDEEV 411
>gi|348689923|gb|EGZ29737.1| hypothetical protein PHYSODRAFT_309945 [Phytophthora sojae]
Length = 482
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 237/377 (62%), Positives = 297/377 (78%), Gaps = 11/377 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKD+IGLA+TGSGKTGAF +PILQ+LL R +A VL+PTRELA QI EQFE
Sbjct: 67 AGKDIIGLAETGSGKTGAFVIPILQSLL------RNPQRLYALVLAPTRELAYQIGEQFE 120
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
ALG+ I L+CA +VGG+DMMQQ +AL ++PH+V+ATPGRL+DHL NTKGFSL T+K+LVL
Sbjct: 121 ALGASIGLKCACVVGGIDMMQQQVALARKPHVVIATPGRLVDHLENTKGFSLRTMKFLVL 180
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L+ DFE+ +++I+ ++P R TYLFSATMT KV+KLQRA LK+PVK+E K++
Sbjct: 181 DEADRMLSMDFEEEINQIVQLMPAERNTYLFSATMTSKVRKLQRASLKDPVKVEITHKFA 240
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
T +TLKQ Y F+PAK+KDCYL Y+L EV+ S ++F TC+ T+ + LMLRNLG +AI +
Sbjct: 241 TPETLKQHYLFIPAKFKDCYLAYVLNEVAGQSVLIFASTCNGTQKVTLMLRNLGFQAICL 300
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G M Q RLGALNKFKA N+L+CTDVASRGLDIPSVD+VINYDIPT+ KDYIHRVGR
Sbjct: 301 HGQMPQPSRLGALNKFKAKARNVLVCTDVASRGLDIPSVDVVINYDIPTHGKDYIHRVGR 360
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAGR GVAIS V QY++E Y +IE L+G KL +P EEE VL++ ERV EA+RI+ +
Sbjct: 361 TARAGRAGVAISFVTQYDVELYQRIEHLLGTKLDAYPCEEETVLVMSERVNEAQRIATIE 420
Query: 368 IKD-----SGNKRRRKG 379
+K+ SG KR R G
Sbjct: 421 MKESVANGSGFKRGRYG 437
>gi|443726900|gb|ELU13896.1| hypothetical protein CAPTEDRAFT_175937 [Capitella teleta]
Length = 453
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/362 (64%), Positives = 300/362 (82%), Gaps = 6/362 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLA+TGSGKTG+FALP+LQ LL+ QR + VL+PTRELA QISEQFEA
Sbjct: 64 GSDVIGLAETGSGKTGSFALPVLQTLLD--NPQR----MYCLVLTPTRELAFQISEQFEA 117
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ I ++CAV+VGG+DMM Q++ L K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 118 LGASIGVKCAVIVGGMDMMTQSMVLAKKPHIIIATPGRLVDHLENTKGFNLRALKYLVMD 177
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE+ +++IL VIP+ R+TYL+SATMT KV KLQRACLKNPVK+E ++KY T
Sbjct: 178 EADRILNMDFEQEVNKILKVIPKERKTYLYSATMTSKVAKLQRACLKNPVKVEVSTKYQT 237
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD L+Q Y F+PAK+KD YLVYIL E++ +S +VF TC T+ +ALMLRNLG AIP+
Sbjct: 238 VDKLQQSYCFIPAKFKDVYLVYILNELAGNSFIVFCSTCANTQRVALMLRNLGMTAIPLH 297
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M+Q+KRLGALNKFK+ +ILI TDVASRGLDIP V++V+N+DIPT+SKDYIHRVGRT
Sbjct: 298 GQMNQTKRLGALNKFKSKSRSILIATDVASRGLDIPHVNVVVNFDIPTHSKDYIHRVGRT 357
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG++G AI+LV QY++E Y +IE+LIGKKLP + E+EEV+++ ERVTEA+R ++M +
Sbjct: 358 ARAGKSGKAITLVTQYDVELYQRIEQLIGKKLPLYKTEQEEVMMMTERVTEAQRYAKMEM 417
Query: 369 KD 370
+
Sbjct: 418 NE 419
>gi|24585582|ref|NP_610090.1| CG9253 [Drosophila melanogaster]
gi|7298752|gb|AAF53963.1| CG9253 [Drosophila melanogaster]
gi|384475998|gb|AFH89832.1| FI20110p1 [Drosophila melanogaster]
Length = 507
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 243/379 (64%), Positives = 303/379 (79%), Gaps = 8/379 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPIL ALLE QR +FA VL+PTRELA QI EQFEA
Sbjct: 98 GKDVIGLAETGSGKTGAFALPILHALLE--NPQR----YFALVLTPTRELAFQIGEQFEA 151
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI ++C V+VGG+DM+ Q L L K+PHI++ATPGRL+DHL N KGF+L +KYLV+D
Sbjct: 152 LGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMD 211
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE LD+IL V+PR R+T+LFSATMTKKVKKLQRA LK+PVK+E ++KY T
Sbjct: 212 EADRILNMDFEVELDKILKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQT 271
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P KYKD YLV+IL E++ +S M+F TC+ T ALMLR LG AIP+
Sbjct: 272 VEQLQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLH 331
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRL ALNKFKA +ILI TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 332 GQMSQNKRLAALNKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 391
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+LV+QY++E Y +IE L+GK+L + EE+EV+ L ERV EA+R +++ +
Sbjct: 392 ARAGRSGKAITLVSQYDIELYQRIEHLLGKQLTLYKCEEDEVMALQERVAEAQRTAKLEL 451
Query: 369 KDSGNKR--RRKGGDEDDD 385
KD + R ++GGD DD
Sbjct: 452 KDLEDTRGGHKRGGDTHDD 470
>gi|195118551|ref|XP_002003800.1| GI21075 [Drosophila mojavensis]
gi|193914375|gb|EDW13242.1| GI21075 [Drosophila mojavensis]
Length = 515
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 247/398 (62%), Positives = 309/398 (77%), Gaps = 17/398 (4%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPIL ALLE QR +FA VL+PTRELA QI EQFEA
Sbjct: 96 GKDIIGLAETGSGKTGAFALPILHALLE--NPQR----YFALVLTPTRELAFQIGEQFEA 149
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI ++C V+VGG+DM+ Q L L K+PHI++ATPGRL+DHL N KGF+L +KYLV+D
Sbjct: 150 LGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENLKGFNLKAIKYLVMD 209
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE LD+IL V+PR R+T+LFSATMTKKVKKLQRA LK+PVK+E ++KY T
Sbjct: 210 EADRILNMDFEVELDKILKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQT 269
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD L+Q Y F+P KYKD YLV+IL E++ +S M+F TC+ T ALMLR LG AIP+
Sbjct: 270 VDQLQQYYIFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLH 329
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRL ALNKFKA +ILI TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 330 GQMSQNKRLAALNKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 389
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI++V QY++E Y +IE+L+GK+LP + EE+EV+ L ERV EA+R +++ +
Sbjct: 390 ARAGRSGQAITMVTQYDIELYQRIEQLLGKQLPLYKCEEDEVMALQERVAEAQRTAKLEL 449
Query: 369 KDSGNKRRRKG---------GDEDDDIGRQFGINKKKL 397
KD + + KG GD DD QF +K++
Sbjct: 450 KDLEDSKSYKGSKGNKRAALGDIDD--SEQFTGARKRM 485
>gi|307178385|gb|EFN67130.1| Probable ATP-dependent RNA helicase DDX47 [Camponotus floridanus]
Length = 435
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/399 (60%), Positives = 316/399 (79%), Gaps = 12/399 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKT AFALPILQALLE QR +FA +L+PTRELA QISEQFEA
Sbjct: 39 GKDVIGLAETGSGKTAAFALPILQALLE--NPQR----YFALILTPTRELAFQISEQFEA 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+DM Q L L K+PHI++ATPGRL+DHL NTKGF+L +K+L++D
Sbjct: 93 LGSSIGVKCAVIVGGMDMHAQGLLLEKKPHIIIATPGRLVDHLENTKGFNLRQIKFLIMD 152
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +++IL V+PR R+T LFSATMTKKV+KLQRA L+NPVK+E ++KY T
Sbjct: 153 EADRILNMDFEVEVNKILRVMPRERRTLLFSATMTKKVQKLQRASLRNPVKVEVSTKYQT 212
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P K+KD YLV+IL E++ ++ M+F TC+ T AL+LRNLG A+P+
Sbjct: 213 VEKLQQYYIFIPVKFKDVYLVHILNELAGNNFMIFCGTCNNTVRTALLLRNLGFTAVPLH 272
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KR+ AL KF+A +ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 273 GQMSQNKRIAALTKFRAKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRT 332
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+ + QY++E Y +IE+LI K+LP +P EEEEV+LL ERV+EA+RI +M +
Sbjct: 333 ARAGRSGRSITFITQYDVELYQRIEQLISKQLPLYPTEEEEVMLLQERVSEAQRIVKMDM 392
Query: 369 KD-SGNK---RRRKGGDEDDDIGRQFGINK--KKLSKRK 401
K+ NK +R++G + +DD + G+ K K SKRK
Sbjct: 393 KNIEENKKLGKRKRGSNNEDDTEQSIGVRKRMKVKSKRK 431
>gi|301119991|ref|XP_002907723.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262106235|gb|EEY64287.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 479
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 240/398 (60%), Positives = 306/398 (76%), Gaps = 11/398 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKD+IGLA+TGSGKTGAF +PILQ+LL QR +A VL+PTRELA QI EQFE
Sbjct: 64 AGKDIIGLAETGSGKTGAFVIPILQSLLH--NPQR----LYALVLAPTRELAYQIGEQFE 117
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
ALG+ I L+CA +VGG+DMMQQ +AL ++PH+V+ATPGRL+DHL NTKGFSL T+K+LVL
Sbjct: 118 ALGASIGLKCACVVGGIDMMQQQVALARKPHVVIATPGRLVDHLENTKGFSLRTMKFLVL 177
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L+ DFE+ +++I+ ++P R TYLFSATMT KV+KLQRA LK+PVK+E K++
Sbjct: 178 DEADRMLSMDFEEEINQIVQLMPADRNTYLFSATMTSKVRKLQRASLKDPVKVEITHKFA 237
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
T +TLKQ Y F+PAK+KDCYL Y+L EV+ S ++F TC+ T+ + LMLRNLG +AI +
Sbjct: 238 TPETLKQHYLFIPAKFKDCYLAYVLNEVAGQSVLIFASTCNGTQKVTLMLRNLGFQAICL 297
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G M Q RLGALNKFKA N+L+CTDVASRGLDIPSVD+VINYDIPT+ KDYIHRVGR
Sbjct: 298 HGQMPQPSRLGALNKFKAKARNVLVCTDVASRGLDIPSVDVVINYDIPTHGKDYIHRVGR 357
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAGR GVAIS V QY++E Y +IE L+G KL + EEE VL++ ERV EA+RI+ +
Sbjct: 358 TARAGRAGVAISFVTQYDVELYQRIEHLLGTKLDAYSCEEETVLVITERVNEAQRIATIE 417
Query: 368 IKD-----SGNKRRRKGGDEDDDIGRQFGINKKKLSKR 400
+K+ +G KR R D+++ + G K K + R
Sbjct: 418 MKEAAANGTGIKRGRYARDDNEGDDEEGGEKKYKSAAR 455
>gi|427789491|gb|JAA60197.1| Putative atp-dependent rna helicase ddx47 [Rhipicephalus
pulchellus]
Length = 465
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/362 (64%), Positives = 295/362 (81%), Gaps = 6/362 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKT +FALPILQALLE + FA VL+PTRELA QISEQFEA
Sbjct: 62 GRDVIGLAETGSGKTASFALPILQALLETPQR------LFALVLTPTRELAFQISEQFEA 115
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ I ++ AV+VGG+DMM Q L L K+PH+++ATPGRL+DHL NTKGF+L +LKYLV+D
Sbjct: 116 LGASIGVKSAVIVGGIDMMTQALTLAKKPHVIIATPGRLVDHLENTKGFNLKSLKYLVMD 175
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE+ +D+IL VIPR R+TYL+SATMTKKV+KLQRA L++PVK+E +SKY T
Sbjct: 176 EADRILNMDFEEEVDKILRVIPRERRTYLYSATMTKKVQKLQRASLRDPVKVEVSSKYQT 235
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L Q Y F+PAK+KD YLV++L E++ +S MVF TC T+ AL+LRNLG AIP+
Sbjct: 236 VEKLMQYYLFIPAKFKDVYLVHLLNELAGNSFMVFCSTCSNTQRTALLLRNLGFTAIPLH 295
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M Q+KRLGAL KFK+ +ILI TDVASRGLDIP VD V+N+DIPT+SKDYIHRVGRT
Sbjct: 296 GQMGQAKRLGALTKFKSKNRSILIATDVASRGLDIPHVDCVVNFDIPTHSKDYIHRVGRT 355
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E Y +IE+LIGKKLP + EEEV+ L+ERVTEA+R ++M +
Sbjct: 356 ARAGRSGKAITFVTQYDVELYQRIEQLIGKKLPLYETVEEEVMSLVERVTEAQRFAKMEL 415
Query: 369 KD 370
K+
Sbjct: 416 KE 417
>gi|66550432|ref|XP_395653.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Apis mellifera]
Length = 452
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 246/398 (61%), Positives = 314/398 (78%), Gaps = 11/398 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKT AFALPILQALLE QR +FA +L+PTRELA QISEQFEA
Sbjct: 55 GKDIIGLAETGSGKTAAFALPILQALLE--NPQR----YFALILTPTRELAFQISEQFEA 108
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+DMM Q L L K+PHI++ATPGRL+DHL NTKGFSL +LK+LV+D
Sbjct: 109 LGSSIGVKCAVIVGGMDMMSQALILAKKPHILIATPGRLVDHLENTKGFSLRSLKFLVMD 168
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T LFSATMTKKV+KLQRA L+NPVK+E ++KY T
Sbjct: 169 EADRILNMDFEVEVDKILRVIPRERKTLLFSATMTKKVQKLQRASLRNPVKVEVSTKYQT 228
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P K+KD YLV+IL E++ +S M+F TC+ T AL+LRNLG A+P+
Sbjct: 229 VEKLQQYYIFIPVKFKDVYLVHILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPLH 288
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KR+ AL KFKA +ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 289 GQMSQNKRIAALTKFKAKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRT 348
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+ V QY++E Y +IE+LI K+LP + +EEEV++L ERV EA+RI +M +
Sbjct: 349 ARAGRSGRSITFVTQYDVELYQRIEQLISKQLPLYATQEEEVMVLEERVAEARRIVKMEM 408
Query: 369 KDSGN-----KRRRKGGDEDDDIGRQFGINKKKLSKRK 401
KD + KR+++ D++DD + G+ K+ K K
Sbjct: 409 KDIEDSKKVGKRKKRQDDDEDDTEQSLGVRKRIKGKNK 446
>gi|195443116|ref|XP_002069285.1| GK21047 [Drosophila willistoni]
gi|194165370|gb|EDW80271.1| GK21047 [Drosophila willistoni]
Length = 507
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/362 (65%), Positives = 296/362 (81%), Gaps = 6/362 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPILQALLE QR +FA VL+PTRELA QI EQFEA
Sbjct: 92 GKDVIGLAETGSGKTGAFALPILQALLE--NPQR----YFALVLTPTRELAFQIGEQFEA 145
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI ++C V+VGG+DM+ Q L L K+PHI++ATPGRL+DHL N KGF+L +KYLV+D
Sbjct: 146 LGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMD 205
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE LD+IL V+PR R+T+LFSATMTKKVKKLQRA LK+PVK+E ++KY T
Sbjct: 206 EADRILNMDFEVELDKILKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQT 265
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P KYKD YLV+IL E++ +S M+F TC+ T ALMLR LG AIP+
Sbjct: 266 VEQLQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLH 325
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRL ALNKFKA +ILI TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 326 GQMSQNKRLAALNKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 385
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI++V+QY++E Y +IE L+GK+LP + EE+EV+ L ERV EA+R +++ +
Sbjct: 386 ARAGRSGRAITMVSQYDIELYQRIEHLLGKQLPLYKCEEDEVMALQERVAEAQRTAKLEL 445
Query: 369 KD 370
KD
Sbjct: 446 KD 447
>gi|340372039|ref|XP_003384552.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Amphimedon queenslandica]
Length = 451
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 239/361 (66%), Positives = 293/361 (81%), Gaps = 6/361 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAF+LPILQ+LL+ T FA VL+PTRELA QISEQFEA
Sbjct: 63 GRDVIGLAETGSGKTGAFSLPILQSLLD------TPTRLFALVLTPTRELAFQISEQFEA 116
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG I ++CAV+VGGVDMM Q LAL K+PH+V+ATPGRL+DHL NTKGFSL ++KYLV+D
Sbjct: 117 LGGRIGVKCAVVVGGVDMMTQALALAKKPHVVIATPGRLVDHLENTKGFSLRSVKYLVMD 176
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DF + +D+IL V+ R R+TYL+SATMTKKV+KLQRA L NP+K+E ++KY T
Sbjct: 177 EADRILNMDFGEEVDKILKVLSRERRTYLYSATMTKKVQKLQRASLHNPIKVEVSTKYQT 236
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD L+Q Y F+P+KYKDCYLV IL E + +S MVF TC T+ A+MLRNLG AIP+
Sbjct: 237 VDKLQQSYIFIPSKYKDCYLVSILNEFAGNSFMVFCSTCANTQRTAVMLRNLGLPAIPLY 296
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M+Q KRLGAL+KFK+ +ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 297 GKMAQMKRLGALSKFKSKSRSILIATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRT 356
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E Y +IE LIGKKLP FP EEEVL L ERV EA+R ++M +
Sbjct: 357 ARAGRSGRAITFVTQYDVELYQRIESLIGKKLPLFPTVEEEVLSLAERVAEAQRYARMEM 416
Query: 369 K 369
+
Sbjct: 417 Q 417
>gi|194878451|ref|XP_001974067.1| GG21281 [Drosophila erecta]
gi|190657254|gb|EDV54467.1| GG21281 [Drosophila erecta]
Length = 524
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 239/362 (66%), Positives = 295/362 (81%), Gaps = 6/362 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPIL ALLE QR +FA VL+PTRELA QI EQFEA
Sbjct: 106 GKDVIGLAETGSGKTGAFALPILHALLE--NPQR----YFALVLTPTRELAFQIGEQFEA 159
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI ++C V+VGG+DM+ Q L L K+PHI++ATPGRL+DHL N KGF+L +KYLV+D
Sbjct: 160 LGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMD 219
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE LD+IL V+PR R+T+LFSATMTKKVKKLQRA LK+PVK+E ++KY T
Sbjct: 220 EADRILNMDFEVELDKILKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQT 279
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P KYKD YLV+IL E+S +S M+F TC+ T ALMLR LG AIP+
Sbjct: 280 VEQLQQSYLFIPVKYKDVYLVHILNELSGNSFMIFCSTCNNTVKTALMLRALGLAAIPLH 339
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRL ALNKFKA +ILI TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 340 GQMSQNKRLAALNKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 399
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+LV+QY++E Y +IE L+GK+LP + EE+EV+ L ERV EA+R +++ +
Sbjct: 400 ARAGRSGKAITLVSQYDIELYQRIEHLLGKQLPLYKCEEDEVMALQERVAEAQRTAKLEL 459
Query: 369 KD 370
KD
Sbjct: 460 KD 461
>gi|157138136|ref|XP_001664143.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108869558|gb|EAT33783.1| AAEL013950-PA [Aedes aegypti]
Length = 495
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/371 (64%), Positives = 298/371 (80%), Gaps = 6/371 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPILQALLE QR +FA +L+PTRELA QISEQFEA
Sbjct: 94 GKDVIGLAETGSGKTGAFALPILQALLE--NPQR----YFAVILTPTRELAYQISEQFEA 147
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ I ++C V+VGG+DM+ Q L L ++PHI++ATPGRL+DHL NTKGF+L +KYLV+D
Sbjct: 148 LGASIGIKCCVIVGGMDMVSQALHLARKPHIIIATPGRLVDHLENTKGFNLKAVKYLVMD 207
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE L++IL VIPR R+T+LFSATMTKKVKKL+RA LK+PVK+E +SKY T
Sbjct: 208 EADRILNLDFEVELEKILKVIPRERRTFLFSATMTKKVKKLERASLKDPVKVEVSSKYQT 267
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L Q Y F+PAKYKD YLV+IL E++ +S M+F TC+ T ALMLR LG A+P+
Sbjct: 268 VEKLLQYYIFIPAKYKDVYLVHILNELAGNSFMIFCSTCNNTVRTALMLRALGLAAVPLH 327
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRL ALNKFK ILI TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 328 GQMSQNKRLAALNKFKGKNRQILISTDVASRGLDIPHVDVVLNFDIPTHSKDYIHRVGRT 387
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR G A++ V QY++E Y +IE L+GKKLP+F EE+EV+ L ERV EA+R +++ +
Sbjct: 388 ARAGRAGKAVTFVTQYDVELYQRIEHLLGKKLPQFKCEEDEVMALQERVGEAQRTARLEL 447
Query: 369 KDSGNKRRRKG 379
KD +++ KG
Sbjct: 448 KDIDDRKGSKG 458
>gi|156548270|ref|XP_001601432.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Nasonia
vitripennis]
Length = 460
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/362 (64%), Positives = 298/362 (82%), Gaps = 6/362 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKT AFALPILQALLE QR +FA +L+PTRELA QISEQFEA
Sbjct: 61 GKDVIGLAETGSGKTAAFALPILQALLE--NPQR----YFALILTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ I ++C V+VGG+DMM Q+L L K+PHI++ATPGRL+DHL NTKGF+L +LK+LV+D
Sbjct: 115 LGASIGVKCVVIVGGMDMMTQSLMLAKKPHIIIATPGRLVDHLENTKGFNLRSLKFLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T LFSATMTKKV+KLQRA L+NPVK+E ++KY T
Sbjct: 175 EADRILNMDFEVEVDKILRVIPRERRTLLFSATMTKKVQKLQRASLQNPVKVEVSTKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P K+KD YLV+IL E+S +S M+F TC+ T AL+LR+LG A+P+
Sbjct: 235 VEKLQQYYVFIPVKFKDVYLVHILNELSGNSFMIFCSTCNNTMRTALLLRSLGFMAVPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KR+ AL KFKA +ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMSQNKRIAALTKFKAKNRSILISTDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G++++ V QY++E Y +IE+LIGK+LP + EE+EV++L ERV EA+R+ +M +
Sbjct: 355 ARAGRSGISVTFVTQYDVELYQRIEQLIGKQLPIYKTEEQEVMVLQERVAEAQRMVKMEM 414
Query: 369 KD 370
KD
Sbjct: 415 KD 416
>gi|346472553|gb|AEO36121.1| hypothetical protein [Amblyomma maculatum]
Length = 473
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 236/362 (65%), Positives = 295/362 (81%), Gaps = 6/362 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKT +FALPILQALLE QR FA VL+PTRELA QISEQFEA
Sbjct: 69 GRDVIGLAETGSGKTASFALPILQALLE--NPQR----LFALVLTPTRELAFQISEQFEA 122
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ I ++ AV+VGG+DMM Q L L K+PH+++ATPGRL+DHL NTKGFSL +LKYLV+D
Sbjct: 123 LGASIGVKSAVIVGGIDMMTQALLLAKKPHVIIATPGRLVDHLENTKGFSLKSLKYLVMD 182
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE+ +D+IL VIPR R+TYL+SATMTKKV+KLQRA L++PVK+E +SKY T
Sbjct: 183 EADRILNMDFEEEVDKILRVIPRERRTYLYSATMTKKVQKLQRASLRDPVKVEVSSKYQT 242
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L Q Y F+PAK+KD YLV++L E++ +S MVF TC T+ AL+LRNLG AIP+
Sbjct: 243 VEKLMQYYLFIPAKFKDVYLVHLLNELAGNSFMVFCSTCSNTQRTALLLRNLGFTAIPLH 302
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M Q+KRLG+L KFK+ +ILI TDVASRGLDIP VD V+N+DIPT+SKDYIHRVGRT
Sbjct: 303 GQMGQAKRLGSLTKFKSKNRSILIATDVASRGLDIPHVDCVVNFDIPTHSKDYIHRVGRT 362
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E Y +IE LIGKKLP + EEEV+ L+ERVTEA+R ++M +
Sbjct: 363 ARAGRSGKAITFVTQYDVELYQRIEHLIGKKLPLYETVEEEVMALVERVTEAQRFAKMEL 422
Query: 369 KD 370
K+
Sbjct: 423 KE 424
>gi|195155425|ref|XP_002018605.1| GL25891 [Drosophila persimilis]
gi|194114758|gb|EDW36801.1| GL25891 [Drosophila persimilis]
Length = 518
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 235/362 (64%), Positives = 294/362 (81%), Gaps = 6/362 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPIL ALLE + +FA VL+PTRELA QI EQFEA
Sbjct: 106 GKDVIGLAETGSGKTGAFALPILHALLESPQR------YFALVLTPTRELAFQIGEQFEA 159
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI ++C V+VGG+DM+ Q L L K+PHI++ATPGRL+DHL N KGF+L +KYLV+D
Sbjct: 160 LGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMD 219
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE LD+IL V+PR R+T+LFSATMTKKVKKLQRA LK+PVK+E ++KY T
Sbjct: 220 EADRILNMDFEVELDKILKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQT 279
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P KYKD YLV+IL E++ +S M+F TC+ T ALMLR LG AIP+
Sbjct: 280 VEQLQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLH 339
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRL ALNKFKA +ILI TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 340 GQMSQNKRLAALNKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 399
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI++V+QY++E Y +IE L+GK+LP + EE+EV+ L ERV EA+R +++ +
Sbjct: 400 ARAGRSGKAITIVSQYDIELYQRIEHLLGKQLPLYKCEEDEVMALQERVAEAQRTAKLEL 459
Query: 369 KD 370
KD
Sbjct: 460 KD 461
>gi|125987477|ref|XP_001357501.1| GA21647 [Drosophila pseudoobscura pseudoobscura]
gi|54645833|gb|EAL34571.1| GA21647 [Drosophila pseudoobscura pseudoobscura]
Length = 518
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 235/362 (64%), Positives = 294/362 (81%), Gaps = 6/362 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPIL ALLE + +FA VL+PTRELA QI EQFEA
Sbjct: 106 GKDVIGLAETGSGKTGAFALPILHALLESPQR------YFALVLTPTRELAFQIGEQFEA 159
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI ++C V+VGG+DM+ Q L L K+PHI++ATPGRL+DHL N KGF+L +KYLV+D
Sbjct: 160 LGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMD 219
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE LD+IL V+PR R+T+LFSATMTKKVKKLQRA LK+PVK+E ++KY T
Sbjct: 220 EADRILNMDFEVELDKILKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQT 279
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P KYKD YLV+IL E++ +S M+F TC+ T ALMLR LG AIP+
Sbjct: 280 VEQLQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLH 339
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRL ALNKFKA +ILI TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 340 GQMSQNKRLAALNKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 399
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI++V+QY++E Y +IE L+GK+LP + EE+EV+ L ERV EA+R +++ +
Sbjct: 400 ARAGRSGKAITIVSQYDIELYQRIEHLLGKQLPLYKCEEDEVMALQERVAEAQRTAKLEL 459
Query: 369 KD 370
KD
Sbjct: 460 KD 461
>gi|195401282|ref|XP_002059243.1| GJ16136 [Drosophila virilis]
gi|194156117|gb|EDW71301.1| GJ16136 [Drosophila virilis]
Length = 523
Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/362 (65%), Positives = 295/362 (81%), Gaps = 6/362 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPIL ALLE QR +FA VL+PTRELA QI EQFEA
Sbjct: 101 GKDVIGLAETGSGKTGAFALPILHALLE--NPQR----YFALVLTPTRELAFQIGEQFEA 154
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI ++C V+VGG+DM+ Q L L K+PHI++ATPGRL+DHL N KGF+L +KYLV+D
Sbjct: 155 LGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENLKGFNLKAIKYLVMD 214
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE LD+IL V+PR R+T+LFSATMTKKVKKLQRA LK+PVK+E ++KY T
Sbjct: 215 EADRILNMDFEVELDKILKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQT 274
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD L+Q Y F+P KYKD YLV+IL E++ +S M+F TC+ T ALMLR LG AIP+
Sbjct: 275 VDQLQQYYIFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLH 334
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRL ALNKFKA +ILI TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 335 GQMSQNKRLAALNKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 394
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI++V QY++E Y +IE+L+GK+LP + EE+EV+ L ERV EA+R +++ +
Sbjct: 395 ARAGRSGQAITMVTQYDIELYQRIEQLLGKQLPLYKCEEDEVMALQERVAEAQRTAKLEL 454
Query: 369 KD 370
KD
Sbjct: 455 KD 456
>gi|390351278|ref|XP_786173.3| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Strongylocentrotus purpuratus]
Length = 428
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 249/390 (63%), Positives = 307/390 (78%), Gaps = 9/390 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPILQALLE + FA VL+PTRELA QI+EQFEA
Sbjct: 36 GKDVIGLAETGSGKTGAFALPILQALLETPQR------LFALVLTPTRELAYQIAEQFEA 89
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I + C V+VGG+DMM Q L L K+PH+++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 90 LGSTIGVSCVVIVGGIDMMTQALQLAKKPHVMIATPGRLVDHLENTKGFNLRGLKYLVMD 149
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIP+ R+TYL+SATMTKKV KLQRA L++PVK+E ++KY T
Sbjct: 150 EADRILNMDFEAEIDKILKVIPKQRRTYLYSATMTKKVAKLQRASLQDPVKVEVSTKYQT 209
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V L+Q Y F+PAKYKDCYLV IL E + +S MVF TC+ T+ +AL+LRNLG AIP+
Sbjct: 210 VSKLQQSYIFIPAKYKDCYLVSILNEFAGNSFMVFCSTCNNTQRVALLLRNLGLTAIPLH 269
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQSKRLG LNKFK+ +ILI TDVASRGLDIP VD VIN+DIPT+SKDYIHRVGRT
Sbjct: 270 GQLSQSKRLGTLNKFKSKSRSILIATDVASRGLDIPHVDCVINFDIPTHSKDYIHRVGRT 329
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR G AI+ V QY++E Y +IE+LI KKLP F EEEEV++L+ERVTEA+R ++M +
Sbjct: 330 ARAGRAGKAITFVTQYDVELYQRIEQLIDKKLPLFKTEEEEVMMLMERVTEAQRYAKMEM 389
Query: 369 KDSGNKR---RRKGGDEDDDIGRQFGINKK 395
+DS K+ R +G D +D G+ K+
Sbjct: 390 RDSDEKKKGGRSRGRDSKEDSEEFTGVRKR 419
>gi|384487072|gb|EIE79252.1| hypothetical protein RO3G_03957 [Rhizopus delemar RA 99-880]
Length = 462
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/372 (62%), Positives = 297/372 (79%), Gaps = 6/372 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLAQTGSGKT AFA+PI+Q L + + AFFACVL+PTRELA QI+E FE+
Sbjct: 60 GRDIIGLAQTGSGKTAAFAIPIIQRLWQNPQ------AFFACVLAPTRELAYQIAETFES 113
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I +RCAV+VGG+DMM Q++AL KRPHI+V TPGRL DHL NTKGF+L LKYLV+D
Sbjct: 114 LGSVIGVRCAVIVGGMDMMTQSIALAKRPHIIVCTPGRLQDHLENTKGFNLKHLKYLVMD 173
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +D+IL VIPR R T+LFSATMT KV KLQRA L PVK+E A+KYST
Sbjct: 174 EADRLLDLDFGPKIDQILKVIPRERNTFLFSATMTTKVAKLQRASLHKPVKVEVATKYST 233
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y F P K+KDCY+VY+L E++ +ST++FTRTC T+ +A+MLRNLG AIP+
Sbjct: 234 VKTLLQYYLFFPLKHKDCYMVYLLNELAGNSTIIFTRTCSDTQKIAIMLRNLGFGAIPLH 293
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G + Q+KRLGALNKFKAG NIL+ TDVASRGLDIP VD+VINYD+P +SKDYIHRVGRT
Sbjct: 294 GQLPQAKRLGALNKFKAGARNILVATDVASRGLDIPLVDVVINYDVPQSSKDYIHRVGRT 353
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +++ V QY++E +IEK + +KL FP E++EV++L ERV EA+RI+ + +
Sbjct: 354 ARAGRSGKSVTFVTQYDVELIQRIEKDLERKLDAFPVEKDEVMMLQERVDEAQRIATLEL 413
Query: 369 KDSGNKRRRKGG 380
+++ N ++ K G
Sbjct: 414 RETANGKKSKRG 425
>gi|297736067|emb|CBI24105.3| unnamed protein product [Vitis vinifera]
Length = 536
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 252/291 (86%), Positives = 270/291 (92%), Gaps = 6/291 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDLIGLAQTGSGKTGAFALPILQALL+ T FACVLSPTRELAIQI+EQFEA
Sbjct: 46 GKDLIGLAQTGSGKTGAFALPILQALLD------TPQVLFACVLSPTRELAIQIAEQFEA 99
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI L+CAVLVGGVD QQ +AL KRPHIVV TPGRLMDHL+NTKGFSL T+KYLVLD
Sbjct: 100 LGSGIGLKCAVLVGGVDHTQQAIALAKRPHIVVGTPGRLMDHLSNTKGFSLRTMKYLVLD 159
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLLNDDFEK++DEIL+VIPR R+TYLFSATMTKKV+KLQRACL+NPVKIE ASKYST
Sbjct: 160 EADRLLNDDFEKAIDEILSVIPRERKTYLFSATMTKKVRKLQRACLRNPVKIEVASKYST 219
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTLKQQYRFVPAKYK+CYLVYILTE+S S+TMVFTRTCDATRLLAL+LRNLG RAIPIS
Sbjct: 220 VDTLKQQYRFVPAKYKECYLVYILTELSGSTTMVFTRTCDATRLLALLLRNLGLRAIPIS 279
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSK 299
GHMSQ+KRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP+NSK
Sbjct: 280 GHMSQAKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPSNSK 330
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/114 (71%), Positives = 96/114 (84%), Gaps = 5/114 (4%)
Query: 292 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 351
+ +P DYIHRVGRTARAGR+GVAISLVNQYELEWY+QIEKLIGKKLPEFPA+EEEVL
Sbjct: 423 FTLPRVFGDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEFPAQEEEVL 482
Query: 352 LLLERVTEAKRISQMTIKDSGNKRRRKGGDE-DDDIGRQF----GINKKKLSKR 400
LLLERVTEAKRISQM +K++G K++R+GGDE +++I R G + KKL KR
Sbjct: 483 LLLERVTEAKRISQMKVKETGGKKKRRGGDEGEEEIDRYLASKNGKSSKKLKKR 536
>gi|194759163|ref|XP_001961819.1| GF14739 [Drosophila ananassae]
gi|190615516|gb|EDV31040.1| GF14739 [Drosophila ananassae]
Length = 525
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/362 (65%), Positives = 296/362 (81%), Gaps = 6/362 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPIL ALLE QR FFA VL+PTRELA QI EQFEA
Sbjct: 108 GKDVIGLAETGSGKTGAFALPILHALLE--NPQR----FFALVLTPTRELAFQIGEQFEA 161
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++C V+VGG+DM+ Q L L K+PHI++ATPGRL+DHL N KGF+L ++KYLV+D
Sbjct: 162 LGSSIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKSIKYLVMD 221
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE LD+IL V+PR R+T+LFSATMTKKVKKLQRA LK+PVK+E ++KY T
Sbjct: 222 EADRILNMDFEVELDKILKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQT 281
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P KYKD YLV+IL E++ +S M+F TC+ T ALMLR LG AIP+
Sbjct: 282 VEQLQQYYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLH 341
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRL ALNKFKA + +ILI TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 342 GQMSQNKRLAALNKFKAKDRSILISTDVASRGLDIPHVDVVLNFDIPTHSKDYIHRVGRT 401
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+LV+QY++E Y +IE L+GK+LP + EE+EV+ L ERV EA+R +++ +
Sbjct: 402 ARAGRSGKAITLVSQYDIELYQRIEHLLGKQLPLYKCEEDEVMALQERVAEAQRTAKLEL 461
Query: 369 KD 370
KD
Sbjct: 462 KD 463
>gi|332030497|gb|EGI70185.1| Putative ATP-dependent RNA helicase DDX47 [Acromyrmex echinatior]
Length = 448
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 244/392 (62%), Positives = 311/392 (79%), Gaps = 11/392 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKT AFALPILQALLE QR +FA +L+PTRELA QISEQF+A
Sbjct: 55 GKDVIGLAETGSGKTAAFALPILQALLE--NPQR----YFALILTPTRELAFQISEQFDA 108
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ VLVGG+DM Q + L K+PHI++ATPGRL+DHL NTKGF+L LK+LV+D
Sbjct: 109 LGSSIGVKTVVLVGGMDMHAQGMILEKKPHIIIATPGRLVDHLENTKGFNLRQLKFLVMD 168
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T LFSATMTKKV+KLQRA L+NPVK+E ++KY T
Sbjct: 169 EADRILNMDFEVEVDKILRVIPRERRTLLFSATMTKKVQKLQRASLRNPVKVEVSTKYQT 228
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P K+KD YLV+IL E++ +S M+F TC+ T AL+LRNLG A+P+
Sbjct: 229 VEKLQQYYIFIPVKFKDVYLVHILNELAGNSFMIFCGTCNNTVRTALLLRNLGFTAVPLH 288
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M+Q+KR+ AL KFKA +ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 289 GQMTQNKRIAALTKFKAKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRT 348
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+ V QY++E Y +IE+LI K+LP FP EEEEV+LL ERV+EA+RI +M +
Sbjct: 349 ARAGRSGRSITFVTQYDVELYQRIEQLISKQLPLFPTEEEEVMLLQERVSEAQRIVKMDM 408
Query: 369 KDSGNK-----RRRKGGDEDDDIGRQFGINKK 395
K+ + R+++GGDEDDD + G+ K+
Sbjct: 409 KNMEDNKKSGKRKKRGGDEDDDTEQSIGVRKR 440
>gi|325191409|emb|CCA26186.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 463
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/378 (61%), Positives = 297/378 (78%), Gaps = 6/378 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+DLIGLA+TGSGKTGAF +PILQ+LL R+ +A VL+PTRELA QISEQFE
Sbjct: 65 AGRDLIGLAETGSGKTGAFVIPILQSLL------RSPQRLYALVLAPTRELAYQISEQFE 118
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
ALG+ I L+CA +VGG+DMM Q +AL ++PHI++ATPGRL+DHL NTKGFSL T+K+LVL
Sbjct: 119 ALGASIGLKCACVVGGIDMMNQQIALARKPHIIIATPGRLVDHLENTKGFSLRTIKFLVL 178
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L+ DFE+ +++I+ ++P R TYLFSATMT KV KLQRA L NP+KIE K++
Sbjct: 179 DEADRMLSMDFEEEINQIVQLMPSERNTYLFSATMTSKVAKLQRASLLNPIKIEITHKFA 238
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
T + L+Q Y F+PAK+KDCYL YIL EV+ S ++F TC+ T+ + LMLRNLG +AI +
Sbjct: 239 TPENLRQHYLFIPAKFKDCYLSYILNEVAGQSILIFASTCNGTQKVTLMLRNLGFQAICL 298
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G MSQ RLGALNKFKA IL+CTDVASRGLDIPSVD+V+NYDIPT+ KDYIHRVGR
Sbjct: 299 HGQMSQPNRLGALNKFKAKTRKILVCTDVASRGLDIPSVDVVMNYDIPTHGKDYIHRVGR 358
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAGR G+A+S V QY++E Y +IE L+GKKL +P +E+ VL++ ERV EA+RI+
Sbjct: 359 TARAGRAGIAVSFVTQYDVELYQRIEFLLGKKLDAYPCDEQTVLIMQERVGEAQRIATNE 418
Query: 368 IKDSGNKRRRKGGDEDDD 385
+K+ +KR ++ E DD
Sbjct: 419 MKELASKRGKRHDRESDD 436
>gi|170046412|ref|XP_001850760.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
gi|167869183|gb|EDS32566.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
Length = 438
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/372 (63%), Positives = 298/372 (80%), Gaps = 10/372 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPILQALLE QR +FA +L+PTRELA QISEQFEA
Sbjct: 33 GKDVIGLAETGSGKTGAFALPILQALLE--NPQR----YFAVILTPTRELAYQISEQFEA 86
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ I ++C V+VGG+DM+ Q L L ++PHI++ATPGRL+DHL NTKGF+L +KYLV+D
Sbjct: 87 LGASIGVKCCVIVGGMDMVSQALQLARKPHIIIATPGRLVDHLENTKGFNLKAVKYLVMD 146
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE LD+IL V+PR R+T+LFSATMTKKVKKL+RA LK+PVK+E +SKY T
Sbjct: 147 EADRILNLDFEVELDKILKVLPRERRTFLFSATMTKKVKKLERASLKDPVKVEVSSKYQT 206
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L Q Y F+PAK+KD YLV+IL E++ +S M+F TC+ T ALMLR LG A+P+
Sbjct: 207 VEKLLQYYVFIPAKFKDVYLVHILNELAGNSFMIFCSTCNNTVRTALMLRALGLAAVPLH 266
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRL +LNKFK + ILI TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 267 GQMSQNKRLASLNKFKGKDRQILISTDVASRGLDIPHVDVVLNFDIPTHSKDYIHRVGRT 326
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR G A++ V QY++E Y +IE L+GKKLPEF EE+EV+ L ERV EA+R +++ +
Sbjct: 327 ARAGRAGKAVTFVTQYDVELYQRIEHLLGKKLPEFKCEEDEVMALQERVGEAQRTARLEL 386
Query: 369 KD----SGNKRR 376
KD G KR+
Sbjct: 387 KDIEERKGMKRK 398
>gi|328771154|gb|EGF81194.1| hypothetical protein BATDEDRAFT_87448 [Batrachochytrium
dendrobatidis JAM81]
Length = 445
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 244/400 (61%), Positives = 304/400 (76%), Gaps = 15/400 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLAQTGSGKT AFALPILQ L ++ +ACV++PTRELA QISEQFEA
Sbjct: 48 GRDIIGLAQTGSGKTAAFALPILQTLFANPQH------LYACVIAPTRELAFQISEQFEA 101
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I +RCAV+VGG+DMM Q++AL K+PH+++ TPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 102 LGSVIGVRCAVIVGGMDMMSQSIALSKKPHVIICTPGRLVDHLENTKGFNLKHLKYLVMD 161
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF ++++L VIPR R TYLFSATMT KV+KLQRA L NPVK+E A+KYST
Sbjct: 162 EADRLLDLDFGAEIEKVLKVIPRERNTYLFSATMTSKVEKLQRASLVNPVKVEVATKYST 221
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTL Q Y F P K K+CYL Y+L E+S + +VFT TC +T+ LALMLRNLG A+ +
Sbjct: 222 VDTLLQYYTFFPYKQKECYLTYLLNELSGQTCIVFTLTCASTQKLALMLRNLGFEAVCLH 281
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G ++Q KRLGAL KFK+G NILI TDVASRGLDIP VD+VINYD+P +SKDYIHRVGRT
Sbjct: 282 GQLTQPKRLGALAKFKSGGRNILIATDVASRGLDIPGVDVVINYDVPQSSKDYIHRVGRT 341
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFP--AEEEEVLLLLERVTEAKRISQM 366
ARAGR+G +I+LV QY++EWY +IE I KKL E+P ++ VL+L ERV+EA R + M
Sbjct: 342 ARAGRSGKSITLVTQYDVEWYQRIEHAIQKKLTEYPFGHDKSAVLMLQERVSEAVRFAHM 401
Query: 367 TIKDS-----GNKRRRKGGDE--DDDIGRQFGINKKKLSK 399
+KD G+KR R G E DD+ + K+K+ K
Sbjct: 402 QLKDENLKHKGSKRGRGGDAEQRDDEESAAKHLTKRKIKK 441
>gi|357627854|gb|EHJ77400.1| hypothetical protein KGM_01171 [Danaus plexippus]
Length = 473
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 240/397 (60%), Positives = 312/397 (78%), Gaps = 10/397 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPILQALLE QR +FA +L+PTRELA QISEQFEA
Sbjct: 74 GKDIIGLAETGSGKTGAFALPILQALLE--NPQR----YFALILTPTRELAFQISEQFEA 127
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ I ++CAV+VGG+DM+ Q L L K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 128 LGASIGVKCAVIVGGMDMVAQALILSKKPHIIIATPGRLVDHLENTKGFNLKALKYLVMD 187
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+TYLFSATMTKKV+KLQRA L++PVK+E ++KY T
Sbjct: 188 EADRILNMDFEVEVDKILRVIPRERRTYLFSATMTKKVQKLQRASLQDPVKVEVSTKYQT 247
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P K+KD YLV+IL E++ +S +VF TC +AL+LR LG A+P+
Sbjct: 248 VEKLQQYYIFIPVKFKDVYLVHILNELAGNSFIVFVSTCAGALRVALLLRALGVGAVPLH 307
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ KRL ALNKFK+ ++LICTDVASRGLDIP VD+V+N DIP +SKDYIHRVGRT
Sbjct: 308 GQMSQQKRLAALNKFKSKARSVLICTDVASRGLDIPHVDVVVNLDIPLHSKDYIHRVGRT 367
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR G AI+ V+QY++E Y +IE+LIGK+LP + +E EV++L ERV EA+R++++ +
Sbjct: 368 ARAGRAGKAITFVSQYDVELYQRIEQLIGKQLPLYKTDENEVMVLQERVAEAQRLTKIEM 427
Query: 369 KD----SGNKRRRKGGDEDDDIGRQFGINKKKLSKRK 401
K+ G++ +++G D DDD G+ ++ K K
Sbjct: 428 KELEDKKGSRGKKRGADSDDDTEEAVGVRRRIKGKNK 464
>gi|320164743|gb|EFW41642.1| DEAD box ATP-dependent RNA helicase [Capsaspora owczarzaki ATCC
30864]
Length = 594
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/389 (59%), Positives = 304/389 (78%), Gaps = 13/389 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKT +FALP+LQ LLE + FA +L+PTRELA QISEQFEA
Sbjct: 183 GRDIIGLAETGSGKTASFALPVLQKLLEKPQ------PLFALILTPTRELAYQISEQFEA 236
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++C V+VGG+DM Q +AL K+PHI++ATPGR++DHL NTKG+ LK+L++D
Sbjct: 237 LGSTIGVKCCVIVGGMDMTTQAIALSKKPHILIATPGRIVDHLENTKGY----LKFLIMD 292
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE+ +D+IL IP+ R TYL+SATMT KV KLQRA L+NPVKIE A+KY T
Sbjct: 293 EADRILNMDFEEEVDKILKAIPKERNTYLYSATMTSKVAKLQRASLRNPVKIEVATKYQT 352
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL QQY F+PA++KDCYL Y L +++ +ST++FT TC + +ALMLRNLG AIP+
Sbjct: 353 VGTLVQQYLFIPARFKDCYLTYALNQLAGNSTIIFTMTCANAQRVALMLRNLGFPAIPLH 412
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G ++Q KRLGALNKFK +IL+ TDVASRGLDIP VD+VINYDIPT+SKDYIHRVGRT
Sbjct: 413 GQLTQPKRLGALNKFKEQSRSILVATDVASRGLDIPHVDLVINYDIPTHSKDYIHRVGRT 472
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I++V QY++E + +IE+LI KK+ + +EEE+VL+LLER +EA+R++ +
Sbjct: 473 ARAGRSGRSITMVTQYDVELFQRIEQLINKKMELYESEEEQVLMLLERTSEAQRMAITQM 532
Query: 369 KDSGNKR--RRKGGDEDDDI-GRQFGINK 394
+D + R +R+G D DDD RQ I K
Sbjct: 533 RDENDPRNGKRRGHDRDDDTEERQHNIGK 561
>gi|195352029|ref|XP_002042518.1| GM23393 [Drosophila sechellia]
gi|194124387|gb|EDW46430.1| GM23393 [Drosophila sechellia]
Length = 519
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 237/362 (65%), Positives = 293/362 (80%), Gaps = 6/362 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPIL ALLE QR +FA VL+PTRELA QI EQFEA
Sbjct: 102 GKDVIGLAETGSGKTGAFALPILHALLE--NPQR----YFALVLTPTRELAFQIGEQFEA 155
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI ++C V+VGG+DM+ Q L L K+PHI++ATPGRL+DHL N KGF+L +KYLV+D
Sbjct: 156 LGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMD 215
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE LD+IL V+PR R+T+LFSATMTKKVKKLQRA LK+PVKIE ++KY T
Sbjct: 216 EADRILNMDFEVELDKILKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKIEVSNKYQT 275
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P KYKD YLV+IL E++ +S M+F TC+ T ALMLR LG AIP+
Sbjct: 276 VEQLQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLH 335
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRL ALNKFK +ILI TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 336 GQMSQNKRLAALNKFKTKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 395
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+LV+QY++E Y +IE L+GK+L + EE+EV+ L ERV EA+R +++ +
Sbjct: 396 ARAGRSGKAITLVSQYDIELYQRIEHLLGKQLTLYKCEEDEVMALQERVAEAQRTAKLEL 455
Query: 369 KD 370
KD
Sbjct: 456 KD 457
>gi|242003922|ref|XP_002422909.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212505802|gb|EEB10171.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 458
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 241/391 (61%), Positives = 304/391 (77%), Gaps = 10/391 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPILQALL+ QR +FA +L+PTRELA QISEQF+A
Sbjct: 59 GRDVIGLAETGSGKTGAFALPILQALLQ--NPQR----YFALILTPTRELAFQISEQFQA 112
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+DMM Q L L K+PH+++ATPGRL+DHL NTKGF+L LK+LV+D
Sbjct: 113 LGSKIGVKTAVIVGGMDMMSQALLLAKKPHVIIATPGRLVDHLENTKGFNLKALKFLVMD 172
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T LFSATMT+KV+KLQRA L +PVK+E +SKY T
Sbjct: 173 EADRILNMDFEVEVDKILKVIPRERRTLLFSATMTQKVQKLQRASLHDPVKVEVSSKYQT 232
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD L+Q Y F+P K+KD YLV I+ E++ ++ M+F TC T AL+LR LG AIP+
Sbjct: 233 VDKLQQYYLFIPVKFKDVYLVSIINEMAGNTFMIFCGTCHNTLRTALLLRQLGFTAIPLH 292
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRLGAL KF+A +ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 293 GQMSQNKRLGALTKFRAKNRSILISTDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRT 352
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E Y +IE+LIGKKLP F EE+EV+ L ERV EA+R S+M +
Sbjct: 353 ARAGRSGKAITFVTQYDVELYQRIEQLIGKKLPLFKIEEDEVMTLQERVAEAQRNSKMEM 412
Query: 369 KDSGNKRRRKG----GDEDDDIGRQFGINKK 395
K + +KG D++DD G+ K+
Sbjct: 413 KHISEMKGKKGIKRKTDDNDDTEESRGVRKR 443
>gi|195580593|ref|XP_002080120.1| GD24302 [Drosophila simulans]
gi|194192129|gb|EDX05705.1| GD24302 [Drosophila simulans]
Length = 519
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 236/362 (65%), Positives = 293/362 (80%), Gaps = 6/362 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPIL ALLE QR +FA VL+PTRELA QI EQFEA
Sbjct: 102 GKDVIGLAETGSGKTGAFALPILHALLE--NPQR----YFALVLTPTRELAFQIGEQFEA 155
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI ++C V+VGG+DM+ Q L L K+PHI++ATPGRL+DHL N KGF+L +KYLV+D
Sbjct: 156 LGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMD 215
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE LD+IL V+PR R+T+LFSATMTKKVKKLQRA LK+PVK+E ++KY T
Sbjct: 216 EADRILNMDFEVELDKILKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQT 275
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P KYKD YLV+IL E++ +S M+F TC+ T ALMLR LG AIP+
Sbjct: 276 VEQLQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLH 335
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRL ALNKFK +ILI TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 336 GQMSQNKRLAALNKFKTKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 395
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+LV+QY++E Y +IE L+GK+L + EE+EV+ L ERV EA+R +++ +
Sbjct: 396 ARAGRSGKAITLVSQYDIELYQRIEHLLGKQLTLYKCEEDEVMALQERVAEAQRTAKLEL 455
Query: 369 KD 370
KD
Sbjct: 456 KD 457
>gi|281204092|gb|EFA78288.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 443
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 231/383 (60%), Positives = 297/383 (77%), Gaps = 8/383 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKD++GLAQTGSGKT AF++P+LQALL F VL+PTRELA+QIS+Q E
Sbjct: 49 AGKDIVGLAQTGSGKTAAFSIPMLQALLAKPS------GLFGLVLAPTRELAVQISDQIE 102
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
ALG+ I ++CAVLVGG+D M Q++AL K+PHI+V TPGR++ HL NTKGF+L TLKY V+
Sbjct: 103 ALGAVIGVKCAVLVGGIDTMSQSMALAKKPHIIVGTPGRVVYHLENTKGFNLKTLKYFVM 162
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADRLL DFE+ ++ IL VIP+ R T+LFSATMT KV KLQRA L +PVKI+ A+KYS
Sbjct: 163 DEADRLLGMDFEEEINTILKVIPKDRNTFLFSATMTSKVAKLQRASLNDPVKIQVATKYS 222
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL+Q+Y F+P K+K+CYL YIL E++ +S ++FT TC A+ LA+MLRNL +AIPI
Sbjct: 223 TVDTLQQEYIFIPYKHKECYLTYILNELAGNSVIIFTSTCAASTKLAIMLRNLSFKAIPI 282
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
+G M QSKRL +LNKFKA +IL+ TDVA+RGLDIPSVD+VINYD+P +SK+Y+HRVGR
Sbjct: 283 NGQMDQSKRLSSLNKFKAQTMDILVATDVAARGLDIPSVDLVINYDVPVSSKEYMHRVGR 342
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAGRTG A++LV QY++E YL+IE + +KL EFP E+E VL+ ERV EA R++
Sbjct: 343 TARAGRTGRAVTLVTQYDVEIYLRIEHALEQKLEEFPTEQESVLVFSERVNEAIRVATNE 402
Query: 368 IKDSG--NKRRRKGGDEDDDIGR 388
IK++G K +R D + G
Sbjct: 403 IKEAGLSEKEKRSMDDSEQSTGH 425
>gi|170583206|ref|XP_001896476.1| ATP-dependent RNA helicase T26G10.1 in chromosome III [Brugia
malayi]
gi|158596304|gb|EDP34674.1| ATP-dependent RNA helicase T26G10.1 in chromosome III, putative
[Brugia malayi]
Length = 462
Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust.
Identities = 230/369 (62%), Positives = 292/369 (79%), Gaps = 6/369 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IGLA+TGSGKT AFA+PILQALLE + FA VL+PTRELA QI EQFEAL
Sbjct: 62 RDIIGLAETGSGKTAAFAIPILQALLETPQK------LFALVLTPTRELAFQIGEQFEAL 115
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
G+ I + AV+VGGVD + Q+LAL KRPH++VATPGRL+DHL NTKGF+L LKYLV+DE
Sbjct: 116 GASIGILIAVIVGGVDTVTQSLALAKRPHVIVATPGRLVDHLENTKGFNLRALKYLVMDE 175
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADR+LN DFE L++IL VIP+ R+TYL+SATMTKKV KL+RA L +PV+IE +SKY TV
Sbjct: 176 ADRILNMDFEVELEKILKVIPKERRTYLYSATMTKKVAKLERASLNDPVRIEVSSKYQTV 235
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
D LKQ Y F+P KYK+ YL+YIL E++ + +VF TC + ALMLR LG A+P+ G
Sbjct: 236 DKLKQYYIFIPYKYKEAYLIYILNEMAGQTAIVFCSTCASALKTALMLRKLGFGAVPLHG 295
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
MSQ+KRLG+LNKFK+ +L+CTDVASRGLDIP VD+V+NYD+PT SKDY+HRVGRTA
Sbjct: 296 QMSQAKRLGSLNKFKSKASTVLVCTDVASRGLDIPHVDIVLNYDVPTQSKDYVHRVGRTA 355
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK 369
RAGR+GVAI+ V QY++E Y +IE+LIGKKLP F E +V+LL+ERV EA+++++ +K
Sbjct: 356 RAGRSGVAITFVTQYDVEIYQKIERLIGKKLPLFETVENDVMLLVERVEEAQKLAKQEMK 415
Query: 370 DSGNKRRRK 378
+ K+ RK
Sbjct: 416 EMEEKKGRK 424
>gi|312370859|gb|EFR19169.1| hypothetical protein AND_22947 [Anopheles darlingi]
Length = 490
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/399 (60%), Positives = 301/399 (75%), Gaps = 16/399 (4%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKT AFALPILQALL+ QR +FA VL+PTRELA QISEQFEA
Sbjct: 85 GKDIIGLAETGSGKTAAFALPILQALLD--NPQR----YFAVVLTPTRELAYQISEQFEA 138
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ I ++C V+VGG+D++ Q L L ++PHI++ATPGRL+DHL NTKGF L LKYLV+D
Sbjct: 139 LGTMIGVKCCVVVGGMDLVAQALQLARKPHIIIATPGRLVDHLENTKGFGLKALKYLVMD 198
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +++IL VIPR R+T+LFSATMTKKVKKL+RA L++PVK+E +SKY T
Sbjct: 199 EADRILNMDFEVEVNKILRVIPRERRTFLFSATMTKKVKKLERASLRDPVKVEVSSKYQT 258
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD L Q Y F+PAKYKD YLV+IL E++ +S M+F TC+ T ALMLR LG A+P+
Sbjct: 259 VDKLLQYYIFIPAKYKDVYLVHILNELAGNSFMIFCSTCNNTVRTALMLRALGLAAVPLH 318
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M+Q+KRL ALNKFK+ ILI TDVASRGLDIP VD+V+N DIP +SKDYIHRVGRT
Sbjct: 319 GQMTQNKRLAALNKFKSQTRQILISTDVASRGLDIPHVDVVLNLDIPMHSKDYIHRVGRT 378
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR G AI+ V QY++E Y +IE L+ KKLPE+ EE+EV+ L ERV EA+R ++M
Sbjct: 379 ARAGRAGQAITFVTQYDVELYQRIEHLLSKKLPEYKCEEDEVMALQERVAEAQRTARMEQ 438
Query: 369 KDSGNKRRRKGGD----------EDDDIGRQFGINKKKL 397
KD ++ KG DDD QF +K+L
Sbjct: 439 KDIEERKASKGAKGKRGAATAAGSDDDDTEQFNGARKRL 477
>gi|17555296|ref|NP_499069.1| Protein T26G10.1 [Caenorhabditis elegans]
gi|465975|sp|P34580.1|DDX47_CAEEL RecName: Full=Putative ATP-dependent RNA helicase T26G10.1
gi|3880293|emb|CAA82362.1| Protein T26G10.1 [Caenorhabditis elegans]
Length = 489
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 234/388 (60%), Positives = 299/388 (77%), Gaps = 14/388 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFA+P+LQ+LL+ + AFF VL+PTRELA QI +QFEA
Sbjct: 81 GKDVIGLAETGSGKTGAFAIPVLQSLLDHPQ------AFFCLVLTPTRELAFQIGQQFEA 134
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI L AV+VGGVDM Q +AL +RPHI+VATPGRL+DHL NTKGF+L LK+L++D
Sbjct: 135 LGSGIGLIAAVIVGGVDMAAQAMALARRPHIIVATPGRLVDHLENTKGFNLKALKFLIMD 194
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE LD+IL VIPR R+TYLFSATMTKKV KL+RA L++P ++ +S+Y T
Sbjct: 195 EADRILNMDFEVELDKILKVIPRERRTYLFSATMTKKVSKLERASLRDPARVSVSSRYKT 254
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD LKQ Y FVP KYK+ YLVY+L E + +S +VF TC T +A+MLR LG +A+P+
Sbjct: 255 VDNLKQHYIFVPNKYKETYLVYLLNEHAGNSAIVFCATCATTMQIAVMLRQLGMQAVPLH 314
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ KRLG+LNKFK+ IL+CTDVA+RGLDIP VDMVINYD+P+ SKDY+HRVGRT
Sbjct: 315 GQMSQEKRLGSLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRT 374
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G+AI++V QY++E Y +IE +GKKL E+ E EV++L+ER EA +++ +
Sbjct: 375 ARAGRSGIAITVVTQYDVEAYQKIEANLGKKLDEYKCVENEVMVLVERTQEATENARIEM 434
Query: 369 KD------SGNKRRRKG--GDEDDDIGR 388
K+ SG KRR+ GD ++ GR
Sbjct: 435 KEMDEKKKSGKKRRQNDDFGDTEESGGR 462
>gi|322795370|gb|EFZ18163.1| hypothetical protein SINV_10215 [Solenopsis invicta]
Length = 410
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/387 (62%), Positives = 305/387 (78%), Gaps = 11/387 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKT AFALPILQALLE + QR +FA +L+PTRELA QISEQF+A
Sbjct: 32 GKDVIGLAETGSGKTAAFALPILQALLE--QPQR----YFALILTPTRELAFQISEQFDA 85
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + ++ VLVGG+DM Q + L K+PHI++ATPGRL+DHL NTKGF+L LK+LV+D
Sbjct: 86 LGSSMGVKTVVLVGGMDMHAQGMILEKKPHIIIATPGRLVDHLENTKGFNLRQLKFLVMD 145
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T LFSATMTKKV+KLQRA L+NPV++E ++KY T
Sbjct: 146 EADRILNMDFEVEVDKILRVIPRERRTLLFSATMTKKVQKLQRASLRNPVRVEVSTKYQT 205
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P K+KD YLV+IL E++ +S M+F TC+ T AL+LRNLG A+P+
Sbjct: 206 VEKLQQYYIFIPVKFKDVYLVHILNELAGNSFMIFCGTCNNTVRTALLLRNLGFTAVPLH 265
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KR+ AL KFKA +ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 266 GQMSQNKRIAALTKFKAKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRT 325
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+ V QY++E Y +IE+LI K+LP +P EEEEV+LL ER + K I +
Sbjct: 326 ARAGRSGRSITFVTQYDVELYQRIEQLISKQLPLYPTEEEEVMLLQER--DMKNIEEN-- 381
Query: 369 KDSGNKRRRKGGDEDDDIGRQFGINKK 395
K SG KR+R G +EDDD + G+ K+
Sbjct: 382 KKSG-KRKRGGNNEDDDTEQSIGVRKR 407
>gi|332375408|gb|AEE62845.1| unknown [Dendroctonus ponderosae]
Length = 469
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/362 (64%), Positives = 290/362 (80%), Gaps = 6/362 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKT AFALPILQALLE + FA +L+PTRELA QISEQFEA
Sbjct: 76 GKDIIGLAETGSGKTAAFALPILQALLENPQRH------FALILTPTRELAFQISEQFEA 129
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI ++ V+VGG+DM Q L L K+PHI++ATPGRL+DHL+NTKGF+L LK+LV+D
Sbjct: 130 LGSGIGVKSIVIVGGLDMTSQALMLAKKPHIIIATPGRLVDHLSNTKGFNLRALKFLVMD 189
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV KLQRACL++PV++E ++KY T
Sbjct: 190 EADRILNMDFEAEVDKILKVIPRERRTFLFSATMTKKVNKLQRACLQDPVRVEVSTKYQT 249
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L Q Y F+PAK+KD YLV+IL E + +S MVF TC+ T AL+LRNLG A+P+
Sbjct: 250 VEKLLQYYVFIPAKFKDVYLVHILNENAGNSFMVFCSTCNNTIRTALLLRNLGFTAVPLH 309
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRL AL KFKA +ILI TDVASRGLDIP VD+VIN+DIP +SKDYIHRVGRT
Sbjct: 310 GQMSQNKRLAALTKFKAKNRSILISTDVASRGLDIPHVDIVINFDIPMHSKDYIHRVGRT 369
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E Y +IE LIGK+LP + EEEEV+ L ERV E++RI++ +
Sbjct: 370 ARAGRSGKAITFVTQYDVELYQRIEHLIGKQLPLYKTEEEEVMGLQERVEESQRIAKTEL 429
Query: 369 KD 370
+D
Sbjct: 430 RD 431
>gi|402590562|gb|EJW84492.1| DEAD box ATP-dependent RNA helicase [Wuchereria bancrofti]
Length = 462
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/369 (61%), Positives = 292/369 (79%), Gaps = 6/369 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IGLA+TGSGKT AFA+PILQALLE + FA VL+PTRELA QI EQFEAL
Sbjct: 62 RDIIGLAETGSGKTAAFAIPILQALLETPQK------LFALVLTPTRELAFQIGEQFEAL 115
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
G+ I + AV+VGG+D + Q+LAL KRPH++VATPGRL+DHL NTKGF+L LKYLV+DE
Sbjct: 116 GASIGILIAVIVGGIDTVTQSLALAKRPHVIVATPGRLVDHLENTKGFNLRALKYLVMDE 175
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADR+LN DFE L++IL VIP+ R+TYL+SATMTKKV KL+RA L +PV+IE +SKY TV
Sbjct: 176 ADRILNMDFEVELEKILKVIPKERRTYLYSATMTKKVAKLERASLVDPVRIEVSSKYQTV 235
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
D LKQ Y F+P KYK+ YL+YIL E++ + +VF TC + ALMLR LG A+P+ G
Sbjct: 236 DKLKQYYIFIPYKYKEAYLIYILNEMAGQTAIVFCSTCASALKTALMLRKLGFGAVPLHG 295
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
MSQ+KRLG+LNKFK+ +L+CTDVASRGLDIP VD+V+NYD+PT SKDY+HRVGRTA
Sbjct: 296 QMSQAKRLGSLNKFKSKASTVLVCTDVASRGLDIPHVDIVLNYDVPTQSKDYVHRVGRTA 355
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK 369
RAGR+GVA++ V QY++E Y +IE+LIGKKLP F E +V+LL+ERV EA+++++ +K
Sbjct: 356 RAGRSGVAVTFVTQYDVEIYQKIERLIGKKLPLFETVENDVMLLVERVEEAQKLAKQEMK 415
Query: 370 DSGNKRRRK 378
+ K+ RK
Sbjct: 416 EMEEKKGRK 424
>gi|312083101|ref|XP_003143720.1| ATP-dependent RNA helicase in chromosome III [Loa loa]
gi|307761116|gb|EFO20350.1| ATP-dependent RNA helicase in chromosome III [Loa loa]
Length = 463
Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust.
Identities = 230/369 (62%), Positives = 291/369 (78%), Gaps = 6/369 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IGLA+TGSGKT AFA+PILQALLE + FA VL+PTRELA QI EQFEAL
Sbjct: 62 RDIIGLAETGSGKTAAFAIPILQALLETPQK------LFALVLTPTRELAFQIGEQFEAL 115
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
G+ I + AV+VGGVD + Q+LAL KRPH++VATPGRL+DHL NTKGF+L LKYLV+DE
Sbjct: 116 GASIGILIAVIVGGVDTVTQSLALAKRPHVIVATPGRLVDHLENTKGFNLRALKYLVMDE 175
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADR+LN DFE +++IL VIP+ R+TYL+SATMTKKV KL+RA L +PV+IE +SKY TV
Sbjct: 176 ADRILNMDFEVEVEKILKVIPKERRTYLYSATMTKKVAKLERASLNDPVRIEVSSKYQTV 235
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
D LKQ Y F+P KYK+ YLVYIL E++ + +VF TC + ALMLR LG A+P+ G
Sbjct: 236 DKLKQYYIFIPYKYKEAYLVYILNEMAGQTAIVFCSTCVSALRTALMLRKLGFGAVPLHG 295
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
MSQ+KRLG+LNKFK+ LICTDVASRGLDIP VD+V+NYD+PT SKDY+HRVGRTA
Sbjct: 296 QMSQAKRLGSLNKFKSKTSTTLICTDVASRGLDIPHVDLVLNYDVPTQSKDYVHRVGRTA 355
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK 369
RAGR+GVA++ V QY++E Y +IE+LIGKKLP F E +V+LL+ERV EA+++++ +K
Sbjct: 356 RAGRSGVAVTFVTQYDVEIYQRIERLIGKKLPLFETVENDVMLLMERVEEAQKLAKREMK 415
Query: 370 DSGNKRRRK 378
+ K+ RK
Sbjct: 416 EMEEKKGRK 424
>gi|391344138|ref|XP_003746360.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Metaseiulus occidentalis]
Length = 461
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 232/364 (63%), Positives = 295/364 (81%), Gaps = 9/364 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPA-FFACVLSPTRELAIQISEQFE 67
G+D+IGLA+TGSGKT AFALPILQALLE PA FA +L+PTRELA QISEQFE
Sbjct: 67 GRDIIGLAETGSGKTAAFALPILQALLE-------NPARLFALILTPTRELAFQISEQFE 119
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
ALGS I ++ AV+VGG+DMM Q + L K+PH+V+ATPGRL+DHL NTKGF+L L+YLV+
Sbjct: 120 ALGSTIGIKSAVIVGGIDMMTQAMMLAKKPHVVIATPGRLIDHLENTKGFTLKNLRYLVM 179
Query: 128 DEADRLLNDDFEKSLDEILNVIPRM-RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
DEADR+LN DFE+ +D+IL VIPR R+TYL+SATMTKKV KLQRA L +PV++E ++KY
Sbjct: 180 DEADRILNMDFEEEVDKILKVIPRENRRTYLYSATMTKKVAKLQRASLTDPVRVEVSTKY 239
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
TVD L+Q Y F+PAKYK+ +LV++L +++ S +VF TC+ T+ LALMLRNLG AIP
Sbjct: 240 QTVDKLQQYYLFIPAKYKEVHLVHLLQDLAGQSFIVFCATCNGTQKLALMLRNLGFTAIP 299
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
+ G MSQ+KRLGAL KFKA NIL+ TDVA+RGLDIP VD+VINYDIPT+SKDYIHRVG
Sbjct: 300 LHGQMSQAKRLGALQKFKAQARNILLATDVAARGLDIPHVDVVINYDIPTHSKDYIHRVG 359
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQM 366
RTARAGR+G A++ V+QY++E Y +IE LIGK+LP++ E EVL+L ERV EA+R ++
Sbjct: 360 RTARAGRSGKAVTFVSQYDVELYQRIEHLIGKQLPKYDVLEREVLVLEERVQEAQRFARQ 419
Query: 367 TIKD 370
+++
Sbjct: 420 EMRE 423
>gi|158298749|ref|XP_318913.4| AGAP009808-PA [Anopheles gambiae str. PEST]
gi|157014035|gb|EAA14161.4| AGAP009808-PA [Anopheles gambiae str. PEST]
Length = 510
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 234/394 (59%), Positives = 306/394 (77%), Gaps = 11/394 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPILQALL+ QR +FA VL+PTRELA QISEQFEA
Sbjct: 93 GKDIIGLAETGSGKTGAFALPILQALLD--NPQR----YFAVVLTPTRELAYQISEQFEA 146
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ I ++C V+VGG+D++ Q + L ++PHI++ATPGRL+DHL NTKGFSL ++YLV+D
Sbjct: 147 LGATIGVKCCVIVGGMDLVTQAIQLARKPHIIIATPGRLVDHLENTKGFSLKAIRYLVMD 206
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE+ +++IL V+PR R+T+LFSATMTKKVKKL+RA L++PVK+E +SKY T
Sbjct: 207 EADRILNMDFEEEVNKILKVMPRERRTFLFSATMTKKVKKLERASLRDPVKVEVSSKYQT 266
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L Q Y F+PA+YK+ YLV++L E++ +S M+F TC+ T ALMLR LG A+P+
Sbjct: 267 VEKLLQYYLFIPARYKNVYLVHVLNELAGNSFMIFCSTCNNTVRTALMLRALGLAAVPLH 326
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M+Q+KRL ALNKFK+ ILI TDVASRGLDIP VD+V+N DIP +SKDYIHRVGRT
Sbjct: 327 GQMTQNKRLAALNKFKSQARQILISTDVASRGLDIPHVDVVLNLDIPMHSKDYIHRVGRT 386
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR G AI+ V QY++E Y +IE L+GKKLPE+ E++EV+ L ERV EA R +++
Sbjct: 387 ARAGRAGQAITFVTQYDVELYQRIEHLLGKKLPEYKCEQDEVMALQERVAEAHRTARIEQ 446
Query: 369 KDSGNKRRRKGG-----DEDDDIGRQFGINKKKL 397
+D ++ KGG D D++ QF +K+L
Sbjct: 447 RDIEERKASKGGKRGANDSDEEDTEQFNGVRKRL 480
>gi|341877652|gb|EGT33587.1| hypothetical protein CAEBREN_24452 [Caenorhabditis brenneri]
Length = 491
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 233/388 (60%), Positives = 299/388 (77%), Gaps = 14/388 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFA+P+LQ+LL+ + AFF VL+PTRELA QI +QFEA
Sbjct: 81 GKDVIGLAETGSGKTGAFAIPVLQSLLDHPQ------AFFCLVLTPTRELAFQIGQQFEA 134
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI L AV+VGGVDM Q +AL +RPHI+VATPGRL+DHL NTKGF+L LK+L++D
Sbjct: 135 LGSGIGLIVAVIVGGVDMAAQAMALARRPHIIVATPGRLVDHLENTKGFNLKALKFLIMD 194
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE LD+IL VIPR R+TYLFSATMTKKV KL+RA L++P ++ +++Y T
Sbjct: 195 EADRILNMDFEVELDKILKVIPRERRTYLFSATMTKKVSKLERASLRDPARVSISTRYKT 254
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD LKQ Y FVP KYK+ YLVY+L E + +S +VF TC T +A+MLR LG +A+P+
Sbjct: 255 VDNLKQHYIFVPNKYKETYLVYLLNEHAGNSAIVFCATCATTMQVAVMLRQLGMQAVPLH 314
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ KRLG+LNKFK+ IL+CTDVA+RGLDIP VDMVINYD+P+ SKDY+HRVGRT
Sbjct: 315 GQMSQEKRLGSLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRT 374
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G+AI++V QY++E Y +IE +GKKL E+ E EV++L+ER EA +++ +
Sbjct: 375 ARAGRSGLAITVVTQYDVEAYQKIEANLGKKLDEYKCVENEVMVLVERTQEAMENAKIEM 434
Query: 369 KD------SGNKRRRKG--GDEDDDIGR 388
K+ SG KRR+ GD ++ GR
Sbjct: 435 KEMDEKRKSGKKRRQNDDFGDTEESSGR 462
>gi|146163668|ref|XP_001012102.2| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|146145909|gb|EAR91857.2| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 533
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 229/376 (60%), Positives = 289/376 (76%), Gaps = 6/376 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+I LA+TGSGKT AFALP++Q LL+ + F+A VLSPTREL +QI+E FEAL
Sbjct: 134 RDIIALAETGSGKTLAFALPVIQNLLDAPQ------PFYALVLSPTRELCMQIAEHFEAL 187
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
G GISL+ V+VGG+D M Q +AL K+PHI++ TPGR++ H+ NTKGF+ LK+LVLDE
Sbjct: 188 GVGISLKTTVIVGGLDPMAQAIALSKKPHIIIGTPGRILYHMQNTKGFNFKALKFLVLDE 247
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
AD+LLN DFEK +++IL++IP+ R T+LFSATMT KV KLQRA LK+PVKIE +SKY V
Sbjct: 248 ADKLLNMDFEKDINQILDIIPKKRNTFLFSATMTNKVHKLQRASLKDPVKIEVSSKYQMV 307
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
TL QY F+PAKYKDCYLVY L E + +++++F +TC L LMLRNLG A+ I G
Sbjct: 308 STLVAQYAFIPAKYKDCYLVYSLNEFAGNTSIIFVQTCLNAIKLTLMLRNLGFSAVTIHG 367
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
MSQ KRLGA+NKFK+GE IL+ TDVASRGLDIPSVD+VINYDIPTN+K+Y+HRVGRTA
Sbjct: 368 QMSQVKRLGAINKFKSGEKKILVATDVASRGLDIPSVDLVINYDIPTNAKEYVHRVGRTA 427
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK 369
RAGR G AIS V QY++E YL+IE LIGKKL ++ EE +VL+ ERV EA+RI+ IK
Sbjct: 428 RAGRAGKAISFVTQYDVEMYLKIEALIGKKLDQYKCEEYQVLVFNERVQEAQRIAAQEIK 487
Query: 370 DSGNKRRRKGGDEDDD 385
+ K+ D DD+
Sbjct: 488 EIMEKKNNPLHDVDDE 503
>gi|268573560|ref|XP_002641757.1| Hypothetical protein CBG10097 [Caenorhabditis briggsae]
Length = 486
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 231/388 (59%), Positives = 300/388 (77%), Gaps = 14/388 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFA+P+LQ+LL+ + AFF VL+PTRELA QI +QFEA
Sbjct: 81 GKDVIGLAETGSGKTGAFAIPVLQSLLDHPQ------AFFCLVLTPTRELAFQIGQQFEA 134
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI L AV+VGGVDM Q +AL +RPHI+VATPGRL+DHL NTKGF+L LK+L++D
Sbjct: 135 LGSGIGLIVAVIVGGVDMAAQAMALARRPHIIVATPGRLVDHLENTKGFNLKALKFLIMD 194
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE LD+IL VIP+ R+TYLFSATMTKKV KL+RA L++P ++ +++Y T
Sbjct: 195 EADRILNMDFEVELDKILKVIPKERRTYLFSATMTKKVSKLERASLRDPARVSISTRYKT 254
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD LKQ Y F+P KYK+ YLVY+L E + +S +VF TC T +A+MLR LG +A+P+
Sbjct: 255 VDNLKQHYIFIPNKYKETYLVYLLNEHAGNSAIVFCATCATTMQVAVMLRQLGMQAVPLH 314
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ KRLG+LNKFK+ IL+CTDVA+RGLDIP VDMVINYD+P+ SKDY+HRVGRT
Sbjct: 315 GQMSQEKRLGSLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRT 374
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G+AI++V QY++E Y +IE +GKKL E+ E EV++L+ER EA +++ +
Sbjct: 375 ARAGRSGLAITVVTQYDVEAYQKIEANLGKKLDEYKCVENEVMVLVERTQEAMENAKVEM 434
Query: 369 KD------SGNKRRRKG--GDEDDDIGR 388
K+ SG KRR+ GD +++ GR
Sbjct: 435 KEMDEKRKSGKKRRQNDDFGDTEENSGR 462
>gi|297738293|emb|CBI27494.3| unnamed protein product [Vitis vinifera]
Length = 298
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 251/298 (84%), Positives = 278/298 (93%), Gaps = 5/298 (1%)
Query: 108 MDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVK 167
MDHL+NTKGFSL T+KYLVLDEADRLLNDDFEK++DEIL+VIP+ R+TYLFSATMTKKV+
Sbjct: 1 MDHLSNTKGFSLRTMKYLVLDEADRLLNDDFEKAIDEILSVIPQERKTYLFSATMTKKVR 60
Query: 168 KLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTC 227
KLQRACL+NPVKIEA SKYSTVDTLKQQYRFVPAKYK+CYLVYILTE+S S+TMVFTRTC
Sbjct: 61 KLQRACLRNPVKIEAGSKYSTVDTLKQQYRFVPAKYKECYLVYILTELSGSTTMVFTRTC 120
Query: 228 DATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVD 287
DATRLLAL+LRNLG AIPISGHMSQ+KRLGALNKFKAGECNILICTDVASRGLDIPSVD
Sbjct: 121 DATRLLALLLRNLGLGAIPISGHMSQTKRLGALNKFKAGECNILICTDVASRGLDIPSVD 180
Query: 288 MVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEE 347
MVINYDIP+NSKDYIHRVGRTA AGR+GVAISLVNQYELEWY+QIEKLIGKKLPEFPA+E
Sbjct: 181 MVINYDIPSNSKDYIHRVGRTAHAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEFPAQE 240
Query: 348 EEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDE-DDDIGRQF----GINKKKLSKR 400
EEVLLLLERVTEAKRISQM IK++G K++R+GGDE +++I R G + KKL KR
Sbjct: 241 EEVLLLLERVTEAKRISQMKIKETGGKKKRRGGDEGEEEIDRYLASKNGKSSKKLKKR 298
>gi|413934954|gb|AFW69505.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 432
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 234/356 (65%), Positives = 283/356 (79%), Gaps = 28/356 (7%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDLI LAQTGSGKTGAFALPILQ LL N++ +FFACVLSPTRELAIQI+EQFEA
Sbjct: 61 GKDLIALAQTGSGKTGAFALPILQELLS---NRQAEQSFFACVLSPTRELAIQIAEQFEA 117
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I LRC+VLVGGVD +QQ L++GKRPHIVV LD
Sbjct: 118 LGSAIGLRCSVLVGGVDRVQQVLSIGKRPHIVV-------------------------LD 152
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD+LLN +FEKSLD+IL+ +P+ R+T+LFSATMTKKV KLQRACL+NP K+E +SKYST
Sbjct: 153 EADKLLNVEFEKSLDDILSEMPKDRRTFLFSATMTKKVNKLQRACLRNPAKVEVSSKYST 212
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD+LKQ++ FVPA KDCYL+++L E S M+F RTC++TRLLALMLRNLG +A+ IS
Sbjct: 213 VDSLKQEFYFVPADDKDCYLLHVLNERLESMIMIFVRTCESTRLLALMLRNLGLKAMSIS 272
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ KRLGALN+FKA +CNILICTDVASRGLDI VDMVINYDIP NSKDY+HRVGRT
Sbjct: 273 GQMSQDKRLGALNRFKAKDCNILICTDVASRGLDIQGVDMVINYDIPMNSKDYVHRVGRT 332
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRIS 364
ARAGR+G A+SLVNQYE +W++ IE+L+GKK+ + + +EVL+L +++AKRI+
Sbjct: 333 ARAGRSGYAVSLVNQYEAQWFVLIEQLLGKKIDQCKVDRDEVLILKGPISDAKRIA 388
>gi|388502288|gb|AFK39210.1| unknown [Lotus japonicus]
Length = 460
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/386 (62%), Positives = 301/386 (77%), Gaps = 15/386 (3%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IGLA+TGSGKTGAFALPILQALL A QR FA VL+PTRELA QISEQFEAL
Sbjct: 48 RDIIGLAETGSGKTGAFALPILQALL--ATPQR----LFALVLTPTRELAYQISEQFEAL 101
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GS I ++CAV+VGG+DMM Q++AL K+PHIV+ATPGRL+DHL NTKGFSL +++YLV+DE
Sbjct: 102 GSSIGVKCAVIVGGMDMMSQSIALAKKPHIVIATPGRLVDHLENTKGFSLRSIQYLVMDE 161
Query: 130 ADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
ADR+LN DFE LD+IL ++P R TYL+SATMTKKV KLQRA L++P+KIE + KY+
Sbjct: 162 ADRILNMDFEVDLDKILKILPPSSTRSTYLYSATMTKKVAKLQRASLRDPIKIEVSDKYA 221
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVD L+Q Y F+P+K+KD YLV IL ++S S +VF TC T LAL+ RNLG +P+
Sbjct: 222 TVDKLQQTYLFIPSKFKDVYLVSILNDMSGKSIIVFASTCTTTLRLALLTRNLGFTTVPL 281
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G MSQ+KRLGALNKFK +ILI TDVASRGLDIP VD+VINYDIP +SKDYIHRVGR
Sbjct: 282 HGQMSQTKRLGALNKFKGKARSILIATDVASRGLDIPHVDVVINYDIPNHSKDYIHRVGR 341
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAGR+G +I+ V QY++E Y +IE LIGK+LP++ +E+EV+ LLERV EA R +++
Sbjct: 342 TARAGRSGKSITFVTQYDIELYQRIEFLIGKQLPQYVTQEDEVMTLLERVNEADRQARIQ 401
Query: 368 I-------KDSGNKRRRKGGDEDDDI 386
+ KD KR++K + DDI
Sbjct: 402 MKEIEDERKDHRQKRKKKEQNNHDDI 427
>gi|358060304|dbj|GAA94058.1| hypothetical protein E5Q_00705 [Mixia osmundae IAM 14324]
Length = 447
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/368 (63%), Positives = 287/368 (77%), Gaps = 6/368 (1%)
Query: 5 FCDAGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISE 64
F G+DL+ LAQTGSGKT AFALPILQAL N+ + FFACVL+PTRELA QISE
Sbjct: 45 FALQGRDLVALAQTGSGKTAAFALPILQALW----NEPS--PFFACVLAPTRELAYQISE 98
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
QF+ALGS I +RCAV+VGG+DMM Q++AL KRPHI+VATPGRL DHL NTKGFSL +KY
Sbjct: 99 QFQALGSTIGVRCAVIVGGMDMMTQSIALSKRPHIIVATPGRLQDHLENTKGFSLKAIKY 158
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LV+DEADRLL+ DF +D IL +IPR R T+LFSATMT KV KLQRA L NPVK+E ++
Sbjct: 159 LVMDEADRLLDMDFGPVIDTILKIIPRERNTFLFSATMTTKVAKLQRASLSNPVKVEVST 218
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
KYSTVDTL Q+Y F P K+K+ YLVY+ E++ S +VF RT + L+L+LR LG A
Sbjct: 219 KYSTVDTLVQEYCFFPFKHKETYLVYLCNELAGKSIIVFVRTVHDAQRLSLILRTLGFPA 278
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
+P+ G ++QS RLGALNKFK+G IL+ TDVASRGLDIP VD V+NYDIPT+SKDYIHR
Sbjct: 279 VPLHGQLTQSNRLGALNKFKSGGRQILVATDVASRGLDIPMVDYVVNYDIPTHSKDYIHR 338
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRIS 364
VGRTARAGR+G +I+LV QY++E +IE ++GKK+ EF ++E VL+L ERVTEA R +
Sbjct: 339 VGRTARAGRSGKSITLVTQYDVELLQRIEGVVGKKMSEFAHDKEAVLVLSERVTEAAREA 398
Query: 365 QMTIKDSG 372
I++ G
Sbjct: 399 AREIREKG 406
>gi|328870452|gb|EGG18826.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 507
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/364 (61%), Positives = 288/364 (79%), Gaps = 7/364 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D+IGLAQTGSGKT AFA+PILQ LL+ + FA +LSPTRELA QIS+QFE
Sbjct: 118 AGRDIIGLAQTGSGKTAAFAIPILQQLLQSPQ------PLFALILSPTRELAFQISQQFE 171
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
ALG+ I ++C VLVGG+D+MQQ + L ++PHI+V TPGR+M HL NTKGF L LK+LV+
Sbjct: 172 ALGAVIGVKCGVLVGGMDVMQQAMVLARKPHIIVGTPGRVMYHLENTKGFHLKALKFLVM 231
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KY 186
DEADRLL+ DFE+ +++IL VIP+ R TYLFSATMT KV KLQ+A L NP+K++ AS KY
Sbjct: 232 DEADRLLSMDFEEEINKILKVIPKNRNTYLFSATMTSKVAKLQKASLVNPIKVQVASTKY 291
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
STVDTL QQY F+P ++KDCYL YIL E+S +S +VF TC A+ L++MLRNLG AIP
Sbjct: 292 STVDTLVQQYCFIPYQHKDCYLTYILNELSGNSAIVFVATCAASNRLSVMLRNLGLGAIP 351
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
I+G+M Q+KRL +LNKFK+ NIL+ TDVA+RGLDIPSV +V+NYDIP NSK+Y+HRVG
Sbjct: 352 INGNMDQTKRLASLNKFKSSVKNILVATDVAARGLDIPSVGLVVNYDIPVNSKEYVHRVG 411
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQM 366
RTARAG++G AI+LV QY++E Y +IE + KKL EFP+E VL+ LE V EA R++ +
Sbjct: 412 RTARAGQSGRAITLVTQYDVEVYQRIEFALSKKLEEFPSESSSVLVFLEAVNEAARLASL 471
Query: 367 TIKD 370
+K+
Sbjct: 472 EVKE 475
>gi|296824198|ref|XP_002850600.1| ATP-dependent rRNA helicase RRP3 [Arthroderma otae CBS 113480]
gi|238838154|gb|EEQ27816.1| ATP-dependent rRNA helicase RRP3 [Arthroderma otae CBS 113480]
Length = 474
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/373 (61%), Positives = 296/373 (79%), Gaps = 7/373 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DL+GLA+TGSGKT AFALPILQAL+E + +F VL+PTRELA+QISE FEA
Sbjct: 86 GRDLVGLAETGSGKTAAFALPILQALMEKPQ------PYFGLVLAPTRELAVQISEAFEA 139
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS IS+RCAV+VGG+DM+ Q+++LGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+D
Sbjct: 140 LGSLISVRCAVIVGGMDMISQSISLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMD 199
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF LD+IL V+PR R+TYLFSAT++ KV+ LQRA L NP+++ +S KY
Sbjct: 200 EADRLLDLDFGPVLDKILKVLPRERRTYLFSATLSSKVESLQRASLSNPLRVSISSNKYQ 259
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P KYKD YLV+IL E ST++FTRT + T+ LA++LR LG AIP+
Sbjct: 260 TVSTLLQSYIFIPHKYKDVYLVHILNEFPGQSTIIFTRTVNETQRLAILLRALGFGAIPL 319
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL KF++G NIL+ TDVA+RGLDIP+VD+V+N+D+P++SK YIHRVGR
Sbjct: 320 HGQLSQSARLGALGKFRSGSRNILVATDVAARGLDIPAVDLVLNFDLPSDSKTYIHRVGR 379
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAGR+G AIS+V QYE+E + +IE +GK+LPE E+EEV++L +RV +A+R++
Sbjct: 380 TARAGRSGRAISIVTQYEVEIWQRIEVALGKQLPEHKTEKEEVMVLSDRVGDAQRMAVTE 439
Query: 368 IKDSGNKRRRKGG 380
+KD KR KG
Sbjct: 440 MKDLHEKRGTKGA 452
>gi|300175700|emb|CBK21243.2| unnamed protein product [Blastocystis hominis]
Length = 485
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/388 (59%), Positives = 296/388 (76%), Gaps = 10/388 (2%)
Query: 7 DAGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQF 66
D KD+I +A+TGSGKTGAFA+PI+Q L++ QR +A +++PTRELA QISEQF
Sbjct: 90 DQNKDIIAIAETGSGKTGAFAIPIIQRLID--NPQR----MYALIVTPTRELAFQISEQF 143
Query: 67 EALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLV 126
EALGS + L+ AV+VGG+DM+QQ LAL ++PH+VV TPGRL+DHL NTKGFSL T+KYLV
Sbjct: 144 EALGSSVGLKTAVIVGGIDMVQQALALARKPHVVVGTPGRLVDHLENTKGFSLNTMKYLV 203
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
LDEADR L+ DFE+++D+IL+ P+ R TYLFSATMT+KV KLQRA L++PVKI+ +SKY
Sbjct: 204 LDEADRCLSMDFEEAIDKILSCFPKERVTYLFSATMTQKVVKLQRASLQDPVKIQVSSKY 263
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
TV TL QQY F+PAKYK+CYL +I+ E ST++F TC +++LL L LRNLG +A+
Sbjct: 264 QTVSTLIQQYLFIPAKYKECYLAFIMNEFRGKSTILFVSTCSSSQLLTLFLRNLGFKAVC 323
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
I+G++SQ KRLGALNKFK G NILI TDVASRGLDIP VD+V+NYDIP N KDY+HRVG
Sbjct: 324 INGNLSQVKRLGALNKFKEGARNILIATDVASRGLDIPEVDLVVNYDIPGNGKDYVHRVG 383
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQM 366
RTARAG++G AI+ V QY++E Y +IEKLI K+L +P E E L L+ TEA +I+Q
Sbjct: 384 RTARAGKSGRAITFVTQYDVESYQRIEKLIEKRLDAYPCSENEALTYLQTTTEALQIAQR 443
Query: 367 TI----KDSGNKRRRKGGDEDDDIGRQF 390
+ K + R GGD DD + F
Sbjct: 444 EMKEEEKKGKKGKNRDGGDADDYVMDTF 471
>gi|395850554|ref|XP_003797848.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Otolemur
garnettii]
Length = 441
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/400 (59%), Positives = 300/400 (75%), Gaps = 24/400 (6%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 57 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 110
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+D M Q+LAL K+PH+V+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 111 LGSSIGVQCAVIVGGIDSMSQSLALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMD 170
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 171 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 230
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 231 VEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 290
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SK
Sbjct: 291 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSK--------- 341
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
I+ V QY++E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +
Sbjct: 342 -XXXXXXXXITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMEL 400
Query: 369 KDSGNKRRR---KGGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 401 REHGEKKKRTREDTGDNDDTEG-ALGVRNKVAGGKMKKRK 439
>gi|66814184|ref|XP_641271.1| hypothetical protein DDB_G0280147 [Dictyostelium discoideum AX4]
gi|74897202|sp|Q54VT4.1|DDX47_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx47; AltName:
Full=DEAD box protein 47
gi|60469306|gb|EAL67300.1| hypothetical protein DDB_G0280147 [Dictyostelium discoideum AX4]
Length = 546
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/380 (58%), Positives = 287/380 (75%), Gaps = 8/380 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLAQTGSGKT AF +P+LQ LLE + F L+PTRELA QI++QF A
Sbjct: 156 GRDIIGLAQTGSGKTAAFVIPVLQKLLEAPQ------GLFCLALAPTRELAYQIADQFNA 209
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+GS I ++ VLVGG+D M Q+LAL K+PH+VV +PGR++ HL +TKGF+L ++KY ++D
Sbjct: 210 IGSTIGVKTCVLVGGIDSMSQSLALAKKPHVVVGSPGRVLHHLEHTKGFNLRSIKYFIMD 269
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRL + DFE+ ++ IL VIP+ R TYLFSATMT KV KLQRA L NPVK++ ASKY T
Sbjct: 270 EADRLFSADFEEEVNNILKVIPKERNTYLFSATMTSKVAKLQRASLVNPVKVQVASKYQT 329
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTL QQY FVP KYKDCYL YIL E++ + T++FT TC ++ +A+MLRNLG AIPI+
Sbjct: 330 VDTLLQQYLFVPFKYKDCYLAYILNELAGNLTIIFTSTCASSTKIAMMLRNLGFGAIPIN 389
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M Q KRL +LNKFK G +IL+ TDVA+RGLDIPSVD+VINYD+PTNSK+Y+HRVGRT
Sbjct: 390 GDMDQGKRLASLNKFKQGTKSILVATDVAARGLDIPSVDLVINYDVPTNSKEYVHRVGRT 449
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG +G AI++V QY++E Y +IE ++ KKL FP +EE VL+ LERV EA RI+ +
Sbjct: 450 ARAGNSGRAITIVTQYDVEMYQRIEFVLKKKLDSFPCQEETVLIFLERVQEAHRIATNEL 509
Query: 369 KDSG--NKRRRKGGDEDDDI 386
KD + R GD + I
Sbjct: 510 KDKNYSSSSDRHSGDSEGSI 529
>gi|308809810|ref|XP_003082214.1| MGC81303 protein (ISS) [Ostreococcus tauri]
gi|116060682|emb|CAL57160.1| MGC81303 protein (ISS), partial [Ostreococcus tauri]
Length = 382
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/330 (67%), Positives = 273/330 (82%), Gaps = 6/330 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLAQTGSGKTGAFALPILQ+LL+ RT + + +LSPTRELAIQI+EQ EA
Sbjct: 56 GRDVIGLAQTGSGKTGAFALPILQSLLD---EPRT---YHSLILSPTRELAIQIAEQVEA 109
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG GI +R A LVGG++M Q + LGKRPH+VV TPGR++DHL NTKGF L LK LVLD
Sbjct: 110 LGRGIGVRTATLVGGIEMTSQAIMLGKRPHVVVGTPGRVVDHLENTKGFGLKALKVLVLD 169
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLLN DFE+ +D+IL VIP+ R+T LFSATMT KV+KLQRACL++PVK+E ++KYST
Sbjct: 170 EADRLLNLDFEEEIDKILRVIPQDRRTQLFSATMTSKVQKLQRACLRDPVKVEVSAKYST 229
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD+L+Q Y F+PAK+KDCY Y+ E+SAS+ +VF RTCD TR LAL+ RNLG A+PI
Sbjct: 230 VDSLRQHYLFIPAKHKDCYATYLFNELSASTLIVFARTCDQTRKLALIARNLGFGAVPIH 289
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ KR+ AL KFKAGE NILI TDVASRGLDIPSVD+VINYD+P NSKDY+HRVGRT
Sbjct: 290 GQMSQPKRIAALQKFKAGERNILIATDVASRGLDIPSVDVVINYDVPQNSKDYVHRVGRT 349
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGK 338
ARAGR+G+A+++V QY++E Y +IE+LI K
Sbjct: 350 ARAGRSGLAVTMVTQYDVELYQKIERLINK 379
>gi|298711460|emb|CBJ32599.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 848
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 223/363 (61%), Positives = 289/363 (79%), Gaps = 6/363 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPILQALLE QR FA +++PTRELA QI+E EA
Sbjct: 443 GKDVIGLAETGSGKTGAFALPILQALLE--NPQR----LFAVIMAPTRELAFQINEVMEA 496
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG GI L+ +VGG+DM QQ++AL +PH+V+ATPGRL+DHL NTKGFSL T KYLVLD
Sbjct: 497 LGVGIGLKTVCIVGGIDMFQQSVALALKPHVVIATPGRLVDHLENTKGFSLRTAKYLVLD 556
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L DFE+ ++++L+V+PR R+T+LFSATMT KV KLQRA LKNP ++E A+K+ST
Sbjct: 557 EADRMLGMDFEEEINKVLSVLPRERRTFLFSATMTSKVAKLQRASLKNPARVEVANKFST 616
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
TL QQY F+PAK+KDCYL Y+L E + ST+VF TC+ + +AL+LRNLG +A+ +
Sbjct: 617 PKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLH 676
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M Q KRLGAL KFK+G+ N+LI TDVASRGLDIPSVD+V+N +IP++ KDYIHRVGRT
Sbjct: 677 GQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRT 736
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR G +I+ V QY++E Y ++E LIG+KLP + +EE VL+L ERV EA+R++ +
Sbjct: 737 ARAGRAGRSIAFVTQYDVEVYQRMEALIGQKLPPYVCDEETVLVLQERVGEAQRMAAREM 796
Query: 369 KDS 371
+++
Sbjct: 797 REA 799
>gi|388578792|gb|EIM19128.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 438
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/379 (60%), Positives = 287/379 (75%), Gaps = 8/379 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPA-FFACVLSPTRELAIQISEQFE 67
+D+IGLAQTGSGKT AFALP++Q L + PA +F CVL+PTRELA QISEQFE
Sbjct: 41 SRDIIGLAQTGSGKTAAFALPVIQLLYD-------NPAPYFCCVLAPTRELAYQISEQFE 93
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
ALGS I LR A +VGG+DMM Q++AL K+PHI+VATPGRL DHL NTKGFSL +K+LV+
Sbjct: 94 ALGSNIGLRTATIVGGMDMMTQSIALSKKPHIIVATPGRLHDHLENTKGFSLRNIKFLVM 153
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADRLL+ DF +D++L ++P+ R T LFSATMT KV KLQRA L NPVK+E + KY
Sbjct: 154 DEADRLLDMDFGPIIDKLLKILPKERTTMLFSATMTTKVAKLQRASLSNPVKVEVSDKYQ 213
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F P K KD YLVY+ EV+ S ++FTRT + ++++LRNLG AIP+
Sbjct: 214 TVSTLLQHYLFFPFKMKDSYLVYLANEVAGHSMIIFTRTVVDAQRISIILRNLGFPAIPL 273
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGALNKFKAG NIL+ TDVASRGLDIPSVD V+NYD P+NSKDYIHRVGR
Sbjct: 274 HGQLSQSSRLGALNKFKAGGRNILVATDVASRGLDIPSVDYVVNYDTPSNSKDYIHRVGR 333
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAGR+G AI+LV QY++E +IEK I K+ EFP +++ V LL+ERV EA RI+ +
Sbjct: 334 TARAGRSGKAITLVTQYDVELLQRIEKAINVKMEEFPHDKQAVPLLVERVNEASRIAAVE 393
Query: 368 IKDSGNKRRRKGGDEDDDI 386
+++S K+R+ DD+
Sbjct: 394 LRESQQKKRKGKHSSRDDM 412
>gi|308502005|ref|XP_003113187.1| hypothetical protein CRE_25313 [Caenorhabditis remanei]
gi|308265488|gb|EFP09441.1| hypothetical protein CRE_25313 [Caenorhabditis remanei]
Length = 506
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/400 (57%), Positives = 300/400 (75%), Gaps = 26/400 (6%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFA+P+LQ+LL+ + AFF VL+PTRELA QI +QFEA
Sbjct: 91 GKDVIGLAETGSGKTGAFAIPVLQSLLDHPQ------AFFCLVLTPTRELAFQIGQQFEA 144
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI L AV+VGGVDM Q +AL +RPHI+VATPGRL+DHL NTKGF+L LK+L++D
Sbjct: 145 LGSGIGLIAAVIVGGVDMAAQAMALARRPHIIVATPGRLVDHLENTKGFNLKALKFLIMD 204
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE LD+IL VIP+ R+TYLFSATMTKKV KL+RA L++P ++ +++Y T
Sbjct: 205 EADRILNMDFEVELDKILKVIPKERRTYLFSATMTKKVSKLERASLRDPARVSVSTRYKT 264
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD LKQ Y F+P KYK+ YLVY+L E + +S +VF TC +A+MLR LG +A+P+
Sbjct: 265 VDNLKQHYIFIPNKYKETYLVYLLNEHAGNSAIVFCATCATAMQIAVMLRQLGMQAVPLH 324
Query: 249 GHMSQ------------SKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPT 296
G MSQ KRLG+LNKFK+ +IL+CTDVA+RGLDIP VDMVINYD+P+
Sbjct: 325 GQMSQVRFERPLQVGSLEKRLGSLNKFKSKARDILVCTDVAARGLDIPHVDMVINYDMPS 384
Query: 297 NSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLER 356
SKDY+HRVGRTARAGR+G+AI++V QY++E Y +IE +GKKL E+ E EV++L+ER
Sbjct: 385 QSKDYVHRVGRTARAGRSGLAITVVTQYDVEGYQKIEANLGKKLDEYKCVENEVMVLVER 444
Query: 357 VTEAKRISQMTIKD------SGNKRRRKG--GDEDDDIGR 388
EA +++ +K+ SG KRR+ GD +++ GR
Sbjct: 445 TQEALENAKVEMKEMDEKRKSGKKRRQNDDLGDTEENSGR 484
>gi|56202232|dbj|BAD73664.1| putative DEAD box protein [Oryza sativa Japonica Group]
gi|56202381|dbj|BAD73793.1| putative DEAD box protein [Oryza sativa Japonica Group]
Length = 423
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/386 (61%), Positives = 294/386 (76%), Gaps = 22/386 (5%)
Query: 5 FCDAGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISE 64
F G+D+IG+ QTGSGKT AFALPI+QALLE P FFACVL+PTRELAIQI++
Sbjct: 16 FALQGRDVIGVGQTGSGKTAAFALPIIQALLE----HEHRPCFFACVLAPTRELAIQIAK 71
Query: 65 QFEALGSGISLRCAV-------------LVGGVDMMQQTLALGKRPHIVVATPGRLMDHL 111
QFEALGS ISL+C+V L G D Q L K + V TPGRL+DHL
Sbjct: 72 QFEALGSAISLQCSVVWWRSSRACLPEHLRKGFDSWQ----LWKERNSRVGTPGRLLDHL 127
Query: 112 TNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQR 171
TNTKGFS LKYLVLDEAD LL DF+K++D+ILNVIP+ R+T+LFSATMT+KVKKL+R
Sbjct: 128 TNTKGFSFNKLKYLVLDEADDLLKVDFQKAVDDILNVIPKERRTFLFSATMTEKVKKLRR 187
Query: 172 ACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATR 231
ACLKNPVK+E ASKYS VDTL+Q VPAKYKDCYL+++L ++ S MVF RTC++TR
Sbjct: 188 ACLKNPVKVEVASKYSLVDTLRQDLYVVPAKYKDCYLIHVLNKMPGSMIMVFVRTCESTR 247
Query: 232 LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVIN 291
LLALMLRNL +AI ISG MSQ KRLGALN+F+ +CNIL+CTDVASRGLDI VD+VIN
Sbjct: 248 LLALMLRNLRFKAISISGQMSQDKRLGALNRFRTRDCNILVCTDVASRGLDIQGVDVVIN 307
Query: 292 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLI-GKKLPEFPAEEEEV 350
YD P NSKDYIHRVGRTARAG++G A+SLVNQ+E E++ E+ + G+++P + +E+
Sbjct: 308 YDFPLNSKDYIHRVGRTARAGQSGYAVSLVNQFEGEFFKLTEQFLGGEEIPARKVDADEI 367
Query: 351 LLLLERVTEAKRISQMTIKDSGNKRR 376
++L ER+ ++KRI+ T+ +SG +R
Sbjct: 368 MILHERIYDSKRIALKTMNESGYHKR 393
>gi|313228985|emb|CBY18137.1| unnamed protein product [Oikopleura dioica]
Length = 451
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/392 (58%), Positives = 291/392 (74%), Gaps = 9/392 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFAC-VLSPTRELAIQISEQFE 67
GKD+IGLA+TGSGKT AFA+P+LQ LL+ R +C V++PTRELA QI EQF+
Sbjct: 61 GKDVIGLAETGSGKTAAFAIPVLQTLLKTPGGGR-----LSCLVMTPTRELAFQIREQFQ 115
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
ALGS I L CA +VGG++MM Q LAL K+PH++VATPGRL+DHL T+GF+L LK+L++
Sbjct: 116 ALGSSIGLSCACIVGGIEMMSQQLALAKKPHVIVATPGRLVDHLEKTRGFNLKALKFLIM 175
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+LN DFE +D+IL IPR RQT LFSATMT KVKKLQRA LKNPVKI SKY
Sbjct: 176 DEADRILNLDFEAEVDKILRAIPRERQTMLFSATMTAKVKKLQRAALKNPVKISINSKYK 235
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVD Q+Y F+P +K+CYLV +L E+ SS M+FT TC T L+A +++ LG ++P+
Sbjct: 236 TVDKNIQKYMFIPEAHKECYLVSLLNELQGSSFMIFTSTCAKTSLIARLVKRLGYDSVPL 295
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G MSQ KRLGAL +FK +IL+CTDVASRGLD+P VD VINYD+PTN+KDYIHRVGR
Sbjct: 296 HGQMSQQKRLGALARFKGKSRSILVCTDVASRGLDVPHVDCVINYDVPTNTKDYIHRVGR 355
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAGR G +++ V+QY++E Y +IE IGKKL ++P E++EV+ L ERV EAKRI+
Sbjct: 356 TARAGRAGKSVTFVSQYDVELYQKIEAHIGKKLDQWPCEKDEVMALKERVDEAKRIAVQE 415
Query: 368 IKDSGNKRRRKGG---DEDDDIGRQFGINKKK 396
IK+ KR+ K DE+ I + G K K
Sbjct: 416 IKEEEGKRKSKKKRQFDEEQSIKDRIGKVKHK 447
>gi|315055611|ref|XP_003177180.1| ATP-dependent rRNA helicase RRP3 [Arthroderma gypseum CBS 118893]
gi|311339026|gb|EFQ98228.1| ATP-dependent rRNA helicase RRP3 [Arthroderma gypseum CBS 118893]
Length = 474
Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/373 (60%), Positives = 296/373 (79%), Gaps = 7/373 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DL+GLA+TGSGKT AFALPILQAL+E + +F VL+PTRELA+QISE FEA
Sbjct: 86 GRDLVGLAETGSGKTAAFALPILQALMEKPQ------PYFGLVLAPTRELAVQISESFEA 139
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS IS+RCAV+VGG+DM+ Q+++LGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+D
Sbjct: 140 LGSLISVRCAVIVGGMDMISQSISLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMD 199
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF LD+IL V+PR R+TYLFSAT++ KV+ LQRA L NP+++ +S KY
Sbjct: 200 EADRLLDLDFGPVLDKILKVLPRERRTYLFSATLSSKVESLQRASLSNPLRVSISSNKYQ 259
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P KYKD YLV+IL E +T++FTRT + T+ L+++LR LG AIP+
Sbjct: 260 TVSTLLQSYIFIPHKYKDIYLVHILNEFPGQTTIIFTRTVNETQRLSILLRALGFGAIPL 319
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL KF++G +IL+ TDVA+RGLDIP+VD+V+N+D+P++SK YIHRVGR
Sbjct: 320 HGQLSQSARLGALGKFRSGSRDILVATDVAARGLDIPAVDLVLNFDLPSDSKTYIHRVGR 379
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G AIS+V QYE+E + +IE +GK+LPE E+EEV++L +RV +A+R++
Sbjct: 380 TARAGKSGRAISVVTQYEVEIWQRIEAALGKQLPEHKTEKEEVMVLSDRVGDAQRLAVTE 439
Query: 368 IKDSGNKRRRKGG 380
+KD KR KG
Sbjct: 440 MKDLHEKRGTKGA 452
>gi|213410545|ref|XP_002176042.1| ATP-dependent rRNA helicase rrp3 [Schizosaccharomyces japonicus
yFS275]
gi|212004089|gb|EEB09749.1| ATP-dependent rRNA helicase rrp3 [Schizosaccharomyces japonicus
yFS275]
Length = 461
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/388 (60%), Positives = 300/388 (77%), Gaps = 10/388 (2%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IGLAQTGSGKT AFA+P++QAL E P FF VL+PTRELA QISEQFEAL
Sbjct: 80 QDIIGLAQTGSGKTAAFAIPVIQALWE-----NPCP-FFGVVLAPTRELAYQISEQFEAL 133
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
G + ++ V+VGG+DM+ Q +A+ K+PHI+V TPGRLMDHL NTKGFSL LKYLV+DE
Sbjct: 134 GGAMGVKSVVIVGGMDMVTQAVAISKKPHILVCTPGRLMDHLENTKGFSLRNLKYLVMDE 193
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADRLL+ DF +D+IL VIP+ R+T+LFSATMT KV+KLQRA L NPV+I +SK+STV
Sbjct: 194 ADRLLDMDFGPIIDKILKVIPKERRTFLFSATMTSKVEKLQRASLHNPVRIAVSSKFSTV 253
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
DTL Q+Y F P K+KD YLVYI+ E++ S ++FTRT + T+ +A++LR+LG AIP+ G
Sbjct: 254 DTLLQKYLFFPFKHKDTYLVYIVNEMAGQSMIIFTRTVNDTQRVAILLRSLGFSAIPLHG 313
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+SQS RLGALNKFK+G +IL+ TDVA+RGLDIP VD VINYDIPT+SK YIHRVGRTA
Sbjct: 314 QLSQSSRLGALNKFKSGARSILVATDVAARGLDIPLVDAVINYDIPTDSKAYIHRVGRTA 373
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK 369
RAGR+G +I+LV QY+LE +L+IE I KK+ E+ A +E+VLLL ERV EA+R + + +K
Sbjct: 374 RAGRSGKSIALVTQYDLEPFLRIEAAIQKKMEEYDAPKEDVLLLSERVGEAQREAIIQMK 433
Query: 370 DSGNKR----RRKGGDEDDDIGRQFGIN 393
+ KR R KG + DD+ R+ I+
Sbjct: 434 EIHEKRKMKGRGKGKRKHDDMDREEQID 461
>gi|327307140|ref|XP_003238261.1| ATP-dependent rRNA helicase RRP3 [Trichophyton rubrum CBS 118892]
gi|326458517|gb|EGD83970.1| ATP-dependent rRNA helicase RRP3 [Trichophyton rubrum CBS 118892]
Length = 474
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/373 (60%), Positives = 296/373 (79%), Gaps = 7/373 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DL+GLA+TGSGKT AFALPILQAL+E + +F VL+PTRELA+QISE FEA
Sbjct: 86 GRDLVGLAETGSGKTAAFALPILQALMEKPQ------PYFGLVLAPTRELAVQISEAFEA 139
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS IS+RCAV+VGG+DM+ Q+++LGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+D
Sbjct: 140 LGSLISVRCAVIVGGMDMISQSISLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMD 199
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF LD+IL V+PR R+TYLFSAT++ KV+ LQRA L NP+++ +S KY
Sbjct: 200 EADRLLDLDFGPVLDKILKVLPRERRTYLFSATLSSKVESLQRASLSNPLRVSISSNKYQ 259
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P KYKD YLV+IL E +T++FTRT + T+ L+++LR LG AIP+
Sbjct: 260 TVSTLLQSYIFIPHKYKDIYLVHILNEFPGQTTIIFTRTVNETQRLSILLRALGFGAIPL 319
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL KF++G +IL+ TDVA+RGLDIP+VD+V+N+D+P++SK YIHRVGR
Sbjct: 320 HGQLSQSARLGALGKFRSGSRDILVATDVAARGLDIPAVDLVLNFDLPSDSKTYIHRVGR 379
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G AIS+V QYE+E + +IE +GK+LPE E+EEV++L +RV +A+R++
Sbjct: 380 TARAGKSGRAISVVTQYEVEIWQRIEAALGKQLPEHKTEKEEVMVLSDRVGDAQRLAVTE 439
Query: 368 IKDSGNKRRRKGG 380
+KD KR KG
Sbjct: 440 MKDLHEKRGTKGA 452
>gi|198413641|ref|XP_002129468.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
isoform 1 [Ciona intestinalis]
Length = 449
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 230/389 (59%), Positives = 294/389 (75%), Gaps = 7/389 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLA+TGSGKTGAF +P+LQALLE QR FA VL+PTRELA QI EQF+A
Sbjct: 57 GNDVIGLAETGSGKTGAFCIPVLQALLE--NPQR----LFALVLTPTRELAFQIEEQFKA 110
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ V+VGGVDMM Q + L K+PH+VVATPGRL+DHL TKGF+L ++K+LVLD
Sbjct: 111 LGSAIGIKTCVVVGGVDMMGQQIILAKKPHVVVATPGRLVDHLEKTKGFTLRSIKFLVLD 170
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE LD IL VIPR R+T+LFSATMT KVKKLQRA L PVK +KY T
Sbjct: 171 EADRILNMDFESELDTILKVIPRERRTFLFSATMTGKVKKLQRAALTKPVKCAVNNKYHT 230
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD L Q Y F+P+K KDCYL ++ E++ ++ ++F TC T+ AL+LRNLG A+P+
Sbjct: 231 VDKLFQYYLFLPSKDKDCYLAAVVNELAGNAMIIFCGTCANTQRTALILRNLGISAVPLH 290
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ+KRLGALNKFK+ +IL+ TDVASRGLDIP VD+VIN D+P SKDYIHRVGRT
Sbjct: 291 GQMSQAKRLGALNKFKSATKSILVATDVASRGLDIPHVDVVINMDVPARSKDYIHRVGRT 350
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR G +++ V QY++E Y +IE+LIGKKLPE+ E EV +L ERV EA+R++++ +
Sbjct: 351 ARAGRFGKSVTFVTQYDVELYQRIEELIGKKLPEYEMEHNEVKVLQERVAEAQRLARLEM 410
Query: 369 KDSGNKRRRKGGDEDDDIGRQFGINKKKL 397
K+ G+K+R + +++ Q I K K+
Sbjct: 411 KERGSKKRGAVASDSEELADQ-NIGKHKI 438
>gi|326476440|gb|EGE00450.1| ATP-dependent rRNA helicase RRP3 [Trichophyton tonsurans CBS
112818]
gi|326482119|gb|EGE06129.1| ATP-dependent rRNA helicase RRP3 [Trichophyton equinum CBS 127.97]
Length = 474
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/373 (60%), Positives = 296/373 (79%), Gaps = 7/373 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DL+GLA+TGSGKT AFALPILQAL+E + +F VL+PTRELA+QI+E FEA
Sbjct: 86 GRDLVGLAETGSGKTAAFALPILQALMEKPQ------PYFGLVLAPTRELAVQITEAFEA 139
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS IS+RCAV+VGG+DM+ Q+++LGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+D
Sbjct: 140 LGSLISVRCAVIVGGMDMISQSISLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMD 199
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF LD+IL V+PR R+TYLFSAT++ KV+ LQRA L NP+++ +S KY
Sbjct: 200 EADRLLDLDFGPVLDKILKVLPRERRTYLFSATLSSKVESLQRASLSNPLRVSISSNKYQ 259
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P KYKD YLV+IL E +T++FTRT + T+ L+++LR LG AIP+
Sbjct: 260 TVSTLLQSYIFIPHKYKDIYLVHILNEFPGQTTIIFTRTVNETQRLSILLRALGFGAIPL 319
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL KF++G +IL+ TDVA+RGLDIP+VD+V+N+D+P++SK YIHRVGR
Sbjct: 320 HGQLSQSARLGALGKFRSGSRDILVATDVAARGLDIPAVDLVLNFDLPSDSKTYIHRVGR 379
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G AIS+V QYE+E + +IE +GK+LPE E+EEV++L +RV +A+R++
Sbjct: 380 TARAGKSGRAISVVTQYEVEIWQRIEAALGKQLPEHKTEKEEVMVLSDRVGDAQRLAVTE 439
Query: 368 IKDSGNKRRRKGG 380
+KD KR KG
Sbjct: 440 MKDLHEKRGTKGA 452
>gi|302660698|ref|XP_003022025.1| hypothetical protein TRV_03842 [Trichophyton verrucosum HKI 0517]
gi|291185951|gb|EFE41407.1| hypothetical protein TRV_03842 [Trichophyton verrucosum HKI 0517]
Length = 474
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/372 (60%), Positives = 296/372 (79%), Gaps = 7/372 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DL+GLA+TGSGKT AFALPILQAL+E + +F VL+PTRELA+QI+E FEA
Sbjct: 86 GRDLVGLAETGSGKTAAFALPILQALMEKPQ------PYFGLVLAPTRELAVQITEAFEA 139
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS IS+RCAV+VGG+DM+ Q+++LGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+D
Sbjct: 140 LGSLISVRCAVIVGGMDMISQSISLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMD 199
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF LD+IL V+PR R+TYLFSAT++ KV+ LQRA L NP+++ +S KY
Sbjct: 200 EADRLLDLDFGPVLDKILKVLPRERRTYLFSATLSSKVESLQRASLSNPLRVSISSNKYQ 259
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P KYKD YLV+IL E +T++FTRT + T+ L+++LR LG AIP+
Sbjct: 260 TVSTLLQSYIFIPHKYKDIYLVHILNEFPGQTTIIFTRTVNETQRLSILLRALGFGAIPL 319
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL KF++G +IL+ TDVA+RGLDIP+VD+V+N+D+P++SK YIHRVGR
Sbjct: 320 HGQLSQSARLGALGKFRSGSRDILVATDVAARGLDIPAVDLVLNFDLPSDSKTYIHRVGR 379
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G AIS+V QYE+E + +IE +GK+LPE E+EEV++L +RV +A+R++
Sbjct: 380 TARAGKSGRAISVVTQYEVEIWQRIEAALGKQLPEHKTEKEEVMVLSDRVGDAQRLAVTE 439
Query: 368 IKDSGNKRRRKG 379
+KD KR KG
Sbjct: 440 MKDLHEKRGSKG 451
>gi|302508139|ref|XP_003016030.1| hypothetical protein ARB_05427 [Arthroderma benhamiae CBS 112371]
gi|291179599|gb|EFE35385.1| hypothetical protein ARB_05427 [Arthroderma benhamiae CBS 112371]
Length = 474
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/373 (60%), Positives = 296/373 (79%), Gaps = 7/373 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DL+GLA+TGSGKT AFALPILQAL+E + +F VL+PTRELA+QI+E FEA
Sbjct: 86 GRDLVGLAETGSGKTAAFALPILQALMEKPQ------PYFGLVLAPTRELAVQITEAFEA 139
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS IS+RCAV+VGG+DM+ Q+++LGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+D
Sbjct: 140 LGSLISVRCAVIVGGMDMISQSISLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMD 199
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF LD+IL V+PR R+TYLFSAT++ KV+ LQRA L NP+++ +S KY
Sbjct: 200 EADRLLDLDFGPVLDKILKVLPRERRTYLFSATLSSKVESLQRASLSNPLRVSISSNKYQ 259
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P KYKD YLV+IL E +T++FTRT + T+ L+++LR LG AIP+
Sbjct: 260 TVSTLLQSYIFIPHKYKDIYLVHILNEFPGQTTIIFTRTVNETQRLSILLRALGFGAIPL 319
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL KF++G +IL+ TDVA+RGLDIP+VD+V+N+D+P++SK YIHRVGR
Sbjct: 320 HGQLSQSARLGALGKFRSGSRDILVATDVAARGLDIPAVDLVLNFDLPSDSKTYIHRVGR 379
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G AIS+V QYE+E + +IE +GK+LPE E+EEV++L +RV +A+R++
Sbjct: 380 TARAGKSGRAISVVTQYEVEIWQRIEAALGKQLPEHKTEKEEVMVLSDRVGDAQRLAVTE 439
Query: 368 IKDSGNKRRRKGG 380
+KD KR KG
Sbjct: 440 MKDLHEKRGTKGA 452
>gi|46116372|ref|XP_384204.1| hypothetical protein FG04028.1 [Gibberella zeae PH-1]
gi|91207782|sp|Q4IFI0.1|RRP3_GIBZE RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 486
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/372 (60%), Positives = 293/372 (78%), Gaps = 7/372 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKT AFALP+LQALL+ + F VL+PTRELA QI + FEA
Sbjct: 97 GRDIIGLAETGSGKTAAFALPVLQALLDKPQ------PLFGLVLAPTRELATQIGQAFEA 150
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS ISLRCAV+VGG+DM+ Q +ALGK+PHIVVATPGRL+DHL TKGFSL TLKYL++D
Sbjct: 151 LGSLISLRCAVIVGGLDMVPQAIALGKKPHIVVATPGRLVDHLEKTKGFSLRTLKYLIMD 210
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF S+D+IL +PR R+TYLFSAT++ K++ LQRA L++PVK+ +S KY
Sbjct: 211 EADRLLDMDFGPSIDKILKFVPRERRTYLFSATISSKIESLQRASLRDPVKVSISSNKYQ 270
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P KD +L+Y++ E + ST+VFTRT T+ ++++LR LG AIP+
Sbjct: 271 TVSTLLQNYLFIPHPQKDVHLIYLINEHAGQSTIVFTRTVWETQRVSILLRTLGFGAIPL 330
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGALNKF++G +IL+ TDVA+RGLDIPSVD+V+NYD+P +SK YIHRVGR
Sbjct: 331 HGQLSQSSRLGALNKFRSGTRDILVATDVAARGLDIPSVDVVLNYDLPQDSKTYIHRVGR 390
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++GVAISLV QY+LE YL+IE +GKKL E+P E+EEV+ RV EA+RI+++
Sbjct: 391 TARAGKSGVAISLVTQYDLEIYLRIEAALGKKLAEYPTEKEEVMAFQSRVEEAQRIARIE 450
Query: 368 IKDSGNKRRRKG 379
+K +R +KG
Sbjct: 451 MKSFTEERGKKG 462
>gi|159130845|gb|EDP55958.1| ATP-dependent RNA helicase , putative [Aspergillus fumigatus A1163]
Length = 472
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/388 (58%), Positives = 301/388 (77%), Gaps = 15/388 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQAL+E ++ FF +L+PTRELA QIS+ FE+
Sbjct: 89 GRDLIGLAETGSGKTAAFALPILQALMEKPQS------FFGLILAPTRELAFQISKSFES 142
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I++RCAV+VGG+DM+ Q++ALGK+PHI+VATPGRL+DHL NTKGFSL TLKYLV+D
Sbjct: 143 LGSTINVRCAVIVGGMDMVSQSIALGKKPHIIVATPGRLLDHLENTKGFSLRTLKYLVMD 202
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF LD+IL V+PR R+T+LFSATM+ KV+ LQRA L NP+++ +S KY
Sbjct: 203 EADRLLDMDFGPLLDKILKVLPRERRTFLFSATMSSKVESLQRASLSNPLRVSVSSNKYQ 262
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P K+KD YLVY+L E ST++FTRT T+ ++ +LR+LG AIP+
Sbjct: 263 TVSTLLQSYLFLPHKHKDIYLVYLLNEFVGQSTIIFTRTVHETQRISFLLRSLGFGAIPL 322
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL KF++ +IL+ TDVA+RGLDIPSVD+V+N+D+PT+SK Y+HRVGR
Sbjct: 323 HGQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGR 382
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++GVAIS V QY++E +L+IE +GKKL E+ E++EV++L ERV EA+R + M
Sbjct: 383 TARAGKSGVAISFVTQYDVEIWLRIEGALGKKLKEYELEKDEVMVLAERVGEAQRQAIME 442
Query: 368 IKDSGNKRRRKGGDEDDDIGRQFGINKK 395
+K+ KR K ++FG K+
Sbjct: 443 MKNFDEKRGTK--------AKKFGKGKR 462
>gi|70991044|ref|XP_750371.1| ATP-dependent RNA helicase [Aspergillus fumigatus Af293]
gi|74669652|sp|Q4WJE9.1|RRP3_ASPFU RecName: Full=ATP-dependent rRNA helicase rrp3
gi|66848003|gb|EAL88333.1| ATP-dependent RNA helicase , putative [Aspergillus fumigatus Af293]
Length = 472
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/388 (58%), Positives = 301/388 (77%), Gaps = 15/388 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQAL+E + +FF +L+PTRELA QIS+ FE+
Sbjct: 89 GRDLIGLAETGSGKTAAFALPILQALMENPQ------SFFGLILAPTRELAFQISKSFES 142
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I++RCAV+VGG+DM+ Q++ALGK+PHI+VATPGRL+DHL NTKGFSL TLKYLV+D
Sbjct: 143 LGSTINVRCAVIVGGMDMVSQSIALGKKPHIIVATPGRLLDHLENTKGFSLRTLKYLVMD 202
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF LD+IL V+PR R+T+LFSATM+ KV+ LQRA L NP+++ +S KY
Sbjct: 203 EADRLLDMDFGPLLDKILKVLPRERRTFLFSATMSSKVESLQRASLSNPLRVSVSSNKYQ 262
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P K+KD YLVY+L E ST++FTRT T+ ++ +LR+LG AIP+
Sbjct: 263 TVSTLLQSYLFLPHKHKDIYLVYLLNEFVGQSTIIFTRTVHETQRISFLLRSLGFGAIPL 322
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL KF++ +IL+ TDVA+RGLDIPSVD+V+N+D+PT+SK Y+HRVGR
Sbjct: 323 HGQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGR 382
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++GVAIS V QY++E +L+IE +GKKL E+ E++EV++L ERV EA+R + M
Sbjct: 383 TARAGKSGVAISFVTQYDVEIWLRIEGALGKKLKEYELEKDEVMVLAERVGEAQRQAIME 442
Query: 368 IKDSGNKRRRKGGDEDDDIGRQFGINKK 395
+K+ KR K ++FG K+
Sbjct: 443 MKNFDEKRGTK--------AKKFGKGKR 462
>gi|302690998|ref|XP_003035178.1| hypothetical protein SCHCODRAFT_14350 [Schizophyllum commune H4-8]
gi|300108874|gb|EFJ00276.1| hypothetical protein SCHCODRAFT_14350 [Schizophyllum commune H4-8]
Length = 449
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/379 (60%), Positives = 290/379 (76%), Gaps = 11/379 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+A TGSGKT AFALPILQ L + + FACVL+PTRELA QIS+QFEA
Sbjct: 51 GRDIIGVASTGSGKTAAFALPILQKLWDDPKG------LFACVLAPTRELAYQISQQFEA 104
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +RCAV+VGG D+M Q +AL KRPHIVVATPGRL DHL TKGF+L +K+LVLD
Sbjct: 105 LGSAMGVRCAVIVGGTDIMAQKVALAKRPHIVVATPGRLDDHLEKTKGFNLRGIKFLVLD 164
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +D+IL VIP+ R TYLFSATMT KV KLQRA L NPV++E +KY T
Sbjct: 165 EADRLLDMDFGPVIDKILKVIPKERTTYLFSATMTTKVAKLQRASLSNPVRVEVNTKYQT 224
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD+L Q Y +P K KD LVY+ ++ +S ++FTRT + L+++LR LG A+P+
Sbjct: 225 VDSLLQYYLLMPLKEKDTLLVYLANTLAQNSIIIFTRTVNDAARLSIILRTLGFPAVPLH 284
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS+RLGAL+KFK+G +L+ TDVASRGLDIPSVD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 285 GQLSQSQRLGALSKFKSGGRKVLVATDVASRGLDIPSVDIVINFDIPTHSKDYIHRVGRT 344
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR G +I+ V QY++E+ ++IEK+IGKK+ +P +EEEV LL ERV EA R++ +
Sbjct: 345 ARAGRAGKSITFVTQYDVEFIMRIEKVIGKKMELWPTDEEEVSLLRERVGEAARVAAAEM 404
Query: 369 KDS-----GNKRRRKGGDE 382
+D G K+RR+GGDE
Sbjct: 405 RDQAKAGHGGKKRRRGGDE 423
>gi|330794252|ref|XP_003285194.1| hypothetical protein DICPUDRAFT_7134 [Dictyostelium purpureum]
gi|325084915|gb|EGC38333.1| hypothetical protein DICPUDRAFT_7134 [Dictyostelium purpureum]
Length = 434
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/380 (58%), Positives = 290/380 (76%), Gaps = 7/380 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLAQTGSGKTGAF +P+LQ LLE + F ++PTRELA QI+EQF A
Sbjct: 47 GRDIIGLAQTGSGKTGAFVIPVLQKLLEQPQ------GIFCLCIAPTRELAFQIAEQFNA 100
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ I ++ VLVGG+D M Q+L L K+PHI++ +PGR++ HL NTKGF+L ++KY ++D
Sbjct: 101 LGATIGVKTCVLVGGIDSMTQSLQLAKKPHIIIGSPGRIIFHLENTKGFNLRSIKYFIMD 160
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRL DFE+ ++ IL VIP+ R T+LFSATMT KV KLQRA L NPVKI+ A+KY T
Sbjct: 161 EADRLFGADFEEEVNNILKVIPKERNTFLFSATMTSKVAKLQRASLVNPVKIQVATKYQT 220
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTL QQY F+P KYK+CYLVYIL E++ + T++FT TC ++ + LMLRNLG AIPI+
Sbjct: 221 VDTLIQQYLFIPFKYKECYLVYILNELAGNLTIIFTSTCASSNKVTLMLRNLGLAAIPIN 280
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M Q+KRL +L+KFK G +IL+ TDVA+RGLDIP VD+VINYD+PTNSK+YIHRVGRT
Sbjct: 281 GDMDQAKRLASLSKFKQGTKSILVATDVAARGLDIPMVDLVINYDVPTNSKEYIHRVGRT 340
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG +G AI+LV QY++E Y +IE ++ KKL EFP +E+ VL+ LERVT+A R + +
Sbjct: 341 ARAGNSGRAITLVTQYDVEMYQRIEFVLKKKLDEFPCQEDTVLIFLERVTQAVREATNKL 400
Query: 369 KDSG-NKRRRKGGDEDDDIG 387
KDSG + + GD + IG
Sbjct: 401 KDSGYSSGDKSSGDAEGSIG 420
>gi|408395320|gb|EKJ74502.1| hypothetical protein FPSE_05252 [Fusarium pseudograminearum CS3096]
Length = 487
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/372 (59%), Positives = 294/372 (79%), Gaps = 7/372 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKT AFALP+LQALL+ + F VL+PTRELA QI + FEA
Sbjct: 97 GRDIIGLAETGSGKTAAFALPVLQALLDKPQ------PLFGLVLAPTRELATQIGQAFEA 150
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS ISLRCAV+VGG+DM+ Q++ALGK+PHI+VATPGRL+DHL TKGFSL TLKYL++D
Sbjct: 151 LGSLISLRCAVIVGGLDMVPQSIALGKKPHIIVATPGRLVDHLEKTKGFSLRTLKYLIMD 210
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF S+D+IL +PR R+TYLFSAT++ K++ LQRA L++PVK+ +S KY
Sbjct: 211 EADRLLDMDFGPSIDKILKFVPRERRTYLFSATISSKIESLQRASLRDPVKVSISSNKYQ 270
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P KD +L+Y++ E + ST+VFTRT T+ ++++LR LG AIP+
Sbjct: 271 TVSTLLQHYLFIPHPQKDVHLIYLINEHAGQSTIVFTRTVWETQRVSILLRTLGFGAIPL 330
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGALNKF++G +IL+ TDVA+RGLDIPSVD+V+NYD+P +SK Y+HRVGR
Sbjct: 331 HGQLSQSSRLGALNKFRSGTRDILVATDVAARGLDIPSVDVVLNYDLPQDSKTYVHRVGR 390
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++GVAISLV QY+LE YL+IE +GKKL E+P E+EEV+ RV EA+R++++
Sbjct: 391 TARAGKSGVAISLVTQYDLEIYLRIEAALGKKLGEYPTEKEEVMAFQSRVEEAQRVARIE 450
Query: 368 IKDSGNKRRRKG 379
+K +R +KG
Sbjct: 451 MKSFTEERGKKG 462
>gi|296425145|ref|XP_002842103.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638362|emb|CAZ86294.1| unnamed protein product [Tuber melanosporum]
Length = 513
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/377 (61%), Positives = 293/377 (77%), Gaps = 14/377 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDLIGLA+TGSGKT AFA+PILQAL + FAC+L+PTRELA QISEQFEA
Sbjct: 119 GKDLIGLAETGSGKTAAFAIPILQALWD------NPTGLFACILAPTRELAFQISEQFEA 172
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG GI +R AV+VGG+DMM Q++ALGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+D
Sbjct: 173 LGGGIGVRSAVIVGGMDMMTQSVALGKKPHILVATPGRLLDHLENTKGFSLRNLKYLVMD 232
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF LD+IL VIP+ R+TYLFSATMT KV+KLQRA L +PV+I SKYST
Sbjct: 233 EADRLLDMDFGPILDKILKVIPQTRRTYLFSATMTSKVEKLQRASLSSPVRISVGSKYST 292
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q++ F+P K+KD YLVY++ E + +T++F RT T LA++LR+LG A+P++
Sbjct: 293 VSTLIQKFLFIPFKHKDTYLVYLMNEFAGQTTIIFCRTVQETSRLAILLRHLGFNAVPLN 352
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIP-SVDM----VINYDIPTNSKDYIH 303
G MSQS RLGALNKFK+G NIL+ TDVA+RGLD+ S D V+N+D+ +SK YIH
Sbjct: 353 GQMSQSARLGALNKFKSGSRNILVATDVAARGLDMHVSPDALLYCVLNHDLAQDSKTYIH 412
Query: 304 RVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRI 363
RVGRTARAGR+G +ISLV QYE+E +L+IE +GKK+PEF +EE+VL+ ERV EA+R
Sbjct: 413 RVGRTARAGRSGRSISLVTQYEVELFLRIEAALGKKIPEFDVQEEDVLIFSERVGEAQRE 472
Query: 364 SQMTIKDSGNKRRRKGG 380
+ +++ +R +KGG
Sbjct: 473 AAKQLRE---EREKKGG 486
>gi|328853252|gb|EGG02392.1| hypothetical protein MELLADRAFT_75483 [Melampsora larici-populina
98AG31]
Length = 486
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/377 (61%), Positives = 294/377 (77%), Gaps = 11/377 (2%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
KD+IGLAQTGSGKT AFALP+LQ+L + + AFFACVL+PTRELA QIS+QF+AL
Sbjct: 97 KDIIGLAQTGSGKTAAFALPVLQSLWD------SPSAFFACVLAPTRELAYQISQQFDAL 150
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GS I ++ V+VGG+DMM Q +AL KRPH++VATPGRL DHL +TKGFSL L++L++DE
Sbjct: 151 GSTIGVKTVVIVGGMDMMSQAIALSKRPHVIVATPGRLHDHLEHTKGFSLRNLQFLIMDE 210
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADRLL+ DF +D+IL VIP+ R+TYLFSATMT KV KLQRA L NPVK+E ++KY TV
Sbjct: 211 ADRLLDMDFGPVIDKILKVIPKERKTYLFSATMTTKVAKLQRASLNNPVKVEVSAKYDTV 270
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
L Q Y F+P K+KD YLVY+ E+S S +VFTRT L+L+LR LG A+P+ G
Sbjct: 271 SALVQTYLFLPFKHKDTYLVYLANELSGKSLIVFTRTVHDASRLSLILRTLGFPAVPLHG 330
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+SQS RLGALNKFK+G+ ++L+ TDVASRGLDIP+VD VIN+D+PTNSKDYIHRVGRTA
Sbjct: 331 QLSQSARLGALNKFKSGDQSLLVATDVASRGLDIPAVDCVINFDLPTNSKDYIHRVGRTA 390
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR--ISQM- 366
RAGR+G +I+LV QY++E +IE +IGKK+ EF ++E+V++L ERV EA R +M
Sbjct: 391 RAGRSGKSITLVTQYDVELLQRIEGVIGKKMNEFEHQKEQVMVLGERVGEAAREVAREMR 450
Query: 367 TIKDSGNK--RRRKGGD 381
I+ +GNK R+RK G+
Sbjct: 451 EIERNGNKFNRKRKSGE 467
>gi|307214659|gb|EFN89598.1| Probable ATP-dependent RNA helicase DDX47 [Harpegnathos saltator]
Length = 377
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/383 (60%), Positives = 293/383 (76%), Gaps = 17/383 (4%)
Query: 30 ILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 89
+LQALLE QR +FA VL+PTRELA QISEQFEALGS I ++CAVLVGG+DM Q
Sbjct: 1 MLQALLE--NPQR----YFALVLTPTRELAFQISEQFEALGSSIGVKCAVLVGGMDMSAQ 54
Query: 90 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 149
L L K+PHI++ TPGRL+D+L NTKGFSL LK+LV+ EADR+LN DFE +D+IL VI
Sbjct: 55 ALLLSKKPHIIITTPGRLVDYLENTKGFSLQNLKFLVMGEADRILNMDFEIEVDKILRVI 114
Query: 150 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 209
PR R+T LFSATMTKKV+KLQRA L+NPVK+E ++KY TV+ L+Q Y F+P K+KD YLV
Sbjct: 115 PRERRTLLFSATMTKKVQKLQRASLRNPVKVEVSTKYQTVEKLQQYYIFIPVKFKDVYLV 174
Query: 210 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 269
+IL E++ +S M+F TC+ T AL+LRNLG A+P+ G MSQ+KR+ AL KFKA +
Sbjct: 175 HILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPLHGQMSQNKRIAALTKFKARNRS 234
Query: 270 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 329
ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G +I+ V QY++E Y
Sbjct: 235 ILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSITFVTQYDVELY 294
Query: 330 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD-----SGNKRRRKGGDEDD 384
+IE+LI K+LP +P EE EV+LL ERVTEA+RI +M +KD KR+++ GD +D
Sbjct: 295 QRIEQLISKQLPLWPTEEGEVMLLQERVTEAQRIVKMEVKDIEENKKLGKRKKRAGDNED 354
Query: 385 DIGRQFGI------NKKKLSKRK 401
D + G+ N KK+ KR+
Sbjct: 355 DTEQSIGVRKRIKGNGKKMGKRR 377
>gi|121702529|ref|XP_001269529.1| ATP-dependent RNA helicase , putative [Aspergillus clavatus NRRL 1]
gi|143462228|sp|A1CR32.1|RRP3_ASPCL RecName: Full=ATP-dependent rRNA helicase rrp3
gi|119397672|gb|EAW08103.1| ATP-dependent RNA helicase , putative [Aspergillus clavatus NRRL 1]
Length = 473
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/367 (60%), Positives = 292/367 (79%), Gaps = 7/367 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+DLIGLA+TGSGKT AFALPILQAL++ ++ FF VL+PTRELA QIS+ FEAL
Sbjct: 91 RDLIGLAETGSGKTAAFALPILQALMDKPQS------FFGLVLAPTRELAFQISQSFEAL 144
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GS I++RCAV+VGG+DM+ Q++ALGK+PHI+VATPGRL+DHL NTKGFSL TLKYLV+DE
Sbjct: 145 GSTINVRCAVIVGGMDMVSQSIALGKKPHIIVATPGRLLDHLENTKGFSLRTLKYLVMDE 204
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYST 188
ADRLL+ DF LD+IL ++PR R+T+LFSATM+ KV+ LQRA L NP+++ +S KY T
Sbjct: 205 ADRLLDMDFGPLLDKILKILPRERRTFLFSATMSSKVESLQRASLSNPLRVSVSSNKYQT 264
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q YRF+P K+KD YLVY+L E S ++FTRT T+ ++ +LR LG AIP+
Sbjct: 265 VSTLLQSYRFIPHKHKDIYLVYLLNEFVGQSAIIFTRTVHETQRISFLLRALGFGAIPLH 324
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS RLGAL KF++ +IL+ TDVA+RGLDIPSVD+V+N+D+PT+SK Y+HRVGRT
Sbjct: 325 GQLSQSSRLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGRT 384
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG++GVAIS V QY++E +L+IE +GKKL E+ E++EV++L ERV EA+R + M +
Sbjct: 385 ARAGKSGVAISFVTQYDVEIWLRIEGALGKKLDEYDLEKDEVMVLAERVGEAQRQAIMEM 444
Query: 369 KDSGNKR 375
K+ K+
Sbjct: 445 KNFDEKK 451
>gi|392566869|gb|EIW60044.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 420
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/407 (57%), Positives = 301/407 (73%), Gaps = 21/407 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+A TGSGKT AFALPILQ L E + FACVL+PTRELA+QI++QFE+
Sbjct: 20 GRDIIGVASTGSGKTAAFALPILQKLWEEPKG------LFACVLAPTRELAVQIAQQFES 73
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+GS + +RCA ++GGVD+M Q +AL K+PHIVVATPGRL DHL TKGFSL +L++LVLD
Sbjct: 74 IGSAMGVRCATIIGGVDIMAQKVALAKKPHIVVATPGRLNDHLEETKGFSLRSLQFLVLD 133
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +D+IL VIP+ R TYLFSATMT KV KLQRA L NPV+IE SKYST
Sbjct: 134 EADRLLDMDFGPIIDKILKVIPKERTTYLFSATMTTKVAKLQRASLSNPVRIEVNSKYST 193
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y +P KD +L+Y+ ++ +S ++FTRT + L+++LR LG AIP+
Sbjct: 194 VSTLLQYYLLIPLPQKDVHLIYLANTLAQNSIIIFTRTVHDAQRLSIILRTLGFPAIPLH 253
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS RLGAL KFK+G +L+ TDVASRGLDIPSVD+VINYDIPT+SKDYIHRVGRT
Sbjct: 254 GQLSQSARLGALGKFKSGGRKVLVATDVASRGLDIPSVDVVINYDIPTHSKDYIHRVGRT 313
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +++LV QY++E L+IE++IGKK+ +P ++EEV LL ERV EA R++ +
Sbjct: 314 ARAGRSGKSVTLVTQYDVELVLRIEQVIGKKMELWPVDKEEVALLRERVDEAGRLATSEM 373
Query: 369 KD----SGNKRRRKGG--------DEDDDI---GRQFGINKKKLSKR 400
++ G+K+R++GG D DDD+ G K K S+R
Sbjct: 374 REQGIRGGHKKRKRGGEDGGKGDMDRDDDVHEAGMPMHKKKGKSSRR 420
>gi|403347814|gb|EJY73340.1| hypothetical protein OXYTRI_05530 [Oxytricha trifallax]
Length = 508
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/374 (58%), Positives = 285/374 (76%), Gaps = 7/374 (1%)
Query: 3 LWFCDAGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQI 62
L + GKD+IGLA+TGSGKT AFA+P++Q LL+ + FFACV+SPTREL +QI
Sbjct: 90 LQYTLKGKDIIGLAETGSGKTAAFAIPVIQQLLDNPQ------PFFACVMSPTRELCVQI 143
Query: 63 SEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL 122
+EQFEA+G+GI LR AVLVGG+DM+ Q +AL K PH+V+ TPGR+ DHL NTKGF L L
Sbjct: 144 AEQFEAIGAGIGLRTAVLVGGLDMVSQAIALSKNPHVVIGTPGRMADHLANTKGFHLKKL 203
Query: 123 KYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEA 182
K+L+ DEADRLL+ DFEK ++ IL IP+ R TYLFSATMT KV+KLQRA L +PVKIE
Sbjct: 204 KFLIFDEADRLLSMDFEKQINLILTQIPKSRNTYLFSATMTSKVQKLQRASLNDPVKIEV 263
Query: 183 ASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQ 242
+SKY TVDTL Q Y F+P K+K+ YLVY+LT+ + ++FT TC+ + LAL+LRNL
Sbjct: 264 SSKYKTVDTLVQNYIFIPEKHKETYLVYLLTQFAGQKMIIFTTTCNQSMKLALILRNLNF 323
Query: 243 RAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYI 302
+A+ I+G ++Q++RL ALNKFKA E NILI TDVASRGLDIP VD VIN+DIP +SKDY+
Sbjct: 324 KAVNINGQLTQTQRLSALNKFKANERNILIATDVASRGLDIPEVDFVINFDIPQHSKDYV 383
Query: 303 HRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA-EEEEVLLLLERVTEAK 361
HRVGRTARAG+TG AI+ V QY++E + +IE+LI KKL E+P + + L+L + V EA
Sbjct: 384 HRVGRTARAGKTGKAITFVTQYDVETFQKIEQLIDKKLDEYPGLDSKAALILTDSVVEAT 443
Query: 362 RISQMTIKDSGNKR 375
R++ +K+ K
Sbjct: 444 RLAVFEMKNREGKH 457
>gi|50543676|ref|XP_500004.1| YALI0A12133p [Yarrowia lipolytica]
gi|74660195|sp|Q6CH58.1|RRP3_YARLI RecName: Full=ATP-dependent rRNA helicase RRP3
gi|49645869|emb|CAG83933.1| YALI0A12133p [Yarrowia lipolytica CLIB122]
Length = 480
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/386 (59%), Positives = 293/386 (75%), Gaps = 11/386 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLAQTGSGKT AFA+P+LQ+L E + + VL+PTRELA QISE FEA
Sbjct: 101 GRDIIGLAQTGSGKTAAFAIPVLQSLYENPQ------PLYCVVLAPTRELAYQISETFEA 154
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + LR AV+VGG++MM Q +AL K+PH++VATPGRL+DHL NTKGFSL TLK+LV+D
Sbjct: 155 LGSAMGLRTAVVVGGMNMMTQAVALSKKPHVIVATPGRLVDHLENTKGFSLRTLKFLVMD 214
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ +F SLD+IL VIPR R TYLFSATMT KV+KLQRA L +PV++ ++KY T
Sbjct: 215 EADRLLDMEFGPSLDKILKVIPRQRNTYLFSATMTSKVEKLQRASLVDPVRVAVSTKYQT 274
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
D L Q F P K+KD +LVY+++E + +S ++F RT T+ ++L+LRNLG AIP+
Sbjct: 275 ADNLLQYMVFCPFKHKDTHLVYLVSENAGNSMIIFARTKSDTQRISLLLRNLGYGAIPLH 334
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQ+ RLGALNKFK+G NILI TDVASRGLDIP+VD+VINYDIP++SK YIHRVGRT
Sbjct: 335 GDLSQTARLGALNKFKSGSRNILIATDVASRGLDIPAVDLVINYDIPSDSKSYIHRVGRT 394
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR--ISQM 366
ARAGR G +++LV+QY+LE YL+IE +GKKL +P E E V+L ERV EA R I +M
Sbjct: 395 ARAGRAGKSVALVSQYDLELYLRIEGALGKKLDSYPLESEAVMLFSERVAEASRAAIQEM 454
Query: 367 TIKDSGNKRR---RKGGDEDDDIGRQ 389
+D KR +K ++ DIG Q
Sbjct: 455 KGEDGTKKRSKFDKKRRRDEMDIGEQ 480
>gi|119496543|ref|XP_001265045.1| ATP-dependent RNA helicase , putative [Neosartorya fischeri NRRL
181]
gi|143462290|sp|A1D405.1|RRP3_NEOFI RecName: Full=ATP-dependent rRNA helicase rrp3
gi|119413207|gb|EAW23148.1| ATP-dependent RNA helicase , putative [Neosartorya fischeri NRRL
181]
Length = 472
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/388 (58%), Positives = 300/388 (77%), Gaps = 15/388 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQAL+E ++ FF +L+PTRELA QIS+ FE+
Sbjct: 89 GRDLIGLAETGSGKTAAFALPILQALMEKPQS------FFGLILAPTRELAFQISKSFES 142
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I++RCAV+VGG+DM+ Q++ALGK+PHI+VATPGRL+DHL NTKGFSL TLKYLV+D
Sbjct: 143 LGSTINVRCAVIVGGMDMVSQSIALGKKPHIIVATPGRLLDHLENTKGFSLRTLKYLVMD 202
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF LD+IL V+PR R+T+LFSATM+ KV+ LQRA L NP+++ +S KY
Sbjct: 203 EADRLLDMDFGPLLDKILKVLPRERRTFLFSATMSSKVESLQRASLSNPLRVSVSSNKYQ 262
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P K+KD YLVY+L E S ++FTRT T+ ++ +LR+LG AIP+
Sbjct: 263 TVSTLLQSYLFLPHKHKDIYLVYLLNEFVGQSAIIFTRTVHETQRISFLLRSLGFGAIPL 322
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL KF++ +IL+ TDVA+RGLDIPSVD+V+N+D+PT+SK Y+HRVGR
Sbjct: 323 HGQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGR 382
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++GVAIS V QY++E +L+IE +GKKL E+ E++EV++L ERV EA+R + +
Sbjct: 383 TARAGKSGVAISFVTQYDVEIWLRIEGALGKKLKEYELEKDEVMVLAERVGEAQRQAIVE 442
Query: 368 IKDSGNKRRRKGGDEDDDIGRQFGINKK 395
+K+ KR K ++FG K+
Sbjct: 443 MKNFDEKRGTK--------AKKFGKGKR 462
>gi|453082962|gb|EMF11008.1| ATP-dependent rRNA helicase RRP3 [Mycosphaerella populorum SO2202]
Length = 516
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/373 (59%), Positives = 290/373 (77%), Gaps = 7/373 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKT AFALPILQALLE ++ +F VL+PTRELA QIS+QFEA
Sbjct: 125 GKDVIGLAETGSGKTAAFALPILQALLEKQDH------YFGLVLAPTRELAYQISQQFEA 178
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I+++CAV+VGG+DM Q +AL K+PHI+VATPGRLMDHL NTKGFSL LKYLV+D
Sbjct: 179 LGSLINVKCAVIVGGMDMTPQQIALAKKPHIIVATPGRLMDHLENTKGFSLRKLKYLVMD 238
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYS 187
EADRLL+ DF LD+IL V+PR R+T LFSATM+ K+ L RA L++PV++ ++S Y
Sbjct: 239 EADRLLDLDFGPILDKILQVLPRERRTMLFSATMSTKLDNLTRAALQSPVRVSISSSSYQ 298
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV LKQ Y F+P K+KD YLVY++ E + + ++FTRT + T +A +LR LG+ AIP+
Sbjct: 299 TVKNLKQSYIFIPHKFKDIYLVYLVNEFAGQTCIIFTRTINETARIAFLLRALGRSAIPL 358
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++QS RLGALNKF+ G +IL+ TDVA+RGLDIPSVD+V+NYD+P +SK Y+HRVGR
Sbjct: 359 HGQLNQSARLGALNKFRGGSRDILVATDVAARGLDIPSVDLVLNYDLPPDSKTYVHRVGR 418
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG+ GVAIS+V QY++E Y +IEK +GKKL EF E++EV++ +RV EA+R++
Sbjct: 419 TARAGKAGVAISIVTQYDVEVYQRIEKALGKKLAEFGTEKDEVMVFAQRVQEAQRVAVQE 478
Query: 368 IKDSGNKRRRKGG 380
+K+ KR K G
Sbjct: 479 MKNEHEKRGNKKG 491
>gi|169854086|ref|XP_001833720.1| ATP-dependent rRNA helicase RRP3 [Coprinopsis cinerea okayama7#130]
gi|116505187|gb|EAU88082.1| ATP-dependent rRNA helicase RRP3 [Coprinopsis cinerea okayama7#130]
Length = 455
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/362 (62%), Positives = 282/362 (77%), Gaps = 6/362 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+A+TGSGKT AFALPILQ L E + FACVL+PTRELA QIS+QFEA
Sbjct: 56 GRDIIGVAETGSGKTAAFALPILQKLWEEPKG------LFACVLAPTRELAYQISQQFEA 109
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ + RCAV+VGG+D+ Q +AL KRPH+VVATPGRL+ HL TKGFSL TLK+LVLD
Sbjct: 110 LGAAMGARCAVIVGGMDLPTQAIALAKRPHVVVATPGRLLQHLEETKGFSLRTLKFLVLD 169
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF ++D+IL +IP+ R TYLFSATMT KV KLQRA L NPV++E + KY T
Sbjct: 170 EADRLLDMDFGPAIDKILKLIPKERTTYLFSATMTSKVAKLQRASLVNPVRVEVSGKYQT 229
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y VP K K L+Y+ ++ +S ++FTRT RLL+++LR LG A+P+
Sbjct: 230 VSTLLQHYLLVPLKDKVVMLIYLANSLAQNSIIIFTRTVRDARLLSIILRTLGFPAVPLH 289
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS+RLGAL KFK+G IL+ TDVASRGLDIPSVD+VINYDIPT+SKDYIHRVGRT
Sbjct: 290 GQLSQSQRLGALGKFKSGGRKILVATDVASRGLDIPSVDVVINYDIPTHSKDYIHRVGRT 349
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR G AI+LV QY++E +IEK+IGKK+ +P ++EEVLLL ERV+EA+R++ I
Sbjct: 350 ARAGRAGKAITLVTQYDVELLQRIEKVIGKKMDAWPTDDEEVLLLKERVSEAERLAVNEI 409
Query: 369 KD 370
KD
Sbjct: 410 KD 411
>gi|154284444|ref|XP_001543017.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus NAm1]
gi|160358658|sp|A6QRQ7.1|RRP3_AJECN RecName: Full=ATP-dependent rRNA helicase RRP3
gi|150406658|gb|EDN02199.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus NAm1]
Length = 485
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/373 (60%), Positives = 293/373 (78%), Gaps = 7/373 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQAL+ ++ F +L+PTRELA QISE FEA
Sbjct: 96 GRDLIGLAETGSGKTAAFALPILQALMNKPQS------LFGLILAPTRELACQISEAFEA 149
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS IS+RCAV+VGG+DM+ Q ++LGK+PHI+VATPGRL+DHL NTKGFSL +LKYLV+D
Sbjct: 150 LGSLISVRCAVIVGGMDMVSQAISLGKKPHIIVATPGRLLDHLENTKGFSLRSLKYLVMD 209
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF LD+IL V+PR R+TYLFSATM+ KV+ LQRA L NP+++ +S KY
Sbjct: 210 EADRLLDLDFGPILDKILKVLPRERRTYLFSATMSSKVESLQRASLSNPLRVSISSNKYQ 269
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P KYKD YLVY+L E + S +VFTRT + T+ LA++LR LG +IP+
Sbjct: 270 TVATLLQSYLFIPHKYKDIYLVYLLNEYAGQSAIVFTRTVNETQRLAILLRALGFGSIPL 329
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL+KF++ +IL+ TDVA+RGLDIPSVD+V+N+D+P++SK YIHRVGR
Sbjct: 330 HGQLSQSSRLGALSKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPSDSKTYIHRVGR 389
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G A S+V QY++E +L+IE +GKKL E+ E+EEV++L +RV EA+R +
Sbjct: 390 TARAGKSGHAFSIVTQYDIEVWLRIENALGKKLDEYKVEKEEVMVLSDRVGEAQRHAITE 449
Query: 368 IKDSGNKRRRKGG 380
+KD KR +G
Sbjct: 450 MKDLHEKRGSRGA 462
>gi|325087574|gb|EGC40884.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus H88]
Length = 485
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/373 (60%), Positives = 292/373 (78%), Gaps = 7/373 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQAL+ + + F +L+PTRELA QISE FEA
Sbjct: 96 GRDLIGLAETGSGKTAAFALPILQALMNKPQ------SLFGLILAPTRELACQISEAFEA 149
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS IS+RCAV+VGG+DM+ Q ++LGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+D
Sbjct: 150 LGSLISVRCAVIVGGMDMVSQAISLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMD 209
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF LD+IL V+PR R+TYLFSATM+ KV+ LQRA L NP+++ +S KY
Sbjct: 210 EADRLLDLDFGPILDKILKVLPRERRTYLFSATMSSKVESLQRASLSNPLRVSISSNKYQ 269
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P KYKD YLVY+L E + S +VFTRT + T+ LA++LR LG +IP+
Sbjct: 270 TVATLLQSYLFIPHKYKDVYLVYLLNEYAGQSAIVFTRTVNETQRLAILLRTLGFGSIPL 329
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL+KF++ +IL+ TDVA+RGLDIPSVD+V+N+D+P++SK YIHRVGR
Sbjct: 330 HGQLSQSSRLGALSKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPSDSKTYIHRVGR 389
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G A S+V QY++E +L+IE +GKKL E+ E+EEV++L +RV EA+R +
Sbjct: 390 TARAGKSGHAFSIVTQYDIEVWLRIENALGKKLDEYKVEKEEVMVLSDRVGEAQRHAITE 449
Query: 368 IKDSGNKRRRKGG 380
+KD KR +G
Sbjct: 450 MKDLHEKRGSRGA 462
>gi|302886563|ref|XP_003042171.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256723080|gb|EEU36458.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 490
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/372 (59%), Positives = 289/372 (77%), Gaps = 7/372 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKT AFALP+LQALL+ + F VL+PTRELA QI + FEA
Sbjct: 102 GRDIIGLAETGSGKTAAFALPVLQALLDKPQ------PLFGLVLAPTRELATQIGQAFEA 155
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS ISLRCAV+VGG+DM+ Q +ALGK+PHI+VATPGRL+DHL TKGFSL TLKYL++D
Sbjct: 156 LGSLISLRCAVIVGGLDMVPQAIALGKKPHIIVATPGRLVDHLEKTKGFSLRTLKYLIMD 215
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF S+D+IL IPR R+TYLFSAT++ K++ LQRA L++PV++ +S KY
Sbjct: 216 EADRLLDMDFGPSIDKILKFIPRERRTYLFSATLSSKIESLQRASLRDPVRVSISSNKYQ 275
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P KD YLVY++ E + ST+VFTRT T+ +A++LR LG AIP+
Sbjct: 276 TVSTLIQHYMFIPFPQKDTYLVYLVNEHTGKSTIVFTRTVWETQRVAILLRTLGFGAIPL 335
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGALNKF+AG +IL+ TDVA+RGLDIP VD+V+NYD+P +SK YIHRVGR
Sbjct: 336 HGQLSQSSRLGALNKFRAGTRDILVATDVAARGLDIPKVDVVLNYDMPQDSKTYIHRVGR 395
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++GVAI+LV QY+LE Y +IE +GKKL E+P+E+EEV+ R+ EA+R +++
Sbjct: 396 TARAGKSGVAINLVTQYDLEIYARIEAALGKKLTEYPSEKEEVMTFQSRIQEAQRHARIE 455
Query: 368 IKDSGNKRRRKG 379
+K + KG
Sbjct: 456 MKSMSEAKGSKG 467
>gi|225556564|gb|EEH04852.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus G186AR]
Length = 485
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/373 (60%), Positives = 292/373 (78%), Gaps = 7/373 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQAL+ + + F +L+PTRELA QISE FEA
Sbjct: 96 GRDLIGLAETGSGKTAAFALPILQALMNKPQ------SLFGLILAPTRELACQISEAFEA 149
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS IS+RCAV+VGG+DM+ Q ++LGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+D
Sbjct: 150 LGSLISVRCAVIVGGMDMVSQAISLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMD 209
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF LD+IL V+PR R+TYLFSATM+ KV+ LQRA L NP+++ +S KY
Sbjct: 210 EADRLLDLDFGPILDKILKVLPRERRTYLFSATMSSKVESLQRASLSNPLRVSISSNKYQ 269
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P KYKD YLVY+L E + S +VFTRT + T+ LA++LR LG +IP+
Sbjct: 270 TVATLLQSYLFIPHKYKDVYLVYLLNEYAGQSAIVFTRTVNETQRLAILLRALGFGSIPL 329
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL+KF++ +IL+ TDVA+RGLDIPSVD+V+N+D+P++SK YIHRVGR
Sbjct: 330 HGQLSQSSRLGALSKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPSDSKTYIHRVGR 389
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G A S+V QY++E +L+IE +GKKL E+ E+EEV++L +RV EA+R +
Sbjct: 390 TARAGKSGHAFSIVTQYDIEVWLRIENALGKKLDEYKVEKEEVMVLSDRVGEAQRHAITE 449
Query: 368 IKDSGNKRRRKGG 380
+KD KR +G
Sbjct: 450 MKDLHEKRGSRGA 462
>gi|170094690|ref|XP_001878566.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647020|gb|EDR11265.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 453
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/366 (60%), Positives = 284/366 (77%), Gaps = 6/366 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+A TGSGKT AFALPILQ L E + FACVL+PTRELA QIS+QFE+
Sbjct: 54 GRDIIGVASTGSGKTAAFALPILQKLWEDPKG------LFACVLAPTRELAYQISQQFES 107
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + RCAV+VGG+DM Q +AL KRPHIVVATPGRLM HL TKGFSL ++K+LVLD
Sbjct: 108 LGSAMGARCAVIVGGMDMPAQAIALAKRPHIVVATPGRLMQHLEETKGFSLRSIKFLVLD 167
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF S+D+IL VIP+ R TYLFSATMT KV KLQRA L NPV+IE +SKY T
Sbjct: 168 EADRLLDLDFGASIDKILKVIPKERTTYLFSATMTTKVAKLQRASLSNPVRIEVSSKYQT 227
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y +P K KD YL+Y++ ++ +S ++FTRT + L+++LR LG A+P+
Sbjct: 228 VSTLLQYYLLMPLKDKDAYLIYLINSLAQNSIIMFTRTVHDAQRLSIILRTLGFPAVPLH 287
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS+RLGAL KFK+G +L+ TDVASRGLDIPSVD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 288 GQLSQSQRLGALGKFKSGGRRVLVATDVASRGLDIPSVDIVINFDIPTHSKDYIHRVGRT 347
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR G +I+LV QY++E +IE+++GKK+ +P + EE+ LL ERV+EA R++ +
Sbjct: 348 ARAGRAGKSITLVTQYDVELVQRIEQVVGKKMELWPTDPEEIALLKERVSEAARLAATEL 407
Query: 369 KDSGNK 374
++ G+K
Sbjct: 408 REQGSK 413
>gi|71022263|ref|XP_761361.1| hypothetical protein UM05214.1 [Ustilago maydis 521]
gi|74699927|sp|Q4P3U9.1|RRP3_USTMA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|46097669|gb|EAK82902.1| hypothetical protein UM05214.1 [Ustilago maydis 521]
Length = 551
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/378 (60%), Positives = 286/378 (75%), Gaps = 15/378 (3%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IGLAQTGSGKT AF +PILQAL + + FFACVL+PTRELA QIS+Q EAL
Sbjct: 142 RDVIGLAQTGSGKTAAFTIPILQALWDNPK------PFFACVLAPTRELAYQISQQVEAL 195
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GS I +R A +VGG+DMM Q++AL KRPH++VATPGRL DHL NTKGFSL L+YLV+DE
Sbjct: 196 GSTIGVRSATIVGGMDMMSQSIALSKRPHVIVATPGRLQDHLENTKGFSLRGLQYLVMDE 255
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADRLL+ DF +D++L IPR R+T LFSATMT KV KLQRA LKNPV++E +KY+TV
Sbjct: 256 ADRLLDMDFGPIIDKLLQSIPRERRTMLFSATMTTKVAKLQRASLKNPVRVEVDTKYTTV 315
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
TLKQ Y F+P +KD YLV++ E + S +VFTRT ++ L+++LR LG AIP+ G
Sbjct: 316 STLKQHYMFMPFAHKDTYLVHLANEQAGHSIIVFTRTVHDSQRLSILLRLLGFPAIPLHG 375
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+SQ RLGALNKFK G +IL+ TDVASRGLDIP+VD+V+NYDIPTNSKDYIHRVGRTA
Sbjct: 376 QLSQQARLGALNKFKTGGRSILVATDVASRGLDIPAVDLVVNYDIPTNSKDYIHRVGRTA 435
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA--EEEEVLLLLERVTEAKRISQMT 367
RAGR+G +++LV QY++E +IE +IG K+ EFP ++E V+LL ERV EA R +
Sbjct: 436 RAGRSGRSVTLVTQYDVELLQRIEAVIGLKMTEFPGGNDKEAVMLLSERVAEAHRAAVRE 495
Query: 368 IKDSG-------NKRRRK 378
+KD G KR+RK
Sbjct: 496 LKDKGVGSAGGSGKRKRK 513
>gi|238501386|ref|XP_002381927.1| ATP-dependent RNA helicase , putative [Aspergillus flavus NRRL3357]
gi|220692164|gb|EED48511.1| ATP-dependent RNA helicase , putative [Aspergillus flavus NRRL3357]
gi|391863856|gb|EIT73155.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 472
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/372 (59%), Positives = 292/372 (78%), Gaps = 7/372 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQAL++ + FF VL+PTRELA QIS+ FE
Sbjct: 89 GRDLIGLAETGSGKTAAFALPILQALMDKPSS------FFGLVLAPTRELAYQISQAFEG 142
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS IS+R VLVGG+DM+ Q++ALGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+D
Sbjct: 143 LGSTISVRSTVLVGGMDMVSQSIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMD 202
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYS 187
EADRLL+ DF LD+IL V+PR R+TYLFSATM+ KV+ LQRA L+NP+++ ++SK+
Sbjct: 203 EADRLLDMDFGPILDKILKVLPRERRTYLFSATMSSKVESLQRASLQNPLRVAVSSSKFQ 262
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL+Q Y F+P K+KD YLVY+L E S ++F RT T+ L+ LR LG AIP+
Sbjct: 263 TVSTLQQSYIFIPHKHKDLYLVYLLNEFVGQSCIIFCRTVHETQRLSFFLRLLGFGAIPL 322
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL KF++ +IL+ TDVA+RGLDIPSVD+V+N+D+P +SK +IHR+GR
Sbjct: 323 HGQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPGDSKTFIHRIGR 382
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++GVAIS QY++E +L+IE +GKKLPE+PAE++EV++L ERV+EA+R + +
Sbjct: 383 TARAGKSGVAISFATQYDVEAWLRIEGALGKKLPEYPAEKDEVMVLAERVSEAQRSAILE 442
Query: 368 IKDSGNKRRRKG 379
+K+ K+ +G
Sbjct: 443 MKNYDEKKGSRG 454
>gi|403164869|ref|XP_003324940.2| hypothetical protein PGTG_06477 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165434|gb|EFP80521.2| hypothetical protein PGTG_06477 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 518
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/372 (61%), Positives = 287/372 (77%), Gaps = 8/372 (2%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IGLAQTGSGKT AFALP+LQ+L + FF CVL+PTRELA QIS+QF+AL
Sbjct: 110 RDIIGLAQTGSGKTAAFALPVLQSLWNDPK------PFFCCVLAPTRELAYQISQQFDAL 163
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GS I ++ AV+VGG+DMM Q +AL KRPHI+VATPGRL DHL NTKGFSL LKYL++DE
Sbjct: 164 GSTIGVKTAVIVGGIDMMSQAIALSKRPHIIVATPGRLHDHLENTKGFSLRNLKYLIMDE 223
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADRLL+ DF +D+IL VIPR R+TYLFSATMT KV KLQRA L +PVK++ ++KY TV
Sbjct: 224 ADRLLDMDFGPVIDKILKVIPRERRTYLFSATMTTKVAKLQRASLVSPVKVQMSTKYDTV 283
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTC-DATRLLALMLRNLGQRAIPIS 248
D L Q Y F P K KD YLVY++ E+S S ++FTRT DA RL +++LR LG +IP+
Sbjct: 284 DGLVQLYMFFPFKNKDAYLVYLVNELSGKSMIIFTRTVYDANRL-SIILRLLGFPSIPLH 342
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS RL +LN+FK+G +IL+ TDVASRGLDIP+VD VIN+D+PTNSKDYIHRVGRT
Sbjct: 343 GQLSQSTRLSSLNQFKSGNRSILVATDVASRGLDIPTVDCVINFDLPTNSKDYIHRVGRT 402
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G A++LV QY++E +IE +IGKK+ EFP ++E+V LL ERV EA R + I
Sbjct: 403 ARAGRSGKAVTLVTQYDVELLQRIEGVIGKKMEEFPHDKEQVFLLSERVGEASREATREI 462
Query: 369 KDSGNKRRRKGG 380
+D+ +K G
Sbjct: 463 RDNERNGGKKSG 474
>gi|452839340|gb|EME41279.1| hypothetical protein DOTSEDRAFT_73630 [Dothistroma septosporum
NZE10]
Length = 513
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/368 (60%), Positives = 288/368 (78%), Gaps = 4/368 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKT AFALPILQAL+ ++++ F VL+PTRELA QIS+QFEA
Sbjct: 120 GKDIIGLAETGSGKTAAFALPILQALMAAPQHEQHK---FGLVLAPTRELAYQISQQFEA 176
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I++RCAVLVGG+DM+ Q +AL K PHIVVATPGRL+DHL NTKGFS+ +LKYLV+D
Sbjct: 177 LGSLINVRCAVLVGGMDMVPQAIALNKNPHIVVATPGRLLDHLENTKGFSMRSLKYLVMD 236
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYS 187
EADRLL+ DF LD+IL V+P R+T LFSATM+ K+ L RA L+NPV++ ++S Y
Sbjct: 237 EADRLLDLDFGPILDKILQVLPSKRRTMLFSATMSTKLNNLTRAALQNPVRVSISSSSYQ 296
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV L Q+Y F+P K+KD YLVY+L E + + +VFTRT + T+ +A +LR LG+ AIP+
Sbjct: 297 TVKNLMQRYIFIPHKFKDIYLVYLLNEFAGQTCIVFTRTINETQRIAFLLRALGRSAIPL 356
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G M+QS RLGALNKF+ G IL+ TDVA+RGLDIPSVD+V+N+D+P +SK Y+HRVGR
Sbjct: 357 HGQMNQSARLGALNKFRGGSREILVATDVAARGLDIPSVDLVLNFDLPPDSKTYVHRVGR 416
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++GVAIS+V QY++E Y +IEK +GKKL E+ AE +EV++ RV EA+RI+
Sbjct: 417 TARAGKSGVAISVVTQYDIEIYQRIEKALGKKLDEYAAERDEVMVFAPRVAEAQRIAITE 476
Query: 368 IKDSGNKR 375
+K+ KR
Sbjct: 477 MKNEHEKR 484
>gi|169768960|ref|XP_001818950.1| ATP-dependent rRNA helicase RRP3 [Aspergillus oryzae RIB40]
gi|91207780|sp|Q2UNB7.1|RRP3_ASPOR RecName: Full=ATP-dependent rRNA helicase rrp3
gi|83766808|dbj|BAE56948.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 472
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/372 (59%), Positives = 292/372 (78%), Gaps = 7/372 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQAL++ + FF VL+PTRELA QIS+ FE
Sbjct: 89 GRDLIGLAETGSGKTAAFALPILQALMDKPSS------FFGLVLAPTRELAYQISQAFEG 142
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS IS+R VLVGG+DM+ Q++ALGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+D
Sbjct: 143 LGSTISVRSTVLVGGMDMVSQSIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMD 202
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYS 187
EADRLL+ DF LD+IL V+PR R+TYLFSATM+ KV+ LQRA L+NP+++ ++SK+
Sbjct: 203 EADRLLDMDFGPILDKILKVLPRERRTYLFSATMSSKVESLQRASLQNPLRVAVSSSKFQ 262
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL+Q Y F+P K+KD YLVY+L E S ++F RT T+ L+ LR LG AIP+
Sbjct: 263 TVSTLQQSYIFIPHKHKDLYLVYLLNEFVGQSCIIFCRTVHETQRLSFFLRLLGFGAIPL 322
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL KF++ +IL+ TDVA+RGLDIPSVD+V+N+D+P +SK +IHR+GR
Sbjct: 323 HGQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPGDSKTFIHRIGR 382
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++GVAIS QY++E +L+IE +GKKLPE+PAE++EV++L ERV+EA+R + +
Sbjct: 383 TARAGKSGVAISFATQYDVEAWLRIEGALGKKLPEYPAEKDEVMVLAERVSEAQRSAILE 442
Query: 368 IKDSGNKRRRKG 379
+K+ K+ +G
Sbjct: 443 MKNYDEKKGSRG 454
>gi|154315003|ref|XP_001556825.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|160358659|sp|A6RW56.1|RRP3_BOTFB RecName: Full=ATP-dependent rRNA helicase rrp3
gi|347841755|emb|CCD56327.1| similar to ATP-dependent rRNA helicase rrp3 [Botryotinia
fuckeliana]
Length = 486
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/373 (59%), Positives = 292/373 (78%), Gaps = 7/373 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQALL+ + F VL+PTRELA QIS+QFEA
Sbjct: 97 GRDLIGLAETGSGKTAAFALPILQALLDKPQ------PLFGLVLAPTRELAYQISQQFEA 150
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+DM+ Q++ALGK+PHI+VATPGRL+DHL NTKGFSL +LKYLV+D
Sbjct: 151 LGSVIRVKCAVIVGGMDMVPQSIALGKKPHIIVATPGRLLDHLENTKGFSLRSLKYLVMD 210
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF LD+IL V+PR R+TYLFSAT++ KV+ LQRA LK+P+++ +S KY
Sbjct: 211 EADRLLDLDFGPILDKILKVLPRERRTYLFSATISSKVESLQRASLKDPLRVSISSNKYQ 270
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P +KD YL+Y+L E + S ++FTRT + T+ +A++LR LG AIP+
Sbjct: 271 TVSTLIQNYIFIPLIHKDTYLIYLLNEFAGQSAIIFTRTVNETQRIAILLRTLGFGAIPL 330
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGALNKF+AG IL+ TDVA+RGLDIPSVD+V+NYD+P +SK YIHRVGR
Sbjct: 331 HGQLSQSSRLGALNKFRAGSREILVATDVAARGLDIPSVDVVLNYDVPQDSKTYIHRVGR 390
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G AIS+V QY+LE +++IE +GKK E+P ++EV++ RV EA+R ++
Sbjct: 391 TARAGKSGHAISVVTQYDLEIFMRIEAALGKKQVEYPTVKDEVMVFKPRVEEAQRHARNE 450
Query: 368 IKDSGNKRRRKGG 380
+K+ R +KG
Sbjct: 451 MKNLHEDRGKKGA 463
>gi|167526114|ref|XP_001747391.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774226|gb|EDQ87858.1| predicted protein [Monosiga brevicollis MX1]
Length = 504
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/354 (61%), Positives = 275/354 (77%), Gaps = 4/354 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKT AFALP+L LL + FFA VL+PTRELA QI + F A
Sbjct: 118 GKDVIGLAETGSGKTAAFALPVLHDLLATKGKKE----FFALVLAPTRELAFQIRQTFNA 173
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I L+ AVLVGG+DM Q +AL K+PH+++ATPGRL+DHL NTKGF L L+YL++D
Sbjct: 174 LGSPIGLKSAVLVGGIDMTTQAIALAKKPHVLIATPGRLVDHLENTKGFHLKALRYLIMD 233
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN D+EK LD+IL VIPR R+T+LFSATMT KV KLQRA L++PVK+E SKY T
Sbjct: 234 EADRMLNMDYEKELDKILAVIPRERRTFLFSATMTSKVGKLQRASLRDPVKVEVNSKYKT 293
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTL Q+Y FVP K+KDCYL+Y++ ++ +S ++F TC+ L+LR+LG A+ +
Sbjct: 294 VDTLIQRYMFVPQKFKDCYLIYLMNQLRGNSFIIFCSTCNNVMKATLVLRDLGFDAVCLH 353
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ KRLGAL KF + IL+ TDVASRGLDIP VD+V+NYDIPT+SKDYIHRVGRT
Sbjct: 354 GQMSQPKRLGALAKFTSQSHTILVATDVASRGLDIPHVDVVVNYDIPTHSKDYIHRVGRT 413
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
ARAGR+G AI++ QY++E + +IE LIGKK+ E+P E +VL LLERV++A+R
Sbjct: 414 ARAGRSGHAITIATQYDVELFQRIEALIGKKMEEYPTESSQVLQLLERVSDAQR 467
>gi|443893885|dbj|GAC71341.1| ATP-dependent RNA helicase [Pseudozyma antarctica T-34]
Length = 562
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/378 (60%), Positives = 285/378 (75%), Gaps = 15/378 (3%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IGLAQTGSGKT AF +PILQAL + + FFACVL+PTRELA QIS+Q EAL
Sbjct: 153 RDVIGLAQTGSGKTAAFTIPILQALWDNPK------PFFACVLAPTRELAYQISQQVEAL 206
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GS I +R A +VGG+DMM Q++AL KRPH++VATPGRL DHL NTKGFSL L+YLV+DE
Sbjct: 207 GSTIGVRSATIVGGMDMMSQSIALSKRPHVIVATPGRLQDHLENTKGFSLRGLQYLVMDE 266
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADRLL+ DF +D++L IPR R+T LFSATMT KV KLQRA LKNPV++E +KY+TV
Sbjct: 267 ADRLLDMDFGPIIDKLLQSIPRERRTMLFSATMTTKVAKLQRASLKNPVRVEVDTKYTTV 326
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
TLKQ Y F+P +KD YLV++ E + S +VFTRT ++ L+++LR LG AIP+ G
Sbjct: 327 STLKQHYLFMPFAHKDTYLVHLANEQAGHSIIVFTRTVHDSQRLSILLRLLGFPAIPLHG 386
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+SQ RLGALNKFK G +IL+ TDVASRGLDIP+VD+V+NYDIPTNSKDYIHRVGRTA
Sbjct: 387 QLSQQARLGALNKFKTGGRSILVATDVASRGLDIPAVDLVVNYDIPTNSKDYIHRVGRTA 446
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA--EEEEVLLLLERVTEAKRISQMT 367
RAGR+G +++LV QY++E +IE +I K+ EFP ++E V+LL ERV EA R +
Sbjct: 447 RAGRSGRSVTLVTQYDVELLQRIEAVIALKMTEFPGGNDKEAVMLLSERVAEAHRAAVRE 506
Query: 368 IKDSG-------NKRRRK 378
+KD G KR+RK
Sbjct: 507 LKDKGVGSAGGSGKRKRK 524
>gi|145539279|ref|XP_001455334.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423133|emb|CAK87937.1| unnamed protein product [Paramecium tetraurelia]
Length = 451
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/388 (57%), Positives = 294/388 (75%), Gaps = 8/388 (2%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
KD+IGLA+TGSGKT AF LPILQ LL A Q ++A +LSPTREL +QI E F+A+
Sbjct: 50 KDIIGLAETGSGKTLAFGLPILQHLL--ANPQ----PYYALILSPTRELCVQIQEHFQAI 103
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
G+ I+L+ V++GG+D + Q AL ++PHI++ TPG+++ HL NTKGF+L LK+LVLDE
Sbjct: 104 GASIALKSVVILGGMDPLAQAKALAQKPHIIIGTPGKILYHLENTKGFNLKQLKFLVLDE 163
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
AD+LLN DFE+ ++ IL++IP+ R TYLFSATMT KV KLQRA LK+PVKIE +SKY TV
Sbjct: 164 ADKLLNMDFEREINAILDIIPKERNTYLFSATMTNKVSKLQRASLKDPVKIEVSSKYQTV 223
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
TL+Q Y FVP KYK+ YLVY+L E++ +++VF TC + L+LRNLG +AI I G
Sbjct: 224 STLQQNYLFVPDKYKETYLVYLLNELAGLTSIVFVATCQMAIKITLLLRNLGFQAIAIHG 283
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
MSQ+KRL + NKFK+ E N+LI TDVASRGLDIP VD+V+N+DIP N+K+Y+HRVGRTA
Sbjct: 284 QMSQAKRLSSFNKFKSKESNLLIATDVASRGLDIPFVDLVLNFDIPQNAKEYVHRVGRTA 343
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK 369
RAG++G AISLV QY++E Y +IE+LI K+L ++P EE +V++ ERV EA RI+ +K
Sbjct: 344 RAGKSGKAISLVTQYDVEMYQKIEQLIEKELSQYPLEESDVMVFYERVQEANRIATQELK 403
Query: 370 DSGNKRRRKGG-DEDDDIGRQFG-INKK 395
D K+ +K DEDD R+ INKK
Sbjct: 404 DLLEKKVKKTAVDEDDLDDRKIKQINKK 431
>gi|388856716|emb|CCF49676.1| probable DEAD box protein (putative RNA helicase) [Ustilago hordei]
Length = 556
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/413 (57%), Positives = 296/413 (71%), Gaps = 32/413 (7%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IGLAQTGSGKT AF +PILQAL + + FFACVL+PTRELA QIS+Q EAL
Sbjct: 147 RDVIGLAQTGSGKTAAFTIPILQALWDNPK------PFFACVLAPTRELAYQISQQVEAL 200
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GS I +R A +VGG+DMM Q++AL KRPH++VATPGRL DHL NTKGFSL L+YLV+DE
Sbjct: 201 GSTIGVRSATIVGGMDMMSQSIALSKRPHVIVATPGRLQDHLENTKGFSLRGLQYLVMDE 260
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADRLL+ DF +D++L IPR R+T LFSATMT KV KLQRA LKNPV++E +KY+TV
Sbjct: 261 ADRLLDMDFGPIIDKLLQSIPRERRTMLFSATMTTKVAKLQRASLKNPVRVEVDTKYTTV 320
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
TLKQ Y F+P +KD YLV++ E + S +VFTRT ++ L+++LR LG AIP+ G
Sbjct: 321 STLKQHYLFMPFAHKDTYLVHLANEQAGHSIIVFTRTVHDSQRLSILLRLLGFPAIPLHG 380
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+SQ RLGALNKFK G +IL+ TDVASRGLDIP+VD+V+NYDIPTNSKDYIHRVGRTA
Sbjct: 381 QLSQQARLGALNKFKTGGRSILVATDVASRGLDIPAVDLVVNYDIPTNSKDYIHRVGRTA 440
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA--EEEEVLLLLERVTEAKRISQMT 367
RAGR+G +++LV QY++E +IE +I K+ EFP ++E V+LL ERV EA R +
Sbjct: 441 RAGRSGRSVTLVTQYDVELLQRIEAVIALKMTEFPGGNDKEAVMLLSERVAEAHRAAVRE 500
Query: 368 IKD-------SGNKRRRKG----GDE---DDDI----------GRQFGINKKK 396
+KD KR+RK GDE DDD GR N+KK
Sbjct: 501 LKDKGVGGAGGSGKRKRKMDGKYGDEMDRDDDQVQPGMPVSGNGRHMNQNRKK 553
>gi|398406547|ref|XP_003854739.1| RNA-dependent ATPase [Zymoseptoria tritici IPO323]
gi|339474623|gb|EGP89715.1| hypothetical protein MYCGRDRAFT_84402 [Zymoseptoria tritici IPO323]
Length = 446
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/373 (59%), Positives = 286/373 (76%), Gaps = 10/373 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKT AFALPILQ LL+ + F VL+PTRELA QIS+QFEA
Sbjct: 73 GKDIIGLAETGSGKTAAFALPILQELLDKPQ------PMFGLVLAPTRELAYQISQQFEA 126
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS IS+RCAV+VGG+DM+ Q +AL K+PHIVVATPGRL+DHL NTKGFSL LKYLV+D
Sbjct: 127 LGSLISVRCAVIVGGMDMVPQAIALAKKPHIVVATPGRLLDHLENTKGFSLRQLKYLVMD 186
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYS 187
EADRLL+ DF LD+I V+PR R+T LFSATM+ K+ L RA L+ PVK+ ++S Y
Sbjct: 187 EADRLLDLDFGPILDKIFQVLPRERRTMLFSATMSTKLNNLTRAALQQPVKVSISSSSYQ 246
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV L Q+Y F+P K+KD YLVY+L E + + +VFTRT + T +A +LR LG+ AIP+
Sbjct: 247 TVKNLMQRYIFIPHKFKDIYLVYLLNEFAGQTCIVFTRTINETARIAFLLRALGRSAIPL 306
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G M+QS RLGALNKF+ G +IL+ TDVA+RGLDIPSVD+V+N+D+P +SK Y+HRVGR
Sbjct: 307 HGQMNQSARLGALNKFRGGHRDILVATDVAARGLDIPSVDLVLNFDLPPDSKTYVHRVGR 366
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++GVAIS+V QY++E Y +IEK +GKKL E P E +EV++ RV EA+RI+
Sbjct: 367 TARAGKSGVAISVVTQYDIEIYQRIEKALGKKLEEHPTERDEVMVFAPRVGEAQRIAVTE 426
Query: 368 IKDSGNKRRRKGG 380
+K N+ ++GG
Sbjct: 427 MK---NEHEKRGG 436
>gi|302412236|ref|XP_003003951.1| ATP-dependent rRNA helicase RRP3 [Verticillium albo-atrum VaMs.102]
gi|261357856|gb|EEY20284.1| ATP-dependent rRNA helicase RRP3 [Verticillium albo-atrum VaMs.102]
Length = 486
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/374 (59%), Positives = 285/374 (76%), Gaps = 7/374 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D+IGLA+TGSGKT AFALP+LQALLE FA V++PTRELA QI++ FE
Sbjct: 97 AGRDVIGLAETGSGKTAAFALPVLQALLEKPSG------LFAVVMAPTRELAAQIAQTFE 150
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
ALGS I+LRCAV+VGG+DM+QQ +ALGK+PH+VVATPGRL+DHL TKGFSL +LKYLVL
Sbjct: 151 ALGSLINLRCAVIVGGLDMVQQAIALGKKPHVVVATPGRLLDHLEKTKGFSLRSLKYLVL 210
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK-Y 186
DEADRLL+ DF S+D+IL IPR R TYLFSATM+ KV+ LQRA LK+P ++ S Y
Sbjct: 211 DEADRLLDMDFGPSIDKILKFIPRERHTYLFSATMSSKVESLQRASLKDPARVSVQSNGY 270
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
V TL Q + F+P KD Y V+++ +T+VF RT T+ LA++LR LG A+P
Sbjct: 271 QVVSTLLQNFLFIPHALKDVYCVHLINSFIGQTTIVFLRTVHDTQRLAILLRTLGFSALP 330
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
+ G +SQS RLGALNKF+AG +IL+ TDVA+RGLDIP+VD+VINYD+P +SK YIHRVG
Sbjct: 331 LHGQLSQSARLGALNKFRAGSRDILVATDVAARGLDIPNVDVVINYDLPQDSKTYIHRVG 390
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQM 366
RTARAG++G A+SLV QY+LE +L+IE +GKKL EFP E+EEV++ RV EA+R +++
Sbjct: 391 RTARAGKSGRALSLVTQYDLEIWLRIEASMGKKLDEFPTEKEEVMVFQARVEEAQRHARI 450
Query: 367 TIKDSGNKRRRKGG 380
+K R +KG
Sbjct: 451 EMKHLMENRGKKGA 464
>gi|324513918|gb|ADY45697.1| ATP-dependent RNA helicase [Ascaris suum]
Length = 435
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/352 (61%), Positives = 277/352 (78%), Gaps = 6/352 (1%)
Query: 19 GSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCA 78
GSGKT AFALPILQALL+ + FA +L+PTRELA QI+EQF+ALG+ I L A
Sbjct: 37 GSGKTAAFALPILQALLDTPQK------LFALILTPTRELAFQIAEQFDALGASIGLLVA 90
Query: 79 VLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDF 138
V+VGGVDM+ Q LAL KRPH++VATPGRL+DHL NTKGF+L LK+LV+DEADR+LN DF
Sbjct: 91 VIVGGVDMVTQALALAKRPHVIVATPGRLVDHLENTKGFNLRALKFLVMDEADRILNMDF 150
Query: 139 EKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRF 198
E LD+IL V+P+ R+TYL+SATMTKKV KL+RA L++P ++E SKY TVD LKQ Y F
Sbjct: 151 EVELDKILKVLPKERRTYLYSATMTKKVAKLERASLRDPARVEVCSKYKTVDKLKQHYIF 210
Query: 199 VPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLG 258
+P KYK+ YLVYIL E++ + +VF TC +T ALMLR LG A+P+ G MSQ+KRLG
Sbjct: 211 IPQKYKEAYLVYILNEMAGQTAIVFCATCASTMKTALMLRQLGFGAVPLHGQMSQAKRLG 270
Query: 259 ALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAI 318
+LNKFK+ IL+CTDVASRGLDIP+VD V+NYD+P+ SKDY+HRVGRTARAGR+GV+I
Sbjct: 271 SLNKFKSKVRPILVCTDVASRGLDIPNVDAVLNYDVPSQSKDYVHRVGRTARAGRSGVSI 330
Query: 319 SLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKD 370
+ V QY++E Y +IE LIGKKLP + E +V+LL+ERV EA + ++ +K+
Sbjct: 331 TFVTQYDVEVYQRIEHLIGKKLPLYETVENDVMLLVERVEEAMKAAKQELKE 382
>gi|67527984|ref|XP_661837.1| hypothetical protein AN4233.2 [Aspergillus nidulans FGSC A4]
gi|74681080|sp|Q5B5E7.1|RRP3_EMENI RecName: Full=ATP-dependent rRNA helicase rrp3
gi|40740142|gb|EAA59332.1| hypothetical protein AN4233.2 [Aspergillus nidulans FGSC A4]
gi|259481158|tpe|CBF74430.1| TPA: ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B5E7] [Aspergillus
nidulans FGSC A4]
Length = 465
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/387 (56%), Positives = 290/387 (74%), Gaps = 14/387 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKT AFALP+LQAL+E + F VL+PTRELA QIS+ FE
Sbjct: 83 GRDVIGLAETGSGKTAAFALPMLQALMEAPQT------LFGLVLAPTRELAYQISQAFET 136
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I +RCAV+VGG+DM+ Q++ALGK+PHI+VATPGRL+DHL NTKGFSL LKYL +D
Sbjct: 137 LGSTIGVRCAVIVGGMDMVAQSIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLAID 196
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +SLD+I+ ++PR R TYLFSATM+ KV+ LQRA L NPV++ +SKY T
Sbjct: 197 EADRLLDMDFGESLDKIIRILPRTRHTYLFSATMSTKVESLQRASLSNPVRVSVSSKYQT 256
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL+ Y +P K+K+ YLVY+L E + S ++FT T T+ +A MLR LG AIP+
Sbjct: 257 VSTLQSSYICIPHKHKNLYLVYLLNEFAGQSAIIFTTTVHETQRVAFMLRALGFGAIPLH 316
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS RLGAL KF++ +IL+ TDVA+RGLDIPSVD+V N+D+P +SK YIHRVGRT
Sbjct: 317 GQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVFNFDLPMDSKTYIHRVGRT 376
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG++GVAIS V QY++E +L+IE + KKLPE+ E++EV+++ ERV EA R + + +
Sbjct: 377 ARAGKSGVAISFVTQYDVEVWLRIEHALSKKLPEYQVEKDEVMVMSERVAEASRQATIEM 436
Query: 369 KDSGNKRRRKGGDEDDDIGRQFGINKK 395
K K+ + G++FG K+
Sbjct: 437 KSFDEKKGAR--------GKKFGKGKR 455
>gi|343428869|emb|CBQ72414.1| probable DEAD box protein (putative RNA helicase) [Sporisorium
reilianum SRZ2]
Length = 568
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/379 (59%), Positives = 285/379 (75%), Gaps = 15/379 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
+D+IGLAQTGSGKT AF +PILQAL + + FFACVL+PTRELA QIS+Q EA
Sbjct: 158 ARDVIGLAQTGSGKTAAFTIPILQALWDNPK------PFFACVLAPTRELAYQISQQVEA 211
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I +R A +VGG+DMM Q++AL KRPH++VATPGRL DHL NTKGFSL L+YLV+D
Sbjct: 212 LGSTIGVRSATIVGGMDMMSQSIALSKRPHVIVATPGRLQDHLENTKGFSLRGLQYLVMD 271
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +D++L IPR R+T LFSATMT KV KLQRA LKNPV++E +KY+T
Sbjct: 272 EADRLLDMDFGPIIDKLLQSIPRERRTMLFSATMTTKVAKLQRASLKNPVRVEVDTKYTT 331
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TLKQ Y F+P +KD YLV++ E + S +VFTRT ++ L+++LR LG AIP+
Sbjct: 332 VSTLKQHYLFMPFAHKDTYLVHLANEQAGHSIIVFTRTVHDSQRLSILLRLLGFPAIPLH 391
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQ RLGALNKFK G +IL+ TDVASRGLDIP+VD+V+NYDIPTNSKDYIHRVGRT
Sbjct: 392 GQLSQQARLGALNKFKTGGRSILVATDVASRGLDIPAVDLVVNYDIPTNSKDYIHRVGRT 451
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA--EEEEVLLLLERVTEAKRISQM 366
ARAGR+G +++LV QY++E +IE +IG K+ EFP ++E V+LL ERV EA R +
Sbjct: 452 ARAGRSGRSVTLVTQYDVELLQRIEAVIGLKMTEFPGGNDKEAVMLLSERVAEAHRAAVR 511
Query: 367 TIKD-------SGNKRRRK 378
+KD KR+RK
Sbjct: 512 ELKDKGVGGAGGSGKRKRK 530
>gi|400595961|gb|EJP63749.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 472
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/370 (59%), Positives = 286/370 (77%), Gaps = 7/370 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKT AFALP+LQALLE + F VL+PTRELA QI + FEA
Sbjct: 87 GRDVIGLAETGSGKTAAFALPMLQALLEKPQ------PLFGLVLAPTRELAAQIGQTFEA 140
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ ISLRCAV+VGG+DM+ Q +ALGK+PH++VATPGRL+DHL TKGFSL TLKYLV+D
Sbjct: 141 LGALISLRCAVIVGGLDMVPQAIALGKKPHVIVATPGRLVDHLEKTKGFSLRTLKYLVMD 200
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYS 187
EADRLL+ DF S+D++L +PR R+TYLFSATM+ +V+ LQRA L++PV++ ++SKY
Sbjct: 201 EADRLLDMDFGPSIDKLLKFVPRERRTYLFSATMSSRVESLQRASLRDPVRVSVSSSKYQ 260
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P KD YL++I+ E + S +VFTRT T+ +A++LR LG AIP+
Sbjct: 261 TVSTLLQHYVFIPHIRKDTYLIHIINEFAGKSCIVFTRTVYETQRVAILLRTLGFGAIPL 320
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGALNKF+ G IL+ TDVA+RGLDIP VD+V+NYDIP++SK YIHRVGR
Sbjct: 321 HGQLSQSARLGALNKFRGGTREILVATDVAARGLDIPKVDIVLNYDIPSDSKTYIHRVGR 380
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++GVAISLV QY+LE + +IE +GKKL EFP E+EEV+ RV EA+R ++
Sbjct: 381 TARAGKSGVAISLVTQYDLELFTRIEAALGKKLDEFPTEKEEVMTFQARVEEAQRHARNE 440
Query: 368 IKDSGNKRRR 377
+K+ R +
Sbjct: 441 MKNVMESRNK 450
>gi|19114747|ref|NP_593835.1| ATP-dependent RNA helicase Rrp3 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74654514|sp|Q9P6N8.1|RRP3_SCHPO RecName: Full=ATP-dependent rRNA helicase rrp3
gi|7708606|emb|CAB90153.1| ATP-dependent RNA helicase Rrp3 (predicted) [Schizosaccharomyces
pombe]
Length = 465
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/370 (59%), Positives = 285/370 (77%), Gaps = 6/370 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IGLAQTGSGKT AFALP++Q L FFA VL+PTRELA QISEQFEA+
Sbjct: 84 RDVIGLAQTGSGKTAAFALPVIQELWN------NPSPFFAVVLAPTRELAYQISEQFEAI 137
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
G I +R V+VGG+DM+ Q +AL K+PH++V TPGRLMDHL NTKGFSL LKYL++DE
Sbjct: 138 GGSIGVRSVVIVGGMDMVTQAVALSKKPHVLVCTPGRLMDHLENTKGFSLKNLKYLIMDE 197
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADRLL+ DF +D+IL +IP R+T LFSATMT KV+KLQRA L PV++ +SK+STV
Sbjct: 198 ADRLLDMDFGPIIDKILKIIPHERRTLLFSATMTSKVEKLQRASLHQPVRVAVSSKFSTV 257
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
DTL Q+Y F P K+KD YLVY++ E++ +S ++F RT + T+ LA++LR LG AIP+ G
Sbjct: 258 DTLIQRYLFFPFKHKDTYLVYLVNELAGNSIIIFARTVNDTQRLAILLRTLGFSAIPLHG 317
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+SQS RLGALNKFK+G + L+ TDVA+RGLDIP VD+VINYDIPT+SK YIHRVGRTA
Sbjct: 318 QLSQSNRLGALNKFKSGARSTLVATDVAARGLDIPLVDVVINYDIPTDSKAYIHRVGRTA 377
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK 369
RAGR G +I+LV QY+LE +L+IE IGKK+ E+ ++E V LL ERV EA+R + + +K
Sbjct: 378 RAGRAGKSIALVTQYDLEPFLRIEATIGKKMQEYEIDKEGVFLLSERVGEAQREAIIQMK 437
Query: 370 DSGNKRRRKG 379
+ ++R+ KG
Sbjct: 438 EIHDRRKSKG 447
>gi|225718584|gb|ACO15138.1| Probable ATP-dependent RNA helicase DDX47 [Caligus clemensi]
Length = 470
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/363 (64%), Positives = 289/363 (79%), Gaps = 9/363 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALP+LQALLE + QR FA +L+PTRELA QISE FE
Sbjct: 67 GRDVIGLAETGSGKTGAFALPVLQALLE--KPQR----LFALILTPTRELAYQISETFEK 120
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG I ++C VLVGG+DMM Q L LGK+PHI+VATPGRL+DH+ NTKGF L +LKYL++D
Sbjct: 121 LGKSIGIKCGVLVGGMDMMSQALVLGKKPHIIVATPGRLIDHMENTKGFDLRSLKYLIMD 180
Query: 129 EADRLLNDDFEKSLDEILNVIPRM--RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
EADR+LN DFE +D+IL+ +PR R+ LFSATMTKKV KLQRA L+NPV++E +SKY
Sbjct: 181 EADRILNMDFEIEVDKILSSLPRGEGRKNMLFSATMTKKVAKLQRASLQNPVRVEVSSKY 240
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
TVD L Q Y F+P KYK+ YLV+I+ E++ +S ++F+ TC T LAL+LRNLG AIP
Sbjct: 241 QTVDKLLQYYLFIPLKYKEMYLVHIINELAGNSFIIFSSTCSGTLKLALLLRNLGFTAIP 300
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
++G MSQ+KRL +LNKFK +ILI TDVASRGLDIP VD+VINYDIPT+SKDYIHRVG
Sbjct: 301 LNGQMSQNKRLASLNKFKTKSRSILIATDVASRGLDIPHVDIVINYDIPTHSKDYIHRVG 360
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEF-PAEEEEVLLLLERVTEAKRISQ 365
RTARAGR+G AI+ V QY++E Y +IE LIGKKLP + A EEEV++L +RV EA R ++
Sbjct: 361 RTARAGRSGRAITFVCQYDVELYQRIETLIGKKLPLYSSATEEEVMVLADRVNEAVRFAK 420
Query: 366 MTI 368
M I
Sbjct: 421 MEI 423
>gi|258563612|ref|XP_002582551.1| ATP-dependent rRNA helicase RRP3 [Uncinocarpus reesii 1704]
gi|237908058|gb|EEP82459.1| ATP-dependent rRNA helicase RRP3 [Uncinocarpus reesii 1704]
Length = 472
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/373 (59%), Positives = 288/373 (77%), Gaps = 7/373 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKT AFALPILQAL++ + + F VL+PTRELA QISEQ EA
Sbjct: 83 GRDVIGLAETGSGKTAAFALPILQALMDKPQ------SMFGLVLAPTRELAYQISEQVEA 136
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS IS+RCAV+VGG+DM+ Q +ALGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+D
Sbjct: 137 LGSLISVRCAVIVGGMDMVSQAIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMD 196
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF LD+IL V+P+ R+TYLFSATM+ KV+ LQRA L NP+++ +S KY
Sbjct: 197 EADRLLDLDFGPILDKILKVLPKERRTYLFSATMSSKVESLQRASLSNPLRVSISSNKYQ 256
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P KYKD Y VY+L E S +VFTRT + T+ LA++LR LG AIP+
Sbjct: 257 TVATLLQNYLFIPHKYKDIYFVYLLNEFPGQSVIVFTRTVNETQRLAILLRALGFGAIPL 316
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL KF++ NIL+ TDVA+RGLDIPSVD+V+NYD+P++SK YIHRVGR
Sbjct: 317 HGQLSQSARLGALGKFRSRSRNILVATDVAARGLDIPSVDLVLNYDLPSDSKTYIHRVGR 376
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G A SLV Q+++E + +IE +GK E+ E+EEV++L +RV+EA+R +
Sbjct: 377 TARAGKSGHAFSLVTQFDIEIWQRIEGALGKTFDEYKTEKEEVMVLSDRVSEAQRHAITE 436
Query: 368 IKDSGNKRRRKGG 380
+K+ R +KG
Sbjct: 437 MKELHENRGKKGA 449
>gi|395333626|gb|EJF66003.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 461
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/379 (58%), Positives = 290/379 (76%), Gaps = 11/379 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+A TGSGKT AFALPILQ L E + FACV++PTRELA QI++QFE+
Sbjct: 60 GRDIIGVASTGSGKTAAFALPILQKLWEDPKG------LFACVIAPTRELAFQITQQFES 113
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+GS + +RCA ++GGVD+ Q +AL K+PH++VATPGRL++HL TKGFSL +LK+LVLD
Sbjct: 114 IGSAMGVRCATIIGGVDIQSQKIALAKKPHVIVATPGRLLEHLEETKGFSLRSLKFLVLD 173
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF LD+IL +IP+ R TYLFSATMT KV KLQRA L NPV++E SKYST
Sbjct: 174 EADRLLDMDFGPILDKILKLIPKERTTYLFSATMTTKVAKLQRASLSNPVRVEVNSKYST 233
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y +P KD +L+Y+ ++ +S ++FTRT + L++MLR+LG AIP+
Sbjct: 234 VSTLLQYYLLMPLPQKDVHLIYLANTLAQNSMIIFTRTVHDAQRLSIMLRSLGFPAIPLH 293
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS RLGAL KFKAG +IL+ TDVASRGLDIPSVD+VINYDIPT+SKDYIHRVGRT
Sbjct: 294 GQLSQSARLGALGKFKAGGRSILVATDVASRGLDIPSVDIVINYDIPTHSKDYIHRVGRT 353
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+LV QY++E L+IE++I KK+ +P +++EV LL ERV EA R++ +
Sbjct: 354 ARAGRSGKSITLVTQYDVELVLRIEQVIEKKMELWPVDKDEVALLRERVDEAGRLAATEL 413
Query: 369 KDSG-----NKRRRKGGDE 382
K+ G K+R++G +E
Sbjct: 414 KEQGIKGGHGKKRKRGREE 432
>gi|336373869|gb|EGO02207.1| hypothetical protein SERLA73DRAFT_178026 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386778|gb|EGO27924.1| hypothetical protein SERLADRAFT_462194 [Serpula lacrymans var.
lacrymans S7.9]
Length = 449
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/372 (60%), Positives = 281/372 (75%), Gaps = 6/372 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IG+A TGSGKT AFALPILQ L E + FACVL+PTRELA QIS+QFE+
Sbjct: 52 GKDIIGVASTGSGKTAAFALPILQKLWEEPK------GLFACVLAPTRELAYQISQQFES 105
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +RCAV+VGGV + Q +AL K+PH+VVATPGRL+ HL TKGF L LK+LVLD
Sbjct: 106 LGSDMGVRCAVIVGGVPTVPQAVALAKKPHVVVATPGRLLWHLQETKGFGLANLKFLVLD 165
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF + +D+IL VIP+ R TYLFSATMT KV KLQRA LKNPV++E A KY T
Sbjct: 166 EADRLLDMDFGQVIDDILKVIPKQRTTYLFSATMTSKVAKLQRASLKNPVRVEVAGKYQT 225
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y F+P K KD LVY++ ++ +S ++FTRT L ++LR LG A+P+
Sbjct: 226 VSTLLQYYLFIPLKDKDVNLVYLVNALAQNSIIIFTRTVHDAARLTIVLRTLGFSAVPLH 285
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS+RLGAL KFK+G IL+ TDVASRGLDIPSVD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 286 GQLSQSQRLGALAKFKSGGRKILVATDVASRGLDIPSVDIVINFDIPTHSKDYIHRVGRT 345
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+LV QY++E +IE +I KK+ +P E+EE+ LL ERV EA RI+ +
Sbjct: 346 ARAGRSGKSITLVTQYDVELVQRIESVIEKKMELWPTEKEEIALLTERVNEAGRIAANEL 405
Query: 369 KDSGNKRRRKGG 380
K+ +K RK G
Sbjct: 406 KEQDSKGGRKRG 417
>gi|346978651|gb|EGY22103.1| ATP-dependent rRNA helicase rrp-3 [Verticillium dahliae VdLs.17]
Length = 486
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/373 (59%), Positives = 284/373 (76%), Gaps = 7/373 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKT AFALP+LQALLE FA V++PTRELA QI++ FEA
Sbjct: 98 GRDVIGLAETGSGKTAAFALPVLQALLEKPSG------LFAVVMAPTRELAAQIAQTFEA 151
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I+LRCAV+VGG+DM+QQ +ALGK+PH+VVATPGRL+DHL TKGFSL +LKYLVLD
Sbjct: 152 LGSLINLRCAVIVGGLDMVQQAIALGKKPHVVVATPGRLLDHLEKTKGFSLRSLKYLVLD 211
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK-YS 187
EADRLL+ DF S+D+IL IPR R TYLFSATM+ KV+ LQRA LK+P ++ S Y
Sbjct: 212 EADRLLDMDFGPSIDKILKFIPRERHTYLFSATMSSKVESLQRASLKDPARVSVQSNGYQ 271
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
V TL Q Y F+P KD Y V+++ +T+VF RT T+ LA++LR LG A+P+
Sbjct: 272 VVSTLLQNYLFIPHALKDVYCVHLINSFIGQTTIVFLRTVHDTQRLAILLRTLGFSALPL 331
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGALNKF+AG +IL+ TDVA+RGLDIP+VD+VINYD+P +SK YIHRVGR
Sbjct: 332 HGQLSQSARLGALNKFRAGSRDILVATDVAARGLDIPNVDVVINYDLPQDSKTYIHRVGR 391
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G A+SLV QY+LE +L+IE +GKKL EFP E++EV++ RV EA+R +++
Sbjct: 392 TARAGKSGRALSLVTQYDLEIWLRIEASMGKKLDEFPTEKDEVMVFQARVEEAQRHARIE 451
Query: 368 IKDSGNKRRRKGG 380
+K R +KG
Sbjct: 452 MKHLMENRGKKGA 464
>gi|342877843|gb|EGU79271.1| hypothetical protein FOXB_10221 [Fusarium oxysporum Fo5176]
Length = 485
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/372 (58%), Positives = 289/372 (77%), Gaps = 7/372 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKT AFALP+LQALL+ + F VL+PTRELA QI + FEA
Sbjct: 97 GRDIIGLAETGSGKTAAFALPVLQALLDKPQ------PLFGLVLAPTRELATQIGQAFEA 150
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS ISLRCAV+VGG+DM+ Q +ALGK+PHI+VATPGRL+DHL TKGFSL TLKYL++D
Sbjct: 151 LGSLISLRCAVIVGGLDMVPQAIALGKKPHIIVATPGRLVDHLEKTKGFSLRTLKYLIMD 210
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF S+D+IL IPR R+TYLFSAT++ K++ LQRA L++PV++ +S KY
Sbjct: 211 EADRLLDMDFGPSIDKILKFIPRERRTYLFSATISSKIESLQRASLRDPVRVSISSNKYQ 270
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P KD YL+Y++ E ST++FTRT T+ ++++LR LG AIP+
Sbjct: 271 TVSTLLQHYIFIPHVRKDVYLIYLINEHVGKSTIIFTRTVWETQRISILLRTLGFGAIPL 330
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQ+ RLGALNKF++G +IL+ TDVA+RGLDIPSVD+V+NYD+P +SK YIHRVGR
Sbjct: 331 HGQLSQTSRLGALNKFRSGTRDILVATDVAARGLDIPSVDVVLNYDLPQDSKTYIHRVGR 390
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G+AIS+V QY++E + +IE +GKKL E+P E+EEV RV EA+R +++
Sbjct: 391 TARAGKSGIAISVVTQYDVEIFTRIEAALGKKLTEYPTEKEEVFTFQTRVEEAQRHARVE 450
Query: 368 IKDSGNKRRRKG 379
+K +R +KG
Sbjct: 451 MKSFTEERGKKG 462
>gi|449547391|gb|EMD38359.1| hypothetical protein CERSUDRAFT_49063 [Ceriporiopsis subvermispora
B]
Length = 447
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/401 (57%), Positives = 293/401 (73%), Gaps = 16/401 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+A TGSGKT AFALPILQ L E + FACV++PTRELA QIS+QFE+
Sbjct: 50 GRDIIGVAATGSGKTAAFALPILQKLWEEPKG------LFACVMAPTRELAYQISQQFES 103
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I +RCA +VGG+ +M Q +AL KRPHIVVATPGRL DHL NTKGFSL LK+LV+D
Sbjct: 104 LGSAIGVRCATIVGGMPIMDQAVALAKRPHIVVATPGRLNDHLENTKGFSLRGLKFLVMD 163
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +D+IL VIP+ R TYLFSATMT KV KLQRA L NPV++E + KYST
Sbjct: 164 EADRLLDMDFGPIIDKILKVIPKERTTYLFSATMTTKVAKLQRASLSNPVRVEVSEKYST 223
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y F+P KD +L+Y+ ++ +S ++FTRT + L+++LR LG A+P+
Sbjct: 224 VSTLLQYYLFIPLVQKDVHLIYLANSLAQNSIIIFTRTVHDAQRLSIILRTLGFPAVPLH 283
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS RLGAL KFK+G +L+ TDVASRGLDIPSVD+VINYDIPT+SKDYIHRVGRT
Sbjct: 284 GQLSQSARLGALGKFKSGGRKVLVATDVASRGLDIPSVDVVINYDIPTHSKDYIHRVGRT 343
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +++LV QY++E +IE IGKK+ +P + EE+ LL ERV EA R++ +
Sbjct: 344 ARAGRSGKSVTLVTQYDVELVQRIEATIGKKMELWPTDAEEIALLRERVDEAGRVAVTEL 403
Query: 369 KDS------GNKRRRKGGDEDDDIGR----QFGINKKKLSK 399
K+ G KRRR+ G +DD + GI KK SK
Sbjct: 404 KEQGINGGHGRKRRREEGGKDDRDRDDDVVEAGIPSKKKSK 444
>gi|119186961|ref|XP_001244087.1| hypothetical protein CIMG_03528 [Coccidioides immitis RS]
gi|118595828|sp|Q1E1N5.1|RRP3_COCIM RecName: Full=ATP-dependent rRNA helicase RRP3
gi|392870806|gb|EAS32639.2| ATP-dependent rRNA helicase RRP3 [Coccidioides immitis RS]
Length = 474
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/373 (59%), Positives = 290/373 (77%), Gaps = 7/373 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQAL++ + + F VL+PTRELA QIS+QFEA
Sbjct: 85 GRDLIGLAETGSGKTAAFALPILQALMDKPQ------SMFGLVLAPTRELAYQISQQFEA 138
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS IS+RCAV+VGG+DM+ Q +ALGK+PHI+VATPGRL+DHL NTKGFSL +LKYLV+D
Sbjct: 139 LGSLISVRCAVIVGGMDMVSQAIALGKKPHIIVATPGRLLDHLENTKGFSLRSLKYLVMD 198
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF LD+IL V+P+ R+TYLFSATM+ KV+ LQRA L NP+++ +S KY
Sbjct: 199 EADRLLDLDFGPILDKILKVLPKERRTYLFSATMSSKVESLQRASLSNPLRVSVSSNKYQ 258
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q +P K+KD YL+Y+L E S ++FTRT + T+ LA++LR LG AIP+
Sbjct: 259 TVSTLLQNCLIIPHKHKDIYLIYLLNEFPGQSVIIFTRTVNETQRLAILLRALGFGAIPL 318
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL KF++ NIL+ TDVA+RGLDIPSVD+V+NYD+P++SK YIHRVGR
Sbjct: 319 HGQLSQSARLGALGKFRSRSRNILVATDVAARGLDIPSVDLVLNYDLPSDSKTYIHRVGR 378
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G A SLV QY++E + +IE +GK+L E+ E+EEV++L +RV EA+R +
Sbjct: 379 TARAGKSGRAFSLVTQYDVEIWQRIEAALGKELDEYKVEKEEVMVLSDRVGEAQRHAITE 438
Query: 368 IKDSGNKRRRKGG 380
+K+ R +KG
Sbjct: 439 MKELHENRGKKGA 451
>gi|303317380|ref|XP_003068692.1| ATP-dependent rRNA helicase RRP3, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108373|gb|EER26547.1| ATP-dependent rRNA helicase RRP3, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 474
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/373 (59%), Positives = 290/373 (77%), Gaps = 7/373 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQAL++ + + F VL+PTRELA QIS+QFEA
Sbjct: 85 GRDLIGLAETGSGKTAAFALPILQALMDKPQ------SMFGLVLAPTRELAYQISQQFEA 138
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS IS+RCAV+VGG+DM+ Q +ALGK+PHI+VATPGRL+DHL NTKGFSL +LKYLV+D
Sbjct: 139 LGSLISVRCAVIVGGMDMVSQAIALGKKPHIIVATPGRLLDHLENTKGFSLRSLKYLVMD 198
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF LD+IL V+P+ R+TYLFSATM+ KV+ LQRA L NP+++ +S KY
Sbjct: 199 EADRLLDLDFGPILDKILKVLPKERRTYLFSATMSSKVESLQRASLSNPLRVSVSSNKYQ 258
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q +P K+KD YL+Y+L E S ++FTRT + T+ LA++LR LG AIP+
Sbjct: 259 TVSTLLQNCLIIPHKHKDIYLIYLLNEFPGQSVIIFTRTVNETQRLAILLRALGFGAIPL 318
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL KF++ NIL+ TDVA+RGLDIPSVD+V+NYD+P++SK YIHRVGR
Sbjct: 319 HGQLSQSARLGALGKFRSRSRNILVATDVAARGLDIPSVDLVLNYDLPSDSKTYIHRVGR 378
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G A SLV QY++E + +IE +GK+L E+ E+EEV++L +RV EA+R +
Sbjct: 379 TARAGKSGRAFSLVTQYDVEIWQRIEAALGKELDEYKVEKEEVMVLSDRVGEAQRHAITE 438
Query: 368 IKDSGNKRRRKGG 380
+K+ R +KG
Sbjct: 439 MKELHENRGKKGA 451
>gi|443917623|gb|ELU38297.1| ATP-dependent rRNA helicase RRP3 [Rhizoctonia solani AG-1 IA]
Length = 1028
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/363 (61%), Positives = 284/363 (78%), Gaps = 8/363 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IG+A+TGSGKT AFALPILQ L + FACVL+PTRELA QI++QFEA
Sbjct: 133 GKDVIGVAETGSGKTAAFALPILQKLWDEPR------GLFACVLAPTRELAYQIAQQFEA 186
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I +RCA +VGG+DMM Q++ALGK PHI+VATPGRL DHL NTKGFSL L+YLVLD
Sbjct: 187 LGSAIGVRCATIVGGMDMMSQSIALGK-PHIIVATPGRLNDHLENTKGFSLRGLRYLVLD 245
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +D+IL V+PR R T+LFSATM+ KV KLQRA L+NPV++E KYST
Sbjct: 246 EADRLLDMDFGPVIDKILKVLPRERNTFLFSATMSTKVAKLQRASLQNPVRVEVNGKYST 305
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y P KD +LV++ E++A+S ++FTRT + L+++LRNLG A+P+
Sbjct: 306 VSTLLQYYLLTPFANKDVHLVHLANELAANSIIIFTRTVHDAQRLSMVLRNLGFPAVPLH 365
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS RLGALNKFKAG ++LI TDVAS GLDIP+VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 366 GQLSQSARLGALNKFKAGGRSLLIATDVAS-GLDIPTVDVVINFDIPTHSKDYIHRVGRT 424
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR G +I+LV QY++E +IE +IGKK+ EFP ++ EV+LL ERV EA+R++ +
Sbjct: 425 ARAGRAGKSITLVTQYDVELLQRIEGVIGKKMMEFPIDKAEVMLLKERVGEAQRLAVQEL 484
Query: 369 KDS 371
K+S
Sbjct: 485 KES 487
>gi|358386646|gb|EHK24241.1| hypothetical protein TRIVIDRAFT_31450 [Trichoderma virens Gv29-8]
Length = 479
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/362 (60%), Positives = 283/362 (78%), Gaps = 7/362 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKT AFALPILQALLE + F VL+PTRELA QI + FEA
Sbjct: 93 GRDVIGLAETGSGKTAAFALPILQALLEKPQ------PLFGLVLAPTRELAAQIGQSFEA 146
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ ISLRCAV+VGG+DM+ Q +ALGK+PHI+VATPGRL+DHL TKGFSL +LKYLV+D
Sbjct: 147 LGALISLRCAVIVGGLDMVPQAIALGKKPHIIVATPGRLVDHLEKTKGFSLRSLKYLVMD 206
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYS 187
EADRLL+ DF S+D+IL IPR R+TYLFSAT++ KV+ LQRA L++PV++ ++SKY
Sbjct: 207 EADRLLDMDFGPSIDKILKFIPRERRTYLFSATLSSKVESLQRASLRDPVRVSVSSSKYQ 266
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y FVP K KD YL+Y++ E + S ++FTRT T+ +A++LR LG AIP+
Sbjct: 267 TVSTLLQHYIFVPHKRKDTYLIYLVNEFAGKSIIIFTRTVFETQRIAILLRTLGFGAIPL 326
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGALNKFK G IL+ TDVA+RGLDIP+VD+V+N D+P +SK YIHRVGR
Sbjct: 327 HGQLSQSSRLGALNKFKGGSREILVATDVAARGLDIPAVDVVLNLDLPQDSKTYIHRVGR 386
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G+AIS+V QY++E Y +IE +GK+L +P E+EEV+ RV EA+R +++
Sbjct: 387 TARAGKSGIAISIVTQYDVEIYQRIEAALGKQLETYPTEKEEVMAFQSRVEEAQRETRVE 446
Query: 368 IK 369
+K
Sbjct: 447 MK 448
>gi|389748758|gb|EIM89935.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 452
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/362 (60%), Positives = 284/362 (78%), Gaps = 6/362 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+A TGSGKT AFALPI+QAL + FACV++PTRELA QIS+QFEA
Sbjct: 52 GRDIIGVASTGSGKTAAFALPIIQALWNDPK------GLFACVIAPTRELAYQISQQFEA 105
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI +RCAV++GG+D++ Q++AL K+PHI+VATPGRL HL NTKGFSL LK+ VLD
Sbjct: 106 LGSGIGVRCAVIIGGMDVVSQSIALAKKPHIIVATPGRLNYHLENTKGFSLRGLKFFVLD 165
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +D+IL VIP+ R TYLFSATMT KV KLQRA L+NPV++E +SKYST
Sbjct: 166 EADRLLDMDFGPDIDKILKVIPKERTTYLFSATMTTKVAKLQRASLQNPVRVEVSSKYST 225
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y F+P +K+ +LV + ++ +S M+FTRT + L+++LR LG A+P+
Sbjct: 226 VSTLLQYYLFMPLSHKEVHLVNLANTLAQNSMMIFTRTVHDAQKLSIILRTLGFPAVPLH 285
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS+RLGAL+KFK+G +IL+ TDVASRGLDIPSVD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 286 GQLSQSQRLGALSKFKSGGRSILVATDVASRGLDIPSVDVVINFDIPTHSKDYIHRVGRT 345
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR G +I+LV QY++E +IEK+ GKK+ +P +++E+ LL ERV EA R++ +
Sbjct: 346 ARAGRAGKSITLVTQYDIELIHRIEKVTGKKMDLWPTDKDEIALLRERVEEASRLAVNEM 405
Query: 369 KD 370
KD
Sbjct: 406 KD 407
>gi|310801624|gb|EFQ36517.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 480
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/373 (58%), Positives = 291/373 (78%), Gaps = 7/373 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
A +D+IGLA+TGSGKT AFALP++QALLE + AFF VL+PTRELA QI +QFE
Sbjct: 88 ANRDIIGLAETGSGKTAAFALPVIQALLEKPQ------AFFGLVLAPTRELAAQIGQQFE 141
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
ALGS ISLR AV+VGG+DM+ Q +ALGK+PH++VATPGRL+DHL TKGFSL +LKYLV+
Sbjct: 142 ALGSLISLRTAVIVGGLDMVAQAIALGKKPHVIVATPGRLVDHLEKTKGFSLRSLKYLVM 201
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KY 186
DEADRLL+ DF S+D+IL IPR R+T+LFSATM+ K++ LQRA L++PV++ +S KY
Sbjct: 202 DEADRLLDMDFGPSIDKILKFIPRERRTFLFSATMSSKIESLQRASLRDPVRVSISSNKY 261
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
TV TL Q Y F+P + KD YLVY+ E + +VFTRT T+ LA++LR LG AIP
Sbjct: 262 QTVSTLLQYYLFIPHQLKDTYLVYLANEFAGKKLVVFTRTVSETQRLAILLRTLGFGAIP 321
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
+ G ++Q+ RLGALNKF+AGE +IL+ TDVA+RGLDIP VD+VIN+D+ +SK ++HR+G
Sbjct: 322 LHGQLNQTARLGALNKFRAGERSILVATDVAARGLDIPLVDVVINHDLAQDSKTHVHRIG 381
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQM 366
RTARAG++G+A+SLV QY+LE +L+IE +GKK E+P ++EEV++ RV EA+R ++M
Sbjct: 382 RTARAGKSGIALSLVTQYDLEIWLRIEAALGKKQDEYPTQKEEVMVFQSRVEEAQRHARM 441
Query: 367 TIKDSGNKRRRKG 379
+K+ + +KG
Sbjct: 442 EMKNLMETKGKKG 454
>gi|320038649|gb|EFW20584.1| ATP-dependent rRNA helicase RRP3 [Coccidioides posadasii str.
Silveira]
Length = 474
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/373 (59%), Positives = 289/373 (77%), Gaps = 7/373 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQAL++ + + F VL+PTRELA QIS+QFEA
Sbjct: 85 GRDLIGLAETGSGKTAAFALPILQALMDKPQ------SMFGLVLAPTRELAYQISQQFEA 138
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS IS+RCAV+VGG+DM+ Q +ALGK+PHI+VATPGRL+DHL NTKGFSL +LKYLV+D
Sbjct: 139 LGSLISVRCAVIVGGMDMVSQAIALGKKPHIIVATPGRLLDHLENTKGFSLRSLKYLVMD 198
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF LD+IL V+P+ R+TYLFSATM+ KV+ LQRA L NP+++ +S KY
Sbjct: 199 EADRLLDLDFGPILDKILKVLPKERRTYLFSATMSSKVESLQRASLSNPLRVSVSSNKYQ 258
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q +P K+KD YL+Y+L E S +VFTRT + T+ LA +LR LG AIP+
Sbjct: 259 TVSTLLQNCLIIPHKHKDIYLIYLLNEFPGQSVIVFTRTVNETQRLANLLRALGFGAIPL 318
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL KF++ NIL+ TDVA+RGLDIPSVD+V+NYD+P++SK YIHRVGR
Sbjct: 319 HGQLSQSARLGALGKFRSRSRNILVATDVAARGLDIPSVDLVLNYDLPSDSKTYIHRVGR 378
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G A SLV QY++E + +IE +GK+L E+ E+EEV++L +RV EA+R +
Sbjct: 379 TARAGKSGRAFSLVTQYDVEIWQRIEAALGKELDEYKVEKEEVMVLSDRVGEAQRHAITE 438
Query: 368 IKDSGNKRRRKGG 380
+K+ R +KG
Sbjct: 439 MKELHENRGKKGA 451
>gi|346318712|gb|EGX88314.1| ATP-dependent rRNA helicase RRP3 [Cordyceps militaris CM01]
Length = 480
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/389 (58%), Positives = 294/389 (75%), Gaps = 15/389 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKT AFALP+LQALL+ + F VL+PTRELA QI + FEA
Sbjct: 95 GRDVIGLAETGSGKTAAFALPVLQALLDKPQ------PLFGLVLAPTRELAAQIGQTFEA 148
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ ISLRCAV+VGG+DM+ Q +ALGK+PH++VATPGRL+DHL TKGFSL TLKYLVLD
Sbjct: 149 LGALISLRCAVIVGGLDMVPQAVALGKKPHVIVATPGRLVDHLEKTKGFSLRTLKYLVLD 208
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYS 187
EADRLL+ DF +S++++L IPR R+TYLFSATM+ V+ LQRA L++PV++ +ASKY
Sbjct: 209 EADRLLDMDFGESIEKLLKFIPRERRTYLFSATMSSSVESLQRASLRDPVRVSVSASKYQ 268
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TLKQ Y F+P K KD YL++I+ E + S +VFTRT T+ A++LR LG AIP+
Sbjct: 269 TVSTLKQHYVFIPHKRKDTYLIHIINEFAGKSCIVFTRTVYETQRCAVLLRTLGFGAIPL 328
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGALNKF+ G IL+ TDVA+RGLDIP VD+++NYDIP++SK YIHRVGR
Sbjct: 329 HGQLSQSARLGALNKFRGGTREILVATDVAARGLDIPKVDVILNYDIPSDSKTYIHRVGR 388
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ-- 365
TARAG++GVAIS+V Q+++E + +IE +GKKL EF +EEEV+ RV EA+R ++
Sbjct: 389 TARAGKSGVAISIVTQFDIELFTRIEAALGKKLDEFDTKEEEVMTFQSRVQEAQRHARNE 448
Query: 366 -MTIKDSGNK--RRRKGGDED---DDIGR 388
I +S NK RKG D DD+ R
Sbjct: 449 MNNIMESRNKGATMRKGRDNKRRRDDMDR 477
>gi|403412636|emb|CCL99336.1| predicted protein [Fibroporia radiculosa]
Length = 974
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/376 (59%), Positives = 282/376 (75%), Gaps = 12/376 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+A TGSGKT AFALPILQ L E + FACVL+PTRELA QIS+QFE
Sbjct: 574 GRDIIGVASTGSGKTAAFALPILQKLWEEPK------GLFACVLAPTRELAYQISQQFEG 627
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +RC +VGG+DMM Q++AL KRPHIVVATPGRL+DHL NTKGFSL LK+LVLD
Sbjct: 628 LGSAMGVRCVTIVGGLDMMAQSVALAKRPHIVVATPGRLIDHLENTKGFSLRGLKFLVLD 687
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +D+IL +IP+ R TYLFSATMT KV KLQRA L NPV++E + KYST
Sbjct: 688 EADRLLDMDFGPIIDKILKIIPKERTTYLFSATMTTKVAKLQRASLSNPVRVEVSEKYST 747
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y F+P KD +L+Y+ ++ +S ++FTRT + L+++LR LG A+P+
Sbjct: 748 VSTLLQYYLFIPLVQKDVHLIYLANTLAQNSIIIFTRTVHDAQRLSIILRTLGFPAVPLH 807
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS RLGAL KFK+G IL+ TDVASRGLDIP VD+VINYDIPT+SKDYIHRVGRT
Sbjct: 808 GQLSQSARLGALGKFKSGGRKILVATDVASRGLDIPHVDVVINYDIPTHSKDYIHRVGRT 867
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRIS---- 364
ARAGR+G +++LV QY++E +IE IGKK+ +P + EE+ LL ERV EA R++
Sbjct: 868 ARAGRSGKSVTLVTQYDVELIQRIETTIGKKMELWPTDAEEIALLRERVDEASRVAINEL 927
Query: 365 --QMTIKDSGNKRRRK 378
Q +K S + R+R+
Sbjct: 928 KEQAGMKKSVHGRKRR 943
>gi|380492419|emb|CCF34618.1| ATP-dependent rRNA helicase RRP3 [Colletotrichum higginsianum]
Length = 481
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/364 (57%), Positives = 289/364 (79%), Gaps = 7/364 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
A +D+IGLA+TGSGKT AFALP++QALLE + AFF VL+PTRELA QI +QFE
Sbjct: 88 ANRDIIGLAETGSGKTAAFALPVIQALLEKPQ------AFFGLVLAPTRELAAQIGQQFE 141
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
ALGS ISLR AV+VGG+DM+ Q +ALGK+PH+++ATPGRL+DHL TKGFSL +LKYLV+
Sbjct: 142 ALGSLISLRTAVIVGGLDMVAQAIALGKKPHVIIATPGRLVDHLEKTKGFSLRSLKYLVM 201
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KY 186
DEADRLL+ DF S+D+IL +PR R+T+LFSATM+ K++ LQRA L++PV++ +S KY
Sbjct: 202 DEADRLLDMDFGPSIDKILKFVPRERRTFLFSATMSSKIESLQRASLRDPVRVSISSNKY 261
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
TV TL Q Y F+P KD +L+Y+L E + M+FTRT T+ LA++LR+LG AIP
Sbjct: 262 QTVSTLLQYYLFIPHTQKDVHLIYLLNEHAGKKIMIFTRTVAETQRLAILLRSLGFGAIP 321
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
+ G ++Q+ RLGALNKF+ G +IL+ TDVA+RGLD+P+VD+V+N+D+P +SK +IHR+G
Sbjct: 322 LHGQLNQTARLGALNKFRTGTRSILVATDVAARGLDVPAVDVVVNHDLPQDSKTFIHRIG 381
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQM 366
RTARAG++G+A+SLV QY+LE +L+IE +GKKL E+P +++EV++ RV EA+R ++M
Sbjct: 382 RTARAGKSGIALSLVTQYDLEIFLRIEAALGKKLDEYPTQKDEVMVFQNRVEEAQRHARM 441
Query: 367 TIKD 370
+K+
Sbjct: 442 EMKN 445
>gi|350630756|gb|EHA19128.1| hypothetical protein ASPNIDRAFT_54204 [Aspergillus niger ATCC 1015]
Length = 467
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/372 (58%), Positives = 288/372 (77%), Gaps = 7/372 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQAL+E + FF VL+PTRELA QIS+ FE+
Sbjct: 85 GRDLIGLAETGSGKTAAFALPILQALMEKPQ------PFFGLVLAPTRELAYQISKSFES 138
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ + +R V+VGG+DM+ Q+++LGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+D
Sbjct: 139 LGASMGVRSCVIVGGMDMVSQSISLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMD 198
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAA-SKYS 187
EADRLL+ DF LD+IL V+PR R+T+LFSATM+ KV+ LQRA L NP+++ + SKY
Sbjct: 199 EADRLLDMDFGPLLDKILKVLPRERRTFLFSATMSSKVESLQRASLSNPLRVSVSTSKYQ 258
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P K+KD YLVY+L E + ST++FTRT + T+ LA +LR LG AIP+
Sbjct: 259 TVSTLLQSYLFIPQKHKDLYLVYLLNEFAGQSTIIFTRTVNETQRLAFLLRALGFGAIPL 318
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL KF+A NIL+ TDVA+RGLDIPSVD+V+N+D+P +S Y+HRVGR
Sbjct: 319 HGQLSQSARLGALGKFRARSRNILVATDVAARGLDIPSVDVVLNFDLPGDSPSYVHRVGR 378
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G+AIS V QY++E +L+IE +GKKL E+ ++EV++L E V EA+R + M
Sbjct: 379 TARAGKSGLAISFVAQYDVEVWLRIEGALGKKLKEYDCPKDEVMVLGENVAEAQRQAIMD 438
Query: 368 IKDSGNKRRRKG 379
+KD K+ +G
Sbjct: 439 MKDYNEKKGSRG 450
>gi|358399923|gb|EHK49260.1| hypothetical protein TRIATDRAFT_143973 [Trichoderma atroviride IMI
206040]
Length = 479
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/393 (56%), Positives = 288/393 (73%), Gaps = 23/393 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKT AFALPILQALLE + FF VL+PTRELA QI + FEA
Sbjct: 92 GRDVIGLAETGSGKTAAFALPILQALLEKPQ------PFFGLVLAPTRELAAQIGQSFEA 145
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ ISLRCAV+VGG+DM+ Q +ALGK+PHI+VATPGRL+DHL TKGFSL +LKYLV+D
Sbjct: 146 LGALISLRCAVIVGGLDMVPQAIALGKKPHIIVATPGRLVDHLEKTKGFSLRSLKYLVMD 205
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF S+D+IL IPR R+TYLFSATM+ KV+ LQRA L++P ++ +S KY
Sbjct: 206 EADRLLDMDFGPSIDKILKFIPRERRTYLFSATMSSKVESLQRASLRDPARVSVSSNKYQ 265
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P K KD YL+Y++ E + S ++FTRT + +A++LR LG AIP+
Sbjct: 266 TVSTLLQHYVFIPHKRKDTYLIYLVNEFAGKSIIIFTRTVFEAQRVAILLRTLGFGAIPL 325
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGALNKFK G IL+ TDVA+RGLDIP+VD+V+N+D+P +SK YIHRVGR
Sbjct: 326 HGQLSQSARLGALNKFKGGSREILVATDVAARGLDIPAVDVVLNHDLPQDSKTYIHRVGR 385
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G+AIS+ QY+LE Y +IE +GK+L ++P E EEV+ RV EA R +
Sbjct: 386 TARAGKSGIAISIATQYDLEIYQRIEAALGKELDQYPTEREEVMAFQSRVDEALRTVRGE 445
Query: 368 IK----------------DSGNKRRRKGGDEDD 384
+K +G KRRR D+++
Sbjct: 446 MKAFLENKGKGKGKDRGKTAGPKRRRDNMDQEE 478
>gi|145255454|ref|XP_001398969.1| ATP-dependent rRNA helicase RRP3 [Aspergillus niger CBS 513.88]
gi|143462251|sp|A2RB17.1|RRP3_ASPNC RecName: Full=ATP-dependent rRNA helicase rrp3
gi|134084560|emb|CAK43313.1| unnamed protein product [Aspergillus niger]
Length = 467
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/372 (58%), Positives = 288/372 (77%), Gaps = 7/372 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQAL+E + FF VL+PTRELA QIS+ FE+
Sbjct: 85 GRDLIGLAETGSGKTAAFALPILQALMEKPQ------PFFGLVLAPTRELAYQISKSFES 138
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ + +R V+VGG+DM+ Q+++LGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+D
Sbjct: 139 LGASMGVRSCVIVGGMDMVSQSISLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMD 198
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAA-SKYS 187
EADRLL+ DF LD+IL V+PR R+T+LFSATM+ KV+ LQRA L NP+++ + SKY
Sbjct: 199 EADRLLDMDFGPLLDKILKVLPRERRTFLFSATMSSKVESLQRASLSNPLRVSVSTSKYQ 258
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P K+KD YLVY+L E + ST++FTRT + T+ LA +LR LG AIP+
Sbjct: 259 TVSTLLQSYLFIPQKHKDLYLVYLLNEFAGQSTIIFTRTVNETQRLAFLLRALGFGAIPL 318
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL KF+A NIL+ TDVA+RGLDIPSVD+V+N+D+P +S Y+HRVGR
Sbjct: 319 HGQLSQSARLGALGKFRARSRNILVATDVAARGLDIPSVDVVLNFDLPGDSPSYVHRVGR 378
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G+AIS V QY++E +L+IE +GKKL E+ ++EV++L E V EA+R + M
Sbjct: 379 TARAGKSGLAISFVAQYDVEVWLRIEGALGKKLKEYDCPKDEVMVLGENVAEAQRQAIMD 438
Query: 368 IKDSGNKRRRKG 379
+KD K+ +G
Sbjct: 439 MKDYNEKKGSRG 450
>gi|393220360|gb|EJD05846.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 450
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/378 (59%), Positives = 287/378 (75%), Gaps = 8/378 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+G+D+IG+A+TGSGKT AFALPILQ L E + FACVL+PTRELA QIS+QFE
Sbjct: 51 SGRDIIGVAETGSGKTVAFALPILQRLWEEPK------GLFACVLAPTRELAYQISQQFE 104
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
+LGS I +RCAV+VGG++M+ Q +AL KRPHIVVATPGRL DHL NTKGFSL +K+LVL
Sbjct: 105 SLGSAIGVRCAVIVGGMNMVDQAVALAKRPHIVVATPGRLNDHLENTKGFSLRGIKFLVL 164
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADRLL+ DF +D+IL VIP+ R TYLFSATMT KV KLQRA L NPV++E + KY+
Sbjct: 165 DEADRLLDMDFGPIIDKILKVIPKERTTYLFSATMTTKVAKLQRASLTNPVRVEVSKKYT 224
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P K K+ L+++ +S +S ++FTRT + LAL+L+ LG ++P+
Sbjct: 225 TVSTLLQYYLFIPYKQKEVNLIHMCNTLSQNSIIIFTRTVMDCQRLALILKTLGFSSVPL 284
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL KFK+G NIL+ TD+ASRGLDIPSVD VINYDIP++SKDYIHRVGR
Sbjct: 285 HGQLSQSARLGALAKFKSGGRNILVATDIASRGLDIPSVDAVINYDIPSHSKDYIHRVGR 344
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAGR G +I+LV QY++E +IE +IGKK+ +P + EE+ LL ERV EA R++
Sbjct: 345 TARAGRAGNSITLVTQYDVELIQRIEAVIGKKMDLWPTDAEEIALLRERVDEAARMAAKE 404
Query: 368 IKDSGNKRR--RKGGDED 383
+K+ + R RK G ED
Sbjct: 405 LKEQAKEGRHGRKRGRED 422
>gi|392595723|gb|EIW85046.1| DEAD-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 465
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/391 (57%), Positives = 289/391 (73%), Gaps = 27/391 (6%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+A+TGSGKT AFALPILQ L E + FAC+L+PTRELA QIS+QFE+
Sbjct: 52 GRDIIGVAETGSGKTAAFALPILQKLWEEPK------GLFACILAPTRELAYQISQQFES 105
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +RC VLVGGVD M Q +AL KRPHI+VATPGRL DHL NTKGFSL +LK+LVLD
Sbjct: 106 LGSAMGVRCLVLVGGVDRMPQAVALAKRPHIIVATPGRLNDHLQNTKGFSLRSLKFLVLD 165
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +D+IL VIP+ R TYLFSATMT KV KLQRA L NPV++E +SKY T
Sbjct: 166 EADRLLDMDFGPDIDQILKVIPKERTTYLFSATMTTKVAKLQRASLSNPVRVEVSSKYQT 225
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y F+P KD +LVY++ ++++S ++FTRT + L+++LR LG A+P+
Sbjct: 226 VSTLLQYYLFIPLAQKDVHLVYLVNSLASNSIILFTRTVHDAQRLSIVLRTLGFPAVPLH 285
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVAS----------------RGLDIPSVDMVINY 292
G +SQS+RLGAL KFK+G NIL+ TDVAS RGLD+PSVD+VIN+
Sbjct: 286 GQLSQSQRLGALGKFKSGGRNILVATDVASRHVLHSGFMGPTDHHYRGLDLPSVDVVINF 345
Query: 293 DIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL 352
DIP++SKDYIHRVGRTARAGR+G ++++V QY++E +IE +I KK+ +P +EEEV L
Sbjct: 346 DIPSHSKDYIHRVGRTARAGRSGKSVTIVTQYDVELIQRIETVIAKKMELWPTDEEEVAL 405
Query: 353 LLERVTEAKRISQMTIKD-----SGNKRRRK 378
L ERV EA R++ +K+ G KRRR+
Sbjct: 406 LRERVEEAGRVAINELKEEARFNEGRKRRRE 436
>gi|340522166|gb|EGR52399.1| predicted protein [Trichoderma reesei QM6a]
Length = 482
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/393 (56%), Positives = 292/393 (74%), Gaps = 23/393 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKT AFALPILQALLE + F VL+PTRELA QI + FEA
Sbjct: 95 GRDVIGLAETGSGKTAAFALPILQALLEKPQ------PLFGLVLAPTRELAAQIGQSFEA 148
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ ISLRCAV+VGG+DM+ Q +ALGK+PHI+VATPGRL+DHL TKGFSL +LKYLV+D
Sbjct: 149 LGALISLRCAVIVGGLDMVPQAIALGKKPHIIVATPGRLVDHLEKTKGFSLRSLKYLVMD 208
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYS 187
EADRLL+ DF S+D+IL IPR R+TYLFSAT++ KV+ LQRA L++PV++ ++SKY
Sbjct: 209 EADRLLDMDFGPSIDKILKFIPRERRTYLFSATLSSKVESLQRASLRDPVRVSVSSSKYQ 268
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y VP K KD YL+Y++ E + S ++FTRT T+ +A++LR LG AIP+
Sbjct: 269 TVSTLLQHYILVPHKRKDTYLIYLVNEFAGKSIIIFTRTVFETQRIAILLRTLGFGAIPL 328
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGALNKFK G IL+ TDVA+RGLDIP+VD+V+N D+P +SK YIHRVGR
Sbjct: 329 HGQLSQSSRLGALNKFKGGSREILVATDVAARGLDIPAVDVVLNLDLPQDSKTYIHRVGR 388
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G+AI++V QY++E Y +IE +GKKL +P E+EEV+ RV EA+R +++
Sbjct: 389 TARAGKSGIAINIVTQYDVEIYQRIEAALGKKLDAYPTEKEEVMAFQSRVEEAQREARIE 448
Query: 368 IK----------------DSGNKRRRKGGDEDD 384
+K G+KRRR DE++
Sbjct: 449 MKAFLENKGKGKGKGKAKAGGSKRRRDNMDEEE 481
>gi|116195380|ref|XP_001223502.1| hypothetical protein CHGG_04288 [Chaetomium globosum CBS 148.51]
gi|118595827|sp|Q2H1Q8.1|RRP3_CHAGB RecName: Full=ATP-dependent rRNA helicase RRP3
gi|88180201|gb|EAQ87669.1| hypothetical protein CHGG_04288 [Chaetomium globosum CBS 148.51]
Length = 493
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/383 (57%), Positives = 293/383 (76%), Gaps = 7/383 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IGLA+TGSGKTGAFALPILQALL+ + FA VL+PTRELA QI++ FEAL
Sbjct: 103 RDIIGLAETGSGKTGAFALPILQALLDKPQ------PLFALVLAPTRELAAQIAQSFEAL 156
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GS ISLRCA+++GG+DM+QQ +ALGK+PH+VVATPGRL+DHL TKGFSL L+YLV+DE
Sbjct: 157 GSLISLRCALILGGLDMVQQAIALGKKPHVVVATPGRLLDHLEKTKGFSLRNLRYLVMDE 216
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYST 188
ADRLL+ DF LD+IL +PR R+T+LFSATM+ KV+ LQRACL++P+K+ ++SKY T
Sbjct: 217 ADRLLDMDFGPILDKILKFLPRERRTFLFSATMSSKVESLQRACLRDPLKVSISSSKYQT 276
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y F+P +KD YL+Y+ E + + ++FTRT T+ +A++LR LG AIP+
Sbjct: 277 VSTLVQNYVFIPHTHKDTYLIYLCNEFAGQTIIIFTRTVIETQRIAILLRTLGMGAIPLH 336
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS RLGALNKF+AG +IL+ TDVA+RGLDIP+VD V+N D+P +SK Y+HRVGRT
Sbjct: 337 GGLSQSARLGALNKFRAGSRDILVATDVAARGLDIPNVDCVLNLDLPGDSKTYVHRVGRT 396
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AIS V QY+LE +L+IE +G KL E+ E+++V++ RV EA+RI++ I
Sbjct: 397 ARAGRSGHAISFVTQYDLELWLRIEAALGTKLTEYSLEKDDVMVFRPRVEEAQRIAKTEI 456
Query: 369 KDSGNKRRRKGGDEDDDIGRQFG 391
K + R +KG GR+ G
Sbjct: 457 KALMDDRGKKGSVLKGGKGRKRG 479
>gi|260808869|ref|XP_002599229.1| hypothetical protein BRAFLDRAFT_64422 [Branchiostoma floridae]
gi|229284506|gb|EEN55241.1| hypothetical protein BRAFLDRAFT_64422 [Branchiostoma floridae]
Length = 436
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/362 (63%), Positives = 280/362 (77%), Gaps = 22/362 (6%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTG FALPILQ+LLE + QR FA VL+PTRELA QISEQFEA
Sbjct: 58 GKDVIGLAETGSGKTGTFALPILQSLLE--KPQR----LFALVLTPTRELAFQISEQFEA 111
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++C V+VGG+DM+ Q L L K+PH+++ATPGRL+DHL NTKGF+L LKYLV
Sbjct: 112 LGSSIGIKCVVVVGGIDMVTQALQLAKKPHVIIATPGRLVDHLENTKGFNLRALKYLV-- 169
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
D+IL VIPR R TYLFSATMTKKV KLQRA L NPVK+E SKY T
Sbjct: 170 --------------DKILKVIPRERHTYLFSATMTKKVAKLQRASLSNPVKVEVNSKYKT 215
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTL+Q Y F+P+KYKD YLV IL E++ +S MVF TC+ T+ A +LRNLG AIP+
Sbjct: 216 VDTLQQSYLFIPSKYKDVYLVSILNELAGNSFMVFCSTCNNTQRTAFLLRNLGFNAIPLH 275
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQ+ RLGAL+KFKA +ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 276 GQLSQNSRLGALHKFKAKSRSILIATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRT 335
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E Y +IE LIGKKLP + EEEEV+++ ERV EA+R ++M +
Sbjct: 336 ARAGRSGKAITFVTQYDVELYQRIEHLIGKKLPLYKTEEEEVMVMNERVMEAQRYARMEM 395
Query: 369 KD 370
K+
Sbjct: 396 KE 397
>gi|156052799|ref|XP_001592326.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|160358660|sp|A7EML8.1|RRP3_SCLS1 RecName: Full=ATP-dependent rRNA helicase rrp3
gi|154704345|gb|EDO04084.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 482
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/373 (58%), Positives = 288/373 (77%), Gaps = 7/373 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQ+LL+ + F VL+PTRELA QIS+ FEA
Sbjct: 93 GRDLIGLAETGSGKTAAFALPILQSLLDKPQ------PLFGLVLAPTRELAYQISQSFEA 146
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+DM+ Q +ALGK+PHI+VATPGRL+DHL NTKGFSL +LKYLV+D
Sbjct: 147 LGSIIRVKCAVIVGGMDMVPQAIALGKKPHIIVATPGRLLDHLENTKGFSLRSLKYLVMD 206
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF LD+IL V+PR R+TYLFSAT++ KV+ LQRA LK+P+++ +S KY
Sbjct: 207 EADRLLDLDFGPILDKILKVLPRERRTYLFSATISSKVESLQRASLKDPLRVSISSNKYQ 266
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P +KD YL+Y+L E + S ++FTRT + T+ +A++LR LG AIP+
Sbjct: 267 TVSTLIQNYIFIPLVHKDTYLIYLLNEFAGQSAIIFTRTVNETQRIAILLRTLGFGAIPL 326
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGALNKF+AG IL+ TDVA+RGLDIPSVD+V+NYD+P +SK YIHRVGR
Sbjct: 327 HGQLSQSSRLGALNKFRAGSREILVATDVAARGLDIPSVDVVLNYDMPQDSKTYIHRVGR 386
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G AIS V QY++E +++IE +GKK E+ ++EV++ RV EA+R ++
Sbjct: 387 TARAGKSGHAISFVTQYDVEIWMRIEAALGKKQEEYQTVKDEVMVFKPRVEEAQRHARNE 446
Query: 368 IKDSGNKRRRKGG 380
+K+ R +KG
Sbjct: 447 MKNLHEDRGKKGA 459
>gi|440638773|gb|ELR08692.1| ATP-dependent rRNA helicase rrp3 [Geomyces destructans 20631-21]
Length = 485
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/374 (58%), Positives = 288/374 (77%), Gaps = 7/374 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+DLIGLA+TGSGKT AFALPILQALL+ + F VL+PTRELA QIS+ FE
Sbjct: 95 AGRDLIGLAETGSGKTAAFALPILQALLDKPQ------PLFGLVLAPTRELAYQISKSFE 148
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
LG IS+RCAV+VGG+DM+ Q++ALGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+
Sbjct: 149 GLGILISVRCAVIVGGMDMVTQSIALGKKPHIIVATPGRLLDHLENTKGFSLRALKYLVM 208
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKY 186
DEADRLL+ DF LD+IL V+PR R+TYLFSATM+ KV+ LQRA L++P++++ + +KY
Sbjct: 209 DEADRLLDLDFGPILDKILKVLPRERRTYLFSATMSSKVESLQRASLRDPLRVQISTNKY 268
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
TV TL Q Y F+P +KD YL+Y+L + + S +VFTRT + T+ LA++LR LG AIP
Sbjct: 269 QTVSTLLQSYLFIPHPHKDTYLIYLLNDFAGQSAIVFTRTVNETQRLAILLRTLGFGAIP 328
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
+ G +SQS RLGALNKF+AG IL+ TDVA+RGLDIPSVD+V+NYD+P +SK YIHRVG
Sbjct: 329 LHGQLSQSARLGALNKFRAGSREILVATDVAARGLDIPSVDVVLNYDLPPDSKTYIHRVG 388
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQM 366
RTARAG++G AIS+V QY++E +L+IE +G K E+ ++EV++ RV EA+R ++
Sbjct: 389 RTARAGKSGHAISIVTQYDVEIWLRIEAALGMKQNEYKYVKDEVMVFKARVEEAQRHARN 448
Query: 367 TIKDSGNKRRRKGG 380
+K+ R KG
Sbjct: 449 EMKNLHEDRGNKGA 462
>gi|164661763|ref|XP_001732004.1| hypothetical protein MGL_1272 [Malassezia globosa CBS 7966]
gi|159105905|gb|EDP44790.1| hypothetical protein MGL_1272 [Malassezia globosa CBS 7966]
Length = 470
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/379 (58%), Positives = 288/379 (75%), Gaps = 15/379 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLAQTGSGKT AF++PILQ L + FAC+L+PTREL+ QIS+Q EA
Sbjct: 62 GRDVIGLAQTGSGKTAAFSIPILQGLWDDPR------PLFACILAPTRELSYQISQQIEA 115
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ I +RCA +VGG+DMM Q++AL KRPH++VATPGRL DHL NTKGFSL +L+YLV+D
Sbjct: 116 LGATIGVRCATIVGGMDMMTQSIALSKRPHVIVATPGRLQDHLENTKGFSLRSLRYLVMD 175
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +D++L IP+ R+T LFSATMT KV KLQRA L+NPV+IE +KYST
Sbjct: 176 EADRLLDLDFGPIIDKLLQNIPKERRTMLFSATMTTKVAKLQRASLRNPVRIEIGTKYST 235
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL+Q Y F+P +KD YLV++ E S +VFTRT + LA++LR LG AIP+
Sbjct: 236 VSTLQQYYLFMPFAHKDTYLVHLANEQVGHSIIVFTRTVHDAQRLAVLLRLLGFSAIPLH 295
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQ+ RLGALNKFKAG +I++CTDVA+RGLDIP+VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 296 GQLSQTARLGALNKFKAGGRSIMVCTDVAARGLDIPAVDLVVNFDIPTHSKDYIHRVGRT 355
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFP--AEEEEVLLLLERVTEAKR--IS 364
ARAGR G +++LV QY++E +IE IGK+L EFP + + ++LL ERV EA+R I
Sbjct: 356 ARAGRQGRSVTLVTQYDVELLQRIEAAIGKRLDEFPGAGDRDMIMLLSERVGEAQRAAIR 415
Query: 365 QMTIKDSGN-----KRRRK 378
++ K GN +R+RK
Sbjct: 416 ELQEKGFGNAGGAGRRKRK 434
>gi|58271466|ref|XP_572889.1| ATP-dependent RNA helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115044|ref|XP_773820.1| hypothetical protein CNBH2720 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819312|sp|P0CR01.1|RRP3_CRYNB RecName: Full=ATP-dependent rRNA helicase RRP3
gi|338819313|sp|P0CR00.1|RRP3_CRYNJ RecName: Full=ATP-dependent rRNA helicase RRP3
gi|50256448|gb|EAL19173.1| hypothetical protein CNBH2720 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229148|gb|AAW45582.1| ATP-dependent RNA helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 484
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/363 (62%), Positives = 282/363 (77%), Gaps = 6/363 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKT AF+LPILQ L E + FFA VL+PTRELA QIS+Q +
Sbjct: 75 GKDIIGLAQTGSGKTAAFSLPILQTLWENPQ------PFFALVLAPTRELAYQISQQVTS 128
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI +R AVLVGG+DMM Q++AL KRPHI+VATPGRLMDHL NTKGFSL +LKYLV+D
Sbjct: 129 LGSGIGVRTAVLVGGMDMMSQSIALSKRPHIIVATPGRLMDHLENTKGFSLKSLKYLVMD 188
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +D+IL VIP+ R TYLFSATMT KV KLQRA L PV++E +SKYST
Sbjct: 189 EADRLLDLDFGPIIDKILKVIPKERNTYLFSATMTTKVAKLQRASLNKPVRVEVSSKYST 248
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y +P K KD YL+Y+ E+S+SS M+FTRT ++ L+++LR LG AIP+
Sbjct: 249 VSTLLQHYLLLPLKNKDAYLLYLANELSSSSMMIFTRTVADSQRLSIILRRLGFPAIPLH 308
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M+QS RL +LNKFK+G +IL+ TDVASRGLDIP VD+VINYD+PTNSKDY+HRVGRT
Sbjct: 309 GQMTQSLRLASLNKFKSGGRSILVATDVASRGLDIPLVDLVINYDMPTNSKDYVHRVGRT 368
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+LV QY++E +IE IGKK+ F ++E V LL + V +A R + + +
Sbjct: 369 ARAGRSGKSITLVTQYDVEILQRIESHIGKKMTSFDVDKEAVALLTDTVAKANREAALEM 428
Query: 369 KDS 371
++S
Sbjct: 429 RES 431
>gi|322703417|gb|EFY95026.1| ATP-dependent rRNA helicase RRP3 [Metarhizium anisopliae ARSEF 23]
Length = 478
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/371 (59%), Positives = 286/371 (77%), Gaps = 7/371 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IGLA+TGSGKT AFALPILQALL+ + F VL+PTRELA QI + FEAL
Sbjct: 95 RDIIGLAETGSGKTAAFALPILQALLDKPQ------PLFGLVLAPTRELAHQIGQAFEAL 148
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GS ISLRCAV+VGG+DM+ Q +ALGK+PHI+VATPGRL+DHL TKGFSL TLKYLV+DE
Sbjct: 149 GSSISLRCAVIVGGLDMVPQAVALGKKPHIIVATPGRLVDHLEKTKGFSLRTLKYLVMDE 208
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYST 188
ADRLL+ DF ++D++L IPR R+TYLFSAT++ KV+ LQRA L++PV++ +S KY T
Sbjct: 209 ADRLLDMDFGPAIDKLLKFIPRERRTYLFSATLSSKVESLQRASLRDPVRVSVSSNKYQT 268
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q VP K KD YL+Y++ E + ST+VFTRT T+ +A++LR LG AIP+
Sbjct: 269 VSTLLQNLLVVPQKRKDTYLIYLVNEFTGKSTIVFTRTVWETQRIAILLRTLGFGAIPLH 328
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS RLGALNKF++G +IL+ TDVA+RGLDI VD+V+NYD+P +SK YIHRVGRT
Sbjct: 329 GQLSQSARLGALNKFRSGTRDILVATDVAARGLDISKVDVVLNYDLPQDSKTYIHRVGRT 388
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG++G+AISLV QY++E + +IE +GKKL +P E+EEVL RV EA+R +++ +
Sbjct: 389 ARAGKSGIAISLVTQYDIEIFQRIEAALGKKLDIYPTEKEEVLAFQHRVEEAQREARIEM 448
Query: 369 KDSGNKRRRKG 379
K K+ R+G
Sbjct: 449 KSLSEKKDRRG 459
>gi|358373394|dbj|GAA89992.1| ATP-dependent RNA helicase [Aspergillus kawachii IFO 4308]
Length = 471
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/363 (59%), Positives = 284/363 (78%), Gaps = 7/363 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQAL+E + FF +L+PTRELA QIS+ FE+
Sbjct: 89 GRDLIGLAETGSGKTAAFALPILQALMEKPQ------PFFGLILAPTRELAYQISKSFES 142
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ + +R V+VGG+DM+ Q+++LGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+D
Sbjct: 143 LGASLGVRSCVIVGGMDMVSQSISLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMD 202
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAA-SKYS 187
EADRLL+ DF LD+IL V+PR R+T+LFSATM+ KV+ LQRA L NP+++ + SKY
Sbjct: 203 EADRLLDMDFGPLLDKILKVLPRERRTFLFSATMSSKVESLQRASLSNPLRVSVSTSKYQ 262
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P K+KD YLVY+L E + ST++FTRT + T+ LA +LR LG AIP+
Sbjct: 263 TVSTLLQSYLFIPQKHKDLYLVYLLNEFAGQSTIIFTRTVNETQRLAFLLRALGFGAIPL 322
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL KF+A NIL+ TDVA+RGLDIPSVD+V+N+D+P +S Y+HRVGR
Sbjct: 323 HGQLSQSARLGALGKFRARSRNILVATDVAARGLDIPSVDVVLNFDLPGDSPSYVHRVGR 382
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G+AIS V QY++E +L+IE +GKKL E+ ++EV++L E V EA+R + M
Sbjct: 383 TARAGKSGLAISFVAQYDVEVWLRIEGALGKKLKEYDCPKDEVMVLGENVAEAQRQAIMD 442
Query: 368 IKD 370
+KD
Sbjct: 443 MKD 445
>gi|449017072|dbj|BAM80474.1| DEAD box protein [Cyanidioschyzon merolae strain 10D]
Length = 453
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/395 (59%), Positives = 290/395 (73%), Gaps = 28/395 (7%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKD++GLAQTGSGKT AFA+PILQ LLE + R +FA VLSPTRELA QISEQF
Sbjct: 55 AGKDIVGLAQTGSGKTAAFAIPILQFLLE---DPRP---YFALVLSPTRELAFQISEQFL 108
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
ALGS I +R A LVGG+DM+ Q + L KRPH+VV TPGR++DHLT TKGF+L ++ LVL
Sbjct: 109 ALGSEIGVRVATLVGGMDMVGQAVTLAKRPHVVVGTPGRVVDHLTATKGFTLKHVRILVL 168
Query: 128 DEADRLLNDDFEKSLDEILNVIPR-----------MRQTYLFSATMTKKVKKLQRACL-- 174
DEADRLLN DFE+ LD+IL +PR R+TYLFSATMT +V KLQRA L
Sbjct: 169 DEADRLLNMDFEEELDQILAAVPRSDADPSKGETFARKTYLFSATMTSQVAKLQRASLRS 228
Query: 175 KNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTE-VSASSTMVFTRTCDATRLL 233
K V+IE ++KYSTV+TL Q Y F+P KYKDCYL Y+ E V+ S +VFT T + + L
Sbjct: 229 KETVRIEVSAKYSTVETLVQHYLFIPEKYKDCYLTYLFEELVARHSCIVFTDTQSSAQRL 288
Query: 234 ALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYD 293
ALMLRNLG A+ I G MSQ RLGALN+FK+GE +IL+ TDVASRGLDIP VD VINYD
Sbjct: 289 ALMLRNLGYGAVCIHGGMSQPNRLGALNQFKSGEKHILVATDVASRGLDIPLVDFVINYD 348
Query: 294 IPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA-EEEEVLL 352
IP + KDYIHRVGRTARAGRTG AISLV+QY++E + ++EKL+G++L ++E VLL
Sbjct: 349 IPPHGKDYIHRVGRTARAGRTGRAISLVSQYDVELFQKVEKLLGRQLEALAGVQQEHVLL 408
Query: 353 LLERVTEAKRISQMTIKD-------SGNKRRRKGG 380
LL+RV+EA R++ I++ + KRR G
Sbjct: 409 LLDRVSEAARLAVQEIREEKLVLHAAARKRRIPAG 443
>gi|422293255|gb|EKU20555.1| dead deah box rna, partial [Nannochloropsis gaditana CCMP526]
Length = 414
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/350 (62%), Positives = 278/350 (79%), Gaps = 8/350 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALP+LQALL A+ QR FA VL+PTRELA QI E FEA
Sbjct: 71 GRDVIGLAETGSGKTGAFALPVLQALL--AKPQR----LFAVVLAPTRELAFQIHEVFEA 124
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ I L+ +VGGVDMM Q +AL ++PH+VVATPGRL+DHL NTKGF + ++LVLD
Sbjct: 125 LGASIGLKSCCVVGGVDMMTQAIALARKPHVVVATPGRLVDHLENTKGFHIREARFLVLD 184
Query: 129 EADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
EADR+L+ DFE+ +++IL ++P + R+T LFSATMT KV KLQRA L +PVK+EA+ K+
Sbjct: 185 EADRMLSMDFEEEINKILAIMPTGKHRRTLLFSATMTSKVAKLQRASLTDPVKVEASDKF 244
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
+T TL QQY F+PAKYKDCYL Y L E + + +VF TC+ + LAL+LRNLG AI
Sbjct: 245 TTPRTLVQQYLFIPAKYKDCYLAYALNEAAGQTILVFVATCNNAQRLALLLRNLGFGAIC 304
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
+ G M+Q KRLGAL+KFK+G+ +ILI TDVASRGLDIP+VD+VIN+DIP++ KDYIHRVG
Sbjct: 305 LHGQMTQPKRLGALHKFKSGQRSILIATDVASRGLDIPAVDLVINFDIPSHGKDYIHRVG 364
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLER 356
RTARAGR G +I++V QY++E Y ++E L+G KLPE+ +EE VL+LLER
Sbjct: 365 RTARAGRAGRSIAMVTQYDVEVYQRLEALLGTKLPEYKTDEETVLILLER 414
>gi|322696755|gb|EFY88543.1| ATP-dependent rRNA helicase RRP3 [Metarhizium acridum CQMa 102]
Length = 478
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/371 (58%), Positives = 285/371 (76%), Gaps = 7/371 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IGLA+TGSGKT AFALPILQALL+ + F VL+PTRELA QI + FEAL
Sbjct: 95 RDIIGLAETGSGKTAAFALPILQALLDKPQ------PLFGLVLAPTRELAHQIGQSFEAL 148
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GS ISLRCAV+VGG+DM+ Q +ALGK+PHI+VATPGRL+DHL TKGFSL TLKYLV+DE
Sbjct: 149 GSSISLRCAVIVGGLDMVPQAVALGKKPHIIVATPGRLVDHLEKTKGFSLRTLKYLVMDE 208
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYST 188
ADRLL+ DF ++D++L IPR R+TYLFSAT++ KV+ LQRA L++PV++ +S KY T
Sbjct: 209 ADRLLDMDFGPAIDKLLKFIPRERRTYLFSATLSSKVESLQRASLRDPVRVSVSSNKYQT 268
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q +P KD YL+Y++ E + ST++FTRT T+ +A++LR LG AIP+
Sbjct: 269 VSTLLQNLLVIPQMRKDTYLIYLVNEFTGKSTIIFTRTVWETQRIAILLRTLGFGAIPLH 328
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS RLGALNKF++G +IL+ TDVA+RGLDI VD+V+NYD+P +SK YIHRVGRT
Sbjct: 329 GQLSQSARLGALNKFRSGTRDILVATDVAARGLDISKVDVVLNYDLPQDSKTYIHRVGRT 388
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG++G+AISLV QY++E + +IE +GKKL +P E+EEVL RV EA+R +++ +
Sbjct: 389 ARAGKSGIAISLVTQYDIEVFQRIEAALGKKLDIYPTEKEEVLAFQHRVEEAQRHARIEM 448
Query: 369 KDSGNKRRRKG 379
K+ KR KG
Sbjct: 449 KNLSEKRHGKG 459
>gi|390598048|gb|EIN07447.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 449
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/362 (59%), Positives = 278/362 (76%), Gaps = 6/362 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+A TGSGKT AFALPILQ L E FACVL+PTRELA QIS+QFEA
Sbjct: 51 GRDIIGVASTGSGKTAAFALPILQKLWEEPRG------LFACVLAPTRELAYQISQQFEA 104
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +RCAVLVGG+D++ Q +AL K+PHI+VATPGRL HLT TKGFSL LK+LVLD
Sbjct: 105 LGSAMGVRCAVLVGGMDLIDQAVALAKKPHIIVATPGRLQQHLTETKGFSLRGLKFLVLD 164
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +D+IL +IP+ R TYLFSATMT KV KLQRA L NP+++E +SKY T
Sbjct: 165 EADRLLDLDFGPVIDQILKIIPKERTTYLFSATMTTKVAKLQRASLSNPIRVEVSSKYQT 224
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y F+P KD +L+Y+ ++++S ++FTRT + L++MLR LG A+P+
Sbjct: 225 VSTLLQYYLFIPLSQKDVHLIYLANSLASNSIIIFTRTVHDAQRLSIMLRILGFPAVPLH 284
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS RLGAL KFK+G +L+ TDVASRGLDIPSVD+VIN+DIP +SKDYIHRVGRT
Sbjct: 285 GQLSQSARLGALAKFKSGGRKVLVATDVASRGLDIPSVDIVINFDIPNHSKDYIHRVGRT 344
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+LV QY++E +IE++I KK+ +P ++EE+ LL ERV EA R++ +
Sbjct: 345 ARAGRSGKSITLVTQYDVELIQRIEEVIEKKMELWPTDKEEIALLRERVNEAGRLAINEM 404
Query: 369 KD 370
K+
Sbjct: 405 KE 406
>gi|405122110|gb|AFR96877.1| ATP-dependent rRNA helicase RRP3 [Cryptococcus neoformans var.
grubii H99]
Length = 484
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/363 (61%), Positives = 282/363 (77%), Gaps = 6/363 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKT AF+LPILQ L E + FFA VL+PTRELA QIS+Q +
Sbjct: 75 GKDIIGLAQTGSGKTAAFSLPILQTLWENPQ------PFFALVLAPTRELAYQISQQVTS 128
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI +R AVLVGG+DMM Q++AL KRPH++VATPGRLMDHL NTKGFSL +LKYLV+D
Sbjct: 129 LGSGIGVRTAVLVGGMDMMSQSIALSKRPHVIVATPGRLMDHLENTKGFSLKSLKYLVMD 188
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +D++L VIP+ R TYLFSATMT KV KLQRA L PV++E +SKYST
Sbjct: 189 EADRLLDLDFGPIIDKVLKVIPKERNTYLFSATMTTKVAKLQRASLNKPVRVEVSSKYST 248
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y +P K KD YL+Y+ E+S+SS ++FTRT ++ L+++LR LG AIP+
Sbjct: 249 VSTLLQHYLLLPLKNKDAYLLYLANELSSSSMIIFTRTVADSQRLSIILRRLGFPAIPLH 308
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M+QS RL +LNKFK+G +IL+ TDVASRGLDIP VD+VINYD+PTNSKDY+HRVGRT
Sbjct: 309 GQMTQSLRLASLNKFKSGGRSILVATDVASRGLDIPLVDLVINYDMPTNSKDYVHRVGRT 368
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+LV QY++E +IE IGKK+ F ++E V LL + V +A R + + +
Sbjct: 369 ARAGRSGKSITLVTQYDVEILQRIESHIGKKMTSFDVDKEAVALLTDTVAKANREAALEM 428
Query: 369 KDS 371
++S
Sbjct: 429 RES 431
>gi|452977644|gb|EME77410.1| hypothetical protein MYCFIDRAFT_83332 [Pseudocercospora fijiensis
CIRAD86]
Length = 498
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/366 (58%), Positives = 280/366 (76%), Gaps = 7/366 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKT AFALPILQALL+ + F +L+PTRELA QIS+QFEA
Sbjct: 111 GKDIIGLAETGSGKTAAFALPILQALLDKPQ------PLFGLILAPTRELAYQISQQFEA 164
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS IS+RCAV+VGG+DM+ Q +AL K+PHIVVATPGRL+DH+ NTKGFS+ KYLV+D
Sbjct: 165 LGSLISVRCAVIVGGMDMVPQAVALAKKPHIVVATPGRLLDHMENTKGFSVKHFKYLVMD 224
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYS 187
EADRLL+ DF LD+IL + R R+T LFSATM+ K+ L RA L+NPV++ + S Y
Sbjct: 225 EADRLLDLDFGPILDKILQELNRDRRTMLFSATMSTKLNSLTRAALQNPVRVSISESSYQ 284
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV L Q+Y F+P KYKD YLVY+L E + + ++FTRT T+ +A +LR LG+ AIP+
Sbjct: 285 TVKNLMQRYMFIPHKYKDIYLVYLLDEFAGKTCIIFTRTIHETQRIAYVLRALGRSAIPL 344
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G M+QS RLGALNKF+ G +IL+ TDVA+RGLDIPSVD+V+N+D+P +SK Y+HRVGR
Sbjct: 345 HGQMNQSARLGALNKFRGGSRDILVATDVAARGLDIPSVDLVLNFDLPPDSKTYVHRVGR 404
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++GVAIS+V QY++E Y +IEK +GKKL E E EEV++ RV EA+R++
Sbjct: 405 TARAGKSGVAISIVTQYDIEIYQRIEKALGKKLEEHATEREEVMVFAPRVAEAQRVAITE 464
Query: 368 IKDSGN 373
+K+ +
Sbjct: 465 LKNDAD 470
>gi|321262460|ref|XP_003195949.1| ATP-dependent RNA helicase [Cryptococcus gattii WM276]
gi|317462423|gb|ADV24162.1| ATP-dependent RNA helicase, putative [Cryptococcus gattii WM276]
Length = 484
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/363 (61%), Positives = 281/363 (77%), Gaps = 6/363 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKT AF+LPILQ L E + FFA VL+PTRELA QIS+Q +
Sbjct: 75 GKDIIGLAQTGSGKTAAFSLPILQTLWENPQ------PFFALVLAPTRELAYQISQQITS 128
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI +R AVLVGG+DMM Q++AL KRPH++VATPGRLMDHL NTKGFSL +LKYLV+D
Sbjct: 129 LGSGIGVRTAVLVGGMDMMSQSIALSKRPHVIVATPGRLMDHLENTKGFSLKSLKYLVMD 188
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +D++L VIP+ R TYLFSATMT KV KLQRA L PV++E +SKYST
Sbjct: 189 EADRLLDLDFGPIIDKVLKVIPKERNTYLFSATMTTKVAKLQRASLNKPVRVEVSSKYST 248
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y +P K KD YL+Y+ E+S+SS ++FTRT ++ L+++LR LG AIP+
Sbjct: 249 VSTLLQHYLLLPLKNKDSYLLYLANELSSSSMIIFTRTVADSQRLSIILRRLGFPAIPLH 308
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M+QS RL +LNKFK+G +IL+ TDVASRGLDIP VD+VINYD+PTNSKDY+HRVGRT
Sbjct: 309 GQMTQSLRLASLNKFKSGGRSILVATDVASRGLDIPLVDLVINYDMPTNSKDYVHRVGRT 368
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+LV QY++E +IE IGKK+ F ++E V LL + V A R + + I
Sbjct: 369 ARAGRSGKSITLVTQYDVEILQRIESHIGKKMTSFDVDKEAVALLTDTVARANREAALEI 428
Query: 369 KDS 371
++S
Sbjct: 429 RES 431
>gi|320583325|gb|EFW97540.1| ATP-dependent rRNA helicase, putative [Ogataea parapolymorpha DL-1]
Length = 470
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/373 (58%), Positives = 278/373 (74%), Gaps = 6/373 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+AQTGSGKT AFA+PILQAL E +FACVL+PTRELA QI E F+A
Sbjct: 104 GRDIIGIAQTGSGKTAAFAIPILQALWEAQT------PYFACVLAPTRELAYQIRETFDA 157
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + LRC+ +VGG+DMM+Q L ++PH++VATPGRLMDHL NTKGFSL LKYLV+D
Sbjct: 158 LGVNMGLRCSTIVGGMDMMEQAKELMRKPHVIVATPGRLMDHLENTKGFSLKALKYLVMD 217
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ +F LD ILN+IPR R+TYLFSAT+T KV+KLQRA L +PVKI KYST
Sbjct: 218 EADRLLDMEFGPVLDRILNIIPRERKTYLFSATLTSKVEKLQRASLIDPVKIAVNDKYST 277
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTL Q VP YK+ YL+Y+L E S +VF RTC + +AL+ R LG AIP+
Sbjct: 278 VDTLIQTLMVVPDGYKNTYLIYLLNEYVGKSVIVFARTCAHAQKVALLARILGFSAIPLH 337
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G ++Q++RLGALNKFK+G+ IL+ TDVA+RGLDIPSVD+V+NYDIPT+SK YIHRVGRT
Sbjct: 338 GQLTQAQRLGALNKFKSGDKQILVATDVAARGLDIPSVDLVVNYDIPTDSKAYIHRVGRT 397
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G ++SLV QY+LE L+IEK+I KLP+ + E+L L + V A + +
Sbjct: 398 ARAGRSGKSVSLVTQYDLELILRIEKVIDMKLPKEVPNKNEILALHDSVDRATAQAVSKV 457
Query: 369 KDSGNKRRRKGGD 381
K+ +KR+ + D
Sbjct: 458 KEFHSKRKFRKKD 470
>gi|242782113|ref|XP_002479938.1| ATP-dependent RNA helicase , putative [Talaromyces stipitatus ATCC
10500]
gi|218720085|gb|EED19504.1| ATP-dependent RNA helicase , putative [Talaromyces stipitatus ATCC
10500]
Length = 478
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/387 (57%), Positives = 291/387 (75%), Gaps = 9/387 (2%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+DLIGLA+TGSGKT AFALPILQAL++ + FF VL+PTRELA QISE FEAL
Sbjct: 90 RDLIGLAETGSGKTAAFALPILQALMDKPQ------PFFGLVLAPTRELAYQISEAFEAL 143
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GS IS+R VLVGG+DM+ Q +A+GKRPHI+VATPGRL+DHL NTKGFSL +LKYLV+DE
Sbjct: 144 GSTISVRSVVLVGGMDMVPQAIAIGKRPHIIVATPGRLLDHLENTKGFSLRSLKYLVMDE 203
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYST 188
ADRLL+ DF +D+IL V+PR R+T+LFSATM+ KV+ LQRA L NP+++ +S KY T
Sbjct: 204 ADRLLDMDFGPIIDKILKVLPRERRTFLFSATMSSKVEGLQRASLSNPLRVSVSSNKYQT 263
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y F+P K+KD +L+++L E S ++FTRT T L ++ R LG AI +
Sbjct: 264 VSTLLQYYLFIPHKHKDVHLIWLLNEHVGQSVIIFTRTVHETMRLTILARALGFGAIALH 323
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS RLGAL KF++ +ILI TDVA+RGLDIPSVD+V+NYD+ +SK ++HR+GRT
Sbjct: 324 GQLSQSARLGALGKFRSRSRDILIATDVAARGLDIPSVDLVLNYDLAADSKTHVHRIGRT 383
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG++G AISLV QY++E +L+IEK + +KLPE+ E+EEVL+L +RV EA+R + +
Sbjct: 384 ARAGKSGKAISLVTQYDVEVWLRIEKALDRKLPEYKVEKEEVLILSDRVAEAQRQAITEL 443
Query: 369 KDSGNKRRRKGGDEDDDIGRQFGINKK 395
KD R+ GG GR+FG K+
Sbjct: 444 KDL--DERKNGGRGSGPKGRRFGNGKR 468
>gi|242084812|ref|XP_002442831.1| hypothetical protein SORBIDRAFT_08g003560 [Sorghum bicolor]
gi|241943524|gb|EES16669.1| hypothetical protein SORBIDRAFT_08g003560 [Sorghum bicolor]
Length = 531
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/376 (61%), Positives = 288/376 (76%), Gaps = 22/376 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G DLI LAQTGSGKT AFALPILQALLE ++R FFACVLSPTRELAIQI+EQFEA
Sbjct: 154 GMDLIALAQTGSGKTAAFALPILQALLE---HRR---PFFACVLSPTRELAIQIAEQFEA 207
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I L C+VLVGGVD MQQ ++L + PHI+VATPGRL+DHLT+TKGFSL +KYLVLD
Sbjct: 208 LGSAIGLVCSVLVGGVDRMQQVISLARHPHIIVATPGRLLDHLTDTKGFSLNKIKYLVLD 267
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD LL+ +FEKSL++IL VIP+ R+T+LFSATMT K+K + KYST
Sbjct: 268 EADVLLDMEFEKSLNDILKVIPKERRTFLFSATMTDKLK--------------VSCKYST 313
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTL++++ VPA KDC LVY+L ++ S M+FT TC ++RLLALMLRNLG AI I+
Sbjct: 314 VDTLREEFYLVPANDKDCCLVYVLNKIPGSMIMIFTETCYSSRLLALMLRNLGFEAIFIN 373
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ KRLGALN+FK+ CNI+ CTDVASRGLDI VD+VINYDIP+ K Y+HRVGRT
Sbjct: 374 GKMSQDKRLGALNRFKSKGCNIITCTDVASRGLDIQGVDVVINYDIPS-LKSYVHRVGRT 432
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG++G A+SLVNQYE+ + IEKL+GK++ + +E E+ +L E V ++KRI+ + +
Sbjct: 433 ARAGQSGYALSLVNQYEVLRFKYIEKLLGKEISKSEVDECELKILKECVCDSKRIA-LKV 491
Query: 369 KDSGNKRRRKGGDEDD 384
K G KR R D++D
Sbjct: 492 KGDGCKRPRSMQDDED 507
>gi|402218296|gb|EJT98373.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 476
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 239/392 (60%), Positives = 281/392 (71%), Gaps = 22/392 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKT AFALPILQ L + FF VL+PTRELA QIS+QFEA
Sbjct: 76 GKDIIGLAETGSGKTAAFALPILQKLWHDPK------PFFCVVLAPTRELAYQISQQFEA 129
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I +RCAVL+GGV M+ Q +AL KRPHIVVATPGRL DHL NTKGFSL LKYLV+D
Sbjct: 130 LGSTIGVRCAVLIGGVKMVPQAVALSKRPHIVVATPGRLQDHLENTKGFSLRGLKYLVMD 189
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +D +L IPR R T LFSATMT KV KLQR L+NPVK+E +SKY T
Sbjct: 190 EADRLLDLDFGPIIDTLLKAIPRQRNTMLFSATMTTKVAKLQRTSLRNPVKVEVSSKYQT 249
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTC-DATRLLALMLRNLGQRAIPI 247
V TL Q Y PA K+ LV++LT VS ST+VF RT DAT+L L LRNLG AIP+
Sbjct: 250 VSTLLQTYVLTPAAVKEPQLVHLLTTVSGLSTIVFVRTIHDATKL-TLALRNLGFPAIPL 308
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQ KRLGA+++FKA IL+ TDVASRGLD+P VD VINYD+PTNSKDYIHRVGR
Sbjct: 309 HGDISQDKRLGAISRFKAEPGAILVATDVASRGLDMPKVDAVINYDLPTNSKDYIHRVGR 368
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEF-PAEEEEVLLLLERVTEAKRISQM 366
TARAGR G AIS+V QY++E +IE +IGKKL + EEV +L ERV EA R + +
Sbjct: 369 TARAGRAGKAISIVTQYDVELLQRIEHVIGKKLEAYGETTREEVEMLRERVGEAVRAATI 428
Query: 367 TIKDS---------GNKRRRKGG----DEDDD 385
+K+ G KR+R+G D DDD
Sbjct: 429 QMKEQEGKRTQGGRGRKRQREGKREQLDRDDD 460
>gi|429852313|gb|ELA27456.1| ATP-dependent rRNA helicase rrp3 [Colletotrichum gloeosporioides
Nara gc5]
Length = 476
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/371 (57%), Positives = 289/371 (77%), Gaps = 7/371 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IGLA+TGSGKT AFALPI+QALL+ + F VL+PTRELA QI+ FEAL
Sbjct: 91 RDVIGLAETGSGKTAAFALPIIQALLDKPSH------LFGLVLAPTRELAAQIAASFEAL 144
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GS ++LR AV+VGG+DM+ Q +ALGK+PHIVVATPGRL+DHL TKGFSL +LKYLV+DE
Sbjct: 145 GSLVNLRVAVIVGGLDMVAQAIALGKKPHIVVATPGRLVDHLEKTKGFSLRSLKYLVMDE 204
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYST 188
ADRLL+ DF S+D+IL IPR R+T+LFSATM+ K++ LQRA L++PV+I ++S + T
Sbjct: 205 ADRLLDMDFGPSIDKILKFIPRERRTFLFSATMSSKIESLQRASLRDPVRISISSSSHQT 264
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y F P KD YLVY++ E S ++FTRT T+ LA++LR LG AIPI
Sbjct: 265 VSTLIQNYIFCPHNKKDTYLVYLVNEYSGKKIVLFTRTVTETQRLAILLRTLGFGAIPIH 324
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G ++Q+ RLGALNKF+AG +IL+ TDVA+RGLDIP VD+VIN+DIP++SK Y+HRVGRT
Sbjct: 325 GQLNQTARLGALNKFRAGSRDILVATDVAARGLDIPLVDVVINFDIPSDSKTYVHRVGRT 384
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG++G AI+++ QY+LE YL+IE +GKKLPE+P +++EV + RV EA+R++++ +
Sbjct: 385 ARAGKSGKAITIMTQYDLEIYLRIEAALGKKLPEYPTQKDEVDVFQTRVEEAQRVARIEM 444
Query: 369 KDSGNKRRRKG 379
K+ + + ++G
Sbjct: 445 KNMMDAKGKRG 455
>gi|169609619|ref|XP_001798228.1| hypothetical protein SNOG_07902 [Phaeosphaeria nodorum SN15]
gi|143462316|sp|Q0UK12.2|RRP3_PHANO RecName: Full=ATP-dependent rRNA helicase RRP3
gi|160701880|gb|EAT84178.2| hypothetical protein SNOG_07902 [Phaeosphaeria nodorum SN15]
Length = 546
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/371 (57%), Positives = 287/371 (77%), Gaps = 8/371 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKD+IGLA+TGSGKT AF LPILQALL+ + A+F +++PTRELA QIS+Q +
Sbjct: 151 AGKDIIGLAETGSGKTAAFVLPILQALLDKPQ------AYFGLIMAPTRELAYQISQQVD 204
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
ALGS I+++CA LVGG+DM+ Q +AL KRPHI+VA+PGRL+DHL NTKGFSL LKYLVL
Sbjct: 205 ALGSIINVKCATLVGGMDMVPQAIALSKRPHIIVASPGRLLDHLENTKGFSLKHLKYLVL 264
Query: 128 DEADRLLNDDFEKSLDEILNVIPRM-RQTYLFSATMTKKVKKLQRACLKNPVKIE-AASK 185
DEADRLL+ DF SLD+I V+PR R TYLFSATM+ KV+ LQRA LKNPV++ ++S
Sbjct: 265 DEADRLLDLDFGDSLDKIFKVLPRDDRHTYLFSATMSSKVESLQRAALKNPVRVSISSSS 324
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+ V TL Q Y +P KYKD YL+++L + +T++FTRT + T+ LA++LR LG +A+
Sbjct: 325 HQVVSTLLQSYMLIPHKYKDLYLIHLLNDNIGHATILFTRTVNETQRLAVLLRTLGFQAL 384
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
P+ G +SQS RLGALNKFKA +IL+ TDVA+RGLDIPSVD+V+N+D+P +S+ Y+HRV
Sbjct: 385 PLHGQLSQSNRLGALNKFKAKARDILVATDVAARGLDIPSVDLVVNFDLPHDSETYVHRV 444
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
GRTARAG++G A+S V QY+LE + +IE +GK++PE +EV++ ERV EA+R++
Sbjct: 445 GRTARAGKSGKAVSFVTQYDLEIFQRIEHALGKQVPEEKVSRDEVMVYAERVGEAQRVAV 504
Query: 366 MTIKDSGNKRR 376
+KD ++R+
Sbjct: 505 REMKDLHDQRK 515
>gi|340960548|gb|EGS21729.1| ATP-dependent rRNA helicase rrp3-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 492
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/361 (58%), Positives = 283/361 (78%), Gaps = 7/361 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+DLIG+A+TGSGKT AFALPILQALL+ + FA VL+PTRELA QI++ FEAL
Sbjct: 108 RDLIGIAETGSGKTAAFALPILQALLDKPQ------PLFALVLAPTRELAAQIAQAFEAL 161
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GS ISLRCA+++GG+DM+QQ +ALGK+PH++VATPGRL+DHL TKGFSL LKYLV+DE
Sbjct: 162 GSMISLRCALILGGLDMVQQAIALGKKPHVIVATPGRLLDHLEKTKGFSLRNLKYLVMDE 221
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYST 188
ADRLL+ DF L++IL +PR R+T+LFSATM+ KV+ LQRA L++P+K+ + SKY T
Sbjct: 222 ADRLLDMDFGPILEKILKFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSISTSKYQT 281
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y F+P +KD YL+Y++ E + + ++FTRT T+ +A++LR LG AIP+
Sbjct: 282 VSTLVQHYIFIPHIHKDTYLIYLVNEFAGKTIIIFTRTVLETQRIAILLRTLGMGAIPLH 341
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS RLGALNKF+AG NIL+ TDVA+RGLDIP+VD V+N+D+P +SK Y+HRVGRT
Sbjct: 342 GGLSQSARLGALNKFRAGSRNILVATDVAARGLDIPNVDCVLNFDLPQDSKTYVHRVGRT 401
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG++G AIS V QY+LE +L+ E +G KL E+P E++EV++ RV EA+RI++ +
Sbjct: 402 ARAGKSGHAISFVTQYDLEIWLRTEAALGYKLTEYPLEKDEVMVFKPRVEEAQRIAKNEM 461
Query: 369 K 369
K
Sbjct: 462 K 462
>gi|143462274|sp|Q0CIQ3.2|RRP3_ASPTN RecName: Full=ATP-dependent rRNA helicase rrp3
Length = 445
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/388 (55%), Positives = 290/388 (74%), Gaps = 16/388 (4%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AF LP+LQAL++ + F + +L+PTRELA QI+ EA
Sbjct: 65 GRDLIGLAETGSGKTAAFVLPMLQALMDKPQQ------FHSLILAPTRELAQQIAHTVEA 118
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ IS+RC +L+GG+DM+ Q +ALGK+PH++VATPGRL+DHL NTKGFSL TLKYLVLD
Sbjct: 119 LGARISVRCTLLIGGMDMISQAIALGKKPHVIVATPGRLLDHLENTKGFSLRTLKYLVLD 178
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF LD++L ++P+ R+TYLFSATM+ KV+ LQRA L +PV++ ++K T
Sbjct: 179 EADRLLDLDFGPILDKLLRLLPK-RKTYLFSATMSSKVESLQRASLSDPVRVSVSTKNQT 237
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
L Q Y F+P K+KD YLVY+L E + ++FTRT T+ L++MLRNLG AIPI
Sbjct: 238 ASKLLQSYLFIPHKFKDFYLVYLLNERAGQMGIIFTRTVHETQRLSIMLRNLGFPAIPIH 297
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS RL +LNKF+A N+LI TDVA+RGLDIP+VD V+NYD+P +SK YIHRVGRT
Sbjct: 298 GQLSQSARLASLNKFRARSRNLLIATDVAARGLDIPAVDYVLNYDLPQDSKTYIHRVGRT 357
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG++G+A S V QYE+E +L+IE +GKK+ E+ E++EV++ ERV +A+R++ +T+
Sbjct: 358 ARAGKSGIAFSFVTQYEVELWLRIEDALGKKVEEYKPEKDEVMIFAERVNDAQRVAALTM 417
Query: 369 KDSGNK---------RRRKGGDEDDDIG 387
+D +K R+R D D D G
Sbjct: 418 RDMQDKDNKGRGPRNRKRTRDDLDQDDG 445
>gi|367044830|ref|XP_003652795.1| hypothetical protein THITE_2114564 [Thielavia terrestris NRRL 8126]
gi|347000057|gb|AEO66459.1| hypothetical protein THITE_2114564 [Thielavia terrestris NRRL 8126]
Length = 490
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/372 (57%), Positives = 290/372 (77%), Gaps = 7/372 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+A+TGSGKT AFALPILQALL+ + FA VL+PTRELA QI++ FEA
Sbjct: 99 GRDIIGIAETGSGKTAAFALPILQALLDKPQ------PLFALVLAPTRELAAQITQAFEA 152
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS ISLRCA+++GG+DM+QQ +ALGK+PH+VVATPGRL+DHL TKGFSL LKYLV+D
Sbjct: 153 LGSLISLRCALILGGLDMVQQAIALGKKPHVVVATPGRLLDHLEKTKGFSLRNLKYLVMD 212
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYS 187
EADRLL+ DF L++IL +PR R+T+LFSATM+ KV+ LQRA L++P+K+ ++SKY
Sbjct: 213 EADRLLDMDFGPILEKILKFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSISSSKYQ 272
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P +KD YL+Y+ E + + ++FTRT T+ +A++LR LG AIP+
Sbjct: 273 TVATLVQNYLFIPHMHKDTYLIYLCNEFAGQTIIIFTRTVLETQRIAILLRTLGMGAIPL 332
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGALNKF+AG NIL+ TDVA+RGLDIP+VD V+N+D+P +SK Y+HRVGR
Sbjct: 333 HGGLSQSARLGALNKFRAGSRNILVATDVAARGLDIPNVDCVLNFDLPQDSKTYVHRVGR 392
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G AIS+V QY++E +L+IE +G KL E+ E++EV++ RV EA+R ++
Sbjct: 393 TARAGKSGHAISIVTQYDIEIWLRIEAALGTKLTEYALEKDEVMVFKPRVEEAQRHAKNE 452
Query: 368 IKDSGNKRRRKG 379
+K ++R +KG
Sbjct: 453 MKQLIDERGKKG 464
>gi|409082704|gb|EKM83062.1| hypothetical protein AGABI1DRAFT_33446 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200570|gb|EKV50494.1| hypothetical protein AGABI2DRAFT_64060 [Agaricus bisporus var.
bisporus H97]
Length = 453
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/363 (59%), Positives = 279/363 (76%), Gaps = 8/363 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+A TGSGKT AF LPILQ L E + FACVL+PTRELA QIS+Q E+
Sbjct: 54 GRDIIGVAATGSGKTAAFGLPILQKLWEEPKG------LFACVLAPTRELAYQISQQLES 107
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + RCAV+VGG+DM Q +AL KRPHIVVATPGRLMDHL TKGF+L +K+LVLD
Sbjct: 108 LGSAMGARCAVIVGGMDMPAQAIALAKRPHIVVATPGRLMDHLEKTKGFNLRNIKFLVLD 167
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +D+IL +IP+ R TYLFSATMT KV KLQRA L NPV++E ++KY T
Sbjct: 168 EADRLLDLDFGTIIDKILKLIPKERTTYLFSATMTTKVAKLQRASLSNPVRVEVSTKYQT 227
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTC-DATRLLALMLRNLGQRAIPI 247
V TL Q Y +P K KD YLVY+ ++ +S ++FTRT DA+R L+++LR LG A+P+
Sbjct: 228 VSTLLQYYLLMPLKDKDAYLVYLANTLAQNSIIIFTRTVHDASR-LSIILRTLGFPAVPL 286
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS+RLGAL +FK+G +L+ TDVASRGLDIPSVD+VIN+DIPT+SKDYIHRVGR
Sbjct: 287 HGQLSQSQRLGALGQFKSGGRRVLVATDVASRGLDIPSVDVVINFDIPTHSKDYIHRVGR 346
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAGR G +I+LV QY++E +IE++IGKK+ +P +++E+ LL ER EA R++
Sbjct: 347 TARAGRAGKSITLVTQYDVELVQRIEQVIGKKMELWPTDDQEIALLRERADEAGRVAAAE 406
Query: 368 IKD 370
++D
Sbjct: 407 LRD 409
>gi|239606948|gb|EEQ83935.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces dermatitidis ER-3]
gi|327350595|gb|EGE79452.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces dermatitidis ATCC
18188]
Length = 482
Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/373 (61%), Positives = 292/373 (78%), Gaps = 7/373 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQAL+E ++ F +L+PTRELA QIS FEA
Sbjct: 93 GRDLIGLAETGSGKTAAFALPILQALMEKPQS------LFGLILAPTRELAYQISGAFEA 146
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS IS+RCAV+VGG+DM+ Q +ALGK+PHIVVATPGRL+DHL NTKGFSL LKYLV+D
Sbjct: 147 LGSLISVRCAVIVGGMDMVPQAIALGKKPHIVVATPGRLLDHLENTKGFSLRNLKYLVMD 206
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYS 187
EADRLL+ DF LD+IL V+PR R+TYLFSATM+ KV+ LQRA L NP+++ ++SKY
Sbjct: 207 EADRLLDLDFGPILDKILKVLPRERRTYLFSATMSSKVESLQRASLSNPLRVSISSSKYQ 266
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P KYKD YLVY+L E + S +VFTRT + T+ LA++LR LG AIP+
Sbjct: 267 TVSTLLQSYLFIPHKYKDLYLVYLLNEYAGQSAIVFTRTVNETQRLAILLRALGFGAIPL 326
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL+KF++ +IL+ TDVA+RGLDIPSVD+V+N+D+P +SK YIHRVGR
Sbjct: 327 HGQLSQSSRLGALSKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPPDSKTYIHRVGR 386
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G A ++V QY+LE +L+IE +GKKL E+ E+EEV++L +RV EA+R +
Sbjct: 387 TARAGKSGHAFNIVTQYDLEVWLRIENALGKKLEEYKVEKEEVMVLSDRVGEAQRHAITE 446
Query: 368 IKDSGNKRRRKGG 380
+KD KR +G
Sbjct: 447 MKDLHEKRGSRGA 459
>gi|432871166|ref|XP_004071865.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Oryzias latipes]
Length = 439
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/390 (57%), Positives = 280/390 (71%), Gaps = 59/390 (15%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPILQ+LL A QR VL+PTRELA QISEQFEA
Sbjct: 76 GKDVIGLAETGSGKTGAFALPILQSLL--ASPQR----LHTLVLTPTRELAFQISEQFEA 129
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+DMM Q+L L K+PHIV+ATPGRL+DH+ NTKGFSL LK+LV+D
Sbjct: 130 LGSSIGVKCAVIVGGIDMMSQSLVLAKKPHIVIATPGRLIDHMENTKGFSLRALKFLVMD 189
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LK+PVK ++KYST
Sbjct: 190 EADRILNMDFETEVDKILKVIPRERRTFLFSATMTKKVQKLQRAALKDPVKCAVSTKYST 249
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD L+Q Y F+PAKYK+
Sbjct: 250 VDKLQQYYVFIPAKYKN------------------------------------------- 266
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
KRLGALNKFK+ ++L+ TDVASRGLDIP VD VINYDIPT+SKDYIHRVGRT
Sbjct: 267 ------KRLGALNKFKSKSRSVLLATDVASRGLDIPHVDCVINYDIPTHSKDYIHRVGRT 320
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+ V QY++E + +IE LIGKKLP FP +EEEV++L+ERV+EA+R +++ +
Sbjct: 321 ARAGRSGKSITFVTQYDVELFQRIESLIGKKLPAFPTQEEEVMMLVERVSEAQRFARVEM 380
Query: 369 KDSGNKRRR---KGGDEDDDIGRQFGINKK 395
K+ G KR+R + GDE DD + G+ KK
Sbjct: 381 KEQGEKRKRPRGRDGDE-DDTEQASGVRKK 409
>gi|449297073|gb|EMC93092.1| hypothetical protein BAUCODRAFT_77654 [Baudoinia compniacensis UAMH
10762]
Length = 496
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/358 (59%), Positives = 277/358 (77%), Gaps = 7/358 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+G+D+IGLA+TGSGKT AFALPILQALL + FF VL+PTRELA QIS+QFE
Sbjct: 94 SGRDIIGLAETGSGKTAAFALPILQALLHDPQ------PFFGLVLAPTRELAYQISQQFE 147
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
ALGS I +RCAV+VGG+DM+ Q +AL K+PHIVVATPGRL+DHL NTKGFSL +LKYL++
Sbjct: 148 ALGSLIRVRCAVIVGGMDMVPQAIALAKKPHIVVATPGRLLDHLENTKGFSLRSLKYLIM 207
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKY 186
DEADRLL+ DF LD+IL V+PR R+T LFSATM K+ L RA L+NPV++ + S Y
Sbjct: 208 DEADRLLDLDFGPILDKILQVLPRERRTALFSATMNTKLDNLTRAALRNPVRVSISTSSY 267
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
TV L QQY F+P K+KD YL+++LTE S + ++FTRT T+ LA +LR L AIP
Sbjct: 268 QTVANLLQQYIFIPHKHKDVYLIHLLTEFSGQTCILFTRTVTETQRLAFLLRALNFSAIP 327
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
+ G + QS RLGALNKF++G +IL+ TDVA+RGLDIPSVD+VIN+D+P +SK Y+HRVG
Sbjct: 328 LHGQLPQSARLGALNKFRSGSRSILVATDVAARGLDIPSVDLVINFDLPPDSKTYVHRVG 387
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRIS 364
RTARAG++GVA+S+V QY++E + +IEK +G+KL E EEV++ ERV A+R++
Sbjct: 388 RTARAGKSGVAVSVVTQYDVEVFQRIEKALGRKLEERAVGREEVMVFAERVGAAQRVA 445
>gi|378727302|gb|EHY53761.1| ATP-dependent rRNA helicase RRP3 [Exophiala dermatitidis
NIH/UT8656]
Length = 480
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/373 (57%), Positives = 286/373 (76%), Gaps = 8/373 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AF LPILQAL++ + + +L+PTRELA QISE EA
Sbjct: 88 GRDLIGLAETGSGKTAAFVLPILQALMDKPQQ------LHSLILAPTRELAYQISEAVEA 141
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I++RCAVLVGG+DM+ Q +ALGK+PH++VATPGRL+DHL NTKGFSL LKYLV+D
Sbjct: 142 LGSLIAVRCAVLVGGMDMITQAIALGKKPHVIVATPGRLLDHLENTKGFSLRQLKYLVMD 201
Query: 129 EADRLLNDDFEKSLDEILNVIPRM-RQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KY 186
EADRLL+ DF LD+IL ++PR R+TYLFSATM+ KV+ LQRA L NP+++ + KY
Sbjct: 202 EADRLLDLDFGPILDKILKILPREGRKTYLFSATMSSKVESLQRASLSNPLRVAVSQDKY 261
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
TV TL Q Y F+P K+KD YL++IL E + + ++FTRT + + ++++LR LG AIP
Sbjct: 262 QTVSTLIQSYLFIPHKHKDLYLIHILNEHAGHTGIIFTRTVNEAQRVSILLRTLGFSAIP 321
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
I G +SQ RL ALNKF+A N+L+ +DVA+RGLDIPSVD+VIN+D+P +SK YIHRVG
Sbjct: 322 IHGQLSQQARLAALNKFRAKSRNLLVASDVAARGLDIPSVDLVINFDLPQDSKTYIHRVG 381
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQM 366
RTARAG++G+AIS V QY++E +L+IE +GKKL E+ +EEV++L ERV +A+R + +
Sbjct: 382 RTARAGKSGLAISFVTQYDVELWLRIEGALGKKLDEYKTVKEEVMVLAERVGDAQRAAAL 441
Query: 367 TIKDSGNKRRRKG 379
+K+ R +KG
Sbjct: 442 EMKELHENRGKKG 454
>gi|448090292|ref|XP_004197032.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|448094692|ref|XP_004198063.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|359378454|emb|CCE84713.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|359379485|emb|CCE83682.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
Length = 500
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/377 (57%), Positives = 277/377 (73%), Gaps = 7/377 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKT AFA+PILQ+L + +F VL+PTRELA QI E F+A
Sbjct: 126 GKDIIGLAQTGSGKTAAFAIPILQSLWDAQT------PYFGLVLAPTRELAYQIKETFDA 179
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + LR +VGG+DMM Q L +RPHI+VATPGR+MDHL +TKGFSL LKYLV+D
Sbjct: 180 LGSSMGLRTVCIVGGMDMMDQARDLMRRPHILVATPGRIMDHLEHTKGFSLKNLKYLVMD 239
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +LD+IL VIP R TYLFSATMT KV+KLQRA L NPVK+ ++KY T
Sbjct: 240 EADRLLDMDFGPALDKILKVIPTQRTTYLFSATMTSKVEKLQRASLHNPVKVAVSTKYQT 299
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
D L Q V YK+ YL+++L E S +VFTRTC ++ +L+ R LG A+P+
Sbjct: 300 ADNLVQSMMLVSDGYKNTYLIHLLNEFVGKSIIVFTRTCAHSQRTSLLARILGFSAVPLH 359
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS+RLG+LNKFK+G+ NIL+ TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRT
Sbjct: 360 GQLSQSQRLGSLNKFKSGKSNILVATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRT 419
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLE-RVTEAKRISQMT 367
ARAG++G +ISLV QY+LE YL+IE ++GKKLP+ P+ + L L V +A +
Sbjct: 420 ARAGKSGKSISLVTQYDLELYLRIENVLGKKLPKDPSPPRQALDALHVHVDKATAEAIRQ 479
Query: 368 IKDSGNKRRRKGGDEDD 384
K+ +KRR++ D+ D
Sbjct: 480 TKEFHDKRRKRSRDDVD 496
>gi|212526914|ref|XP_002143614.1| ATP-dependent RNA helicase , putative [Talaromyces marneffei ATCC
18224]
gi|210073012|gb|EEA27099.1| ATP-dependent RNA helicase , putative [Talaromyces marneffei ATCC
18224]
Length = 474
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/363 (58%), Positives = 283/363 (77%), Gaps = 7/363 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
+DLIGLA+TGSGKT AFALPILQAL++ + FF VL+PTRELA QISE FEA
Sbjct: 82 NRDLIGLAETGSGKTAAFALPILQALMDKPQ------PFFGLVLAPTRELAYQISEAFEA 135
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS IS+R VLVGG+DM+ Q +A+GKRPHI+VATPGRL+DHL NTKGFSL +LKYLV+D
Sbjct: 136 LGSTISVRSVVLVGGMDMVPQAIAIGKRPHIIVATPGRLLDHLENTKGFSLRSLKYLVMD 195
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF +D+IL V+PR R+T+LFSATM+ KV+ LQRA L NP+++ +S KY
Sbjct: 196 EADRLLDMDFGPIIDKILKVLPRERRTFLFSATMSSKVESLQRASLSNPLRVSVSSNKYQ 255
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P K+KD +L+++L E +T++FTRT T LAL+ R LG AI +
Sbjct: 256 TVSTLLQYYMFIPHKHKDVHLIWLLNEHIGQTTIIFTRTIHETNRLALLTRFLGFSAIAL 315
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RL +++KF++ +ILI TDVA+RGLDIPSVD+V+NYD+ +SK ++HR+GR
Sbjct: 316 HGQLSQSSRLASISKFRSKTRSILIATDVAARGLDIPSVDLVLNYDLAADSKTHVHRIGR 375
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G AISLV QY++E +L+IEK + KKLPE+ E++EVL+L +RV+EA+R +
Sbjct: 376 TARAGKSGKAISLVTQYDVEVWLRIEKALDKKLPEYKVEKDEVLILSDRVSEAQRQAITE 435
Query: 368 IKD 370
+KD
Sbjct: 436 LKD 438
>gi|406860112|gb|EKD13172.1| ATP-dependent rRNA helicase RRP3 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 497
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/395 (55%), Positives = 292/395 (73%), Gaps = 19/395 (4%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+DLI LA+TGSGKT AFALPILQ+LL+ + FF VL+PTRELA QIS+ FEAL
Sbjct: 109 RDLIALAETGSGKTAAFALPILQSLLDKPQ------PFFGLVLAPTRELAYQISQSFEAL 162
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GS I +RCAV+VGG+DM+ Q +ALGK+PHI+VA+PGRL+DHL NTKGFSL LKYLV+DE
Sbjct: 163 GSKIGVRCAVIVGGMDMVPQAIALGKKPHIIVASPGRLLDHLENTKGFSLRALKYLVMDE 222
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADRLL+ DF +D+IL VIPR R+TYLFSATM+ KV+ LQRA LK+P+++ ++KY TV
Sbjct: 223 ADRLLDLDFGAIIDKILKVIPRERRTYLFSATMSSKVESLQRASLKDPLRVSVSTKYQTV 282
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
TL Q VP +KD YLVY++ E + S ++FTRT + T+ LA++LR+LG AIP+ G
Sbjct: 283 STLIQNCLIVPLVHKDVYLVYLMNEFAGQSAIIFTRTVNETQRLAILLRSLGFGAIPLHG 342
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+SQ+ RLGALNKF+AG IL+ TDVA+RGLDIPSVD+V+NYD+P SK YIHRVGRTA
Sbjct: 343 QLSQTARLGALNKFRAGTRKILVATDVAARGLDIPSVDIVLNYDLPPESKTYIHRVGRTA 402
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK 369
RAG++G A S+V QY++E + + E + ++P + +EEV++ RV EA+R ++ +K
Sbjct: 403 RAGKSGHAFSIVTQYDVEIFTRTEAALKIRMPVYEPVKEEVMVFKARVEEAQRHARNEMK 462
Query: 370 ----DSGNK-------RRRKGGDE--DDDIGRQFG 391
D GNK R + GG++ DD+ R+ G
Sbjct: 463 NLHEDRGNKGSILKGRRPKTGGNKRGRDDMDREEG 497
>gi|336471127|gb|EGO59288.1| ATP-dependent rRNA helicase rrp-3 [Neurospora tetrasperma FGSC
2508]
gi|350292214|gb|EGZ73409.1| ATP-dependent rRNA helicase rrp-3 [Neurospora tetrasperma FGSC
2509]
Length = 515
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/372 (56%), Positives = 288/372 (77%), Gaps = 7/372 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IG+A+TGSGKT AFALPILQALL+ + P FA VL+PTRELA QI++ FEAL
Sbjct: 128 RDIIGIAETGSGKTAAFALPILQALLD-----KPAP-LFALVLAPTRELAAQIAQAFEAL 181
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GS ISLRCA+++GG+DM+ Q +ALGK+PH++VATPGRL+DHL TKGFSL +++YLV+DE
Sbjct: 182 GSLISLRCALILGGMDMVTQAIALGKKPHVIVATPGRLLDHLEKTKGFSLRSMQYLVMDE 241
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYST 188
ADRLL+ DF L++IL +PR R+T+LFSATM+ KV+ LQRA L++P+K+ +S KY+T
Sbjct: 242 ADRLLDMDFGPILEKILKFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSVSSNKYAT 301
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TLK Y F+P +KD YLVY+ E + + ++FTRT T+ +A++LR LG AIP+
Sbjct: 302 VSTLKSNYVFIPHMHKDTYLVYLCNEFAGQTIIIFTRTVLETQRIAILLRTLGMGAIPLH 361
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS RLGALNKF+AG IL+ TDVA+RGLDIP+VD VIN+D+P +SK Y+HRVGRT
Sbjct: 362 GGLSQSARLGALNKFRAGSREILVATDVAARGLDIPNVDCVINHDLPQDSKTYVHRVGRT 421
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG++G AIS+V QY+LE +L+IE +G KL E+P E++EV++ RV EA+R ++ +
Sbjct: 422 ARAGKSGHAISIVTQYDLEIWLRIEAALGHKLDEYPLEKDEVMVFKPRVEEAQRHARNEM 481
Query: 369 KDSGNKRRRKGG 380
K + + GG
Sbjct: 482 KSLMENQGKHGG 493
>gi|440486596|gb|ELQ66446.1| ATP-dependent rRNA helicase rrp3 [Magnaporthe oryzae P131]
Length = 538
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/375 (57%), Positives = 287/375 (76%), Gaps = 9/375 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+A+TGSGKT AFALPILQ+LLE + F VL+PTRELA QI + FEA
Sbjct: 147 GRDVIGIAETGSGKTAAFALPILQSLLEKPQ------PLFGLVLAPTRELAAQIGQTFEA 200
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ ISLRCAV+VGG+DM+ Q++ALGK+PHIVVATPGRL+DHL TKGFSL +LK+LV+D
Sbjct: 201 LGASISLRCAVVVGGLDMVSQSIALGKKPHIVVATPGRLLDHLEKTKGFSLRSLKFLVMD 260
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYS 187
EADRLL+ DF LD+IL +PR R+T+LFSATM+ KV+ LQRA L++P+K+ ++S+
Sbjct: 261 EADRLLDLDFGPILDKILKFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSVSSSQEK 320
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q F+P K+KD YL+Y+ E + +T+VFTRT + + ++++LR L AIP+
Sbjct: 321 TVSTLIQNPLFIPHKHKDVYLIYLANEFAGKTTIVFTRTVNEAQRVSILLRTLSFGAIPL 380
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGALNKFKA +IL+ TDVA+RGLDIP VD+VIN+D+P +S YIHRVGR
Sbjct: 381 HGQLSQSMRLGALNKFKARSRDILVATDVAARGLDIPEVDLVINFDMPQDSMTYIHRVGR 440
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEK--LIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
TARAGR+G AIS++ QY+LE +L+IEK L G+KLP F ++EEV++ ERV EA+R ++
Sbjct: 441 TARAGRSGRAISIITQYDLELWLRIEKAALNGRKLPLFQPDKEEVMVFKERVEEAQRHAR 500
Query: 366 MTIKDSGNKRRRKGG 380
+K R +KG
Sbjct: 501 EEMKALHEDRGKKGA 515
>gi|85082449|ref|XP_956915.1| ATP-dependent rRNA helicase RRP3 [Neurospora crassa OR74A]
gi|74662479|sp|Q7RY59.1|RRP3_NEUCR RecName: Full=ATP-dependent rRNA helicase rrp-3
gi|28917996|gb|EAA27679.1| ATP-dependent rRNA helicase RRP3 [Neurospora crassa OR74A]
Length = 515
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/372 (56%), Positives = 288/372 (77%), Gaps = 7/372 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IG+A+TGSGKT AFALPILQALL+ + P FA VL+PTRELA QI++ FEAL
Sbjct: 128 RDIIGIAETGSGKTAAFALPILQALLD-----KPAP-LFALVLAPTRELAAQIAQAFEAL 181
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GS ISLRCA+++GG+DM+ Q +ALGK+PH++VATPGRL+DHL TKGFSL +++YLV+DE
Sbjct: 182 GSLISLRCALILGGMDMVTQAIALGKKPHVIVATPGRLLDHLEKTKGFSLRSMQYLVMDE 241
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYST 188
ADRLL+ DF L++IL +PR R+T+LFSATM+ KV+ LQRA L++P+K+ +S KY+T
Sbjct: 242 ADRLLDMDFGPILEKILKFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSVSSNKYAT 301
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TLK Y F+P +KD YLVY+ E + + ++FTRT T+ +A++LR LG AIP+
Sbjct: 302 VSTLKSNYVFIPHMHKDTYLVYLCNEFAGQTIIIFTRTVLETQRIAILLRTLGMGAIPLH 361
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS RLGALNKF+AG IL+ TDVA+RGLDIP+VD VIN+D+P +SK Y+HRVGRT
Sbjct: 362 GGLSQSARLGALNKFRAGSREILVATDVAARGLDIPNVDCVINHDLPQDSKTYVHRVGRT 421
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG++G AIS+V QY+LE +L+IE +G KL E+P E++EV++ RV EA+R ++ +
Sbjct: 422 ARAGKSGHAISIVTQYDLEIWLRIEAALGHKLDEYPLEKDEVMVFKPRVEEAQRHARNEM 481
Query: 369 KDSGNKRRRKGG 380
K + + GG
Sbjct: 482 KSLMENQGKHGG 493
>gi|383854020|ref|XP_003702520.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Megachile rotundata]
Length = 404
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/390 (56%), Positives = 278/390 (71%), Gaps = 61/390 (15%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKT AFALPILQALLE QR +FA +L+PTRELA QISEQFEA
Sbjct: 55 GKDIIGLAETGSGKTAAFALPILQALLE--NPQR----YFALILTPTRELAFQISEQFEA 108
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+DMM Q L L K+PHI++ATPGRL+DHL NTKGF+L +LK+LV+D
Sbjct: 109 LGSSIGVKCAVIVGGMDMMSQALILAKKPHILIATPGRLIDHLENTKGFNLRSLKFLVMD 168
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T LFSATMTKKV+KLQRA L+NPVK+E ++KY T
Sbjct: 169 EADRILNMDFEVEVDKILRVIPRERRTLLFSATMTKKVQKLQRASLRNPVKVEVSTKYQT 228
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P K+K+
Sbjct: 229 VEKLQQYYIFIPVKFKN------------------------------------------- 245
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
KR+ AL KFKA +ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 246 ------KRIAALTKFKAKNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVGRT 299
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+ V QY++E Y +IE+LI K+LP +P +EEEV++L ERV EA+RI +M +
Sbjct: 300 ARAGRSGRSITFVTQYDVELYQRIEQLISKQLPLYPTQEEEVMVLQERVAEAQRIVKMEL 359
Query: 369 KD------SGNKRRRKGGDEDDDIGRQFGI 392
KD SG +++ +GGDEDDD + G+
Sbjct: 360 KDIEENKKSGKRKKHQGGDEDDDTEQSMGV 389
>gi|389642833|ref|XP_003719049.1| ATP-dependent rRNA helicase RRP3 [Magnaporthe oryzae 70-15]
gi|351641602|gb|EHA49465.1| ATP-dependent rRNA helicase RRP3 [Magnaporthe oryzae 70-15]
Length = 562
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/375 (57%), Positives = 286/375 (76%), Gaps = 9/375 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+A+TGSGKT AFALPILQ+LLE + F VL+PTRELA QI + FEA
Sbjct: 171 GRDVIGIAETGSGKTAAFALPILQSLLEKPQ------PLFGLVLAPTRELAAQIGQTFEA 224
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ ISLRCAV+VGG+DM+ Q+ ALGK+PHIVVATPGRL+DHL TKGFSL +LK+LV+D
Sbjct: 225 LGASISLRCAVVVGGLDMVSQSTALGKKPHIVVATPGRLLDHLEKTKGFSLRSLKFLVMD 284
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYS 187
EADRLL+ DF LD+IL +PR R+T+LFSATM+ KV+ LQRA L++P+K+ ++S+
Sbjct: 285 EADRLLDLDFGPILDKILKFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSVSSSQEK 344
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q F+P K+KD YL+Y+ E + +T+VFTRT + + ++++LR L AIP+
Sbjct: 345 TVSTLIQNPLFIPHKHKDVYLIYLANEFAGKTTIVFTRTVNEAQRVSILLRTLSFGAIPL 404
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGALNKFKA +IL+ TDVA+RGLDIP VD+VIN+D+P +S YIHRVGR
Sbjct: 405 HGQLSQSMRLGALNKFKARSRDILVATDVAARGLDIPEVDLVINFDMPQDSMTYIHRVGR 464
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEK--LIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
TARAGR+G AIS++ QY+LE +L+IEK L G+KLP F ++EEV++ ERV EA+R ++
Sbjct: 465 TARAGRSGRAISIITQYDLELWLRIEKAALNGRKLPLFQPDKEEVMVFKERVEEAQRHAR 524
Query: 366 MTIKDSGNKRRRKGG 380
+K R +KG
Sbjct: 525 EEMKALHEDRGKKGA 539
>gi|426225488|ref|XP_004006898.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Ovis aries]
Length = 408
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/400 (56%), Positives = 281/400 (70%), Gaps = 63/400 (15%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 63 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 116
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+D M Q+LAL K+PH+V+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 117 LGSSIGVQCAVIVGGIDSMSQSLALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMD 176
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 177 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 236
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+K
Sbjct: 237 VEKLQQYYLFIPSKFK-------------------------------------------- 252
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
SKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 253 -----SKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 307
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +
Sbjct: 308 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMEL 367
Query: 369 KDSGNKRRRK---GGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 368 REHGEKKKRSREDTGDNDDTEG-AIGVRNKVAGGKMKKRK 406
>gi|152060562|sp|A4RGD1.1|RRP3_MAGO7 RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 538
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/375 (57%), Positives = 286/375 (76%), Gaps = 9/375 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+A+TGSGKT AFALPILQ+LLE + F VL+PTRELA QI + FEA
Sbjct: 147 GRDVIGIAETGSGKTAAFALPILQSLLEKPQ------PLFGLVLAPTRELAAQIGQTFEA 200
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ ISLRCAV+VGG+DM+ Q+ ALGK+PHIVVATPGRL+DHL TKGFSL +LK+LV+D
Sbjct: 201 LGASISLRCAVVVGGLDMVSQSTALGKKPHIVVATPGRLLDHLEKTKGFSLRSLKFLVMD 260
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYS 187
EADRLL+ DF LD+IL +PR R+T+LFSATM+ KV+ LQRA L++P+K+ ++S+
Sbjct: 261 EADRLLDLDFGPILDKILKFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSVSSSQEK 320
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q F+P K+KD YL+Y+ E + +T+VFTRT + + ++++LR L AIP+
Sbjct: 321 TVSTLIQNPLFIPHKHKDVYLIYLANEFAGKTTIVFTRTVNEAQRVSILLRTLSFGAIPL 380
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGALNKFKA +IL+ TDVA+RGLDIP VD+VIN+D+P +S YIHRVGR
Sbjct: 381 HGQLSQSMRLGALNKFKARSRDILVATDVAARGLDIPEVDLVINFDMPQDSMTYIHRVGR 440
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEK--LIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
TARAGR+G AIS++ QY+LE +L+IEK L G+KLP F ++EEV++ ERV EA+R ++
Sbjct: 441 TARAGRSGRAISIITQYDLELWLRIEKAALNGRKLPLFQPDKEEVMVFKERVEEAQRHAR 500
Query: 366 MTIKDSGNKRRRKGG 380
+K R +KG
Sbjct: 501 EEMKALHEDRGKKGA 515
>gi|348569356|ref|XP_003470464.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Cavia porcellus]
Length = 406
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/382 (57%), Positives = 273/382 (71%), Gaps = 58/382 (15%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 60 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 113
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+D M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 114 LGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMD 173
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 174 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 233
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+K
Sbjct: 234 VEKLQQYYLFIPSKFK-------------------------------------------- 249
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
SKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 250 -----SKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 304
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +
Sbjct: 305 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMEL 364
Query: 369 KDSGNKRRRK---GGDEDDDIG 387
++ G K++R GD DD G
Sbjct: 365 REHGEKKKRSREDAGDNDDTEG 386
>gi|335308097|ref|XP_003361101.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Sus
scrofa]
Length = 473
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/304 (69%), Positives = 252/304 (82%), Gaps = 6/304 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 114 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 167
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+D M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 168 LGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMD 227
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 228 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 287
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 288 VEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 347
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 348 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 407
Query: 309 ARAG 312
ARAG
Sbjct: 408 ARAG 411
>gi|294657345|ref|XP_459659.2| DEHA2E08052p [Debaryomyces hansenii CBS767]
gi|91207781|sp|Q6BQ61.2|RRP3_DEBHA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|199432622|emb|CAG87892.2| DEHA2E08052p [Debaryomyces hansenii CBS767]
Length = 477
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/378 (57%), Positives = 274/378 (72%), Gaps = 7/378 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKT AFA+PILQAL E A++ VL+PTRELA QI E F+A
Sbjct: 102 GKDIIGLAQTGSGKTAAFAIPILQALWEAQA------AYYGLVLAPTRELAYQIKETFDA 155
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + LR +VGG+DMM Q L ++PHI+VATPGR+MDHL +TKGFSL LKYLV+D
Sbjct: 156 LGSSMGLRSVCIVGGMDMMDQARDLMRKPHILVATPGRIMDHLEHTKGFSLKNLKYLVMD 215
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +LD+IL +IP R TYLFSATMT K+ KLQRA L NPV++ ++KY T
Sbjct: 216 EADRLLDMDFGPALDKILKIIPTQRTTYLFSATMTNKIAKLQRASLHNPVRVAVSNKYQT 275
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
D L Q V YK+ YL+++L E S ++FTRTC ++ AL+ R LG A+P+
Sbjct: 276 ADNLVQSMMLVSDGYKNTYLIHLLNEFLGKSIIIFTRTCAHSQRTALLARILGFSAVPLH 335
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G ++Q++RLG+LNKFKAG+ NILI TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRT
Sbjct: 336 GQLTQAQRLGSLNKFKAGKANILIATDVAARGLDIPSVDIVINYDIPTDSKAYIHRVGRT 395
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLE-RVTEAKRISQMT 367
ARAG++G +ISL+ QY+LE YL+IE ++GKKLP+ P+ + VL L V A +
Sbjct: 396 ARAGKSGKSISLITQYDLEMYLRIESVLGKKLPKDPSPSKAVLDTLHVHVDRASAEAIRQ 455
Query: 368 IKDSGNKRRRKGGDEDDD 385
KD KR K +D D
Sbjct: 456 TKDFHEKRNPKKNRDDRD 473
>gi|189205104|ref|XP_001938887.1| ATP-dependent rRNA helicase rrp3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985986|gb|EDU51474.1| ATP-dependent rRNA helicase rrp3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 517
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/364 (57%), Positives = 285/364 (78%), Gaps = 8/364 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKT AF LPILQ+LLE + F +L+PTRELA QI++Q +A
Sbjct: 124 GRDVIGLAETGSGKTAAFVLPILQSLLEKPQ------PLFGLILAPTRELAYQIAQQVDA 177
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I+++CA LVGG+DM+ Q +AL KRPHIVVATPGRL+DHL NTKGFSL LKY+VLD
Sbjct: 178 LGSIINVKCATLVGGMDMVPQAIALSKRPHIVVATPGRLLDHLENTKGFSLKHLKYMVLD 237
Query: 129 EADRLLNDDFEKSLDEILNVIPRM-RQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKY 186
EADRLL+ DF LD+IL V+PR R TYLFSATM+ KV+ LQRA L+NPV++ ++S +
Sbjct: 238 EADRLLDLDFGPVLDKILKVLPREGRHTYLFSATMSSKVESLQRAALQNPVRVSISSSSH 297
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
V TL Q+Y F+P KYKD YLV++L + T++FTRT + T+ +A++LR LG AIP
Sbjct: 298 QVVSTLLQRYAFIPHKYKDLYLVHLLNDNIGHPTIIFTRTVNETQRIAVLLRALGFGAIP 357
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
+ G +SQS RLGALNKFK+ +IL+ TDVA+RGLDIP+VD+++N+D+P++S+ Y+HRVG
Sbjct: 358 LHGQLSQSARLGALNKFKSKSRDILVATDVAARGLDIPAVDLIVNFDLPSDSQTYVHRVG 417
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQM 366
RTARAG++G A+S V QY+LE +L+IE +GKK+PE +++E ++ ++RV+EA+R++
Sbjct: 418 RTARAGKSGKAVSFVTQYDLEIWLRIEHALGKKIPEQTFDKDEAMVYMDRVSEAQRVAIR 477
Query: 367 TIKD 370
+KD
Sbjct: 478 EMKD 481
>gi|402083740|gb|EJT78758.1| ATP-dependent rRNA helicase RRP3 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 485
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/375 (57%), Positives = 286/375 (76%), Gaps = 9/375 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+A+TGSGKT AFALPILQ+LL+ + F VL+PTRELA QI + FEA
Sbjct: 94 GRDVIGIAETGSGKTAAFALPILQSLLDKPQ------PLFGLVLAPTRELAAQIGQAFEA 147
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS ISLRCAV+VGG+DM+ Q++ALGK+PH+VVATPGRL+DHL TKGFSL +LKYLV+D
Sbjct: 148 LGSLISLRCAVVVGGLDMVSQSIALGKKPHVVVATPGRLLDHLEKTKGFSLRSLKYLVMD 207
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS- 187
EADRLL+ DF LD+IL +PR R+TYLFSATM+ KV+ LQRA L++P+++ +SK
Sbjct: 208 EADRLLDLDFGPILDKILKFLPRERRTYLFSATMSSKVESLQRASLRDPLRVSVSSKREK 267
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q +P +KD YL+Y++ E + +T++FTRT + + L+++LR L AIP+
Sbjct: 268 TVATLLQNPLIIPHMHKDVYLIYLVNEFAGQTTIIFTRTVNEAQRLSILLRTLSFGAIPL 327
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGALNKFKA +IL+ TDVA+RGLDIP VD+VINYD+P +S YIHRVGR
Sbjct: 328 HGQLSQSMRLGALNKFKAKSRDILVATDVAARGLDIPEVDLVINYDLPGDSMTYIHRVGR 387
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEK--LIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
TARAGR+G AIS+V QY++E +++IEK L G+KLP + + EEV++ ERV EA+R+++
Sbjct: 388 TARAGRSGRAISIVTQYDVELWMRIEKAALDGRKLPTYQPDREEVMVFKERVEEAQRVAR 447
Query: 366 MTIKDSGNKRRRKGG 380
+K+ R +KG
Sbjct: 448 NEMKELHEDRGKKGA 462
>gi|395538709|ref|XP_003771317.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Sarcophilus harrisii]
Length = 411
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/369 (58%), Positives = 267/369 (72%), Gaps = 55/369 (14%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FFA VL+PTRELA QISEQFEA
Sbjct: 62 GRDIIGLAETGSGKTGAFALPILNALLETPQR------FFALVLTPTRELAFQISEQFEA 115
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I + CAV+VGG+D M Q+LAL K+PH+++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 116 LGSSIGVECAVIVGGIDSMSQSLALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMD 175
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL +IPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 176 EADRILNMDFETEVDKILKLIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 235
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+K+
Sbjct: 236 VEKLQQYYLFIPSKFKN------------------------------------------- 252
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
KRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 253 ------KRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 306
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+ V QY++E Y +IE LIGKKLP FP +EEEV+LL ERV EA+R ++M +
Sbjct: 307 ARAGRSGKSITFVTQYDVELYQRIEHLIGKKLPAFPTQEEEVMLLTERVAEAQRFARMEM 366
Query: 369 KDSGNKRRR 377
++ G KR+R
Sbjct: 367 REQGEKRKR 375
>gi|397644308|gb|EJK76339.1| hypothetical protein THAOC_01902 [Thalassiosira oceanica]
Length = 476
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/378 (59%), Positives = 288/378 (76%), Gaps = 13/378 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAF++P+L LLE + QR+V FA +L+PTRELA QI E A
Sbjct: 91 GRDVIGLAETGSGKTGAFSIPVLNYLLE--KPQRSV---FAVILAPTRELAFQIHEVVAA 145
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSG+ +VGGVDM Q +AL + PH+VVATPGRL+DHL NTKGF L +KYLVLD
Sbjct: 146 LGSGMGASSVCVVGGVDMASQAIALARNPHVVVATPGRLLDHLQNTKGFHLRQIKYLVLD 205
Query: 129 EADRLLNDDFEKSLDEILNVIPRM---RQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADR+L+ DFE+ ++EIL VIP R+T LFSATMT KV+KLQRA L +PV++E ++K
Sbjct: 206 EADRMLSMDFEREINEILEVIPDHEGGRRTMLFSATMTSKVEKLQRASLVDPVRVEVSTK 265
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+ T L Q Y F+PAKYKDCYL Y++ E + S +VF TC+ + LALMLRNLG AI
Sbjct: 266 FQTPKKLLQSYLFIPAKYKDCYLTYLINEHAGQSILVFGATCNNVQRLALMLRNLGFPAI 325
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ KRLGAL KFKAG +I+ICTDVASRGLDIPSVD+VIN+D+P + KDYIHRV
Sbjct: 326 CLHGQMSQPKRLGALTKFKAGGRDIMICTDVASRGLDIPSVDVVINFDLPGHGKDYIHRV 385
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
GRTARAGR+G AI++V QY++E Y ++E L+G++LPE+ EEEVLLLLERV +A+R++
Sbjct: 386 GRTARAGRSGKAIAMVTQYDVEVYQRLEHLLGQRLPEYKLAEEEVLLLLERVNDAQRLAT 445
Query: 366 MTIKD-----SGNKRRRK 378
+K+ GN++ RK
Sbjct: 446 RELKEQISTRDGNRKGRK 463
>gi|301765214|ref|XP_002918023.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Ailuropoda melanoleuca]
Length = 406
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/399 (55%), Positives = 281/399 (70%), Gaps = 61/399 (15%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+K
Sbjct: 235 VEKLQQYYLFIPSKFK-------------------------------------------- 250
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
SKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 251 -----SKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 305
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +E+EV++L ERVTEA+R ++M +
Sbjct: 306 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQEDEVMMLTERVTEAQRFARMEL 365
Query: 369 KDSGNKRRRKGGD--EDDDIGRQFGINKK----KLSKRK 401
++ G K++R D ++DD+ G+ K K+ KRK
Sbjct: 366 REHGEKKKRTREDAGDNDDMEGAMGVRNKVAGGKMKKRK 404
>gi|226288804|gb|EEH44316.1| ATP-dependent rRNA helicase RRP3 [Paracoccidioides brasiliensis
Pb18]
Length = 482
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/373 (60%), Positives = 289/373 (77%), Gaps = 7/373 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQAL++ ++ F VL+PTRELA QISE FEA
Sbjct: 93 GRDLIGLAETGSGKTAAFALPILQALMDKPQS------LFGLVLAPTRELAYQISEAFEA 146
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS IS+RCAV+VGG+DM+ Q +ALGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+D
Sbjct: 147 LGSLISVRCAVIVGGMDMVPQAIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMD 206
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYS 187
EADRLL+ DF LD+IL V+PR R+TYLFSATM+ KV+ LQRA L NP+++ ++SKY
Sbjct: 207 EADRLLDLDFGPILDKILKVLPRERRTYLFSATMSSKVESLQRASLSNPLRVSISSSKYQ 266
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q + F+P KYKD YLVY+L E + S ++FTRT + T+ LA++LR LG AIP+
Sbjct: 267 TVSTLLQTFLFIPHKYKDIYLVYLLNEFAGQSAIIFTRTVNETQRLAILLRALGFGAIPL 326
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL KF++ +IL+ TDVA+RGLDIPSVD+V+N+D+P +SK YIHRVGR
Sbjct: 327 HGQLSQSYRLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPPDSKTYIHRVGR 386
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G A S V QY+LE +L+IE + KKL E+ E+EEV++L +RV EA+R +
Sbjct: 387 TARAGKSGHAFSFVTQYDLEVWLRIENALDKKLEEYKVEKEEVMVLSDRVGEAQRHAITE 446
Query: 368 IKDSGNKRRRKGG 380
+K+ R KG
Sbjct: 447 MKNLHENRGTKGA 459
>gi|291392612|ref|XP_002712706.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2
[Oryctolagus cuniculus]
Length = 406
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/399 (55%), Positives = 279/399 (69%), Gaps = 61/399 (15%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I + CAV+VGG+D M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVHCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+K
Sbjct: 235 VEKLQQYYIFIPSKFK-------------------------------------------- 250
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
SKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 251 -----SKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 305
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +
Sbjct: 306 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVAEAQRFARMEL 365
Query: 369 KDSGNKRRRKGGD--EDDDIGRQFGINKK----KLSKRK 401
++ G K++R D ++DD G+ K K+ KRK
Sbjct: 366 REHGEKKKRAREDVGDNDDTEGAMGVRNKVAGGKMKKRK 404
>gi|330923108|ref|XP_003300102.1| hypothetical protein PTT_11258 [Pyrenophora teres f. teres 0-1]
gi|311325897|gb|EFQ91780.1| hypothetical protein PTT_11258 [Pyrenophora teres f. teres 0-1]
Length = 516
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/364 (56%), Positives = 285/364 (78%), Gaps = 8/364 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKT AF LPILQ+LLE + F +L+PTRELA QI++Q +A
Sbjct: 123 GRDVIGLAETGSGKTAAFVLPILQSLLEKPQ------PLFGLILAPTRELAYQIAQQVDA 176
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I+++CA LVGG+DM+ Q +AL KRPHIVVATPGRL+DHL NTKGFSL LKY+VLD
Sbjct: 177 LGSIINVKCATLVGGMDMVPQAIALSKRPHIVVATPGRLLDHLENTKGFSLKHLKYMVLD 236
Query: 129 EADRLLNDDFEKSLDEILNVIPRM-RQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKY 186
EADRLL+ DF LD+IL V+PR R TYLFSATM+ KV+ LQRA L+NPV++ ++S +
Sbjct: 237 EADRLLDLDFGPVLDKILKVLPREGRHTYLFSATMSSKVENLQRAALQNPVRVSISSSSH 296
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
V TL Q+Y F+P KYKD YL+++L + T++FTRT + T+ +A++LR LG AIP
Sbjct: 297 QVVSTLLQRYAFIPHKYKDLYLIHLLNDNIGHPTIIFTRTVNETQRIAVLLRALGFGAIP 356
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
+ G +SQS RLGALNKFK+ +IL+ TDVA+RGLDIP+VD+++N+D+P++S+ Y+HRVG
Sbjct: 357 LHGQLSQSARLGALNKFKSKSRDILVATDVAARGLDIPAVDLIVNFDLPSDSQTYVHRVG 416
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQM 366
RTARAG++G A+S V QY+LE +L+IE +GKK+PE +++E ++ ++RV+EA+R++
Sbjct: 417 RTARAGKSGKAVSFVTQYDLEIWLRIEHALGKKIPEQTFDKDEAMVYMDRVSEAQRVAIR 476
Query: 367 TIKD 370
+KD
Sbjct: 477 EMKD 480
>gi|223634733|sp|A5DQF1.2|RRP3_PICGU RecName: Full=ATP-dependent rRNA helicase RRP3
gi|190348857|gb|EDK41404.2| hypothetical protein PGUG_05502 [Meyerozyma guilliermondii ATCC
6260]
Length = 475
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/377 (58%), Positives = 276/377 (73%), Gaps = 7/377 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKT AFA+PILQ+L E QR ++A VL+PTRELA QI E F+A
Sbjct: 101 GKDIIGLAQTGSGKTAAFAIPILQSLWEA---QR---PYYALVLAPTRELAYQIKETFDA 154
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSG+ +R +VGG+DMM Q L ++PHI+VATPGR+MDHL NTKGFSL +L+YLV+D
Sbjct: 155 LGSGMGVRSVCIVGGMDMMDQARDLMRKPHILVATPGRIMDHLENTKGFSLKSLQYLVMD 214
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +LD+IL VIP R TYLFSATMT K+ KLQRA L PVK+ ++KY T
Sbjct: 215 EADRLLDMDFGPALDKILKVIPTKRTTYLFSATMTNKIAKLQRASLHEPVKVAVSNKYQT 274
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
D L Q V YK+ +L+++L E S +VFTRTC T+ L+ R LG A+P+
Sbjct: 275 ADNLVQSMMLVSDGYKNTFLIHLLNEFMGKSIIVFTRTCAHTQRSTLLARILGFSAVPLH 334
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G ++QS+RLG+LNKFK+G+ NILI TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRT
Sbjct: 335 GQLTQSQRLGSLNKFKSGKANILIATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRT 394
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLE-RVTEAKRISQMT 367
ARAG++G +ISLV QY+LE YL+IE ++G KLP+ P+ +VL L V A +
Sbjct: 395 ARAGKSGKSISLVTQYDLEMYLRIESVLGFKLPKDPSPPRDVLNALHVHVDRASAEAIKQ 454
Query: 368 IKDSGNKRRRKGGDEDD 384
KD KR +K D+ D
Sbjct: 455 TKDFHEKRTKKKRDDRD 471
>gi|146413022|ref|XP_001482482.1| hypothetical protein PGUG_05502 [Meyerozyma guilliermondii ATCC
6260]
Length = 475
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/377 (58%), Positives = 276/377 (73%), Gaps = 7/377 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKT AFA+PILQ+L E QR ++A VL+PTRELA QI E F+A
Sbjct: 101 GKDIIGLAQTGSGKTAAFAIPILQSLWEA---QR---PYYALVLAPTRELAYQIKETFDA 154
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSG+ +R +VGG+DMM Q L ++PHI+VATPGR+MDHL NTKGFSL +L+YLV+D
Sbjct: 155 LGSGMGVRSVCIVGGMDMMDQARDLMRKPHILVATPGRIMDHLENTKGFSLKSLQYLVMD 214
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +LD+IL VIP R TYLFSATMT K+ KLQRA L PVK+ ++KY T
Sbjct: 215 EADRLLDMDFGPALDKILKVIPTKRTTYLFSATMTNKIAKLQRASLHEPVKVAVSNKYQT 274
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
D L Q V YK+ +L+++L E S +VFTRTC T+ L+ R LG A+P+
Sbjct: 275 ADNLVQSMMLVSDGYKNTFLIHLLNEFMGKSIIVFTRTCAHTQRSTLLARILGFSAVPLH 334
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G ++QS+RLG+LNKFK+G+ NILI TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRT
Sbjct: 335 GQLTQSQRLGSLNKFKSGKANILIATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRT 394
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLE-RVTEAKRISQMT 367
ARAG++G +ISLV QY+LE YL+IE ++G KLP+ P+ +VL L V A +
Sbjct: 395 ARAGKSGKSISLVTQYDLEMYLRIESVLGFKLPKDPSPPRDVLNALHVHVDRASAEAIKQ 454
Query: 368 IKDSGNKRRRKGGDEDD 384
KD KR +K D+ D
Sbjct: 455 TKDFHEKRTKKKRDDRD 471
>gi|345570196|gb|EGX53021.1| hypothetical protein AOL_s00007g357 [Arthrobotrys oligospora ATCC
24927]
Length = 523
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/356 (60%), Positives = 270/356 (75%), Gaps = 6/356 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKDLIGLA+TGSGKT AFALPILQAL + FAC+L+PTRELA QISEQ E
Sbjct: 138 AGKDLIGLAETGSGKTAAFALPILQALYHSPHS-----TLFACILAPTRELAFQISEQTE 192
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
A+G + ++ V+VGG+DMM Q +AL KRPHI+VATPGRL+DHL NTKGFSL ++KYLV+
Sbjct: 193 AIGGSLGVKTCVIVGGMDMMPQAIALSKRPHIIVATPGRLLDHLENTKGFSLRSIKYLVM 252
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADRLL+ DF +++IL V+P R TYLFSATMT KV++LQR L NPV++ +SKY
Sbjct: 253 DEADRLLDLDFGPIIEKILKVLPPQRNTYLFSATMTDKVERLQRMSLTNPVRVAVSSKYQ 312
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTM-VFTRTCDATRLLALMLRNLGQRAIP 246
TV +L Q + +P K KD YLVY++ E A TM +FTRT T+ ++++LR LG AIP
Sbjct: 313 TVKSLLQYFMLIPQKDKDTYLVYLVAEKFAGKTMIIFTRTIMDTQRISVLLRLLGCSAIP 372
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
+ G +SQ+ RLGALNKFKAG NIL+ TDVA+RGLDIP+VD VINYDI +SK YIHRVG
Sbjct: 373 LHGQLSQTGRLGALNKFKAGARNILVATDVAARGLDIPTVDYVINYDIAGDSKTYIHRVG 432
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
RTARAGR+GV ++LV QY++E + +IEK +GKKL E+ EV LL E V EA+R
Sbjct: 433 RTARAGRSGVCVNLVTQYDIEEFTRIEKALGKKLDALEVEKGEVSLLAESVGEAQR 488
>gi|149713748|ref|XP_001501504.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Equus caballus]
Length = 406
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/399 (55%), Positives = 280/399 (70%), Gaps = 61/399 (15%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+K
Sbjct: 235 VEKLQQYYLFIPSKFK-------------------------------------------- 250
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
SKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 251 -----SKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 305
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +
Sbjct: 306 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMEL 365
Query: 369 KDSGNKRRRKGGD--EDDDIGRQFGINKK----KLSKRK 401
++ G K++R D ++DD G+ K K+ KRK
Sbjct: 366 REHGEKKKRTREDVGDNDDTEGALGVRNKVAGGKMKKRK 404
>gi|451996880|gb|EMD89346.1| hypothetical protein COCHEDRAFT_1141477 [Cochliobolus
heterostrophus C5]
Length = 518
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 207/364 (56%), Positives = 283/364 (77%), Gaps = 8/364 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKT AF LPILQALLE + + F +L+PTRELA QI++Q +A
Sbjct: 126 GRDVIGLAETGSGKTAAFVLPILQALLEKQQ------SLFGLILAPTRELAYQIAQQVDA 179
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I+++CA LVGG+DM+ Q +AL K+PHI+VATPGRL+DHL NTKGFSL LKY+VLD
Sbjct: 180 LGSIINVKCATLVGGMDMVPQAIALSKKPHIIVATPGRLLDHLENTKGFSLKHLKYMVLD 239
Query: 129 EADRLLNDDFEKSLDEILNVIPRM-RQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKY 186
EADRLL+ DF LD+IL V+PR R TYLFSATM+ KV+ LQRA L+NPV++ ++S +
Sbjct: 240 EADRLLDLDFGPVLDKILKVLPREGRHTYLFSATMSSKVESLQRAALQNPVRVSISSSSH 299
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
V TL Q+Y F+P KYKD YL+++L + T++F+RT + T+ +A++LR LG AIP
Sbjct: 300 QVVSTLLQRYIFLPHKYKDLYLIHLLNDNIGHPTIIFSRTVNETQRIAILLRTLGFGAIP 359
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
+ G +SQS RLGALNKFK +IL+ TDVA+RGLDIP+VD+V+N+D+P++S+ Y+HRVG
Sbjct: 360 LHGQLSQSARLGALNKFKTQSRDILVATDVAARGLDIPAVDLVVNFDLPSDSQTYVHRVG 419
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQM 366
RTARAG++G A+S V QY+LE +L+IE +GK++PE ++E ++ +ERV EA+RI+
Sbjct: 420 RTARAGKSGKAVSFVTQYDLEIWLRIENALGKQIPEEVINKDEAMVYMERVNEAQRIAVR 479
Query: 367 TIKD 370
+KD
Sbjct: 480 EMKD 483
>gi|367033825|ref|XP_003666195.1| hypothetical protein MYCTH_2096529 [Myceliophthora thermophila ATCC
42464]
gi|347013467|gb|AEO60950.1| hypothetical protein MYCTH_2096529 [Myceliophthora thermophila ATCC
42464]
Length = 493
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/383 (55%), Positives = 289/383 (75%), Gaps = 7/383 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IG+A+TGSGKT AFALPILQALL+ + FA VL+PTRELA QI++ FEAL
Sbjct: 103 RDIIGIAETGSGKTAAFALPILQALLDKPQ------PLFALVLAPTRELAAQIAQAFEAL 156
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GS ISLRCA+++GG+DM+QQ +ALGK+PH+VVATPGRL+DHL TKGFSL LK+LV+DE
Sbjct: 157 GSLISLRCALILGGLDMVQQAIALGKKPHVVVATPGRLLDHLEKTKGFSLRNLKFLVMDE 216
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYST 188
ADRLL+ DF L++IL +PR R+T+LFSATM+ KV+ LQRA L++P+K+ ++SKY T
Sbjct: 217 ADRLLDMDFGPILEKILKFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSISSSKYQT 276
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y F+P +KD YL+Y+ E + + ++FTRT T+ +A++LR LG AIP+
Sbjct: 277 VSTLVQNYIFIPHMHKDTYLIYLCNEFAGQTIIIFTRTVLETQRIAILLRTLGMGAIPLH 336
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS RLGALNKF+A +IL+ TDVA+RGLDIP+VD V+N+D+P +SK Y+HRVGRT
Sbjct: 337 GGLSQSARLGALNKFRAKSRDILVATDVAARGLDIPNVDCVLNFDLPQDSKTYVHRVGRT 396
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG++G AIS V QY+LE +L+IE +G KL E+ E++EV++ RV EA+R ++ +
Sbjct: 397 ARAGKSGHAISFVTQYDLEIWLRIEAALGTKLTEYATEKDEVMVFKPRVEEAQRHAKNEM 456
Query: 369 KDSGNKRRRKGGDEDDDIGRQFG 391
K R +KG GR+ G
Sbjct: 457 KQLLEDRGKKGSVLKGGKGRKRG 479
>gi|296210932|ref|XP_002752173.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Callithrix jacchus]
Length = 406
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/399 (55%), Positives = 280/399 (70%), Gaps = 61/399 (15%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+K
Sbjct: 235 VEKLQQYYIFIPSKFK-------------------------------------------- 250
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
SKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 251 -----SKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 305
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +
Sbjct: 306 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMEL 365
Query: 369 KDSGNKRRRKGGD--EDDDIGRQFGINKK----KLSKRK 401
++ G K++R D ++DD G+ K K+ KRK
Sbjct: 366 REHGEKKKRSREDARDNDDTEGAIGVRNKVAGGKMKKRK 404
>gi|440475921|gb|ELQ44569.1| ATP-dependent rRNA helicase rrp3 [Magnaporthe oryzae Y34]
Length = 906
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/375 (57%), Positives = 287/375 (76%), Gaps = 9/375 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+A+TGSGKT AFALPILQ+LLE + F VL+PTRELA QI + FEA
Sbjct: 147 GRDVIGIAETGSGKTAAFALPILQSLLEKPQ------PLFGLVLAPTRELAAQIGQTFEA 200
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ ISLRCAV+VGG+DM+ Q++ALGK+PHIVVATPGRL+DHL TKGFSL +LK+LV+D
Sbjct: 201 LGASISLRCAVVVGGLDMVSQSIALGKKPHIVVATPGRLLDHLEKTKGFSLRSLKFLVMD 260
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYS 187
EADRLL+ DF LD+IL +PR R+T+LFSATM+ KV+ LQRA L++P+K+ ++S+
Sbjct: 261 EADRLLDLDFGPILDKILKFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSVSSSQEK 320
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q F+P K+KD YL+Y+ E + +T+VFTRT + + ++++LR L AIP+
Sbjct: 321 TVSTLIQNPLFIPHKHKDVYLIYLANEFAGKTTIVFTRTVNEAQRVSILLRTLSFGAIPL 380
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGALNKFKA +IL+ TDVA+RGLDIP VD+VIN+D+P +S YIHRVGR
Sbjct: 381 HGQLSQSMRLGALNKFKARSRDILVATDVAARGLDIPEVDLVINFDMPQDSMTYIHRVGR 440
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEK--LIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
TARAGR+G AIS++ QY+LE +L+IEK L G+KLP F ++EEV++ ERV EA+R ++
Sbjct: 441 TARAGRSGRAISIITQYDLELWLRIEKAALNGRKLPLFQPDKEEVMVFKERVEEAQRHAR 500
Query: 366 MTIKDSGNKRRRKGG 380
+K R +KG
Sbjct: 501 EEMKALHEDRGKKGA 515
>gi|410963866|ref|XP_003988480.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Felis catus]
Length = 406
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/400 (55%), Positives = 280/400 (70%), Gaps = 63/400 (15%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PH+++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+K
Sbjct: 235 VEKLQQYYVFIPSKFK-------------------------------------------- 250
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
SKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 251 -----SKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 305
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +
Sbjct: 306 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMEL 365
Query: 369 KDSGNKRRR---KGGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 366 REHGEKKKRVREDTGDNDDTEG-AMGVRNKVAGGKMKKRK 404
>gi|353241604|emb|CCA73408.1| probable DEAD box protein (putative RNA helicase) [Piriformospora
indica DSM 11827]
Length = 458
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/370 (58%), Positives = 276/370 (74%), Gaps = 6/370 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IG+A+TGSGKT AFALPILQ E + +AC+L+PTRELA QI +QFEAL
Sbjct: 69 RDIIGVAKTGSGKTAAFALPILQKWWEDPK------PLYACILAPTRELAYQIQKQFEAL 122
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
G+ + +RC +VGG+D+M Q +AL KRPHIVVATPGRL DHL NTKGFSL +LKYLVLDE
Sbjct: 123 GANLGVRCCCIVGGLDIMAQKVALAKRPHIVVATPGRLQDHLENTKGFSLRSLKYLVLDE 182
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADRLL+ DF +D+IL VIP+ R+T LFSATM+ KVK+LQRA L NPVK+E +SKYSTV
Sbjct: 183 ADRLLDMDFGPIIDKILKVIPKERRTMLFSATMSTKVKRLQRASLVNPVKVEVSSKYSTV 242
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
TL+Q Y F P K+ ++ ++ +S S +VFT T + T L LMLR L AIP+
Sbjct: 243 STLQQYYVFGPHMRKEVNMITLVRSLSGKSIIVFTNTVNDTIRLTLMLRALNIGAIPLHS 302
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+SQS RLG+LNKF+AG +LI TDVA+RGLDIP VD+VINY +P NSKDYIHRVGRTA
Sbjct: 303 KLSQSTRLGSLNKFRAGGRQVLIATDVAARGLDIPQVDVVINYGVPQNSKDYIHRVGRTA 362
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK 369
RAGR G AI+ V QY++E++L+IE++IGKK+ E+ E+E +L E+V EA R + M +K
Sbjct: 363 RAGRAGKAITFVTQYDIEFHLRIEEVIGKKMDEWVIPEQEAAMLAEKVEEAGRAAAMEMK 422
Query: 370 DSGNKRRRKG 379
D + ++G
Sbjct: 423 DMNLSKGKEG 432
>gi|73997169|ref|XP_866840.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Canis lupus familiaris]
Length = 407
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/382 (57%), Positives = 272/382 (71%), Gaps = 58/382 (15%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+K
Sbjct: 235 VEKLQQYYLFIPSKFK-------------------------------------------- 250
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
SKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 251 -----SKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 305
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +
Sbjct: 306 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMEL 365
Query: 369 KDSGNKRRR---KGGDEDDDIG 387
++ G K++R GD DD G
Sbjct: 366 REHGEKKKRTREDAGDNDDTEG 387
>gi|409045997|gb|EKM55477.1| hypothetical protein PHACADRAFT_184272 [Phanerochaete carnosa
HHB-10118-sp]
Length = 472
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/391 (56%), Positives = 275/391 (70%), Gaps = 29/391 (7%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+A TGSGKT AFALPILQ L + FACV++PTRELA QI+E FEA
Sbjct: 58 GRDIIGVASTGSGKTAAFALPILQKLWDDPRG------LFACVIAPTRELAYQITEHFEA 111
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +RCA +VGG+D M Q +AL K+PH+VVATPGRL HL NTKGFSL +LK+LVLD
Sbjct: 112 LGSAMGVRCATVVGGIDEMSQAVALAKKPHVVVATPGRLQYHLENTKGFSLRSLKFLVLD 171
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY-- 186
EADRLL+ DF LD+IL VIP+ R TYLFSATMT KV KLQRA L NPV++E + KY
Sbjct: 172 EADRLLDMDFGPILDKILKVIPQERTTYLFSATMTTKVAKLQRASLSNPVRVEVSEKYAP 231
Query: 187 ----------------STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDAT 230
STV TL Q Y F+P KD L+Y+ ++++S ++FTRT
Sbjct: 232 LLLIRLLMRLRVSRRYSTVSTLLQYYLFIPLVQKDVNLMYLANSLASNSIIIFTRTVHDC 291
Query: 231 RLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVI 290
+ LA+M+R LG A+P+ G +SQS RLGAL KFK+G +L+ TDVASRGLDIP VD VI
Sbjct: 292 QRLAIMMRTLGFPAVPLHGQLSQSARLGALGKFKSGGRKVLVATDVASRGLDIPHVDAVI 351
Query: 291 NYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEV 350
NYDIPT+SKDYIHRVGRTARAGR+G +I+ V QY++E +IE + GKKL +P ++EE+
Sbjct: 352 NYDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDVELVQRIESVTGKKLELWPTDKEEI 411
Query: 351 LLLLERVTEAKRISQMTIKDS-----GNKRR 376
LL ERV EA R + +KD G KRR
Sbjct: 412 ALLRERVDEAGRAATNELKDQAKEGRGRKRR 442
>gi|426371743|ref|XP_004052801.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Gorilla gorilla gorilla]
Length = 406
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/400 (55%), Positives = 279/400 (69%), Gaps = 63/400 (15%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+K
Sbjct: 235 VEKLQQYYIFIPSKFK-------------------------------------------- 250
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
SKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 251 -----SKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 305
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +
Sbjct: 306 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMEL 365
Query: 369 KDSGNKRRRK---GGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 366 REHGEKKKRSREDAGDNDDTEG-AIGVRNKVAGGKMKKRK 404
>gi|451847806|gb|EMD61113.1| hypothetical protein COCSADRAFT_192893 [Cochliobolus sativus
ND90Pr]
Length = 518
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/364 (56%), Positives = 283/364 (77%), Gaps = 8/364 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKT AF LPILQALLE + + F +L+PTRELA QI++Q +A
Sbjct: 126 GRDVIGLAETGSGKTAAFVLPILQALLEKQQ------SLFGLILAPTRELAYQIAQQVDA 179
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I+++CA LVGG+DM+ Q +AL K+PHI+VATPGRL+DHL NTKGFSL LKY+VLD
Sbjct: 180 LGSIINVKCATLVGGMDMVPQAIALSKKPHIIVATPGRLLDHLENTKGFSLKHLKYMVLD 239
Query: 129 EADRLLNDDFEKSLDEILNVIPRM-RQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKY 186
EADRLL+ DF LD+IL V+PR R TYL+SATM+ KV+ LQRA L+NPV++ ++S +
Sbjct: 240 EADRLLDLDFGPVLDKILKVLPREGRHTYLYSATMSSKVESLQRAALQNPVRVSISSSSH 299
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
V TL Q+Y F+P KYKD YL+++L + T++F+RT + T+ +A++LR LG AIP
Sbjct: 300 QVVSTLLQRYIFLPHKYKDLYLIHLLNDNIGHPTIIFSRTVNETQRIAILLRTLGFGAIP 359
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
+ G +SQS RLGALNKFK +IL+ TDVA+RGLDIP+VD+V+N+D+P++S+ Y+HRVG
Sbjct: 360 LHGQLSQSARLGALNKFKTQSRDILVATDVAARGLDIPAVDLVVNFDLPSDSQTYVHRVG 419
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQM 366
RTARAG++G A+S V QY+LE +L+IE +GK++PE ++E ++ +ERV EA+RI+
Sbjct: 420 RTARAGKSGKAVSFVTQYDLEIWLRIENALGKQIPEEVINKDEAMVYMERVNEAQRIAVR 479
Query: 367 TIKD 370
+KD
Sbjct: 480 EMKD 483
>gi|41327776|ref|NP_957518.1| probable ATP-dependent RNA helicase DDX47 isoform 2 [Homo sapiens]
gi|119616689|gb|EAW96283.1| hCG27698, isoform CRA_c [Homo sapiens]
Length = 406
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/400 (55%), Positives = 279/400 (69%), Gaps = 63/400 (15%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+K
Sbjct: 235 VEKLQQYYIFIPSKFK-------------------------------------------- 250
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
SKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 251 -----SKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 305
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +
Sbjct: 306 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMEL 365
Query: 369 KDSGNKRRRK---GGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 366 REHGEKKKRSREDAGDNDDTEG-AIGVRNKVAGGKMKKRK 404
>gi|402885240|ref|XP_003906072.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Papio anubis]
Length = 406
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/400 (55%), Positives = 279/400 (69%), Gaps = 63/400 (15%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+K
Sbjct: 235 VEKLQQYYIFIPSKFK-------------------------------------------- 250
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
SKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 251 -----SKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 305
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +
Sbjct: 306 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLAERVAEAQRFARMEL 365
Query: 369 KDSGNKRRRK---GGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 366 REHGEKKKRSREDAGDNDDTEG-AIGVRNKVAGGKMKKRK 404
>gi|344234177|gb|EGV66047.1| hypothetical protein CANTEDRAFT_129471 [Candida tenuis ATCC 10573]
gi|344234178|gb|EGV66048.1| ATP-dependent rRNA helicase RRP3 [Candida tenuis ATCC 10573]
Length = 485
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/382 (56%), Positives = 276/382 (72%), Gaps = 11/382 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKD+IGLAQTGSGKT AFA+PILQAL +F+ VL+PTRELA QI E F+
Sbjct: 109 AGKDIIGLAQTGSGKTAAFAIPILQALWHAKT------PYFSLVLAPTRELAFQIKETFD 162
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
ALGS + LR +VGG+DMM Q L ++PH++VATPGR+ DHL +TKGFSL LKYLV+
Sbjct: 163 ALGSSMGLRSVCIVGGMDMMDQARDLMRKPHVIVATPGRITDHLEHTKGFSLKNLKYLVM 222
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADRLL+ DF +LD+IL VIP R +YLFSATMT K+ KLQRA LKNPV++ ++KY
Sbjct: 223 DEADRLLDMDFGPALDKILKVIPVERTSYLFSATMTNKIAKLQRASLKNPVRVAVSNKYQ 282
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
T D L Q V YK+ +LV++L E S +VFTRT + A++ R LG ++P+
Sbjct: 283 TADNLVQSMMLVSDGYKNTFLVHLLNEFMGKSIIVFTRTVANSERTAILTRLLGFSSVPL 342
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
+G +SQ++RLGALNKFK+G+ NILI TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGR
Sbjct: 343 NGQLSQTQRLGALNKFKSGKANILIATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGR 402
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLE-----RVTEAKR 362
TARAG++G +ISLV QY+LE YL+IE ++GKKLP+ P+ ++VL L V EA R
Sbjct: 403 TARAGKSGKSISLVTQYDLELYLRIESVLGKKLPKDPSPSKQVLNTLHVHVDRAVAEAIR 462
Query: 363 ISQMTIKDSGNKRRRKGGDEDD 384
+ + GN+ R D ++
Sbjct: 463 QMKDIHERRGNRNHRDNHDREE 484
>gi|260943624|ref|XP_002616110.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238849759|gb|EEQ39223.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 477
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/382 (57%), Positives = 278/382 (72%), Gaps = 9/382 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA TGSGKT AFA+PILQ+L +P ++ VLSPTRELA QI + F+A
Sbjct: 102 GKDVIGLAVTGSGKTAAFAIPILQSLW-----HDQLP-YYCLVLSPTRELAYQIKDTFDA 155
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSG+ LR +VGG+DMM Q L ++PH++VATPGR++DHL +TKGFSL LKYLV+D
Sbjct: 156 LGSGMGLRACCIVGGMDMMDQARDLMRKPHVIVATPGRIVDHLEHTKGFSLKNLKYLVMD 215
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF LD+IL VIPR R TYLFSATMT K++KLQRA L NPV+I +SKY T
Sbjct: 216 EADRLLDLDFGPELDKILRVIPRERNTYLFSATMTNKIEKLQRASLNNPVRIAVSSKYQT 275
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
D L Q V YK+ YLV++L E S ++FTRTC ++ AL+ R LG A+P+
Sbjct: 276 ADNLVQSMMLVSDGYKNTYLVHLLNEFVGKSIIIFTRTCAHSQRTALLARILGFSAVPLH 335
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS+RLG+LNKFK+G+ NIL+ TDVA+RGLDIP+VD+VINYDIPT+SK YIHRVGRT
Sbjct: 336 GQLSQSQRLGSLNKFKSGKANILVATDVAARGLDIPAVDVVINYDIPTDSKAYIHRVGRT 395
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +ISLV QY+LE YL+IE ++ KKLP+ PA ++VL L R + I
Sbjct: 396 ARAGRSGKSISLVTQYDLEMYLRIEAVLQKKLPKDPAPPKDVLDALH--VHVDRATAEAI 453
Query: 369 KDSGNKRRRKGGDED-DDIGRQ 389
K + + +KG + DD R+
Sbjct: 454 KQTKDFHEKKGKKKSRDDADRE 475
>gi|109095726|ref|XP_001086008.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Macaca mulatta]
Length = 406
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/400 (55%), Positives = 279/400 (69%), Gaps = 63/400 (15%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+K
Sbjct: 235 VEKLQQYYIFIPSKFK-------------------------------------------- 250
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
SKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 251 -----SKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 305
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +
Sbjct: 306 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLAERVAEAQRFARMEL 365
Query: 369 KDSGNKRRRK---GGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 366 REHGEKKKRSREDAGDNDDTEG-AIGVRNKVAGGKMKKRK 404
>gi|321464143|gb|EFX75153.1| hypothetical protein DAPPUDRAFT_226459 [Daphnia pulex]
Length = 447
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/362 (58%), Positives = 270/362 (74%), Gaps = 21/362 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAF LP+L +LL + QR F +L+PTRELA QISEQ EA
Sbjct: 62 GRDVIGLAETGSGKTGAFTLPMLHSLL--SNPQR----LFGLILTPTRELAFQISEQIEA 115
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+DM+ Q+L L K+PHIV+ATPGRL+DHL NTKGF+L +LKYL
Sbjct: 116 LGSSIGVKCAVIVGGIDMISQSLMLAKKPHIVIATPGRLVDHLENTKGFNLKSLKYL--- 172
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
+D+IL IPR R+T LFSATMT KV+KLQRA L NPV+++ +SKY T
Sbjct: 173 ------------EVDKILKSIPRERRTLLFSATMTSKVQKLQRASLVNPVRVQISSKYQT 220
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD L Q Y F+P K KD YLV++L E + S MVF TC +T +L+LR LG A+P+
Sbjct: 221 VDKLLQYYVFIPLKMKDVYLVHLLNEAAGHSVMVFCSTCSSTLRTSLLLRALGISAVPLH 280
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M+Q+KRL ALNKFKA +L+ TDVASRGLDIP VD VINYDIPT+SKDYIHRVGRT
Sbjct: 281 GQMTQNKRLAALNKFKARNRGVLLATDVASRGLDIPHVDWVINYDIPTHSKDYIHRVGRT 340
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AIS V QY++E Y +IE L+GK+LP + EE +V+ L ERV EA+R+++M +
Sbjct: 341 ARAGRSGKAISFVTQYDVELYQRIEHLLGKQLPLYGLEEGDVMSLQERVAEAQRVAKMDL 400
Query: 369 KD 370
++
Sbjct: 401 RE 402
>gi|171691382|ref|XP_001910616.1| hypothetical protein [Podospora anserina S mat+]
gi|170945639|emb|CAP71752.1| unnamed protein product [Podospora anserina S mat+]
Length = 490
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/371 (56%), Positives = 284/371 (76%), Gaps = 7/371 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IG+A+TGSGKT AFALPILQALL+ + FA VL+PTRELA QI++ FEAL
Sbjct: 100 RDIIGIAETGSGKTAAFALPILQALLDKPQ------PLFALVLAPTRELAAQIAQSFEAL 153
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GS I+LRCA+L+GG+DM+QQ +ALGK+PH+VVATPGRL+DHL TKGFSL L+Y V+DE
Sbjct: 154 GSLINLRCALLLGGLDMVQQAIALGKKPHVVVATPGRLLDHLEKTKGFSLRNLRYCVMDE 213
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYST 188
ADRLL+ DF L++IL +PR R+T+LFSATM+ KV+ LQRA L++P+K+ + SKY T
Sbjct: 214 ADRLLDMDFGPILEKILKFLPRERRTFLFSATMSSKVESLQRASLRDPLKVNVSTSKYQT 273
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Y F+P +KD Y +Y+ E + + +VFTRT T+ +A++LR LG AIP+
Sbjct: 274 VSTLVSNYLFIPHIHKDTYFIYLCNEFAGKTMIVFTRTVLETQRIAILLRTLGMGAIPLH 333
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS RLGAL+KF+AG NIL+ TDVA+RGLDIP+VD VINYD+P +SK YIHRVGRT
Sbjct: 334 GGLSQSARLGALSKFRAGTRNILVATDVAARGLDIPNVDCVINYDLPQDSKTYIHRVGRT 393
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG++G A+S+V QY+LE + +IE +G KL E+ E++EV++ RV EA+R ++ +
Sbjct: 394 ARAGKSGHALSIVTQYDLEIWTRIEAALGTKLTEYAYEKDEVMVFKPRVEEAQRHARNEM 453
Query: 369 KDSGNKRRRKG 379
K+ + R +KG
Sbjct: 454 KNLIDDRGKKG 464
>gi|392578929|gb|EIW72056.1| hypothetical protein TREMEDRAFT_41472 [Tremella mesenterica DSM
1558]
Length = 491
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/363 (59%), Positives = 276/363 (76%), Gaps = 6/363 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLAQTGSGKT AF+LPILQ L E + FFA +L+PTRELA QIS+Q +
Sbjct: 83 GRDVIGLAQTGSGKTAAFSLPILQKLWENPQ------PFFALILAPTRELAYQISQQVTS 136
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R AV+VGG+DMM Q++AL KRPH++VATPGRLMDHL NTKGFSL +K+LV+D
Sbjct: 137 LGSPLGVRTAVIVGGMDMMSQSIALSKRPHVIVATPGRLMDHLENTKGFSLKNVKFLVMD 196
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +D+IL VIP+ R TYLFSATMT KV KLQRA L PV++E A+KYST
Sbjct: 197 EADRLLDMDFGPIIDKILKVIPKERNTYLFSATMTTKVAKLQRASLNKPVRVEVATKYST 256
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y +P K KD +L+YI+TE+S+ S ++FTRT + L++MLR LG AIP+
Sbjct: 257 VSTLLQHYLLLPLKAKDTHLLYIVTELSSCSMIIFTRTVVDAQRLSIMLRRLGFPAIPLH 316
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQS RL +LNKFK+G +IL+ TDVASRGLDIP VD+V+NYD+P NSKDY+HRVGRT
Sbjct: 317 GQMSQSLRLASLNKFKSGGRSILVATDVASRGLDIPLVDLVVNYDMPINSKDYVHRVGRT 376
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I++V QY++E +IE IGKK+ F ++E V E V A R + + +
Sbjct: 377 ARAGRSGKSITMVTQYDVEILQRIEAHIGKKMENFAVDKEAVAAFSETVARANREAALEM 436
Query: 369 KDS 371
++S
Sbjct: 437 RES 439
>gi|396459541|ref|XP_003834383.1| hypothetical protein LEMA_P060520.1 [Leptosphaeria maculans JN3]
gi|312210932|emb|CBX91018.1| hypothetical protein LEMA_P060520.1 [Leptosphaeria maculans JN3]
Length = 516
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/364 (57%), Positives = 280/364 (76%), Gaps = 8/364 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKT AF LPILQALL+ + A F +L+PTRELA QI++Q +A
Sbjct: 124 GRDVIGLAETGSGKTAAFVLPILQALLDKPQ------ALFGLILAPTRELAYQIAQQVDA 177
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I+++CA LVGG+DM+ Q +AL KRPHIVVATPGRL+DHL NTKGFSL LKY+VLD
Sbjct: 178 LGSIINVKCATLVGGMDMVPQAIALSKRPHIVVATPGRLLDHLENTKGFSLKHLKYMVLD 237
Query: 129 EADRLLNDDFEKSLDEILNVIPR-MRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKY 186
EADRLL+ DF LD+IL V+PR R TYLFSATM+ KV+ LQRA L+NPV++ ++S +
Sbjct: 238 EADRLLDLDFGPVLDKILRVLPRDGRHTYLFSATMSSKVESLQRAALQNPVRVSISSSSH 297
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
V TL Q+Y F+P K+KD YL+++LT+ T++FTRT + T +A++LR LG AIP
Sbjct: 298 QVVSTLLQRYLFIPHKHKDLYLIHLLTDNIGHPTIIFTRTVNETERIAILLRALGFGAIP 357
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
+ G +SQS RLGALNKFK +IL+ TDVASRGLDIP+VD+V+N D+P++S+ Y+HRVG
Sbjct: 358 LHGQLSQSARLGALNKFKTKSRDILVATDVASRGLDIPAVDLVVNLDLPSDSQTYVHRVG 417
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQM 366
RTARAG++G A S V QY++E +L+IE +GKK+ E +++E L +E V+EA+R++
Sbjct: 418 RTARAGKSGKAFSFVTQYDVEIWLRIEHALGKKIEEEVVDKDEALQYMESVSEAQRVAIR 477
Query: 367 TIKD 370
+KD
Sbjct: 478 EMKD 481
>gi|255722942|ref|XP_002546405.1| ATP-dependent rRNA helicase RRP3 [Candida tropicalis MYA-3404]
gi|240130922|gb|EER30484.1| ATP-dependent rRNA helicase RRP3 [Candida tropicalis MYA-3404]
Length = 483
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/381 (56%), Positives = 273/381 (71%), Gaps = 12/381 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKT AFA+PILQ+L + +F VL+PTRELA QI E F+A
Sbjct: 105 GKDIIGLAQTGSGKTAAFAIPILQSLWHAQQ------PYFGLVLAPTRELAFQIKETFDA 158
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + LR + +VGG+DMM Q L ++PHI+VATPGR+MDHL +TKGF+L LKYLV+D
Sbjct: 159 LGSSMGLRSSCIVGGMDMMDQARDLMRKPHIIVATPGRIMDHLEHTKGFTLKNLKYLVMD 218
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +LD+IL VIP R TYLFSATMT K++KLQRA L NPV++ +SKY T
Sbjct: 219 EADRLLDMDFGPALDKILKVIPTKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSSKYQT 278
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
D L Q V YK+ L+++L E + S +VFTRT + AL+ R LG A+P+
Sbjct: 279 ADNLVQSMMLVNDGYKNTILIHLLNEFMSKSIIVFTRTVAHAQRTALLARILGFNAVPLH 338
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS+RLG+LNKFK+ NILI TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRT
Sbjct: 339 GQLSQSQRLGSLNKFKSNTANILIATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRT 398
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLE-RVTEA-----KR 362
ARAGR+G +ISL+ QY+LE YL+IE ++G KLP+ +EVL L V +A ++
Sbjct: 399 ARAGRSGKSISLITQYDLEMYLRIESVLGYKLPKEDKPPKEVLDALHIHVDKATAEAIRQ 458
Query: 363 ISQMTIKDSGNKRRRKGGDED 383
++ K GN RRR D D
Sbjct: 459 TKELHEKRGGNNRRRNKDDAD 479
>gi|223999113|ref|XP_002289229.1| atp-depedent helicase [Thalassiosira pseudonana CCMP1335]
gi|220974437|gb|EED92766.1| atp-depedent helicase [Thalassiosira pseudonana CCMP1335]
Length = 435
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/365 (60%), Positives = 278/365 (76%), Gaps = 8/365 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTG+FA+PIL LLE + Q FA +L+PTRELA QI E A
Sbjct: 76 GRDVIGLAETGSGKTGSFAIPILNYLLEKPQKQ-----VFAVILAPTRELAFQIHEVMVA 130
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG G+ +VGGVDM Q +AL + PH+VVATPGRL+DHL NTKGF L +KYLV+D
Sbjct: 131 LGRGMGANSVCVVGGVDMASQAIALARNPHVVVATPGRLLDHLQNTKGFHLRQIKYLVMD 190
Query: 129 EADRLLNDDFEKSLDEILNVIP---RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADR+L+ DFEK ++EIL VIP + R+T LFSATMT KV+KLQRA L +PV++E ++K
Sbjct: 191 EADRMLSMDFEKEINEILEVIPDCEKGRRTMLFSATMTSKVEKLQRASLVDPVRVEVSTK 250
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+ T L Q Y F+PAKYKDCYL Y++ E + S +VF TC+ + LALMLRNLG AI
Sbjct: 251 FQTPKKLLQNYLFIPAKYKDCYLTYLINEHAGQSILVFGATCNNVQRLALMLRNLGFPAI 310
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ KRLGAL KFK+G +ILICTDVASRGLDIPSVD+VIN+D+P + KDYIHRV
Sbjct: 311 CLHGQMSQPKRLGALTKFKSGGRDILICTDVASRGLDIPSVDVVINFDLPGHGKDYIHRV 370
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
GRTARAGR+G AI++V QY++E Y ++E L+G +LPE+ EEEVLLLLERV +A+R++
Sbjct: 371 GRTARAGRSGKAIAMVTQYDVEVYQRLEHLLGHRLPEYKLAEEEVLLLLERVNDAQRLAT 430
Query: 366 MTIKD 370
+K+
Sbjct: 431 RELKE 435
>gi|119616690|gb|EAW96284.1| hCG27698, isoform CRA_d [Homo sapiens]
Length = 392
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/331 (61%), Positives = 262/331 (79%), Gaps = 8/331 (2%)
Query: 78 AVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDD 137
AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN D
Sbjct: 61 AVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMD 120
Query: 138 FEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYR 197
FE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y
Sbjct: 121 FETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 180
Query: 198 FVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRL 257
F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRL
Sbjct: 181 FIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRL 240
Query: 258 GALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVA 317
G+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G A
Sbjct: 241 GSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKA 300
Query: 318 ISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRR 377
I+ V QY++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +++ G K++R
Sbjct: 301 ITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMELREHGEKKKR 360
Query: 378 K---GGDEDDDIGRQFGINKK----KLSKRK 401
GD DD G G+ K K+ KRK
Sbjct: 361 SREDAGDNDDTEG-AIGVRNKVAGGKMKKRK 390
>gi|393245773|gb|EJD53283.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 463
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/363 (57%), Positives = 271/363 (74%), Gaps = 6/363 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG D+IG+A+TGSGKT AFALPILQ L E + R + FAC ++PTRELA QI++ FE
Sbjct: 61 AGHDIIGVAETGSGKTAAFALPILQKLWE---DPRPL---FACCIAPTRELAFQIAQSFE 114
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
ALG + +R AV++GGV ++Q +AL KRPHI+VA PGRL HL NTKGFSL TLKYLVL
Sbjct: 115 ALGGSLGVRVAVIIGGVKEIEQQIALSKRPHIIVAAPGRLNWHLENTKGFSLRTLKYLVL 174
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADRLL+ DF K +D++L V+P+ R TYLFSATMT KV+KLQRA L NP ++ +SKYS
Sbjct: 175 DEADRLLDLDFGKDIDKLLKVLPKERHTYLFSATMTDKVEKLQRASLSNPKRVAVSSKYS 234
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y VP K+ L+Y+ ++ S ++FTRT + ++++LR LG A+P+
Sbjct: 235 TVSTLLQYYLLVPLPQKEVNLIYLCNSLAEKSIIIFTRTQHDAQRVSIILRTLGFSAVPL 294
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL KFKAG IL+ TDVASRGLDIP VD+VINYD+PTNSKDYIHRVGR
Sbjct: 295 HGALSQSARLGALAKFKAGGRKILVATDVASRGLDIPHVDIVINYDVPTNSKDYIHRVGR 354
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAGR G +++ V QY++E + + E +IGK++ +P E+ EV +L +RV EA R++
Sbjct: 355 TARAGRAGKSVTFVTQYDVEVFKRTEAVIGKEMDAWPVEKAEVEVLRQRVEEAARLAAKE 414
Query: 368 IKD 370
++D
Sbjct: 415 LRD 417
>gi|301610484|ref|XP_002934776.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Xenopus (Silurana) tropicalis]
Length = 399
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/367 (57%), Positives = 267/367 (72%), Gaps = 55/367 (14%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPILQ LLE + +A VL+PTRELA QISEQFEA
Sbjct: 56 GRDIIGLAETGSGKTGAFALPILQTLLESPQR------LYALVLTPTRELAFQISEQFEA 109
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+DMM Q+LAL K+PH+V+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 110 LGSTIGVKSAVIVGGIDMMSQSLALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMD 169
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LK+PVK +SKY T
Sbjct: 170 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKDPVKCAVSSKYQT 229
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+K+
Sbjct: 230 VEKLQQFYVFIPSKFKN------------------------------------------- 246
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
KRLG+LNKFKA +IL+ TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVGRT
Sbjct: 247 ------KRLGSLNKFKAKSRSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRT 300
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V+QY++E + +IE LIGKKLP FP +EEEV++L ERV+EA+R +++ +
Sbjct: 301 ARAGRSGKAITFVSQYDVELFQRIEHLIGKKLPAFPTQEEEVMMLNERVSEAQRFARIEL 360
Query: 369 KDSGNKR 375
++ G K+
Sbjct: 361 REHGEKK 367
>gi|241959442|ref|XP_002422440.1| ATP-dependent rRNA helicase, putative; ribosomal RNA-processing
protein, putative [Candida dubliniensis CD36]
gi|223645785|emb|CAX40447.1| ATP-dependent rRNA helicase, putative [Candida dubliniensis CD36]
Length = 499
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/343 (60%), Positives = 259/343 (75%), Gaps = 6/343 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKT AFA+PILQ+L + +FA VL+PTRELA QI + F+A
Sbjct: 123 GKDIIGLAQTGSGKTAAFAIPILQSLWHAQQ------PYFALVLAPTRELAFQIKDTFDA 176
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + LR + +VGG+DMM Q L ++PHI+VATPGR+MDHL +TKGFSL LKYLV+D
Sbjct: 177 LGSSMGLRSSCIVGGMDMMDQARDLMRKPHIIVATPGRIMDHLEHTKGFSLKNLKYLVMD 236
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +LD+IL VIP R TYLFSATMT K++KLQRA L NPVK+ +SKY T
Sbjct: 237 EADRLLDMDFGPALDKILKVIPIKRITYLFSATMTNKIEKLQRASLHNPVKVSVSSKYQT 296
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
D L Q V YK+ L+++L E S +VFTRT + AL+ R LG A+P+
Sbjct: 297 ADNLIQSMMLVNDGYKNTILIHLLNEFIGKSIIVFTRTVAHAQRTALLARILGFNAVPLH 356
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS+RLG+LNKFK+ + NIL+ TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRT
Sbjct: 357 GQLSQSQRLGSLNKFKSNQANILVATDVAARGLDIPSVDIVINYDIPTDSKAYIHRVGRT 416
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 351
ARAGR+G +ISL+ QY+LE YL+IE ++GKKLP+ +E+L
Sbjct: 417 ARAGRSGKSISLITQYDLEMYLRIENVLGKKLPKEDKPPKEIL 459
>gi|242222657|ref|XP_002477039.1| predicted protein [Postia placenta Mad-698-R]
gi|220723636|gb|EED77767.1| predicted protein [Postia placenta Mad-698-R]
Length = 389
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/340 (60%), Positives = 257/340 (75%), Gaps = 6/340 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+A TGSGKT AFALPILQ L E + FAC+++PTRELA QIS+Q EA
Sbjct: 56 GRDIIGVASTGSGKTAAFALPILQKLWEEPKG------LFACIMAPTRELAYQISQQIEA 109
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +RC LVGG+D M Q +AL KRPHIVVATPGRL DHL +TKGFSL LK+LVLD
Sbjct: 110 LGSAMGVRCVTLVGGMDKMAQAVALAKRPHIVVATPGRLNDHLEDTKGFSLRGLKFLVLD 169
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +D+IL IPR R TYLFSATMT KV KLQRA L NPV++E + KYST
Sbjct: 170 EADRLLDMDFGPIIDKILKAIPRERTTYLFSATMTTKVAKLQRASLSNPVRVEVSEKYST 229
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y F+P KD +L+Y+ ++ +S ++FTRT + L+++LR LG A+P+
Sbjct: 230 VSTLLQYYLFIPLVQKDVHLIYLANILAQNSIIIFTRTVHDAQRLSIILRTLGFPAVPLH 289
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS RLGAL KFK+G +L+ TDVASRGLDIP VD+VINYDIPT+SKDYIHRVGRT
Sbjct: 290 GQLSQSARLGALGKFKSGGRKVLVATDVASRGLDIPHVDVVINYDIPTHSKDYIHRVGRT 349
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEE 348
ARAGR+G +I+LV QY++E +IE IGKK+ +P + E
Sbjct: 350 ARAGRSGKSITLVTQYDVELIQRIETTIGKKMELWPTDAE 389
>gi|255935375|ref|XP_002558714.1| Pc13g02750 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583334|emb|CAP91344.1| Pc13g02750 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 493
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/355 (57%), Positives = 274/355 (77%), Gaps = 7/355 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKT +F LPILQAL+E ++ FF VL+PTRELA QIS E+
Sbjct: 108 GRDIIGLAETGSGKTASFVLPILQALMEKPQS------FFGLVLAPTRELAYQISLACES 161
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ I++R LVGG+DM+ Q++ALGK+PHI+VATPGRL+DHL NTKGFSL +LK+LV+D
Sbjct: 162 LGATINVRSTTLVGGMDMVPQSIALGKKPHIIVATPGRLLDHLENTKGFSLRSLKFLVMD 221
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYS 187
EADRLL+ DF LD+IL V+PR R+T+LFSAT++ KV+ LQRA L NP ++ ++SKY+
Sbjct: 222 EADRLLDMDFGPILDKILKVLPRERRTFLFSATLSSKVESLQRASLSNPARVSISSSKYA 281
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV+TL+Q Y P K+KD YLVY+L E S ++F RT T+ +A +LR LG AIP+
Sbjct: 282 TVETLQQTYLLRPYKHKDIYLVYLLHEFIGQSVIIFMRTVHETQRVAFLLRGLGFGAIPL 341
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G MSQS RLGAL KF++ IL+ TDVA+RGLDIPSVD V+N+D+PT+SK YIHRVGR
Sbjct: 342 HGQMSQSARLGALGKFRSKSREILVATDVAARGLDIPSVDCVLNFDLPTDSKTYIHRVGR 401
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
TARAG++G AIS V QY++E + +IE +GK+L E+PA ++E ++ E+V+ ++R
Sbjct: 402 TARAGKSGTAISFVTQYDVEIWQRIEAAMGKELAEYPAPKDEAMVFAEQVSASQR 456
>gi|219123243|ref|XP_002181938.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406539|gb|EEC46478.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 433
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/362 (55%), Positives = 274/362 (75%), Gaps = 5/362 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAF LPILQ LL ++ V A +L+PTRELA QI + +
Sbjct: 76 GRDIIGLAETGSGKTGAFCLPILQGLL-----RKPVKGTAALILTPTRELAFQILQVVQG 130
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + +VGGVD Q +ALG+ PH+V+ATPGRL+DHL +TKGF+L ++YLVLD
Sbjct: 131 LGQAMGATAVCVVGGVDRTSQAIALGRNPHVVIATPGRLLDHLKDTKGFNLNKVRYLVLD 190
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ DFE+ L +IL+ +P RQT LFSATMT +V KL+RA LK+PVK++ ++K+ T
Sbjct: 191 EADRMLSMDFEEELHQILDNMPEQRQTLLFSATMTTQVAKLERASLKDPVKVQVSTKFQT 250
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
L Q Y F+PAKYKDCYL Y++ E + S +VF TC+ + LALMLRNLG A+ +
Sbjct: 251 PKQLLQSYLFIPAKYKDCYLTYLINEHAGQSILVFGATCNNVQRLALMLRNLGFPAVCLH 310
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M QSKRLGAL KF +G+ IL+CTDVASRGLD+P VD+VIN+D+P + K+YIHRVGRT
Sbjct: 311 GQMDQSKRLGALQKFSSGDRTILLCTDVASRGLDLPQVDLVINFDLPGHGKEYIHRVGRT 370
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG++G AI++V QY++E Y ++E L+GKKL E+ +E+ VL+LLERV++A+R++ +
Sbjct: 371 ARAGKSGRAIAMVTQYDVEVYQRLEALLGKKLDEWKTDEKTVLVLLERVSDAQRMATREL 430
Query: 369 KD 370
K+
Sbjct: 431 KE 432
>gi|327272752|ref|XP_003221148.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Anolis carolinensis]
Length = 399
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/398 (54%), Positives = 276/398 (69%), Gaps = 57/398 (14%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPILQALLE + FFA VL+PTRELA QISEQFEA
Sbjct: 53 GRDIIGLAETGSGKTGAFALPILQALLETPQR------FFALVLTPTRELAFQISEQFEA 106
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+DMM Q+LAL K+PH+++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 107 LGSSIGVQTAVIVGGIDMMAQSLALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMD 166
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LK+PVK +SKY T
Sbjct: 167 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKDPVKCAVSSKYQT 226
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 227 VEKLQQYYVFIPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 286
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M+Q DYIHRVGRT
Sbjct: 287 GQMNQ----------------------------------------------DYIHRVGRT 300
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+ V QY++E + +IE LIGKKLP FP +E+EV++L ERV EA+R ++M +
Sbjct: 301 ARAGRSGKSITFVTQYDVELFQRIEHLIGKKLPAFPTQEDEVMMLTERVAEAQRFARMEL 360
Query: 369 KDSGNKRR-RKGGDEDDDIGRQFGINKK----KLSKRK 401
+ G+K+R R+ +E DD G+ K K KRK
Sbjct: 361 QQKGDKKRSREEANEPDDAEGAMGVRNKVAGGKKKKRK 398
>gi|425769747|gb|EKV08230.1| ATP-dependent RNA helicase , putative [Penicillium digitatum Pd1]
gi|425771396|gb|EKV09840.1| ATP-dependent RNA helicase , putative [Penicillium digitatum PHI26]
Length = 494
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/355 (57%), Positives = 272/355 (76%), Gaps = 7/355 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKT +F LPILQAL+E + FF V++PTRELA QIS E+
Sbjct: 109 GRDIIGLAETGSGKTASFVLPILQALMEKPQ------PFFGLVMAPTRELAYQISLACES 162
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ I++R LVGG+DM+ Q++ALGK+PHI+VATPGRL+DHL NTKGFSL LK+LV+D
Sbjct: 163 LGATINVRSTTLVGGMDMVPQSIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKFLVMD 222
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYS 187
EADRLL+ DF LD+IL V+PR R+T+LFSAT++ KV+ LQRA L NP ++ ++SKY+
Sbjct: 223 EADRLLDMDFGPILDKILKVLPRERRTFLFSATLSSKVESLQRASLSNPARVSISSSKYA 282
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV+TL+Q Y P K+KD YLVY+L E S ++F RT T+ +A +LR LG AIP+
Sbjct: 283 TVETLQQTYILRPYKHKDIYLVYLLHEFIGQSVIIFMRTVHETQRVAFLLRGLGFGAIPL 342
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G MSQS RLGAL KF++ IL+ TDVA+RGLDIPSVD V+N+D+PT+SK YIHRVGR
Sbjct: 343 HGQMSQSARLGALGKFRSKSREILVATDVAARGLDIPSVDCVLNFDLPTDSKTYIHRVGR 402
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
TARAG++G AIS V QY++E + +IE +GK+L EFPA ++E ++ E+V+ ++R
Sbjct: 403 TARAGKSGTAISFVTQYDVEIWQRIEAAMGKELAEFPAPKDEAMVFAEQVSASQR 457
>gi|68473005|ref|XP_719308.1| hypothetical protein CaO19.7546 [Candida albicans SC5314]
gi|46441121|gb|EAL00420.1| hypothetical protein CaO19.7546 [Candida albicans SC5314]
gi|238880344|gb|EEQ43982.1| ATP-dependent rRNA helicase RRP3 [Candida albicans WO-1]
Length = 399
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/343 (59%), Positives = 259/343 (75%), Gaps = 6/343 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKT AFA+PILQ+L + +FA VL+PTRELA QI + F+A
Sbjct: 20 GKDIIGLAQTGSGKTAAFAIPILQSLWHAQQ------PYFALVLAPTRELAFQIKDTFDA 73
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + LR + +VGG+DMM Q L ++PH++VATPGR+MDHL +TKGFSL LKYLV+D
Sbjct: 74 LGSSMGLRSSCIVGGMDMMDQARDLMRKPHVIVATPGRIMDHLEHTKGFSLKNLKYLVMD 133
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +LD+IL VIP R TYLFSATMT K++KLQRA L NPV++ +SKY T
Sbjct: 134 EADRLLDMDFGPALDKILKVIPIKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSSKYQT 193
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
D L Q V YK+ L+++L E S +VFTRT + AL+ R LG A+P+
Sbjct: 194 ADNLVQSMMLVNDGYKNTILIHLLNEFMGKSIIVFTRTVAHAQRTALLARILGFNAVPLH 253
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS+RLG+LNKFK+ + NIL+ TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRT
Sbjct: 254 GQLSQSQRLGSLNKFKSNQANILVATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRT 313
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 351
ARAGR+G +ISL+ QY+LE YL+IE ++GKKLP+ +EVL
Sbjct: 314 ARAGRSGKSISLITQYDLEMYLRIESVLGKKLPKEDKPPKEVL 356
>gi|406603210|emb|CCH45247.1| ATP-dependent rRNA helicase RRP3 [Wickerhamomyces ciferrii]
Length = 488
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/352 (58%), Positives = 263/352 (74%), Gaps = 6/352 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLAQTGSGKT AFA+PILQAL +FA VL+PTRELA QI + F+A
Sbjct: 111 GRDLIGLAQTGSGKTAAFAIPILQALWYAQT------PYFATVLAPTRELAYQIKDTFDA 164
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSG+ LR +VGG+DMM+Q L ++PH++VATPGRLMDHL + KGFSL LK+LV+D
Sbjct: 165 LGSGMGLRSVCIVGGMDMMEQARDLMRKPHVIVATPGRLMDHLEHLKGFSLRALKFLVMD 224
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ +F LD+I VIPR R TYLFSATMT K+ KLQRA L NPVK+ + +YST
Sbjct: 225 EADRLLDMEFGPVLDKIFKVIPRERTTYLFSATMTNKIDKLQRASLTNPVKVSVSDRYST 284
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTL Q VP K+ YL+Y+L + S ++FTRTC ++ AL+ R LG A+P+
Sbjct: 285 VDTLIQSMMIVPDGQKNTYLIYLLNQFEGKSIIIFTRTCAHSQRTALLSRILGFSAVPLH 344
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G ++QS+RL ALN+FK+G+ NIL+ TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRT
Sbjct: 345 GQLTQSQRLSALNRFKSGKTNILVATDVAARGLDIPSVDIVINYDIPTDSKAYIHRVGRT 404
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
ARAGR+G ++SLV QY+LE ++IE +I KLP+ +E+L L + V +A
Sbjct: 405 ARAGRSGKSVSLVTQYDLELLIRIEAIINMKLPKESVNRDEILSLHDYVDKA 456
>gi|254565677|ref|XP_002489949.1| Protein involved in rRNA processing [Komagataella pastoris GS115]
gi|238029745|emb|CAY67668.1| Protein involved in rRNA processing [Komagataella pastoris GS115]
gi|328350360|emb|CCA36760.1| ATP-dependent RNA helicase [Komagataella pastoris CBS 7435]
Length = 478
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/366 (56%), Positives = 271/366 (74%), Gaps = 6/366 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLAQTGSGKT AFA+P+LQ+L E A FF CVL+PTRELA QI E F++
Sbjct: 109 GRDIIGLAQTGSGKTAAFAIPVLQSLYEQAT------PFFCCVLAPTRELAYQIKETFDS 162
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSG+ LR +VGG+DM+ Q L ++PH++VATPGRLMDHL NTKGFSL LKYL++D
Sbjct: 163 LGSGMGLRSVCIVGGMDMIDQAKDLMRKPHVIVATPGRLMDHLENTKGFSLKALKYLIMD 222
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ +F ++D++L +IPR R TYLFSATMT K++KLQRA L +P+K+ +SKYST
Sbjct: 223 EADRLLDLEFGPAIDKVLKLIPRERSTYLFSATMTNKIEKLQRASLVDPIKVSVSSKYST 282
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD+L Q VP YK+ +L+Y+L + S ++FTRTC + AL+ R + AIP+
Sbjct: 283 VDSLIQSLMVVPDGYKNTFLIYLLNKYQNKSIIIFTRTCAHAQRTALLARLMDFSAIPLH 342
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G ++QS+RLGALNKFKA E IL+ TDVA+RGLDIP VD+VIN+DIPT+SK YIHRVGRT
Sbjct: 343 GQLNQSQRLGALNKFKARERTILVATDVAARGLDIPMVDVVINFDIPTDSKAYIHRVGRT 402
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +ISLV QY+LE L++E ++G KLP+ +E+L L V + + I
Sbjct: 403 ARAGRSGRSISLVTQYDLELILRVESVLGMKLPKDVPPRDEILSLHNTVEKFHNEAVRQI 462
Query: 369 KDSGNK 374
K+ N+
Sbjct: 463 KEHQNR 468
>gi|161784286|sp|Q5ACU6.2|RRP3_CANAL RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 539
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/343 (59%), Positives = 258/343 (75%), Gaps = 6/343 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKT AFA+PILQ+L + +FA VL+PTREL QI + F+A
Sbjct: 160 GKDIIGLAQTGSGKTAAFAIPILQSLWHAQQ------PYFALVLAPTRELTFQIKDTFDA 213
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + LR + +VGG+DMM Q L ++PH++VATPGR+MDHL +TKGFSL LKYLV+D
Sbjct: 214 LGSSMGLRSSCIVGGMDMMDQARDLMRKPHVIVATPGRIMDHLEHTKGFSLKNLKYLVMD 273
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +LD+IL VIP R TYLFSATMT K++KLQRA L NPV++ +SKY T
Sbjct: 274 EADRLLDMDFGPALDKILKVIPIKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSSKYQT 333
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
D L Q V YK+ L+++L E S +VFTRT + AL+ R LG A+P+
Sbjct: 334 ADNLVQSMMLVNDGYKNTILIHLLNEFMGKSIIVFTRTVAHAQRTALLARILGFNAVPLH 393
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS+RLG+LNKFK+ + NIL+ TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRT
Sbjct: 394 GQLSQSQRLGSLNKFKSNQANILVATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRT 453
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 351
ARAGR+G +ISL+ QY+LE YL+IE ++GKKLP+ +EVL
Sbjct: 454 ARAGRSGKSISLITQYDLEMYLRIESVLGKKLPKEDKPPKEVL 496
>gi|344303537|gb|EGW33786.1| ATP-dependent rRNA helicase RRP3 [Spathaspora passalidarum NRRL
Y-27907]
Length = 475
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/381 (56%), Positives = 270/381 (70%), Gaps = 11/381 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLAQTGSGKT AFA+PILQAL E +FA VL+PTRELA QI E F+A
Sbjct: 100 GHDIIGLAQTGSGKTAAFAIPILQALWEAQS------PYFALVLAPTRELAFQIKETFDA 153
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + LR +VGG+DMM Q L ++PH++VATPGR+MDHL TKGF L LKYLV+D
Sbjct: 154 LGSTMGLRSVCIVGGMDMMDQARDLMRKPHVIVATPGRIMDHLETTKGFKLKDLKYLVMD 213
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +LD IL VIP R TYLFSATMT K++KLQRA L NPV++ +SKY T
Sbjct: 214 EADRLLDMDFGPALDRILKVIPTKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSSKYQT 273
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
D L Q V YK+ L+++L+E +VFTRT + AL+ R LG A+P+
Sbjct: 274 ADNLVQSMMLVHDGYKNTILIHLLSEYEGKLIIVFTRTVAHAQRTALLCRILGFNAVPLH 333
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQ++RLG+LNKFK+ NILI TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRT
Sbjct: 334 GQLSQAQRLGSLNKFKSRSANILIATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRT 393
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLL----ERVT-EAKRI 363
ARAGR+G +ISL+ QY+LE YL+IE ++GKKLP+ +EVL L +R T EA R
Sbjct: 394 ARAGRSGKSISLITQYDLEMYLRIESVLGKKLPKEDMPPKEVLDALHPNVDRATAEAIRQ 453
Query: 364 SQMTIKDSGNKRRRKGGDEDD 384
++ + G +R R D ++
Sbjct: 454 TKELHEKRGKRRNRDDADREE 474
>gi|340505836|gb|EGR32122.1| hypothetical protein IMG5_095370 [Ichthyophthirius multifiliis]
Length = 540
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/377 (54%), Positives = 266/377 (70%), Gaps = 22/377 (5%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
KD+I LA+TGSGKT +FALPILQ L ++A +LSPTREL +QISE FE L
Sbjct: 161 KDIIALAETGSGKTLSFALPILQQFLNQPH------EYYALILSPTRELCVQISESFENL 214
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHI----------------VVATPGRLMDHLTN 113
G L+ V+VGG+D ++Q +AL K PHI VV TPGR+ H N
Sbjct: 215 GKEFGLKVVVIVGGLDPIKQMIALSKNPHISIYYNIIYIYIYLYILVVGTPGRIQYHFQN 274
Query: 114 TKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRAC 173
TKGF + LK+LVLDEAD+LLN DFE +++IL+ IP+ R T+LFSATMT KV KLQ+
Sbjct: 275 TKGFQMNNLKFLVLDEADKLLNMDFEAEINDILDKIPKERNTFLFSATMTNKVHKLQKVS 334
Query: 174 LKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLL 233
L+NPVKIE ++KY TV TL QQY F+P KYKD YL +IL E SS ++F TC + L
Sbjct: 335 LRNPVKIEVSTKYQTVQTLIQQYCFIPIKYKDSYLAFILNENQGSSCIIFVTTCINSIRL 394
Query: 234 ALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYD 293
LMLRNLG +A+ I G M+Q+KR A+NKFK G+ IL+ TDVASRGLDIP +D+VINY+
Sbjct: 395 TLMLRNLGFQAVSIHGQMNQTKRQTAINKFKDGQKKILVATDVASRGLDIPCIDLVINYE 454
Query: 294 IPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLL 353
+P N+K+YIHRVGRTARAGR G AISL++QY+LE +L+IE L+G K+ ++ EE + L+
Sbjct: 455 LPANTKEYIHRVGRTARAGRKGNAISLISQYDLEAFLKIEDLLGIKIDQYNIEEYKALVF 514
Query: 354 LERVTEAKRISQMTIKD 370
ER+ EA++IS +K+
Sbjct: 515 NERINEAQKISTKQLKE 531
>gi|354548378|emb|CCE45114.1| hypothetical protein CPAR2_701180 [Candida parapsilosis]
Length = 478
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/343 (59%), Positives = 255/343 (74%), Gaps = 6/343 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA TGSGKT AFA+PILQAL +F VL+PTRELA QI + F+A
Sbjct: 105 GKDIIGLAVTGSGKTAAFAIPILQALWHAQT------PYFGLVLAPTRELAFQIKDTFDA 158
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ + LR +VGG+DMM Q L ++PHIVVATPGR+MDHL +TKGFSL LKYLV+D
Sbjct: 159 LGTTMGLRSVCIVGGMDMMDQARDLMRKPHIVVATPGRIMDHLEHTKGFSLKNLKYLVMD 218
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +LD+IL VIP R TYLFSATMT K++KLQRA L NPV++ ++KY T
Sbjct: 219 EADRLLDMDFGPALDKILKVIPPKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSTKYQT 278
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
D L Q V YK+ L+++L E S +VFTRT + AL+ R LG A+P+
Sbjct: 279 ADNLVQSMMLVNDGYKNTILIHLLNEFMGKSIIVFTRTVAHAQRTALLARILGFNAVPLH 338
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQ++RLG+LNKFK+G+ NIL+ TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRT
Sbjct: 339 GQLSQAQRLGSLNKFKSGKANILVATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRT 398
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 351
ARAGR+G +ISL+ QY+LE YL+IE +GKKLP+ +EVL
Sbjct: 399 ARAGRSGKSISLITQYDLEMYLRIENALGKKLPKEDKPSKEVL 441
>gi|60649461|gb|AAH91696.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Rattus norvegicus]
Length = 323
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/321 (62%), Positives = 256/321 (79%), Gaps = 6/321 (1%)
Query: 87 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 146
M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 1 MSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 60
Query: 147 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 206
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 61 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDT 120
Query: 207 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 266
YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA
Sbjct: 121 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAK 180
Query: 267 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 326
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++
Sbjct: 181 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 240
Query: 327 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGD--EDD 384
E + +IE LIGKKLP FP ++EEV++L ERV+EA+R ++M +++ G K++RK D +DD
Sbjct: 241 ELFQRIEHLIGKKLPVFPTQDEEVMMLTERVSEAQRFARMELREHGEKKKRKREDPGDDD 300
Query: 385 DIGRQFGINKK----KLSKRK 401
D G+ K K+ KRK
Sbjct: 301 DTEGAIGVRNKVAGGKMKKRK 321
>gi|294911908|ref|XP_002778095.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239886216|gb|EER09890.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 463
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/363 (54%), Positives = 270/363 (74%), Gaps = 4/363 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLI LA+TGSGKTGAFA+PI+Q LL+ A ++++ +ACVL+PTREL +QI +QFE
Sbjct: 66 GRDLIALAETGSGKTGAFAIPIIQKLLDAAPHRKST---WACVLAPTRELCVQIGQQFEG 122
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ I+L A +VGG+DM+ Q +AL K+PHI+VA+PGRL+DHL NTKGF L T+K+LV+D
Sbjct: 123 LGASINLTTATIVGGLDMVTQAMALSKKPHIIVASPGRLVDHLENTKGFHLKTIKFLVMD 182
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL DFE +L++I+ PR RQT+LFSATMT KV +LQRA L PVK E A K+
Sbjct: 183 EADRLLGMDFEDALNKIVQSCPRDRQTFLFSATMTNKVSQLQRASLTRPVKCEVARKFDV 242
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
L Q Y FVP K+K YL +L S+ M+F TC + +A LR+LG + +
Sbjct: 243 AKGLVQNYMFVPHKHKHAYLAALLAHFKLSTVMIFVDTCLNAQRMATTLRHLGHNCVCLH 302
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M+Q+ RLGALN+F+AG ++L+ TDVA+RGLDIPSVD+VIN+D+P N ++YIHRVGRT
Sbjct: 303 GKMTQTHRLGALNQFRAGTRSVLVATDVAARGLDIPSVDVVINFDVPKNPEEYIHRVGRT 362
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFP-AEEEEVLLLLERVTEAKRISQMT 367
ARAGRTG +++LV QY++E + +IE GKK+ EFP +EE + L E+V EA R +Q+
Sbjct: 363 ARAGRTGRSVTLVTQYDIEPFQRIENKQGKKMEEFPEVKEENAMSLQEKVLEALRSTQLE 422
Query: 368 IKD 370
+++
Sbjct: 423 MRE 425
>gi|448535294|ref|XP_003870949.1| Rrp3 protein [Candida orthopsilosis Co 90-125]
gi|380355305|emb|CCG24822.1| Rrp3 protein [Candida orthopsilosis]
Length = 481
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/343 (58%), Positives = 254/343 (74%), Gaps = 6/343 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA TGSGKT AFA+PILQAL +F VL+PTRELA QI + F+A
Sbjct: 108 GKDIIGLAVTGSGKTAAFAIPILQALWHAQT------PYFGLVLAPTRELAFQIKDTFDA 161
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ + LR +VGG+DMM Q L ++PHI+VATPGR+MDHL +TKGFSL LKYLV+D
Sbjct: 162 LGATMGLRSVCIVGGMDMMDQARDLMRKPHIIVATPGRIMDHLEHTKGFSLKNLKYLVMD 221
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +LD+IL VIP R TYLFSATMT K++KLQRA L NPV++ ++KY T
Sbjct: 222 EADRLLDMDFGPALDKILKVIPPKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSTKYQT 281
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
D L Q V YK+ L+++L E S +VFTRT + AL+ R LG A+P+
Sbjct: 282 ADNLVQSMMLVNDGYKNTILIHLLNEFMGKSIIVFTRTVAHAQRTALLARILGFNAVPLH 341
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQ++RLG+LNKFK+ + NIL+ TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRT
Sbjct: 342 GQLSQAQRLGSLNKFKSSKANILVATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRT 401
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 351
ARAGR+G +ISL+ QY+LE YL+IE +GKKLP+ +EVL
Sbjct: 402 ARAGRSGKSISLITQYDLEMYLRIENALGKKLPKEEKPSKEVL 444
>gi|294942246|ref|XP_002783449.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239895904|gb|EER15245.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 463
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/363 (54%), Positives = 269/363 (74%), Gaps = 4/363 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLI LA+TGSGKTGAFA+PI+Q LL+ A +++ +ACVL+PTREL +QI +QFE
Sbjct: 66 GRDLIALAETGSGKTGAFAIPIIQKLLDAAPHRKLT---WACVLAPTRELCVQIGQQFEG 122
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ I+L A +VGG+DM+ Q ++L K+PHI+VA+PGRL+DHL NTKGF L T+K+LV+D
Sbjct: 123 LGASINLTTATIVGGLDMVTQAMSLSKKPHIIVASPGRLVDHLENTKGFHLKTIKFLVMD 182
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL DFE +L++I+ PR RQT+LFSATMT KV +LQRA L PVK E A K+
Sbjct: 183 EADRLLGMDFEDALNKIVQSCPRDRQTFLFSATMTNKVSQLQRASLTRPVKCEVARKFDV 242
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
L Q Y FVP K+K YL +L S+ M+F TC + +A LR+LG + +
Sbjct: 243 AKGLVQNYMFVPHKHKHAYLAALLAHFKLSTVMIFVDTCLNAQRMATTLRHLGHNCVCLH 302
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M+Q+ RLGALN+F+AG ++L+ TDVA+RGLDIPSVD+VIN+D+P N ++YIHRVGRT
Sbjct: 303 GKMTQTHRLGALNQFRAGTRSVLVATDVAARGLDIPSVDVVINFDVPKNPEEYIHRVGRT 362
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFP-AEEEEVLLLLERVTEAKRISQMT 367
ARAGRTG +++LV QY++E + +IE GKK+ EFP +EE + L E+V EA R +Q+
Sbjct: 363 ARAGRTGRSVTLVTQYDIEPFQRIENKQGKKMEEFPEVKEENAISLQEKVLEALRSTQLE 422
Query: 368 IKD 370
+++
Sbjct: 423 MRE 425
>gi|74143864|dbj|BAE41247.1| unnamed protein product [Mus musculus]
Length = 323
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/322 (62%), Positives = 256/322 (79%), Gaps = 8/322 (2%)
Query: 87 MQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEIL 146
M Q+LAL K+P+IV+ATPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL
Sbjct: 1 MSQSLALAKKPNIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKIL 60
Query: 147 NVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDC 206
VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY TV+ L+Q Y F+P+K+KD
Sbjct: 61 KVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDT 120
Query: 207 YLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 266
YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+ G MSQSKRLG+LNKFKA
Sbjct: 121 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAK 180
Query: 267 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 326
+IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRTARAGR+G AI+ V QY++
Sbjct: 181 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 240
Query: 327 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRK---GGDED 383
E + +IE LIGKKLP FP ++EEV++L ERV EA+R ++M +++ G K++RK GD+D
Sbjct: 241 ELFQRIEHLIGKKLPVFPTQDEEVMMLTERVNEAQRFARMELREHGEKKKRKREDAGDDD 300
Query: 384 DDIGRQFGINKK----KLSKRK 401
D G G+ K K+ KRK
Sbjct: 301 DKEG-AIGVRNKVAGGKMKKRK 321
>gi|301610486|ref|XP_002934777.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 3
[Xenopus (Silurana) tropicalis]
Length = 402
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/367 (55%), Positives = 263/367 (71%), Gaps = 52/367 (14%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPILQ LLE + +A VL+PTRELA QISEQFEA
Sbjct: 56 GRDIIGLAETGSGKTGAFALPILQTLLESPQR------LYALVLTPTRELAFQISEQFEA 109
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+DMM Q+LAL K+PH+V+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 110 LGSTIGVKSAVIVGGIDMMSQSLALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMD 169
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LK+PVK +SKY T
Sbjct: 170 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKDPVKCAVSSKYQT 229
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ +AL+LRNLG AIP+
Sbjct: 230 VEKLQQFYVFIPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRVALLLRNLGFTAIPLH 289
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ DYIHRVGRT
Sbjct: 290 GQMSQ----------------------------------------------DYIHRVGRT 303
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V+QY++E + +IE LIGKKLP FP +EEEV++L ERV+EA+R +++ +
Sbjct: 304 ARAGRSGKAITFVSQYDVELFQRIEHLIGKKLPAFPTQEEEVMMLNERVSEAQRFARIEL 363
Query: 369 KDSGNKR 375
++ G K+
Sbjct: 364 REHGEKK 370
>gi|38566158|gb|AAH62498.1| ddx47-prov protein, partial [Xenopus (Silurana) tropicalis]
Length = 401
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/367 (55%), Positives = 263/367 (71%), Gaps = 52/367 (14%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPILQ LLE + +A VL+PTRELA QISEQFEA
Sbjct: 55 GRDIIGLAETGSGKTGAFALPILQTLLESPQR------LYALVLTPTRELAFQISEQFEA 108
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+DMM Q+LAL K+PH+V+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 109 LGSTIGVKSAVIVGGIDMMSQSLALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMD 168
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LK+PVK +SKY T
Sbjct: 169 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKDPVKCAVSSKYQT 228
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ +AL+LRNLG AIP+
Sbjct: 229 VEKLQQFYVFIPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRVALLLRNLGFTAIPLH 288
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ DYIHRVGRT
Sbjct: 289 GQMSQ----------------------------------------------DYIHRVGRT 302
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V+QY++E + +IE LIGKKLP FP +EEEV++L ERV+EA+R +++ +
Sbjct: 303 ARAGRSGKAITFVSQYDVELFQRIEHLIGKKLPAFPTQEEEVMMLNERVSEAQRFARIEL 362
Query: 369 KDSGNKR 375
++ G K+
Sbjct: 363 REHGEKK 369
>gi|158514834|sp|A3LS22.3|RRP3_PICST RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 484
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/379 (54%), Positives = 268/379 (70%), Gaps = 9/379 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKT AFA+PILQ+L E +F VL+P RELA QI E F+A
Sbjct: 108 GKDIIGLAQTGSGKTAAFAIPILQSLWEAQT------PYFGLVLAPARELAYQIKETFDA 161
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R LVGG+DMM Q L ++PHI++ATPGR+MDHL +TKGFSL LKY V+D
Sbjct: 162 LGSTMGVRTVCLVGGMDMMDQARDLMRKPHIIIATPGRIMDHLEHTKGFSLKMLKYFVMD 221
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD+LL+ +F LD+IL IP R TYLFSATMT K++KLQRA L NPV++ +SKY T
Sbjct: 222 EADKLLDLEFGPVLDKILKQIPSKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSSKYQT 281
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
D L Q V YK+ YL+++L E S ++F RT T+ +++ R LG A+P+
Sbjct: 282 ADNLIQSMMLVSDGYKNTYLIHLLNEFVGKSIIIFARTRAHTQRTSILCRILGFSAVPLH 341
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G ++Q++RLG+LNKFK+G NILI TDVA+RGLDIPSVD+VINYDIPT+SK Y+HRVGRT
Sbjct: 342 GDLTQAQRLGSLNKFKSGTANILIATDVAARGLDIPSVDVVINYDIPTDSKAYVHRVGRT 401
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTE---AKRISQ 365
ARAGR+G +ISLV QY+LE YL+IE+ I KKLP+ P+ + +L L + A+ I Q
Sbjct: 402 ARAGRSGKSISLVTQYDLEMYLRIEQSIQKKLPKDPSPPKAMLDALHVHVDRAYAEAIRQ 461
Query: 366 MTIKDSGNKRRRKGGDEDD 384
+R R+G D+ D
Sbjct: 462 TKEFHEKTRRGRRGKDDKD 480
>gi|150864621|ref|XP_001383517.2| ATP-dependent rRNA helicase RRP3 [Scheffersomyces stipitis CBS
6054]
gi|149385877|gb|ABN65488.2| ATP-dependent rRNA helicase RRP3 [Scheffersomyces stipitis CBS
6054]
Length = 396
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/379 (54%), Positives = 268/379 (70%), Gaps = 9/379 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKT AFA+PILQ+L E +F VL+P RELA QI E F+A
Sbjct: 20 GKDIIGLAQTGSGKTAAFAIPILQSLWEAQT------PYFGLVLAPARELAYQIKETFDA 73
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R LVGG+DMM Q L ++PHI++ATPGR+MDHL +TKGFSL LKY V+D
Sbjct: 74 LGSTMGVRTVCLVGGMDMMDQARDLMRKPHIIIATPGRIMDHLEHTKGFSLKMLKYFVMD 133
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD+LL+ +F LD+IL IP R TYLFSATMT K++KLQRA L NPV++ +SKY T
Sbjct: 134 EADKLLDLEFGPVLDKILKQIPSKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSSKYQT 193
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
D L Q V YK+ YL+++L E S ++F RT T+ +++ R LG A+P+
Sbjct: 194 ADNLIQSMMLVSDGYKNTYLIHLLNEFVGKSIIIFARTRAHTQRTSILCRILGFSAVPLH 253
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G ++Q++RLG+LNKFK+G NILI TDVA+RGLDIPSVD+VINYDIPT+SK Y+HRVGRT
Sbjct: 254 GDLTQAQRLGSLNKFKSGTANILIATDVAARGLDIPSVDVVINYDIPTDSKAYVHRVGRT 313
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTE---AKRISQ 365
ARAGR+G +ISLV QY+LE YL+IE+ I KKLP+ P+ + +L L + A+ I Q
Sbjct: 314 ARAGRSGKSISLVTQYDLEMYLRIEQSIQKKLPKDPSPPKAMLDALHVHVDRAYAEAIRQ 373
Query: 366 MTIKDSGNKRRRKGGDEDD 384
+R R+G D+ D
Sbjct: 374 TKEFHEKTRRGRRGKDDKD 392
>gi|444518869|gb|ELV12436.1| putative ATP-dependent RNA helicase DDX47 [Tupaia chinensis]
Length = 428
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/400 (55%), Positives = 277/400 (69%), Gaps = 41/400 (10%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ A TPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSA------------------------TPGRLIDHLENTKGFNLRALKYLVMD 150
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 151 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 210
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 211 VEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 270
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SK G
Sbjct: 271 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSK---FGSGEQ 327
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
T +Y++E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +
Sbjct: 328 LYYQPTKACQFSFLRYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMEL 387
Query: 369 KDSGNKRRR---KGGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 388 REHGEKKKRTREDAGDNDDTEG-AIGVRNKVAGGKMKKRK 426
>gi|307200753|gb|EFN80820.1| Probable ATP-dependent RNA helicase DDX47 [Harpegnathos saltator]
Length = 334
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/334 (59%), Positives = 256/334 (76%), Gaps = 11/334 (3%)
Query: 79 VLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDF 138
VLVGG+DM Q L L K+PHI++ATPGRL+DHL NTKGFSL LK+LV+ EADR+LN DF
Sbjct: 1 VLVGGMDMSAQALLLSKKPHIIIATPGRLVDHLENTKGFSLRNLKFLVMGEADRILNMDF 60
Query: 139 EKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRF 198
E +D+IL VIPR R+T LFSATMTKKV+KLQRA L+NPVK+E ++KY TV+ L+Q Y F
Sbjct: 61 EIEVDKILRVIPRERRTLLFSATMTKKVQKLQRASLRNPVKVEVSTKYQTVEKLQQYYIF 120
Query: 199 VPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLG 258
+P K+KD YLV+IL E++ +S M+F TC+ T AL+LRNLG A+P+ G MSQ+KR+
Sbjct: 121 IPVKFKDVYLVHILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPLHGQMSQNKRIA 180
Query: 259 ALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAI 318
AL KFKA +ILI TDVASR LDIP VD+VIN+DIPT+SKDYIHRVGRTARAGR+G +I
Sbjct: 181 ALTKFKARNRSILISTDVASRSLDIPHVDIVINFDIPTHSKDYIHRVGRTARAGRSGRSI 240
Query: 319 SLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGN----- 373
+ V QY++E Y +IE+LI K+LP +P EE EV+LL ERVTEA+RI +M +KD
Sbjct: 241 TFVTQYDVELYQRIEQLISKQLPLWPTEEGEVMLLQERVTEAQRIVKMEVKDIEENKKLG 300
Query: 374 KRRRKGGDEDDDIGRQFGI------NKKKLSKRK 401
KR+++ GD +DD + G+ N KK+ KR+
Sbjct: 301 KRKKRAGDNEDDTEQSIGVRKRIKGNGKKMGKRR 334
>gi|148678591|gb|EDL10538.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform CRA_a [Mus
musculus]
Length = 354
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/291 (67%), Positives = 239/291 (82%), Gaps = 6/291 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 64 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 117
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+D M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 118 LGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMD 177
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 178 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 237
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 238 VEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 297
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSK 299
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SK
Sbjct: 298 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSK 348
>gi|115400041|ref|XP_001215609.1| ATP-dependent rRNA helicase RRP3 [Aspergillus terreus NIH2624]
gi|114191275|gb|EAU32975.1| ATP-dependent rRNA helicase RRP3 [Aspergillus terreus NIH2624]
Length = 360
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/367 (53%), Positives = 271/367 (73%), Gaps = 16/367 (4%)
Query: 30 ILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQ 89
+LQAL++ + F + +L+PTRELA QI+ EALG+ IS+RC +L+GG+DM+ Q
Sbjct: 1 MLQALMDKPQQ------FHSLILAPTRELAQQIAHTVEALGARISVRCTLLIGGMDMISQ 54
Query: 90 TLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVI 149
+ALGK+PH++VATPGRL+DHL NTKGFSL TLKYLVLDEADRLL+ DF LD++L ++
Sbjct: 55 AIALGKKPHVIVATPGRLLDHLENTKGFSLRTLKYLVLDEADRLLDLDFGPILDKLLRLL 114
Query: 150 PRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLV 209
P+ R+TYLFSATM+ KV+ LQRA L +PV++ ++K T L Q Y F+P K+KD YLV
Sbjct: 115 PK-RKTYLFSATMSSKVESLQRASLSDPVRVSVSTKNQTASKLLQSYLFIPHKFKDFYLV 173
Query: 210 YILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECN 269
Y+L E + ++FTRT T+ L++MLRNLG AIPI G +SQS RL +LNKF+A N
Sbjct: 174 YLLNERAGQMGIIFTRTVHETQRLSIMLRNLGFPAIPIHGQLSQSARLASLNKFRARSRN 233
Query: 270 ILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWY 329
+LI TDVA+RGLDIP+VD V+NYD+P +SK YIHRVGRTARAG++G+A S V QYE+E +
Sbjct: 234 LLIATDVAARGLDIPAVDYVLNYDLPQDSKTYIHRVGRTARAGKSGIAFSFVTQYEVELW 293
Query: 330 LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNK---------RRRKGG 380
L+IE +GKK+ E+ E++EV++ ERV +A+R++ +T++D +K R+R
Sbjct: 294 LRIEDALGKKVEEYKPEKDEVMIFAERVNDAQRVAALTMRDMQDKDNKGRGPRNRKRTRD 353
Query: 381 DEDDDIG 387
D D D G
Sbjct: 354 DLDQDDG 360
>gi|429327957|gb|AFZ79717.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
equi]
Length = 457
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/372 (54%), Positives = 267/372 (71%), Gaps = 7/372 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKT AF +PILQ+LL+ + QR +A VL+PTREL +QI+EQF+A
Sbjct: 77 GKDVIGLAETGSGKTAAFTIPILQSLLD--KPQR----LYALVLAPTRELCVQITEQFKA 130
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I+L +++GG+DM+ Q L L KRPHI+V +PGRL DHL NTKGFS+ T+K+LVLD
Sbjct: 131 LGSSIALDVCMILGGLDMVSQALQLSKRPHIIVGSPGRLADHLENTKGFSIETMKFLVLD 190
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF+ +LD+ILN +P+ R+T+LFSATMT KV KLQ+ L PVKI +KYST
Sbjct: 191 EADRLLSMDFDDALDKILNALPKERRTFLFSATMTSKVAKLQKVSLIKPVKIHVNTKYST 250
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
L Q+Y +P K+K YL +L + M+F TC + L LRNL +I +
Sbjct: 251 SQLLVQKYLLIPLKFKWTYLAALLMHFGGYTAMIFCNTCLGAQKCCLYLRNLQITSICLH 310
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQ +RLGALN FK+G ++ TDV SRGLDIPSVD+VIN+DIP +SKDYIHRVGRT
Sbjct: 311 GKLSQMQRLGALNGFKSGSYRTMVVTDVGSRGLDIPSVDLVINFDIPQSSKDYIHRVGRT 370
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEF-PAEEEEVLLLLERVTEAKRISQMT 367
ARAGRTG AI++V QY++E + +IE +GKKL EF E+ L E ++A R ++
Sbjct: 371 ARAGRTGTAITVVTQYDIEPFQRIEFALGKKLEEFVDITEDAALSKHEDYSQALRTAESE 430
Query: 368 IKDSGNKRRRKG 379
KD+ N +RKG
Sbjct: 431 SKDTANIFKRKG 442
>gi|323455700|gb|EGB11568.1| hypothetical protein AURANDRAFT_2416, partial [Aureococcus
anophagefferens]
Length = 435
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/371 (54%), Positives = 263/371 (70%), Gaps = 7/371 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+G+D+IGLA+TGSGKTGAF LPIL LLE F L+PTRELA+QI E F+
Sbjct: 32 SGRDVIGLAETGSGKTGAFGLPILHKLLEKPSR------LFGVALAPTRELAVQIHEVFD 85
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
ALG+ I LRC +VGGV++ Q LAL K PH+VVATPGRL+DHL NTKGFSL T K LV+
Sbjct: 86 ALGAAIGLRCVCVVGGVEIAAQALALAKLPHVVVATPGRLVDHLENTKGFSLRTCKCLVM 145
Query: 128 DEADRLLNDDFEKSLDEILNVIPRM-RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
DEADR+L+ DFEK LD I+ IPR R + LFSATMT KV KLQRA L PVK+ K+
Sbjct: 146 DEADRMLSMDFEKELDAIVGAIPREGRCSMLFSATMTSKVAKLQRASLYKPVKVAVNDKF 205
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
+ L Q+Y FVPAK+K+CYL +L ++ +VF TC L+LRNLG A
Sbjct: 206 AMPRQLDQRYLFVPAKHKECYLAAVLDARRGATALVFCATCAGATRATLLLRNLGFDAAC 265
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
+ G M+Q KRLGAL+KFKAG IL+ TDVA+RGLDIP+VD+V+NYD+PT+ K+Y+HRVG
Sbjct: 266 LHGQMAQPKRLGALHKFKAGAATILVATDVAARGLDIPAVDLVLNYDVPTHGKEYVHRVG 325
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQM 366
RTARAGR G AI+ V QY++E Y ++E LIG KLP+ +E+ L L+RV +A R++
Sbjct: 326 RTARAGRKGSAIAFVTQYDVELYQRLEHLIGVKLPKADVDEDMALAFLDRVNDAARLAAG 385
Query: 367 TIKDSGNKRRR 377
++++ R++
Sbjct: 386 AMRETEEVRKQ 396
>gi|407927370|gb|EKG20264.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 363
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/335 (57%), Positives = 258/335 (77%), Gaps = 2/335 (0%)
Query: 47 FFACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGR 106
F +++PTRELA QIS+QFEALGS I ++CAVLVGG+DM Q +ALGK PHI+VATPGR
Sbjct: 7 LFGLIMAPTRELAYQISQQFEALGSLIGVKCAVLVGGMDMTPQQIALGKNPHIIVATPGR 66
Query: 107 LMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRM-RQTYLFSATMTKK 165
L+DHL NTKGFSL LKYLV+DEADRLL+ DF +D+IL V+P+ R+TYLFSATM+ K
Sbjct: 67 LLDHLENTKGFSLKQLKYLVMDEADRLLDLDFGPIIDKILKVLPKEGRRTYLFSATMSSK 126
Query: 166 VKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFT 224
V+ LQRA L NP+++ ++S + TV TL Q + FVP K+KD YL+++L ++ T++FT
Sbjct: 127 VESLQRASLSNPLRVSISSSSHQTVSTLIQHFLFVPHKHKDLYLIHLLNDMIGHPTIIFT 186
Query: 225 RTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIP 284
RT + T+ +A++LR LG AIP+ G +SQS RLGAL KFKA +IL+ TDVA+RGLDIP
Sbjct: 187 RTVNETQRIAILLRALGFGAIPLHGQLSQSARLGALGKFKAKTRDILVATDVAARGLDIP 246
Query: 285 SVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFP 344
SV VINYD+P +SK Y+HRVGRTARAG++G A+S+V QY++E +L+IE +GKK+ E P
Sbjct: 247 SVSYVINYDLPPDSKTYVHRVGRTARAGKSGKAVSIVTQYDVEIWLRIETALGKKVDEEP 306
Query: 345 AEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKG 379
+EEV++L ERV EA+R + +KD R +KG
Sbjct: 307 VVKEEVMVLAERVGEAQRAAIREMKDLHENRGKKG 341
>gi|209877961|ref|XP_002140422.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
gi|209556028|gb|EEA06073.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
Length = 442
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/373 (53%), Positives = 275/373 (73%), Gaps = 7/373 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLA+TGSGKTGAF LPILQ+LLE NQ + ++ VL+PTREL +QISEQF A
Sbjct: 66 GGDIIGLAETGSGKTGAFILPILQSLLE---NQSRM---YSVVLAPTRELCVQISEQFSA 119
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS ISL+ A +VGG+DM+ Q L+L K+PHI+VA+PGRL+DHL NTKGF++ ++KYLV+D
Sbjct: 120 LGSLISLQVANIVGGMDMVNQALSLAKKPHIIVASPGRLVDHLENTKGFNISSVKYLVMD 179
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DFE +L +I+ P+ R TYLFSATMT KV KLQR LKNPVKI +KY T
Sbjct: 180 EADRLLSMDFEIALTKIIEACPKNRNTYLFSATMTTKVAKLQRVSLKNPVKICVNTKYDT 239
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
+ L Q Y F+P K+K YLV ++ +S + ++FT TC + + AL+++ LG ++ +
Sbjct: 240 AENLLQYYMFIPFKFKWSYLVILVQNLSQYTGIIFTNTCISCKRGALLMQQLGFSSVCLH 299
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M+Q++RL ALN+FK+ + ++L T+V SRGLDIP VD VIN+DIP +SKDY+HRVGRT
Sbjct: 300 GRMNQTQRLAALNQFKSKQRHLLFTTEVGSRGLDIPHVDFVINFDIPMSSKDYVHRVGRT 359
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFP-AEEEEVLLLLERVTEAKRISQMT 367
ARAGR+G AISLV QY++E + ++E + KKL E+ +++++ + +V EA RI+ +
Sbjct: 360 ARAGRSGKAISLVTQYDVEMFQRVEFALNKKLDEYSDINKDQMMAIHGKVLEALRITDIE 419
Query: 368 IKDSGNKRRRKGG 380
+ +S K G
Sbjct: 420 LSESNEKSNLVGS 432
>gi|198413643|ref|XP_002129533.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
isoform 2 [Ciona intestinalis]
Length = 401
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/389 (53%), Positives = 261/389 (67%), Gaps = 55/389 (14%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLA+TGSGKTGAF +P+LQALLE QR FA VL+PTRELA QI EQF+A
Sbjct: 57 GNDVIGLAETGSGKTGAFCIPVLQALLE--NPQR----LFALVLTPTRELAFQIEEQFKA 110
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ V+VGGVDMM Q + L K+PH+VVATPGRL+DHL TKGF+L ++K+LVLD
Sbjct: 111 LGSAIGIKTCVVVGGVDMMGQQIILAKKPHVVVATPGRLVDHLEKTKGFTLRSIKFLVLD 170
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE LD IL VIPR R+T+LFSATMT KVKKLQRA L PVK +KY T
Sbjct: 171 EADRILNMDFESELDTILKVIPRERRTFLFSATMTGKVKKLQRAALTKPVKCAVNNKYHT 230
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD L Q Y F+P+K KD
Sbjct: 231 VDKLFQYYLFLPSKDKD------------------------------------------- 247
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
SKRLGALNKFK+ +IL+ TDVASRGLDIP VD+VIN D+P SKDYIHRVGRT
Sbjct: 248 -----SKRLGALNKFKSATKSILVATDVASRGLDIPHVDVVINMDVPARSKDYIHRVGRT 302
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR G +++ V QY++E Y +IE+LIGKKLPE+ E EV +L ERV EA+R++++ +
Sbjct: 303 ARAGRFGKSVTFVTQYDVELYQRIEELIGKKLPEYEMEHNEVKVLQERVAEAQRLARLEM 362
Query: 369 KDSGNKRRRKGGDEDDDIGRQFGINKKKL 397
K+ G+K+R + +++ Q I K K+
Sbjct: 363 KERGSKKRGAVASDSEELADQ-NIGKHKI 390
>gi|170093371|ref|XP_001877907.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647766|gb|EDR12010.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 441
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/377 (52%), Positives = 274/377 (72%), Gaps = 13/377 (3%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D+IG+A TGSGKT AF +PIL L + + +FACVLSPTRELA QIS QFE
Sbjct: 40 AGRDIIGIAPTGSGKTLAFVIPILHRLWDNPQ------GYFACVLSPTRELAYQISAQFE 93
Query: 68 ALGSGISLRCAVLVGGVD-MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLV 126
ALG+ + ++ V+VGG D +QQ + L ++PHI+VATPGRL DHL +TKGFSL +LK+LV
Sbjct: 94 ALGAAMGVQSVVIVGGDDDRVQQAVRLAQKPHIIVATPGRLHDHLKSTKGFSLRSLKHLV 153
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAA-SK 185
LDEADRLL+ DF++ + EI+ IP+ R TYLFSATMT V KLQRA L +PV+++A+ +
Sbjct: 154 LDEADRLLDLDFQREITEIMQSIPKERCTYLFSATMTANVSKLQRASLSDPVRVDASLFR 213
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
Y+TV TL Q Y P K+ LVY++ + + +VF RT + L+++LR+LG A+
Sbjct: 214 YTTVSTLVQHYLLCPLVEKEVTLVYLINSLVQNLIIVFVRTVADAKRLSIILRSLGFDAV 273
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
P+ G ++QS+RLGA +FK+G+ IL+ TDVASRGLD+P+VD+VINYD PT+SKDYIHRV
Sbjct: 274 PLHGELTQSQRLGAFTRFKSGKSKILVATDVASRGLDVPNVDVVINYDTPTHSKDYIHRV 333
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
GRTARAGR G +I +V QY+ E L++EK++ +KL +P + +E+ LL ERV EA R+++
Sbjct: 334 GRTARAGRAGKSILMVTQYDAELMLRLEKVLNQKLDLYPTDLQEIALLKERVVEAGRLAR 393
Query: 366 MTIKDS-----GNKRRR 377
+ + G K+RR
Sbjct: 394 NQLNEESKARGGGKKRR 410
>gi|157115632|ref|XP_001658272.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108876828|gb|EAT41053.1| AAEL007274-PA [Aedes aegypti]
Length = 442
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/371 (54%), Positives = 258/371 (69%), Gaps = 59/371 (15%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPILQALLE QR +FA +L+PTRELA QISEQFEA
Sbjct: 94 GKDVIGLAETGSGKTGAFALPILQALLE--NPQR----YFAVILTPTRELAYQISEQFEA 147
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ I ++C V+VGG+DM+ Q L L ++PHI++ATPGRL+DHL NTKGF+L +KYLV+D
Sbjct: 148 LGASIGIKCCVIVGGMDMVSQALHLARKPHIIIATPGRLVDHLENTKGFNLKAVKYLVMD 207
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE L++IL VIPR R+T+LFSATMTKKVKKL+RA LK+PVK+E +SKY T
Sbjct: 208 EADRILNLDFEVELEKILKVIPRERRTFLFSATMTKKVKKLERASLKDPVKVEVSSKYQT 267
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L Q Y F+PAKYKD YLV+IL E++ +S M+F TC+ T AL++
Sbjct: 268 VEKLLQYYIFIPAKYKDVYLVHILNELAGNSFMIFCSTCNNTVRTALIV----------- 316
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
N+DIPT+SKDYIHRVGRT
Sbjct: 317 ------------------------------------------NFDIPTHSKDYIHRVGRT 334
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR G A++ V QY++E Y +IE L+GKKLP+F EE+EV+ L ERV EA+R +++ +
Sbjct: 335 ARAGRAGKAVTFVTQYDVELYQRIEHLLGKKLPQFKCEEDEVMALQERVGEAQRTARLEL 394
Query: 369 KDSGNKRRRKG 379
KD +++ KG
Sbjct: 395 KDIDDRKGSKG 405
>gi|403214400|emb|CCK68901.1| hypothetical protein KNAG_0B04660 [Kazachstania naganishii CBS
8797]
Length = 494
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/376 (55%), Positives = 271/376 (72%), Gaps = 13/376 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKT AFA+PIL +L + ++AC+LSPTRELA QI E F++
Sbjct: 111 GKDIIGLAQTGSGKTAAFAIPILNSLWHDQQ------PYYACILSPTRELAQQIKETFDS 164
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R +VGG++MM Q L ++PHI++ TPGRLMDHL NT+GFSL LKYLV+D
Sbjct: 165 LGSLMGVRSVCIVGGMNMMDQARDLMRKPHIIIGTPGRLMDHLENTRGFSLRNLKYLVMD 224
Query: 129 EADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL +IP + R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 225 EADRLLDMEFGPVLDRILKIIPTQGRTTYLFSATMTSKIDKLQRASLTNPVKCAVSTKYQ 284
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRT-CDATRLLALMLRNLGQ-RAI 245
TVDTL Q VP KD YLVY+L E S ++FTRT +A R+ L NL Q A
Sbjct: 285 TVDTLVQTLMVVPGGVKDTYLVYLLNEFIGKSMIIFTRTKANAERISGLA--NLLQFSAT 342
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G ++Q++R GAL+ FKAG +IL+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRV
Sbjct: 343 ALHGDLNQNQRTGALDLFKAGRRSILVATDVAARGLDIPSVDVVINYDIPVDSKSYIHRV 402
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA--KRI 363
GRTARAGR+G +ISLV+QY+LE L+IE+++GKKLP+ +++ VL L + V +A + +
Sbjct: 403 GRTARAGRSGKSISLVSQYDLELILRIEEVLGKKLPKENVDKDIVLALRDSVDKANGEVV 462
Query: 364 SQMTIKDSGNKRRRKG 379
+M+ ++ + R KG
Sbjct: 463 KEMSRRNKEKQARGKG 478
>gi|452821215|gb|EME28248.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 404
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/347 (58%), Positives = 270/347 (77%), Gaps = 6/347 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+A+TGSGKT AF +PILQ+LL+ N+ +FA V+SPTRELA QI E FE
Sbjct: 43 GRDIIGIAETGSGKTAAFVIPILQSLLD--HNK----PYFALVISPTRELAFQIKEHFEL 96
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG I+LR V+VGGVD++ Q A ++PH++VATPGRL+DHL NTKGFSL ++++LVLD
Sbjct: 97 LGRSIALRVVVIVGGVDIVSQAAAFARKPHVIVATPGRLVDHLENTKGFSLQSIRFLVLD 156
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DFEK L++I+ +P+ RQ++LFSATMT+KV+KLQR L NPVK++ + KY+T
Sbjct: 157 EADRLLSMDFEKELEKIIAALPKERQSFLFSATMTRKVQKLQRVSLTNPVKLQVSEKYAT 216
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+TL Q Y F+PAKYKDC+LV++ E S T++F T ++T L+L+L+NLG A I
Sbjct: 217 VETLIQNYLFIPAKYKDCFLVFLCQEWSGHPTIIFVDTQNSTLRLSLLLKNLGFGATAIH 276
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M Q+KRL AL+KFK G+ +LI TD+ASRGLDIPSVD+++NYDIP + K YIHRVGRT
Sbjct: 277 GGMLQTKRLEALSKFKQGKKTVLIATDLASRGLDIPSVDLIVNYDIPLHVKAYIHRVGRT 336
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLE 355
+RAGRTG AI+LV QY++E Y ++E+ I KKL +P +E+ V LLE
Sbjct: 337 SRAGRTGRAINLVTQYDIEAYQKVEQYIQKKLDAYPCDEDRVFHLLE 383
>gi|444318027|ref|XP_004179671.1| hypothetical protein TBLA_0C03500 [Tetrapisispora blattae CBS 6284]
gi|387512712|emb|CCH60152.1| hypothetical protein TBLA_0C03500 [Tetrapisispora blattae CBS 6284]
Length = 506
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/374 (53%), Positives = 267/374 (71%), Gaps = 9/374 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKT AFA+PIL L E + ++AC+++PTRELA QI EQF++
Sbjct: 123 GKDIIGLAQTGSGKTAAFAIPILNKLWEDQQ------PYYACIMAPTRELAQQIKEQFDS 176
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ + +R +VGG++MM Q L ++PHI++ATPGRLMDHL NT+GFSL LK+LV+D
Sbjct: 177 LGALMGVRSVCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTRGFSLRKLKFLVMD 236
Query: 129 EADRLLNDDFEKSLDEILNVIPRM-RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL ++P R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 237 EADRLLDLEFGPVLDRILKILPTQGRTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQ 296
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL Q VP K+ YL+Y++ E S ++FTRT L+L+ L AI +
Sbjct: 297 TVDTLIQTLMVVPGGLKNTYLIYLINEFVGKSIIIFTRTKANAERLSLLSNTLEFDAIAL 356
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++Q++R GAL+ FKAG+ +ILI TDVA+RGLDIPSVD+VINYDIP +SK YIHRVGR
Sbjct: 357 HGDLNQNQRTGALDLFKAGKKSILIATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGR 416
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERV--TEAKRISQ 365
TARAGR+G +ISLV+QY+LE L+IE ++GKKLP+ + + +L L + V T + I +
Sbjct: 417 TARAGRSGKSISLVSQYDLELILRIEDVLGKKLPKENVDRDIILSLRDSVEKTNGEVIME 476
Query: 366 MTIKDSGNKRRRKG 379
+ ++ + R KG
Sbjct: 477 LNRRNKEKQLRGKG 490
>gi|440299556|gb|ELP92108.1| ATP-dependent rRNA helicase rrp3, putative [Entamoeba invadens IP1]
Length = 433
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/378 (51%), Positives = 266/378 (70%), Gaps = 7/378 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
KD+IG+AQTGSGKT AF LP+L LL E +R FF V+ PTRELA Q+ E + +
Sbjct: 51 KDIIGIAQTGSGKTAAFLLPMLNHLLNTNERKRD---FFCIVVEPTRELAAQVIEVLDRM 107
Query: 70 GSGIS-LRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLV 126
+ L +LVGG+D M+Q + L K+P+++V TPGRL+ H+ NTKG S L ++LV
Sbjct: 108 AEALPGLVSCLLVGGMDEMKQAVLLAKKPNVIVCTPGRLVYHINNTKGVSQSLQKTRFLV 167
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKI-EAASK 185
+DEAD+LL+ DF +D+++ +P+ R T LFSATM+ +V+KLQRA L +PVKI ++ K
Sbjct: 168 IDEADKLLDMDFAADIDKLIESVPKQRTTMLFSATMSSRVEKLQRASLVHPVKIKQSEQK 227
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
YSTVDTL+Q+Y F+P KY+D YL+ IL +V A S ++FT C L LMLR LG AI
Sbjct: 228 YSTVDTLRQEYLFIPFKYRDGYLMAILQKVGAQSAIIFTMKCSGNTRLVLMLRQLGYEAI 287
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
P++G MSQ KRL AL KFK+G+ ++L+ TDVASRGLDIP VD VINYD P KDYIHRV
Sbjct: 288 PLNGKMSQQKRLLALEKFKSGKRSLLVATDVASRGLDIPDVDFVINYDCPVEPKDYIHRV 347
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
GRTARAG++G+AI++V QY LE+Y +IE +I KKL E+ EE+ + + R +EA R+
Sbjct: 348 GRTARAGKSGMAITIVTQYSLEFYQRIETMIEKKLDEYKVEEQVAMSYVNRCSEAMRVVN 407
Query: 366 MTIKDSGNKRRRKGGDED 383
+KD +K + + D++
Sbjct: 408 QILKDEASKEKERIKDKN 425
>gi|66357446|ref|XP_625901.1| Rrp3p, eIF4A-1-family RNA SFII helicase (DEXDc+HELICc)
[Cryptosporidium parvum Iowa II]
gi|46226956|gb|EAK87922.1| Rrp3p, eIF4A-1-family RNA SFII helicase (DEXDc+HELICc)
[Cryptosporidium parvum Iowa II]
Length = 446
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/367 (53%), Positives = 262/367 (71%), Gaps = 7/367 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTG+F +PILQ LL+ VP +A +L+PTREL +QISEQF A
Sbjct: 70 GRDIIGLAETGSGKTGSFIIPILQRLLD-----DQVP-MYAVILAPTRELCVQISEQFSA 123
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
GS ISL+ A LVGG+DM+ Q+L+L K+PHI+VA+PGRL+DHL NTKGF++G +K+LV+D
Sbjct: 124 FGSLISLKIATLVGGLDMVMQSLSLAKKPHIIVASPGRLVDHLENTKGFNIGGIKFLVMD 183
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DFE +L++I+ PR R TYLFSATMT KV KLQ+ L NP+KI +KY T
Sbjct: 184 EADRLLSMDFEIALNKIVESSPRNRTTYLFSATMTTKVAKLQKISLSNPIKICVNTKYDT 243
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
L Q Y F+P KYK Y + +L + + ++F TC R L+ + LG +I +
Sbjct: 244 AANLMQYYMFIPFKYKWSYFIGMLQNLGQYTGIIFCNTCINCRRGDLLAKELGFNSISLH 303
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQS+RL ALN FK + +L T+V SRGLDIP VD VIN+DIPT+SKDY+HRVGRT
Sbjct: 304 GRMSQSQRLSALNLFKGKQKRLLFTTEVGSRGLDIPHVDFVINFDIPTSSKDYVHRVGRT 363
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA-EEEEVLLLLERVTEAKRISQMT 367
ARAGR+G AIS+V QY++E + +IE + +KL E+ + + EEV+ + +V ++ R
Sbjct: 364 ARAGRSGRAISMVTQYDVETFQRIEFALNRKLDEYTSLQREEVMAIHAKVVDSLRTVDAE 423
Query: 368 IKDSGNK 374
+ DS K
Sbjct: 424 LNDSNEK 430
>gi|323508819|dbj|BAJ77303.1| cgd4_3180 [Cryptosporidium parvum]
gi|323510507|dbj|BAJ78147.1| cgd4_3180 [Cryptosporidium parvum]
Length = 441
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/367 (53%), Positives = 262/367 (71%), Gaps = 7/367 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTG+F +PILQ LL+ VP +A +L+PTREL +QISEQF A
Sbjct: 65 GRDIIGLAETGSGKTGSFIIPILQRLLD-----DQVP-MYAVILAPTRELCVQISEQFSA 118
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
GS ISL+ A LVGG+DM+ Q+L+L K+PHI+VA+PGRL+DHL NTKGF++G +K+LV+D
Sbjct: 119 FGSLISLKIATLVGGLDMVMQSLSLAKKPHIIVASPGRLVDHLENTKGFNIGGIKFLVMD 178
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DFE +L++I+ PR R TYLFSATMT KV KLQ+ L NP+KI +KY T
Sbjct: 179 EADRLLSMDFEIALNKIVESSPRNRTTYLFSATMTTKVAKLQKISLSNPIKICVNTKYDT 238
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
L Q Y F+P KYK Y + +L + + ++F TC R L+ + LG +I +
Sbjct: 239 AANLMQYYMFIPFKYKWSYFIGMLQNLGQYTGIIFCNTCINCRRGDLLAKELGFNSISLH 298
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQS+RL ALN FK + +L T+V SRGLDIP VD VIN+DIPT+SKDY+HRVGRT
Sbjct: 299 GRMSQSQRLSALNLFKGKQKRLLFTTEVGSRGLDIPHVDFVINFDIPTSSKDYVHRVGRT 358
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA-EEEEVLLLLERVTEAKRISQMT 367
ARAGR+G AIS+V QY++E + +IE + +KL E+ + + EEV+ + +V ++ R
Sbjct: 359 ARAGRSGRAISMVTQYDVETFQRIEFALNRKLDEYTSLQREEVMAIHAKVVDSLRTVDAE 418
Query: 368 IKDSGNK 374
+ DS K
Sbjct: 419 LNDSNEK 425
>gi|366994708|ref|XP_003677118.1| hypothetical protein NCAS_0F02790 [Naumovozyma castellii CBS 4309]
gi|342302986|emb|CCC70763.1| hypothetical protein NCAS_0F02790 [Naumovozyma castellii CBS 4309]
Length = 502
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/374 (53%), Positives = 266/374 (71%), Gaps = 9/374 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLAQTGSGKT AFA+PIL +L + ++AC+L+PTRELA QI E F++
Sbjct: 119 GNDIIGLAQTGSGKTAAFAIPILNSLWHDQQ------PYYACILAPTRELAQQIKETFDS 172
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R +VGG++MM Q L ++PHI++ATPGRLMDHL NTKGFSL LKYLV+D
Sbjct: 173 LGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKYLVMD 232
Query: 129 EADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL ++P + R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 233 EADRLLDMEFGPVLDRILKILPTQGRTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQ 292
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL Q VP KD YLVY+L E +T++FTRT ++ + L A +
Sbjct: 293 TVDTLVQTLIVVPGGLKDTYLVYLLNEFIGKTTIIFTRTKANAERISGLCNLLEFNATAL 352
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++Q++R GAL+ FKAG +IL+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRVGR
Sbjct: 353 HGDLNQNQRTGALDLFKAGRKSILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGR 412
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA--KRISQ 365
TARAGR+G +ISLV+QY+LE L+IE+++GKKLP+ ++E +L + V +A + I +
Sbjct: 413 TARAGRSGKSISLVSQYDLELILRIEEVLGKKLPKESVDKEMILHFRDSVDKANGEVIME 472
Query: 366 MTIKDSGNKRRRKG 379
M ++ + R KG
Sbjct: 473 MNRRNKEKQLRGKG 486
>gi|336270890|ref|XP_003350204.1| hypothetical protein SMAC_01096 [Sordaria macrospora k-hell]
gi|380095599|emb|CCC07072.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 507
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/373 (52%), Positives = 266/373 (71%), Gaps = 24/373 (6%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
+D+IG+A+TGSGKT AFALPILQALL+ + FA VL+PTRELA QI++ FEA
Sbjct: 134 NRDIIGIAETGSGKTAAFALPILQALLDKPQ------PLFALVLAPTRELAAQIAQAFEA 187
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS ISLRCA+++GG+DM+ Q +ALGK+PH++VATPGRL+DHL TKGFSL +++YLV+D
Sbjct: 188 LGSLISLRCALILGGMDMVTQAIALGKKPHVIVATPGRLLDHLEKTKGFSLRSMQYLVMD 247
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF L++IL +PR R+T+LFSATM+ KV+ LQRA L++P+K+ ++ KY+
Sbjct: 248 EADRLLDMDFGPILEKILKFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSVSTNKYA 307
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TLK Y F+P +KD YLVY+ + S C A + R+
Sbjct: 308 TVSTLKSNYVFIPHMHKDTYLVYLCNDALPS--------CSAPSAWEPSPSTVVSRS--- 356
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
RLGALNKF+AG IL+ TDVA+RGLDIP+VD VIN+D+P +SK Y+HRVGR
Sbjct: 357 ------PSRLGALNKFRAGSREILVATDVAARGLDIPNVDCVINHDLPQDSKTYVHRVGR 410
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G AIS+V QY+LE +L+IE +G KL E+P E++EV++ RV EA+R ++
Sbjct: 411 TARAGKSGHAISIVTQYDLEIWLRIEAALGHKLDEYPLEKDEVMVFKPRVEEAQRHARNE 470
Query: 368 IKDSGNKRRRKGG 380
+K + + GG
Sbjct: 471 MKSLMENQGKHGG 483
>gi|50291507|ref|XP_448186.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661162|sp|Q6FNK8.1|RRP3_CANGA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|49527497|emb|CAG61137.1| unnamed protein product [Candida glabrata]
Length = 493
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/375 (53%), Positives = 267/375 (71%), Gaps = 9/375 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG D+IGLAQTGSGKT AFA+PIL L E + ++ACVL+PTRELA QI E F+
Sbjct: 109 AGSDVIGLAQTGSGKTAAFAIPILNKLWEDQQ------PYYACVLAPTRELAQQIKETFD 162
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
+LGS + +R +VGG++MM Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+
Sbjct: 163 SLGSLMGVRTTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLKNLKFLVM 222
Query: 128 DEADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
DEADRLL+ +F LD IL +IP + R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 223 DEADRLLDMEFGPVLDRILKIIPTKGRTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKY 282
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
TVDTL Q VP K+ +L+Y+L E + ++FTRT L+ + L A
Sbjct: 283 QTVDTLVQTLMVVPGGLKNTFLIYLLNEFIGKTVIIFTRTKANAERLSGLCNLLEFSATA 342
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
+ G ++Q++R GAL+ FKAG+ +IL+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRVG
Sbjct: 343 LHGDLNQNQRTGALDLFKAGKRSILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVG 402
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA--KRIS 364
RTARAGR+G +ISLV+QY+LE L+IE+++GKKLP+ ++ +L L + V +A + +
Sbjct: 403 RTARAGRSGKSISLVSQYDLELILRIEEVLGKKLPKESVDKNIILTLRDSVDKANGEVVM 462
Query: 365 QMTIKDSGNKRRRKG 379
+M ++ + R KG
Sbjct: 463 EMNRRNKEKQARGKG 477
>gi|50305787|ref|XP_452854.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660562|sp|Q6CT85.1|RRP3_KLULA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|49641987|emb|CAH01705.1| KLLA0C14608p [Kluyveromyces lactis]
Length = 487
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/353 (55%), Positives = 255/353 (72%), Gaps = 7/353 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLAQTGSGKT AFA+PIL L + ++AC+L+PTRELA QI E F++
Sbjct: 104 GSDIIGLAQTGSGKTAAFAIPILNQLWHDQQ------PYYACILAPTRELAQQIKETFDS 157
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R +VGG+ MM Q L ++PHI++ATPGRLMDHL NTKGF+L LKYLV+D
Sbjct: 158 LGSLMGVRSTCIVGGMSMMDQARDLMRKPHIIIATPGRLMDHLENTKGFNLRKLKYLVMD 217
Query: 129 EADRLLNDDFEKSLDEILNVIPRM-RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD ILN+IP R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 218 EADRLLDMEFGPVLDRILNIIPTQGRTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQ 277
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL Q VP K+ +L+Y+L E ST+VFTRT ++ + L A +
Sbjct: 278 TVDTLVQTLMVVPGGLKNTFLIYLLNEFIGKSTIVFTRTKANAERISNLCNLLEFSATAL 337
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++Q++R GAL+ FKAG+ +IL+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRVGR
Sbjct: 338 HGDLNQNQRTGALDLFKAGKRSILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGR 397
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
TARAGR+G +ISLV+QY+LE L+IE ++GKKLP+ +++ +L L + V +A
Sbjct: 398 TARAGRSGKSISLVSQYDLELILRIEDVLGKKLPKENVDKDAILALRDSVDKA 450
>gi|67624705|ref|XP_668635.1| DEAD box protein [Cryptosporidium hominis TU502]
gi|54659844|gb|EAL38406.1| DEAD box protein [Cryptosporidium hominis]
Length = 441
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/367 (52%), Positives = 261/367 (71%), Gaps = 7/367 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTG+F +PILQ LL+ VP +A +L+PTREL +QISEQF A
Sbjct: 65 GRDIIGLAETGSGKTGSFIIPILQRLLD-----DQVP-MYAVILAPTRELCVQISEQFSA 118
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
GS ISL+ A LVGG+DM+ Q+L+L K+PHI+VA+PGRL+DHL NTKGF++G +K+LV+D
Sbjct: 119 FGSLISLKIATLVGGLDMVMQSLSLAKKPHIIVASPGRLVDHLENTKGFNIGGIKFLVMD 178
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DFE +L++I+ P+ R TYLFSATMT KV KLQ+ L NP+KI +KY T
Sbjct: 179 EADRLLSMDFEIALNKIVESSPKNRTTYLFSATMTTKVAKLQKISLSNPIKICVNTKYDT 238
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
L Q Y F+P KYK Y + +L + + ++F TC R L+ + LG +I +
Sbjct: 239 AANLMQYYMFIPFKYKWSYFIGLLQNLGQYTGIIFCNTCINCRRGDLLAKELGFNSISLH 298
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQS+RL ALN FK + +L T+V SRGLDIP VD VIN+DIPT+SKDY+HRVGRT
Sbjct: 299 GRMSQSQRLSALNLFKGKQKRLLFTTEVGSRGLDIPHVDFVINFDIPTSSKDYVHRVGRT 358
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA-EEEEVLLLLERVTEAKRISQMT 367
ARAGR+G AIS+V QY++E + +IE + KKL E+ + + EE + + +V ++ R
Sbjct: 359 ARAGRSGRAISMVTQYDVETFQRIEFALNKKLDEYTSLQREEAMAIHAKVVDSLRTVDAE 418
Query: 368 IKDSGNK 374
+ DS K
Sbjct: 419 LNDSNEK 425
>gi|401884069|gb|EJT48246.1| ATP-dependent RNA helicase [Trichosporon asahii var. asahii CBS
2479]
Length = 435
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/362 (53%), Positives = 258/362 (71%), Gaps = 30/362 (8%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+AQTGS A +L+ R + I++Q +A
Sbjct: 61 GRDIIGIAQTGS----------------------------AVLLAHPR--SDSIAKQVQA 90
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ I +R AV+VGG+DMM Q++AL KRPHI+VATPGRLMDHL NTKGFSL LKYLVLD
Sbjct: 91 LGAPIGVRTAVIVGGMDMMSQSIALSKRPHIIVATPGRLMDHLENTKGFSLKALKYLVLD 150
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +D++L VIP+ R T+LFSAT++ KV+KL+RA L P++++ SKYST
Sbjct: 151 EADRLLDLDFGPIIDKLLKVIPKERNTFLFSATLSTKVEKLKRASLNKPIQVKVDSKYST 210
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y F P KD YL Y++ E+S+SS ++FT T D + L++ML LG AIP+
Sbjct: 211 VSTLMQYYVFFPEVQKDAYLFYLVNELSSSSMIIFTSTVDRAQRLSIMLNRLGYPAIPLH 270
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQS RLG+LNKFK+G IL+ TDVASRGLDIPSVD+VIN+DIP+NSKDY+HRVGRT
Sbjct: 271 GQMSQSARLGSLNKFKSGGRKILVATDVASRGLDIPSVDLVINFDIPSNSKDYVHRVGRT 330
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+LV QY++ IE IG++LP F ++E V +L +RV EA R +++ +
Sbjct: 331 ARAGRSGKSITLVTQYDVVMLKGIEAAIGRQLPAFDCDKEAVAILSDRVNEAARAARIEM 390
Query: 369 KD 370
++
Sbjct: 391 RE 392
>gi|261194144|ref|XP_002623477.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces dermatitidis
SLH14081]
gi|239588491|gb|EEQ71134.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces dermatitidis
SLH14081]
Length = 465
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/371 (56%), Positives = 274/371 (73%), Gaps = 22/371 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQAL+E ++ F +L+PTRELA QIS FEA
Sbjct: 93 GRDLIGLAETGSGKTAAFALPILQALMEKPQS------LFGLILAPTRELAYQISGAFEA 146
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS IS+RCAV+VGG+DM+ Q +ALGK+PHIVVATPGRL+DHL NTKGFSL LKYLV+D
Sbjct: 147 LGSLISVRCAVIVGGMDMVPQAIALGKKPHIVVATPGRLLDHLENTKGFSLRNLKYLVMD 206
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF LD+IL V+PR R+TYLFSATM+ KV+ LQRA L + +++ +
Sbjct: 207 EADRLLDLDFGPILDKILKVLPRERRTYLFSATMSSKVESLQRASLSSGLRLPS------ 260
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
F+P K + L E + S +VFTRT + T+ LA++LR LG AIP+
Sbjct: 261 ---------FIPTNIKTLPRLS-LNEYAGQSAIVFTRTVNETQRLAILLRALGFGAIPLH 310
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS RLGAL+KF++ +IL+ TDVA+RGLDIPSVD+V+N+D+P +SK YIHRVGRT
Sbjct: 311 GQLSQSSRLGALSKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPPDSKTYIHRVGRT 370
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG++G A ++V QY+LE +L+IE +GKKL E+ E+EEV++L +RV EA+R + +
Sbjct: 371 ARAGKSGHAFNIVTQYDLEVWLRIENALGKKLEEYKVEKEEVMVLSDRVGEAQRHAITEM 430
Query: 369 KDSGNKRRRKG 379
KD KR +G
Sbjct: 431 KDLHEKRGSRG 441
>gi|365984991|ref|XP_003669328.1| hypothetical protein NDAI_0C04250 [Naumovozyma dairenensis CBS 421]
gi|343768096|emb|CCD24085.1| hypothetical protein NDAI_0C04250 [Naumovozyma dairenensis CBS 421]
Length = 504
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/353 (54%), Positives = 255/353 (72%), Gaps = 7/353 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLAQTGSGKT AFA+PIL +L + ++AC+L+PTRELA QI E F++
Sbjct: 121 GHDIIGLAQTGSGKTAAFAIPILNSLWHDQQ------PYYACILAPTRELAQQIKETFDS 174
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R +VGG++MM Q L ++PH+++ATPGRLMDHL NTKGFSL LKYLV+D
Sbjct: 175 LGSLMGVRSVCIVGGMNMMDQARDLMRKPHVIIATPGRLMDHLENTKGFSLRKLKYLVMD 234
Query: 129 EADRLLNDDFEKSLDEILNVIPRM-RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL ++P R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 235 EADRLLDMEFGPVLDRILKILPTQGRTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQ 294
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL Q VP K+ +L+Y+L E ST++FTRT ++ + L A +
Sbjct: 295 TVDTLVQTLIVVPGGLKNTFLIYLLNEYIGKSTIIFTRTKANAERISGLCNLLEFNATAL 354
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++Q++R GAL+ FKAG IL+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRVGR
Sbjct: 355 HGDLNQNQRTGALDLFKAGRKTILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGR 414
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
TARAGR+G +ISLV+QY+LE L+IE+++GKKLP+ ++E +L L + V +A
Sbjct: 415 TARAGRSGKSISLVSQYDLELILRIEEVLGKKLPKETVDKEMILTLRDSVDKA 467
>gi|349578615|dbj|GAA23780.1| K7_Rrp3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 501
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/353 (55%), Positives = 256/353 (72%), Gaps = 7/353 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLAQTGSGKT AFA+PIL L E ++AC+L+PTRELA QI E F++
Sbjct: 118 GHDIIGLAQTGSGKTAAFAIPILNRLWHDQE------PYYACILAPTRELAQQIKETFDS 171
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R +VGG++MM Q L ++PHIV+ATPGRLMDHL NTKGFSL LK+LV+D
Sbjct: 172 LGSLMGVRSTCIVGGMNMMDQARDLMRKPHIVIATPGRLMDHLENTKGFSLRKLKFLVMD 231
Query: 129 EADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL +IP + R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 232 EADRLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQ 291
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL Q VP K+ YL+Y+L E + ++FTRT L+ + L A +
Sbjct: 292 TVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATAL 351
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++Q++R+GAL+ FKAG+ +IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGR
Sbjct: 352 HGDLNQNQRMGALDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGR 411
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
TARAGR+G +ISLV+QY+LE L+IE+++GKKLP+ ++ +L L + V +A
Sbjct: 412 TARAGRSGKSISLVSQYDLELILRIEEVLGKKLPKESVDKNIILTLRDSVDKA 464
>gi|367001072|ref|XP_003685271.1| hypothetical protein TPHA_0D01990 [Tetrapisispora phaffii CBS 4417]
gi|357523569|emb|CCE62837.1| hypothetical protein TPHA_0D01990 [Tetrapisispora phaffii CBS 4417]
Length = 498
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/389 (52%), Positives = 273/389 (70%), Gaps = 13/389 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLAQTGSGKT AFA+PIL L E + ++AC+L+PTRELA QI E F++
Sbjct: 112 GHDIIGLAQTGSGKTAAFAIPILNKLWEDQQ------PYYACILAPTRELAQQIKETFDS 165
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R +VGG++MM Q+ L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+D
Sbjct: 166 LGSLMGVRSVCIVGGMNMMDQSRELMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMD 225
Query: 129 EADRLLNDDFEKSLDEILNVIPRM-RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL +IP R TYLFSATMT K++KLQRA L NPVK ++KY
Sbjct: 226 EADRLLDMEFGPVLDRILKIIPTQDRTTYLFSATMTSKIEKLQRASLTNPVKCAVSNKYQ 285
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRT-CDATRLLALMLRNLGQ-RAI 245
TV+TL Q VP K+ YL+Y+L E S +VFTRT +A RL AL NL + +
Sbjct: 286 TVETLVQTLMVVPGGLKNTYLIYLLNEFIGKSIIVFTRTKANAERLSAL--SNLLEFSST 343
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G ++Q++R GAL+ FKAG+ IL+ DVA+RGLDIPSVD+VINYDIP +SK YIHRV
Sbjct: 344 ALHGDLNQNQRTGALDLFKAGKRQILVAIDVAARGLDIPSVDIVINYDIPVDSKSYIHRV 403
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA--KRI 363
GRTARAGR+G +ISLV+QY+LE L+IE ++GKKLP+ ++ +++ + V +A + +
Sbjct: 404 GRTARAGRSGKSISLVSQYDLELILRIEDVLGKKLPKENVDKNTIMMFRDSVDKANGEVV 463
Query: 364 SQMTIKDSGNKRRRKGGDEDDDIGRQFGI 392
+M ++ + R KG + R+ I
Sbjct: 464 MEMNRRNKEKQARGKGTQKSRSRARETWI 492
>gi|323348235|gb|EGA82484.1| Rrp3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 543
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/353 (54%), Positives = 256/353 (72%), Gaps = 7/353 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLAQTGSGKT AFA+PIL L E ++AC+L+PTRELA QI E F++
Sbjct: 160 GHDIIGLAQTGSGKTAAFAIPILNRLWHDQE------PYYACILAPTRELAQQIKETFDS 213
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R +VGG++MM Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+D
Sbjct: 214 LGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMD 273
Query: 129 EADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL +IP + R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 274 EADRLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQ 333
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL Q VP K+ YL+Y+L E + ++FTRT L+ + L A +
Sbjct: 334 TVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATAL 393
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++Q++R+GAL+ FKAG+ +IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGR
Sbjct: 394 HGDLNQNQRMGALDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGR 453
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
TARAGR+G +ISLV+QY+LE L+IE+++GKKLP+ ++ +L L + V +A
Sbjct: 454 TARAGRSGKSISLVSQYDLELILRIEEVLGKKLPKESVDKNIILTLRDSVDKA 506
>gi|259146813|emb|CAY80069.1| Rrp3p [Saccharomyces cerevisiae EC1118]
gi|365765178|gb|EHN06690.1| Rrp3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 501
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/353 (54%), Positives = 256/353 (72%), Gaps = 7/353 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLAQTGSGKT AFA+PIL L E ++AC+L+PTRELA QI E F++
Sbjct: 118 GHDIIGLAQTGSGKTAAFAIPILNRLWHDQE------PYYACILAPTRELAQQIKETFDS 171
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R +VGG++MM Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+D
Sbjct: 172 LGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMD 231
Query: 129 EADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL +IP + R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 232 EADRLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQ 291
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL Q VP K+ YL+Y+L E + ++FTRT L+ + L A +
Sbjct: 292 TVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATAL 351
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++Q++R+GAL+ FKAG+ +IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGR
Sbjct: 352 HGDLNQNQRMGALDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGR 411
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
TARAGR+G +ISLV+QY+LE L+IE+++GKKLP+ ++ +L L + V +A
Sbjct: 412 TARAGRSGKSISLVSQYDLELILRIEEVLGKKLPKESVDKNIILTLRDSVDKA 464
>gi|323354635|gb|EGA86470.1| Rrp3p [Saccharomyces cerevisiae VL3]
Length = 501
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/353 (54%), Positives = 256/353 (72%), Gaps = 7/353 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLAQTGSGKT AFA+PIL L E ++AC+L+PTRELA QI E F++
Sbjct: 118 GHDIIGLAQTGSGKTAAFAIPILNRLWHDQE------PYYACILAPTRELAQQIKETFDS 171
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R +VGG++MM Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+D
Sbjct: 172 LGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMD 231
Query: 129 EADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL +IP + R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 232 EADRLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQ 291
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL Q VP K+ YL+Y+L E + ++FTRT L+ + L A +
Sbjct: 292 TVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATAL 351
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++Q++R+GAL+ FKAG+ +IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGR
Sbjct: 352 HGDLNQNQRMGALDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGR 411
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
TARAGR+G +ISLV+QY+LE L+IE+++GKKLP+ ++ +L L + V +A
Sbjct: 412 TARAGRSGKSISLVSQYDLELILRIEEVLGKKLPKESVDKNIILTLRDSVDKA 464
>gi|160358662|sp|A6ZSX1.1|RRP3_YEAS7 RecName: Full=ATP-dependent rRNA helicase RRP3; AltName:
Full=Ribosomal RNA-processing protein 3
gi|151944009|gb|EDN62302.1| ribosomal RNA processing protein [Saccharomyces cerevisiae YJM789]
gi|190405848|gb|EDV09115.1| weak RNA-dependent ATPase activity which is not specific for rRNA
[Saccharomyces cerevisiae RM11-1a]
gi|256270568|gb|EEU05749.1| Rrp3p [Saccharomyces cerevisiae JAY291]
gi|323333235|gb|EGA74633.1| Rrp3p [Saccharomyces cerevisiae AWRI796]
Length = 501
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/353 (54%), Positives = 256/353 (72%), Gaps = 7/353 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLAQTGSGKT AFA+PIL L E ++AC+L+PTRELA QI E F++
Sbjct: 118 GHDIIGLAQTGSGKTAAFAIPILNRLWHDQE------PYYACILAPTRELAQQIKETFDS 171
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R +VGG++MM Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+D
Sbjct: 172 LGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMD 231
Query: 129 EADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL +IP + R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 232 EADRLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQ 291
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL Q VP K+ YL+Y+L E + ++FTRT L+ + L A +
Sbjct: 292 TVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATAL 351
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++Q++R+GAL+ FKAG+ +IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGR
Sbjct: 352 HGDLNQNQRMGALDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGR 411
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
TARAGR+G +ISLV+QY+LE L+IE+++GKKLP+ ++ +L L + V +A
Sbjct: 412 TARAGRSGKSISLVSQYDLELILRIEEVLGKKLPKESVDKNIILTLRDSVDKA 464
>gi|323304679|gb|EGA58441.1| Rrp3p [Saccharomyces cerevisiae FostersB]
Length = 543
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/390 (51%), Positives = 268/390 (68%), Gaps = 15/390 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLAQTGSGKT AFA+PIL L E ++AC+L+PTRELA QI E F++
Sbjct: 160 GHDIIGLAQTGSGKTAAFAIPILNRLWHDQE------PYYACILAPTRELAQQIKETFDS 213
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R +VGG++MM Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+D
Sbjct: 214 LGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMD 273
Query: 129 EADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL +IP + R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 274 EADRLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQ 333
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL Q VP K+ YL+Y+L E + ++FTRT L+ + L A +
Sbjct: 334 TVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATAL 393
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++Q++R+GAL+ FKAG+ +IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGR
Sbjct: 394 HGDLNQNQRMGALDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGR 453
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLL--------ERVTE 359
TARAGR+G +ISLV+QY+LE L+IE+++GKKLP+ ++ +L L E V E
Sbjct: 454 TARAGRSGKSISLVSQYDLELILRIEEVLGKKLPKESVDKNIILTLRGSVDKANGEVVME 513
Query: 360 AKRISQMTIKDSGNKRRRKGGDEDDDIGRQ 389
R ++ I +R R E+ D+G +
Sbjct: 514 MNRRNKEKIARGKGRRGRMMTRENMDMGER 543
>gi|487961|gb|AAB68392.1| Yhr065cp [Saccharomyces cerevisiae]
Length = 543
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/353 (54%), Positives = 256/353 (72%), Gaps = 7/353 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLAQTGSGKT AFA+PIL L E ++AC+L+PTRELA QI E F++
Sbjct: 160 GHDIIGLAQTGSGKTAAFAIPILNRLWHDQE------PYYACILAPTRELAQQIKETFDS 213
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R +VGG++MM Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+D
Sbjct: 214 LGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMD 273
Query: 129 EADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL +IP + R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 274 EADRLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQ 333
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL Q VP K+ YL+Y+L E + ++FTRT L+ + L A +
Sbjct: 334 TVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATAL 393
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++Q++R+G+L+ FKAG+ +IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGR
Sbjct: 394 HGDLNQNQRMGSLDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGR 453
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
TARAGR+G +ISLV+QY+LE L+IE+++GKKLP+ ++ +L L + V +A
Sbjct: 454 TARAGRSGKSISLVSQYDLELILRIEEVLGKKLPKESVDKNIILTLRDSVDKA 506
>gi|37362659|ref|NP_011932.2| RNA-dependent ATPase RRP3 [Saccharomyces cerevisiae S288c]
gi|81175193|sp|P38712.2|RRP3_YEAST RecName: Full=ATP-dependent rRNA helicase RRP3; AltName:
Full=Ribosomal RNA-processing protein 3
gi|285809971|tpg|DAA06758.1| TPA: RNA-dependent ATPase RRP3 [Saccharomyces cerevisiae S288c]
gi|392298867|gb|EIW09962.1| Rrp3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 501
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/353 (54%), Positives = 256/353 (72%), Gaps = 7/353 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLAQTGSGKT AFA+PIL L E ++AC+L+PTRELA QI E F++
Sbjct: 118 GHDIIGLAQTGSGKTAAFAIPILNRLWHDQE------PYYACILAPTRELAQQIKETFDS 171
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R +VGG++MM Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+D
Sbjct: 172 LGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMD 231
Query: 129 EADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL +IP + R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 232 EADRLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQ 291
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL Q VP K+ YL+Y+L E + ++FTRT L+ + L A +
Sbjct: 292 TVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATAL 351
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++Q++R+G+L+ FKAG+ +IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGR
Sbjct: 352 HGDLNQNQRMGSLDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGR 411
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
TARAGR+G +ISLV+QY+LE L+IE+++GKKLP+ ++ +L L + V +A
Sbjct: 412 TARAGRSGKSISLVSQYDLELILRIEEVLGKKLPKESVDKNIILTLRDSVDKA 464
>gi|410079330|ref|XP_003957246.1| hypothetical protein KAFR_0D04630 [Kazachstania africana CBS 2517]
gi|372463831|emb|CCF58111.1| hypothetical protein KAFR_0D04630 [Kazachstania africana CBS 2517]
Length = 487
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/353 (54%), Positives = 258/353 (73%), Gaps = 7/353 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKT AFA+PIL +L +P ++AC+LSPTRELA QI E F++
Sbjct: 104 GKDIIGLAQTGSGKTAAFAIPILNSLW-----HDQLP-YYACILSPTRELAQQIKETFDS 157
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R +VGG++MM Q L ++PHI++ATPGRLMDHL NT+GFSL L+YLV+D
Sbjct: 158 LGSLMGVRTVCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTRGFSLRKLRYLVMD 217
Query: 129 EADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL ++P R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 218 EADRLLDMEFGPVLDRILKILPTEGRTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQ 277
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL Q VP K+ +L+Y+L E + ++FTRT +A + L A +
Sbjct: 278 TVDTLVQTLMVVPGGLKNTFLIYLLNEFHGKTFIIFTRTKANAERIAGLANLLEFNATAL 337
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++Q++R GAL+ FKAG+ +IL+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRVGR
Sbjct: 338 HGDLNQNQRTGALDLFKAGKRSILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGR 397
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
TARAGR+G +ISLV+QY+LE L+IE+++GKKLP+ +++ +L L + V +A
Sbjct: 398 TARAGRSGKSISLVSQYDLELILRIEEVLGKKLPKESVDKDIILSLRDSVDKA 450
>gi|323308818|gb|EGA62055.1| Rrp3p [Saccharomyces cerevisiae FostersO]
Length = 501
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/390 (51%), Positives = 268/390 (68%), Gaps = 15/390 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLAQTGSGKT AFA+PIL L E ++AC+L+PTRELA QI E F++
Sbjct: 118 GHDIIGLAQTGSGKTAAFAIPILNRLWHDQE------PYYACILAPTRELAQQIKETFDS 171
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R +VGG++MM Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+D
Sbjct: 172 LGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMD 231
Query: 129 EADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL +IP + R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 232 EADRLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQ 291
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL Q VP K+ YL+Y+L E + ++FTRT L+ + L A +
Sbjct: 292 TVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATAL 351
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++Q++R+GAL+ FKAG+ +IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGR
Sbjct: 352 HGDLNQNQRMGALDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGR 411
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLL--------ERVTE 359
TARAGR+G +ISLV+QY+LE L+IE+++GKKLP+ ++ +L L E V E
Sbjct: 412 TARAGRSGKSISLVSQYDLELILRIEEVLGKKLPKESVDKNIILTLRXSVDKANGEVVME 471
Query: 360 AKRISQMTIKDSGNKRRRKGGDEDDDIGRQ 389
R ++ I +R R E+ D+G +
Sbjct: 472 MNRRNKEKIARGKGRRGRMMTRENMDMGER 501
>gi|357490507|ref|XP_003615541.1| ATP-dependent RNA helicase [Medicago truncatula]
gi|355516876|gb|AES98499.1| ATP-dependent RNA helicase [Medicago truncatula]
Length = 398
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/374 (53%), Positives = 264/374 (70%), Gaps = 7/374 (1%)
Query: 11 DLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALG 70
D+IG++ SGK GAF LPILQALLE N T FACVLSP+R+L +I+E F+ LG
Sbjct: 23 DVIGISPPRSGKAGAFVLPILQALLEAGPNLNTS---FACVLSPSRDLVFRIAEYFQVLG 79
Query: 71 SGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEA 130
S ++CA LV D++ QT + ++PH++V T ++ HL T+GFSL LKYLV+ EA
Sbjct: 80 SQFGVKCATLVEANDIIDQTNQILQQPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEA 139
Query: 131 DRLLNDDFE-KSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
D LLND FE + L++IL++IP R+T+LFS+TMT+KV +QR L+NP+KI+ +SKYSTV
Sbjct: 140 DLLLNDQFEEQQLNDILSIIPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTV 199
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
T QQ F+PA KDCYLVYILTE++ + VFT+TC + LLAL+L+NL RAIPI
Sbjct: 200 VTQLQQSCFMPAMLKDCYLVYILTEMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIIS 259
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+MSQ+K+LGALN FK+G+ NIL+C++ A RGLDIP+VDMVINY+IP + DY+HRVG T
Sbjct: 260 YMSQAKKLGALNAFKSGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWT- 318
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK 369
G AIS VN YE IE+ GKKLP +PA E VLL V EA+R+++ IK
Sbjct: 319 --GHVNAAISFVNPYEAGQLEMIERHTGKKLPVYPAPCENVLLWRGTVREAERLARKEIK 376
Query: 370 DSGNKRRRKGGDED 383
+SG K GDE+
Sbjct: 377 ESGWKSGGYLGDEE 390
>gi|357490505|ref|XP_003615540.1| ATP-dependent RNA helicase [Medicago truncatula]
gi|355516875|gb|AES98498.1| ATP-dependent RNA helicase [Medicago truncatula]
Length = 417
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/374 (53%), Positives = 264/374 (70%), Gaps = 7/374 (1%)
Query: 11 DLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALG 70
D+IG++ SGK GAF LPILQALLE N T FACVLSP+R+L +I+E F+ LG
Sbjct: 42 DVIGISPPRSGKAGAFVLPILQALLEAGPNLNTS---FACVLSPSRDLVFRIAEYFQVLG 98
Query: 71 SGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEA 130
S ++CA LV D++ QT + ++PH++V T ++ HL T+GFSL LKYLV+ EA
Sbjct: 99 SQFGVKCATLVEANDIIDQTNQILQQPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEA 158
Query: 131 DRLLNDDFE-KSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
D LLND FE + L++IL++IP R+T+LFS+TMT+KV +QR L+NP+KI+ +SKYSTV
Sbjct: 159 DLLLNDQFEEQQLNDILSIIPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTV 218
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
T QQ F+PA KDCYLVYILTE++ + VFT+TC + LLAL+L+NL RAIPI
Sbjct: 219 VTQLQQSCFMPAMLKDCYLVYILTEMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIIS 278
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+MSQ+K+LGALN FK+G+ NIL+C++ A RGLDIP+VDMVINY+IP + DY+HRVG T
Sbjct: 279 YMSQAKKLGALNAFKSGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWT- 337
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK 369
G AIS VN YE IE+ GKKLP +PA E VLL V EA+R+++ IK
Sbjct: 338 --GHVNAAISFVNPYEAGQLEMIERHTGKKLPVYPAPCENVLLWRGTVREAERLARKEIK 395
Query: 370 DSGNKRRRKGGDED 383
+SG K GDE+
Sbjct: 396 ESGWKSGGYLGDEE 409
>gi|401625423|gb|EJS43432.1| rrp3p [Saccharomyces arboricola H-6]
Length = 500
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/353 (55%), Positives = 255/353 (72%), Gaps = 7/353 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLAQTGSGKT AFA+PIL L E ++AC+L+PTRELA QI E F++
Sbjct: 117 GHDIIGLAQTGSGKTAAFAIPILNRLWHDQE------PYYACILAPTRELAQQIKEAFDS 170
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R +VGG++MM Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+D
Sbjct: 171 LGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMD 230
Query: 129 EADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL +IP + R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 231 EADRLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQ 290
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL Q VP K+ YLVY+L E + ++FTRT L+ + L A +
Sbjct: 291 TVDTLVQTLMVVPGGLKNTYLVYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATAL 350
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++Q++R+GAL+ FKAG+ IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGR
Sbjct: 351 HGDLNQNQRMGALDLFKAGKRAILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGR 410
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
TARAGR+G +ISLV+QY+LE L+IE+++GKKLP+ ++ +L L + V +A
Sbjct: 411 TARAGRSGKSISLVSQYDLELILRIEEVLGKKLPKENVDKNIILTLRDSVDKA 463
>gi|254580545|ref|XP_002496258.1| ZYRO0C14234p [Zygosaccharomyces rouxii]
gi|238939149|emb|CAR27325.1| ZYRO0C14234p [Zygosaccharomyces rouxii]
Length = 494
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/355 (56%), Positives = 261/355 (73%), Gaps = 11/355 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLAQTGSGKT AFA+PIL L E + ++ACVL+PTRELA Q E F++
Sbjct: 109 GRDIIGLAQTGSGKTAAFAIPILNRLWEDKQ------PYYACVLAPTRELAQQTKETFDS 162
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ + +R +VGG++MM Q L ++PHI++ATPGRLMDHL NTKGFSL L++LV+D
Sbjct: 163 LGALMGVRSTCIVGGMNMMDQARELMRKPHIIIATPGRLMDHLENTKGFSLRKLRFLVMD 222
Query: 129 EADRLLNDDFEKSLDEILNVIPRM-RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD+IL VIP R TYLFSATMT K+ KLQRA L PVK ++KY
Sbjct: 223 EADRLLDMEFGPVLDKILKVIPTQDRTTYLFSATMTSKIDKLQRASLTEPVKCAVSNKYQ 282
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRT-CDATRLLALMLRNLGQ-RAI 245
TVDTL Q VP+ K+ YL+Y+L E + ++FTRT +A RL AL NL + A
Sbjct: 283 TVDTLVQTLMVVPSGLKNTYLIYLLNENIGKTVIIFTRTKANAERLSALC--NLLEFNAT 340
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G ++Q++R GAL+ FKAG +IL+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRV
Sbjct: 341 ALHGDLNQNQRTGALDLFKAGRRSILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRV 400
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
GRTARAGR+G +ISLV+QY+LE L+IE+++GKKLP+ ++E V+ L + V +A
Sbjct: 401 GRTARAGRSGKSISLVSQYDLELILRIEEVLGKKLPKENCDKEVVISLRDSVDKA 455
>gi|365760375|gb|EHN02100.1| Rrp3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 503
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/353 (54%), Positives = 256/353 (72%), Gaps = 7/353 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLAQTGSGKT AFA+PIL L E ++AC+L+PTRELA QI E F++
Sbjct: 120 GHDIIGLAQTGSGKTAAFAIPILNRLWHDQE------PYYACILAPTRELAQQIKEAFDS 173
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R +VGG++MM Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+D
Sbjct: 174 LGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMD 233
Query: 129 EADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL +IP + R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 234 EADRLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQ 293
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL Q VP K+ YL+Y+L E + ++FTRT L+ + L A +
Sbjct: 294 TVDTLVQALMVVPGGLKNTYLIYLLNESIGKTMIIFTRTKANAERLSGLCNLLEFSATAL 353
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++Q++R+GAL+ FKAG+ +IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGR
Sbjct: 354 HGDLNQNQRMGALDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGR 413
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
TARAGR+G +ISLV+QY+LE L+IE+++G+KLP+ ++ +L L + V +A
Sbjct: 414 TARAGRSGKSISLVSQYDLELILRIEEVLGRKLPKENVDKSIILTLRDSVDKA 466
>gi|167375363|ref|XP_001733609.1| ATP-dependent rRNA helicase RRP3 [Entamoeba dispar SAW760]
gi|165905196|gb|EDR30262.1| ATP-dependent rRNA helicase RRP3, putative [Entamoeba dispar
SAW760]
Length = 432
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/358 (53%), Positives = 252/358 (70%), Gaps = 7/358 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
KD+IG+AQTGSGKT +F LP++Q LL + E R AF+ ++ PTRELA Q+ E + +
Sbjct: 47 KDIIGIAQTGSGKTASFLLPMIQHLLNVKEKNR---AFYCIIIEPTRELAAQVVEVLDEI 103
Query: 70 GSGI-SLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGF--SLGTLKYLV 126
G + L +LVGG+D+M+Q++ L KRPH++V TPGR++ H+ NTKG S+ +K+LV
Sbjct: 104 GKALPGLMSCLLVGGMDVMKQSIQLAKRPHVIVGTPGRIVYHIKNTKGVEESIQKVKFLV 163
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKI-EAASK 185
+DEAD+LL DF +D ++ +P R T LFSATM+ KV+KLQRA L +PVKI E K
Sbjct: 164 IDEADKLLEMDFANEIDYLIEKLPSQRTTMLFSATMSTKVEKLQRASLTHPVKIKEEEQK 223
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
Y TVDTL+Q+Y F+P KY+D YL+ IL E S ++FT C L +MLR LG AI
Sbjct: 224 YQTVDTLRQEYCFIPFKYRDGYLLSILKETEGKSIIIFTMKCSGCTKLVMMLRQLGYAAI 283
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
P+ G MSQ KRL AL KFK+G+ IL+ TDVASRGLDIP+VD+VINYD P KDYIHRV
Sbjct: 284 PLHGKMSQQKRLIALEKFKSGKRGILVATDVASRGLDIPNVDIVINYDCPLEPKDYIHRV 343
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRI 363
GRTARAG++G AI+LV QY +E Y +IE +I KKL E+ E+E + ++ +A RI
Sbjct: 344 GRTARAGKSGYAITLVTQYSIELYQRIETMIEKKLNEYKVNEKEAIAYSQKANDAMRI 401
>gi|406696099|gb|EKC99395.1| ATP-dependent RNA helicase [Trichosporon asahii var. asahii CBS
8904]
Length = 436
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/363 (53%), Positives = 258/363 (71%), Gaps = 31/363 (8%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+AQTGS A +L+ R + I++Q +A
Sbjct: 61 GRDIIGIAQTGS----------------------------AVLLAHPR--SDSIAKQVQA 90
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ I +R AV+VGG+DMM Q++AL KRPHI+VATPGRLMDHL NTKGFSL LKYLVLD
Sbjct: 91 LGAPIGVRTAVIVGGMDMMSQSIALSKRPHIIVATPGRLMDHLENTKGFSLKALKYLVLD 150
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +D++L VIP+ R T+LFSAT++ KV+KL+RA L P++++ SKYST
Sbjct: 151 EADRLLDLDFGPIIDKLLKVIPKERNTFLFSATLSTKVEKLKRASLNKPIQVKVDSKYST 210
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y F P KD YL Y++ E+S+SS ++FT T D + L++ML LG AIP+
Sbjct: 211 VSTLMQYYVFFPEVQKDAYLFYLVNELSSSSMIIFTSTVDRAQRLSIMLNRLGYPAIPLH 270
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVI-NYDIPTNSKDYIHRVGR 307
G MSQS RLG+LNKFK+G IL+ TDVASRGLDIPSVD+VI N+DIP+NSKDY+HRVGR
Sbjct: 271 GQMSQSARLGSLNKFKSGGRKILVATDVASRGLDIPSVDLVIQNFDIPSNSKDYVHRVGR 330
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAGR+G +I+LV QY++ IE IG++LP F ++E V +L +RV EA R +++
Sbjct: 331 TARAGRSGKSITLVTQYDVVMLKGIEAAIGRQLPAFDCDKEAVAILSDRVNEAARAARIE 390
Query: 368 IKD 370
+++
Sbjct: 391 MRE 393
>gi|167384217|ref|XP_001736854.1| ATP-dependent rRNA helicase RRP3 [Entamoeba dispar SAW760]
gi|165900561|gb|EDR26857.1| ATP-dependent rRNA helicase RRP3, putative [Entamoeba dispar
SAW760]
Length = 432
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/358 (53%), Positives = 252/358 (70%), Gaps = 7/358 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
KD+IG+AQTGSGKT +F LP++Q LL + E R AF+ ++ PTRELA Q+ E + +
Sbjct: 47 KDIIGIAQTGSGKTASFLLPMIQHLLNVKEKNR---AFYCIIIEPTRELAAQVVEVLDEI 103
Query: 70 GSGI-SLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGF--SLGTLKYLV 126
G + L +LVGG+D+M+Q++ L KRPH++V TPGR++ H+ NTKG S+ +K+LV
Sbjct: 104 GKALPGLMSCLLVGGMDVMKQSVQLAKRPHVIVGTPGRIVYHIKNTKGVEESIQKVKFLV 163
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKI-EAASK 185
+DEAD+LL DF +D ++ +P R T LFSATM+ KV+KLQRA L +PVKI E K
Sbjct: 164 IDEADKLLEMDFANEIDYLIEKLPSQRTTMLFSATMSTKVEKLQRASLTHPVKIKEEEQK 223
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
Y TVDTL+Q+Y F+P KY+D YL+ IL E S ++FT C L +MLR LG AI
Sbjct: 224 YQTVDTLRQEYCFIPFKYRDGYLLSILKETEGKSIIIFTMKCSGCTKLVMMLRQLGYAAI 283
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
P+ G MSQ KRL AL KFK+G+ IL+ TDVASRGLDIP+VD+VINYD P KDYIHRV
Sbjct: 284 PLHGKMSQQKRLIALEKFKSGKRGILVATDVASRGLDIPNVDIVINYDCPLEPKDYIHRV 343
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRI 363
GRTARAG++G AI+LV QY +E Y +IE +I KKL E+ E+E + ++ +A RI
Sbjct: 344 GRTARAGKSGYAITLVTQYSIELYQRIETMIEKKLNEYKVNEKEAIAYSQKANDAMRI 401
>gi|367014487|ref|XP_003681743.1| hypothetical protein TDEL_0E02890 [Torulaspora delbrueckii]
gi|359749404|emb|CCE92532.1| hypothetical protein TDEL_0E02890 [Torulaspora delbrueckii]
Length = 501
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/386 (52%), Positives = 263/386 (68%), Gaps = 15/386 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKT AFALPIL L ++AC+LSPTRELA QI E F++
Sbjct: 118 GKDIIGLAQTGSGKTAAFALPILNRLWHDQS------PYYACILSPTRELAQQIKETFDS 171
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ + R +VGG++MM Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+D
Sbjct: 172 LGTIMGARTTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMD 231
Query: 129 EADRLLNDDFEKSLDEILNVIPRM-RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL +IP R TYLFSATMT K+ KLQRA L +PVK ++KY
Sbjct: 232 EADRLLDMEFGPVLDRILKIIPTQGRTTYLFSATMTSKIDKLQRASLTDPVKCAVSNKYQ 291
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL Q VP K+ +L+Y+L E +T++FTRT ++ + L A +
Sbjct: 292 TVDTLVQTLMVVPGGLKNTFLIYLLNEFIGKTTIIFTRTKANAERISGLCNLLEFNATAL 351
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++Q++R GAL+ FKAG +IL+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRVGR
Sbjct: 352 HGDLNQNQRTGALDLFKAGRRSILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGR 411
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLL--------ERVTE 359
TARAGR+G +ISLV+QY+LE L+IE+++GKKLP+ + + V+ L E + E
Sbjct: 412 TARAGRSGKSISLVSQYDLELILRIEEVLGKKLPKENVDRDLVMSLRNSVDKANGEVIME 471
Query: 360 AKRISQMTIKDSGNKRRRKGGDEDDD 385
R ++ I SG +R R D D
Sbjct: 472 LNRRNKEKIARSGGRRSRMAARMDMD 497
>gi|156837514|ref|XP_001642781.1| hypothetical protein Kpol_1005p11 [Vanderwaltozyma polyspora DSM
70294]
gi|160358661|sp|A7TS37.1|RRP3_VANPO RecName: Full=ATP-dependent rRNA helicase RRP3
gi|156113348|gb|EDO14923.1| hypothetical protein Kpol_1005p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 506
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/355 (55%), Positives = 258/355 (72%), Gaps = 11/355 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLAQTGSGKT AFA+PIL L + ++AC+L+PTRELA QI E F++
Sbjct: 123 GHDIIGLAQTGSGKTAAFAIPILNRLWHDQQ------PYYACILAPTRELAQQIKETFDS 176
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R A +VGG++MM Q L ++PHI++ATPGRLMDHL NT+GFSL LK+LV+D
Sbjct: 177 LGSLMGVRSACIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTRGFSLRKLKFLVMD 236
Query: 129 EADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL +IP + R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 237 EADRLLDMEFGPVLDRILKIIPTQGRTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQ 296
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRT-CDATRLLALMLRNLGQ-RAI 245
TVDTL Q VP K+ YL+Y++ E + +VFTRT +A R+ L NL + A
Sbjct: 297 TVDTLVQTLIVVPGGLKNTYLIYLMNEFIGKTIIVFTRTKANAERITTLA--NLLEFSAT 354
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G ++Q++R G+L+ FKAG +IL+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRV
Sbjct: 355 ALHGDLNQNQRTGSLDLFKAGRRSILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRV 414
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
GRTARAGR+G +ISLV+QY+LE L+IE ++GKKLP+ ++ +L L + V +A
Sbjct: 415 GRTARAGRSGKSISLVSQYDLELILRIEDVLGKKLPKENVNKDAILTLRDSVDKA 469
>gi|409080848|gb|EKM81208.1| hypothetical protein AGABI1DRAFT_119719 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 398
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/376 (52%), Positives = 265/376 (70%), Gaps = 25/376 (6%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+G+D+IG+A TGSGKT AFALPIL L + ++ FA VLSPTRELA QIS QFE
Sbjct: 43 SGRDIIGIAPTGSGKTIAFALPILHRLWDNPQSN------FALVLSPTRELAYQISAQFE 96
Query: 68 ALGSGISLRCAVLVGGV-DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLV 126
ALG+ + +R V+VGG D +QQ + L K+PHI+VATPGRL DHL +TKGFSL LK+LV
Sbjct: 97 ALGAAMGVRSVVIVGGEEDRVQQAVRLAKKPHIIVATPGRLHDHLNSTKGFSLRQLKHLV 156
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-K 185
LDEADRL IPR R TYLFSATMT V KLQRA L +PV+++ +S K
Sbjct: 157 LDEADRL--------------AIPRERSTYLFSATMTANVTKLQRASLTDPVRVDVSSFK 202
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
Y TV +L Q Y P K+ LVY++ ++ ++ +VF RT + L+++LR L +A+
Sbjct: 203 YKTVPSLLQYYVLCPLVNKEVMLVYLINSMAQNTIIVFVRTVADAKRLSIVLRTLEFQAV 262
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
P+ G +SQS+RLGA N+FK+G+ NIL+ TD+ASRGLD+ +VD+VINYD PT+SKDY+HRV
Sbjct: 263 PLHGELSQSQRLGAFNRFKSGKSNILVATDLASRGLDVANVDVVINYDTPTSSKDYVHRV 322
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
GRTARAGR G +I +V+QY+ E L++E + +KL +P E EE+ LL ERV E R+++
Sbjct: 323 GRTARAGRAGKSILMVSQYDAEVMLRLEMALERKLELYPTEAEEIALLKERVYEVGRVAR 382
Query: 366 MTIKD---SGNKRRRK 378
IK+ S N+RR++
Sbjct: 383 NQIKEDDMSQNERRKR 398
>gi|363750628|ref|XP_003645531.1| hypothetical protein Ecym_3217 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889165|gb|AET38714.1| Hypothetical protein Ecym_3217 [Eremothecium cymbalariae
DBVPG#7215]
Length = 486
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/353 (54%), Positives = 252/353 (71%), Gaps = 7/353 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLAQTGSGKT AFA+PIL L + ++AC+L+PTRELA QI E F++
Sbjct: 103 GNDIIGLAQTGSGKTAAFAIPILNQLWHDQQ------PYYACILAPTRELAQQIKETFDS 156
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R ++GG++MM Q L ++PHI++ATPGRLMDHL NTKGFSL L++LV+D
Sbjct: 157 LGSLMGVRSTCIMGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLRFLVID 216
Query: 129 EADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL IP + R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 217 EADRLLDMEFGAVLDRILKNIPTKGRTTYLFSATMTSKIDKLQRASLTNPVKCSVSNKYQ 276
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL Q VP K+ YL+Y+L E ST+VFTRT ++ + L A +
Sbjct: 277 TVDTLIQTLMVVPGGLKNTYLIYLLNEFIGKSTIVFTRTKANAERISGLCNLLEFSATAL 336
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++Q++R GAL+ FKAG +IL+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRVGR
Sbjct: 337 HGDLNQNQRTGALDLFKAGRRSILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGR 396
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
TARAGR+G +ISLV+QY+LE L+IE ++GKKLP+ + +L L + V +A
Sbjct: 397 TARAGRSGKSISLVSQYDLELILRIEDVLGKKLPKEDINKNMILSLRDSVDKA 449
>gi|302306296|ref|NP_982501.2| AAL041Cp [Ashbya gossypii ATCC 10895]
gi|442570013|sp|Q75EW9.2|RRP3_ASHGO RecName: Full=ATP-dependent rRNA helicase RRP3
gi|299788450|gb|AAS50325.2| AAL041Cp [Ashbya gossypii ATCC 10895]
gi|374105700|gb|AEY94611.1| FAAL041Cp [Ashbya gossypii FDAG1]
Length = 486
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/374 (52%), Positives = 266/374 (71%), Gaps = 9/374 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKT AFA+PIL L + ++AC+L+PTRELA QI E F++
Sbjct: 103 GKDIIGLAQTGSGKTAAFAIPILNRLWHDQQ------PYYACILAPTRELAQQIKETFDS 156
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R +VGG++MM Q L ++PHI++ATPGRLMDHL NTKGF+L L++LV+D
Sbjct: 157 LGSLMGVRTTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFALRKLQFLVMD 216
Query: 129 EADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL IP + R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 217 EADRLLDMEFGPVLDRILKNIPTKGRTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQ 276
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL Q VP K+ +L+Y+L E +T+VFTRT ++ + L A +
Sbjct: 277 TVDTLVQTLIVVPGGLKNTFLIYLLNEFIGKTTIVFTRTKANAERISGLCNLLEFSATAL 336
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++Q++R GAL+ FKAG+ +IL+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRVGR
Sbjct: 337 HGDLNQNQRTGALDLFKAGKKSILVATDVAARGLDIPSVDLVINYDIPVDSKSYIHRVGR 396
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA--KRISQ 365
TARAGR+G ++SLV+QY+LE L+IE+++GKKLP+ ++ VL L + V +A + I +
Sbjct: 397 TARAGRSGKSVSLVSQYDLELILRIEEVLGKKLPKENVDKSIVLSLRDSVDKANGEVIME 456
Query: 366 MTIKDSGNKRRRKG 379
+ ++ + R KG
Sbjct: 457 LNRRNKEKQTRGKG 470
>gi|255716462|ref|XP_002554512.1| KLTH0F07106p [Lachancea thermotolerans]
gi|238935895|emb|CAR24075.1| KLTH0F07106p [Lachancea thermotolerans CBS 6340]
Length = 525
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/353 (54%), Positives = 252/353 (71%), Gaps = 7/353 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKT AFA+PIL L + ++ACVL+PTRELA QI E F++
Sbjct: 142 GKDIIGLAQTGSGKTAAFAIPILNQLWHDQQ------PYYACVLAPTRELAQQIKETFDS 195
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + +R +VGG++M+ Q L ++PHI++ATPGRLMDHL NTKGFS+ LK+LV+D
Sbjct: 196 LGGAMGVRTTCIVGGMNMIDQARDLMRKPHIIIATPGRLMDHLENTKGFSMRKLKFLVMD 255
Query: 129 EADRLLNDDFEKSLDEILNVIPRM-RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL +IP R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 256 EADRLLDMEFGPVLDRILKIIPTQGRTTYLFSATMTSKIDKLQRASLTNPVKCAVSTKYQ 315
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL Q VP K+ +L+Y+L E + +VFTRT +A + L A +
Sbjct: 316 TVDTLIQTLMVVPGGLKNTFLIYLLNEFLGKTAIVFTRTKANAERIATLCNLLEFSATAL 375
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++Q++R GAL+ FKAG +IL+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRVGR
Sbjct: 376 HGDLNQNQRTGALDLFKAGRRSILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGR 435
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
TARAGR+G +ISLV+QY+LE L+IE ++G+KLP+ ++ +L L + V +A
Sbjct: 436 TARAGRSGKSISLVSQYDLELILRIEDVLGRKLPKENVDKGVILSLRDTVDKA 488
>gi|388514089|gb|AFK45106.1| unknown [Medicago truncatula]
Length = 428
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/381 (53%), Positives = 266/381 (69%), Gaps = 14/381 (3%)
Query: 11 DLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALG 70
D+IG++ SGK GAF LPILQALLE N T FACVLSP+R+L +I+E F+ LG
Sbjct: 46 DVIGISPPRSGKAGAFVLPILQALLEAGPNLNTS---FACVLSPSRDLVFRIAEYFQVLG 102
Query: 71 SGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEA 130
S ++CA LV D++ QT + ++PH++V T ++ HL T+GFSL LKYLV+ EA
Sbjct: 103 SQFGVKCATLVEANDIIDQTNQILQQPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEA 162
Query: 131 DRLLNDDFE-KSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
D LLND FE + L++IL++IP R+T+LFS+TMT+KV +QR L+NP+KI+ +SKYSTV
Sbjct: 163 DLLLNDQFEEQQLNDILSIIPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTV 222
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
T QQ F+PA KDCYLVYILTE++ + VFT+TC + LLAL+L+NL RAIPI
Sbjct: 223 VTQLQQSCFMPAMLKDCYLVYILTEMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIIS 282
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+MSQ+K+LGALN FK+G+ NIL+C++ A RGLDIP+VDMVINY+IP + DY+HRVG T
Sbjct: 283 YMSQAKKLGALNAFKSGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWT- 341
Query: 310 RAGRTGVAISLVNQYE---LEWY----LQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
G AIS VN YE LE +Q+ GKKLP +PA E VLL V EA+R
Sbjct: 342 --GHVNAAISFVNPYEAGQLEMIERHTVQVFYFSGKKLPVYPAPCENVLLWRGTVREAER 399
Query: 363 ISQMTIKDSGNKRRRKGGDED 383
+++ IK+SG K GDE+
Sbjct: 400 LARKEIKESGWKSGGYLGDEE 420
>gi|67477952|ref|XP_654408.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|56471449|gb|EAL49018.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449703981|gb|EMD44318.1| ATP-dependent rRNA helicase RRP3, putative [Entamoeba histolytica
KU27]
Length = 432
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/358 (51%), Positives = 251/358 (70%), Gaps = 7/358 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
KD+IG+AQTGSGKT +F LP++Q LL + E R F+ ++ PTRELA Q+ E + +
Sbjct: 47 KDIIGIAQTGSGKTASFLLPMVQHLLNVKEKNR---GFYCIIIEPTRELAAQVVEVIDEM 103
Query: 70 GSGI-SLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGF--SLGTLKYLV 126
G + L +LVGG+D+M+Q++ L KRP ++V TPGR++ H+ NTKG S+ +K+LV
Sbjct: 104 GKALPGLTSCLLVGGMDVMKQSVQLAKRPQVIVGTPGRIVYHIKNTKGVEESIEKVKFLV 163
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKI-EAASK 185
+DEAD+LL DF +D ++ +P+ R T LFSATM+ KV+KLQRA L +PVKI E K
Sbjct: 164 IDEADKLLEMDFANEIDYLIEKLPKQRTTMLFSATMSTKVEKLQRASLTHPVKIKEEEQK 223
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
Y TVDTL+Q+Y F+P KY+D YL+ IL E + ++FT C L +MLR +G AI
Sbjct: 224 YQTVDTLRQEYCFIPFKYRDGYLISILKETEGKTIIIFTMKCSGCTKLVMMLRQMGYAAI 283
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
P+ G MSQ KRL AL KFK+G+ IL+ TDVASRGLDIP+VD+VINYD P KDY+HRV
Sbjct: 284 PLHGKMSQQKRLIALEKFKSGKRGILVATDVASRGLDIPNVDIVINYDCPLEPKDYVHRV 343
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRI 363
GRTARAG++G AI+LV QY +E Y +IE +I KKL E+ E+E + ++ EA R+
Sbjct: 344 GRTARAGKSGYAITLVTQYSIELYQRIETMIEKKLNEYKVNEKEAIAYSQKANEAMRV 401
>gi|401400548|ref|XP_003880804.1| dead box polypeptide 27, related [Neospora caninum Liverpool]
gi|325115216|emb|CBZ50771.1| dead box polypeptide 27, related [Neospora caninum Liverpool]
Length = 462
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/393 (49%), Positives = 267/393 (67%), Gaps = 18/393 (4%)
Query: 2 LLWFCDAGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQ 61
+L + G+D+I LA+TGSGKT AF LPILQ LL+ QR F+A +L+PTREL +Q
Sbjct: 63 VLPYALQGRDIIALAETGSGKTAAFGLPILQQLLQ--RTQR----FYALILAPTRELCLQ 116
Query: 62 ISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGT 121
IS+Q A+G + + LVGG+D Q +AL K+PH+VV +PGR++DHL TKGFSL +
Sbjct: 117 ISQQMLAMGGSLGVTVVTLVGGLDHNTQAIALAKKPHVVVGSPGRVVDHLQQTKGFSLKS 176
Query: 122 LKYLVLDEADRLLNDDFEKSLDEILNVI--PRMRQTYLFSATMTKKVKKLQRACLKNPVK 179
+K LVLDEADRLL+ DF+ +L +L + P RQT LFSATMT KV KLQ+A LK PVK
Sbjct: 177 VKVLVLDEADRLLSLDFDAALQVLLEHVGSPAERQTMLFSATMTTKVSKLQKASLKKPVK 236
Query: 180 IEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRN 239
+E SKY L+Q + VP K K +L L +S SS +VFT TC R +AL LR+
Sbjct: 237 LEVNSKYDVASLLQQHFLLVPFKLKHTHLAAALLHLSPSSVIVFTNTCANARTIALFLRH 296
Query: 240 LGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSK 299
LG +++ + G M+Q +R+GAL KF+A E + L+ T+V SRGLDIP V MVIN+D+P +SK
Sbjct: 297 LGFQSVCLHGKMTQPQRIGALTKFRAAETSCLVATEVGSRGLDIPHVQMVINFDVPLSSK 356
Query: 300 DYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFP--AEEEEVLLLLERV 357
+YIHRVGRTARAGRTG A+++V QY++E Y +IE +G+KL E E+V+ L E+V
Sbjct: 357 EYIHRVGRTARAGRTGRALTIVTQYDVEAYQRIEHALGQKLDELTELTATEKVMPLHEKV 416
Query: 358 TEAKRISQMTIKDSGN--------KRRRKGGDE 382
EA R +++ +++ + K++R G +
Sbjct: 417 LEALRSAELEAREADDAALVQKAAKKKRGAGSK 449
>gi|237845351|ref|XP_002371973.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|61676032|gb|AAX51681.1| DEAD box RNA helicase [Toxoplasma gondii]
gi|211969637|gb|EEB04833.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
Length = 479
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/406 (48%), Positives = 270/406 (66%), Gaps = 23/406 (5%)
Query: 2 LLWFCDAGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQ 61
+L + G+D+I LA+TGSGKT AF LPILQ LL+ QR F+A +L+PTREL +Q
Sbjct: 81 VLPYALQGRDIIALAETGSGKTAAFGLPILQRLLQ--RTQR----FYALILAPTRELCLQ 134
Query: 62 ISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGT 121
IS+Q A+G + + LVGG+D Q +AL K+PH+VV +PGR++DHL TKGFSL +
Sbjct: 135 ISQQILAMGGTLGVTVVTLVGGLDHNTQAIALAKKPHVVVGSPGRVVDHLQQTKGFSLKS 194
Query: 122 LKYLVLDEADRLLNDDFEKSLDEILNVI--PRMRQTYLFSATMTKKVKKLQRACLKNPVK 179
+K LVLDEADRLL+ DF+ +L +L + P RQT LFSATMT KV KLQ+A LK PVK
Sbjct: 195 VKVLVLDEADRLLSLDFDAALQVLLEHVGSPAERQTMLFSATMTTKVSKLQKASLKKPVK 254
Query: 180 IEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRN 239
+E SKY L+Q + VP K K +L L +S SS +VFT TC R AL LR+
Sbjct: 255 LEVNSKYDVASHLQQHFLLVPFKLKHTHLAAALLHLSPSSVIVFTNTCANARKTALFLRH 314
Query: 240 LGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSK 299
LG +++ + G M+Q +R+GAL KF+A E + L+ T+V SRGLDIP V MVIN+D+P +SK
Sbjct: 315 LGFQSVCLHGKMTQPQRIGALTKFRAAETSCLVATEVGSRGLDIPHVQMVINFDVPLSSK 374
Query: 300 DYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFP--AEEEEVLLLLERV 357
+YIHRVGRTARAGRTG A+++V QY++E Y +IE +G+KL E E+V+ L E+V
Sbjct: 375 EYIHRVGRTARAGRTGRALTIVTQYDVEAYQRIEHALGQKLEELTELTATEKVMPLHEKV 434
Query: 358 TEAKRISQMTIKDS--------GNKRRRKGGDEDDDIGRQFGINKK 395
EA R +++ +++ K++R G++ R G KK
Sbjct: 435 LEALRSAELEAREADEAALVQKAAKKKRGAGNK-----RSSGAGKK 475
>gi|221502154|gb|EEE27898.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 479
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/406 (48%), Positives = 270/406 (66%), Gaps = 23/406 (5%)
Query: 2 LLWFCDAGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQ 61
+L + G+D+I LA+TGSGKT AF LPILQ LL+ QR F+A +L+PTREL +Q
Sbjct: 81 VLPYALQGRDIIALAETGSGKTAAFGLPILQRLLQ--RTQR----FYALILAPTRELCLQ 134
Query: 62 ISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGT 121
IS+Q A+G + + LVGG+D Q +AL K+PH+VV +PGR++DHL TKGFSL +
Sbjct: 135 ISQQILAMGGTLGVTVVTLVGGLDHNTQAIALAKKPHVVVGSPGRVVDHLQQTKGFSLKS 194
Query: 122 LKYLVLDEADRLLNDDFEKSLDEILNVI--PRMRQTYLFSATMTKKVKKLQRACLKNPVK 179
+K LVLDEADRLL+ DF+ +L +L + P RQT LFSATMT KV KLQ+A LK PVK
Sbjct: 195 VKVLVLDEADRLLSLDFDAALQVLLEHVGSPAERQTMLFSATMTTKVSKLQKASLKKPVK 254
Query: 180 IEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRN 239
+E SKY L+Q + VP K K +L L +S SS +VFT TC R AL LR+
Sbjct: 255 LEVNSKYDVASHLQQHFLLVPFKLKHTHLAAALLHLSPSSVIVFTNTCANARKTALFLRH 314
Query: 240 LGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSK 299
LG +++ + G M+Q +R+GAL KF+A E + L+ T+V SRGLDIP V MVIN+D+P +SK
Sbjct: 315 LGFQSVCLHGKMTQPQRIGALTKFRAAETSCLVATEVGSRGLDIPHVQMVINFDVPLSSK 374
Query: 300 DYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFP--AEEEEVLLLLERV 357
+YIHRVGRTARAGRTG A+++V QY++E Y +IE +G+KL E E+V+ L E+V
Sbjct: 375 EYIHRVGRTARAGRTGRALTIVTQYDVEAYQRIEHALGQKLEELTELTATEKVMPLHEKV 434
Query: 358 TEAKRISQMTIKDS--------GNKRRRKGGDEDDDIGRQFGINKK 395
EA R +++ +++ K++R G++ R G KK
Sbjct: 435 LEALRSAELEAREADEAALVQKAAKKKRGAGNK-----RSSGAGKK 475
>gi|207344698|gb|EDZ71756.1| YHR065Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 496
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/331 (56%), Positives = 243/331 (73%), Gaps = 7/331 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLAQTGSGKT AFA+PIL L E ++AC+L+PTRELA QI E F++
Sbjct: 160 GHDIIGLAQTGSGKTAAFAIPILNRLWHDQE------PYYACILAPTRELAQQIKETFDS 213
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R +VGG++MM Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+D
Sbjct: 214 LGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMD 273
Query: 129 EADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL +IP + R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 274 EADRLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQ 333
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL Q VP K+ YL+Y+L E + ++FTRT L+ + L A +
Sbjct: 334 TVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATAL 393
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++Q++R+GAL+ FKAG+ +IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGR
Sbjct: 394 HGDLNQNQRMGALDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGR 453
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGK 338
TARAGR+G +ISLV+QY+LE L+IE+++GK
Sbjct: 454 TARAGRSGKSISLVSQYDLELILRIEEVLGK 484
>gi|124801418|ref|XP_001349688.1| DEAD/DEAH box helicase, putative [Plasmodium falciparum 3D7]
gi|3845295|gb|AAC71961.1| DEAD/DEAH box helicase, putative [Plasmodium falciparum 3D7]
gi|156072124|gb|ABU45413.1| DEAD-box helicase 2 [Plasmodium falciparum]
Length = 562
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 260/363 (71%), Gaps = 8/363 (2%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
KD+IGL++TGSGKT F +PILQ L + +F+A V+SPTREL IQIS+ F+AL
Sbjct: 194 KDIIGLSETGSGKTACFIIPILQDL------KVNKQSFYALVISPTRELCIQISQNFQAL 247
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
G + + + GGVD++ Q+L L K+P+++V+TPGR++DHL NTKGF+L LKYLV DE
Sbjct: 248 GMNLLINICTIYGGVDIVTQSLNLAKKPNVIVSTPGRILDHLNNTKGFNLKNLKYLVFDE 307
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
AD+LL+ DFE S++++L ++P R T+LFSATMTK V KL++ACLKNPVK+E ++KYSTV
Sbjct: 308 ADKLLSQDFESSINKLLLILPPNRITFLFSATMTKNVAKLKKACLKNPVKVEVSNKYSTV 367
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
TL + Y F+P KYK YL + + ++FT TC + L RNLG ++I + G
Sbjct: 368 STLIETYIFLPLKYKYTYLSSLCFHYQTRNIIIFTNTCATAQKLNFFCRNLGLKSICLHG 427
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
++Q++RL +LN FK + NILI T V +RGLD+ + +VIN+DI + K+YIHRVGRTA
Sbjct: 428 KLTQNQRLSSLNSFKVNKYNILISTQVGARGLDLQDIKIVINFDICS-CKEYIHRVGRTA 486
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFP-AEEEEVLLLLERVTEAKRISQMTI 368
RAGR+G +I+ V QY++E +L IEK + KK+ +F +E +VLL E+ EA R+S++ +
Sbjct: 487 RAGRSGKSITFVTQYDVENFLAIEKQLNKKIDKFTDLDENDVLLYHEQTIEALRLSEIEM 546
Query: 369 KDS 371
K++
Sbjct: 547 KEN 549
>gi|399217362|emb|CCF74249.1| unnamed protein product [Babesia microti strain RI]
Length = 394
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/367 (50%), Positives = 250/367 (68%), Gaps = 7/367 (1%)
Query: 13 IGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSG 72
I A GSGKT AF LP+LQ+LLE T F L+PTREL QISEQF+ALG+
Sbjct: 34 IPPALEGSGKTAAFVLPVLQSLLE------TPSRLFCVALAPTRELCAQISEQFKALGAN 87
Query: 73 ISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADR 132
I+L A ++GG+DM Q +AL KRPH++VA+PGRL DH+ NTKGF L + K+L+LDEADR
Sbjct: 88 IALEVATILGGLDMNSQAMALSKRPHVIVASPGRLSDHIENTKGFFLKSSKFLILDEADR 147
Query: 133 LLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTL 192
+L+ DF+ +L+ I+ +P RQT+LFSATMT KV KLQ+A LKNPV+ E KY TV L
Sbjct: 148 ILSMDFDDALNNIIKAMPEERQTFLFSATMTSKVSKLQKASLKNPVRYEIGGKYDTVSGL 207
Query: 193 KQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMS 252
+Q + P KYK + ++ + ++ T+VF TC R L+ L NL + + G MS
Sbjct: 208 EQNFYLCPFKYKWTVITLLVEKFTSCVTIVFCNTCSTARKLSFYLDNLTHKTTCLHGKMS 267
Query: 253 QSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAG 312
Q RL ALN FKAG NIL+ T+V SRGLDIPSVD+V+N+D+P + KDYIHRVGRTARAG
Sbjct: 268 QPLRLSALNNFKAGSSNILVTTEVGSRGLDIPSVDLVVNFDVPQSGKDYIHRVGRTARAG 327
Query: 313 RTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA-EEEEVLLLLERVTEAKRISQMTIKDS 371
R+G AI+LV QY++E + ++E +G KL F E +++ E ++AKR ++ T +S
Sbjct: 328 RSGQAITLVTQYDVEAFQRVEFALGIKLKPFDEFSEAQIMSKHELCSQAKRKAESTAAES 387
Query: 372 GNKRRRK 378
K R+K
Sbjct: 388 PLKHRKK 394
>gi|170099199|ref|XP_001880818.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644343|gb|EDR08593.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 449
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/375 (50%), Positives = 263/375 (70%), Gaps = 13/375 (3%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
K +IG+A TGSGKT AFA+PIL L + + +FACVLSPTRELA QIS QFEAL
Sbjct: 50 KLVIGIAPTGSGKTLAFAIPILHRLWDNPQ------GYFACVLSPTRELAYQISAQFEAL 103
Query: 70 GSGISLRCAVLVGGVD-MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G+ + +R V+VGG D +QQ + L ++PHI+VATPGRL DHL + L VLD
Sbjct: 104 GAAMGVRSVVIVGGDDDRVQQAVQLAQKPHIIVATPGRLHDHLNFHTTQPIIHLGLQVLD 163
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAA-SKYS 187
EADRLL+ DF++ + EI+ IP+ R TYLFSATMT V KLQRA L +PV+++A+ +Y+
Sbjct: 164 EADRLLDLDFQREITEIMQSIPKERCTYLFSATMTANVSKLQRASLSDPVRVDASLFRYT 223
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y P K+ LVY++ ++ + +VF RT + L+++LR+LG A+P+
Sbjct: 224 TVSTLLQHYLLCPLVEKEVTLVYLINSLAQNLIIVFVRTVADAKCLSIILRSLGFEAVPL 283
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++QS+RLG +FK+G+ IL+ TDVASRGLD+P+VD+VINYD+PT+SKDYIHRVGR
Sbjct: 284 HGELTQSQRLGVFTRFKSGKSRILVATDVASRGLDVPNVDVVINYDVPTHSKDYIHRVGR 343
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAGR G +I +V QY+ E L++EK++ +KL +P + +E+ LL ERV EA R+++
Sbjct: 344 TARAGRAGKSILMVTQYDAELMLRLEKVLNRKLDLYPTDLQEIALLKERVVEAGRLARNQ 403
Query: 368 IKDS-----GNKRRR 377
+ + G K+RR
Sbjct: 404 LNEESKARGGGKKRR 418
>gi|221052953|ref|XP_002257851.1| RNA helicase [Plasmodium knowlesi strain H]
gi|193807683|emb|CAQ38387.1| RNA helicase, putative [Plasmodium knowlesi strain H]
Length = 546
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/369 (48%), Positives = 263/369 (71%), Gaps = 8/369 (2%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IGL++TGSGKT F +PILQ L ++ +FFA V+SPTREL IQI++ F+AL
Sbjct: 177 RDIIGLSETGSGKTACFIIPILQEL------RQKRQSFFALVISPTRELCIQIAQHFQAL 230
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GS + + + GGVD++ Q+L L K+P+I+V+TPGR++DHL NTKGF+L LKYLV DE
Sbjct: 231 GSNLLVNICTIFGGVDIVTQSLNLAKKPNIIVSTPGRILDHLNNTKGFNLKNLKYLVFDE 290
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
AD+LL+ DFE S++++L ++P+ R T+LFSATMTK V KL++A LKNP+KIE ++KYST
Sbjct: 291 ADKLLSLDFEASINKLLLILPQKRTTFLFSATMTKSVAKLKKASLKNPIKIEVSNKYSTA 350
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
TL + Y F+P KYK YL + S+ ++F TC + + RNLG ++I + G
Sbjct: 351 STLIENYIFIPLKYKYTYLCSLCFHFSSRCIIIFANTCATAQKINFFCRNLGLKSICLHG 410
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
++Q++RL +LN FK+ NILI T V +RGLD+ + +VIN+D+ + K+YIHRVGRTA
Sbjct: 411 KLTQNQRLSSLNSFKSKRYNILISTQVGARGLDLKDIKIVINFDLCS-CKEYIHRVGRTA 469
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA-EEEEVLLLLERVTEAKRISQMTI 368
RAGRTG +I+ V QY++E +L IEK++ KK+ +F +E +VLL E+ EA R++ +
Sbjct: 470 RAGRTGKSITFVTQYDVENFLAIEKMLNKKIDKFNELDENDVLLYHEQTVEALRLADTEM 529
Query: 369 KDSGNKRRR 377
K++ + RR
Sbjct: 530 KENQDLYRR 538
>gi|156093649|ref|XP_001612863.1| DEAD/DEAH box helicase [Plasmodium vivax Sal-1]
gi|148801737|gb|EDL43136.1| DEAD/DEAH box helicase, putative [Plasmodium vivax]
Length = 539
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 182/377 (48%), Positives = 264/377 (70%), Gaps = 8/377 (2%)
Query: 2 LLWFCDAGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQ 61
+L F +D+IGL++TGSGKT F +PILQ L E + +FFA V+SPTREL IQ
Sbjct: 162 MLPFAFQKRDIIGLSETGSGKTACFIIPILQELREKRQ------SFFALVISPTRELCIQ 215
Query: 62 ISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGT 121
I++ F+ALGS + + + GGVD++ Q+L L K+P+I+V+TPGR++DHL NTKGF+L
Sbjct: 216 IAQHFQALGSNLLINICTIFGGVDIVTQSLNLAKKPNIIVSTPGRILDHLNNTKGFNLKN 275
Query: 122 LKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE 181
LKYLV DEAD+LL+ DFE S++++L ++P R T+LFSATMTK V KL++A LKNP+ +E
Sbjct: 276 LKYLVFDEADKLLSLDFEASINKLLLILPEKRITFLFSATMTKSVAKLKKASLKNPITVE 335
Query: 182 AASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLG 241
+SKYST TL + Y F+P KYK YL + S+ S ++F TC + + RNLG
Sbjct: 336 VSSKYSTASTLIENYIFIPLKYKYTYLCSLCFHFSSRSIIIFANTCATAQKINFFCRNLG 395
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
++I + G ++Q++RL +LN FK+ NILI T V +RGLD+ + +VIN+D+ + K+Y
Sbjct: 396 LKSICLHGKLTQNQRLSSLNSFKSKRYNILISTQVGARGLDLKDIRIVINFDL-CSCKEY 454
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA-EEEEVLLLLERVTEA 360
IHRVGRTARAGRTG +I+ V QY++E +L IEK++ KK+ +F +E + LL E+ EA
Sbjct: 455 IHRVGRTARAGRTGKSITFVTQYDVESFLAIEKMLNKKIDKFSELDENDALLYHEQTVEA 514
Query: 361 KRISQMTIKDSGNKRRR 377
R++ +K++ + RR
Sbjct: 515 LRLADTEMKENQDLYRR 531
>gi|426197762|gb|EKV47689.1| hypothetical protein AGABI2DRAFT_185614 [Agaricus bisporus var.
bisporus H97]
Length = 433
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 193/376 (51%), Positives = 265/376 (70%), Gaps = 18/376 (4%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+G+D+IG+A TGSGKT AFALPIL L + N + A++ +L QFE
Sbjct: 40 SGRDIIGIAPTGSGKTIAFALPILHRLWD---NPQPNFAWYFLLLG----------TQFE 86
Query: 68 ALGSGISLRCAVLVGGV-DMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLV 126
ALG+ + +R V+VGG D +QQ + L K+PHI+VATPGRL DHL +TKGFSL LK+LV
Sbjct: 87 ALGATMGVRSVVIVGGEEDRVQQAVRLAKKPHIIVATPGRLHDHLNSTKGFSLRQLKHLV 146
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-K 185
LDEADRLL+ +F+ + EIL IPR R TYLFSATMT V KLQRA L +PV+++ +S K
Sbjct: 147 LDEADRLLDLEFQLQITEILRAIPRERSTYLFSATMTANVTKLQRASLTDPVRVDVSSFK 206
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
Y TV TL Q Y P K+ LVY++ ++ ++ +VF RT + L+++LR L +A+
Sbjct: 207 YKTVSTLLQYYVLCPLVNKEVMLVYLINSMAQNTIIVFVRTVADAKRLSIVLRTLEFQAV 266
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
P+ G +SQS+RLGA N+FK+G+ NIL+ TD+ASRGLD+ +VD+VINYD PT+SKDY+HRV
Sbjct: 267 PLHGELSQSQRLGAFNRFKSGKSNILVATDLASRGLDVANVDVVINYDTPTSSKDYVHRV 326
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
GRTARAGR G +I +V+QY+ E L++E + +KL +P E EE+ LL ERV E R+++
Sbjct: 327 GRTARAGRAGKSILMVSQYDAEVMLRLEMALERKLELYPTEAEEIALLKERVYEVGRVAR 386
Query: 366 MTIKD---SGNKRRRK 378
IK+ S N+RR++
Sbjct: 387 NQIKEDDMSQNERRKR 402
>gi|320168199|gb|EFW45098.1| DEAD box polypeptide 49 [Capsaspora owczarzaki ATCC 30864]
Length = 611
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 193/383 (50%), Positives = 246/383 (64%), Gaps = 7/383 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+++IG A+TGSGKT AFALPIL L + FA VL+PTRELA QI+EQF
Sbjct: 214 AGRNVIGCAKTGSGKTAAFALPILHRLSDDPYGP------FAVVLTPTRELAFQIAEQFR 267
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
ALG GI+LR AV+VGGVDMMQQ+L L KRPH+++ATPGRL DHL + SL ++LVL
Sbjct: 268 ALGKGINLREAVVVGGVDMMQQSLVLAKRPHVIIATPGRLADHLNSNSQLSLARARFLVL 327
Query: 128 DEADRLLNDDFEKSLDEILNVIPR-MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
DEADRLL + F L+ IL RQT LFSAT+TK + L+ + N V E S
Sbjct: 328 DEADRLLEEGFSPDLNRILAAASNPQRQTLLFSATITKNIANLESMSMSNVVHYETKSSV 387
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
+TV TL Q++ PAK KDCYL Y+L + S +VFT +C + M++ LG R +
Sbjct: 388 ATVTTLDQRFVITPAKVKDCYLSYLLGQHEDKSIIVFTSSCRNCETITRMIKALGFRCVA 447
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
+ MSQS RLG+L KFK+ NILI TDVASRGLDIP+V +VIN D+P S DY+HRVG
Sbjct: 448 LHSEMSQSMRLGSLAKFKSSIVNILIATDVASRGLDIPTVKLVINNDVPRTSTDYVHRVG 507
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQM 366
RTARAGR G+A++ V QY++E IE I KL +E+ L+ L VT AKR + M
Sbjct: 508 RTARAGRGGMAVTFVTQYDIELIQHIESKIKVKLSALTMDEDAALVNLNDVTTAKRTAIM 567
Query: 367 TIKDSGNKRRRKGGDEDDDIGRQ 389
+ + RR+ E D+ R
Sbjct: 568 EMAEENFGERRRRNLEKQDMHRN 590
>gi|390371036|dbj|GAB64917.1| DEAD/DEAH box helicase [Plasmodium cynomolgi strain B]
Length = 525
Score = 366 bits (940), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 182/377 (48%), Positives = 264/377 (70%), Gaps = 15/377 (3%)
Query: 2 LLWFCDAGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQ 61
+L + +D+IGL++TGSGKT F +PILQ L E + +FFA V+SPTREL IQ
Sbjct: 155 MLPYAFQKRDIIGLSETGSGKTACFIIPILQELREKRQ------SFFALVISPTRELCIQ 208
Query: 62 ISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGT 121
I++ F+ALGS + + + GGVD++ Q+L L KRP+I+V+TPGR++DHL NTKGF+L
Sbjct: 209 IAQHFQALGSNLLVNICTIFGGVDIVTQSLNLAKRPNIIVSTPGRILDHLNNTKGFNLKN 268
Query: 122 LKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE 181
LKYLV DEAD+LL+ DFE S++++L ++P R T+LFSATMTK V KL++A LKNP+K+E
Sbjct: 269 LKYLVFDEADKLLSLDFEASINKLLLILPEKRITFLFSATMTKSVAKLKKASLKNPIKVE 328
Query: 182 AASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLG 241
++KYST TL + Y F+P KYK YL + S ++F TC + + RNLG
Sbjct: 329 VSNKYSTASTLIENYLFIPLKYKYTYLCSL-------SIIIFANTCATAQKINFFCRNLG 381
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
++I + G ++Q++RL +LN FK+ NILI T V +RGLD+ + +VIN+D+ + K+Y
Sbjct: 382 LKSICLHGKLTQNQRLSSLNSFKSNRYNILISTQVGARGLDLKDIKIVINFDL-CSCKEY 440
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA-EEEEVLLLLERVTEA 360
IHRVGRTARAGRTG +I+ V QY++E +L IEK++ KK+ +F +E +VLL E+ EA
Sbjct: 441 IHRVGRTARAGRTGKSITFVTQYDVENFLSIEKMLNKKIDKFSEFDENDVLLYHEQTVEA 500
Query: 361 KRISQMTIKDSGNKRRR 377
R++ +K++ + RR
Sbjct: 501 LRLADTEMKENQDLYRR 517
>gi|71031306|ref|XP_765295.1| ATP-dependent RNA helicase [Theileria parva strain Muguga]
gi|68352251|gb|EAN33012.1| ATP-dependent RNA helicase, putative [Theileria parva]
Length = 470
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 184/377 (48%), Positives = 260/377 (68%), Gaps = 20/377 (5%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+GKD+IGLA+TGSGKT AF +PILQ LLE + QR F+ +L+PTREL++QI EQ
Sbjct: 77 SGKDIIGLAETGSGKTAAFTIPILQKLLE--KPQR----LFSLILAPTRELSLQIKEQLI 130
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
+LGS I L +++GG+DM+ Q L L K+PHI+V +PGR+ DHL NTKGFSL T+KYLVL
Sbjct: 131 SLGSEIGLDVCLILGGLDMVSQALQLSKKPHIIVGSPGRIADHLQNTKGFSLETIKYLVL 190
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEAD+LL+ DF+ SL++I+ +P+ + TYL+SATMT K+ KLQ+ L P++I +KY
Sbjct: 191 DEADKLLSTDFDDSLNKIITSLPKDKVTYLYSATMTSKITKLQKVTLMKPIQINVNTKYH 250
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
T + L Q+Y +P K+K YL IL + S S+ MVF TC ++ + L L+NL +++ +
Sbjct: 251 TSEHLIQKYLLIPLKFKYTYLACILWKYSTSTIMVFCNTCLTSQKVTLFLQNLSFKSVCL 310
Query: 248 SGHMSQSKRLGALNKFKAGEC-------------NILICTDVASRGLDIPSVDMVINYDI 294
G +SQ +RL +LN FK G+ NIL+ TDV SRGLDIP VD+VIN+D+
Sbjct: 311 HGKLSQIQRLNSLNSFKTGKLQPIPQPHIISGLFNILVVTDVGSRGLDIPFVDLVINFDV 370
Query: 295 PTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFP-AEEEEVLLL 353
P SKDYIHRVGRTARAG++G++++L+ QY++E + + E + KKL E+ EEEV
Sbjct: 371 PNTSKDYIHRVGRTARAGKSGISLTLITQYDIESFQRTEYALNKKLEEYKDISEEEVYNK 430
Query: 354 LERVTEAKRISQMTIKD 370
+ + R ++M K+
Sbjct: 431 YDECCNSLRNAEMDYKN 447
>gi|168046775|ref|XP_001775848.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672855|gb|EDQ59387.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 192/380 (50%), Positives = 253/380 (66%), Gaps = 11/380 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKD+ GLAQTGSGKT AFALPILQ L AEN V FA VL+PTRELA QIS+QF+
Sbjct: 80 AGKDVFGLAQTGSGKTAAFALPILQKL---AENPYGV---FALVLTPTRELAFQISDQFK 133
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYL 125
ALGS ++LR V+VGG+DM Q AL +RPHIV+ATPGRL DH N G KYL
Sbjct: 134 ALGSEVNLRSTVVVGGMDMTTQAKALMQRPHIVIATPGRLRDHFMNDPGIPDVFAKAKYL 193
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADRL++ FE L + +P RQT LFSATMT +K L L +
Sbjct: 194 VLDEADRLMDVGFESELRSVFETMPSNRQTLLFSATMTSNLKALHDLSLDKAFFYQQYEG 253
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT---EVSASSTMVFTRTCDATRLLALMLRNLGQ 242
+ TV+ L+QQY PA KD YL++I++ E S ++F +C LL+LM+ L
Sbjct: 254 FKTVEALQQQYILTPANVKDVYLMHIMSTLEERKIRSVIIFASSCRTCHLLSLMMSELEV 313
Query: 243 RAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYI 302
+ +Q +RL +L++FK+G+ +ILI TDVASRGLDIP+VD+VINYDIP ++DY+
Sbjct: 314 DTTALHSMKTQQQRLASLSRFKSGQVSILIATDVASRGLDIPTVDLVINYDIPRFTRDYV 373
Query: 303 HRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
HRVGRTARAGR G A+SL+ QY+++ IE+L+GKKL E+ +E++VL + +V +AKR
Sbjct: 374 HRVGRTARAGRGGSAVSLITQYDVQLVQDIEELLGKKLEEYELDEDKVLKSITKVYKAKR 433
Query: 363 ISQMTIKDSGNKRRRKGGDE 382
++ + I DSG + + K E
Sbjct: 434 VAMLKIVDSGFEDKVKTRKE 453
>gi|156083174|ref|XP_001609071.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis T2Bo]
gi|154796321|gb|EDO05503.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis]
Length = 454
Score = 364 bits (934), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 188/391 (48%), Positives = 255/391 (65%), Gaps = 28/391 (7%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA TGSGKTGAF +P+L LLE V + VL+P+REL QI+EQF A
Sbjct: 69 GRDVIGLAVTGSGKTGAFTIPVLHHLLE------DVQRIYCVVLAPSRELCEQIAEQFRA 122
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L S I+L+ V++GGVDM+ Q AL KRPH++VA+PGRL DH+ NTKGFSL T+K LV+D
Sbjct: 123 LSSSIALQVCVIIGGVDMVHQASALAKRPHVIVASPGRLADHVENTKGFSLSTVKKLVID 182
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF++ LD+I++ +P RQT+LFSATMTKK+ KLQ+ LK+P+ ++ KYST
Sbjct: 183 EADRLLSQDFDEELDKIIHAMPTERQTFLFSATMTKKLSKLQKMALKDPISVQVDDKYST 242
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI--- 245
+ L Q++ VP KYK YL +L + + +VF +TCD + A L+ L I
Sbjct: 243 AENLDQRFLLVPQKYKYTYLAALLWYYATRTAIVFCKTCDGAQRCAAYLKGLKFTTICKV 302
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G M+Q+ R AL FK G NIL+ T+V RGLD+P V++VIN+DIP SKDYIHRV
Sbjct: 303 CLHGKMTQADRSRALQIFKTGSVNILVATEVGGRGLDLPMVELVINFDIPECSKDYIHRV 362
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLE---------- 355
GRTARAGR+G+A+++V QY++E + +IE + KKL EF +E+ L
Sbjct: 363 GRTARAGRSGLALTVVTQYDVELFQRIELALNKKLEEFTDLDEDTALAKHALCAESLRRV 422
Query: 356 ---------RVTEAKRISQMTIKDSGNKRRR 377
R KR+S+ K KR+R
Sbjct: 423 QSEKLNHKGRTNTNKRVSKFQAKYEAAKRKR 453
>gi|320587284|gb|EFW99764.1| ATP-dependent RNA helicase [Grosmannia clavigera kw1407]
Length = 481
Score = 363 bits (933), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 194/393 (49%), Positives = 269/393 (68%), Gaps = 26/393 (6%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IG A+TGSGKT AFALP+LQALL+ R P F VLSPTRELA+QI + FE+
Sbjct: 108 RDIIGTAETGSGKTIAFALPMLQALLD-----RPRP-LFGLVLSPTRELAVQIGQTFESF 161
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
+ ISLRCAV+VGG+DM+ Q++AL K+PH+V TKGFSL L+YLV+DE
Sbjct: 162 AA-ISLRCAVVVGGMDMVSQSIALAKKPHVV-------------TKGFSLKHLQYLVIDE 207
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYST 188
ADRLL+ DF L++IL +PR R+T LFSATM+ +V+ LQRA L++PV++ A+S + T
Sbjct: 208 ADRLLDMDFGPILEKILRHLPRERRTMLFSATMSSQVESLQRASLRDPVRVNVASSAHQT 267
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TLKQ P KD LVY++ E S MVFTRT T+ LA++LR LG A+P+
Sbjct: 268 VSTLKQSVIVTPTTRKDVCLVYLVNEFYGQSIMVFTRTIYETQRLAILLRALGFGAVPLH 327
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
+SQS+RL ALNK K+G +LI TDVA+RGLDIP + +VINYD+P +SK Y+HRVGRT
Sbjct: 328 ARLSQSQRLSALNKIKSGSREMLIATDVAARGLDIPHIGIVINYDVPQDSKTYVHRVGRT 387
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIG--KKLPEFPAEEEEVLLLLERVTEAKRISQM 366
ARAG++G A++LV QY+ +L +EK IG +K+ FP + EE+++ RV EA+R + +
Sbjct: 388 ARAGKSGHAVNLVTQYDHTHFLAVEKAIGMERKILPFPIDREELMMFNPRVEEAQRHAHV 447
Query: 367 TIK---DSGNKRRRKGGDEDDDIGRQFGINKKK 396
++ + KR++ G R G+++++
Sbjct: 448 EMRTFIEQNGKRKKTGRSAAGGQRRHDGMDREE 480
>gi|84994532|ref|XP_951988.1| ATP-dependent RNA helicase [Theileria annulata strain Ankara]
gi|65302149|emb|CAI74256.1| ATP-dependent RNA helicase, putative [Theileria annulata]
Length = 455
Score = 363 bits (932), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 180/344 (52%), Positives = 251/344 (72%), Gaps = 9/344 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+GKD+IGLA+TGSGKT AF +PILQ LLE + QR F+ +L+PTREL++QI EQ
Sbjct: 77 SGKDIIGLAETGSGKTAAFTIPILQKLLE--KPQR----LFSLILAPTRELSLQIKEQLI 130
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
+L G+ + C +L GG+DM+ Q L L K+PHI+V +PGR+ DHL NTKGFSL T+KYLVL
Sbjct: 131 SLEIGLDV-CLIL-GGLDMVSQALQLSKKPHIIVGSPGRIADHLQNTKGFSLETIKYLVL 188
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEAD+LL+ DF+ SL++I+ +P+ + TYL+SATMT K+ KLQ+ L P++I +KY
Sbjct: 189 DEADKLLSADFDDSLNKIIISLPKDKVTYLYSATMTSKITKLQKVTLMKPIQINVNTKYH 248
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
T + L Q+Y +P K+K YL IL + S S+ MVF TC ++ + L L+NL +++ +
Sbjct: 249 TNELLIQKYLLIPLKFKYTYLACILWKYSTSTIMVFCNTCLTSQKVTLFLQNLSFKSVCL 308
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQ +RL +LN FK G NIL+ TDV SRG+DIP VD+VIN+D+P SKDYIHRVGR
Sbjct: 309 HGKLSQIQRLNSLNSFKTGLFNILVVTDVGSRGIDIPFVDLVINFDVPNTSKDYIHRVGR 368
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFP-AEEEEV 350
TARAG++G++++L+ QY++E + +IE + KKL E+ EEEV
Sbjct: 369 TARAGKSGISLTLITQYDIEAFQRIEYALNKKLEEYKDISEEEV 412
>gi|405961989|gb|EKC27711.1| Putative ATP-dependent RNA helicase DDX49 [Crassostrea gigas]
gi|405977898|gb|EKC42325.1| Putative ATP-dependent RNA helicase DDX49 [Crassostrea gigas]
Length = 464
Score = 363 bits (932), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 192/391 (49%), Positives = 262/391 (67%), Gaps = 20/391 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD IG A+TGSGKT AFALPILQ L E FA VL+PTRELA QI+EQF
Sbjct: 53 GKDCIGCAKTGSGKTAAFALPILQKLSEDPF------GIFALVLTPTRELAFQIAEQFNV 106
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG I++R V+ GG+DMMQQ + L +PHIV++TPGRL DHL + FSL +K+LVLD
Sbjct: 107 LGKPINVRVTVITGGLDMMQQGIDLQVKPHIVISTPGRLADHLQSCDTFSLRKIKFLVLD 166
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRL+ DDF + L+ I V+P+ RQT LFSATMTK +K LQ + P + S+ +T
Sbjct: 167 EADRLIEDDFGEQLETIFKVLPKKRQTLLFSATMTKHLKDLQDVAMNKPFFWQQKSEVAT 226
Query: 189 VDTLKQQYRFVPAKYKDCYLVYIL---TEVS-ASSTMVFTRTCDATRLLALMLRNLGQRA 244
V+ LKQ Y +PA KD YL+ IL TE++ SS M+FT TC T++L ++ LG
Sbjct: 227 VEGLKQYYVLMPADIKDAYLMQILDKYTEINKKSSIMIFTNTCKYTQILGMVCTQLGLPC 286
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
+ + + Q +RL AL KFK+ + NILI TDVASRGLDIP+VD++IN+++P KDY+HR
Sbjct: 287 VVLHSMIRQKERLAALAKFKSNQINILIATDVASRGLDIPTVDLIINHNVPNKPKDYVHR 346
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRIS 364
VGRTARAGR G AI+LV Q+++ IE+ + K+ E+ +E++V+ +L V AKR +
Sbjct: 347 VGRTARAGRCGTAITLVTQFDVRLVHAIEEFVNSKMEEYDTKEKDVMKILVEVATAKREA 406
Query: 365 QMTI--KDSG-----NKRRR---KGGDEDDD 385
++ + +D G NKR++ +G D D++
Sbjct: 407 EIRLDERDFGVQKEINKRKKLLMEGKDPDEE 437
>gi|156083170|ref|XP_001609069.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis T2Bo]
gi|154796319|gb|EDO05501.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis]
Length = 433
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 179/338 (52%), Positives = 242/338 (71%), Gaps = 9/338 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA TGSGKTGAF +P+L LLE + QR + VL+P+REL QI+EQF A
Sbjct: 80 GRDVIGLAVTGSGKTGAFTIPVLHHLLE--DVQR----IYCVVLAPSRELCEQIAEQFRA 133
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L S I+L+ V++GGVDM+ Q AL KRPH++VA+PGRL DH+ NTKGFSL T+K LV+D
Sbjct: 134 LSSSIALQVCVIIGGVDMVHQASALAKRPHVIVASPGRLADHVENTKGFSLSTVKKLVID 193
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF++ LD+I++ +P RQT+LFSATMTKK+ KLQ+ LK+P+ ++ KYST
Sbjct: 194 EADRLLSQDFDEELDKIIHAMPTERQTFLFSATMTKKLSKLQKMALKDPISVQVDDKYST 253
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI--- 245
+ L Q++ VP KYK YL +L + + +VF +TCD + A L+ L I
Sbjct: 254 AENLDQRFLLVPQKYKYTYLAALLWYYATRTAIVFCKTCDGAQRCAAYLKGLKFTTICKV 313
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G M+Q+ R AL FK G NIL+ T+V RGLD+P V++VIN+DIP SKDYIHRV
Sbjct: 314 CLHGKMTQADRSRALQIFKTGSVNILVATEVGGRGLDLPMVELVINFDIPECSKDYIHRV 373
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEF 343
GRTARAGR+G+A+++V QY++E + +IE + KKL EF
Sbjct: 374 GRTARAGRSGLALTVVTQYDVELFQRIELALNKKLEEF 411
>gi|294868682|ref|XP_002765642.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239865721|gb|EEQ98359.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 367
Score = 360 bits (925), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 169/302 (55%), Positives = 223/302 (73%)
Query: 48 FACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRL 107
+ACVL+PTREL +Q +QFE LG+ I+L A +VGG+DM+ Q ++L K+PHI+VA+PGRL
Sbjct: 31 WACVLAPTRELCVQTGQQFEGLGASINLTTATIVGGLDMVTQAMSLSKKPHIIVASPGRL 90
Query: 108 MDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVK 167
+DHL NTKGF L T+K+LV+DEADRLL DFE +L++I+ PR RQT+LFSATMT KV
Sbjct: 91 VDHLENTKGFHLKTIKFLVMDEADRLLGMDFEDALNKIVQSCPRDRQTFLFSATMTNKVS 150
Query: 168 KLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTC 227
+LQRA L PVK E A K+ L Q Y FVP K+K YL +L S+ M+F TC
Sbjct: 151 QLQRASLTRPVKCEVARKFDVAKGLVQNYMFVPHKHKHAYLAALLAHFKLSTVMIFVDTC 210
Query: 228 DATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVD 287
+ +A LR+LG + + G M+Q+ RLGALN+F+AG +IL+ TDVA+RGLDIPSVD
Sbjct: 211 LNAQRMATTLRHLGHNCVCLHGKMTQTHRLGALNQFRAGTRSILVATDVAARGLDIPSVD 270
Query: 288 MVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEE 347
+VIN+D+P N ++YIHRVGRTARAGRTG +++LV QY++E + +IE GKK+ EFP
Sbjct: 271 VVINFDVPKNPEEYIHRVGRTARAGRTGRSVTLVTQYDIEPFQRIENKQGKKMEEFPEVN 330
Query: 348 EE 349
EE
Sbjct: 331 EE 332
>gi|68071817|ref|XP_677822.1| RNA helicase [Plasmodium berghei strain ANKA]
gi|56498080|emb|CAH95521.1| RNA helicase, putative [Plasmodium berghei]
Length = 499
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 174/363 (47%), Positives = 260/363 (71%), Gaps = 8/363 (2%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IGL++TGSGKT F +PILQ L +N FFA ++SPTREL IQI++ +AL
Sbjct: 131 RDIIGLSETGSGKTACFIIPILQELKLKKQN------FFALIISPTRELCIQIAQNAQAL 184
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GS + + + GGVD++ Q+L L K+P+I+++TPGR++DHL NTKGF+L LKYLV DE
Sbjct: 185 GSNLLINICTIFGGVDIVTQSLNLAKKPNIIISTPGRILDHLNNTKGFNLKNLKYLVFDE 244
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
AD+LL+ DFE S++++L ++P+ R T+LFSATMTK V KL++ LKNP+KIE ++KYSTV
Sbjct: 245 ADKLLSLDFESSINKLLLILPKNRITFLFSATMTKSVAKLKKTSLKNPIKIEVSNKYSTV 304
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
TL + Y F+P KYK YL + + + ++F+ TC + L RNLG ++I + G
Sbjct: 305 KTLIENYIFLPLKYKYTYLCSLCFYYTNKNIIIFSNTCATAQKLNFFCRNLGLKSICLHG 364
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
++Q++RL +LN FK + NILI T V +RGLD+ ++ +VIN+D+ + K+YIHRVGRTA
Sbjct: 365 KLTQNQRLSSLNLFKTNKYNILISTQVGARGLDLQNIKIVINFDLCS-CKEYIHRVGRTA 423
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFP-AEEEEVLLLLERVTEAKRISQMTI 368
RAG+TG +I+ V QY++E +L IEK + KK+ +F +E +VL+ + EA R+S++ +
Sbjct: 424 RAGKTGKSITFVTQYDVETFLTIEKQLNKKIDKFTDIDEHDVLVYHNQALEALRLSEIEM 483
Query: 369 KDS 371
K++
Sbjct: 484 KEN 486
>gi|146104251|ref|XP_001469775.1| putative DEAD box RNA helicase [Leishmania infantum JPCM5]
gi|398024294|ref|XP_003865308.1| DEAD box RNA helicase, putative [Leishmania donovani]
gi|134074145|emb|CAM72887.1| putative DEAD box RNA helicase [Leishmania infantum JPCM5]
gi|322503545|emb|CBZ38631.1| DEAD box RNA helicase, putative [Leishmania donovani]
Length = 527
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 182/368 (49%), Positives = 249/368 (67%), Gaps = 5/368 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIG+AQTGSGKTGA+ALP++ LL QR P V+ PTRELA Q++ QF
Sbjct: 90 GRDLIGVAQTGSGKTGAYALPLVNWLLA----QRKTPYLSVLVMVPTRELAQQVTAQFVL 145
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + LR A LVGG DM++Q L KRPH+VV TPGR+ DHL+NTKGF L L LVLD
Sbjct: 146 LGRSVGLRVATLVGGADMVEQACELSKRPHVVVGTPGRVKDHLSNTKGFKLVKLHALVLD 205
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD++L+ D+EK +D IL +P+ R+T LFSAT++ K+ +LQ+A L++PV ++ K +T
Sbjct: 206 EADKMLDMDYEKEIDAILEQLPQNRRTMLFSATLSTKIDRLQKASLRDPVLLQVHRKNTT 265
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTLKQ Y F P YL LT+ + + ++F R+ + L LR LG RA+P+
Sbjct: 266 VDTLKQYYIFAPFAQMLSYLHLFLTKETGNHILIFCRSAALVHKITLTLRILGHRALPLM 325
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M QS R AL KFK G+ +LICTDVA RGLDIP D+V+N+ +P + +DYIHRVGRT
Sbjct: 326 GRMDQSNRNIALTKFKEGKVRMLICTDVAQRGLDIPHTDVVVNFSLPDHVEDYIHRVGRT 385
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFP-AEEEEVLLLLERVTEAKRISQMT 367
ARAG G A++L++QY++ +IE+ G K E+P E EV L+L+RV +A++ +
Sbjct: 386 ARAGAEGKAVNLISQYDIVLLQKIEQQTGVKCVEYPFLPESEVQLVLQRVEDAEQEAIRE 445
Query: 368 IKDSGNKR 375
I++ +R
Sbjct: 446 IREDAEER 453
>gi|157876834|ref|XP_001686759.1| putative DEAD box RNA helicase [Leishmania major strain Friedlin]
gi|68129834|emb|CAJ09140.1| putative DEAD box RNA helicase [Leishmania major strain Friedlin]
Length = 527
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 181/368 (49%), Positives = 250/368 (67%), Gaps = 5/368 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIG+AQTGSGKTGA+ALP++ LL QR P V+ PTRELA Q++ QF
Sbjct: 90 GRDLIGVAQTGSGKTGAYALPLVNWLLA----QRKTPYLSVLVMVPTRELAQQVTAQFVL 145
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + LR A LVGG DM++Q L KRPH+VV TPGR+ DHL+NTKGF L L LVLD
Sbjct: 146 LGRSVGLRVATLVGGADMVEQACELSKRPHVVVGTPGRVKDHLSNTKGFKLVKLHALVLD 205
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD++L+ ++EK +D IL +P+ R+T LFSAT++ K+ +LQ+A L++PV ++ K +T
Sbjct: 206 EADKMLDMNYEKEIDAILEQLPQNRRTMLFSATLSTKIDRLQKASLRDPVLLQVHRKNTT 265
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTLKQ Y F P YL LT+ + + ++F R+ + L LR LG RA+P+
Sbjct: 266 VDTLKQYYIFAPFAQMLSYLHLFLTKETGNHILIFCRSAALVHKITLTLRILGHRALPLM 325
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M QS R AL KFK G+ +LICTDVA RGLDIP D+V+N+ +P + +DYIHRVGRT
Sbjct: 326 GRMDQSNRNIALTKFKEGKVRMLICTDVAQRGLDIPHTDVVVNFSLPDHVEDYIHRVGRT 385
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA-EEEEVLLLLERVTEAKRISQMT 367
ARAG G A++L++QY++ +IE+ G K E+P+ E EV L+L+RV +A++ +
Sbjct: 386 ARAGAEGKAVNLISQYDIVLLQKIEQQTGVKCVEYPSLPESEVQLVLQRVEDAEQEAIRE 445
Query: 368 IKDSGNKR 375
I++ +R
Sbjct: 446 IREDAEER 453
>gi|401420084|ref|XP_003874531.1| putative DEAD box RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490767|emb|CBZ26031.1| putative DEAD box RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 527
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 181/368 (49%), Positives = 249/368 (67%), Gaps = 5/368 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIG+AQTGSGKTGA+ALP++ LL QR P V+ PTRELA Q++ QF
Sbjct: 90 GRDLIGVAQTGSGKTGAYALPLVNWLL----TQRKTPYLSVLVMVPTRELAQQVTAQFVL 145
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + LR A LVGG DM++Q L KRPH++V TPGR+ DHL+NTKGF L L LVLD
Sbjct: 146 LGRSVGLRVATLVGGADMVEQACELSKRPHVIVGTPGRVKDHLSNTKGFKLVKLHALVLD 205
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD++L+ D+EK +D IL +P+ R+T LFSAT++ K+ +LQ+A L +PV ++ K +T
Sbjct: 206 EADKMLDMDYEKEIDAILEQLPQDRRTMLFSATLSTKIDRLQKASLLDPVLLQVHRKNTT 265
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTLKQ Y F P YL LT+ + + ++F R+ + L LR LG RA+P+
Sbjct: 266 VDTLKQYYIFAPFAQMLSYLHLFLTKETGNHILIFCRSAALVHKITLALRILGHRALPLM 325
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M QS R AL KFK G+ +LICTDVA RGLDIP D+V+N+ +P + +DYIHRVGRT
Sbjct: 326 GRMDQSNRNIALTKFKEGKVRMLICTDVAQRGLDIPHTDVVVNFSLPDHVEDYIHRVGRT 385
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA-EEEEVLLLLERVTEAKRISQMT 367
ARAG G A++L++QY++ +IE+ G K E+P+ E EV L+L+RV +A++ +
Sbjct: 386 ARAGAEGKAVNLISQYDIVLLQKIEQQTGVKCVEYPSLAESEVQLVLQRVEDAEQEAIRE 445
Query: 368 IKDSGNKR 375
I++ +R
Sbjct: 446 IREDAEER 453
>gi|154345774|ref|XP_001568824.1| putative DEAD box RNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066166|emb|CAM43956.1| putative DEAD box RNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 527
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 181/368 (49%), Positives = 249/368 (67%), Gaps = 5/368 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIG+AQTGSGKTGA+ALP++ LL Q P V+ PTRELA Q++ QF
Sbjct: 90 GRDLIGVAQTGSGKTGAYALPLVNWLL----TQPKTPYLSVLVMVPTRELAQQVTAQFLL 145
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + LR A LVGG DM++Q L KRPH++V TPGR+ DHL+NTKGF L L LVLD
Sbjct: 146 LGRSVGLRVATLVGGADMVEQACELSKRPHVIVGTPGRVKDHLSNTKGFKLVKLHALVLD 205
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD++L+ D+EK +D IL +P+ R+T LFSAT++ KV +LQ+A L++PV ++ K +T
Sbjct: 206 EADKMLDMDYEKEIDAILEQLPQDRRTMLFSATLSTKVDRLQKASLRDPVLLQVHRKNTT 265
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTLKQ Y F P YL LT+ + + ++F R+ + L LR LG RA+P+
Sbjct: 266 VDTLKQYYIFAPFAQMLSYLHLFLTKETGNHILIFCRSAALVHRITLALRTLGHRALPLM 325
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M QS R AL KFK G+ +LICTDVA RGLDIP D+V+N+ +P + +DYIHRVGRT
Sbjct: 326 GRMDQSNRNIALTKFKEGKVRMLICTDVAQRGLDIPHTDVVVNFSLPDHVEDYIHRVGRT 385
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA-EEEEVLLLLERVTEAKRISQMT 367
ARAG G A++L++QY++ +IE+ G K E+P+ E EV L+L+RV +A++ +
Sbjct: 386 ARAGAEGKAVNLISQYDIVLLQKIEQQTGVKCVEYPSLPESEVQLVLQRVEDAEQEAIRE 445
Query: 368 IKDSGNKR 375
I++ +R
Sbjct: 446 IREDAGER 453
>gi|167539739|ref|XP_001741236.1| ATP-dependent rRNA helicase RRP3 [Entamoeba dispar SAW760]
gi|165894254|gb|EDR22313.1| ATP-dependent rRNA helicase RRP3, putative [Entamoeba dispar
SAW760]
Length = 406
Score = 357 bits (917), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 178/332 (53%), Positives = 234/332 (70%), Gaps = 7/332 (2%)
Query: 20 SGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGSGI-SLRCA 78
SGKT +F LP++Q LL + E R AF+ ++ PTRELA Q+ E + +G + L
Sbjct: 43 SGKTASFLLPMIQHLLNVKEKNR---AFYCIIIEPTRELAAQVVEVLDEIGKALPGLMSC 99
Query: 79 VLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGF--SLGTLKYLVLDEADRLLND 136
+LVGG+D+M+Q++ L KRPH++V TPGR++ H+ NTKG S+ +K+LV+DEAD+LL
Sbjct: 100 LLVGGMDVMKQSVQLAKRPHVIVGTPGRIVYHIKNTKGVEESIQKVKFLVIDEADKLLEM 159
Query: 137 DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKI-EAASKYSTVDTLKQQ 195
DF +D ++ +P R T LFSATM+ KV+KLQRA L +PVKI E KY TVDTL+Q+
Sbjct: 160 DFANEIDYLIEKLPSQRTTMLFSATMSTKVEKLQRASLTHPVKIKEEEQKYQTVDTLRQE 219
Query: 196 YRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSK 255
Y F+P KY+D YL+ IL E S ++FT C L +MLR LG AIP+ G MSQ K
Sbjct: 220 YCFIPFKYRDGYLLSILKETEGKSIIIFTMKCSGCTKLVMMLRQLGYAAIPLHGKMSQQK 279
Query: 256 RLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTG 315
RL AL KFK+G+ IL+ TDVASRGLDIP+VD+VINYD P KDYIHRVGRTARAG++G
Sbjct: 280 RLIALEKFKSGKRGILVATDVASRGLDIPNVDIVINYDCPLEPKDYIHRVGRTARAGKSG 339
Query: 316 VAISLVNQYELEWYLQIEKLIGKKLPEFPAEE 347
AI+LV QY +E Y +IE +I KKL E+ A +
Sbjct: 340 YAITLVTQYSIELYQRIETMIEKKLNEYKAND 371
>gi|403222338|dbj|BAM40470.1| ATP-dependent RNA helicase [Theileria orientalis strain Shintoku]
Length = 470
Score = 357 bits (915), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 179/362 (49%), Positives = 255/362 (70%), Gaps = 9/362 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKT AF +PILQ LLE + QR F+ +L+PTREL++QI EQ +
Sbjct: 92 GKDIIGLAETGSGKTAAFTIPILQKLLE--KPQR----LFSLILTPTRELSLQIKEQLLS 145
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I L +++GG+DM+ Q L L K+PHI+V +PGR+ DHL NTKGFSL T+K+LVLD
Sbjct: 146 LGSEIGLDVCLILGGLDMVTQALQLSKKPHIIVGSPGRVADHLQNTKGFSLETIKFLVLD 205
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ DF+ SL++I+ +P+ R TYL+SATMT K+ KLQ+ L P+ I +KY T
Sbjct: 206 EADRILSIDFDDSLNKIIQSLPKERITYLYSATMTSKLSKLQKVTLIKPININ--TKYHT 263
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
L Q+Y +P K+K YL +L + S+ M+F TC ++ + + L+NL ++I +
Sbjct: 264 NQLLIQKYLLIPLKFKFTYLACVLWKFPQSTCMIFCNTCLTSQKVTIFLQNLEFKSICLH 323
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G ++Q++RL +LN FK G N+L+ TDV SRGLDIP VD+VIN+D+P SKDYIHRVGRT
Sbjct: 324 GKLTQTQRLNSLNSFKTGLKNVLVVTDVGSRGLDIPLVDLVINFDVPQTSKDYIHRVGRT 383
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEF-PAEEEEVLLLLERVTEAKRISQMT 367
ARAG++G++++ + QY++E + +IE + KKL EF E E+ E + + R ++M
Sbjct: 384 ARAGKSGLSVTFITQYDVESFQRIEYTLDKKLEEFTEVTENEMYDKHEACSNSLRNAEMD 443
Query: 368 IK 369
K
Sbjct: 444 YK 445
>gi|70945861|ref|XP_742705.1| RNA helicase [Plasmodium chabaudi chabaudi]
gi|56521835|emb|CAH78029.1| RNA helicase, putative [Plasmodium chabaudi chabaudi]
Length = 483
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 174/356 (48%), Positives = 254/356 (71%), Gaps = 8/356 (2%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IGL++TGSGKT F +PILQ L + +FFA ++SPTREL IQI++ +AL
Sbjct: 135 RDIIGLSETGSGKTACFIIPILQEL------KYKKQSFFALIISPTRELCIQIAQNAQAL 188
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GS + + + GGVD++ Q+L L K+P+I+++TPGR++DHL NTKGF+L LKYLV DE
Sbjct: 189 GSNLLINICTIFGGVDIVTQSLNLAKKPNIIISTPGRILDHLNNTKGFNLKNLKYLVFDE 248
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
AD+LL+ DFE S++++L ++P R T+LFSATMTK V KL++A LKNP+KIE ++KYSTV
Sbjct: 249 ADKLLSLDFESSINKLLLILPNNRITFLFSATMTKSVAKLKKASLKNPIKIEVSNKYSTV 308
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
TL + Y F+P KYK YL + + + ++FT TC + L RNLG ++I + G
Sbjct: 309 KTLIETYIFLPLKYKYTYLCSLCFYFTNKNIIIFTNTCATAQKLNFFCRNLGLKSICLHG 368
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
++Q++RL +LN FK + NILI T V +RGLD+ ++ +VIN+D+ + K+YIHRVGRTA
Sbjct: 369 KLTQNQRLSSLNLFKTNKYNILISTQVGARGLDLQNIKIVINFDLCS-CKEYIHRVGRTA 427
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFP-AEEEEVLLLLERVTEAKRIS 364
RAG+TG +I+ V QY++E +L IEK + KK+ +F +E +VL+ + EA R+S
Sbjct: 428 RAGKTGKSITFVTQYDVEAFLTIEKQLNKKIDKFTDIDEHDVLVYHTQALEALRLS 483
>gi|82915130|ref|XP_728973.1| DEAD/DEAH box helicase [Plasmodium yoelii yoelii 17XNL]
gi|23485712|gb|EAA20538.1| DEAD/DEAH box helicase, putative [Plasmodium yoelii yoelii]
Length = 517
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 171/363 (47%), Positives = 260/363 (71%), Gaps = 8/363 (2%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IGL++TGSGKT F +PILQ L + +FFA ++SPTREL IQI++ +AL
Sbjct: 146 RDIIGLSETGSGKTACFIIPILQEL------KIKKQSFFALIISPTRELCIQIAQNAQAL 199
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GS + + + GGVD++ Q+L L K+P+I++ TPGR++DHL NTKGF+L LKYL+ DE
Sbjct: 200 GSNLLINICTIFGGVDIVTQSLNLAKKPNIIIGTPGRILDHLNNTKGFNLKNLKYLIFDE 259
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
AD+LL+ DFE S++++L ++P+ R T+LFSATMTK V KL++A LKNP++I+ ++KYSTV
Sbjct: 260 ADKLLSLDFESSINKLLLILPKNRITFLFSATMTKSVSKLKKASLKNPIQIQVSNKYSTV 319
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
TL + Y F+P KYK YL + + + ++F+ TC + L RNLG ++I + G
Sbjct: 320 KTLIETYIFLPLKYKYTYLCSLCFYFTNKNIIIFSNTCATAQKLNFFCRNLGLKSICLHG 379
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
++Q++RL +LN FK + NILI T V +RGLD+ ++ +VIN+D+ + K+YIHRVGRTA
Sbjct: 380 KLTQNQRLSSLNLFKTNKYNILISTQVGARGLDLKNIKIVINFDLCS-CKEYIHRVGRTA 438
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFP-AEEEEVLLLLERVTEAKRISQMTI 368
RAG+TG +I+ V QY++E +L IEK + KK+ +F +E +VL+ + EA R+S++ +
Sbjct: 439 RAGKTGKSITFVTQYDVETFLTIEKQLNKKIDKFTDIDEHDVLMYHNQTLEALRLSELEM 498
Query: 369 KDS 371
K++
Sbjct: 499 KEN 501
>gi|149235261|ref|XP_001523509.1| ATP-dependent rRNA helicase RRP3 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152060561|sp|A5E6W6.1|RRP3_LODEL RecName: Full=ATP-dependent rRNA helicase RRP3
gi|146452918|gb|EDK47174.1| ATP-dependent rRNA helicase RRP3 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 504
Score = 354 bits (908), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 185/374 (49%), Positives = 256/374 (68%), Gaps = 12/374 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G+A+TGSGKT AFA+PILQ L A+ ++A VL+PTRELA QI E F+A
Sbjct: 135 GKDIVGIAETGSGKTAAFAIPILQTLYTAAQ------PYYALVLAPTRELAFQIKETFDA 188
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + LR ++GG+ MM+Q L ++PH+++ATPGRL+DHL +TKGFSL L+YLV+D
Sbjct: 189 LGSSMGLRSVCIIGGMSMMEQARDLMRKPHVIIATPGRLIDHLEHTKGFSLKKLQYLVMD 248
Query: 129 EADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
E DR+++ D+ K++D+IL IP R TYL++ATM+++++K +R+ L +PV++E
Sbjct: 249 EVDRMIDLDYAKAIDQILKQIPSHQRITYLYTATMSREIEKFKRS-LNSPVQVEIVKLEK 307
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
D LKQ KD L+ I+ S ++FTRT TR LML NLG + + +
Sbjct: 308 VPDKLKQTMCLTSPNTKDTRLIQIVNLDSMKRVIIFTRTVVHTRRCCLMLLNLGFKCVEL 367
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G M QS+RLGA+NKFKAG IL+ TDVA+RGLDIP+VD+VINYDIP + YIHRVGR
Sbjct: 368 HGQMPQSRRLGAINKFKAG-TPILVATDVAARGLDIPAVDLVINYDIP-DPTLYIHRVGR 425
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP--EFPAEEEEVLLLLERVTEAKRISQ 365
TARAG+ G AISLV QY+LE YL+IE +G KLP + P +E + L + +K I
Sbjct: 426 TARAGKAGKAISLVTQYDLESYLRIENTLGTKLPKEDLPLDEMQGLQVSVDRALSKAIQM 485
Query: 366 MTIKDSGNKRRRKG 379
+ +++ NK R +G
Sbjct: 486 LRNEENDNKLRHRG 499
>gi|156389591|ref|XP_001635074.1| predicted protein [Nematostella vectensis]
gi|156222164|gb|EDO43011.1| predicted protein [Nematostella vectensis]
Length = 436
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 180/364 (49%), Positives = 245/364 (67%), Gaps = 7/364 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT AFALPILQ L + FA VL+PTRELA QI++QF+
Sbjct: 44 GRDCIGCAKTGSGKTAAFALPILQKLCDDPY------GIFAVVLTPTRELAFQIADQFKV 97
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG I L+ AV+VGG+DMM+Q L+L +PH+V+ATPGRL DH+ +T +L +++LVLD
Sbjct: 98 LGRPIGLKEAVIVGGLDMMKQALSLANKPHVVIATPGRLADHIKSTDTLNLKKIQFLVLD 157
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ F L I + +P RQT LFSAT+T + +LQ+ P E S +T
Sbjct: 158 EADRLLDPSFGDDLKVIFDAVPEKRQTLLFSATLTDTMGELQKMSGSQPFSYEVQSDIAT 217
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSAS-STMVFTRTCDATRLLALMLRNLGQRAIPI 247
V L Q+Y PA +DCYLV++L E + S +VFT TC ++L M LG + +
Sbjct: 218 VAELDQRYLLTPAHVRDCYLVHLLRENDDNQSVIVFTHTCKNCQVLVSMFHKLGLTCVGL 277
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
+SQ +RL AL +FK+G IL+ TDVASRGLDIP V++V+N +IP + KDYIHRVGR
Sbjct: 278 HSLLSQGERLAALARFKSGTIKILVATDVASRGLDIPQVELVVNSNIPADPKDYIHRVGR 337
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAGR G+AIS+V QY+++ +IE+ I KL E+ E+EVL LL+ V A+R +++
Sbjct: 338 TARAGRGGMAISMVTQYDIDRVKKIEEKINTKLTEYTTSEKEVLTLLKAVLVARREAELR 397
Query: 368 IKDS 371
++DS
Sbjct: 398 VRDS 401
>gi|148232160|ref|NP_001084651.1| uncharacterized protein LOC414610 [Xenopus laevis]
gi|46249606|gb|AAH68844.1| MGC81500 protein [Xenopus laevis]
Length = 317
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 171/257 (66%), Positives = 212/257 (82%), Gaps = 6/257 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPILQ LLE QR +A VL+PTRELA QISEQFEA
Sbjct: 56 GRDIIGLAETGSGKTGAFALPILQTLLE--SPQR----LYALVLTPTRELAFQISEQFEA 109
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+GS I ++ AV+VGG+DMM Q+LAL K+PH+V+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 110 IGSSIGVKSAVIVGGIDMMSQSLALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMD 169
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KL+RA LK+PVK +SKY T
Sbjct: 170 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLERAALKDPVKCAVSSKYQT 229
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ +AL+LRNLG AIP+
Sbjct: 230 VEKLQQFYVFIPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRVALLLRNLGFTAIPLH 289
Query: 249 GHMSQSKRLGALNKFKA 265
G MSQ+KRLGALNKFKA
Sbjct: 290 GQMSQNKRLGALNKFKA 306
>gi|281202503|gb|EFA76705.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 1173
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 184/386 (47%), Positives = 250/386 (64%), Gaps = 13/386 (3%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+G+D++ A+TG GKT AFALPIL AL E FA VL+PTRELA+QI EQF
Sbjct: 696 SGRDILASAKTGQGKTAAFALPILSALSE------DPYGIFAVVLTPTRELAVQIGEQFR 749
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
ALGS I++ C V++GG+D +QQ+L L KRPHI+VATPGRL HL N +L ++LVL
Sbjct: 750 ALGSAINVNCCVVIGGIDNVQQSLILDKRPHIIVATPGRLAAHLNNGMKLALQFCRFLVL 809
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L DFE + +I+ +P QT L+SATMT KKL+ +KNP E +KY
Sbjct: 810 DEADRMLGPDFELEVQKIVEHLPPKIQTLLYSATMTNSNKKLESIPIKNPYIFEDNNKYD 869
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV+TL Q Y F+PA+ KDC+LVY+L + +SS +VF C + ML L +++ +
Sbjct: 870 TVETLSQYYVFMPAQAKDCHLVYLLKKHDSSSVIVFINNCRTVEAVKGMLNKLDIKSVSL 929
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
+SQ RL AL +FK+G+ +LI TDVASRGLDIP V MVINY + +SKDYIHRVGR
Sbjct: 930 HSFLSQKDRLNALKQFKSGKIRVLIATDVASRGLDIPDVQMVINYKLSNSSKDYIHRVGR 989
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TAR GR+G AIS V +++E +E IGK+L + E+E V L + A+++ ++
Sbjct: 990 TARFGRSGRAISFVTPHDVELVKNVEAAIGKQLELYTTEDEAVYRHLGEASTARKLVEIY 1049
Query: 368 IKD----SGNKRRRKGGDEDDDIGRQ 389
+ + K RR DE +++ RQ
Sbjct: 1050 LDEIEFGVKEKERR---DERNELTRQ 1072
>gi|407849139|gb|EKG03976.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi]
Length = 511
Score = 350 bits (899), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 180/362 (49%), Positives = 237/362 (65%), Gaps = 7/362 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+AQTGSGKTGA+ LP++ LL Q VP V+ PTRELA Q++ QF
Sbjct: 74 GRDIIGVAQTGSGKTGAYVLPLVNWLL----TQSKVPYLSVLVMVPTRELAQQVTAQFVM 129
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + LR A LVGG DM+ Q L KRPH+VV TPGR+ DHL NTKGF L L LVLD
Sbjct: 130 LGHSVGLRVATLVGGADMVDQACELSKRPHVVVGTPGRIKDHLQNTKGFKLVKLHALVLD 189
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD++L+ D+EK +D IL +P RQT LFSAT+ K+ +LQ+A L +PV +E K +T
Sbjct: 190 EADKMLDMDYEKEIDAILEHLPHSRQTMLFSATLNTKIDRLQKASLNDPVLLEVHRKNTT 249
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTLKQ Y F P YL LT + + +VF R+ + L LR LG +A+P+
Sbjct: 250 VDTLKQYYVFCPFAQMLSYLHLYLTRETGNHILVFCRSAALVHRITLTLRILGHQALPLM 309
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M Q+ R AL KFK G+ IL+CTDVA RGLDI D+V+NY +P +DYIHRVGRT
Sbjct: 310 GRMDQTNRNIALTKFKEGKIRILVCTDVAQRGLDISHTDVVVNYALPDRVEDYIHRVGRT 369
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG G A+++++QY++ +IE G K E+P +E +V +L+RV +A+ Q TI
Sbjct: 370 ARAGAQGKAVNIISQYDILLLQRIEATTGVKCEEWPVQEGDVAAVLQRVEDAE---QETI 426
Query: 369 KD 370
K+
Sbjct: 427 KE 428
>gi|71665094|ref|XP_819521.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma cruzi strain CL
Brener]
gi|70884825|gb|EAN97670.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma cruzi]
Length = 511
Score = 350 bits (898), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 180/362 (49%), Positives = 237/362 (65%), Gaps = 7/362 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+AQTGSGKTGA+ LP++ LL Q VP V+ PTRELA Q++ QF
Sbjct: 74 GRDIIGVAQTGSGKTGAYVLPLVNWLL----TQSKVPYLSVLVMVPTRELAQQVTAQFVM 129
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + LR A LVGG DM+ Q L KRPH+VV TPGR+ DHL NTKGF L L LVLD
Sbjct: 130 LGHSVGLRVATLVGGADMVDQACELSKRPHVVVGTPGRIKDHLQNTKGFQLVKLHALVLD 189
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD++L+ D+EK +D IL +P RQT LFSAT+ K+ +LQ+A L +PV +E K +T
Sbjct: 190 EADKMLDMDYEKEIDAILEHLPHSRQTMLFSATLNTKIDRLQKASLNDPVLLEVHRKNTT 249
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTLKQ Y F P YL LT + + +VF R+ + L LR LG +A+P+
Sbjct: 250 VDTLKQYYVFCPFAQMLPYLHLYLTRETGNHILVFCRSAALVHRITLTLRILGHQALPLM 309
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M Q+ R AL KFK G+ IL+CTDVA RGLDI D+V+NY +P +DYIHRVGRT
Sbjct: 310 GRMDQTNRNIALTKFKEGKVRILVCTDVAQRGLDISHTDVVVNYALPDRVEDYIHRVGRT 369
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG G A+++++QY++ +IE G K E+P +E +V +L+RV +A+ Q TI
Sbjct: 370 ARAGAQGKAVNIISQYDILLLQRIEATTGVKCEEWPVQEGDVAAVLQRVEDAE---QETI 426
Query: 369 KD 370
K+
Sbjct: 427 KE 428
>gi|326430346|gb|EGD75916.1| ATP-dependent RNA helicase RhlE [Salpingoeca sp. ATCC 50818]
Length = 2578
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 181/397 (45%), Positives = 258/397 (64%), Gaps = 14/397 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G+A+TGSGKT AFALP++ +L+ +R F A V++PTRELA QI +F+A
Sbjct: 2191 GKDIVGIAKTGSGKTAAFALPVMHSLINARPRERR---FHALVMAPTRELAQQIEGEFKA 2247
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ I L+ A+LVGG+ + QQ L + PH+++ATPGR++ HL T GF L +K+L+LD
Sbjct: 2248 LGATIGLKTALLVGGLSLQQQQDRLSQNPHVLIATPGRILHHLERTNGFKLNNVKFLILD 2307
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L +FE+ +D++L IP+ R +LFSAT KVK L A L+NPV I+ K T
Sbjct: 2308 EADRMLTPEFEREIDQLLGHIPKRRTNFLFSATSNDKVKHLMHAVLRNPVHIKIKHKVKT 2367
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTE---VSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
VDTL Q F+P ++K+ YLV+ L + SS ++F T AT L LMLR LG RA
Sbjct: 2368 VDTLDQHCVFLPLQFKETYLVWFLQRQGLQADSSVIIFCETKRATMKLVLMLRKLGLRAT 2427
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G+MSQ KR+GAL +FK + N+L+CT+V +RGLDI V++VINYD+P S Y+HRV
Sbjct: 2428 CLHGNMSQEKRIGALARFKTHKDNVLVCTNVGARGLDIQGVELVINYDLPKTSDVYLHRV 2487
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
GRTARAGR+G A++ V QY++ ++ +IE +G LP ++E L + EA R +
Sbjct: 2488 GRTARAGRSGRAVTFVTQYDVPYFKEIEAGVGLDLP-VRKYDKECKELYAEIDEASRYAT 2546
Query: 366 MTIKD-SGNKRRRKGGDEDDDIGRQFGINKKKLSKRK 401
+K+ R ++GG RQ G + K+K
Sbjct: 2547 REMKEIEAETRTKRGGK------RQAGGGNGRFKKKK 2577
>gi|407409724|gb|EKF32444.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi
marinkellei]
Length = 512
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 180/362 (49%), Positives = 237/362 (65%), Gaps = 7/362 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+AQTGSGKTGA+ LP++ LL Q VP V+ PTRELA Q++ QF
Sbjct: 74 GRDIIGVAQTGSGKTGAYVLPLVNWLL----TQSKVPYLSVLVMVPTRELAQQVTAQFVM 129
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + LR A LVGG DM+ Q L KRPH+VV TPGR+ DHL NTKGF L L LVLD
Sbjct: 130 LGHSVGLRVATLVGGADMVDQACELSKRPHVVVGTPGRIKDHLQNTKGFQLVKLHALVLD 189
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD++L+ D+EK +D IL +P RQT LFSAT+ K+ +LQ+A L +PV +E K +T
Sbjct: 190 EADKMLDMDYEKEIDAILEHLPHSRQTMLFSATLNTKIDRLQKASLNDPVLLEVHRKNTT 249
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTLKQ Y F P YL LT + + +VF R+ + L LR LG +A+P+
Sbjct: 250 VDTLKQYYVFCPFAQMLPYLHLYLTRETGNHILVFCRSAALVHRITLTLRILGHQALPLM 309
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M Q+ R AL KFK G+ IL+CTDVA RGLDI D+V+NY +P +DYIHRVGRT
Sbjct: 310 GRMDQTNRNIALTKFKEGKVRILVCTDVAQRGLDISHTDVVVNYALPDRVEDYIHRVGRT 369
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG G A+++++QY++ +IE G K E+P +E +V +L+RV +A+ Q TI
Sbjct: 370 ARAGAQGKAVNIISQYDILLLQRIEATTGVKCEEWPLQEGDVAAVLQRVEDAE---QETI 426
Query: 369 KD 370
K+
Sbjct: 427 KE 428
>gi|440803376|gb|ELR24282.1| DEAD (AspGlu-Ala-Asp) box polypeptide 47 isoform 3, putative,
partial [Acanthamoeba castellanii str. Neff]
Length = 261
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 166/253 (65%), Positives = 202/253 (79%)
Query: 92 ALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPR 151
AL +PHI+ ATPGRL+ HL NTKGFSL +LKYLVLDEADRLLN D+E+ +D+IL +P+
Sbjct: 1 ALCLQPHIICATPGRLLFHLQNTKGFSLKSLKYLVLDEADRLLNMDYEEEIDQILACLPK 60
Query: 152 MRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYI 211
R TYLFSATMT KVKKL+RA L NPVKI +SKYSTVDTL Q Y FVP K+KDCYLVY+
Sbjct: 61 ERHTYLFSATMTSKVKKLERASLANPVKISVSSKYSTVDTLLQNYVFVPEKFKDCYLVYL 120
Query: 212 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 271
L E +S +VF TC+ + +ALMLRNLG A+PI G MSQS+R+G+LN FK G+ NIL
Sbjct: 121 LNEFVGNSIIVFVATCNTAQRVALMLRNLGFEALPIHGKMSQSRRIGSLNTFKTGDRNIL 180
Query: 272 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 331
+ TDVASRGLDIPSVD++INYDIP N KDYIHRVGRTARA R G A+S+V QY++E++ +
Sbjct: 181 LATDVASRGLDIPSVDLIINYDIPLNPKDYIHRVGRTARAQRAGRAVSVVTQYDIEFFQK 240
Query: 332 IEKLIGKKLPEFP 344
IE+L G K + P
Sbjct: 241 IEQLTGLKTGDVP 253
>gi|328874156|gb|EGG22522.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 576
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 177/364 (48%), Positives = 246/364 (67%), Gaps = 8/364 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D++ A+TGSGKT AFA+PIL L +E+ V FA VL+PTRELA+QI EQF+A
Sbjct: 130 GRDILASAKTGSGKTAAFAIPILSLL---SEDPYGV---FAVVLTPTRELAVQIGEQFKA 183
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+GS +++ CAV++GG+D + Q+L L KRPHI+VATPGRL HL+N +L K+LVLD
Sbjct: 184 IGSAMNVNCAVVIGGIDSVAQSLVLDKRPHIIVATPGRLASHLSNGLKIALKFCKFLVLD 243
Query: 129 EADRLLNDDFEKSLDEILNVIPRM--RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
EADR+L +DFE +++I+ +P + RQT L+SATMT +KKLQ +K+P E SKY
Sbjct: 244 EADRILCEDFELEIEKIVEHLPPIENRQTLLYSATMTNNLKKLQLVPMKDPFVFEDNSKY 303
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
TVDTLKQ Y ++PA KDC+LVY+L SS ++F C + ML L + +
Sbjct: 304 DTVDTLKQHYIYMPALAKDCHLVYLLKSFPQSSCIIFVNNCRTVEAVKGMLNKLDIKTVS 363
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
+ + Q RL AL +FK+G +LI TDVASRGLDIP V +VINY + +SKDYIHRVG
Sbjct: 364 LHSFLDQKGRLRALKQFKSGFVKVLIATDVASRGLDIPDVQIVINYKLSNSSKDYIHRVG 423
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQM 366
RTAR GRTG AIS V ++++ +E IGK+L +P E++EV L + A+++ ++
Sbjct: 424 RTARFGRTGKAISFVTPHDVDLVKNVETAIGKQLELYPTEDDEVYRHLNEASTARKMVEI 483
Query: 367 TIKD 370
+ +
Sbjct: 484 YLDE 487
>gi|449667317|ref|XP_002168355.2| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Hydra
magnipapillata]
Length = 429
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 177/397 (44%), Positives = 262/397 (65%), Gaps = 15/397 (3%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+G+D IG A+TGSGKT AFALPI+Q L E FA +L+PTRELAIQI++QF+
Sbjct: 39 SGRDCIGSAKTGSGKTAAFALPIIQKLSEDPY------GIFALILTPTRELAIQIADQFK 92
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
ALG I L AV++GG+DM++Q + L +PH+V+ATPGRL H+T+ FSL +K+LVL
Sbjct: 93 ALGKSIGLNDAVIIGGLDMVKQGMELSNQPHVVIATPGRLASHITSGTKFSLNKIKFLVL 152
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADRLL FE L+ I + I + RQT LFSAT+T + L+ NP E S ++
Sbjct: 153 DEADRLLEKSFENDLEVIFDNIAKKRQTLLFSATITDAINHLKEVA-HNPFCYEVKSDFA 211
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV L Q+Y +P++ KDCYLV++L S S ++FT+TC + ++++ MLR + + +
Sbjct: 212 TVTELDQRYLLIPSQVKDCYLVHLLQNFSEKSVIIFTQTCRSCQVISFMLRKVEFKCAGL 271
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
MSQ +RL +L +F++G IL+ TDVASRGLDIP V +VINY++P + KDY+HRVGR
Sbjct: 272 HSVMSQRERLSSLGRFRSGHVKILVATDVASRGLDIPLVQLVINYNVPASPKDYVHRVGR 331
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAGR G++++L+ Q++++ IE IG K+ EF E++ + LL+ ++ +R ++
Sbjct: 332 TARAGRGGMSLTLLTQFDIDRLKAIETFIGLKMKEFETNEDDAVKLLKPISIIRREVEIR 391
Query: 368 IKDSG------NKRRRKGGDEDDDIGRQFGINKKKLS 398
+ D+ N +R+ G + + F NKKK++
Sbjct: 392 LNDANFGEKKKNNKRKLGLLNSNSKPKLF--NKKKIT 426
>gi|302804021|ref|XP_002983763.1| hypothetical protein SELMODRAFT_268770 [Selaginella moellendorffii]
gi|300148600|gb|EFJ15259.1| hypothetical protein SELMODRAFT_268770 [Selaginella moellendorffii]
Length = 418
Score = 347 bits (890), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 182/369 (49%), Positives = 247/369 (66%), Gaps = 11/369 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G+AQTGSGKT AFALPILQ L EN + FA V++PTRELA QIS+QF+A
Sbjct: 39 GKDVLGMAQTGSGKTAAFALPILQRL---GENPYGI---FALVMTPTRELAFQISDQFKA 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLV 126
LG+G+ LRCAV+VGG+DM Q L +RPH+V+ATPGR+ HL + + K+LV
Sbjct: 93 LGAGVHLRCAVVVGGMDMTTQAQILTERPHVVIATPGRIKAHLGSDPDIAAAFSKTKFLV 152
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
LDEAD LL+ F+ L I + I + RQT LFSATMT ++ L+ +A
Sbjct: 153 LDEADLLLDRGFQDELQTIFDGISKQRQTLLFSATMTGDLQALRDLFGHRAFFYQAYEGL 212
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSAS---STMVFTRTCDATRLLALMLRNLGQR 243
TV++L Q+Y F+P K K+ YL Y+L + S ++F C LL+L+L LG
Sbjct: 213 KTVESLDQRYIFMPGKVKNVYLTYLLENLELGDIRSVIIFVSRCRTCHLLSLILDELGIS 272
Query: 244 AIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIH 303
A+ + +Q +RL ALN+FK+G+ ILI TDVASRGLDIP+VD+V+NYDIP +KDY+H
Sbjct: 273 AVALHSVKTQPQRLAALNQFKSGQATILIATDVASRGLDIPTVDLVVNYDIPRFTKDYVH 332
Query: 304 RVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRI 363
RVGRTARAGR G AISLV + ++E ++E +GKKL E+ E +VL + +V +AKR+
Sbjct: 333 RVGRTARAGRGGRAISLVTELDVELVHEVESFLGKKLEEYEVSESDVLKNITKVYKAKRV 392
Query: 364 SQMTIKDSG 372
+ M ++DSG
Sbjct: 393 AIMKMEDSG 401
>gi|390332079|ref|XP_781784.3| PREDICTED: probable ATP-dependent RNA helicase DDX49
[Strongylocentrotus purpuratus]
Length = 478
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 182/404 (45%), Positives = 259/404 (64%), Gaps = 22/404 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D IG A+TGSGKT AFALPILQ L +E+ V F V++PTREL IQI+EQF
Sbjct: 49 GSDCIGCAKTGSGKTAAFALPILQKL---SEDPYGV---FGLVVTPTRELGIQIAEQFRV 102
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG I LR V++GG+DM++Q L K+PHIV+ATPGRL DH+ +T F L +K+LVLD
Sbjct: 103 LGKPIGLRVTVVIGGIDMVEQGRELSKKPHIVIATPGRLADHIKSTSTFDLHAIKFLVLD 162
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL +F L+ I + +P RQT LFSAT+T +K+LQ+ + P + + +T
Sbjct: 163 EADRLLEGNFGPDLEVIFDFLPAKRQTLLFSATITDTMKELQKMSMDKPFSWHSKAPVAT 222
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSA----SSTMVFTRTCDATRLLALMLRNLGQRA 244
V+ L Q+Y +PA+ KD YL+YI++E + S ++FT TC +L++MLRNLG +
Sbjct: 223 VEQLDQRYVLMPAQVKDAYLMYIISEFTEKNRDHSLIIFTSTCKYCHVLSIMLRNLGMQC 282
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
+ + Q R+ +L FK+ IL+ TD+ASRGLDIP V M+IN+++PT+ KDYIHR
Sbjct: 283 ATLHSLVKQKTRIASLAMFKSNHVRILVATDLASRGLDIPMVQMIINHNVPTSPKDYIHR 342
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRIS 364
VGRTARAGR G++I++V Q++++ IEK I K+ E+ E+ VL +L V AK +
Sbjct: 343 VGRTARAGRGGMSITMVTQFDVKLVQAIEKTINTKMTEYKVPEKNVLPILNEVALAKSKA 402
Query: 365 QMTIKDSGNKRRR------------KGGDEDDDIGRQFGINKKK 396
+M +++ RR K DE D+ ++ G ++KK
Sbjct: 403 EMKLEELDFGERRAIHKRKQLILEGKDPDEADEEIKRAGPSQKK 446
>gi|291231214|ref|XP_002735561.1| PREDICTED: Ddx49-A-prov protein-like [Saccoglossus kowalevskii]
Length = 445
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 181/392 (46%), Positives = 255/392 (65%), Gaps = 23/392 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D +G A+TGSGKT AFALPILQ L E +A VL+PTRELA QI+EQF
Sbjct: 49 GVDCLGCAKTGSGKTAAFALPILQKLCEDPY------GIYALVLTPTRELAFQIAEQFRI 102
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG I L+ AV++GG D+M+Q + L +PH+V+ATPGRL DH+ ++ FSL +K+LVLD
Sbjct: 103 LGKPIGLKDAVIIGGRDVMRQGMDLADKPHVVIATPGRLADHINSSNTFSLKKIKFLVLD 162
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL D F + L I + +P RQT LFSAT+T K++KLQ L P ++ ++ +T
Sbjct: 163 EADRLLEDTFAEDLQVIFDALPEKRQTLLFSATLTDKLEKLQTLALNKPFFWQSKAEIAT 222
Query: 189 VDTLKQQYRFVPAKYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
V+ L Q+Y +PAK +D YLV+IL +E S ++F+ TC + L LML+ L
Sbjct: 223 VEQLDQKYVLIPAKVRDAYLVHILQKICSETEDYSMIIFSNTCKNCQSLYLMLKALEFPC 282
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
P+ + Q R+ +L +FK+G IL+ TDVASRGLDIP V +V+N+++P + DY+HR
Sbjct: 283 TPLHSMIPQRDRIASLAQFKSGRVRILLATDVASRGLDIPIVQLVVNHNVPWSPIDYVHR 342
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRIS 364
VGRTARAGR G+A++L+ QY+++ IEK I KL E+P +++EVL +L V+ AKR +
Sbjct: 343 VGRTARAGRGGMALTLMTQYDVKLIEAIEKQINTKLTEYPVDDKEVLTILNEVSVAKREA 402
Query: 365 QMTIKDSGNKRRRKGGDEDDDIGRQFGINKKK 396
+M + E+ D G + INK+K
Sbjct: 403 EMRL-------------EEQDFGERKTINKRK 421
>gi|348676065|gb|EGZ15883.1| hypothetical protein PHYSODRAFT_504921 [Phytophthora sojae]
Length = 445
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 183/375 (48%), Positives = 251/375 (66%), Gaps = 16/375 (4%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+G+D+IG AQTGSGKT AFALPIL L + +A VL+PTRELA QI++QF
Sbjct: 39 SGRDVIGCAQTGSGKTAAFALPILHTL------SKDPYGPYALVLTPTRELAFQIADQFN 92
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
A GS +++RCAV+VGGVDM++Q+L L +RPHI+VATPGR DHL + ++ +KY+VL
Sbjct: 93 AFGSSMAVRCAVIVGGVDMLKQSLTLQQRPHIIVATPGRFRDHLLRVEPPNISLVKYVVL 152
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLK-NPVKIEAASKY 186
DEADRLL+ F K L I + +P RQT LFSATMT + +L++ L + + +
Sbjct: 153 DEADRLLDVSFAKDLSFIFDKLPAKRQTLLFSATMTANLDRLEQTALSDDAFRFDTTPSV 212
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASST-------MVFTRTCDATRLLALMLRN 239
TV TLKQ Y F+PA+ K + L E + SS+ M+F TC L+ +
Sbjct: 213 KTVATLKQFYLFIPAQGKKDQDLEQLLEAATSSSKRQLRSMMIFVSTCKMCELVGEIGNE 272
Query: 240 LGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSK 299
LG + + + MSQ++RL AL KFK+G +ILI TDVASRGLDIP VD+V+N+D+P ++
Sbjct: 273 LGTKCVTLHSMMSQNRRLAALGKFKSGLSHILISTDVASRGLDIPEVDVVLNFDLPRDAD 332
Query: 300 DYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAE--EEEVLLLLERV 357
DYIHRVGRTARAGR+G AISLV Q+++E IE +GKK+ ++ AE E++VL LL V
Sbjct: 333 DYIHRVGRTARAGRSGQAISLVTQHDIELLQNIEAKVGKKMDDYEAEAPEKKVLELLNDV 392
Query: 358 TEAKRISQMTIKDSG 372
T A R+++M + + G
Sbjct: 393 TTATRVAKMKLTERG 407
>gi|71747632|ref|XP_822871.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70832539|gb|EAN78043.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 512
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 181/392 (46%), Positives = 245/392 (62%), Gaps = 17/392 (4%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+AQTGSGKTGA+ LP++ LL Q VP V+ PTRELA Q++ QF
Sbjct: 77 GRDIIGVAQTGSGKTGAYVLPLVNWLL----TQAKVPYLSILVMVPTRELAQQVAAQFVM 132
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + LR A LVGG DM+ Q L +RPH+VV TPGR+ DHL NTKGF L L LVLD
Sbjct: 133 LGSSVGLRVATLVGGADMVDQACELSRRPHVVVGTPGRVKDHLNNTKGFQLVKLHALVLD 192
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD++L D+EK ++ IL +P RQT LFSAT++ K+ +LQ A L +PV +E K +T
Sbjct: 193 EADKMLEMDYEKEINAILEHLPHNRQTLLFSATLSTKIDRLQNASLNDPVLLEVHRKNTT 252
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTLKQ Y F P YL LT S + +VF R+ + L LR LG +A+P+
Sbjct: 253 VDTLKQYYVFAPFAQMLPYLHLYLTRESGNHILVFCRSAALVHRITLTLRVLGHQALPLM 312
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M Q R AL KFK G IL+CTDVA RGLDIP D+V+N+ +P +DYIHRVGRT
Sbjct: 313 GRMDQKNRNIALTKFKEGRVRILVCTDVAQRGLDIPRTDVVVNFALPDRVEDYIHRVGRT 372
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG G A+++++QY++ ++E G K E+P + +V +L+RV +A++ + +
Sbjct: 373 ARAGAQGKAVNIISQYDIVLLQKVEASTGVKCEEWPISDGDVAAVLQRVEDAEQEAVKEM 432
Query: 369 KDSGNK-------------RRRKGGDEDDDIG 387
++S + RR K D+D+G
Sbjct: 433 RESDQEAKFEREARQLTTARRAKRERGDNDMG 464
>gi|261332683|emb|CBH15678.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 512
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 181/392 (46%), Positives = 245/392 (62%), Gaps = 17/392 (4%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+AQTGSGKTGA+ LP++ LL Q VP V+ PTRELA Q++ QF
Sbjct: 77 GRDIIGVAQTGSGKTGAYVLPLVNWLL----TQAKVPYLSILVMVPTRELAQQVAAQFVM 132
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + LR A LVGG DM+ Q L +RPH+VV TPGR+ DHL NTKGF L L LVLD
Sbjct: 133 LGSSVGLRVATLVGGADMVDQACELSRRPHVVVGTPGRVKDHLNNTKGFQLVKLHALVLD 192
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD++L D+EK ++ IL +P RQT LFSAT++ K+ +LQ A L +PV +E K +T
Sbjct: 193 EADKMLEMDYEKEINAILEHLPHNRQTLLFSATLSTKIDRLQNASLNDPVLLEVHRKNTT 252
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTLKQ Y F P YL LT S + +VF R+ + L LR LG +A+P+
Sbjct: 253 VDTLKQYYVFAPFAQMLPYLHLYLTRESGNHILVFCRSAALVHRITLTLRVLGHQALPLM 312
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M Q R AL KFK G IL+CTDVA RGLDIP D+V+N+ +P +DYIHRVGRT
Sbjct: 313 GRMDQKNRNIALTKFKEGRVRILVCTDVAQRGLDIPRTDVVVNFALPDRVEDYIHRVGRT 372
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG G A+++++QY++ ++E G K E+P + +V +L+RV +A++ + +
Sbjct: 373 ARAGAQGKAVNIISQYDIVLLQKVEASTGVKCEEWPISDGDVAAVLQRVEDAEQEAVKEM 432
Query: 369 KDSGNK-------------RRRKGGDEDDDIG 387
++S + RR K D+D+G
Sbjct: 433 RESDQEAKFEREARQLTTARRAKRERGDNDMG 464
>gi|302817632|ref|XP_002990491.1| hypothetical protein SELMODRAFT_131776 [Selaginella moellendorffii]
gi|300141659|gb|EFJ08368.1| hypothetical protein SELMODRAFT_131776 [Selaginella moellendorffii]
Length = 469
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 181/369 (49%), Positives = 247/369 (66%), Gaps = 11/369 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G+AQTGSGKT AFALPILQ L EN + FA V++PTRELA QIS+QF+A
Sbjct: 90 GKDVLGMAQTGSGKTAAFALPILQRL---GENPYGI---FALVMTPTRELAFQISDQFKA 143
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLV 126
LG+G+ LRCAV+VGG+DM Q L +RPH+V+ATPGR+ H+ + + K+LV
Sbjct: 144 LGAGVHLRCAVVVGGMDMTTQAQILMERPHVVIATPGRIKAHIGSDPDIAAAFSKTKFLV 203
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
LDEAD LL+ F+ L I + I + RQT LFSATMT ++ L+ +A
Sbjct: 204 LDEADLLLDRGFQDELQTIFDGISKQRQTLLFSATMTGDLQALRDLFGHRAFFYQAYEGL 263
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSAS---STMVFTRTCDATRLLALMLRNLGQR 243
TV++L Q+Y F+P K K+ YL Y+L + S ++F C LL+L+L LG
Sbjct: 264 KTVESLDQRYIFMPGKVKNVYLTYLLENLELEDIRSVIIFVSRCRTCHLLSLILDELGIS 323
Query: 244 AIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIH 303
A+ + +Q +RL ALN+FK+G+ ILI TDVASRGLDIP+VD+V+NYDIP +KDY+H
Sbjct: 324 AVALHSVKTQPQRLAALNQFKSGQATILIATDVASRGLDIPTVDLVVNYDIPRFTKDYVH 383
Query: 304 RVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRI 363
RVGRTARAGR G AISLV + ++E ++E +GKKL E+ E +VL + +V +AKR+
Sbjct: 384 RVGRTARAGRGGRAISLVTELDVELVHEVESFLGKKLEEYEVSEADVLKNITKVYKAKRV 443
Query: 364 SQMTIKDSG 372
+ M ++DSG
Sbjct: 444 AIMKMEDSG 452
>gi|66826815|ref|XP_646762.1| hypothetical protein DDB_G0270396 [Dictyostelium discoideum AX4]
gi|74897375|sp|Q55BR9.1|DDX49_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx49; AltName:
Full=DEAD box protein 49
gi|60474611|gb|EAL72548.1| hypothetical protein DDB_G0270396 [Dictyostelium discoideum AX4]
Length = 508
Score = 343 bits (880), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 176/364 (48%), Positives = 240/364 (65%), Gaps = 8/364 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+I A+TGSGKT +FA+PIL L +E+ V FA +L+PTRELA+QI EQF A
Sbjct: 41 GRDIIASAKTGSGKTASFAIPILNQL---SEDPYGV---FAVILTPTRELAVQIGEQFNA 94
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+G+ +++ C+V++GG+D + Q L L KRPHI+VATPGRL HL N +L K+LVLD
Sbjct: 95 IGAPMNVNCSVVIGGIDNVTQALILDKRPHIIVATPGRLASHLNNGLKIALKFCKFLVLD 154
Query: 129 EADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
EADRLL +DFE + IL +P RQT LFSATMTK + KL L P E SKY
Sbjct: 155 EADRLLGEDFELEIASILEHLPPPEKRQTLLFSATMTKNLTKLDSIALNKPFIFEDNSKY 214
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
TVDTLKQ+Y ++PA KDCYLVYIL + SS +VF C A + ML L ++
Sbjct: 215 DTVDTLKQEYIYMPAPTKDCYLVYILKKHEGSSAIVFVNNCYAVEAVKGMLNKLDIPSVS 274
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
+ + Q RL AL FK+G+ +L+ TDVASRGLDIP V +VINY + +SKDYIHRVG
Sbjct: 275 LHSFLDQKSRLAALKTFKSGKVKVLVATDVASRGLDIPDVQIVINYKLSNSSKDYIHRVG 334
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQM 366
RTAR GR+G AIS + +++ IE++I K+L + +++EV L+ + A++I ++
Sbjct: 335 RTARFGRSGRAISFITPHDVSLIKGIEEIIKKQLELYKTDDDEVFRHLKEASTARKIVEI 394
Query: 367 TIKD 370
+ +
Sbjct: 395 HLDE 398
>gi|225681661|gb|EEH19945.1| ATP-dependent rRNA helicase rrp3 [Paracoccidioides brasiliensis
Pb03]
Length = 469
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 197/375 (52%), Positives = 255/375 (68%), Gaps = 26/375 (6%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQA--LLEIAENQRTVPAFFACVLSPTRELAIQISEQF 66
G+DLIGLA+TGSGKT AFALPILQ L + PA P + A
Sbjct: 93 GRDLIGLAETGSGKTAAFALPILQGELLSFLLRTHWGNPAN-----DPLSQSA------- 140
Query: 67 EALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSL-GTLKYL 125
CAV+VGG+DM+ Q +ALGK TPGRL+DHL NTKGFS T L
Sbjct: 141 ----------CAVIVGGMDMVPQAIALGKETSHHRRTPGRLLDHLENTKGFSPPATSNTL 190
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AAS 184
V+DEADRLL+ DF LD+IL V+PR R+TYL SATM+ KV+ LQRA L NP+++ ++S
Sbjct: 191 VMDEADRLLDLDFGPILDKILKVLPRERRTYLLSATMSSKVESLQRASLSNPLRVSISSS 250
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
KY TV TL Q + F+P KYKD YLVY+L E + S ++FTRT + T+ LA++LR LG A
Sbjct: 251 KYQTVSTLLQTFLFIPHKYKDIYLVYLLNEFAGQSAIIFTRTVNETQRLAILLRALGFGA 310
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
IP+ G +SQS RLGAL KF++ +IL+ TDVA+RGLDIPSVD+V+N+D+P +SK YIHR
Sbjct: 311 IPLHGQLSQSYRLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPPDSKTYIHR 370
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRIS 364
VGRTARAG++G A S V QY+LE +L+IE + KKL E+ E+EEV++L +RV EA+R +
Sbjct: 371 VGRTARAGKSGHAFSFVTQYDLEVWLRIENALDKKLEEYKVEKEEVMVLSDRVGEAQRHA 430
Query: 365 QMTIKDSGNKRRRKG 379
+K+ R KG
Sbjct: 431 ITEMKNLHENRGTKG 445
>gi|217073990|gb|ACJ85355.1| unknown [Medicago truncatula]
Length = 350
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 173/312 (55%), Positives = 228/312 (73%), Gaps = 7/312 (2%)
Query: 11 DLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALG 70
D+IG++ SGK GAF LPILQALLE N T FACVLSP+R+L +I+E F+ LG
Sbjct: 42 DVIGISPPRSGKAGAFVLPILQALLEAGPNLNTS---FACVLSPSRDLVFRIAEYFQVLG 98
Query: 71 SGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEA 130
S ++CA LV D++ QT + ++PH++V T ++ HL T+GFSL LKYLV+ EA
Sbjct: 99 SQFGVKCATLVEANDIIDQTNQILQQPHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEA 158
Query: 131 DRLLNDDFE-KSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
D LLND FE + L++IL++IP R+T+LFS+TMT+KV +QR L+NP+KI+ +SKYSTV
Sbjct: 159 DLLLNDQFEEQQLNDILSIIPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTV 218
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
T QQ F+PA KDCYLVYILTE++ + VFT+TC + LLAL+L+NL RAIPI
Sbjct: 219 VTQLQQSCFMPAMLKDCYLVYILTEMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIIS 278
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+MSQ+K+LGALN FK+G+ NIL+C++ A RGLDIP+VDMVINY+IP + DY+HRVG T
Sbjct: 279 YMSQAKKLGALNAFKSGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWT- 337
Query: 310 RAGRTGVAISLV 321
G AIS V
Sbjct: 338 --GHVNAAISFV 347
>gi|330803884|ref|XP_003289931.1| hypothetical protein DICPUDRAFT_154383 [Dictyostelium purpureum]
gi|325079973|gb|EGC33549.1| hypothetical protein DICPUDRAFT_154383 [Dictyostelium purpureum]
Length = 501
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 175/364 (48%), Positives = 245/364 (67%), Gaps = 8/364 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+I A+TGSGKT +FA+PIL L +E+ V FA VL+PTRELA+QI+EQF A
Sbjct: 42 GRDIIASAKTGSGKTASFAIPILNLL---SEDPYGV---FAVVLTPTRELAVQIAEQFSA 95
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+G+ ++++ + ++GG+D ++Q L L KRPHI+VATPGRL HLTN +L K+LVLD
Sbjct: 96 IGAPMNVQVSTVIGGIDTVKQALILDKRPHIIVATPGRLASHLTNGLKIALKFCKFLVLD 155
Query: 129 EADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
EADRLL +DFE + IL +P RQT LFSATMT +KKL+ L +P E SKY
Sbjct: 156 EADRLLGEDFELEIASILEYLPPPTQRQTLLFSATMTNNLKKLESISLNSPFIFEDNSKY 215
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
TVDTLKQ+Y ++PA+ KDCYLVY+L + S +VF C + + ML L A+
Sbjct: 216 DTVDTLKQEYIYMPAQAKDCYLVYLLKKHIGQSVIVFINNCYSVEAVKGMLNKLDIPAVS 275
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
+ + Q RL AL FK+G+ +LI TDVASRGLDIP V+MVINY + +SKDYIHRVG
Sbjct: 276 LHSFLDQKARLSALKVFKSGKVKVLIATDVASRGLDIPDVEMVINYKLSNSSKDYIHRVG 335
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQM 366
RTAR G++G AIS + ++++ IE +I K+L + +++EV L+ + A++I ++
Sbjct: 336 RTARFGKSGRAISFITPHDVQLIKNIELVIKKELELYKTDDDEVFRHLKESSTARKIVEV 395
Query: 367 TIKD 370
+ +
Sbjct: 396 HLDE 399
>gi|428181028|gb|EKX49893.1| hypothetical protein GUITHDRAFT_159399 [Guillardia theta CCMP2712]
Length = 413
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 185/385 (48%), Positives = 253/385 (65%), Gaps = 18/385 (4%)
Query: 4 WFCD----AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELA 59
W C AG++++ A+TGSGKT AFALPI+Q L + FA VL+PTRELA
Sbjct: 35 WNCIPPALAGRNILASAETGSGKTAAFALPIIQQL------SKDPYGVFAVVLTPTRELA 88
Query: 60 IQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGF-- 117
QI +QF ALGS I LR V+VGG+DMM+Q + L KRPH+V+ATPGRL DH+ ++ G
Sbjct: 89 FQIQDQFVALGSRIQLRNCVVVGGLDMMKQAVELCKRPHVVIATPGRLSDHINSSSGVKE 148
Query: 118 SLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQR-ACLKN 176
+L + +VLDEADRLL D FE L IL+ +P+ R TYLFSAT+T +++L+ +KN
Sbjct: 149 ALARTRVVVLDEADRLLEDCFETELANILDALPKNRSTYLFSATITASIEELKHLGAMKN 208
Query: 177 PVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALM 236
+ EA + +TV T+++ Y +P KD YLV+++ A + ++F + L+
Sbjct: 209 CFEYEADNPKTTVRTVREMYLHMPKMVKDVYLVHLVRNSEAKAMIIFVGRKTTCVFVQLL 268
Query: 237 LRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPT 296
L ++ + + + Q++RL AL++FK G C IL+ TDVASRGLDIP VD+VINYDIP
Sbjct: 269 LEDIPCSCLVVLLNSRQNRRLAALDRFKGGRCRILVATDVASRGLDIPKVDLVINYDIPN 328
Query: 297 NSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLER 356
++KDYIHRVGRTARAGRTG A+SLV QY++E IE KKL +F +EEEVL +
Sbjct: 329 DAKDYIHRVGRTARAGRTGTAVSLVTQYDVELVHNIEAETEKKLEDFGLKEEEVLESMSE 388
Query: 357 VTEAKRIS--QMTIKDS---GNKRR 376
V +AKR++ QM DS +KRR
Sbjct: 389 VMKAKRLARVQMLELDSEGQDDKRR 413
>gi|443682977|gb|ELT87384.1| hypothetical protein CAPTEDRAFT_162583 [Capitella teleta]
Length = 460
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 179/395 (45%), Positives = 250/395 (63%), Gaps = 19/395 (4%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+G D IG A+TGSGKT AFALPILQ L E FA VL+PTRELA QI EQF
Sbjct: 52 SGHDCIGCAKTGSGKTAAFALPILQKLCEDPY------GIFALVLTPTRELAYQIGEQFS 105
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
LG I L+ A++ GG DM+ Q L L ++PH+VV+TPGRL DHL SL + +LV+
Sbjct: 106 VLGKPIGLKEAIITGGRDMIDQGLLLAQKPHVVVSTPGRLADHLRTNADVSLKKIAFLVM 165
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADRLL D+F + L I +P+ RQT LFSATMT +K+L+ L P ++ K +
Sbjct: 166 DEADRLLEDNFGEQLQTIFAALPKKRQTLLFSATMTDTLKELEDVALNKPFFWQSKDKVA 225
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQR 243
TVD+L QQY +PA KD YL++IL E +SS M+FT TC ++L L+ + +G
Sbjct: 226 TVDSLTQQYVLMPADVKDAYLMHILRKFTEENPSSSVMIFTNTCKYCQILGLVAKEVGLE 285
Query: 244 AIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIH 303
+ + ++ Q RL +L KFK+ + I+ TDVASRGLDIP+VD+VIN++IP K+Y+H
Sbjct: 286 CVSLHSYLMQKIRLSSLAKFKSHQVKIMFATDVASRGLDIPTVDLVINHNIPNKPKNYVH 345
Query: 304 RVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRI 363
RVGRTARAGR G AI++V Q+++ IE I KL E +++EV ++ V+ A+R
Sbjct: 346 RVGRTARAGRLGDAITMVTQFDVNLVHAIEDHINAKLVEHKVDDDEVAKIVTEVSVARRE 405
Query: 364 SQMTI--KDSGNKRRRKG-------GDEDDDIGRQ 389
+Q+ + +D G K+ + G + D++ R+
Sbjct: 406 AQIKLDEQDFGEKKEQNKRMQMVLEGKDPDEVARK 440
>gi|328773329|gb|EGF83366.1| hypothetical protein BATDEDRAFT_8371 [Batrachochytrium
dendrobatidis JAM81]
Length = 460
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 174/360 (48%), Positives = 251/360 (69%), Gaps = 8/360 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG A+TGSGKT AFALPILQ L +E+ V FA VL+P RELA QI+EQF
Sbjct: 70 GRDIIGGAKTGSGKTAAFALPILQKL---SEDPYGV---FALVLTPARELAFQIAEQFRV 123
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHL-TNTKGFSLGTLKYLVL 127
LG+GI+L+ +V+VGG+DMM Q L L ++PH+++ATPGRL+DH+ +++ +++LV+
Sbjct: 124 LGTGINLKLSVVVGGMDMMSQALELSQKPHVIIATPGRLVDHIRSSSNAIHFKRIRFLVM 183
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADRLL+D F L+ IL+ +P+ RQT LF+ATMT ++K+LQ + P E A +YS
Sbjct: 184 DEADRLLDDTFSDDLEGILSQLPQKRQTLLFTATMTDEIKELQMSSKTLPFVYECAERYS 243
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTE-VSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
TV+ L QQY V + +D YL +I+ E +S + ++F C L +ML+ LG ++
Sbjct: 244 TVEKLDQQYILVSSNVRDAYLAHIVRESLSGKTMIIFASKCRTCETLRIMLKELGLKSTA 303
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
+ M Q+ RLG+L KFK+G ILI TDV SRGLDIP+V +VINY++P ++ DYIHRVG
Sbjct: 304 LHAQMPQNDRLGSLAKFKSGIVPILIATDVGSRGLDIPTVKVVINYELPADATDYIHRVG 363
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQM 366
RTARAG+ G+++S V++ +++ IEK KK+ E+ E +VL +L+ V AKRI++M
Sbjct: 364 RTARAGQGGMSLSFVSERDVDIIHNIEKKTKKKMTEYTVPENDVLEILDEVNLAKRIAKM 423
>gi|342184289|emb|CCC93770.1| putative ATP-dependent DEAD/H RNA helicase [Trypanosoma congolense
IL3000]
Length = 515
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/390 (45%), Positives = 244/390 (62%), Gaps = 19/390 (4%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+AQTGSGKTGA+ LP++ LL Q VP V+ PTRELA Q++ QF
Sbjct: 80 GRDVIGVAQTGSGKTGAYVLPLVNWLL----TQSKVPYLSVLVMVPTRELAQQVTAQFIM 135
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ + LR A LVGG DM+ Q L KRPH++V TPGR+ DHL NTKGF L L LVLD
Sbjct: 136 LGNSVGLRVATLVGGADMVDQACELSKRPHVIVGTPGRVKDHLNNTKGFQLVKLHALVLD 195
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD++L D+EK +D IL + RQT LFSAT+ K+ +LQ+A L++PV +E K +T
Sbjct: 196 EADKMLEMDYEKEIDAILEHLTYKRQTLLFSATLNTKIDRLQKASLRDPVLLEVHRKNTT 255
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+TLKQ Y F P YL L+ + + +VF R+ L L LR LG +A+P+
Sbjct: 256 VETLKQYYIFAPFAQMLPYLHLYLSRETGNHILVFCRSAAVVHRLTLTLRVLGHQALPLM 315
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M Q R AL KFK G+ IL+CTDVA RGLDIP D+V+N+ +P +DYIHRVGRT
Sbjct: 316 GRMDQRNRNIALTKFKEGKIRILVCTDVAQRGLDIPHTDVVVNFALPDRVEDYIHRVGRT 375
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG G A+++++QY++ ++E G K E+P + +V +L+RV +A++ + +
Sbjct: 376 ARAGAQGKAVNVISQYDIVLLQRVEASTGVKCEEWPISDGDVGAVLQRVEDAEQEAVREM 435
Query: 369 KDSGN---------------KRRRKGGDED 383
++S K +R+ GD D
Sbjct: 436 RESDQEAKFEKEARQLTTVKKAKRERGDND 465
>gi|340057234|emb|CCC51576.1| putative DEAD box RNA helicase [Trypanosoma vivax Y486]
Length = 509
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 172/354 (48%), Positives = 231/354 (65%), Gaps = 4/354 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+AQTGSGKTGA+ LP++ LL Q VP V+ PTRELA Q++ QF
Sbjct: 74 GRDVIGVAQTGSGKTGAYVLPLVDWLL----TQSKVPYLSVLVMVPTRELAQQVTAQFVM 129
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + LR LVGGVDM+ Q L KRPH+VV TPGR+ DHL NTKGF + L LVLD
Sbjct: 130 LGRSVGLRVVTLVGGVDMVDQACDLSKRPHVVVGTPGRVKDHLNNTKGFQMVKLHALVLD 189
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD++L D+EK +D IL +P RQT LFSAT+ K+ +LQ+A L +PV ++ K +T
Sbjct: 190 EADKMLEMDYEKEIDAILEHLPHSRQTLLFSATLNTKIDRLQKASLNDPVLLQVHRKNTT 249
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTLKQ Y F P L LT + + +VF R + L LR LG RA+P+
Sbjct: 250 VDTLKQFYIFTPFVQMLPTLHLYLTRETGNHILVFCRGAALVHRITLTLRILGHRALPLM 309
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M+Q R AL KFK G+ IL+CTDVA RGLDIP D+V+N+ +P +DYIHRVGRT
Sbjct: 310 GCMTQRNRNVALTKFKEGKARILVCTDVAQRGLDIPHTDVVVNFALPDRVEDYIHRVGRT 369
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
ARAG G A+++++QY++ ++E G K E+P ++ +V +L+RV +A++
Sbjct: 370 ARAGAQGKAVNIISQYDIVSLQKVEASTGVKCEEWPIQDGDVAAVLQRVEDAEQ 423
>gi|307209820|gb|EFN86616.1| Probable ATP-dependent RNA helicase DDX47 [Harpegnathos saltator]
Length = 286
Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 167/286 (58%), Positives = 217/286 (75%), Gaps = 11/286 (3%)
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
+ EADR+LN DFE +D+IL VIPR R+T LFSATMTKKV+KLQRA L+NPVK+E ++KY
Sbjct: 1 MGEADRILNMDFEIEVDKILRVIPRERRTLLFSATMTKKVQKLQRASLRNPVKVEVSTKY 60
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
TV+ L+Q Y F+P K+KD YLV+IL E++ +S M+F TC+ T AL+LRNLG A+P
Sbjct: 61 QTVEKLQQYYIFIPVKFKDVYLVHILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVP 120
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
+ G MSQ+KR+ AL KFKA +ILI TDVASRGLDIP VD+VIN+DIPT+SKDYIHRVG
Sbjct: 121 LHGQMSQNKRIAALTKFKARNRSILISTDVASRGLDIPHVDIVINFDIPTHSKDYIHRVG 180
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQM 366
RTARAGR+G +I+ V QY++E Y +IE+LI K+LP +P EE EV+LL ERVTEA+RI +M
Sbjct: 181 RTARAGRSGRSITFVTQYDVELYQRIEQLISKQLPLWPTEEGEVMLLQERVTEAQRIVKM 240
Query: 367 TIKDSGN-----KRRRKGGDEDDDIGRQFGI------NKKKLSKRK 401
+KD KR+++ GD +DD + G+ N KK+ KR+
Sbjct: 241 EVKDIEENKKLGKRKKRAGDNEDDTEQSIGVRKRIKGNGKKMGKRR 286
>gi|47211645|emb|CAF92169.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2310
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 182/345 (52%), Positives = 235/345 (68%), Gaps = 43/345 (12%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFALPILQ+LL A QR VL+PTRELA QISEQFEA
Sbjct: 32 GKDVIGLAETGSGKTGAFALPILQSLL--ASPQR----LHTLVLTPTRELAFQISEQFEA 85
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+DMM Q+L L K+PHIV+ATPGRL+DHL NTKGFSL +K+LV+D
Sbjct: 86 LGSSIGVKCAVIVGGIDMMSQSLVLAKKPHIVIATPGRLIDHLENTKGFSLRAVKFLVMD 145
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LK+PVK ++KY+T
Sbjct: 146 EADRILNMDFETEVDKILKVIPRERRTFLFSATMTKKVQKLQRAALKDPVKCAVSTKYTT 205
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD L+Q Y F+P+KYKDCYLV IL +++ +S ++F TC+ + +AL+LRNLG AIP+
Sbjct: 206 VDKLQQYYIFIPSKYKDCYLVSILNDLAGNSFIIFCSTCNNAQRVALLLRNLGITAIPLH 265
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ R+ +L G +P+ PT ++ + V R
Sbjct: 266 GQMSQ--RIESLI------------------GKKLPA--------FPTQEEEVMMLVERV 297
Query: 309 ARAGR------TGVAISLVNQYE-LEWYLQ--IEKLIGKKLPEFP 344
+ A R +G+ ++N Y+ L Y + IE GKK E P
Sbjct: 298 SEAQRFARLTYSGLFCVVINPYKNLPIYSENIIEMYRGKKRHEMP 342
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 332 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
IE LIGKKLP FP +EEEV++L+ERV+EA+R +++T
Sbjct: 272 IESLIGKKLPAFPTQEEEVMMLVERVSEAQRFARLT 307
>gi|449444278|ref|XP_004139902.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Cucumis
sativus]
gi|449475871|ref|XP_004154575.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Cucumis
sativus]
Length = 491
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 183/376 (48%), Positives = 251/376 (66%), Gaps = 11/376 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG D++G+AQTGSGKT AFALPILQ L E T FA V++PTRELA Q++EQF
Sbjct: 92 AGLDVLGIAQTGSGKTAAFALPILQRLSE------TPFGVFALVVTPTRELAYQLAEQFR 145
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSL--GTLKYL 125
ALGS ++LRC+V+VGG+DM+ QT +L KRPHIV+ATPGR+ L + + K+L
Sbjct: 146 ALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHIVIATPGRIKVLLEDNPDIPVVFSKTKFL 205
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ FE+ L I +PR RQT LFSATMTK ++ L + EA
Sbjct: 206 VLDEADRVLDVGFEEELKVIFQCLPRNRQTLLFSATMTKDLETLHKLSANKAYFYEAYEG 265
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT---EVSASSTMVFTRTCDATRLLALMLRNLGQ 242
+ TVD LKQQY F+P KD YL+++L+ ++ S ++F +TC + LL L+L L Q
Sbjct: 266 FKTVDMLKQQYVFIPKDVKDLYLLHLLSKMEDMGIRSAIIFVQTCKSCHLLGLLLEALDQ 325
Query: 243 RAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYI 302
+ SQS+RL AL +FK+G +L+ TDVASRGLDIP+VD+VINYDIP +DY+
Sbjct: 326 EVAALHSVKSQSERLAALYRFKSGRVPVLLATDVASRGLDIPTVDLVINYDIPRFPRDYV 385
Query: 303 HRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
HRVGRTARAGR G+A+S + Q ++ +IE +GK+L F +E EVL + +V +A+
Sbjct: 386 HRVGRTARAGRGGLAVSFITQNDVHLIHEIEANLGKQLEIFECKENEVLENITKVYKARH 445
Query: 363 ISQMTIKDSGNKRRRK 378
+++M + D G + + K
Sbjct: 446 VAKMKMVDGGFEEKVK 461
>gi|295670994|ref|XP_002796044.1| DEAD-box ATP-dependent RNA helicase [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226284177|gb|EEH39743.1| DEAD-box ATP-dependent RNA helicase [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 319
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/296 (58%), Positives = 228/296 (77%), Gaps = 1/296 (0%)
Query: 86 MMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEI 145
M+ Q +ALGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+DEADRLL+ DF LD+I
Sbjct: 1 MVPQAIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKI 60
Query: 146 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYSTVDTLKQQYRFVPAKYK 204
L V+PR R+TYLFSATM+ KV+ LQRA L NP+++ ++SKY TV L Q + F+P KYK
Sbjct: 61 LKVLPRERRTYLFSATMSSKVESLQRASLSNPLRVSISSSKYQTVSALLQTFLFIPHKYK 120
Query: 205 DCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFK 264
D YLVY+L E + S ++FTRT + T+ LA++LR LG AIP+ G +SQS RLGAL+KF+
Sbjct: 121 DIYLVYLLNEFAGQSAIIFTRTVNETQRLAILLRALGFGAIPLHGQLSQSSRLGALSKFR 180
Query: 265 AGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQY 324
+ +IL+ TDVA+RGLDIPSVD+V+N+D+P +SK YIHRVGRTARAG++G A S V QY
Sbjct: 181 SRSRDILVATDVAARGLDIPSVDVVLNFDLPPDSKTYIHRVGRTARAGKSGHAFSFVTQY 240
Query: 325 ELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGG 380
+LE +L+IE + KKL E+ E+EEV++L +RV+EA+R + +K+ R KG
Sbjct: 241 DLEVWLRIENALDKKLEEYKVEKEEVMVLSDRVSEAQRHAITEMKNLHENRGSKGA 296
>gi|449533536|ref|XP_004173730.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like, partial
[Cucumis sativus]
Length = 206
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 164/202 (81%), Positives = 181/202 (89%), Gaps = 6/202 (2%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
KDLIGLAQTGSGKTGAFALPILQALLE + AFFACVLSPTRELAIQI+EQFEAL
Sbjct: 1 KDLIGLAQTGSGKTGAFALPILQALLEAPQ------AFFACVLSPTRELAIQIAEQFEAL 54
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GSGI ++CAVLVGGVDM+QQ + L KRPH+VV TPGRL+DHLTNTKGFSL TLKYLVLDE
Sbjct: 55 GSGIGIKCAVLVGGVDMVQQAINLAKRPHVVVGTPGRLVDHLTNTKGFSLRTLKYLVLDE 114
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADRLLN+DFEKS+DEILN IPR R+TYLFSATMTKKV+KLQRACL+NPVKIEAA+KYSTV
Sbjct: 115 ADRLLNEDFEKSIDEILNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTV 174
Query: 190 DTLKQQYRFVPAKYKDCYLVYI 211
DTLKQQY F+PAKYK L ++
Sbjct: 175 DTLKQQYCFIPAKYKVSILFFL 196
>gi|340376506|ref|XP_003386773.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like
[Amphimedon queenslandica]
Length = 441
Score = 333 bits (855), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 186/373 (49%), Positives = 236/373 (63%), Gaps = 11/373 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT AFALPIL +L R +A VL+PTRELA QIS+QF
Sbjct: 42 GRDCIGSAKTGSGKTAAFALPILHSL------SRDPYGIYALVLTPTRELAYQISDQFCV 95
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG I ++ V+VGGVDMM Q LAL +RPHIVVATPGRL DHL +T + +KYLVLD
Sbjct: 96 LGKHIGVKSEVIVGGVDMMVQALALSRRPHIVVATPGRLADHLQSTDTVFMEKIKYLVLD 155
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL FE L I +P RQT LFSAT+T + +L+ P EA + ST
Sbjct: 156 EADRLLEKCFEDDLSVIFERLPEKRQTLLFSATLTDSLNRLKELSTTPPFCWEAPKEIST 215
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTE---VSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
VD+L Q Y +PA+ KDCYL+ +L + V + ++FT TC + L+L+ L +
Sbjct: 216 VDSLDQHYVLIPAQVKDCYLITLLDQFHDVDKKTIILFTDTCRNCEIYGLLLKQLEFPNV 275
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ M+Q +RL +L FK+ + IL+ TDVASRGLDIP V +VIN +IP +SKDYIHRV
Sbjct: 276 TLHSLMTQRRRLSSLAMFKSRQVRILVATDVASRGLDIPLVGVVINLNIPASSKDYIHRV 335
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
GRTARAG G AISL+ QY++ IE I +L E+P EE+ L L VT AKR
Sbjct: 336 GRTARAGHGGQAISLMTQYDVTRVKNIENDIKTELVEYPIEEDIALKNLSVVTMAKREVD 395
Query: 366 MTIK--DSGNKRR 376
+ + D G KRR
Sbjct: 396 IKLSETDFGKKRR 408
>gi|403303461|ref|XP_003942345.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Saimiri
boliviensis boliviensis]
Length = 483
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 186/410 (45%), Positives = 250/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPYG------IFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LV+D
Sbjct: 93 LGKPLGLKDCIIVGGLDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +++LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTVDLETILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
STV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 213 VSTVEQLDQRYLLVPEKVKDAYLVHLIQRFQDEHEDWSVIIFTNTCKTCQILCMMLRKFS 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I KKL EF EE EVL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVR 392
Query: 362 RISQMTI-------KDSGNKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ + K NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEAAHFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|426228752|ref|XP_004008460.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 isoform 1
[Ovis aries]
Length = 483
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 184/410 (44%), Positives = 251/410 (61%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LV+D
Sbjct: 93 LGKPLGLKDCIVVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSMKKIRFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +++LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTVDLEVILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 213 VRTVEQLDQRYLLVPEKVKDAYLVHLIQNFQDEHEDWSIIIFTNTCKTCQILCMMLRKFS 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I KKL EFP EE +VL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFPVEEAQVLQILTQVNVVR 392
Query: 362 RISQMTIKDSG-------NKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ ++ + NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEAANFDEKKEINKRKQMILEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|307110624|gb|EFN58860.1| hypothetical protein CHLNCDRAFT_48551 [Chlorella variabilis]
Length = 407
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 179/368 (48%), Positives = 245/368 (66%), Gaps = 11/368 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+++IG+A TGSGKT AFALPILQ L A+N V FA VL+PTRELA Q+++QF
Sbjct: 17 AGRNVIGVAHTGSGKTAAFALPILQKL---AKNPFGV---FALVLTPTRELAFQLADQFR 70
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRL--MDHLTNTKGFSLGTLKYL 125
ALG+G+SL+ V+VGG+DM Q L +RPH+V+ATPGRL + L G ++L
Sbjct: 71 ALGTGMSLKDCVVVGGLDMTAQAKELARRPHVVIATPGRLRGLLQLDGELARVFGRARFL 130
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADRLL FE L +L +P RQT LFSATMT+ + +LQ+ L++ +A
Sbjct: 131 VLDEADRLLEPSFESELAVVLGALPERRQTLLFSATMTQTLVELQKQLLRDAYHFQAYEG 190
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYIL---TEVSASSTMVFTRTCDATRLLALMLRNLGQ 242
T L+Q+Y F+PAK K+ YLV++L E+ S ++F TC LL+L+L LG
Sbjct: 191 LQTAAKLRQEYLFLPAKVKEVYLVHLLGQLEELQCRSAIIFAGTCKGCHLLSLLLEELGI 250
Query: 243 RAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYI 302
A + H Q RL AL++FK+G IL+ TDVASRGLDIPSVD+V+NYD+P ++DY+
Sbjct: 251 AAAALHSHKPQRARLEALHRFKSGSVPILLATDVASRGLDIPSVDLVVNYDLPQMARDYV 310
Query: 303 HRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
HRVGRTARAGR G ++S V QY+++ QIE L+G++L +F EE E L + +V AKR
Sbjct: 311 HRVGRTARAGRRGWSLSFVTQYDIDLVQQIEVLVGQQLGKFELEEAEALKGITKVYSAKR 370
Query: 363 ISQMTIKD 370
+ + + +
Sbjct: 371 AAALRVAE 378
>gi|297704172|ref|XP_002828993.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Pongo abelii]
Length = 483
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 186/410 (45%), Positives = 250/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPYG------IFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LV+D
Sbjct: 93 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +++LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTVDLEAILAAVPAHRQTLLFSATLTDTLRELQGLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
STV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 213 VSTVEQLDQRYLLVPEKVKDAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFS 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I KKL EF EE EVL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVR 392
Query: 362 RISQMTI-------KDSGNKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ + K NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEAAHFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|355703340|gb|EHH29831.1| Putative ATP-dependent RNA helicase DDX49 [Macaca mulatta]
Length = 483
Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 186/410 (45%), Positives = 250/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPYG------IFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LV+D
Sbjct: 93 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +++LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
STV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 213 VSTVEQLDQRYLLVPEKVKDAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFS 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSVYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I KKL EF EE EVL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLVHTIEEQIKKKLEEFSVEEAEVLQILTQVNVVR 392
Query: 362 RISQMTI-------KDSGNKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ + K NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEAAHFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|344283067|ref|XP_003413294.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Loxodonta
africana]
Length = 481
Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 185/410 (45%), Positives = 252/410 (61%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LVLD
Sbjct: 93 LGKPLGLKDCIIVGGMDMVTQALELSRKPHVVIATPGRLADHLRSSSTFSIKKIRFLVLD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +++LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTTDLEVILGAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR L
Sbjct: 213 VRTVEQLDQRYLLVPEKVKDAYLVHLIQGFQDEHEDWSIIIFTNTCKTCQILCMMLRKLS 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G+AI+LV QY++ IE+ I KKL EF EE EVL +L +V +
Sbjct: 333 IHRVGRTARAGRQGMAITLVTQYDIHLVHAIEEQIKKKLDEFSVEEAEVLRILTQVNVVR 392
Query: 362 RISQMTIKDSG-------NKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ ++ + NKR++ +G D D + R+ + K + R+
Sbjct: 393 RECEIKLEATNFDERKEINKRKQLILEGKDPDLEAKRKTELAKIRQKNRR 442
>gi|62898149|dbj|BAD97014.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 variant [Homo sapiens]
Length = 483
Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 186/410 (45%), Positives = 250/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LV+D
Sbjct: 93 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +++LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
STV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 213 VSTVEQLDQRYLLVPEKVKDAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFS 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I KKL EF EE EVL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVR 392
Query: 362 RISQMTI-------KDSGNKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ + K NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEAAHFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|402904855|ref|XP_003915254.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Papio anubis]
Length = 483
Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 186/410 (45%), Positives = 250/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPYG------IFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LV+D
Sbjct: 93 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +++LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
STV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 213 VSTVEQLDQRYLLVPEKVKDAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFS 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I KKL EF EE EVL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVR 392
Query: 362 RISQMTI-------KDSGNKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ + K NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEAAHFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|380786067|gb|AFE64909.1| putative ATP-dependent RNA helicase DDX49 [Macaca mulatta]
Length = 483
Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 186/410 (45%), Positives = 250/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPYG------IFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LV+D
Sbjct: 93 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +++LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
STV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 213 VSTVEQLDQRYLLVPEKVKDAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFS 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSVYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I KKL EF EE EVL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVR 392
Query: 362 RISQMTI-------KDSGNKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ + K NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEAAHFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|31542656|ref|NP_061943.2| probable ATP-dependent RNA helicase DDX49 [Homo sapiens]
gi|350538363|ref|NP_001233517.1| probable ATP-dependent RNA helicase DDX49 [Pan troglodytes]
gi|397493813|ref|XP_003817790.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Pan paniscus]
gi|74753527|sp|Q9Y6V7.1|DDX49_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX49; AltName:
Full=DEAD box protein 49
gi|2443870|gb|AAB81544.1| R27090_2 [Homo sapiens]
gi|12803677|gb|AAH02674.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Homo sapiens]
gi|119605165|gb|EAW84759.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49, isoform CRA_b [Homo
sapiens]
gi|312152524|gb|ADQ32774.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [synthetic construct]
gi|343960719|dbj|BAK61949.1| probable ATP-dependent RNA helicase DDX49 [Pan troglodytes]
gi|410219928|gb|JAA07183.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Pan troglodytes]
gi|410255310|gb|JAA15622.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Pan troglodytes]
gi|410295734|gb|JAA26467.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Pan troglodytes]
gi|410333447|gb|JAA35670.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Pan troglodytes]
Length = 483
Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 186/410 (45%), Positives = 250/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPYG------IFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LV+D
Sbjct: 93 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +++LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
STV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 213 VSTVEQLDQRYLLVPEKVKDAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFS 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I KKL EF EE EVL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVR 392
Query: 362 RISQMTI-------KDSGNKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ + K NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEAAHFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|431922034|gb|ELK19207.1| Putative ATP-dependent RNA helicase DDX49 [Pteropus alecto]
Length = 483
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 185/410 (45%), Positives = 250/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LV+D
Sbjct: 93 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +K+LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTMDLEVILAAVPAQRQTLLFSATLTDTLKELQGLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 213 VRTVEQLDQRYLLVPEKVKDAYLVHLIQNFQDEHEDWSIIIFTNTCKTCQILCMMLRKFN 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPAVQLVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I KKL EF EE EVL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVR 392
Query: 362 RISQMTIKDSG-------NKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ ++ + NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEAANFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|355755632|gb|EHH59379.1| Putative ATP-dependent RNA helicase DDX49 [Macaca fascicularis]
Length = 483
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 186/410 (45%), Positives = 250/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPYG------IFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LV+D
Sbjct: 93 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +++LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
STV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 213 VSTVEQLDQRYLLVPEKVKDAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFS 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I KKL EF EE EVL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVR 392
Query: 362 RISQMTI-------KDSGNKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ + K NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEAAHFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|321466431|gb|EFX77426.1| hypothetical protein DAPPUDRAFT_213372 [Daphnia pulex]
Length = 478
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 172/392 (43%), Positives = 251/392 (64%), Gaps = 23/392 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG +TGSGKT AFALPI+Q L + +A VL+PTRELA QI++QF+
Sbjct: 46 GRDCIGCDRTGSGKTFAFALPIVQTL------SKDPYGIYALVLTPTRELAYQIADQFQI 99
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+G I+LR +V+VGG+ MM Q + L PHIV+ATPGRL DHL + K FS T+KYLV+D
Sbjct: 100 IGKPINLRMSVIVGGMGMMDQGIELSNHPHIVIATPGRLADHLESCKTFSFKTIKYLVMD 159
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL +F++ L I +P RQT LFSAT+T + KL+ L P A + +T
Sbjct: 160 EADRLLEGNFDEQLQIIFQALPEKRQTLLFSATITDTLNKLREVALNKPFMWSAPVETAT 219
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
V+ L Q+Y VPA +KD YLV+++ E S +VFT TC + ++L++ L LG ++
Sbjct: 220 VEELDQRYILVPADFKDGYLVHVVQNFREEKPKGSIIVFTDTCRSCQILSMTLLELGFQS 279
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
+ + MSQ +R+ L KF++ IL+ TDVASRGLDIP+V +++N+++P+N K+Y+HR
Sbjct: 280 LCLHSMMSQRERIATLTKFRSNTVKILVATDVASRGLDIPTVQLIVNHNVPSNPKEYVHR 339
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRIS 364
VGRTARAGR G +++L+ +++ IE I K+L EF +E+EV+ +L +V KR
Sbjct: 340 VGRTARAGRGGFSLTLITPNDIKLLHAIEGRICKELKEFKIKEKEVVKILTQVAVTKREQ 399
Query: 365 QMTIKDSGNKRRRKGGDEDDDIGRQFGINKKK 396
++ + ++ D G + INK+K
Sbjct: 400 EINL-------------DEQDFGEKKRINKRK 418
>gi|440904005|gb|ELR54578.1| Putative ATP-dependent RNA helicase DDX49, partial [Bos grunniens
mutus]
Length = 486
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 184/410 (44%), Positives = 251/410 (61%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 42 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 95
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LV+D
Sbjct: 96 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMD 155
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +++LQ P EA +
Sbjct: 156 EADRLLEQGCTDFTVDLEVILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAP 215
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 216 VRTVEQLDQRYLLVPEKVKDAYLVHLIQNFQDEHEDWSIIIFTNTCKTCQILCMMLRKFN 275
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 276 FPTMALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 335
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I KKL EFP EE +VL +L +V +
Sbjct: 336 IHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFPVEEAQVLQILTQVNVVR 395
Query: 362 RISQMTIKDSG-------NKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ ++ + NKR++ +G D D + R+ + K K R+
Sbjct: 396 RECEIKLEAANFDEKKEINKRKQMILEGKDPDLEAKRKAELAKIKQKNRR 445
>gi|224098856|ref|XP_002311293.1| predicted protein [Populus trichocarpa]
gi|222851113|gb|EEE88660.1| predicted protein [Populus trichocarpa]
Length = 496
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 175/369 (47%), Positives = 243/369 (65%), Gaps = 10/369 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+G+D++GLAQTGSGKT AFALPIL L AE+ V FA V++PTRELA Q++EQF
Sbjct: 98 SGRDVLGLAQTGSGKTAAFALPILHRL---AEDPFGV---FALVITPTRELAYQLAEQFR 151
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTK-GFSLGTLKYLV 126
A GS + LRCAV+VGG+D++ Q L RPH+V+ATPGR+ L N K+LV
Sbjct: 152 AFGSCLHLRCAVVVGGMDLLTQAKTLMGRPHVVIATPGRIKVLLENPDISPVFSRTKFLV 211
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
LDEADRL++ F++ L + +P+ RQT LFSATMT +++ L E +
Sbjct: 212 LDEADRLIDVGFQEELRVVFKCLPKSRQTLLFSATMTSELQTLLELSENKAYFYEEYEGF 271
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILT---EVSASSTMVFTRTCDATRLLALMLRNLGQR 243
TVDTL QQY +P K+ YLVYIL+ E+ S ++F C RLL+ +L+ L
Sbjct: 272 KTVDTLNQQYIQMPKNVKEVYLVYILSKMEEMGIRSAIIFVSACSTCRLLSSLLKELDHE 331
Query: 244 AIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIH 303
+ SQS RL +L++FK+G+ +ILI TD+ASRGLDIP+VD+VINYD+P + DY+H
Sbjct: 332 PATLYSLESQSARLASLHRFKSGQASILIATDLASRGLDIPTVDLVINYDLPRDPTDYVH 391
Query: 304 RVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRI 363
RVGRTARAGR G+A+SLV Q++ + IE +GK+ +F +E EVL + +V +A+R+
Sbjct: 392 RVGRTARAGREGLAVSLVAQHDGKLMKAIEAEVGKQFEKFECKENEVLSDITKVYKARRV 451
Query: 364 SQMTIKDSG 372
++M + D G
Sbjct: 452 AKMKMMDDG 460
>gi|149757285|ref|XP_001503455.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 isoform 1
[Equus caballus]
Length = 483
Score = 330 bits (845), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 185/410 (45%), Positives = 252/410 (61%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPYG------IFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LVLD
Sbjct: 93 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSSTFSIKKIRFLVLD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +++LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR G
Sbjct: 213 VRTVEQLDQRYLLVPEKVKDAYLVHLIQNFQDEHQDWSIIIFTNTCKTCQILCMMLRKFG 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
A+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPAVALHSTMRQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I KKL EF +E +VL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFSVKEADVLQILTQVNVVR 392
Query: 362 RISQMTIKDSG-------NKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ ++ + NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEAANFGEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|29612573|gb|AAH49396.1| Ddx49-A-prov protein, partial [Xenopus laevis]
Length = 482
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 180/398 (45%), Positives = 247/398 (62%), Gaps = 23/398 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 42 GRDCMGCAKTGSGKTAAFVLPILQKLSE------DPFGIFCLVLTPTRELAYQIAEQFRV 95
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ +++GG+DM+ Q L L ++PHIV+ATPGRL DH+ ++ FS+ +++LV+D
Sbjct: 96 LGKPLGLKDCIIIGGMDMVAQALELSRKPHIVIATPGRLADHIRSSNTFSIKKIRFLVMD 155
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF + L IL +P RQT LFSAT+T +++L+ + P E+ S+
Sbjct: 156 EADRLLEQGCTDFTQDLQVILEAVPAQRQTLLFSATLTDTLQELKTVAMNKPFFWESTSE 215
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y VP K KD YLVY++ E S M+FT TC ++L +MLR
Sbjct: 216 VRTVEQLDQRYILVPEKVKDAYLVYLIQKFQDEHEDWSIMIFTNTCKTCQILNMMLREFS 275
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
++ + M Q +R AL KFK+ ILI TDVA+RGLDIP+V +VIN++ P K Y
Sbjct: 276 FPSVALHSMMKQKQRFAALAKFKSSVFKILIATDVAARGLDIPTVQVVINHNTPGLPKIY 335
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G+AI+LV QY++ IE I KL EF +E EVL +L +V A+
Sbjct: 336 IHRVGRTARAGRNGMAITLVTQYDIHLVHAIEGQINMKLEEFKVKENEVLKILTQVNVAR 395
Query: 362 RISQMTI-------KDSGNKRRR---KGGDEDDDIGRQ 389
R ++ + K NKR++ +G D D + R+
Sbjct: 396 RECEIKLECTDFDEKKEINKRKQLILEGKDPDLEAKRK 433
>gi|395847961|ref|XP_003796632.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Otolemur
garnettii]
Length = 483
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 186/410 (45%), Positives = 250/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GHDCLGCAKTGSGKTAAFVLPILQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LV+D
Sbjct: 93 LGKPLGLKECIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL+ +P RQT LFSAT+T +K+LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTVDLEVILSAVPTRRQTLLFSATLTDTLKELQGLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
STV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 213 VSTVEQLDQRYLLVPEKVKDAYLVHLIQNFQDEHKDWSIIIFTNTCKTCQILCMMLRKFN 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I KKL EF +E EVL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFSVDEAEVLQILTQVNVVR 392
Query: 362 RISQMTI-------KDSGNKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ + K NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEAAHFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|384246378|gb|EIE19868.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 508
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 182/364 (50%), Positives = 246/364 (67%), Gaps = 19/364 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D++G A TGSGKT AFALPILQ L R FA VL+PTRELA+Q+++QF A
Sbjct: 117 GRDVLGTAHTGSGKTAAFALPILQRL------AREPYGIFALVLTPTRELAMQLADQFRA 170
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMD----HLTNTKGFSLGTLKY 124
LGSG+SL AV++GG+DM Q AL +RPHI+VATPGRL D H +GF+ + +
Sbjct: 171 LGSGMSLTDAVVIGGLDMQSQAKALAQRPHIIVATPGRLRDLLSAHADLAEGFN--RVAF 228
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADRLL FE L I + +P RQT LFSAT+T+ + LQ + L++ +A
Sbjct: 229 LVLDEADRLLEPTFESELRVIASHLPAQRQTLLFSATLTRSLATLQASALRDAFLFQA-D 287
Query: 185 KYSTVDT---LKQQYRFVPAKYKDCYLVYILT---EVSASSTMVFTRTCDATRLLALMLR 238
Y ++T L++ Y F+PAK ++ YLV++L E S S +VF TC LL+L+L
Sbjct: 288 AYEGLETAVNLREDYLFIPAKVRELYLVHVLESLEEFSIRSAIVFCSTCRGCHLLSLLLA 347
Query: 239 NLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNS 298
LG ++ + H++Q +RL AL++FK+G IL+ TDVASRGLDIP+VD+V+NY++P+
Sbjct: 348 ELGVASVALHSHLTQGRRLAALHRFKSGGVPILLATDVASRGLDIPTVDLVVNYELPSLP 407
Query: 299 KDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVT 358
+DY+HRVGRTARAGR G A+SLV QY++E IE LIG +L EF +E +VL + RV
Sbjct: 408 RDYVHRVGRTARAGRGGWALSLVTQYDVELVQHIESLIGHQLREFTLDEAQVLKGITRVY 467
Query: 359 EAKR 362
AKR
Sbjct: 468 SAKR 471
>gi|311249349|ref|XP_003123587.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Sus scrofa]
Length = 483
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 184/410 (44%), Positives = 250/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LV+D
Sbjct: 93 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +++LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRELQSLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 213 VRTVEQLDQRYLLVPEKVKDAYLVHLIQNFQDEHEDWSIIIFTNTCKTCQILCMMLRKFN 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I KKL EF EE EVL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVR 392
Query: 362 RISQMTIKDSG-------NKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ ++ + NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEAANFDEKKEINKRKQMILEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|159467789|ref|XP_001692074.1| hypothetical protein CHLREDRAFT_128577 [Chlamydomonas reinhardtii]
gi|158278801|gb|EDP04564.1| predicted protein [Chlamydomonas reinhardtii]
Length = 488
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 184/353 (52%), Positives = 239/353 (67%), Gaps = 10/353 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLAQTGSGKT AFALPILQAL A++ V FA VL+PTRELA+QISEQF A
Sbjct: 142 GRDVIGLAQTGSGKTAAFALPILQAL---AKDPYGV---FALVLTPTRELAVQISEQFRA 195
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+G+ L+ V++GGVDM QQ L KRPH+VVATPGRL D + + + ++LVLD
Sbjct: 196 LGAGMRLKELVVIGGVDMQQQARELAKRPHVVVATPGRLADWVMSGLAAGMARCRFLVLD 255
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ FE L IL +P RQT LFSATMTK + LQR L + +A T
Sbjct: 256 EADRVLDSTFEDDLRRILKALPAARQTLLFSATMTKSLIALQRQSLADAHVFQAYEGLRT 315
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEV----SASSTMVFTRTCDATRLLALMLRNLGQRA 244
D LK++Y F+PAK K+ YL ++LT V S ++F TC LL+L+L LG A
Sbjct: 316 ADKLKEEYLFLPAKVKEVYLHHLLTVVLPARKVRSAIIFAGTCRGCHLLSLLLEELGLPA 375
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
+ + SQ RL AL +FK+ + +L+ TDVASRGLDIPSVD VIN+D+P ++DY+HR
Sbjct: 376 VALHSGKSQKGRLAALARFKSEQVPLLLATDVASRGLDIPSVDAVINFDLPMLARDYVHR 435
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERV 357
VGRTARAGR+G ++SLV QY++ IE+LIG L + EE+EVL + +V
Sbjct: 436 VGRTARAGRSGWSVSLVTQYDVGLVGAIEELIGHTLEQHVLEEQEVLKGITKV 488
>gi|47937760|gb|AAH72323.1| Ddx49-A-prov protein, partial [Xenopus laevis]
Length = 429
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 176/379 (46%), Positives = 240/379 (63%), Gaps = 15/379 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 45 GRDCMGCAKTGSGKTAAFVLPILQKLSEDPF------GIFCLVLTPTRELAYQIAEQFRV 98
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ +++GG+DM+ Q L L ++PHIV+ATPGRL DH+ ++ FS+ +++LV+D
Sbjct: 99 LGKPLGLKDCIIIGGMDMVAQALELSRKPHIVIATPGRLADHIRSSNTFSIKKIRFLVMD 158
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF + L IL +P RQT LFSAT+T +++L+ + P E+ S+
Sbjct: 159 EADRLLEQGCTDFTQDLQVILEAVPAQRQTLLFSATLTDTLQELKTVAMNKPFFWESTSE 218
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y VP K KD YLVY++ E S M+FT TC ++L +MLR
Sbjct: 219 VRTVEQLDQRYILVPEKVKDAYLVYLIQKFQDEHEDWSIMIFTNTCKTCQILNMMLREFS 278
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
++ + M Q +R AL KFK+ ILI TDVA+RGLDIP+V +VIN++ P K Y
Sbjct: 279 FPSVALHSMMKQKQRFAALAKFKSSVFKILIATDVAARGLDIPTVQVVINHNTPGLPKIY 338
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G+AI+LV QY++ IE I KL EF +E EVL +L +V A+
Sbjct: 339 IHRVGRTARAGRNGMAITLVTQYDIHLVHAIEGQINMKLEEFKVKENEVLKILTQVNVAR 398
Query: 362 RISQMTIK--DSGNKRRRK 378
R ++ ++ D K+R K
Sbjct: 399 RECEIKLECTDFDEKKRDK 417
>gi|326934515|ref|XP_003213334.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like
[Meleagris gallopavo]
Length = 482
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 184/405 (45%), Positives = 249/405 (61%), Gaps = 23/405 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LP+LQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPVLQVLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ V+VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FSL LK+LVLD
Sbjct: 93 LGKPLGLKDCVVVGGLDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSLKKLKFLVLD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T + +L+ + P EAAS+
Sbjct: 153 EADRLLEQGCADFTADLEVILEAVPARRQTLLFSATLTDTLNELKSLAMNRPFFWEAASE 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TVD L Q+Y VP KD YLV+++ E S ++FT+TC ++L +MLR
Sbjct: 213 VRTVDELDQRYLLVPEAVKDAYLVHLIQTFQDEHEDWSIIIFTKTCKECQILNMMLRKFS 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
++ + M Q +R AL KFK+ ILI TDVA+RGLDIP+V +VIN++ P K Y
Sbjct: 273 FPSVALHSMMKQRQRFAALAKFKSSIFKILIATDVAARGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G++I++V QY++ IE+ I KL EF EE+ VL +L V +
Sbjct: 333 IHRVGRTARAGRNGISITMVTQYDIHLVHAIEEEIKLKLQEFSVEEKLVLDILNHVNVTR 392
Query: 362 RISQMTI-------KDSGNKRRR---KGGDEDDDIGRQFGINKKK 396
R ++ + K NKR++ +G D D + R+ + K K
Sbjct: 393 RECEIELEYMDFDEKKEINKRKQMILEGKDPDLEEKRKAELAKIK 437
>gi|410921858|ref|XP_003974400.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Takifugu
rubripes]
Length = 477
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 178/403 (44%), Positives = 249/403 (61%), Gaps = 23/403 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LP+LQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCMGCAKTGSGKTAAFVLPVLQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L +PH+VVATPGRL DH+ ++ FSL +++L++D
Sbjct: 93 LGKPLGLKDCIIVGGMDMVTQALELSNQPHVVVATPGRLADHIRSSSTFSLAKIQFLIMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF K L+ IL +P RQT LFSAT+T +++L+ + P E+ S+
Sbjct: 153 EADRLLEQGCTDFTKDLETILTAVPAKRQTLLFSATLTDTLQELKHIAMNKPFFWESKSE 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSAS----STMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y P K KD YLV+++ + S ++FT TC ++L +ML+
Sbjct: 213 TRTVEELDQRYILTPEKVKDAYLVHLIQTFTDQHDDWSIIIFTSTCKDCQILTMMLQKFH 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
I + M Q +R L KFKA ILI TDVA+RGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTISLHSMMKQKQRFANLAKFKASVYKILIATDVAARGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR GV+I+LV QY++ IE+ I KL EFP EE+EVL +L +V +
Sbjct: 333 IHRVGRTARAGRNGVSITLVTQYDIHLVHSIEEQIQTKLKEFPVEEKEVLKILTQVNVTR 392
Query: 362 RISQMTIKDSG-------NKRRR---KGGDEDDDIGRQFGINK 394
R ++ ++ + NKR++ +G D D + R+ + K
Sbjct: 393 RECEIRLESTDFDEKKEINKRKQLILEGKDPDLEAKRKAELEK 435
>gi|356528665|ref|XP_003532920.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Glycine
max]
Length = 587
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 179/375 (47%), Positives = 245/375 (65%), Gaps = 11/375 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+ ++G+ +TGSGKT AFALPIL L AE+ V FA V++PTRELA Q++EQF A
Sbjct: 99 GRHVLGIDETGSGKTAAFALPILHRL---AEHPFGV---FALVVTPTRELAFQLAEQFRA 152
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLV 126
LGS + LR V+VGG+DM++QT L RPH+V+ATPGR+ L N K+LV
Sbjct: 153 LGSAVHLRITVVVGGMDMLRQTKELAARPHLVIATPGRIHALLRNNPDIPPVFSRTKFLV 212
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
LDEADR+L+ F++ L I +P RQ FSAT T ++KL+ EA +
Sbjct: 213 LDEADRVLDVGFQEELRFIFQCLPENRQNLFFSATTTSNLQKLRERYQDKMYVYEAYEGF 272
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILT---EVSASSTMVFTRTCDATRLLALMLRNLGQR 243
TV+TLKQQ F+P K KD YL++IL ++ S +VF TC L+LML L Q
Sbjct: 273 KTVETLKQQAIFIPKKVKDVYLMHILAKMEDMGIRSAIVFISTCRDCHRLSLMLEVLDQE 332
Query: 244 AIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIH 303
A + SQ++RL AL++FK+G+ +IL+ TDVASRGLDIP+VD+VINYD+P +DYIH
Sbjct: 333 AAALYSFKSQAQRLEALHQFKSGKVSILLATDVASRGLDIPTVDLVINYDVPRFPRDYIH 392
Query: 304 RVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRI 363
RVGRTARAGR G+A+SLV Q +++ +IE LI K+L +E EVL L+++V AK +
Sbjct: 393 RVGRTARAGRGGLALSLVTQNDVDLIHEIEALIEKQLEMIEYKENEVLSLMKKVFSAKNV 452
Query: 364 SQMTIKDSGNKRRRK 378
++M + D G + + K
Sbjct: 453 AEMKMIDDGFEEKAK 467
>gi|332253514|ref|XP_003275885.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Nomascus
leucogenys]
Length = 483
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 185/410 (45%), Positives = 250/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPYG------IFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LV+D
Sbjct: 93 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +++LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
STV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 213 VSTVEQLDQRYLLVPEKVKDAYLVHLIQCFQDEHEDWSIIIFTNTCKTCQILCMMLRKFS 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I KKL EF EE +VL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFSVEEAKVLQILTQVNVVR 392
Query: 362 RISQMTI-------KDSGNKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ + K NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEAAHFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|444726610|gb|ELW67134.1| putative ATP-dependent RNA helicase DDX49 [Tupaia chinensis]
Length = 479
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 184/410 (44%), Positives = 249/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LV+D
Sbjct: 93 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKRIRFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +++LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTADLEVILAAVPTRRQTLLFSATLTDTLRELQGLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y VP + KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 213 VRTVEQLDQRYLLVPERVKDAYLVHLVQTFQDEHEDWSIIIFTNTCKTCQILCMMLRKFN 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I KKL EF EE EVL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVR 392
Query: 362 RISQMTI-------KDSGNKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ + K NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEAANFDEKKEVNKRKQLILEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|15219185|ref|NP_173078.1| DEAD-box ATP-dependent RNA helicase 36 [Arabidopsis thaliana]
gi|75336890|sp|Q9SA27.1|RH36_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 36
gi|4966350|gb|AAD34681.1|AC006341_9 Similar to gb|L13612 DEAD-box protein (dbp45A) from Drosophila
melanogaster and is a member of PF|00270 DEAD/DEAH box
helicase family [Arabidopsis thaliana]
gi|332191310|gb|AEE29431.1| DEAD-box ATP-dependent RNA helicase 36 [Arabidopsis thaliana]
Length = 491
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 178/370 (48%), Positives = 246/370 (66%), Gaps = 11/370 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D++GLAQTGSGKT AFALPIL L AE+ V FA V++PTRELA Q++EQF+
Sbjct: 94 AGRDVLGLAQTGSGKTAAFALPILHRL---AEDPYGV---FALVVTPTRELAFQLAEQFK 147
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYL 125
ALGS ++LRC+V+VGG+DM+ QT++L RPHIV+ TPGR+ L N K+L
Sbjct: 148 ALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIVITTPGRIKVLLENNPDVPPVFSRTKFL 207
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F+ L I +P+ RQT LFSATMT ++ L EA
Sbjct: 208 VLDEADRVLDVGFQDELRTIFQCLPKSRQTLLFSATMTSNLQALLEHSSNKAYFYEAYEG 267
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSAS---STMVFTRTCDATRLLALMLRNLGQ 242
TVDTL QQ+ F K+ YLV+IL+++ S M+F TC + L+LML L
Sbjct: 268 LKTVDTLTQQFIFEDKDAKELYLVHILSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEV 327
Query: 243 RAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYI 302
I + SQS RL AL+KFK+G+ IL+ TDVASRGLDIP+VD+VINYDIP + +DY+
Sbjct: 328 ENIAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYV 387
Query: 303 HRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
HRVGRTARAGR G+A+S++ + +++ +IE+ +GKK+ + + L + +V++AKR
Sbjct: 388 HRVGRTARAGRGGLAVSIITETDVKLIHKIEEEVGKKMEPYNKKVITDSLEVTKVSKAKR 447
Query: 363 ISQMTIKDSG 372
++ M + D+G
Sbjct: 448 VAMMKMLDNG 457
>gi|158257264|dbj|BAF84605.1| unnamed protein product [Homo sapiens]
Length = 483
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 185/410 (45%), Positives = 249/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPYG------IFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++V G+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LV+D
Sbjct: 93 LGKPLGLKDCIIVDGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +++LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
STV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 213 VSTVEQLDQRYLLVPEKVKDAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFS 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I KKL EF EE EVL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVR 392
Query: 362 RISQMTI-------KDSGNKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ + K NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEAAHFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|410950898|ref|XP_003982139.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Felis catus]
Length = 483
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 183/410 (44%), Positives = 250/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LV+D
Sbjct: 93 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +++LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTADLETILAAVPTRRQTLLFSATLTDTLRELQGLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 213 VRTVEQLDQRYLLVPEKVKDAYLVHLIQNFQDEHEDWSIIIFTNTCKTCQILCMMLRKFN 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I KKL EF EE +VL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFSVEEAKVLQILTQVNVVR 392
Query: 362 RISQMTIKDSG-------NKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ ++ + NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEAANFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|45361669|ref|NP_989409.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Xenopus (Silurana)
tropicalis]
gi|40787696|gb|AAH64887.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Xenopus (Silurana)
tropicalis]
Length = 479
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 179/398 (44%), Positives = 247/398 (62%), Gaps = 23/398 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCMGCAKTGSGKTAAFVLPILQKLSE------DPFGIFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DH+ ++ FS+ +++LVLD
Sbjct: 93 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHIRSSNTFSIKKIRFLVLD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF + L IL +P RQT LFSAT+T +++L+ + P E+ S+
Sbjct: 153 EADRLLEQGCTDFTQDLQVILEAVPAQRQTLLFSATLTDTLQELKTIAMNKPFFWESTSE 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y VP K KD YLV+++ E S M+FT TC ++L +MLR
Sbjct: 213 VRTVEQLDQRYILVPEKVKDAYLVHLIQKFQDEHEDWSIMIFTNTCKTCQILNMMLREFS 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
++ + M Q +R AL KFK+ ILI TDVA+RGLDIP+V +VIN++ P K Y
Sbjct: 273 FPSVALHSMMKQKQRFAALAKFKSSVFKILIATDVAARGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G+AI+LV QY++ IE+ I KL EF +E EVL +L +V +
Sbjct: 333 IHRVGRTARAGRNGMAITLVTQYDIHLVHAIEEQINMKLEEFKVKESEVLKILTQVNVTR 392
Query: 362 RISQMTI-------KDSGNKRRR---KGGDEDDDIGRQ 389
R ++ + K NKR++ +G D D + R+
Sbjct: 393 RECEIKLECTDFDEKKEINKRKQLILEGKDPDLEAKRK 430
>gi|359494643|ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Vitis
vinifera]
gi|297736137|emb|CBI24175.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 327 bits (839), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 180/377 (47%), Positives = 251/377 (66%), Gaps = 11/377 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG D++GLAQTGSGKT AFALPIL L AE+ V FA V++PTRELA Q++EQF
Sbjct: 87 AGDDVLGLAQTGSGKTAAFALPILHRL---AEDPFGV---FALVVTPTRELAYQLAEQFR 140
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYL 125
ALGS + LRCAV+VGG+DM+ Q L +RPH+V+ATPGR+ L K+L
Sbjct: 141 ALGSCLHLRCAVVVGGMDMINQAQTLMQRPHVVIATPGRVKVLLEQNPDIPAVFARTKFL 200
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ FE+ L + +P+ RQT LFSATMT ++ L EA
Sbjct: 201 VLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSATMTSDLQTLLELSSNKAYFYEAYEG 260
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT---EVSASSTMVFTRTCDATRLLALMLRNLGQ 242
+ TV++LKQQY FVP KD YL++IL+ E+ S ++F TC + LL+L+L L
Sbjct: 261 FKTVESLKQQYIFVPKNVKDVYLLHILSKMEEMGIRSAIIFVSTCRSCHLLSLLLEELDL 320
Query: 243 RAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYI 302
+ SQS RL A+++FK+G+ IL+ TDVASRGLDIP+VD+V+NYDIP +DY+
Sbjct: 321 EVAALHSFKSQSLRLAAVHRFKSGQVPILLATDVASRGLDIPTVDLVVNYDIPRYPRDYV 380
Query: 303 HRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
HRVGRTARAGR G+++S+V Q +++ +IE ++GK+L +F +E+EVL + +V +A+R
Sbjct: 381 HRVGRTARAGRGGLSLSIVTQNDVDLIHEIEAVLGKQLDKFDCKEKEVLDNITKVYKARR 440
Query: 363 ISQMTIKDSGNKRRRKG 379
++ M + D G + + K
Sbjct: 441 VATMKMMDDGFEEKAKA 457
>gi|346466157|gb|AEO32923.1| hypothetical protein [Amblyomma maculatum]
Length = 487
Score = 327 bits (838), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 171/373 (45%), Positives = 241/373 (64%), Gaps = 10/373 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD IG A+TGSGKT AFALPILQ L E FA +L+PTRELA QISEQF+
Sbjct: 67 GKDCIGCAKTGSGKTLAFALPILQKLFEDPY------GIFALILTPTRELAFQISEQFKV 120
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+G LR V+VGG+DM+ Q L + PH+VVATPGRL DHL + F+L +++LVLD
Sbjct: 121 VGKAAGLRDCVIVGGMDMVTQGQILAESPHVVVATPGRLADHLESCNTFTLKRIRFLVLD 180
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL F + L I +P+ RQT LFSAT+T +++L+ + +P A S T
Sbjct: 181 EADRLLEGHFNEQLKTIFAALPKKRQTLLFSATITATLEELRNIAMTDPFFYTAPSDVVT 240
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTE----VSASSTMVFTRTCDATRLLALMLRNLGQRA 244
V+ L Q+Y P ++ YLV+IL + + S ++FT TC ++L++ L++LG
Sbjct: 241 VEELDQRYVLTPVSVREAYLVHILHKFLDSMPKGSVIIFTGTCKGCQVLSIALKSLGFPN 300
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
P+ M Q RL +L+ FK+ +L+ TDVASRGLDIPSV++V+N+++P+ KDY+HR
Sbjct: 301 APLHSQMPQRVRLASLSTFKSNTTRVLVATDVASRGLDIPSVELVLNHNVPSAPKDYVHR 360
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRIS 364
VGRTARAGR G AI+LV Q+++ IE+LI KL P +E EVL +L +V+ A R +
Sbjct: 361 VGRTARAGRGGKAITLVTQHDVHLVTAIEELIKTKLVLQPTKEPEVLKILTQVSVALREA 420
Query: 365 QMTIKDSGNKRRR 377
++ + + + R+
Sbjct: 421 EIRLDEQDFEERK 433
>gi|307167913|gb|EFN61290.1| Probable ATP-dependent RNA helicase DDX49 [Camponotus floridanus]
Length = 457
Score = 327 bits (838), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 181/394 (45%), Positives = 255/394 (64%), Gaps = 24/394 (6%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D IG A+TGSGKT AFALPILQ L E FA VL+PTRELA QI++QF
Sbjct: 41 AGEDCIGCAKTGSGKTLAFALPILQKLCEDPY------GIFALVLTPTRELAFQIADQFA 94
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
A+G I+L+ V+VGG+DMM Q L L KRPHIVVATPGRL DHL + FSL +K+LVL
Sbjct: 95 AIGKAINLKKCVVVGGMDMMVQGLELSKRPHIVVATPGRLADHLDSCDTFSLQKIKFLVL 154
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKI---EAAS 184
DEADRLL F+K L +I +P+ +Q LFSATMT + K+++ + V I E +
Sbjct: 155 DEADRLLGGHFDKQLKKIFAAVPKQKQVLLFSATMTDALDKVKQIA-SSKVFIWEEEDDA 213
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSAS----STMVFTRTCDATRLLALMLRNL 240
+TV L Q+Y P D +LV ++ A+ S M+FT TC +LL++ML ++
Sbjct: 214 GIATVRELDQRYVLCPKDVLDSFLVEVIRTFRATNKNGSIMIFTDTCKHCQLLSMMLNDV 273
Query: 241 GQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKD 300
G + + + Q +RL AL+KFK+ ILI TDVA+RGLDIP+V++V+N+ IP K+
Sbjct: 274 GFTNMALHAMIKQKERLAALSKFKSNHVQILIATDVAARGLDIPTVELVVNHIIPNVPKE 333
Query: 301 YIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
YIHRVGRTARAGR G+AISL+ +++ IE IG KL E+ +++E++ +L +++ A
Sbjct: 334 YIHRVGRTARAGRNGMAISLITPNDIKLLHMIEDTIGTKLTEYKVDDKEIVTILTQISVA 393
Query: 361 KRISQMTIKDSG-------NKRRR---KGGDEDD 384
KR +++ + ++ NKR++ +G D D+
Sbjct: 394 KREAEIRLDETDFYEKKMINKRKKLILEGKDPDE 427
>gi|302835956|ref|XP_002949539.1| hypothetical protein VOLCADRAFT_42311 [Volvox carteri f.
nagariensis]
gi|300265366|gb|EFJ49558.1| hypothetical protein VOLCADRAFT_42311 [Volvox carteri f.
nagariensis]
Length = 423
Score = 327 bits (838), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 177/349 (50%), Positives = 236/349 (67%), Gaps = 12/349 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLAQTGSGKT AFALPILQ L A++ V FA VL+PTRELA QI EQF A
Sbjct: 75 GRDVIGLAQTGSGKTAAFALPILQVL---AKDPYGV---FALVLTPTRELAAQICEQFRA 128
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGT--LKYLV 126
LG+G+ L+ V++GGVDM Q L +RPH+VVATPGRL L G S G ++LV
Sbjct: 129 LGAGMRLKELVIIGGVDMQHQARELARRPHVVVATPGRLRGLLDADGGLSAGLSRTRFLV 188
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
LDEADR+L+ FE L + + + RQT LFSATMT+ + LQ+A L++ +A
Sbjct: 189 LDEADRVLDPTFEDDLRYVRFCLRQDRQTLLFSATMTRSLIALQKASLQDAHVFQAYEGL 248
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSAS----STMVFTRTCDATRLLALMLRNLGQ 242
T D L+++Y F+PAK K+ YL Y+LT V + S ++F TC LL+++L LG
Sbjct: 249 RTADRLREEYLFLPAKVKEVYLHYLLTVVVPARKVRSAIIFCSTCRGCHLLSVLLEELGL 308
Query: 243 RAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYI 302
A + SQ RL AL +FK+ + +L+ TDVASRGLDIP+VD+V+NYD+P ++DY+
Sbjct: 309 PAAALHSGKSQKARLSALARFKSEQVPLLLATDVASRGLDIPTVDLVVNYDLPVLARDYV 368
Query: 303 HRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 351
HRVGRTARAGR+G ++SLV QY+++ IE+LIG KL E +E+EVL
Sbjct: 369 HRVGRTARAGRSGWSLSLVTQYDVQLVHAIEELIGHKLDEHKLDEDEVL 417
>gi|449525593|ref|XP_004169801.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like, partial
[Cucumis sativus]
Length = 224
Score = 327 bits (837), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 152/177 (85%), Positives = 169/177 (95%)
Query: 195 QYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQS 254
QY F+PAKYK+CYLVYILTE+S S++MVFTRTCDATRLL+L+LRNLG RAIPISG M+Q+
Sbjct: 1 QYCFIPAKYKECYLVYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQA 60
Query: 255 KRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRT 314
KRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP+NSKDYIHRVGRTARAGR+
Sbjct: 61 KRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRS 120
Query: 315 GVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDS 371
GVAISLVNQYELEWY+QIEKLIGKKLP+F A+EEEVL+LLERV EAKRIS M IK++
Sbjct: 121 GVAISLVNQYELEWYIQIEKLIGKKLPQFSAQEEEVLMLLERVAEAKRISLMKIKET 177
>gi|109124055|ref|XP_001115617.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Macaca
mulatta]
Length = 527
Score = 327 bits (837), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 183/398 (45%), Positives = 245/398 (61%), Gaps = 23/398 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPYG------IFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LV+D
Sbjct: 93 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +++LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
STV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 213 VSTVEQLDQRYLLVPEKVKDAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFS 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I KKL EF EE EVL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVR 392
Query: 362 RISQMTI-------KDSGNKRRR---KGGDEDDDIGRQ 389
R ++ + K NKR++ +G D D + R+
Sbjct: 393 RECEIKLEAAHFDEKKEINKRKQLILEGKDPDLEAKRK 430
>gi|47217410|emb|CAG00770.1| unnamed protein product [Tetraodon nigroviridis]
Length = 456
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 177/403 (43%), Positives = 248/403 (61%), Gaps = 23/403 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LP+LQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCMGCAKTGSGKTAAFVLPVLQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + LR ++VGG+DM+ Q L +PH+VVATPGRL DH+ ++ FS+ +++L++D
Sbjct: 93 LGKPLGLRDCIVVGGMDMVSQASELSNQPHVVVATPGRLADHIRSSSTFSMSKIQFLIMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF K L+ I+ +P RQT LFSAT+T +++L+ + P E+ S+
Sbjct: 153 EADRLLEQGCTDFTKDLETIMPALPAKRQTLLFSATLTDTLQELKNIAMNKPFFWESKSE 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSAS----STMVFTRTCDATRLLALMLRNLG 241
TVD L Q+Y P K KD YLV+++ + S ++FT TC ++L +ML+
Sbjct: 213 TRTVDELDQRYILTPEKVKDAYLVHLIQTFTDQHDDWSIIIFTNTCKNCQILTMMLQQFN 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
I + M Q +R L KFKA ILI TDVA+RGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTISLHSMMKQKQRFANLAKFKASVYKILIATDVAARGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR GV+I+LV QY++ IE+ I KL EFP EE+EVL +L +V +
Sbjct: 333 IHRVGRTARAGRNGVSITLVTQYDIHLVHSIEEQIQTKLKEFPVEEKEVLKILTQVNVTR 392
Query: 362 RISQMTIKDSG-------NKRRR---KGGDEDDDIGRQFGINK 394
R ++ ++ + NKR++ +G D D + R+ + K
Sbjct: 393 RECEIRLESTDFDEKKEINKRKQLILEGKDPDLEAKRKAELEK 435
>gi|297850038|ref|XP_002892900.1| hypothetical protein ARALYDRAFT_471825 [Arabidopsis lyrata subsp.
lyrata]
gi|297338742|gb|EFH69159.1| hypothetical protein ARALYDRAFT_471825 [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 178/370 (48%), Positives = 245/370 (66%), Gaps = 11/370 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D++GLAQTGSGKT AFALPIL L AE+ V FA V++PTRELA Q++EQF+
Sbjct: 90 AGRDVLGLAQTGSGKTAAFALPILHRL---AEDPYGV---FALVVTPTRELAFQLAEQFK 143
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYL 125
ALGS ++LRC+V+VGG+DM+ QT +L RPHIV+ TPGR+ L N K+L
Sbjct: 144 ALGSCLNLRCSVIVGGMDMLTQTRSLVSRPHIVITTPGRIKVLLENNPDVPPVFSRTKFL 203
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F+ L I +P+ RQT LFSATMT ++ L EA
Sbjct: 204 VLDEADRVLDVGFQDELRTIFQCLPKSRQTLLFSATMTSNLQTLLEHSSNKAYFYEAYEG 263
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSAS---STMVFTRTCDATRLLALMLRNLGQ 242
TVDTL QQ+ F K+ YLV+IL+++ S M+F TC + L+LML L
Sbjct: 264 LKTVDTLTQQFIFEDKDAKELYLVHILSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEV 323
Query: 243 RAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYI 302
+ + SQS RL AL+KFK+G+ IL+ TDVASRGLDIP+VD+VINYDIP N +DY+
Sbjct: 324 ENVAMHSLNSQSMRLSALSKFKSGKIPILLATDVASRGLDIPTVDLVINYDIPRNPRDYV 383
Query: 303 HRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
HRVGRTARAGR G+A+S++ + +++ +IE+ +GKK+ + + L + +V++AKR
Sbjct: 384 HRVGRTARAGRGGLAVSIITETDVKLIHKIEEEVGKKMEPYNNKIITDSLEVTKVSKAKR 443
Query: 363 ISQMTIKDSG 372
++ M + D+G
Sbjct: 444 VAMMRMLDNG 453
>gi|355683302|gb|AER97082.1| DEAD box polypeptide 49 [Mustela putorius furo]
Length = 469
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/410 (44%), Positives = 249/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 27 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 80
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LV+D
Sbjct: 81 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMD 140
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRL+ DF L+ IL +P RQT LFSAT+T +++LQ P EA +
Sbjct: 141 EADRLVEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAP 200
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 201 VRTVEQLDQRYLLVPEKVKDAYLVHLIQNFQDEHEDWSIIIFTNTCKTCQILCMMLRKFN 260
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 261 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 320
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I KKL EF EE VL +L +V +
Sbjct: 321 IHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFSVEEASVLQILTQVNVVR 380
Query: 362 RISQMTIKDSG-------NKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ ++ + NKR++ +G D D + R+ + K K R+
Sbjct: 381 RECEIKLEAANFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKNRR 430
>gi|348558702|ref|XP_003465155.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Cavia
porcellus]
Length = 477
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/410 (44%), Positives = 247/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ F + +++LV+D
Sbjct: 93 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFHIKKIRFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +++LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTADLETILAAVPAQRQTLLFSATLTDTLRELQGLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSAS----STMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y VP K KD YLV+++ S ++FT TC ++L +MLR
Sbjct: 213 VRTVEQLDQRYLLVPEKVKDAYLVHLVQSFQDKHEDWSIIIFTNTCKTCQILCMMLRKFN 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFSALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I K+L E P EE EVL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKQLEELPVEEAEVLQILTQVNVVR 392
Query: 362 RISQMTI-------KDSGNKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ + K NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEAAHFDEKKEINKRKQLILEGRDPDLEAKRRAELAKIKQKNRR 442
>gi|147772471|emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera]
Length = 592
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 180/377 (47%), Positives = 251/377 (66%), Gaps = 11/377 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG D++GLAQTGSGKT AFALPIL L AE+ V FA V++PTRELA Q++EQF
Sbjct: 190 AGDDVLGLAQTGSGKTAAFALPILHRL---AEDPFGV---FALVVTPTRELAYQLAEQFR 243
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYL 125
ALGS + LRCAV+VGG+DM+ Q L +RPH+V+ATPGR+ L K+L
Sbjct: 244 ALGSCLHLRCAVVVGGMDMINQAQTLMQRPHVVIATPGRVKVLLEQNPDIPAVFARTKFL 303
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ FE+ L + +P+ RQT LFSATMT ++ L EA
Sbjct: 304 VLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSATMTSDLQTLLELSSNKAYFYEAYEG 363
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT---EVSASSTMVFTRTCDATRLLALMLRNLGQ 242
+ TV++LKQQY FVP KD YL++IL+ E+ S ++F TC + LL+L+L L
Sbjct: 364 FKTVESLKQQYIFVPKNVKDVYLLHILSKMEEMGIRSAIIFVSTCRSCHLLSLLLEELDL 423
Query: 243 RAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYI 302
+ SQS RL A+++FK+G+ IL+ TDVASRGLDIP+VD+V+NYDIP +DY+
Sbjct: 424 EVAALHSFKSQSLRLAAVHRFKSGQVPILLATDVASRGLDIPTVDLVVNYDIPRYPRDYV 483
Query: 303 HRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
HRVGRTARAGR G+++S+V Q +++ +IE ++GK+L +F +E+EVL + +V +A+R
Sbjct: 484 HRVGRTARAGRGGLSLSIVTQNDVDLIHEIEAVLGKQLDKFDCKEKEVLDNITKVYKARR 543
Query: 363 ISQMTIKDSGNKRRRKG 379
++ M + D G + + K
Sbjct: 544 VATMKMMDDGFEEKAKA 560
>gi|345315878|ref|XP_001517019.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like, partial
[Ornithorhynchus anatinus]
Length = 264
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/264 (59%), Positives = 204/264 (77%)
Query: 103 TPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATM 162
TPGRL+DHL NTKGF+L LKYLV+DEADR+LN DFE +D+IL VIPR R+T+LFSATM
Sbjct: 1 TPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATM 60
Query: 163 TKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMV 222
TKKV+KLQRA LK+PVK +SKY TV+ L+Q Y F+P+K+KD YLVY+L E++ +S M+
Sbjct: 61 TKKVQKLQRAALKDPVKCAVSSKYQTVEKLQQYYLFIPSKFKDSYLVYLLNELAGNSFMI 120
Query: 223 FTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLD 282
F TC+ T+ AL+LRNLG AIP+ G MSQ+KRLG+LNKFKA +IL+ TDVASRGLD
Sbjct: 121 FCSTCNNTQRTALLLRNLGFTAIPLHGQMSQNKRLGSLNKFKAKARSILLATDVASRGLD 180
Query: 283 IPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPE 342
IP VD+V+N+DIPT+SK + R R G+ +Y++E + +IE LIGKKLP
Sbjct: 181 IPHVDVVVNFDIPTHSKVRVRGRSRPTERRRGGLPGRPPPRYDVELFQRIEHLIGKKLPA 240
Query: 343 FPAEEEEVLLLLERVTEAKRISQM 366
FP +EEEV++L ERV EA+R ++M
Sbjct: 241 FPTQEEEVMMLTERVAEAQRFARM 264
>gi|384487839|gb|EIE80019.1| hypothetical protein RO3G_04724 [Rhizopus delemar RA 99-880]
Length = 425
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 176/363 (48%), Positives = 238/363 (65%), Gaps = 12/363 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IG A+TGSGKT AFA+PILQ L + FA VL+PTRELA QI+EQF
Sbjct: 67 GKDVIGGAKTGSGKTAAFAIPILQKL------SQDPYGVFALVLTPTRELAYQIAEQFRV 120
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG-FSLGTLKYLVL 127
LG GI ++ V+VGG+DMM Q L L KRPHI++ATPGRL DH+ ++ G +L K+LV+
Sbjct: 121 LGKGIGVKECVVVGGMDMMTQALELAKRPHIIIATPGRLRDHIQSSSGAVNLSRCKFLVM 180
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRA---CLKNPVKIEAAS 184
DEADR+L+ F L+ IL ++P+ RQT LF+ATMT+ + L+ A K P
Sbjct: 181 DEADRMLSSTFVPELETILPLLPKNRQTLLFTATMTESILALKDAEEDPAKRPFVHVCDM 240
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYIL--TEVSASSTMVFTRTCDATRLLALMLRNLGQ 242
STV+TL Q Y FVP++ K YL ++L ++ S ++F C L+ +ML+ LG
Sbjct: 241 SISTVNTLDQFYVFVPSQVKVVYLAHLLRTDDLKERSVIIFCGRCSTAELITVMLKELGI 300
Query: 243 RAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYI 302
R + MSQ +RL +L KF+A ILI TDV SRGLDIPSV+ V+N+DIP + DYI
Sbjct: 301 RCTALHSEMSQQQRLDSLGKFRAEVVKILISTDVGSRGLDIPSVECVLNFDIPRDPTDYI 360
Query: 303 HRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
HRVGRTARAGR G AIS+V + +++ IE+ K++ ++ +E EVL +L VT AKR
Sbjct: 361 HRVGRTARAGRGGKAISIVAEKDIQLIQNIEERTNKQMEKYEVDENEVLDILSDVTAAKR 420
Query: 363 ISQ 365
I++
Sbjct: 421 IAK 423
>gi|432854582|ref|XP_004067972.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Oryzias
latipes]
Length = 469
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/383 (45%), Positives = 240/383 (62%), Gaps = 20/383 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LP+LQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPVLQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L K+PH+VVATPGRL DH+ ++ FS+ +K+L+LD
Sbjct: 93 LGKPLGLKDCIVVGGMDMVTQALELSKQPHVVVATPGRLADHVRSSNTFSMRKIKFLILD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF K L+EIL +P RQT LFSAT+T +++L+ + P E+ S+
Sbjct: 153 EADRLLEQGCTDFTKDLEEILGTLPAKRQTLLFSATLTDTLQELKSIAMNKPFFWESTSE 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSAS----STMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y P K KD YLV+++ + S ++FT TC ++L +MLR
Sbjct: 213 TRTVEELDQRYILTPEKVKDAYLVHLIQTFTDKHDDWSIIIFTNTCKNCQILTMMLREFN 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
I + M Q +R L KFKA ILI TDVA+RGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTISLHSMMKQRQRFANLAKFKASVYKILIATDVAARGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR GV+I+LV QY++ IE+ KL E+P EE+EV +L +V +
Sbjct: 333 IHRVGRTARAGRNGVSITLVTQYDIHLVHSIEEQTKTKLTEYPVEEKEVHKILTQVNVTR 392
Query: 362 RISQMTIKDSG-------NKRRR 377
R ++ ++ + NKR++
Sbjct: 393 RECEIRLESTDFDEKKEINKRKQ 415
>gi|149036001|gb|EDL90667.1| rCG38846 [Rattus norvegicus]
Length = 497
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 180/410 (43%), Positives = 251/410 (61%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ F++ +++LVLD
Sbjct: 93 LGKPLGLKDCIIVGGMDMVTQALELSRKPHVVIATPGRLADHLRSSNTFNMKKIRFLVLD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL+ +P RQT LFSAT+T +K+LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTADLETILSAVPARRQTLLFSATLTDTLKELQGLATNQPFFWEAQAT 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y VP K KD YLV+++ ++ S ++FT TC ++L +MLR
Sbjct: 213 VRTVEQLDQRYLLVPEKVKDAYLVHLVQTFQDQLEDCSIIIFTNTCKTCQILCMMLRKFN 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL +FK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALARFKSSTYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I ++L E EE +VL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLLHAIEEEIKQQLAELAVEEAQVLQILTQVNVVR 392
Query: 362 RISQMTIKDSG-------NKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ ++ S NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEASHFDEKKEINKRKQMILEGKDPDLEAKRKAELAKIKQQNRR 442
>gi|395513190|ref|XP_003760812.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Sarcophilus
harrisii]
Length = 509
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 181/403 (44%), Positives = 248/403 (61%), Gaps = 23/403 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCMGCAKTGSGKTAAFVLPILQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ F++ +++LV+D
Sbjct: 93 LGKPLGLKECIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSSTFNIKKIRFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF K L+ I + P RQT LFSAT+T +K LQ P EA ++
Sbjct: 153 EADRLLEQGCTDFTKDLEVIFDAAPTQRQTLLFSATLTDTLKVLQGIAANRPFFWEAQAE 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y VP K KD YLV+++ E + S ++FT TC ++L +MLR
Sbjct: 213 VRTVEQLDQRYLLVPEKVKDAYLVHLIQTFHDEHADWSIIIFTSTCKTCQILNMMLRKFN 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
++ + M Q R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPSVALHSMMKQKARFAALAKFKSSVYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G+AI+LV QY++ IE+ I KKL +F EE +VL +L +V +
Sbjct: 333 IHRVGRTARAGRHGIAITLVTQYDIHLLHAIEEEIKKKLDDFSVEEAKVLKILTQVNVVR 392
Query: 362 RISQMTI-------KDSGNKRRR---KGGDEDDDIGRQFGINK 394
R ++ + K NKR++ +G D D + R+ + K
Sbjct: 393 RECEIKLEATDFDEKKEINKRKQLILEGKDPDLEAKRKAELAK 435
>gi|67972435|ref|NP_001020093.2| probable ATP-dependent RNA helicase DDX49 [Mus musculus]
gi|76364172|sp|Q4FZF3.1|DDX49_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX49; AltName:
Full=DEAD box protein 49
gi|71051022|gb|AAH99554.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Mus musculus]
Length = 480
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 181/410 (44%), Positives = 250/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ F++ +++LV+D
Sbjct: 93 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFNMKKIQFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +K+LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTTDLETILAAVPARRQTLLFSATLTDTLKELQGLATNEPFFWEAQAT 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y VP K KD YLV+++ ++ S ++FT TC ++L +MLR
Sbjct: 213 VRTVEQLDQRYLLVPEKVKDAYLVHLVQTFQDQLEDCSIIIFTNTCKTCQILCMMLRKFN 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I ++L E EE EVL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLLHAIEEQIKQQLAELVVEEAEVLQILTQVNVVR 392
Query: 362 RISQMTIKDSG-------NKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ ++ S NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEASHFDEKKEINKRKQMILEGKDPDLEAKRKAELAKIKQQNRR 442
>gi|348523239|ref|XP_003449131.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Oreochromis
niloticus]
Length = 480
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 171/377 (45%), Positives = 239/377 (63%), Gaps = 13/377 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LP+LQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCMGCAKTGSGKTAAFVLPVLQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L +PH+VVATPGRL DH+ ++ FS+ +++L+LD
Sbjct: 93 LGKPLGLKDCIIVGGMDMVTQALELSNQPHVVVATPGRLADHIRSSNTFSMKRIQFLILD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF K L+ IL ++P RQT LFSAT+T +++L+ + P E+ S+
Sbjct: 153 EADRLLEQGCTDFTKDLEVILEILPAKRQTLLFSATLTDTLQELKSIAMNKPFFWESKSE 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y P K KD YLV+++ E S ++FT TC + ++L +MLR
Sbjct: 213 TRTVEELDQRYILTPEKVKDAYLVHLIQTFTDEHDDWSIIIFTNTCKSCQILTMMLREFN 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
I + M Q +R L KFKA ILI TDVA+RGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTISLHSMMKQKQRFANLAKFKASVYKILIATDVAARGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR GV+I+LV QY++ IE+ I KL E+P E+EVL +L +V +
Sbjct: 333 IHRVGRTARAGRNGVSITLVTQYDIHLIHSIEEQIQTKLKEYPVVEKEVLKILTQVNVTR 392
Query: 362 RISQMTIKDSGNKRRRK 378
R ++ ++ + +R+
Sbjct: 393 RECEIKLESTDFDEKRE 409
>gi|281343550|gb|EFB19134.1| hypothetical protein PANDA_000569 [Ailuropoda melanoleuca]
Length = 457
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 182/410 (44%), Positives = 249/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LV+D
Sbjct: 93 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +++LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTVDLEAILAAVPTRRQTLLFSATLTDTLRELQGLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 213 VRTVEQLDQRYLLVPEKVKDAYLVHLIQNFQDEHEDWSIIIFTNTCKTCQILCMMLRKFN 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I KKL E EE +VL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEELSVEEAKVLQILTQVNVVR 392
Query: 362 RISQMTIKDSG-------NKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ ++ + NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEAANFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|301753949|ref|XP_002912858.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like
[Ailuropoda melanoleuca]
Length = 477
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 182/410 (44%), Positives = 249/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LV+D
Sbjct: 93 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +++LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTVDLEAILAAVPTRRQTLLFSATLTDTLRELQGLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 213 VRTVEQLDQRYLLVPEKVKDAYLVHLIQNFQDEHEDWSIIIFTNTCKTCQILCMMLRKFN 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I KKL E EE +VL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEELSVEEAKVLQILTQVNVVR 392
Query: 362 RISQMTIKDSG-------NKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ ++ + NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEAANFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|57101724|ref|XP_541930.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 isoform 1
[Canis lupus familiaris]
Length = 488
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 182/410 (44%), Positives = 249/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LV+D
Sbjct: 93 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +K+LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTVDLEAILAAVPTRRQTLLFSATLTDTLKELQGLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 213 VRTVEQLDQRYLLVPEKVKDAYLVHLIQNFQDEHEDWSIIIFTNTCKTCQILCMMLRKFN 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I K+L E EE +VL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKQLEELSVEEAKVLQILTQVNVVR 392
Query: 362 RISQMTIKDSG-------NKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ ++ + NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEAANFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|148696858|gb|EDL28805.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Mus musculus]
Length = 545
Score = 324 bits (831), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 181/410 (44%), Positives = 250/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 43 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 96
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ F++ +++LV+D
Sbjct: 97 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFNMKKIQFLVMD 156
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +K+LQ P EA +
Sbjct: 157 EADRLLEQGCTDFTTDLETILAAVPARRQTLLFSATLTDTLKELQGLATNEPFFWEAQAT 216
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y VP K KD YLV+++ ++ S ++FT TC ++L +MLR
Sbjct: 217 VRTVEQLDQRYLLVPEKVKDAYLVHLVQTFQDQLEDCSIIIFTNTCKTCQILCMMLRKFN 276
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 277 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 336
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I ++L E EE EVL +L +V +
Sbjct: 337 IHRVGRTARAGRQGQAITLVTQYDIHLLHAIEEQIKQQLAELVVEEAEVLQILTQVNVVR 396
Query: 362 RISQMTIKDSG-------NKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ ++ S NKR++ +G D D + R+ + K K R+
Sbjct: 397 RECEIKLEASHFDEKKEINKRKQMILEGKDPDLEAKRKAELAKIKQQNRR 446
>gi|169234830|ref|NP_001108495.1| probable ATP-dependent RNA helicase DDX49 [Rattus norvegicus]
gi|165971701|gb|AAI58856.1| Ddx49 protein [Rattus norvegicus]
Length = 480
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 179/410 (43%), Positives = 250/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ F++ +++LVLD
Sbjct: 93 LGKPLGLKDCIIVGGMDMVTQALELSRKPHVVIATPGRLADHLRSSNTFNMKKIRFLVLD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL+ +P RQT LFSAT+T +K+LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTADLETILSAVPARRQTLLFSATLTDTLKELQGLATNQPFFWEAQAT 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
V+ L Q+Y VP K KD YLV+++ ++ S ++FT TC ++L +MLR
Sbjct: 213 VRMVEQLDQRYLLVPEKVKDAYLVHLVQTFQDQLEDCSIIIFTNTCKTCQILCMMLRKFN 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL +FK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALARFKSSTYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I ++L E EE +VL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLLHAIEEEIKQQLAELAVEEAQVLQILTQVNVVR 392
Query: 362 RISQMTIKDSG-------NKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ ++ S NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEASHFDEKKEINKRKQMILEGKDPDLEAKRKAELAKIKQQNRR 442
>gi|357451623|ref|XP_003596088.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355485136|gb|AES66339.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 513
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 178/376 (47%), Positives = 243/376 (64%), Gaps = 11/376 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+ +IG+ QTGSGKT AFALPILQ L AE+ V FA V++PTRELA Q++EQF
Sbjct: 88 AGRHVIGIDQTGSGKTAAFALPILQRL---AEHTFGV---FALVVTPTRELAFQLAEQFR 141
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYL 125
ALGS + LR AV+VGG+DM++QT L RPH+V+ATPGR+ L + + K+L
Sbjct: 142 ALGSSLRLRIAVVVGGMDMLRQTKELVARPHLVIATPGRIKVLLKDNPEIAPVFARTKFL 201
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F+ L I +P RQ FSAT T ++KL+ EA
Sbjct: 202 VLDEADRVLDVGFQDELKFIFQCLPENRQNLFFSATTTSNLQKLRERYQDKLYAFEAYEG 261
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT---EVSASSTMVFTRTCDATRLLALMLRNLGQ 242
+ TV+ LKQQ F+P KD YL++IL+ ++ S +VF TC L LML L Q
Sbjct: 262 FKTVENLKQQVVFIPKNVKDVYLLHILSKMEDMGIRSAIVFVSTCRDCHRLNLMLEVLDQ 321
Query: 243 RAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYI 302
A + SQ++RL AL+ FK+G+ +L+ TDVA RGLDIP+VD+VINYD+P +DYI
Sbjct: 322 EAAALYSFRSQAQRLEALHDFKSGKVPVLLATDVAGRGLDIPTVDLVINYDVPRFPRDYI 381
Query: 303 HRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
HRVGRTARAGR G+A+SLV Q +++ +IE LI ++L +E EVL L+++V AK
Sbjct: 382 HRVGRTARAGRGGLALSLVTQNDVDLIREIETLIERQLEMIEYKENEVLSLMKKVFSAKN 441
Query: 363 ISQMTIKDSGNKRRRK 378
+++M + D G + + K
Sbjct: 442 VAKMKMMDDGFEEKAK 457
>gi|71896415|ref|NP_001026109.1| probable ATP-dependent RNA helicase DDX49 [Gallus gallus]
gi|53130312|emb|CAG31485.1| hypothetical protein RCJMB04_6o15 [Gallus gallus]
Length = 402
Score = 323 bits (828), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 174/361 (48%), Positives = 230/361 (63%), Gaps = 13/361 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LP+LQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPVLQVLSEDPYG------IFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ V+VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FSL LK+LVLD
Sbjct: 93 LGKPLGLKDCVVVGGLDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSLKKLKFLVLD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T + +L+ + P EAAS+
Sbjct: 153 EADRLLEQGCADFIADLEVILEAVPARRQTLLFSATLTDTLNELKSLAMNRPFFWEAASE 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TVD L Q+Y VP KD YLV+++ E S ++FT+TC ++L +MLR
Sbjct: 213 VRTVDELDQRYLLVPEAVKDAYLVHLIQTFQDEHEDWSIIIFTKTCKECQILNMMLRKFS 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
++ + M Q +R AL KFK+ ILI TDVA+RGLDIP+V +VIN++ P K Y
Sbjct: 273 FPSVALHSMMKQRQRFAALAKFKSSIFKILIATDVAARGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G++I++V QY++ IE+ I KL EF EE+ VL +L V +
Sbjct: 333 IHRVGRTARAGRNGISITMVTQYDIHLVHAIEEEIKLKLQEFSVEEKLVLDILTHVNVTR 392
Query: 362 R 362
R
Sbjct: 393 R 393
>gi|255544594|ref|XP_002513358.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223547266|gb|EEF48761.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 502
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/369 (48%), Positives = 241/369 (65%), Gaps = 11/369 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++GLAQTGSGKT FALPIL L AE+ + FA V++PTRELA Q++EQF A
Sbjct: 100 GKDVLGLAQTGSGKTATFALPILHRL---AEDPYGI---FALVITPTRELAYQLAEQFRA 153
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLV 126
LGS ++LRCAV+VGG+D + Q L RPH+V+ATPGR+ L + K+LV
Sbjct: 154 LGSCLNLRCAVVVGGMDKLTQAKTLMARPHVVIATPGRVKVLLEDNPDIPSVFSKTKFLV 213
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
LDEADR+L+ FE L + +P+ RQT LFSATMT ++ L EA +
Sbjct: 214 LDEADRVLDVGFEDELRVVFQCLPKNRQTLLFSATMTSNLESLLEVSANKAYFYEAYEGF 273
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILT---EVSASSTMVFTRTCDATRLLALMLRNLGQR 243
TVDTLKQQY VP KD YLVYIL+ ++ S ++F TC LL+L+L L +
Sbjct: 274 KTVDTLKQQYVLVPKNVKDVYLVYILSKMEDMGIRSAIIFVSTCRTCYLLSLLLEELEKE 333
Query: 244 AIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIH 303
+ SQS RL AL +FK+G+ +ILI TDVASRGLDIP+VD+V+NYD+P +DY+H
Sbjct: 334 PAALHSFKSQSLRLSALRRFKSGQASILIATDVASRGLDIPTVDLVVNYDLPRYPRDYVH 393
Query: 304 RVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRI 363
RVGRTARAGR G+A+S ++Q + +IE ++GK+L EF +E EVL + ++ +A+ +
Sbjct: 394 RVGRTARAGRGGLAMSFISQNDFVLIREIEAVLGKQLGEFECKENEVLSDITKIFKARHV 453
Query: 364 SQMTIKDSG 372
+ M + D G
Sbjct: 454 ATMKMLDDG 462
>gi|126323567|ref|XP_001370574.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Monodelphis
domestica]
Length = 491
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 181/410 (44%), Positives = 248/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCMGCAKTGSGKTAAFVLPILQKLSEDPF------GIFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ F++ +++LV+D
Sbjct: 93 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFNIKKIRFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF K L+ I + P RQT LFSAT+T +K LQ P EA ++
Sbjct: 153 EADRLLEQGCTDFTKDLEVIFDAAPAQRQTLLFSATLTDTLKVLQGIATNKPFFWEAPAE 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 213 VRTVEQLDQRYLLVPEKVKDAYLVHLIQTFQDEHEDWSIIIFTSTCKTCQVLNMMLRRFN 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
++ + M Q R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPSVALHSMMKQKARFAALAKFKSSVYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G+AI+LV QY++ IE+ I KL +F EE VL +L +V +
Sbjct: 333 IHRVGRTARAGRDGIAITLVTQYDIHLLHAIEEEIKMKLKDFSVEEATVLKILTQVNVVR 392
Query: 362 RISQMTI-------KDSGNKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ + K NKR++ +G D D + R+ + K + R+
Sbjct: 393 RECEIKLEATDFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIRQKNRQ 442
>gi|427783023|gb|JAA56963.1| Putative atp-dependent rna helicase [Rhipicephalus pulchellus]
Length = 467
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 168/374 (44%), Positives = 242/374 (64%), Gaps = 11/374 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+GKD IG A+TGSGKT AFALPILQ L E FA +L+PTRELA QI +QF+
Sbjct: 46 SGKDCIGCAKTGSGKTLAFALPILQKLFEDPY------GIFALILTPTRELAFQICDQFK 99
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
+G + L+ V+VGG+DM+ Q L + PH+VVATPGRL DHL + F+L +++LVL
Sbjct: 100 VVGKAVGLKECVIVGGMDMVTQGQVLAESPHVVVATPGRLADHLESCNTFTLKRIRFLVL 159
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADRLL F + L I +P+ RQT LFSAT+T +++L+ + +P A +
Sbjct: 160 DEADRLLEGHFNEQLKTIFAALPK-RQTLLFSATITATLEELRNVAMTDPFFYTAPADVV 218
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLGQR 243
TV+ L Q+Y +P ++ YLV+IL + S ++FT TC ++L++ L++LG
Sbjct: 219 TVEELDQRYVLMPVSVREAYLVHILKRFLDSMPKGSVIIFTGTCKGCQVLSIALKSLGFL 278
Query: 244 AIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIH 303
P+ M Q +RL +LN FK+ +L+ TDVASRGLDIPSV++V+N+++P+ KDY+H
Sbjct: 279 NAPLHSQMPQRERLASLNLFKSNTTRVLVATDVASRGLDIPSVELVLNHNVPSAPKDYVH 338
Query: 304 RVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRI 363
RVGRTARAGR G AI+LV Q+++ IE LI KL P +E EVL +L +V+ A R
Sbjct: 339 RVGRTARAGRGGKAITLVTQHDVHLVEAIEALIKTKLVLQPTKESEVLKILTQVSVALRE 398
Query: 364 SQMTIKDSGNKRRR 377
+++ + + + R+
Sbjct: 399 AEIRLDEQDFEERK 412
>gi|380026593|ref|XP_003697032.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Apis
florea]
Length = 452
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 173/393 (44%), Positives = 248/393 (63%), Gaps = 22/393 (5%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG D IG A+TGSGKT AFALPILQ L E FA VL+PTRELA QI++QF
Sbjct: 37 AGDDCIGCAKTGSGKTLAFALPILQKLSEDPY------GIFALVLTPTRELAFQIADQFS 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
A+G I L+ V+VGG+DM+ Q L L K PHIVVATPGRL DHL + FSL +K+LVL
Sbjct: 91 AIGKSIGLKKCVIVGGMDMVIQGLELSKHPHIVVATPGRLADHLESCNTFSLKQIKFLVL 150
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEA--ASK 185
DEADRLL F+ L I +P+ +Q LFSATMT + K++ E+ S
Sbjct: 151 DEADRLLEGYFDDQLKTIFEALPKQKQMLLFSATMTDTLHKVKHIVSSKTFIWESKDESG 210
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSAS----STMVFTRTCDATRLLALMLRNLG 241
+TV L Q Y P+ +D +LV ++ A+ S M+FT TC ++L++ L ++G
Sbjct: 211 IATVKELNQHYVLCPSDIRDSFLVEVIRTFRANNKNGSIMIFTDTCKHCQILSMTLNDVG 270
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + + + Q RL AL +FK+ ILI TDVA+RGLDIP+V++VIN+ IP K+Y
Sbjct: 271 FKNVALHSMVKQKDRLAALVQFKSNHIKILIATDVAARGLDIPTVELVINHIIPNVPKEY 330
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAG++G+AI+L+ ++++ +E +IG KL E+ ++E++ +L +++ AK
Sbjct: 331 IHRVGRTARAGKSGMAITLITPHDIKLLHAVENIIGTKLTEYKVNDKEIITILTQISVAK 390
Query: 362 RISQMTIKDSG-------NKRRR---KGGDEDD 384
R ++M + ++ NKR++ +G D D+
Sbjct: 391 REAEMKLDETNFYEKKIINKRKKLILEGKDPDE 423
>gi|356555223|ref|XP_003545934.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Glycine
max]
Length = 591
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 176/375 (46%), Positives = 243/375 (64%), Gaps = 11/375 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+ ++G+ +TGSGKT AFALPIL L AE+ V FA V++PTRELA Q++EQF A
Sbjct: 106 GRHVLGVDETGSGKTAAFALPILHRL---AEHPFGV---FALVVTPTRELAFQLAEQFRA 159
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLV 126
LGS + LR V+VGG+DM++Q L RPH+V+ATPGR+ L N K+LV
Sbjct: 160 LGSAVHLRITVVVGGMDMLRQAKELAARPHLVIATPGRIHALLRNNPDIPPVFSRTKFLV 219
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
LDEADR+L+ F++ L I +P RQ FSAT T ++KL+ EA +
Sbjct: 220 LDEADRVLDVGFQEELRFIFQCLPENRQNLFFSATTTSNLQKLRGRYQDKMYVYEAYEGF 279
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYIL---TEVSASSTMVFTRTCDATRLLALMLRNLGQR 243
TV+TLKQQ F+P K KD YL++IL ++ S +VF TC L+LML L Q
Sbjct: 280 KTVETLKQQAIFIPKKVKDVYLMHILDKMEDMGIRSAIVFISTCRDCHRLSLMLEVLDQE 339
Query: 244 AIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIH 303
A + SQ++RL AL++FK+G+ +IL+ TDVASRGLDIP+VD+VINYD+P +DYIH
Sbjct: 340 AAALYSFKSQAQRLEALHQFKSGKVSILLATDVASRGLDIPTVDLVINYDVPRFPRDYIH 399
Query: 304 RVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRI 363
RVGRTARAGR G+A+SLV Q +++ +IE LI K+L +E + L L+++V AK +
Sbjct: 400 RVGRTARAGRGGLALSLVTQNDVDLIHEIEALIEKQLEMIEYKENDALSLMKKVFSAKNV 459
Query: 364 SQMTIKDSGNKRRRK 378
++M + D G + + K
Sbjct: 460 AEMKMIDDGFEEKAK 474
>gi|351713807|gb|EHB16726.1| Putative ATP-dependent RNA helicase DDX49 [Heterocephalus glaber]
Length = 453
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 182/409 (44%), Positives = 245/409 (59%), Gaps = 23/409 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 19 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 72
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ F + + +LV+D
Sbjct: 73 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFHIKKIHFLVMD 132
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +++LQ P A +
Sbjct: 133 EADRLLEQGCTDFTADLETILAAVPAHRQTLLFSATLTDTLRELQGLATNQPFFWAAQAP 192
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
STV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 193 VSTVEQLDQRYLLVPEKVKDAYLVHLVQSFQDEHEDWSIIIFTNTCKTCQILCMMLRRFN 252
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 253 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 312
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I K+L EF +E EVL +L +V +
Sbjct: 313 IHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKQLEEFSVKEAEVLQILTQVNVVR 372
Query: 362 RISQMTI-------KDSGNKRRR---KGGDEDDDIGRQFGINKKKLSKR 400
R ++ + K NKR++ +G D D R+ + K K R
Sbjct: 373 RECEIKLEAAHFDEKKEINKRKQLILEGKDPDLQARRRAELAKIKQRNR 421
>gi|38198641|ref|NP_938179.1| probable ATP-dependent RNA helicase DDX49 [Danio rerio]
gi|28839770|gb|AAH47834.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Danio rerio]
Length = 468
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 170/377 (45%), Positives = 237/377 (62%), Gaps = 13/377 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LP+LQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCMGCAKTGSGKTAAFVLPVLQKLSEDPY------GVFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L K+PH+VVATPGRL DH+ ++ +L +++L++D
Sbjct: 93 LGKPLGLKDCIIVGGMDMVTQGLELSKKPHVVVATPGRLADHIRSSDTINLNRIQFLIMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF K L+ IL+ +P RQT LFSAT+T +++LQ + P E S
Sbjct: 153 EADRLLEQGCTDFTKDLEVILSAVPAKRQTLLFSATLTDTLQQLQSIAMNRPFFWEHKSD 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TV+ L Q++ P K KD YLV+++ E S ++FT TC + ++L +MLR
Sbjct: 213 VQTVEELDQRFILTPEKVKDAYLVHLIQTFQDEHDDWSIIIFTNTCKSCQILTMMLREFN 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
I + M Q +R L KFK+ ILI TDVA+RGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTISLHSMMKQRQRFANLAKFKSNVFKILIATDVAARGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR GV+I+LV QY++ IE+ KL EFP EE+EVL +L +V +
Sbjct: 333 IHRVGRTARAGRNGVSITLVTQYDIHLINAIEEQNQTKLKEFPIEEKEVLKILTQVNVTR 392
Query: 362 RISQMTIKDSGNKRRRK 378
R ++ ++ + ++K
Sbjct: 393 RQCEIKLESTDFDEKKK 409
>gi|49903707|gb|AAH75762.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Danio rerio]
Length = 468
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 171/377 (45%), Positives = 240/377 (63%), Gaps = 13/377 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LP+LQ L +E+ V F VL+PTRELA QI+EQF
Sbjct: 39 GRDCMGCAKTGSGKTAAFVLPVLQKL---SEDPYGV---FCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L K+PH+VVATPGRL DH+ ++ +L +++L++D
Sbjct: 93 LGKPLGLKDCIIVGGMDMVTQGLELSKKPHVVVATPGRLADHIRSSDTINLNRIQFLIMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF K L+ IL+ +P RQT LFSAT+T +++LQ + P E S
Sbjct: 153 EADRLLEQGCTDFTKDLEVILSAVPAKRQTLLFSATLTDTLQQLQSIAMNRPFFWEHKSD 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TV+ L Q++ P K KD YLV+++ E S ++FT TC + ++L +MLR
Sbjct: 213 VQTVEELDQRFILTPEKVKDAYLVHLIQTFQDEHDDWSIIIFTNTCKSCQILTMMLREFN 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
I + M Q +R L KFK+ ILI TDVA+RGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTISLHSMMKQRQRFANLVKFKSNVFKILIATDVAARGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR GV+I+LV QY++ IE+ KL EFP EE+EVL +L +V +
Sbjct: 333 IHRVGRTARAGRNGVSITLVTQYDIHLINAIEEQNQTKLKEFPIEEKEVLKILTQVNVTR 392
Query: 362 RISQMTIKDSGNKRRRK 378
R ++ ++ + ++K
Sbjct: 393 RQCEIKLESTDFDEKKK 409
>gi|307195490|gb|EFN77376.1| Probable ATP-dependent RNA helicase DDX49 [Harpegnathos saltator]
Length = 444
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 176/384 (45%), Positives = 244/384 (63%), Gaps = 21/384 (5%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
G+D IG A+TGSGKT AFALPILQ L E FA VL+PTRELA QI++QF
Sbjct: 17 GGEDCIGCAKTGSGKTLAFALPILQKLCE------DPYGIFALVLTPTRELAFQIADQFA 70
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
A+G I+L+ V+VGG+DMM Q L L KRPHIVVATPGRL DHL + FSL +K+LVL
Sbjct: 71 AIGKAINLKKCVIVGGMDMMVQGLELSKRPHIVVATPGRLADHLDSCNTFSLKRIKFLVL 130
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKI---EAAS 184
DEADRLL F+K L I +P +Q LFSATMT + + ++ N V I + +
Sbjct: 131 DEADRLLGGHFDKQLKTIFATLPEQKQVLLFSATMTNDLDNV-KSVASNKVFIWEEKDDA 189
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSAS----STMVFTRTCDATRLLALMLRNL 240
+TV L Q+Y P D YLV ++ A+ S MVFT TC +LL++ L ++
Sbjct: 190 GIATVKELDQRYVLCPKDVLDSYLVEVIRTFCATNKNGSIMVFTDTCKNCQLLSMALNDV 249
Query: 241 GQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKD 300
G + + + Q +RL ALNKFK+ ILI TDVA+RGLDI V++V+N+ IP K+
Sbjct: 250 GFTNVALHAMIKQKERLAALNKFKSNHVQILIATDVAARGLDIHEVELVVNHVIPNVPKE 309
Query: 301 YIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
YIHRVGRTARAGR G+A+SL+ ++++ IE IG KL E+ +++E++ +L +++ A
Sbjct: 310 YIHRVGRTARAGRNGMAVSLITPHDVKLLHAIEDAIGTKLTEYKVDDKEIVTILTQISVA 369
Query: 361 KRISQMTIKDSG-------NKRRR 377
KR +++ + ++ NKR++
Sbjct: 370 KREAEIKLDETDFFEKKMINKRKK 393
>gi|383851888|ref|XP_003701463.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like
[Megachile rotundata]
Length = 449
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 173/393 (44%), Positives = 251/393 (63%), Gaps = 22/393 (5%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D IG A+TGSGKT AFALPILQ L E FA +L+PTRELA QI++QF
Sbjct: 37 AGEDCIGCAKTGSGKTLAFALPILQKLSEDPY------GIFALILTPTRELAFQIADQFS 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
A+G I L+ V+VGG+DM+ Q L L K PHIVVATPGRL DHLT+ FSL +K+LVL
Sbjct: 91 AIGKSIGLKKCVIVGGMDMVIQGLELSKHPHIVVATPGRLADHLTSCNTFSLKKIKFLVL 150
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAA--SK 185
DEADRLL F+ L I + +P+ +Q LFSATMT + K++ K E+ S
Sbjct: 151 DEADRLLEGHFDDQLKVIFDALPKQKQMLLFSATMTDALSKVKDIVSKKAFIWESTEDSG 210
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLG 241
+TV L Q+Y P+ +D +LV ++ T S M+FT TC ++L++ML ++G
Sbjct: 211 VATVRQLDQRYVLCPSDVRDSFLVEVIRTFRTTNENGSIMIFTDTCKNCQVLSMMLSDVG 270
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + + + Q RL AL++FK+ ILI TDVA+RGLDIP+V++V+N+ +P K+Y
Sbjct: 271 FKNVALHAMIKQKDRLAALSQFKSNHIQILIATDVAARGLDIPTVELVVNHIVPNVPKEY 330
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAG+ G+AI+L+ +++ +E+ IG KL E+ + E++ +L +++ AK
Sbjct: 331 IHRVGRTARAGKGGMAITLIAPNDIKLLHAVEEAIGTKLTEYKVNDTEIIKILTQISVAK 390
Query: 362 RISQMTIKDSG-------NKRRR---KGGDEDD 384
R ++M + ++ NKR++ +G D D+
Sbjct: 391 REAEMKLDETDFYEKKRINKRKKLILEGKDPDE 423
>gi|350415766|ref|XP_003490744.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Bombus
impatiens]
Length = 452
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 175/393 (44%), Positives = 246/393 (62%), Gaps = 22/393 (5%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG D IG A+TGSGKT AFALPILQ L E FA VL+PTRELA QI++QF
Sbjct: 37 AGDDCIGCAKTGSGKTLAFALPILQKLSEDPY------GIFALVLTPTRELAFQIADQFS 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
A+G I L+ V+VGG+DM+ Q L L K PHIVVATPGRL DHL + FSL +K+LVL
Sbjct: 91 AIGKSIGLKKCVIVGGMDMVVQGLELSKHPHIVVATPGRLADHLESCNTFSLKQIKFLVL 150
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY- 186
DEADRLL F+ L I +P+ +Q LFSATMT + K++ E+ ++
Sbjct: 151 DEADRLLEGHFDDQLKTIFEALPKRKQMLLFSATMTDTLDKVKHIASSKAFIWESKDEFG 210
Query: 187 -STVDTLKQQYRFVPAKYKDCYLVYILTEVSAS----STMVFTRTCDATRLLALMLRNLG 241
+TV L Q+Y P+ +D +LV + AS S M+FT TC ++L++ L ++G
Sbjct: 211 VATVKELDQRYVLCPSDVRDSFLVEAIRTFRASNKDGSIMIFTDTCKHCQVLSMTLNDVG 270
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + + Q RL AL +FK+ ILI TDVA+RGLDIP+V++VIN+ IP +K+Y
Sbjct: 271 FNNVALHAMIKQKDRLAALTQFKSNHAKILIATDVAARGLDIPTVELVINHIIPNVTKEY 330
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAG+ G+AI+L+ ++++ IE IG KL E+ ++E++ +L +++ AK
Sbjct: 331 IHRVGRTARAGKNGMAITLITPHDIKLLHAIENAIGTKLTEYKVNDKEIVTILTQISVAK 390
Query: 362 RISQMTI-------KDSGNKRRR---KGGDEDD 384
R ++M + K NKR++ +G D D+
Sbjct: 391 REAEMKLDEMDFYGKKMINKRKKLILEGKDPDE 423
>gi|156549811|ref|XP_001606554.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Nasonia
vitripennis]
Length = 456
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/397 (44%), Positives = 247/397 (62%), Gaps = 24/397 (6%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+GKD IG A+TGSGKT AFALPILQ L E FA VL+PTRELA QI +QF
Sbjct: 38 SGKDCIGCAKTGSGKTLAFALPILQKLSEDPY------GIFALVLTPTRELAFQIGDQFA 91
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
A+G I+L+ +VGG+DM+ Q L + PHIVVATPGRL DHL + FSL +K+LVL
Sbjct: 92 AIGKTINLKKCTIVGGMDMVVQGQELARHPHIVVATPGRLADHLESCNTFSLARIKFLVL 151
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAA--SK 185
DEADRLL F++ L I +P+ RQ+ LFSAT+T + K+++ K E+ S
Sbjct: 152 DEADRLLGGHFDEQLSVIFKALPKNRQSLLFSATITDALDKVKQVSTKEWFIWESTDDSG 211
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSAS----STMVFTRTCDATRLLALMLRNLG 241
+TV L Q+Y P +D +LV ++ A S M+FT TC +LL++ L +G
Sbjct: 212 VATVKELDQRYVLCPKDVRDAFLVEVIRTFRADNENGSIMIFTDTCKNCQLLSMTLNEVG 271
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + + Q +RL AL+KFK+ ILI TDVA+RGLDIP V +VIN++IP K+Y
Sbjct: 272 FDNVALHAMIKQKERLSALSKFKSNHTKILIATDVAARGLDIPIVALVINHNIPNIPKEY 331
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G+A+SLV Y++ IE+ IG KL EF E++E++ + +++ K
Sbjct: 332 IHRVGRTARAGRGGMAVSLVTPYDINLLHAIEETIGTKLTEFKVEDKEIVNIFTQISVTK 391
Query: 362 RISQMTIKDSG-------NKRRR-----KGGDEDDDI 386
R +++ + ++ NKR++ K DE D+I
Sbjct: 392 REAEIKLDETDFYEKKMINKRKKLILEGKDPDEVDEI 428
>gi|332016384|gb|EGI57297.1| Putative ATP-dependent RNA helicase DDX49 [Acromyrmex echinatior]
Length = 461
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 169/369 (45%), Positives = 236/369 (63%), Gaps = 12/369 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT AF LPILQ L E FA VL+PTRELA QI++QF A
Sbjct: 48 GEDCIGCAKTGSGKTLAFVLPILQKLCEDPY------GIFALVLTPTRELAFQIADQFTA 101
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+G I+L+ V+VGG+DMM Q L L KRPHIVVATPGRL DHL + FSL +K+LVLD
Sbjct: 102 IGKAINLKKCVIVGGMDMMVQGLELSKRPHIVVATPGRLADHLDSCDTFSLQKIKFLVLD 161
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY-- 186
EADRLL F+ L I +P+ +Q FSATMT + K+++ + +
Sbjct: 162 EADRLLGGHFDGQLKTIFAALPKQKQVLFFSATMTDTLDKVKQIASAEVFTWQEEDDFGI 221
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQ 242
+TV L Q+Y P D YLV ++ T S M+FT TC +LL++ML N+G
Sbjct: 222 ATVKELDQRYVLCPKDVLDSYLVEVIKTFRTTNENGSIMIFTDTCKYCQLLSMMLNNVGF 281
Query: 243 RAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYI 302
+ + + Q +RL ALNKFK+ ILI TDVA+RGLDIP+V ++IN+ IP K+YI
Sbjct: 282 TNVALHAMIKQKERLAALNKFKSNHVQILIATDVAARGLDIPTVQLIINHVIPNVPKEYI 341
Query: 303 HRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
HRVGRTARAG+ G++ISL+ +++ IE +IG KL E+ ++++++ +L +V+ AKR
Sbjct: 342 HRVGRTARAGKNGMSISLITPNDIKLLHAIENVIGIKLTEYKIDDKKIITILTQVSVAKR 401
Query: 363 ISQMTIKDS 371
+++ + ++
Sbjct: 402 TAEIKLDET 410
>gi|312067818|ref|XP_003136922.1| Ddx49-A-prov protein [Loa loa]
Length = 478
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/378 (46%), Positives = 239/378 (63%), Gaps = 14/378 (3%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG D++G A+TG+GKT AF LPIL E+A + + A VL+PTRELAIQI +QF
Sbjct: 79 AGSDVLGCAKTGTGKTLAFGLPILH---ELAIDPYGICAL---VLTPTRELAIQIGDQFA 132
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHL---TNTKGFSLGTLKY 124
ALG+ I L+ ++VGG D + Q L +RPHIVVATPGRL DHL + G L++
Sbjct: 133 ALGTPIGLKIGIVVGGKDRVAQGNDLARRPHIVVATPGRLADHLESDSENTGKLFKKLRF 192
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADRLL+ + L ILN +P+ RQT LFSAT+T + +L + +K P E S
Sbjct: 193 LVLDEADRLLDGQYSIELKTILNFLPKQRQTLLFSATITSALSQLHQVSVKKPYFFEDKS 252
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSA----SSTMVFTRTCDATRLLALMLRNL 240
+ +TVD L+Q+Y P KD YLVY++ S ++F+ TC + LA+M L
Sbjct: 253 EIATVDKLEQKYVLCPCAVKDAYLVYVVKNFHEKHPDSLILIFSHTCRECQALAIMFHGL 312
Query: 241 GQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKD 300
G + + +SQ +R +L KF++G ILICTDVASRGLDIP VD+VIN+++P N K
Sbjct: 313 GFQVGSLHSQISQQERTSSLTKFRSGRIKILICTDVASRGLDIPHVDLVINHNVPQNPKT 372
Query: 301 YIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
YIHRVGR+ARAGR G A+ V QY++ +IEK+IGKKL + +++V + +V
Sbjct: 373 YIHRVGRSARAGRFGCALLFVTQYDIFLVQEIEKVIGKKLDKLIVNDKKVTQYVTQVLVT 432
Query: 361 KRISQMTIKDSGNKRRRK 378
KR +++ + D N RK
Sbjct: 433 KREAEIKL-DQQNFGERK 449
>gi|393910350|gb|EFO27145.2| Ddx49-A-prov protein [Loa loa]
Length = 509
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/378 (46%), Positives = 239/378 (63%), Gaps = 14/378 (3%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG D++G A+TG+GKT AF LPIL E+A + + A VL+PTRELAIQI +QF
Sbjct: 79 AGSDVLGCAKTGTGKTLAFGLPILH---ELAIDPYGICAL---VLTPTRELAIQIGDQFA 132
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHL---TNTKGFSLGTLKY 124
ALG+ I L+ ++VGG D + Q L +RPHIVVATPGRL DHL + G L++
Sbjct: 133 ALGTPIGLKIGIVVGGKDRVAQGNDLARRPHIVVATPGRLADHLESDSENTGKLFKKLRF 192
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADRLL+ + L ILN +P+ RQT LFSAT+T + +L + +K P E S
Sbjct: 193 LVLDEADRLLDGQYSIELKTILNFLPKQRQTLLFSATITSALSQLHQVSVKKPYFFEDKS 252
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSA----SSTMVFTRTCDATRLLALMLRNL 240
+ +TVD L+Q+Y P KD YLVY++ S ++F+ TC + LA+M L
Sbjct: 253 EIATVDKLEQKYVLCPCAVKDAYLVYVVKNFHEKHPDSLILIFSHTCRECQALAIMFHGL 312
Query: 241 GQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKD 300
G + + +SQ +R +L KF++G ILICTDVASRGLDIP VD+VIN+++P N K
Sbjct: 313 GFQVGSLHSQISQQERTSSLTKFRSGRIKILICTDVASRGLDIPHVDLVINHNVPQNPKT 372
Query: 301 YIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
YIHRVGR+ARAGR G A+ V QY++ +IEK+IGKKL + +++V + +V
Sbjct: 373 YIHRVGRSARAGRFGCALLFVTQYDIFLVQEIEKVIGKKLDKLIVNDKKVTQYVTQVLVT 432
Query: 361 KRISQMTIKDSGNKRRRK 378
KR +++ + D N RK
Sbjct: 433 KREAEIKL-DQQNFGERK 449
>gi|399949627|gb|AFP65285.1| DEAD box protein [Chroomonas mesostigmatica CCMP1168]
Length = 398
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 165/353 (46%), Positives = 232/353 (65%), Gaps = 6/353 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
KD+IG AQTGSGKT A+ LPI+Q L+ ++++ F + ++ P RELA QI+ FEA
Sbjct: 40 KDIIGYAQTGSGKTIAYLLPIVQNLII----RKSI--FNSLIIVPARELAFQIASHFEAF 93
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
G+ +R AV+VGG++ Q + PHI+++TPGRL+DHL T L + VLDE
Sbjct: 94 GNIFGIRIAVVVGGINAGPQKALIFMNPHILISTPGRLVDHLAKTIKLKLDKISIFVLDE 153
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADRLL+ DF+K IL+ + R +Q++LFSATMT K++KLQ+ +K PVKIE KY V
Sbjct: 154 ADRLLHLDFKKEFLIILSELSRTKQSFLFSATMTSKIEKLQKNFMKAPVKIEIHQKYKAV 213
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
TL Q Y F+P K+K+ Y V++ E SS + F T + L+++ LG + I G
Sbjct: 214 KTLIQNYIFIPRKFKEIYFVFLCNEFIGSSILAFVDTQKYAEKITLLVKLLGFKGGCIHG 273
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+ QSKR L+KFK GE +LI TD+A+RGLDIP VD+VIN+D+P+ +K+YIHRVGRTA
Sbjct: 274 GLKQSKRFENLHKFKLGEIKLLIATDLAARGLDIPCVDLVINFDLPSFAKEYIHRVGRTA 333
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
RAG +G AI+L+ QY++ +IE LIG+K E + VL + + V E K+
Sbjct: 334 RAGNSGRAINLITQYDVSSCQKIESLIGEKFIELKYNPKFVLEIEKTVLETKK 386
>gi|242050992|ref|XP_002463240.1| hypothetical protein SORBIDRAFT_02g040380 [Sorghum bicolor]
gi|241926617|gb|EER99761.1| hypothetical protein SORBIDRAFT_02g040380 [Sorghum bicolor]
Length = 502
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 169/377 (44%), Positives = 243/377 (64%), Gaps = 14/377 (3%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D++G+A+TGSGKT AFALPIL L E+ V A L+PTRELA Q++EQF
Sbjct: 112 AGEDVLGIAETGSGKTAAFALPILHRL---GEDPYGVAAL---ALAPTRELAAQLAEQFR 165
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYL 125
ALG+ + LRC +GG D + Q L +RPH+VVATPGR+ + + + K+L
Sbjct: 166 ALGAPLGLRCLAAIGGFDSLAQAKGLSRRPHVVVATPGRIATLVKDDPDLAKVFARTKFL 225
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ +FE+ L I +P+ RQT+LFSATM+ ++ L EA
Sbjct: 226 VLDEADRVLDVNFEEELRVIFGCLPKKRQTFLFSATMSDNLRSLLELSGNKSYFFEAYEG 285
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT------EVSASSTMVFTRTCDATRLLALMLRN 239
+ TV+TLKQQY VP + K+ +L Y+L+ E S +VF C+ + L L+L
Sbjct: 286 FKTVETLKQQYIHVPPQGKELHLWYLLSIMKEKKEDPIRSAIVFVSKCNVCQYLDLLLEE 345
Query: 240 LGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSK 299
LG A+ ++ H SQ++RL ALN+FK+G+ ILI TDV SRGLDI +VD+VINYD+P + +
Sbjct: 346 LGYPAVALNSHKSQAQRLLALNRFKSGQVPILISTDVGSRGLDIQTVDLVINYDMPMSPR 405
Query: 300 DYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTE 359
DYIHRVGRTARA R G+AIS V Q ++ +IE ++GK+L + ++EV + +V +
Sbjct: 406 DYIHRVGRTARASRGGLAISFVTQKDICLLHEIEDVVGKQLEAYECNDKEVTKDITKVFK 465
Query: 360 AKRISQMTIKDSGNKRR 376
A+R+++M +D G+ +
Sbjct: 466 ARRLAKMRSRDEGHDEK 482
>gi|340728741|ref|XP_003402675.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Bombus
terrestris]
Length = 452
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 174/393 (44%), Positives = 245/393 (62%), Gaps = 22/393 (5%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG D IG A+TGSGKT AFALPILQ L E FA +L+PTRELA QI++QF
Sbjct: 37 AGDDCIGCAKTGSGKTLAFALPILQKLSEDPY------GIFALILTPTRELAFQIADQFS 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
A+G I L+ V+VGG+DM+ Q L L K PHIVVATPGRL DHL + FSL +K+LVL
Sbjct: 91 AIGKSIGLKKCVIVGGMDMVVQGLELSKHPHIVVATPGRLADHLESCNTFSLKQIKFLVL 150
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEA--ASK 185
DEADRLL F+ L I +P+ +Q LFSATMT + K++ E+ S
Sbjct: 151 DEADRLLEGHFDDQLKTIFEALPKRKQMLLFSATMTDTLDKVKHIASSKAFIWESKDESG 210
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSAS----STMVFTRTCDATRLLALMLRNLG 241
+TV L Q+Y P+ +D +LV + S S M+FT TC ++L++ L ++G
Sbjct: 211 VATVKELDQRYILCPSDVRDSFLVEAIRTFRGSNKDGSIMIFTDTCKHCQVLSMTLNDVG 270
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + + + Q RL AL +FK+ ILI TDVA+RGLDIP+V++VIN+ IP +K+Y
Sbjct: 271 FKNVALHAMIKQKDRLAALTQFKSNHAKILIATDVAARGLDIPTVELVINHIIPNVTKEY 330
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAG+ G+AI+L+ ++++ IE IG KL E+ ++E++ +L +++ AK
Sbjct: 331 IHRVGRTARAGKNGMAITLITPHDIKLLHAIENAIGTKLTEYKVNDKEIVTILTQISVAK 390
Query: 362 RISQMTI-------KDSGNKRRR---KGGDEDD 384
R ++M + K NKR++ +G D D+
Sbjct: 391 REAEMKLDEMDFYGKKMINKRKKLILEGKDPDE 423
>gi|322796322|gb|EFZ18887.1| hypothetical protein SINV_00745 [Solenopsis invicta]
Length = 420
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 173/369 (46%), Positives = 240/369 (65%), Gaps = 12/369 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT AFALPILQ L E FA VL+PTRELA QI++QF A
Sbjct: 43 GEDCIGCAKTGSGKTLAFALPILQKLCEDPY------GIFALVLTPTRELAFQIADQFAA 96
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+G I+L+ V+VGG+DMM Q L L KRPHIVVATPGRL DHL + FSL +K+LVLD
Sbjct: 97 IGKVINLKKCVIVGGMDMMIQGLELSKRPHIVVATPGRLADHLDSCNTFSLQKIKFLVLD 156
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQR-ACLKNPVKIEA-ASKY 186
EADRLL F+K L +I V+P+ +Q FSATMT + K+++ AC K E +
Sbjct: 157 EADRLLGGHFDKQLKKIFAVLPKQKQILFFSATMTDTLDKVKKMACNKVFTWQEKDDAGI 216
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQ 242
+TV L Q+Y P D YLV ++ T M+FT TC +LL++ L ++G
Sbjct: 217 ATVKELDQRYVLCPKDVLDSYLVEVIRTFRTTNKNGCIMIFTDTCKNCQLLSMTLNDVGF 276
Query: 243 RAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYI 302
+ + + Q +RL ALNKFK+ ILI T+VA+RGLDIP+V +V+N+ IP K+YI
Sbjct: 277 TNVALHAMLKQKERLVALNKFKSNHIQILIATNVAARGLDIPAVQLVVNHVIPNVPKEYI 336
Query: 303 HRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
HRVGRTARAG G+AISL+ ++++ IE IG KL E+ +++E++ +L +++ AKR
Sbjct: 337 HRVGRTARAGENGMAISLITPHDIKLLHAIEDAIGTKLTEYKVDDKEIVTILTQISVAKR 396
Query: 363 ISQMTIKDS 371
+++ + ++
Sbjct: 397 EAEIKLDET 405
>gi|198427069|ref|XP_002129152.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 49
[Ciona intestinalis]
Length = 452
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 169/377 (44%), Positives = 247/377 (65%), Gaps = 19/377 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD G ++TGSGKT AFALP+LQ L E F VL+PTRELA QISEQF
Sbjct: 42 GKDCFGCSKTGSGKTAAFALPVLQKLSEDPY------GIFCLVLTPTRELAYQISEQFTL 95
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+G I++R +V+VGG+D++QQ L K+PHIV+ATPGRL D L + + +K+LVLD
Sbjct: 96 IGKPINIRTSVIVGGMDIIQQAYELQKKPHIVIATPGRLADLLRSNEN----NVKFLVLD 151
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL+ DF L+ I + +P+ RQT LFSAT+T + +++ K+P ++ +K
Sbjct: 152 EADRLLDKLDGDFTNDLNLIFSSLPKERQTLLFSATLTDTLNEVKELSTKSPFFWQSDNK 211
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYI----LTEVSASSTMVFTRTCDATRLLALMLRNLG 241
STVD L Q+Y +P +D YLVYI L + S M+FT+TC ++L ++L+ G
Sbjct: 212 VSTVDNLDQRYILLPEHIRDGYLVYICKDLLEKQPTRSIMIFTKTCKNCQVLGMLLQKAG 271
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + + M Q +RL AL++FK+ +L+ TDVA+RGLDIP V +VIN+++P +K+Y
Sbjct: 272 FQCVVLHSLMKQRERLTALSRFKSSNTRLLVATDVAARGLDIPVVQVVINHNVPGLAKNY 331
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR+G++I+LV Q+++ IE+ I KL E+ +E EVL +L +V K
Sbjct: 332 IHRVGRTARAGRSGISITLVTQFDIHRVQSIEEHINTKLKEYEVDEREVLKILTKVNVMK 391
Query: 362 RISQMTIKDS--GNKRR 376
R ++ +++ G K++
Sbjct: 392 RETEWVLEEQKFGEKKK 408
>gi|328789449|ref|XP_003251275.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Apis
mellifera]
Length = 452
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 171/393 (43%), Positives = 246/393 (62%), Gaps = 22/393 (5%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG D IG A+TGSGKT AFALPILQ L E FA VL+PTRELA QI++QF
Sbjct: 37 AGTDCIGCAKTGSGKTLAFALPILQKLSEDPY------GIFALVLTPTRELAFQIADQFS 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
A+G I L+ ++VGG+DM+ Q L L K PHIVVATPGRL DHL + FSL +K+LVL
Sbjct: 91 AIGKSIGLKKCIIVGGMDMVVQGLELSKHPHIVVATPGRLADHLESCNTFSLKQIKFLVL 150
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEA--ASK 185
DEADRLL F+ L I +P+ +Q LFSATMT + K++ E+ S
Sbjct: 151 DEADRLLEGYFDDQLKTIFEALPKQKQILLFSATMTDTLHKVKHIVSNKAFIWESKDESG 210
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSAS----STMVFTRTCDATRLLALMLRNLG 241
+TV L Q Y P +D +LV ++ A+ S ++FT TC ++L++ L ++G
Sbjct: 211 IATVKELNQHYVLCPRDIRDSFLVEVIRTFRANNKNGSIIIFTDTCKHCQILSMTLNDVG 270
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + + + Q RL AL +FK+ ILI TDVA+RGLDIP+V+++IN+ IP K+Y
Sbjct: 271 FKNVALHSMVKQKDRLAALVQFKSNHIKILIATDVAARGLDIPTVELIINHIIPNVPKEY 330
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAG++G+AI+L+ ++++ IE IG KL E+ ++E++ +L +++ AK
Sbjct: 331 IHRVGRTARAGKSGMAITLITPHDIKLLHAIENTIGTKLTEYKINDKEIITILTQISVAK 390
Query: 362 RISQMTIKDSG-------NKRRR---KGGDEDD 384
R ++M + ++ NKR++ +G D D+
Sbjct: 391 REAEMKLDETNFYEKKIINKRKKLILEGKDPDE 423
>gi|357121829|ref|XP_003562620.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like
[Brachypodium distachyon]
Length = 500
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 164/373 (43%), Positives = 246/373 (65%), Gaps = 12/373 (3%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG++++G+A+TGSGKT AFALPIL L E+ V A V++PTRELA Q++EQF
Sbjct: 112 AGENVLGIAETGSGKTAAFALPILHRL---GEDPFGVAAL---VVTPTRELAAQLAEQFR 165
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYL 125
ALGS + LRC +GG D + Q L +RPH+VVATPGR+ + N + K+L
Sbjct: 166 ALGSPLGLRCLAAIGGFDSLAQAKGLSRRPHVVVATPGRIATLINNDPDLAKVFARTKFL 225
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+++ +FE+ L I + +P+ RQT+LFSATM++ ++ L N EA
Sbjct: 226 VLDEADRVIDSNFEEDLKVIFDCLPKKRQTFLFSATMSENLRSLLELSGDNSYFFEAYEG 285
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT---EVSASSTMVFTRTCDATRLLALMLRNLGQ 242
+ TV+TLKQ+Y +P K+ +L+Y+L+ E + S +VF TC + L +L LG+
Sbjct: 286 FKTVETLKQKYIHIPPDGKELHLMYLLSKMKEDNIRSAIVFVSTCRTCQYLDFLLEELGR 345
Query: 243 RAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYI 302
A+ + H +QS+RL AL++FK+G+ +LI TDVASRGLDI +VD+VINYDIP +DYI
Sbjct: 346 SAVSLHSHKAQSRRLSALHRFKSGQVPVLIATDVASRGLDIQTVDLVINYDIPRFPRDYI 405
Query: 303 HRVGRTARAGRTGVAISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
HRVGRTARA R G++IS ++ Q ++ ++E +GK+ + +++EV + +V +A+
Sbjct: 406 HRVGRTARATRGGLSISFMSLQRDICLLHEVEDDVGKRFDAYECDDKEVTKDITKVFKAR 465
Query: 362 RISQMTIKDSGNK 374
R++ M + D G++
Sbjct: 466 RLANMRMADEGHE 478
>gi|428167084|gb|EKX36049.1| hypothetical protein GUITHDRAFT_165849 [Guillardia theta CCMP2712]
Length = 312
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 153/256 (59%), Positives = 196/256 (76%), Gaps = 6/256 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLI LA+TGSGKTG+FALPI++ALL + +FA V+SPTRELA QI E F+A
Sbjct: 50 GRDLIALAKTGSGKTGSFALPIIEALL------KNPAPYFAVVISPTRELASQIEEHFQA 103
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG GI L+ ++GG+D + Q L K PH++V TPGRL+ L N KGFSL +KYLVLD
Sbjct: 104 LGKGIGLKTVSVIGGIDEVTQMRMLAKTPHVIVGTPGRLLYMLQNMKGFSLRNIKYLVLD 163
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL++DFEK LD+IL V+PR RQT+LFSATMT KV+KLQRA L++P+K+E ASKYST
Sbjct: 164 EADRLLHEDFEKQLDQILEVLPRERQTFLFSATMTSKVQKLQRASLRDPIKVEVASKYST 223
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTLKQQY FVP +KD YL Y+L E++ ++T+VF TC + + ++LR+LG +A+ I
Sbjct: 224 VDTLKQQYMFVPHMHKDTYLAYLLNELAGNTTIVFCCTCSNAQRICIILRSLGFKALVIH 283
Query: 249 GHMSQSKRLGALNKFK 264
G MSQ+KRL ALN FK
Sbjct: 284 GQMSQNKRLAALNNFK 299
>gi|160331647|ref|XP_001712530.1| rrp3 [Hemiselmis andersenii]
gi|159765979|gb|ABW98205.1| rrp3 [Hemiselmis andersenii]
Length = 398
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 160/354 (45%), Positives = 231/354 (65%), Gaps = 6/354 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG AQTGSGKT A+ LPI+Q L++ ++T AFF+ +L P+RELA QI+ FEA
Sbjct: 39 GRDIIGYAQTGSGKTIAYLLPIIQNLVK----KKT--AFFSIILVPSRELAFQIASYFEA 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G+ ++ VLVGG++ Q L PHI++ TPGRL++HL + L+ LV+D
Sbjct: 93 FGNIFGIKIVVLVGGLENFSQKALLSLNPHILICTPGRLIEHLEKFLKNKIKKLEILVID 152
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRL DF+K I + +P+ +Q+ FSATM+ ++ LQ+ +KNPVKI+ KY
Sbjct: 153 EADRLFQLDFKKEFSIIFSELPKNKQSLFFSATMSLNLENLQKNNMKNPVKIQINRKYKV 212
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL+Q Y F+P K KDCY +Y+ E + SS +VF T L+ + LG A +
Sbjct: 213 VKTLQQNYIFIPQKLKDCYFIYLCNEFNGSSILVFVDTQKCAEKKTLLAKFLGFNAEYLH 272
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M+Q+KRL L KF+ G+ ILI TD+ASRGLDIP+VD+V+NYD+P +K+Y+HRVGRT
Sbjct: 273 GGMNQNKRLEILQKFRFGKIKILIATDLASRGLDIPNVDLVLNYDLPHLAKEYLHRVGRT 332
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
ARAG++G I++V QY++ +IE L+ +K + VL+L + V + K+
Sbjct: 333 ARAGKSGRTINIVTQYDIHLCQKIETLVQQKFILLNFKLAHVLILEQTVDKMKQ 386
>gi|270005640|gb|EFA02088.1| hypothetical protein TcasGA2_TC007723 [Tribolium castaneum]
Length = 447
Score = 313 bits (802), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 171/391 (43%), Positives = 243/391 (62%), Gaps = 19/391 (4%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D IG A+TGSGKT AFALPILQ L E FA +L+PTRELA QI++QF
Sbjct: 40 AGRDCIGAAKTGSGKTLAFALPILQKLCEDPY------GIFALILTPTRELAFQIADQFA 93
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
+G ++LR V+VGG+DM+ Q L ++PHIVVATPGRL DHL + F+ L++LVL
Sbjct: 94 VIGKVMNLRHCVIVGGMDMVVQGKDLARKPHIVVATPGRLADHLESCNTFNFNKLRFLVL 153
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADRLL F++ + I +P+ RQ FSAT+T ++KL+ K+ EA ++ +
Sbjct: 154 DEADRLLGGHFDEQIKTIFQALPKERQNLFFSATITDTLEKLKDVTGKDVFFYEAPAEVA 213
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSAS---STMVFTRTCDATRLLALMLRNLGQRA 244
TV+ L+Q Y P KD YLV + A+ + ++FT TC ++L++ L +G
Sbjct: 214 TVEQLEQNYVLCPKDVKDAYLVETIRTYRATNDGNILIFTNTCKNCQVLSMTLNEVGFEN 273
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
+ + M Q +RL AL KFK+ IL+ TDVASRGLDIP+V +VIN++IP K+YIHR
Sbjct: 274 VALHAMMKQQQRLAALAKFKSNTIKILLATDVASRGLDIPTVQLVINHNIPKIPKEYIHR 333
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRIS 364
VGRTARAGR G AISLV Y+++ IE+ I KL EF ++ EV + +++ K +
Sbjct: 334 VGRTARAGRNGKAISLVTPYDIKLLQAIEQHINTKLTEFKLDDSEVGKIFTQISVTKSEA 393
Query: 365 QMTIKDSG-------NKRRR---KGGDEDDD 385
+ + + NKR++ +G D D++
Sbjct: 394 YIKLDEQDFYEKKMINKRKKWMMEGLDPDEE 424
>gi|417401748|gb|JAA47742.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 483
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 184/410 (44%), Positives = 249/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ + +LV+D
Sbjct: 93 LGKPLGLKDCIIVGGMDMVTQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIHFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +++LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 213 VRTVEQLDQRYLLVPEKVKDAYLVHLIQNFQDEHEDWSIIIFTNTCKTCQVLCMMLRKFN 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I KKL EF EE EVL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQINKKLEEFVVEEAEVLQILTQVNVVR 392
Query: 362 RISQMTIKDSG-------NKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ ++ + NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEAANFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKNRR 442
>gi|170090862|ref|XP_001876653.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648146|gb|EDR12389.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 422
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 172/380 (45%), Positives = 236/380 (62%), Gaps = 23/380 (6%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG D IG A+TGSGKT AFALPILQ LL +A VL+PTRELA QISEQF
Sbjct: 36 AGTDCIGNAKTGSGKTIAFALPILQRLLADPY------GIYALVLTPTRELAFQISEQFV 89
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG-FSLGTLKYLV 126
LG+ ++LR AV+VGG+DMM Q L LG RPHIV+ATPGRL+DHL ++ G + L +++LV
Sbjct: 90 VLGASLNLRTAVIVGGMDMMAQALELGNRPHIVIATPGRLVDHLRSSSGEWDLSRVRFLV 149
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLK--------NPV 178
LDEADRLL F L + NV+P+ RQT LF+AT+T ++ L A + + +
Sbjct: 150 LDEADRLLTRTFSPELSHLFNVLPQDRQTCLFTATLTPSIESLADATARPGKQKPFVHRM 209
Query: 179 KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEV--------SASSTMVFTRTCDAT 230
+ TV TLKQ Y VP+ ++ YL Y+L T++F
Sbjct: 210 NERQVRRIETVSTLKQHYILVPSHVRETYLYYLLRNPPDDDDELEQPPPTIIFCARPRTA 269
Query: 231 RLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVI 290
L L+L++L R+ + ++Q +RL +L+ F+A +L+ TDV SRGLDI V MVI
Sbjct: 270 AYLTLVLKSLSIRSTALHSRLTQRERLSSLSLFRASVVPVLVSTDVGSRGLDIEDVAMVI 329
Query: 291 NYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEV 350
N+D+P +++Y HRVGRTARAGR GVAIS V + + + ++IEK I KL E E++V
Sbjct: 330 NWDMPEEAEEYTHRVGRTARAGRGGVAISFVTERDEDRVVKIEKRIKTKLEEMILSEDKV 389
Query: 351 LLLLERVTEAKRISQMTIKD 370
L L V+ AKR+++M++ D
Sbjct: 390 LEKLNAVSTAKRLAKMSLHD 409
>gi|330040429|ref|XP_003239908.1| DEAD box protein [Cryptomonas paramecium]
gi|327206834|gb|AEA39010.1| DEAD box protein [Cryptomonas paramecium]
Length = 396
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/353 (41%), Positives = 225/353 (63%), Gaps = 6/353 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
+D++G AQTGSGKT AF +PILQ+LL+ F++ V+ P+RELA Q++ E
Sbjct: 39 NRDILGYAQTGSGKTLAFVIPILQSLLKFQ------ITFYSFVIVPSRELAFQVASYIET 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+G ++ +L G++ Q + + PH+++ TPGRL+++ T L +K +V D
Sbjct: 93 IGYLFGIKIGLLTSGIEYATQISIIKRSPHMMICTPGRLIEYTEKTDNLFLKNIKKIVFD 152
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRL +DF+K ++ +P+ +Q++LFSATMT ++KL++ + NPVKI+ KY T
Sbjct: 153 EADRLFQNDFDKKFLSVVENLPKFKQSFLFSATMTINIEKLKKISMSNPVKIKINKKYKT 212
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y F+P K K+CYL YI E S ++F T +A++L+ L +
Sbjct: 213 VSTLVQNYIFMPFKSKNCYLSYICNEFSDCLAIIFVDTQICAEKIAVLLKVLNFKVAYFH 272
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQ KR L+ FK + IL+ TD+ASRG+DIP ++++INYDIP ++DYIHR+GRT
Sbjct: 273 GKLSQDKRAKILHDFKLKKIKILVSTDLASRGIDIPDIELIINYDIPLYTRDYIHRIGRT 332
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
ARAG+TG I+LV QY++ Y +IE L+ +KL EF +++L + +RV+ K
Sbjct: 333 ARAGKTGRVINLVTQYDISSYQKIEILLQRKLEEFKCNLKDILFISKRVSSVK 385
>gi|332374708|gb|AEE62495.1| unknown [Dendroctonus ponderosae]
Length = 470
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 166/366 (45%), Positives = 232/366 (63%), Gaps = 12/366 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GK IG A+TGSGKT AFALPI+Q L E +A VL+P RELA QI++QF
Sbjct: 43 GKTCIGAAKTGSGKTLAFALPIVQKLYEDPY------GIYALVLTPIRELAFQIADQFAI 96
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG +++R V+VGG+DM++Q L K PH+VVATPGRL+DHL F+L +K+LV+D
Sbjct: 97 LGKPMNMRTCVVVGGMDMVEQGRQLSKVPHVVVATPGRLVDHLEGCDTFTLSRIKFLVID 156
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE--AASKY 186
EADRLL F+ + I +V+P+ RQ+ FSATMT ++ L++ ++ E S+
Sbjct: 157 EADRLLGGLFDDQIKRIFSVLPKTRQSIYFSATMTDTLQTLKKLVAEDAFFYEDIGPSEA 216
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQ 242
TV L QQY PA KD YLV +L +E + M+FT TC +LL++ L +G
Sbjct: 217 VTVAGLTQQYMLCPAYVKDAYLVELLRIFISENDQGTVMIFTNTCKNCQLLSITLNEVGM 276
Query: 243 RAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYI 302
+ + + Q++RL ALN+FK+ ILI TDVASRGLDIP+V ++IN+++P K+Y+
Sbjct: 277 DNVALHAMIPQAQRLAALNRFKSNRVKILIATDVASRGLDIPNVQLIINHNVPRIPKEYV 336
Query: 303 HRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
HRVGRTARAGR G A++LV Y+L+ L IE+LI KL E ++EV + V+ K
Sbjct: 337 HRVGRTARAGRQGRAVTLVTPYDLKLLLAIEELIKTKLTECKVNDKEVAEIFTEVSVTKS 396
Query: 363 ISQMTI 368
+ M +
Sbjct: 397 EAYMKL 402
>gi|328720638|ref|XP_001950474.2| PREDICTED: probable ATP-dependent RNA helicase DDX49-like
[Acyrthosiphon pisum]
Length = 470
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 169/373 (45%), Positives = 229/373 (61%), Gaps = 10/373 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D IG A+TGSGKT AFALPILQ L E FA +L+PTRELA QI++QF
Sbjct: 38 GIDCIGCAKTGSGKTLAFALPILQKLWE------EPYGIFALILTPTRELAYQIADQFAV 91
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+G +LR V+ GG++M+ Q L +PHIVV+TPGRL DHL + FSL +++LVLD
Sbjct: 92 IGKPKNLRHCVVTGGMEMIVQARELSNKPHIVVSTPGRLADHLESCDTFSLKRIQFLVLD 151
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL F+K + I +P+ RQT LFSATMT ++K++ KN E+ ++ T
Sbjct: 152 EADRLLGGKFDKQIATIFKALPKERQTLLFSATMTDTLEKVKMITKKNTFVYESTAEVKT 211
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASS----TMVFTRTCDATRLLALMLRNLGQRA 244
VD L+Q Y P KD YLV I+ + M+FT TC +LL + L +G
Sbjct: 212 VDELEQFYVLCPYNVKDGYLVEIVRQFREKDEKGLIMIFTDTCKNCQLLHMTLNEVGFDT 271
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
+ + +SQ +RL L KFK+ ILI TDVASRGLDIP+V +VIN+ IP N+ DY+HR
Sbjct: 272 VSLHAMISQRQRLAGLAKFKSHVSKILIATDVASRGLDIPAVSLVINHIIPNNATDYVHR 331
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRIS 364
VGRTARAGR G A+S+V Q++++ IE I +L E+ V +L +V KR +
Sbjct: 332 VGRTARAGRQGRAVSIVTQHDIKLVKAIEAKINIRLKEYDVSGLHVAKILTQVHVTKREA 391
Query: 365 QMTIKDSGNKRRR 377
Q+ + ++ RR
Sbjct: 392 QIKLDETDFDERR 404
>gi|115473551|ref|NP_001060374.1| Os07g0633500 [Oryza sativa Japonica Group]
gi|75329662|sp|Q8L4E9.1|RH36_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 36
gi|22093824|dbj|BAC07111.1| DEAD box protein-like [Oryza sativa Japonica Group]
gi|22296386|dbj|BAC10155.1| DEAD box protein-like [Oryza sativa Japonica Group]
gi|113611910|dbj|BAF22288.1| Os07g0633500 [Oryza sativa Japonica Group]
gi|125601204|gb|EAZ40780.1| hypothetical protein OsJ_25257 [Oryza sativa Japonica Group]
Length = 501
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 163/372 (43%), Positives = 235/372 (63%), Gaps = 12/372 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D++G+A+TGSGKT AFALPIL L E+ V A L+PTRELA Q++EQF A
Sbjct: 114 GRDVLGIAETGSGKTAAFALPILHRL---GEDPYGVAAL---ALAPTRELAAQLAEQFRA 167
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLV 126
LG+ + LRC +GG D + Q L +RPH+VVATPGR+ + + + K+LV
Sbjct: 168 LGAPLGLRCLAAIGGFDSLGQAKGLARRPHVVVATPGRIATLINDDPDLAKVFARTKFLV 227
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
LDEADR+L+ +FE+ L I +P+ RQT+LFSAT++ ++ L N EA +
Sbjct: 228 LDEADRVLDINFEEDLRVIFGSLPKKRQTFLFSATISDNLRSLLELSGNNSYFFEAYEGF 287
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSAS---STMVFTRTCDATRLLALMLRNLGQR 243
TVDTLKQ Y VP K+ YL Y+L++++ S +VF TC + L +L LG
Sbjct: 288 KTVDTLKQLYIHVPPDAKELYLFYLLSKMNEDNIRSVIVFVSTCRTCQYLDFLLEELGHP 347
Query: 244 AIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIH 303
A+ + H QS+RL AL+ FK+ + +L+ TDVASRGLDI +VD+VINYD+P +DYIH
Sbjct: 348 AVSLHSHKPQSRRLAALHNFKSSKVPVLLATDVASRGLDIQTVDLVINYDVPRYPRDYIH 407
Query: 304 RVGRTARAGRTGVAISLV-NQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
RVGRTARA R G++IS + Q ++ +IE ++GK+L + E +V +V +A+R
Sbjct: 408 RVGRTARATRGGLSISFITTQRDIRLLHEIEDVVGKQLGAYDGEMRDVNKDATKVFKARR 467
Query: 363 ISQMTIKDSGNK 374
++ M + D G++
Sbjct: 468 LANMKMADEGHE 479
>gi|125559280|gb|EAZ04816.1| hypothetical protein OsI_26993 [Oryza sativa Indica Group]
Length = 501
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 163/372 (43%), Positives = 235/372 (63%), Gaps = 12/372 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D++G+A+TGSGKT AFALPIL L E+ V A L+PTRELA Q++EQF A
Sbjct: 114 GRDVLGIAETGSGKTAAFALPILHRL---GEDPYGVAAL---ALAPTRELAAQLAEQFRA 167
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLV 126
LG+ + LRC +GG D + Q L +RPH+VVATPGR+ + + + K+LV
Sbjct: 168 LGAPLGLRCLAAIGGFDSLGQAKGLARRPHVVVATPGRIATLINDDPDLAKVFARTKFLV 227
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
LDEADR+L+ +FE+ L I +P+ RQT+LFSAT++ ++ L N EA +
Sbjct: 228 LDEADRVLDINFEEDLRVIFGSLPKKRQTFLFSATISDNLRSLLELSGNNSYFFEAYEGF 287
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSAS---STMVFTRTCDATRLLALMLRNLGQR 243
TVDTLKQ Y VP K+ YL Y+L++++ S +VF TC + L +L LG
Sbjct: 288 KTVDTLKQLYIHVPPDAKELYLFYLLSKMNEDNIRSVIVFVSTCRTCQYLDFLLEELGHP 347
Query: 244 AIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIH 303
A+ + H QS+RL AL+ FK+ + +L+ TDVASRGLDI +VD+VINYD+P +DYIH
Sbjct: 348 AVSLHSHKPQSRRLAALHNFKSSKVPVLLATDVASRGLDIQTVDLVINYDVPRYPRDYIH 407
Query: 304 RVGRTARAGRTGVAISLV-NQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
RVGRTARA R G++IS + Q ++ +IE ++GK+L + E +V +V +A+R
Sbjct: 408 RVGRTARATRGGLSISFITTQRDIRLLHEIEDVVGKQLGAYDGEMRDVNKDATKVFKARR 467
Query: 363 ISQMTIKDSGNK 374
++ M + D G++
Sbjct: 468 LANMKMADEGHE 479
>gi|242005222|ref|XP_002423470.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212506558|gb|EEB10732.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 422
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 169/380 (44%), Positives = 232/380 (61%), Gaps = 17/380 (4%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D IG A+TGSGKT AFALPILQ L E FA VL+PTRELA QI EQF A
Sbjct: 40 GNDCIGCAKTGSGKTLAFALPILQKLSE------EPFGIFALVLTPTRELAFQIGEQFLA 93
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G I+L+ V+ GG+DM+ Q L KRPHIVV+TPGRL DHL + FSL +++LVLD
Sbjct: 94 YGKVINLKLCVISGGMDMVTQGQELSKRPHIVVSTPGRLADHLDSCNTFSLKKIRFLVLD 153
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ F+ + I +P +Q LFSAT+ +K+ + KN S +T
Sbjct: 154 EADRLLSGQFDDQISTIFKSLPLKKQILLFSATINDTLKQAEELLSKNVFSFIDKSDVAT 213
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
VD L+Q Y P KD YLV ++ + ++FT TC +LL++ L +G
Sbjct: 214 VDNLQQFYVLCPDHVKDAYLVEVIQLYRKNNENGNIIIFTDTCRNCQLLSMTLNEVGFEN 273
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
+ I M Q +RL AL++FK+ LI TD+ASRGLDIP+V++VIN+ IP KDYIHR
Sbjct: 274 VAIHSMMKQKERLAALSRFKSNIVKTLIATDIASRGLDIPTVELVINHSIPNVPKDYIHR 333
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRIS 364
VGRTARAGR G+++SLV +++ IE +I KL E+ ++EV+ +L +V KR +
Sbjct: 334 VGRTARAGRAGMSVSLVTPVDIKLIHAIESIINTKLKEYSINDKEVIKILTQVKVTKREA 393
Query: 365 QMTIKDSG-------NKRRR 377
++ + ++ NKR++
Sbjct: 394 EIKLDETDFYEKKMINKRKK 413
>gi|412990251|emb|CCO19569.1| ATP-dependent RNA helicase DBP8 [Bathycoccus prasinos]
Length = 420
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 160/359 (44%), Positives = 228/359 (63%), Gaps = 11/359 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IG +QTGSGKT FALPIL L + + FA ++PTRELA+QISEQF A
Sbjct: 46 GLDVIGTSQTGSGKTATFALPILHILSQDSY------GIFALCMTPTRELAVQISEQFSA 99
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGF--SLGTLKYLV 126
L +G++LRC V+ GG ++ QT ++ +RPHI+VATPGRLMDH N+ L++LV
Sbjct: 100 LSAGLTLRCQVITGGEEIQAQTRSILRRPHIIVATPGRLMDHFLNSPQVIGCFQNLRFLV 159
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
LDEADRLL FE L + IP RQT LFSA++T+ + LQ + + EA
Sbjct: 160 LDEADRLLEPSFESELRILFENIPSKRQTLLFSASITRNIAALQHITMNDAFHFEAFEGL 219
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTE---VSASSTMVFTRTCDATRLLALMLRNLGQR 243
V + +Q+Y F+P +D YL++IL + S+++FT T + +L+ +L LG
Sbjct: 220 KAVSSCRQEYCFLPRVMRDAYLLHILQQRENWDIRSSIIFTSTVRSCMILSGILDKLGIV 279
Query: 244 AIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIH 303
+ + Q +R + +FK+GE +IL+ TD+ASRGLDIP+VDMVINY++P SKDYIH
Sbjct: 280 TVSLHSMKKQKERKDSFARFKSGEVSILLATDIASRGLDIPTVDMVINYEVPIASKDYIH 339
Query: 304 RVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
R+GRTARAGR+G +I+LV Q++++ +IE I K+ EEE++ + V A+R
Sbjct: 340 RIGRTARAGRSGRSITLVTQHDVKIVQKIEDAIDSKMRCLSLPEEEIVKNMNSVGSARR 398
>gi|19074653|ref|NP_586159.1| putative ATP-DEPENDENT RNA HELICASE [Encephalitozoon cuniculi
GB-M1]
gi|74621115|sp|Q8SR63.1|RRP3_ENCCU RecName: Full=ATP-dependent rRNA helicase RRP3
gi|19069295|emb|CAD25763.1| putative ATP-DEPENDENT RNA HELICASE [Encephalitozoon cuniculi
GB-M1]
gi|449330220|gb|AGE96481.1| putative ATP-dependent RNA helicase [Encephalitozoon cuniculi]
Length = 400
Score = 307 bits (786), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 164/370 (44%), Positives = 228/370 (61%), Gaps = 7/370 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
G D+I ++QTGSGKT AF LPI+ LL+ +N+ +F+ V++PTREL+ QI+E F
Sbjct: 37 GGGDVIAVSQTGSGKTLAFVLPIVSHLLQ--KNR----SFYCLVVAPTRELSSQIAECFN 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
LR +LVGG + Q L KRPH+VV TPGR+ +H+ TK F ++ VL
Sbjct: 91 MF-QATGLRVCLLVGGANFNVQANQLSKRPHVVVGTPGRIAEHVLKTKSFRTERVRKFVL 149
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR DF + L+ I+ + RQT LF+ATM+ ++ KL + LK P I A KY
Sbjct: 150 DEADRFFEQDFVEDLETIIPSLREKRQTLLFTATMSDEISKLSSSILKRPKTIRTAEKYE 209
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV LK+ Y FV K+K+ LV +L S +VF C R+++L L LG + +
Sbjct: 210 TVPALKEYYLFVAMKWKNSALVELLEMSQGMSVIVFVSMCVTARVMSLALARLGFCSEAL 269
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQ KR A+ FK N+L+CTD+ SRGLDI VD+VIN+D+P + KDYIHRVGR
Sbjct: 270 HGELSQEKREEAMRSFKESRFNVLVCTDLGSRGLDISHVDLVINFDVPKSGKDYIHRVGR 329
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAGR+G AI+LV QY++E +IE + KKL EF ++ + R+ EA + +Q T
Sbjct: 330 TARAGRSGTAITLVTQYDVEQIQKIEFTLEKKLEEFKMMKKNFGTICARIEEAIQEAQET 389
Query: 368 IKDSGNKRRR 377
+K+ + RR
Sbjct: 390 LKEERKRNRR 399
>gi|336373626|gb|EGO01964.1| hypothetical protein SERLA73DRAFT_49383 [Serpula lacrymans var.
lacrymans S7.3]
Length = 474
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 177/410 (43%), Positives = 246/410 (60%), Gaps = 35/410 (8%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+G+D IG A+TGSGKT AFALPILQ L E FA VL+PTRELA QIS+QF
Sbjct: 77 SGRDCIGNAKTGSGKTIAFALPILQKLSEDPY------GIFALVLTPTRELAFQISDQFA 130
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG-FSLGTLKYLV 126
LG+G+S+R AV+VGG+DMM Q L L RPH+VVATPGR++DHL ++ G +SL +K+LV
Sbjct: 131 VLGAGLSIRTAVIVGGMDMMTQALELDNRPHVVVATPGRIVDHLRSSSGEWSLSRIKFLV 190
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKL----QRACLKNPVKIEA 182
LDEADRLL F L + +V+P+ RQT LF+AT+T + KL R + P
Sbjct: 191 LDEADRLLTPTFSPELSYLFDVLPKERQTCLFTATLTPSIDKLAEVPPRPGKQKPFIHRM 250
Query: 183 ASKYSTVDTLKQQYRFVPAKYKDCYLVYIL---TEVSAS--------STMVFTRTCDATR 231
+ TV TL Q + VP+ ++ YL ++L E++AS T++F
Sbjct: 251 NANIETVVTLNQNFVLVPSHVRETYLYHLLCNPPELAASLRQLVQPPPTIIFCTKPRTAA 310
Query: 232 LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVIN 291
L +L+ L R+ + ++Q +RL +L+ F++ +L+ TDV +RGLDI V MVIN
Sbjct: 311 YLTSLLKTLSIRSTALHSRLTQRERLTSLSLFRSSVIPVLVSTDVGARGLDIEDVAMVIN 370
Query: 292 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 351
+D+P ++Y HRVGRTARAG+ G+AIS V + + E L+IE IG KL E E +VL
Sbjct: 371 WDLPNEPEEYTHRVGRTARAGKAGIAISFVTEKDEERVLKIESRIGTKLAEMILPEGKVL 430
Query: 352 LLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKKLSKRK 401
L V+ AKR++ M + DS D G++ I+ K KR+
Sbjct: 431 EKLTSVSTAKRLANMELHDS-------------DFGKREEIHNIKKQKRR 467
>gi|354473856|ref|XP_003499148.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Cricetulus
griseus]
gi|344241323|gb|EGV97426.1| putative ATP-dependent RNA helicase DDX49 [Cricetulus griseus]
Length = 480
Score = 306 bits (785), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 181/410 (44%), Positives = 250/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ ++ +++LV+D
Sbjct: 93 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTLNMKKIRFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL IP RQT LFSAT+T +K+LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTADLETILAAIPVRRQTLLFSATLTDTLKELQGLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y VP K KD YLV+++ ++ S ++FT TC ++L +MLR L
Sbjct: 213 VRTVEQLDQRYLLVPEKVKDAYLVHLVQTFQNQLEDCSIIIFTNTCKTCQVLCMMLRKLS 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSVYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ +E+ I K+L E EE EVL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLLHAVEEQIKKQLEELVVEEAEVLNILTQVNVVR 392
Query: 362 RISQMTIKDSG-------NKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ ++ S NKR++ +G D D + R+ + K K ++
Sbjct: 393 RECEIKLEASHFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQQNKR 442
>gi|341882300|gb|EGT38235.1| hypothetical protein CAEBREN_08382 [Caenorhabditis brenneri]
Length = 554
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/416 (41%), Positives = 247/416 (59%), Gaps = 31/416 (7%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAF--FACVLSPTRELAIQISEQF 66
G D++G A+TG+GKT AFA+PILQ L +V + FA +L+PTRELA QI++QF
Sbjct: 117 GSDILGCARTGTGKTLAFAIPILQKL--------SVDPYGIFALILTPTRELAFQIADQF 168
Query: 67 EALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK--- 123
A+G I+L+C+V+VGG ++QQ L +RPHIVVATPGRL D + + + K
Sbjct: 169 VAVGKPITLKCSVIVGGRSLIQQARELSERPHIVVATPGRLADLIESDQDVIAKVFKKIQ 228
Query: 124 YLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-- 181
+ VLDEADR+L + L I IP+ RQT L SAT+T + L + + P E
Sbjct: 229 FFVLDEADRMLEGQYNDQLKPIFESIPQKRQTLLLSATITNNINMLHKVSTRKPYFFEDK 288
Query: 182 AASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSA----SSTMVFTRTCDATRLLALML 237
+ +TVD L+Q++ P KD YLVY++ S SS M+F +TC + LA M
Sbjct: 289 TNADETTVDRLEQKFVVCPVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMF 348
Query: 238 RNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTN 297
LG R + ++Q +RL AL+ F++ ++ICTDVASRGLDIP VD+V+N+++P
Sbjct: 349 EGLGFRVGSLHSQIAQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQC 408
Query: 298 SKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERV 357
K Y+HRVGR+ARAGR G A+S V QY++E +E+ IGKKL E + V + +V
Sbjct: 409 PKTYVHRVGRSARAGRFGSALSFVTQYDVELLQAVEQTIGKKLEELKVNAKHVTKYVTQV 468
Query: 358 TEAKRISQMTIKDS--GNKR---RRK----GGDEDDDIGRQFGINKKK---LSKRK 401
AKR +++ + + G K+ RRK G ++D+ R K + SKRK
Sbjct: 469 LVAKREAELKLDNQKFGEKKEINRRKELLMSGMSEEDVDRHMENMKTRRVTTSKRK 524
>gi|115532548|ref|NP_001040789.1| Protein H20J04.4, isoform b [Caenorhabditis elegans]
gi|351065690|emb|CCD61680.1| Protein H20J04.4, isoform b [Caenorhabditis elegans]
Length = 561
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 171/397 (43%), Positives = 239/397 (60%), Gaps = 29/397 (7%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAF--FACVLSPTRELAIQISEQF 66
G D++G A+TG+GKT AFA+PILQ L +V + +A +L+PTRELA QI+EQF
Sbjct: 126 GSDILGCARTGTGKTLAFAIPILQKL--------SVDPYGIYALILTPTRELAFQIAEQF 177
Query: 67 EALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHL---TNTKGFSLGTLK 123
ALG I+L+C+V+VGG ++ Q L +RPH+VVATPGRL D + +T ++
Sbjct: 178 TALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQ 237
Query: 124 YLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAA 183
+ VLDEADR+L + L I I RQT L SAT+T + L R + P E
Sbjct: 238 FFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATITNNINMLHRVSTRKPYFFEDK 297
Query: 184 SK--YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSA----SSTMVFTRTCDATRLLALML 237
K STVD L+Q+Y P KD YLVY++ S SS M+F +TC + LA M
Sbjct: 298 GKDDESTVDRLEQKYVVCPVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMF 357
Query: 238 RNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTN 297
LG R + + Q +RL AL+ F++ ++ICTDVASRGLDIP VD+V+N+++P
Sbjct: 358 EGLGFRVGSLHSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQC 417
Query: 298 SKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERV 357
K YIHRVGR+ARAGR G A+S V QY++E +E++IGKKL E + V + +V
Sbjct: 418 PKTYIHRVGRSARAGRFGSALSFVTQYDVELLQAVEQVIGKKLDELKVSPKHVTKYVTQV 477
Query: 358 TEAKRISQMTIKDS--GNKR---RRK-----GGDEDD 384
AK+ +++ +++ G K+ RRK G DED+
Sbjct: 478 LVAKKEAELKLENQKFGEKKEINRRKELLMSGMDEDE 514
>gi|341902886|gb|EGT58821.1| hypothetical protein CAEBREN_15104 [Caenorhabditis brenneri]
Length = 554
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 173/416 (41%), Positives = 247/416 (59%), Gaps = 31/416 (7%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAF--FACVLSPTRELAIQISEQF 66
G D++G A+TG+GKT AFA+PILQ L +V + FA +L+PTRELA QI++QF
Sbjct: 119 GSDILGCARTGTGKTLAFAIPILQKL--------SVDPYGIFALILTPTRELAFQIADQF 170
Query: 67 EALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK--- 123
A+G I+L+C+V+VGG ++QQ L +RPHIVVATPGRL D + + + K
Sbjct: 171 VAVGKPITLKCSVIVGGRSLIQQARELSERPHIVVATPGRLADLIESDQDVIAKVFKKIQ 230
Query: 124 YLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-- 181
+ VLDEADR+L + L I IP+ RQT L SAT+T + L + + P E
Sbjct: 231 FFVLDEADRMLEGQYNDQLKPIFESIPQKRQTLLLSATITNNINMLHKVSTRKPYFFEDK 290
Query: 182 AASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSA----SSTMVFTRTCDATRLLALML 237
+ +TVD L+Q++ P KD YLVY++ S SS M+F +TC + LA M
Sbjct: 291 TNADETTVDRLEQKFVVCPVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMF 350
Query: 238 RNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTN 297
LG R + ++Q +RL AL+ F++ ++ICTDVASRGLDIP VD+V+N+++P
Sbjct: 351 EGLGFRVGSLHSQIAQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQC 410
Query: 298 SKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERV 357
K Y+HRVGR+ARAGR G A+S V QY++E +E+ IGKKL E + V + +V
Sbjct: 411 PKTYVHRVGRSARAGRFGSALSFVTQYDVELLQAVEQTIGKKLEELKVNAKHVTKYVTQV 470
Query: 358 TEAKRISQMTIKDS--GNKR---RRK----GGDEDDDIGRQFGINKKK---LSKRK 401
AKR +++ + + G K+ RRK G ++D+ R K + SKRK
Sbjct: 471 LVAKREAELKLDNQKFGEKKEINRRKELLMSGMSEEDVDRHMENMKTRRVTTSKRK 526
>gi|268529640|ref|XP_002629946.1| Hypothetical protein CBG03667 [Caenorhabditis briggsae]
Length = 565
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 238/394 (60%), Gaps = 26/394 (6%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAF--FACVLSPTRELAIQISEQF 66
G D++G A+TG+GKT AFA+PILQ L ++ + +A +L+PTRELA QI++QF
Sbjct: 130 GSDILGCARTGTGKTLAFAIPILQKL--------SIDPYGIYALILTPTRELAFQIADQF 181
Query: 67 EALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLV 126
A+G I+L+C+V+VGG ++ Q L +RPHIVVATPGRL D + + +++ V
Sbjct: 182 TAVGKPITLKCSVIVGGRSLIHQARELSERPHIVVATPGRLTDLIESDPEVIAKKIQFFV 241
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK- 185
LDEADR+L + L I IP RQT L SAT+T+ + L + + P E K
Sbjct: 242 LDEADRMLEGQYNDQLKPIFQSIPEKRQTLLLSATITQNINTLHKVSTRKPYFFEDKGKD 301
Query: 186 -YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSA----SSTMVFTRTCDATRLLALMLRNL 240
+TVD L+Q++ P KD YLVY++ S SS M+F +TC + LA M L
Sbjct: 302 DETTVDRLEQKFVVCPVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGL 361
Query: 241 GQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKD 300
G R + + Q +RL AL+ F++ ++ICTDVASRGLDIP VD+V+N+++P K
Sbjct: 362 GFRVGSLHSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKT 421
Query: 301 YIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
YIHRVGR+ARAGR G A+S V QY++E +EK IGKKL E + V + +V A
Sbjct: 422 YIHRVGRSARAGRFGSALSFVTQYDVELLQAVEKTIGKKLDELKVSAKHVTKYVTQVLVA 481
Query: 361 KRISQMTIKDSG-------NKRRR---KGGDEDD 384
K+ +++ +++ N+R+ KG +E+D
Sbjct: 482 KKEAELKLENQKFGERKEINRRKEMLMKGMNEED 515
>gi|196002119|ref|XP_002110927.1| hypothetical protein TRIADDRAFT_21982 [Trichoplax adhaerens]
gi|190586878|gb|EDV26931.1| hypothetical protein TRIADDRAFT_21982 [Trichoplax adhaerens]
Length = 435
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 166/385 (43%), Positives = 239/385 (62%), Gaps = 21/385 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G++ IG A+TGSGKT AFALPILQ L + +A +L+PTRELA Q+++QF A
Sbjct: 42 GQNCIGCAKTGSGKTAAFALPILQNL------AKEPFGIYALILTPTRELAFQLADQFRA 95
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G I +R A+++GG+D++ Q++AL K+PHIV+ATPGRL D + N +K+LVLD
Sbjct: 96 FGKPIGMRDAIVIGGLDIISQSIALSKKPHIVIATPGRLADLIDNDSKVHFSKIKFLVLD 155
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQR-ACLKNPVKIEAASK-- 185
EADRLL F L +I ++P RQT LFSATMT + + Q A K P E
Sbjct: 156 EADRLLEASFGPDLGKIFEILPEDRQTLLFSATMTNAMARAQEVAASKKPFIYEDTDMKI 215
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSAS-------STMVFTRTCD-----ATRLL 233
+TV+ L Q Y +PA KDCY VY++ ++S + M+FT T + + ++L
Sbjct: 216 SATVEQLDQHYLLMPAVVKDCYFVYLIKQLSLELEKNPRWNMMIFTSTYNFSNRRSCQIL 275
Query: 234 ALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYD 293
A+ML L + M Q +RLG+L +FK G IL+ TDVASRGLDIP+V+ V+NY+
Sbjct: 276 AIMLSRLEFSCAALHSLMPQRQRLGSLARFKNGLLKILVATDVASRGLDIPTVEAVVNYN 335
Query: 294 IPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLL 353
+P ++ DYIHRVGRTARAG+ G+A++L+ QY++ IE KL ++ +E +VL L
Sbjct: 336 VPLSADDYIHRVGRTARAGKKGMAVTLMTQYDVNRIHNIETTTNVKLLKYEVDEHDVLKL 395
Query: 354 LERVTEAKRISQMTIKDSGNKRRRK 378
L VT ++ + +++S R R+
Sbjct: 396 LNIVTMLRKEIDVRLEESNFGRNRE 420
>gi|401839240|gb|EJT42545.1| RRP3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 404
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 155/285 (54%), Positives = 202/285 (70%), Gaps = 7/285 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLAQTGSGKT AFA+PIL L E ++AC+L+PTRELA QI E F++
Sbjct: 120 GHDIIGLAQTGSGKTAAFAIPILNRLWHDQE------PYYACILAPTRELAQQIKEAFDS 173
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R +VGG++MM Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+D
Sbjct: 174 LGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMD 233
Query: 129 EADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL +IP + R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 234 EADRLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQ 293
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL Q VP K+ YL+Y+L E + ++FTRT L+ + L A +
Sbjct: 294 TVDTLVQALMVVPGGLKNTYLIYLLNESIGKTMIIFTRTKANAERLSGLCNLLEFSATAL 353
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINY 292
G ++Q++R+GAL+ FKAG+ +IL+ TDVA+RGLDIPSVD+V+NY
Sbjct: 354 HGDLNQNQRMGALDLFKAGKRSILVATDVAARGLDIPSVDIVVNY 398
>gi|452819711|gb|EME26765.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 414
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 167/364 (45%), Positives = 238/364 (65%), Gaps = 12/364 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IG ++TG+GKT +F LPI+ L FA VL+PTRELA QI +QF+A
Sbjct: 50 GKDIIGSSETGTGKTMSFVLPIVDKL------SVDPCGVFAIVLTPTRELAFQIYDQFKA 103
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLT---NTKGFSLGTLKYL 125
+G+ +S+R AV+VGG++ ++Q L RPH+VVATPGRL D T + + F L ++++L
Sbjct: 104 IGNPMSIRVAVVVGGLESIRQATELENRPHVVVATPGRLADLFTIEDSVERFHLHSIRFL 163
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNP-VKIEAAS 184
VLDEADRLL D F SL IL+V+P RQT ++SATM K+++L + C + ++S
Sbjct: 164 VLDEADRLLEDGFASSLSTILDVLPVNRQTLVYSATMNDKMEQLSKTCRSECFIYTSSSS 223
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTE-VSASSTMVFTRTCDATRLLALMLRNLGQR 243
+YS V L+Q Y +P + K CYL Y+L + S ++FT +C + L L L LG
Sbjct: 224 RYSQVRELEQFYLLIPFQMKTCYLAYLLLYGFPSFSCIIFTGSCKRCQHLFLTLEYLGLN 283
Query: 244 AIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIH 303
+ M Q +RL A++ + G ILICTDVASRGLDIP V++V+NY IP+ YIH
Sbjct: 284 VGVLHSKMKQMERLKAIHNIQRGTIRILICTDVASRGLDIPQVELVVNYHIPSKPSTYIH 343
Query: 304 RVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEF-PAEEEEVLLLLERVTEAKR 362
RVGRTARAG G AISLV+Q+E+E + IE+ + ++L EF +E+EVL +L V +A+R
Sbjct: 344 RVGRTARAGNRGKAISLVSQFEVEIFRNIERRLERELVEFGHCKEKEVLKILTDVLKAER 403
Query: 363 ISQM 366
+++
Sbjct: 404 KAKL 407
>gi|308484167|ref|XP_003104284.1| hypothetical protein CRE_25008 [Caenorhabditis remanei]
gi|308258253|gb|EFP02206.1| hypothetical protein CRE_25008 [Caenorhabditis remanei]
Length = 572
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 164/379 (43%), Positives = 233/379 (61%), Gaps = 23/379 (6%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAF--FACVLSPTRELAIQISEQ 65
+G D++G A+TG+GKT AFA+PILQ L ++ + +A +L+PTRELA QI++Q
Sbjct: 76 SGSDILGCARTGTGKTLAFAIPILQKL--------SIDPYGIYALILTPTRELAFQIADQ 127
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGT---- 121
F A+G I+L+C+V+VGG ++ Q L RPHIVVATPGRL D L N+ +
Sbjct: 128 FSAVGKPITLKCSVIVGGRSLIHQARELSDRPHIVVATPGRLAD-LINSDAEIIAKVFKK 186
Query: 122 LKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE 181
+++ VLDEADR+L + L I IP RQT L SAT+T + L + + P E
Sbjct: 187 IQFFVLDEADRMLEGQYNDQLKPIFEAIPAKRQTLLLSATITNNINMLHKVSTRKPYFFE 246
Query: 182 AASK--YSTVDTLKQQYRFVPAKYKDCYLVYILTEVS----ASSTMVFTRTCDATRLLAL 235
SK STVD L+Q++ P KD YLVY++ S SS M+F +TC + LA
Sbjct: 247 DKSKDAESTVDRLEQKFVVCPVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAY 306
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
M LG R + + Q +RL AL+ F++ N++ICTDVASRGLDIP VD+V+N+++P
Sbjct: 307 MFEGLGFRVGSLHSQIPQKQRLAALSAFRSKTLNVIICTDVASRGLDIPHVDLVVNHNVP 366
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLE 355
+K YIHRVGR+ARAGR G A+S V QY++E +E+ IGKKL E + E
Sbjct: 367 QCAKTYIHRVGRSARAGRFGSALSFVTQYDVELLQAVEQTIGKKLEELKIQNSEK--FDS 424
Query: 356 RVTEAKRISQMTIKDSGNK 374
+ ++A++I++ K+S K
Sbjct: 425 KASKARQITRKIWKNSIQK 443
>gi|336386445|gb|EGO27591.1| hypothetical protein SERLADRAFT_360268 [Serpula lacrymans var.
lacrymans S7.9]
Length = 520
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 177/419 (42%), Positives = 246/419 (58%), Gaps = 44/419 (10%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+G+D IG A+TGSGKT AFALPILQ L E FA VL+PTRELA QIS+QF
Sbjct: 114 SGRDCIGNAKTGSGKTIAFALPILQKLSEDPY------GIFALVLTPTRELAFQISDQFA 167
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG-FSLGTLKYLV 126
LG+G+S+R AV+VGG+DMM Q L L RPH+VVATPGR++DHL ++ G +SL +K+LV
Sbjct: 168 VLGAGLSIRTAVIVGGMDMMTQALELDNRPHVVVATPGRIVDHLRSSSGEWSLSRIKFLV 227
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKL----QRACLKNPVKIEA 182
LDEADRLL F L + +V+P+ RQT LF+AT+T + KL R + P
Sbjct: 228 LDEADRLLTPTFSPELSYLFDVLPKERQTCLFTATLTPSIDKLAEVPPRPGKQKPFIHRM 287
Query: 183 ASKYSTVDTLKQQYRFVPAKYKDCYLVYIL---TEVSAS-----------------STMV 222
+ TV TL Q + VP+ ++ YL ++L E++AS T++
Sbjct: 288 NANIETVVTLNQNFVLVPSHVRETYLYHLLCNPPELAASLRRIPPDTEKRELVQPPPTII 347
Query: 223 FTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLD 282
F L +L+ L R+ + ++Q +RL +L+ F++ +L+ TDV +RGLD
Sbjct: 348 FCTKPRTAAYLTSLLKTLSIRSTALHSRLTQRERLTSLSLFRSSVIPVLVSTDVGARGLD 407
Query: 283 IPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPE 342
I V MVIN+D+P ++Y HRVGRTARAG+ G+AIS V + + E L+IE IG KL E
Sbjct: 408 IEDVAMVINWDLPNEPEEYTHRVGRTARAGKAGIAISFVTEKDEERVLKIESRIGTKLAE 467
Query: 343 FPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKKLSKRK 401
E +VL L V+ AKR++ M + DS D G++ I+ K KR+
Sbjct: 468 MILPEGKVLEKLTSVSTAKRLANMELHDS-------------DFGKREEIHNIKKQKRR 513
>gi|145342427|ref|XP_001416184.1| Ddx49-related DEAD box helicase superfamily II protein
[Ostreococcus lucimarinus CCE9901]
gi|144576409|gb|ABO94477.1| Ddx49-related DEAD box helicase superfamily II protein
[Ostreococcus lucimarinus CCE9901]
Length = 417
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/369 (44%), Positives = 232/369 (62%), Gaps = 11/369 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+A TGSGKT AFALP++ L + + V FA LSPTRELA QI+EQF
Sbjct: 39 GRDVIGIANTGSGKTAAFALPVVHVL---SVDPHGV---FALCLSPTRELAYQIAEQFAV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGF--SLGTLKYLV 126
G+SLRC V++GG D+++Q +L KRPHIVVATPGRL++H ++ LK+L+
Sbjct: 93 FSVGMSLRCEVVIGGEDLLRQASSLSKRPHIVVATPGRLLEHFMHSSDTIECFQRLKFLI 152
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
LDEADRLL+ FE L +L +P+ RQT +FSAT+T V L+ + E +
Sbjct: 153 LDEADRLLDSSFEAELRYLLTNLPQKRQTLMFSATITPSVIALKPLLGQRAFYYEEKGEL 212
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTE-VSASST--MVFTRTCDATRLLALMLRNLGQR 243
+T Q Y F+P K KD YLV++L E VS+ ST M+F T +++ ML NLG
Sbjct: 213 TTPTGCAQYYCFMPEKVKDTYLVHVLRELVSSKSTRAMIFCPTVQKCEMVSHMLHNLGIA 272
Query: 244 AIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIH 303
A + Q R LN FK+ IL+ TDVA+RGLD+P V++V+NYDIP++ + YIH
Sbjct: 273 ACSLHAAKKQRDRHSTLNAFKSTMVKILVATDVAARGLDLPDVELVVNYDIPSDPRQYIH 332
Query: 304 RVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRI 363
R+GRTAR TG AISLV QY++ +IEK +G +L EF +E +V L+ V ++++
Sbjct: 333 RIGRTARFHATGQAISLVTQYDVGKIKKIEKHLGHELEEFHVQEADVNKLVGEVFASRKM 392
Query: 364 SQMTIKDSG 372
+++ + G
Sbjct: 393 AKLHMASPG 401
>gi|396082239|gb|AFN83849.1| ATP-dependent RNA helicase [Encephalitozoon romaleae SJ-2008]
Length = 397
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 158/368 (42%), Positives = 223/368 (60%), Gaps = 7/368 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
G D+I ++QTGSGKT AF LPI+ LL +F+ +++PTREL+ QI+E F
Sbjct: 37 GGNDIIAVSQTGSGKTLAFVLPIVSCLL------LKDRSFYCLIIAPTRELSSQIAECFN 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
LR +LVGG Q L K PH+VV TPGR+ +H+ TK F + ++ LVL
Sbjct: 91 MFEE-TGLRVCLLVGGTSFNVQANQLSKHPHVVVGTPGRIAEHVLKTKSFRIERVRKLVL 149
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR DF L+ I+ + RQT LF+ATM+ ++ KL + L+NP I KY
Sbjct: 150 DEADRFFEQDFVDDLETIIRSLKEKRQTLLFTATMSDEISKLSNSILRNPKIIRVVEKYE 209
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TLK+ Y F+ K+K+ LV +L S +VF C R+++L L LG + +
Sbjct: 210 TVPTLKEYYIFIAMKWKNASLVELLEMNPGISVIVFVSMCITARVMSLALSKLGFHSEAL 269
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G + Q KR + FK + N+L+CTDV SRGLDI VD+VIN+D+P N KDYIHRVGR
Sbjct: 270 HGELIQEKREETMRMFKESKFNVLVCTDVGSRGLDISHVDLVINFDVPKNGKDYIHRVGR 329
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAGR+G AI+LV QY++E + ++E + K L EF +++ L +++ EA +Q
Sbjct: 330 TARAGRSGTAITLVTQYDVEQFQRMEFALKKSLEEFRPMKKDFGLTCKKIGEAIESAQEI 389
Query: 368 IKDSGNKR 375
+K+ N+R
Sbjct: 390 LKEERNRR 397
>gi|255070425|ref|XP_002507294.1| dead-box ATP-dependent RNA helicase [Micromonas sp. RCC299]
gi|226522569|gb|ACO68552.1| dead-box ATP-dependent RNA helicase [Micromonas sp. RCC299]
Length = 484
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/373 (44%), Positives = 229/373 (61%), Gaps = 13/373 (3%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D+IG+AQTG+GKT AFALPILQ L R F L+PTRELA QISEQF
Sbjct: 104 AGRDVIGVAQTGTGKTAAFALPILQIL------GREPYGIFCLCLTPTRELASQISEQFI 157
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYL 125
A +G++LRC + GG ++ Q AL RPHI VATPGRLMDH + + ++ L
Sbjct: 158 AFSAGMTLRCETVFGGENIRTQAKALMLRPHIAVATPGRLMDHFLHCSAVAKCFENVRCL 217
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRM-RQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
VLDEADRLL+ FE L I++ +P RQT +FSAT+TK + +Q L + EA
Sbjct: 218 VLDEADRLLDPGFEAELQAIMHNLPSANRQTLMFSATITKSISAVQELALGKALLFEALK 277
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEV---SASSTMVFTRTCDATRLLALMLRNLG 241
K++Y F+ + K+ YLV+IL S +VF T ++L +L LG
Sbjct: 278 DTQLAGRCKEEYCFIAPRVKEVYLVHILKRAPTWGTRSMIVFAGTVRKCQMLKEILSVLG 337
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + Q++R +L++FK+GE I+I TD+ASRGLDIP+VDMV+NYD+P +DY
Sbjct: 338 INCVALHAAKKQARRHASLSRFKSGEIQIMIATDIASRGLDIPTVDMVVNYDVPLIPRDY 397
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLL-LERVTEA 360
IHR+GRTARAGR G AI+LV Q+++ QIE+L +KL E EE +L + +V A
Sbjct: 398 IHRIGRTARAGRVGRAITLVTQHDISLVHQIEQLTCRKLVELSKLSEEAILKDMAQVFAA 457
Query: 361 KRISQMTIKDSGN 373
+RI+ + + +G
Sbjct: 458 RRIANLNMGAAGG 470
>gi|13161879|emb|CAC33024.1| hypothetical protein [Takifugu rubripes]
Length = 476
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 166/362 (45%), Positives = 224/362 (61%), Gaps = 15/362 (4%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D +G A+TGSGKT AF LP+LQ L E F VL+PTR LA QI+EQF
Sbjct: 39 GSDCMGCAKTGSGKTAAFVLPVLQKLSEDPY------GIFCLVLTPTRSLAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+ M+ Q L L +PH+VVATPGRL DH+ ++ FSL +++LV+D
Sbjct: 93 LGKPLGLKDCIIVGGMGMVTQALELSNQPHVVVATPGRLADHIRSSSTFSLAKIQFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF K L+ IL +P RQT LFSAT+T +++L+ + P E+ S+
Sbjct: 153 EADRLLEQGCTDFTKDLETILTAVPAKRQTLLFSATLTDTLQELKHIAMNKPFFWESKSE 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSAS----STMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y P K KD YLV+++ + S ++FT TC ++L +ML+
Sbjct: 213 CRTVEELDQRYILTPEKVKDAYLVHLIQTFTDQHDDWSIIIFTSTCKYCQILTMMLQKFH 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
I + M Q +R L KFKA ILI TDVA+R LDIP+V +VI + P K Y
Sbjct: 273 FPTISLHSMMKQVQRFANLAKFKASVYKILIATDVAARCLDIPTVQVVITNNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGK-KLPEFPAEEEEVLLLLERVTEA 360
IHRVGRTARAG GV+I+LV QY++ IE+ I + KL EFP EE+EVL +L +V
Sbjct: 333 IHRVGRTARAG-NGVSITLVTQYDIHLVHSIEEQIRETKLKEFPVEEKEVLKILTQVNVT 391
Query: 361 KR 362
+R
Sbjct: 392 RR 393
>gi|402591826|gb|EJW85755.1| Ddx49 protein [Wuchereria bancrofti]
Length = 461
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 166/398 (41%), Positives = 239/398 (60%), Gaps = 26/398 (6%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG D++G A+TG+GKT AF LPIL E+A + + A +L+PTRELA+QI +QF
Sbjct: 80 AGSDVLGCAKTGTGKTLAFGLPILH---ELALDPYGICAL---ILTPTRELAMQIGDQFA 133
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHL---TNTKGFSLGTLKY 124
ALG+ I L+ ++VGG D + Q+ L +RPHI+VATPGRL DHL + G L++
Sbjct: 134 ALGTSIGLKIGIIVGGKDRVAQSSDLARRPHIIVATPGRLADHLESDSENTGKLFEKLRF 193
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADRLL+ + L IL +P+ RQT LFSAT+T + +L + +K P E S
Sbjct: 194 LVLDEADRLLDGQYSVELKTILTFLPKQRQTLLFSATITSALSQLHQVSVKKPYFFEDKS 253
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSA----SSTMVFTRTCDATRLLALMLRNL 240
+ +TVD L+Q+Y P KD YLVY++ S ++F+ TC + LA+M L
Sbjct: 254 EIATVDKLEQKYVLCPCAVKDAYLVYVVKNFHEKHPESLILIFSHTCRECQALAIMFHGL 313
Query: 241 GQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKD 300
G + + +SQ +R +L KF++G ILICTDVASRGLDIP VD+V+N+++P N K
Sbjct: 314 GFKVGSLHSQISQQERTSSLTKFRSGRIKILICTDVASRGLDIPHVDLVVNHNVPQNPKT 373
Query: 301 YIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
YIHRVGR+ARAGR G A+ V QY++ ++ + + + L E E+ L + E
Sbjct: 374 YIHRVGRSARAGRFGCALLFVTQYDIYLLQEVTQYVTQVL--VTKREAEIKLDQQNFGER 431
Query: 361 KRISQMTIKDSGNKRRRK--GGDEDDDIGRQFGINKKK 396
K I NKR+ G + D++ R + +++
Sbjct: 432 KMI---------NKRKEMLIAGLDPDEVERTLKMQREQ 460
>gi|339243587|ref|XP_003377719.1| ATP-dependent RNA helicase DBP8 [Trichinella spiralis]
gi|316973448|gb|EFV57036.1| ATP-dependent RNA helicase DBP8 [Trichinella spiralis]
Length = 563
Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 166/394 (42%), Positives = 244/394 (61%), Gaps = 20/394 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD IG ++TG+GKT AFA+PI+Q L E +A VL+P+RELA QI EQF+
Sbjct: 142 GKDAIGCSKTGTGKTLAFAIPIIQRLSEDPY------GIYALVLTPSRELAFQIGEQFQV 195
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDH-LTNTKGFSLGTLKYLVL 127
LG + LR +++VGG DM++Q + +PHI++ATPGRL DH L+ + +K+ VL
Sbjct: 196 LGKPLGLRTSIVVGGRDMIEQANEIANQPHILIATPGRLADHILSRSDENWFHKIKFFVL 255
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADRLL+ ++ L+ I+ +P+ RQT LFSAT+T + +LQ +K P + S
Sbjct: 256 DEADRLLDGQYDLQLETIIEKLPKERQTLLFSATITDALCRLQELSVKKPFFWQEQSCTV 315
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVS----ASSTMVFTRTCDATRLLALMLRNLGQR 243
TVDTL+Q+Y P KD Y+ Y++ + SS ++F+ +C + L LM +LG +
Sbjct: 316 TVDTLEQRYVLCPKSVKDAYVTYVVKLFTDKNPQSSVLIFSHSCYECQALTLMFADLGFK 375
Query: 244 AIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIH 303
+ +SQ +RL + N FK+ + ILICTDVASRGLD+P VD+VIN++IP +K YIH
Sbjct: 376 VGALHSMISQRERLSSFNLFKSNQLKILICTDVASRGLDLPFVDLVINHNIPAVAKTYIH 435
Query: 304 RVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR- 362
RVGR+ARAGR+G A++ + QY++ IEK I ++ E +++V + V AKR
Sbjct: 436 RVGRSARAGRSGRAVTFITQYDIALLQAIEKAINCQMNELKVNDKKVSNYVTEVLVAKRE 495
Query: 363 -ISQMTIKDSGNKR---RRK----GGDEDDDIGR 388
I +M + G +R RRK G + +D+ R
Sbjct: 496 AILKMDEQHFGERRAINRRKEMILSGLDPEDVDR 529
>gi|303390992|ref|XP_003073726.1| ATP-dependent RNA helicase [Encephalitozoon intestinalis ATCC
50506]
gi|303302874|gb|ADM12366.1| ATP-dependent RNA helicase [Encephalitozoon intestinalis ATCC
50506]
Length = 400
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/370 (43%), Positives = 222/370 (60%), Gaps = 7/370 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
G D+I ++QTGSGKT AF LPI+ LL +N+ +FF V++PTREL+ QI+E F
Sbjct: 37 GGNDIIAVSQTGSGKTLAFVLPIVSRLL--LKNR----SFFCLVVAPTRELSSQIAECFN 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
GS LR +LVGG + Q L K PHIVV TPGR+ +H+ TK F ++ LVL
Sbjct: 91 MFGS-TGLRVCLLVGGTNFNLQANQLSKHPHIVVGTPGRIAEHILKTKSFKAERIRKLVL 149
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR DF + L+ I+ + RQT LF+ATM+ ++ KL + L P I Y
Sbjct: 150 DEADRFFEQDFVEDLETIIRSLREKRQTLLFTATMSNEISKLSSSILIKPKTIRVVEGYE 209
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV LK+ Y F K+K LV L +ST+VF C R+++L L LG + +
Sbjct: 210 TVSALKEYYFFTAMKWKSSALVEFLEMNPGASTIVFVSMCITARVMSLALSKLGFHSEAL 269
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQ KR + FK + ++L+CTDV SRGLDI VD+VIN+D+P + KDY+HRVGR
Sbjct: 270 YGELSQEKREETMRMFKENKFSVLVCTDVGSRGLDISHVDLVINFDVPKSGKDYVHRVGR 329
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAGR G AI+LV QY++E ++E ++ K L EF ++ + E+V E + +Q
Sbjct: 330 TARAGRAGTAITLVTQYDVEQLQRVEFVLKKSLEEFKPVKKNFESIREKVEETIQEAQEI 389
Query: 368 IKDSGNKRRR 377
+K + RR
Sbjct: 390 LKGERKRNRR 399
>gi|357618886|gb|EHJ71689.1| hypothetical protein KGM_12880 [Danaus plexippus]
Length = 533
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 164/378 (43%), Positives = 239/378 (63%), Gaps = 12/378 (3%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+G+D IG A+TGSGKT AFALPILQ L E FA VL+PT ELA QI++QF
Sbjct: 43 SGQDCIGAAKTGSGKTFAFALPILQNLAEDPY------GIFALVLTPTHELAYQIADQFL 96
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
LG + LR ++ GG D ++++L L KRPHIVVA PGRL DH++ FSL +KYLVL
Sbjct: 97 ILGQPLKLRVCIVTGGSDQLEESLKLAKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVL 156
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACL-KNPVKIEAASKY 186
DEADRL ++ F L+ I +P+ RQ LFSAT+T+ VK+ + L K+ + +
Sbjct: 157 DEADRLFSESFTGDLETIFEALPQKRQNLLFSATITEDVKESKVLSLNKDNLSTWCDTDT 216
Query: 187 S-TVDTLKQQYRFVPAKYKDCYLVYILTE----VSASSTMVFTRTCDATRLLALMLRNLG 241
+ TV TL Q+Y PA +D YLV L + +S +VFT T ++L++ML ++G
Sbjct: 217 TLTVSTLDQRYVVCPAYARDVYLVQTLRKYREGAPSSHVIVFTDTKKECQVLSMMLADIG 276
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + G M Q +R+ AL +F++ LI T+VA+RGLDIPSVD+V+N+ +P K+Y
Sbjct: 277 MDNVCLHGFMRQKERVSALAQFRSNLKCTLIATNVAARGLDIPSVDLVVNHKLPLEPKEY 336
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR+G+AIS++ Y++ +IE I KL E+ +++E + + V+ ++
Sbjct: 337 IHRVGRTARAGRSGMAISIITPYDILRLGEIEDEIRTKLSEYKIDDDEAVRVFTTVSVSR 396
Query: 362 RISQMTIKDSGNKRRRKG 379
R + I D+ + R++
Sbjct: 397 RTQEAAIDDTEFETRQRN 414
>gi|308159475|gb|EFO62004.1| ATP-dependent RNA helicase [Giardia lamblia P15]
Length = 449
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 159/380 (41%), Positives = 231/380 (60%), Gaps = 21/380 (5%)
Query: 11 DLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALG 70
D++G+A+TGSGKTGAFA+P LQ LLE N V VLSPTRELA+Q F LG
Sbjct: 42 DVVGVAETGSGKTGAFAIPALQDLLERGNN---VKGVHTVVLSPTRELAVQTFSVFRDLG 98
Query: 71 SGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEA 130
G LR +++GGVD+MQQ L ++PH+++ TPGRL+DHL T+GFSL +L++L++DEA
Sbjct: 99 KGFGLRTGLVIGGVDLMQQRKTLAQQPHVLICTPGRLVDHLATTEGFSLKSLRFLIIDEA 158
Query: 131 DRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRAC--------LKNPVKIEA 182
D++L D +++ + P+ R+T+LFSAT V+ LQ C ++ V +A
Sbjct: 159 DKMLEQDMGRAVLSLTKDCPQRRRTFLFSATFPSAVQALQNECTDRSRLVHIRVGVLTKA 218
Query: 183 A--------SKYSTVDT--LKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRL 232
A ++ + VD L + +P K LV +L + +VF
Sbjct: 219 APDVDGSTNTQLAVVDNEFLSHKMVVLPHSEKQLGLVVLLNNHATCQIIVFATKISTVTK 278
Query: 233 LALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINY 292
LALML LG + G MSQ KRL LN+F+ GE IL+ +DVA RG+DIP++D+VINY
Sbjct: 279 LALMLTTLGFEVGVVHGSMSQDKRLEELNRFRQGEHKILLASDVAGRGIDIPNIDLVINY 338
Query: 293 DIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL 352
D+P S+DY+HRVGRTARAGR G A+++V QY++ + +IE ++G K+ + + E
Sbjct: 339 DLPVASRDYVHRVGRTARAGRRGTALTVVTQYDVVNFKRIEAMLGIKMEPYTPDFSEAAG 398
Query: 353 LLERVTEAKRISQMTIKDSG 372
L +V EA R ++ + + G
Sbjct: 399 LRSQVEEAIRFAERSARSIG 418
>gi|358341811|dbj|GAA31574.2| ATP-dependent RNA helicase DDX47/RRP3 [Clonorchis sinensis]
Length = 464
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 165/378 (43%), Positives = 239/378 (63%), Gaps = 22/378 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++GLA+TGSGKT AFA+PILQ L+ ++ FA VL+PTRELA+Q+ QF
Sbjct: 52 GKDVVGLAETGSGKTAAFAIPILQDLISKPKHN------FALVLTPTRELALQLKSQFMD 105
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALG-KRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
LG LR LVGG + QT L + HI++ TPGR+ HL N+K L ++YLVL
Sbjct: 106 LGEVYGLRVICLVGGQHVEDQTRDLKVSKYHIIIGTPGRICYHLENSKDLRLNHIRYLVL 165
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEAD++L D FE L I+ +P +TYL+SAT++ KV+KLQ C ++P+ +E + +YS
Sbjct: 166 DEADQMLEDTFEDQLSAIIANLPPNHRTYLYSATLSPKVQKLQEICTRSPIIVEVSLEYS 225
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYIL---TEVSASSTMVFTRTCDATRLLA----LMLRNL 240
V L + F+P + +D YLVY L ++V+ S T+VFT T + +A + + L
Sbjct: 226 KVKKLDHAFVFIPEQERDVYLVYALKTISKVTNSRTIVFTTTWRESFRIASLLNSLSQLL 285
Query: 241 GQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP----- 295
G +A+P++G M Q KR +L F+AG+ L+ TD+ASRGLDIP VD++INYD+P
Sbjct: 286 GGKAVPLNGAMQQDKRQNSLFSFRAGQAAFLVATDLASRGLDIPDVDLIINYDVPRRPSW 345
Query: 296 -TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL--L 352
++K YIHRVGRTARAGR+G AI+LV Y IE +G+ +P+ P +
Sbjct: 346 SDSAKAYIHRVGRTARAGRSGRAITLVTPYSATRLKAIEAALGECIPQLPWPGMNCVGAD 405
Query: 353 LLERVTEAKRISQMTIKD 370
L E+++ A R ++ +I++
Sbjct: 406 LREQISAANRQARESIRE 423
>gi|401827655|ref|XP_003888120.1| ATP-dependent rRNA helicase [Encephalitozoon hellem ATCC 50504]
gi|392999320|gb|AFM99139.1| ATP-dependent rRNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 399
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 155/370 (41%), Positives = 226/370 (61%), Gaps = 7/370 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
G D+I ++QTGSGKT AF LPI+ LL ++N+ +F+ V++PTREL+ QI+E F
Sbjct: 37 GGSDIIAVSQTGSGKTLAFVLPIVSCLL--SKNR----SFYCLVIAPTRELSSQIAECF- 89
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
++ LR +LVGG Q L K PH++V TPGR+ +H+ TK F + ++ LVL
Sbjct: 90 SMFENTGLRVCLLVGGTSFNVQANQLSKHPHVIVGTPGRIAEHILKTKSFKIERVRKLVL 149
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR DF + L+ I+ + RQT LF+ATM+ ++ KL + L++P I KY
Sbjct: 150 DEADRFFEQDFVEDLETIIRSLREKRQTLLFTATMSDEISKLSNSILRSPKTIRVVEKYE 209
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TLK+ Y F+ K+K+ LV +L S +VF C R+++L L LG + +
Sbjct: 210 TVPTLKEYYLFIAMKWKNSALVELLEMNPGVSVIVFVSMCVTARVMSLALSRLGFHSEAL 269
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G + Q KR + FK + +IL+CTDV SRGLDI VD+VIN+D+P + KDY+HRVGR
Sbjct: 270 HGELIQEKREETMRMFKENKFSILVCTDVGSRGLDISHVDLVINFDVPKSGKDYVHRVGR 329
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAGR+G AI+LV QY++E ++E + K L EF +++ ++ EA +Q
Sbjct: 330 TARAGRSGTAITLVTQYDIEQLQRVEFALKKSLEEFGHIKKDFKSTYRKIEEAIESAQEI 389
Query: 368 IKDSGNKRRR 377
+K+ RR
Sbjct: 390 LKEEKRSNRR 399
>gi|19113586|ref|NP_596794.1| ATP-dependent RNA helicase Dbp8 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74654494|sp|Q9HGM5.1|DBP8_SCHPO RecName: Full=ATP-dependent RNA helicase dbp8
gi|9929273|emb|CAC05248.1| ATP-dependent RNA helicase Dbp8 (predicted) [Schizosaccharomyces
pombe]
Length = 453
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 167/388 (43%), Positives = 248/388 (63%), Gaps = 21/388 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G++ IG A+TGSGKT AFALPI++ + FA +L+PTRELAIQI EQF A
Sbjct: 44 GRNCIGGAKTGSGKTAAFALPIIEKW------SKDPSGIFALILTPTRELAIQIDEQFAA 97
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYL 125
LG+ ++L+ A++VGG+DM++Q++ L KRPH+VVATPGRL D + + ++ L K+L
Sbjct: 98 LGANLNLKHALIVGGMDMIRQSIDLSKRPHVVVATPGRLADLIRSNGEETIAGLRRIKFL 157
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRM--RQTYLFSATMTKKVKKLQRACLKN---PV-- 178
V+DEADRLL+ F LD+ +V+P RQT LF+AT+T +++L+ KN P+
Sbjct: 158 VMDEADRLLSPTFADDLDDCFSVLPASEDRQTLLFTATVTDAIRQLKYQPQKNNKPPLWL 217
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLAL 235
++E S TL+Q Y FV ++ ++ YLV++LT E + S ++F L+
Sbjct: 218 YEVET-DNISVPSTLQQSYIFVSSQVREAYLVHLLTIPENAKKSAIIFVNRTRTAELIYS 276
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
+LR L R + M Q +R+ +L +F+A IL+ TDVASRGLDIPSV +VIN+D+P
Sbjct: 277 ILRLLELRVTELHSEMVQRERINSLGRFRAEAAKILVATDVASRGLDIPSVQLVINFDLP 336
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFP-AEEEEVLLLL 354
+ DYIHRVGRTARAGR+G +IS+V + +++ IE +G KL E+ E ++L +
Sbjct: 337 RDPDDYIHRVGRTARAGRSGESISIVTERDVDLVHAIEDRVGTKLSEYEHVSENKMLEYI 396
Query: 355 ERVTEAKRISQMTIKDSGNKRRRKGGDE 382
+ VT+AKR + + + D G RR+ +E
Sbjct: 397 KEVTDAKRQASLEMIDRGFGERRQKRNE 424
>gi|115532546|ref|NP_001040788.1| Protein H20J04.4, isoform a [Caenorhabditis elegans]
gi|351065689|emb|CCD61679.1| Protein H20J04.4, isoform a [Caenorhabditis elegans]
Length = 488
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 158/346 (45%), Positives = 214/346 (61%), Gaps = 19/346 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAF--FACVLSPTRELAIQISEQF 66
G D++G A+TG+GKT AFA+PILQ L +V + +A +L+PTRELA QI+EQF
Sbjct: 126 GSDILGCARTGTGKTLAFAIPILQKL--------SVDPYGIYALILTPTRELAFQIAEQF 177
Query: 67 EALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHL---TNTKGFSLGTLK 123
ALG I+L+C+V+VGG ++ Q L +RPH+VVATPGRL D + +T ++
Sbjct: 178 TALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQ 237
Query: 124 YLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAA 183
+ VLDEADR+L + L I I RQT L SAT+T + L R + P E
Sbjct: 238 FFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATITNNINMLHRVSTRKPYFFEDK 297
Query: 184 SK--YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSA----SSTMVFTRTCDATRLLALML 237
K STVD L+Q+Y P KD YLVY++ S SS M+F +TC + LA M
Sbjct: 298 GKDDESTVDRLEQKYVVCPVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMF 357
Query: 238 RNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTN 297
LG R + + Q +RL AL+ F++ ++ICTDVASRGLDIP VD+V+N+++P
Sbjct: 358 EGLGFRVGSLHSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQC 417
Query: 298 SKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEF 343
K YIHRVGR+ARAGR G A+S V QY++E +E++IGKKL E
Sbjct: 418 PKTYIHRVGRSARAGRFGSALSFVTQYDVELLQAVEQVIGKKLDEL 463
>gi|159117282|ref|XP_001708861.1| ATP-dependent RNA helicase [Giardia lamblia ATCC 50803]
gi|157436975|gb|EDO81187.1| ATP-dependent RNA helicase [Giardia lamblia ATCC 50803]
Length = 450
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 160/380 (42%), Positives = 229/380 (60%), Gaps = 21/380 (5%)
Query: 11 DLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALG 70
D++G+A+TGSGKTGAFA+P LQ LLE N V VLSPTRELA+Q F LG
Sbjct: 42 DVVGVAETGSGKTGAFAIPALQDLLERGTN---VKGVHTVVLSPTRELAVQTFSVFRDLG 98
Query: 71 SGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEA 130
LR +++GGVD+MQQ L ++PH+++ TPGRL+DHL T+GFSL +L++L++DEA
Sbjct: 99 KDFGLRTGLVIGGVDLMQQRKTLAQQPHVLICTPGRLVDHLATTEGFSLKSLRFLIIDEA 158
Query: 131 DRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRAC--------LKNPVKIEA 182
D++L D +++ + P+ R+T+LFSAT V+ LQ C ++ V +A
Sbjct: 159 DKMLEQDMGRAVLNLAKDCPQRRRTFLFSATFPSAVQALQNECTDRSRLVHIQVGVLTKA 218
Query: 183 AS--------KYSTVDT--LKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRL 232
AS + + VD L + +P K LV +L +A MVF
Sbjct: 219 ASDVDGSTNTQLAVVDNELLSHKMVVLPHAEKQLGLVVLLNNHAACQIMVFATKISTVTK 278
Query: 233 LALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINY 292
LALML LG + G M Q KRL LN+F+ GE IL+ +DVA RG+DIP+VD+VINY
Sbjct: 279 LALMLTTLGFEVGVVHGSMGQDKRLEELNRFRQGEHKILLASDVAGRGIDIPNVDLVINY 338
Query: 293 DIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL 352
D+P S+DY+HR GRTARAGR G A+++V QY++ + +IE ++G ++ + + E
Sbjct: 339 DLPVASRDYVHRAGRTARAGRRGTALTIVTQYDVVNFKRIEAMLGIRMEPYTPDFSEAAG 398
Query: 353 LLERVTEAKRISQMTIKDSG 372
L +V EA R ++ T + G
Sbjct: 399 LRSQVEEAIRHAERTARSIG 418
>gi|254568340|ref|XP_002491280.1| Putative ATP-dependent RNA helicase of the DEAD-box family
[Komagataella pastoris GS115]
gi|238031077|emb|CAY69000.1| Putative ATP-dependent RNA helicase of the DEAD-box family
[Komagataella pastoris GS115]
gi|328352202|emb|CCA38601.1| ATP-dependent RNA helicase [Komagataella pastoris CBS 7435]
Length = 434
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 176/407 (43%), Positives = 248/407 (60%), Gaps = 30/407 (7%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG D IG A+TGSGKT AFA P+L + +E+ V F +L+PTRELA+QI+EQ+
Sbjct: 38 AGYDCIGGAKTGSGKTIAFAAPMLT---KWSEDPYGV---FGLILTPTRELALQIAEQYA 91
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KY 124
ALG+ ++++ +V++GG D++QQ L L +RPH VVATPGRL DH+ ++ ++G L K+
Sbjct: 92 ALGASMNIKVSVILGGGDIVQQALELQRRPHFVVATPGRLADHILSSGEETIGGLRKIKF 151
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACL---KNPV- 178
LVLDEADRLL++ F L+ V+P RQT LF+AT+T +V+ L+ + K PV
Sbjct: 152 LVLDEADRLLSNSFGSDLERCFKVLPPPEKRQTLLFTATVTDEVRALKEKPVPEGKLPVF 211
Query: 179 --KIEAASKYSTVDTLKQQYRFVPAKYKDCYL--VYILTEVSASSTMVFTRTCDATRLLA 234
++E+ K + TL Y F+P+ K+ YL V L E + S+ +VF LL
Sbjct: 212 VHEVESVDKVAIPATLTTNYLFIPSYVKEAYLNAVLALEENADSTVIVFVNRTQTAELLR 271
Query: 235 LMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDI 294
LRNL R + M Q +R+ +L++FKAG ILI TDVASRGLDIPSV++V+NYD+
Sbjct: 272 RTLRNLEFRVASLHSEMPQIERINSLHRFKAGAARILIATDVASRGLDIPSVELVVNYDM 331
Query: 295 PTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLL 354
P + DYIHRVGRTARAGR G ++S V + +++ L IE+ I KK+ ++
Sbjct: 332 PADPDDYIHRVGRTARAGRKGESLSFVTEQDVKRVLAIEERINKKMDKY----------- 380
Query: 355 ERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKKLSKRK 401
E VT+ K I K KR E + G + NK K +KRK
Sbjct: 381 ELVTDNKVIETSLHKTGAAKREALMAMEREGFGEKRKNNKIKNAKRK 427
>gi|308800454|ref|XP_003075008.1| Ddx49 Ddx49-related DEAD box helicase superfamily II protein (IC)
[Ostreococcus tauri]
gi|119358858|emb|CAL52279.2| Ddx49 Ddx49-related DEAD box helicase superfamily II protein (IC)
[Ostreococcus tauri]
Length = 419
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 164/371 (44%), Positives = 222/371 (59%), Gaps = 13/371 (3%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKD+IG+A TGSGKT AFALPI+ L R FA LSPTRELA QI++QF
Sbjct: 38 AGKDVIGIANTGSGKTAAFALPIVDML------SRDPYGIFALCLSPTRELANQIADQFT 91
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHL---TNTKGFSLGTLKY 124
G+G L C V+ GG D++QQ AL +RP+IVVATPGRL +H +NT + LK
Sbjct: 92 VFGAGTGLNCMVITGGEDLIQQATALSRRPNIVVATPGRLFEHFMHSSNTVQY-FSKLKC 150
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
L+LDEADRLL+ F L +++ +P+ RQT +FSAT+TK V LQ E S
Sbjct: 151 LILDEADRLLDSSFAAELKYLMSNLPQQRQTLMFSATITKSVTALQSMLGDAVFYYEDKS 210
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTE---VSASSTMVFTRTCDATRLLALMLRNLG 241
T Q Y F+P + KD LV ++ E V A T++FT T LL+ ML LG
Sbjct: 211 VKKTAVRCSQSYCFMPERIKDVNLVKLVRELALVEAKRTIIFTATIQKCELLSQMLTTLG 270
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + Q +RL +L FK G IL+ TDVA+RGLD+PSVDM++NYD+PT+ + Y
Sbjct: 271 IPSSSLHAAKKQKERLNSLGVFKNGTVQILVATDVAARGLDLPSVDMILNYDVPTDVRQY 330
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHR+GRTAR +G A++ V Q+++ IEK IG++L + E L+ V A+
Sbjct: 331 IHRIGRTARFEASGKAVTFVTQFDILKLKHIEKTIGQQLDSYELEGSSGAELVGEVFAAR 390
Query: 362 RISQMTIKDSG 372
R+++M + G
Sbjct: 391 RVAKMRMASPG 401
>gi|344230065|gb|EGV61950.1| DEAD-domain-containing protein [Candida tenuis ATCC 10573]
Length = 448
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 171/401 (42%), Positives = 243/401 (60%), Gaps = 25/401 (6%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD IG A+TGSGKT AF LP+L E + VL+PTRELA+QI+EQF A
Sbjct: 39 GKDCIGGAKTGSGKTIAFGLPMLHKWSE------DPFGVYGLVLTPTRELALQIAEQFSA 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYL 125
+GS +++R V+VGG DM++Q LA+ K+PH ++ATPGRL DH+ N+ ++ L K+L
Sbjct: 93 VGSSMNIRVKVIVGGEDMIEQALAIQKKPHFIIATPGRLADHILNSGEDTINGLRRIKFL 152
Query: 126 VLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACLKNPV-KIEA 182
VLDEADRLL++ F K LD I NV+P + RQT LF+AT+T V+ L+ K V +IE+
Sbjct: 153 VLDEADRLLSNSFGKDLDRIFNVLPDSKKRQTLLFTATVTDAVRSLKDKNDKVFVHEIES 212
Query: 183 ASKYSTVDTLKQQYRFVPAKYKDCYLVYILT-EVSASST-MVFTRTCDATRLLALMLRNL 240
K+ TL Y FVP+ K+ YL +L ++ ++F +L MLR L
Sbjct: 213 VDKFIIPSTLSLYYIFVPSYVKEAYLNEVLNLDIYKDKVGIIFVNRTKTAEMLRRMLRKL 272
Query: 241 GQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKD 300
R + M Q++R+ ++ +FKA ILI TDVASRGLDIP+V+ VIN+DIP + D
Sbjct: 273 EFRVTSLHSEMPQTERVNSIQRFKANAAKILIATDVASRGLDIPNVEFVINFDIPADPDD 332
Query: 301 YIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
++HRVGRTARAG+ G +I++V + ++E L IE+ I KL LLE +++
Sbjct: 333 FVHRVGRTARAGKKGDSITVVGEKDIERVLAIEERINDKLK-----------LLEDISDN 381
Query: 361 KRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKKLSKRK 401
K I S KR E+++ G + INK+K +R+
Sbjct: 382 KLIKDSLKSTSDAKRESLIEMENENFGERRQINKRKHIERE 422
>gi|294660132|ref|XP_462573.2| DEHA2G23782p [Debaryomyces hansenii CBS767]
gi|218512022|sp|Q6BGU8.2|DBP8_DEBHA RecName: Full=ATP-dependent RNA helicase DBP8
gi|199434486|emb|CAG91086.2| DEHA2G23782p [Debaryomyces hansenii CBS767]
Length = 441
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 178/406 (43%), Positives = 247/406 (60%), Gaps = 40/406 (9%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D IG A+TGSGKT AFA P+L E + VL+PTRELA+QI+EQF A
Sbjct: 38 GHDCIGGAKTGSGKTIAFAAPMLTQWSEDPS------GIYGLVLTPTRELALQIAEQFAA 91
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS---LGTLKYL 125
LGS ++++ +V+VGG D+++Q L L +RPH VVATPGRL DH+ N+ + L +KYL
Sbjct: 92 LGSSMNIKVSVIVGGEDIVKQALELQRRPHFVVATPGRLADHILNSGEDTVCGLRRVKYL 151
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRM--RQTYLFSATMTKKVKKLQRACL---KNPV-- 178
+LDEADRLL++ F L+ N++P RQT LF+AT+T V+ L+ + K PV
Sbjct: 152 ILDEADRLLSNSFGGDLERCFNILPSTDKRQTLLFTATVTDAVRALKDRPVPKGKLPVFI 211
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLAL 235
++E K + TL +Y FVP+ K+ YL IL + S S +++FT LL
Sbjct: 212 HEVETVDKVAIPSTLSVKYVFVPSYVKEAYLHSILNLPQYSDSLSIIFTNRTATAELLRR 271
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
LR L R + M Q++R +L++FKAG ILI TDVASRGLDIP+V++V+NYDIP
Sbjct: 272 TLRKLEFRVASLHSEMPQTERTNSLHRFKAGAAKILIATDVASRGLDIPTVELVVNYDIP 331
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLE 355
++ D+IHRVGRTARAGR G AIS+V + +++ L IE+ I KK+ L+E
Sbjct: 332 ADADDFIHRVGRTARAGRKGDAISIVAEKDVDRILAIEERINKKMD-----------LIE 380
Query: 356 RVTEAKRISQMTIKDSGNK----RRRKGGDED-DDIGRQFGINKKK 396
+++ K IKDS NK +R D D ++ G + INK K
Sbjct: 381 DISDNK-----VIKDSLNKTSVAKREAFMDMDRENFGEKRKINKSK 421
>gi|146161285|ref|XP_977099.2| Type III restriction enzyme, res subunit family protein
[Tetrahymena thermophila]
gi|146146797|gb|EAR86377.2| Type III restriction enzyme, res subunit family protein
[Tetrahymena thermophila SB210]
Length = 440
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 165/395 (41%), Positives = 228/395 (57%), Gaps = 14/395 (3%)
Query: 12 LIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALGS 71
+I A+TGSGKT FA PILQ L + FA VL+ RELA+QISEQF GS
Sbjct: 42 VIANAETGSGKTATFAFPILQDL------AKDPFGVFAIVLTANRELAMQISEQFTIFGS 95
Query: 72 GISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLVLDE 129
++LR + LVGGVD +Q L + PHIVV TPGR +D + + + +KYLVLDE
Sbjct: 96 SLNLRVSTLVGGVDFNKQLSELERIPHIVVGTPGRTLDMIDKSPVLKEYIENVKYLVLDE 155
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKV--KKLQRACLKNPVKIE---AAS 184
ADRL D + + IL IP+ +Q L +AT+ KKL LK VK E
Sbjct: 156 ADRLFEDSIIEDIQSILEFIPQEKQIILATATINDDFNDKKLNE-ILKTNVKFERFCVNQ 214
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
+ V TLKQ++ VP KD + +L + S ++F C + +L L +
Sbjct: 215 QKKVVQTLKQKFVLVPEMVKDQNFINLLNKFKGISMIIFVNKCRTCHFINALLNQLEFSS 274
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
+ + Q +R+ L FK+ NIL+ TDVASRGLDIP+VD+VINYDIP NS DYIHR
Sbjct: 275 TSLHSGLKQGQRISHLKTFKSQAANILVATDVASRGLDIPTVDLVINYDIPKNSDDYIHR 334
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRIS 364
VGRTAR G+ G+AIS++ QY+++ L IEK IG+KL E +EEE L + +V +AK+
Sbjct: 335 VGRTARKGKRGLAISIMTQYDVQLILNIEKNIGEKLEELKVDEEEALEIAPKVNKAKKFV 394
Query: 365 QMTIKDSGNKRRRKGGDEDDDIGRQFGINKKKLSK 399
++ + + G+ ++D ++F +KKL K
Sbjct: 395 KIKMSEDGSSENFDKQEQDKKSYKEFIREQKKLKK 429
>gi|256087842|ref|XP_002580072.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|350646373|emb|CCD58966.1| DEAD box ATP-dependent RNA helicase, putative [Schistosoma mansoni]
Length = 454
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 154/349 (44%), Positives = 218/349 (62%), Gaps = 20/349 (5%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
KD++GLA+TGSGKT AFA+PILQ LL + FA +L+PTRELA+Q+ F L
Sbjct: 42 KDIVGLAETGSGKTAAFAIPILQDLLSKPRHN------FALILTPTRELALQVKCLFMEL 95
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGK-RPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G L+ LVGG + Q L + + H++V TPGR++ HL NTK L ++Y VLD
Sbjct: 96 GDKFGLKVVCLVGGQHVEDQVRDLKRLKFHVIVGTPGRVVYHLENTKELRLNHVRYFVLD 155
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD++L D FE+ L I+ + +QT+L+SATMT+ V K+++ C K+PV +E +SKYS
Sbjct: 156 EADQMLEDTFEQQLAFIITKLHPNKQTFLYSATMTQNVDKIRKVCTKSPVILEVSSKYSK 215
Query: 189 VDTLKQQYRFVPAKYKDCYLVYIL---TEVSASSTMVFTRTCDATRLLALMLRNLGQ--- 242
VD L + F+P K KD YL+Y+L S +++FT T + + ML++L
Sbjct: 216 VDKLDHAFVFIPDKEKDFYLIYLLLSSKSADKSRSIIFTSTWRESFRIVAMLKSLADVIS 275
Query: 243 -RAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP------ 295
+ P++G M Q KR +L F+ G +IL+ TD+ASRGLD P VD+VINYD+P
Sbjct: 276 AASAPLNGVMQQDKRQSSLFDFRTGRVSILVATDLASRGLDFPDVDLVINYDVPRRPSWS 335
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFP 344
++K YIHRVGRTARAGR G AI+ V Y + IE + +++P+ P
Sbjct: 336 DSAKAYIHRVGRTARAGRHGRAITFVTPYSVTRLKAIESALNERIPQLP 384
>gi|390478768|ref|XP_003735574.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX49 [Callithrix jacchus]
Length = 480
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 173/410 (42%), Positives = 236/410 (57%), Gaps = 27/410 (6%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPYG------IFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LV+D
Sbjct: 93 LGKPLGLKDCIIVGGLDMVAQALELSRKPHVVIATPGRLADHLRSSTLFSIKKIRFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +++LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTVDLETILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
STV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 213 VSTVEQLDQRYLLVPEKVKDAYLVHLIQRFQDEHEDWSVIIFTNTCKTCQILCMMLRKFS 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASR + + P+ +
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRX----AAPLSPAQGTPSLPRST 328
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
RVGRTARAGR G AI+LV QY++ IE+ I KKL EF EE EVL +L +V +
Sbjct: 329 SRRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIQKKLEEFSVEEAEVLQILTQVNVVR 388
Query: 362 RISQMTI-------KDSGNKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ + K NKR++ +G D D R+ + K K R+
Sbjct: 389 RECEIKLEAAHFDEKKEINKRKQLILEGKDPDLXAKRKAELAKIKQKNRR 438
>gi|253745237|gb|EET01285.1| ATP-dependent RNA helicase [Giardia intestinalis ATCC 50581]
Length = 450
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 155/380 (40%), Positives = 226/380 (59%), Gaps = 21/380 (5%)
Query: 11 DLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALG 70
D++G+A+TGSGKTGAFA+P LQ LLE N V VLSPTRELA+Q F LG
Sbjct: 42 DVVGVAETGSGKTGAFAIPALQDLLERGNN---VKGVHTVVLSPTRELAVQTFSVFRDLG 98
Query: 71 SGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEA 130
LR +++GGVD+MQQ L ++PH ++ TPGRL DHL +T+GFSL ++++L++DEA
Sbjct: 99 KDFGLRTGLVIGGVDLMQQRKILAQQPHALICTPGRLADHLASTEGFSLKSIRFLIIDEA 158
Query: 131 DRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNP------------- 177
D++L D +++ ++ P+ R+T+LFSAT V+ LQ C
Sbjct: 159 DKMLEQDMGRAVLDLAKACPQRRRTFLFSATFPSAVQALQNECTDRSRLVHIRVGVLAKD 218
Query: 178 ---VKIEAASKYSTVDT--LKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRL 232
V A+++ + VD L + +P K LV +L + +VF
Sbjct: 219 APEVDGSASTQLAVVDNELLSHKMVVLPHAEKQLGLVVLLNNHATCQIIVFATKISTVTK 278
Query: 233 LALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINY 292
LALML LG + G M+Q KRL LN+F+ GE IL+ +DVA RG+DIP+VD+VINY
Sbjct: 279 LALMLTTLGFEVGVVHGSMAQDKRLEELNRFRQGEHKILLASDVAGRGIDIPNVDLVINY 338
Query: 293 DIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL 352
D+P S+DY+HR GRTARAGR G A+++V QY++ + +IE ++G ++ + + E
Sbjct: 339 DLPVASRDYVHRAGRTARAGRRGTALTIVTQYDVVNFKRIEAMLGIRMEPYNPDFGEAAG 398
Query: 353 LLERVTEAKRISQMTIKDSG 372
L +V EA R ++ T + G
Sbjct: 399 LRPQVEEAIRAAERTARGIG 418
>gi|225710224|gb|ACO10958.1| Probable ATP-dependent RNA helicase DDX49 [Caligus rogercresseyi]
Length = 454
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 157/363 (43%), Positives = 233/363 (64%), Gaps = 15/363 (4%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G++ IG+A+TGSGKT AFALPIL AL E +A VL+PTRELA QI++ F+
Sbjct: 36 GQNGIGIAKTGSGKTAAFALPILDALSEDPY------GIYALVLTPTRELAYQIADTFKI 89
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHL-TNTKGFSLGTLKYLVL 127
LG ++++ ++++GG DM+ Q L PHIV+ATPGRL DHL T+++ L +K+LV+
Sbjct: 90 LGKPLNVKVSIIIGGRDMVLQGSELASSPHIVIATPGRLADHLNTHSQSSPLKKIKFLVI 149
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPV----KIEAA 183
DEADRLL F++++ I IPR RQT LF+AT ++ +K+L A + + E
Sbjct: 150 DEADRLLEGGFDEAIGRIFASIPRSRQTLLFTATHSESLKELIVANSEKEHFYYREGEDD 209
Query: 184 SKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSA----SSTMVFTRTCDATRLLALMLRN 239
+ TV+TL Q Y PA ++D YL+ +L ++ +S ++F RTC ++L+L L
Sbjct: 210 ASGLTVNTLDQHYVLTPADFRDAYLIGVLMKIQKESPNASFIIFARTCKIAQILSLTLGK 269
Query: 240 LGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSK 299
LG + + Q +RL AL++F++ ILI TDVASRGLDIP V+ VIN++IPT +
Sbjct: 270 LGFSNVALHSMKPQRERLEALSRFRSHLAKILIATDVASRGLDIPHVEYVINHNIPTEAT 329
Query: 300 DYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTE 359
+Y+HRVGRTARAGR G AISL+ +++ IE+LIG KL E+ + + + ++ +V
Sbjct: 330 EYVHRVGRTARAGRRGTAISLLTPHDVLLLESIEELIGSKLSEYSVDTKNIFEIVVQVNV 389
Query: 360 AKR 362
+R
Sbjct: 390 TRR 392
>gi|68487950|ref|XP_712192.1| hypothetical protein CaO19.13973 [Candida albicans SC5314]
gi|68488947|ref|XP_711718.1| hypothetical protein CaO19.6652 [Candida albicans SC5314]
gi|74656119|sp|Q59PR3.1|DBP8_CANAL RecName: Full=ATP-dependent RNA helicase DBP8
gi|46433039|gb|EAK92496.1| hypothetical protein CaO19.6652 [Candida albicans SC5314]
gi|46433563|gb|EAK92999.1| hypothetical protein CaO19.13973 [Candida albicans SC5314]
gi|238880002|gb|EEQ43640.1| hypothetical protein CAWG_01884 [Candida albicans WO-1]
Length = 440
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 172/401 (42%), Positives = 242/401 (60%), Gaps = 30/401 (7%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D IG A+TGSGKT AFA P+L + +E+ + F +L+PTRELA+QI+EQF A
Sbjct: 38 GHDCIGGAKTGSGKTIAFAAPMLT---QWSEDPFGI---FGLILTPTRELALQIAEQFAA 91
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYL 125
LG+ ++++ AV+VGG D +QQTLAL ++PH V+ATPGRL DH+ N+ ++ L KYL
Sbjct: 92 LGANMNIKVAVVVGGEDFVQQTLALQRKPHFVIATPGRLADHILNSGEETISGLRRVKYL 151
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRM--RQTYLFSATMTKKVKKLQRACL---KNPV-- 178
VLDEADRLL++ F L +V+P RQT LF+AT+T V+ L+ K PV
Sbjct: 152 VLDEADRLLSNSFGSDLQRCFDVLPTSDKRQTLLFTATITDAVRALKEKPPTPGKPPVFM 211
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL--TEVSASSTMVFTRTCDATRLLAL 235
++E K + TL+ Y FVP+ K+ YL IL + S+ ++F +L
Sbjct: 212 HEVETVDKVAIPSTLQISYVFVPSYVKEAYLNSILHLEQFKDSTAVIFVNRTTTAEVLRR 271
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
MLR L R + M QS+R +L++FKAG ILI TDVASRGLDIP+V++VIN+DIP
Sbjct: 272 MLRKLDFRVASLHSEMPQSERTNSLHRFKAGAARILIATDVASRGLDIPTVELVINFDIP 331
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLE 355
+ D+IHRVGRTARAGR G A+S++ + +++ IE+ I KK+ LLE
Sbjct: 332 ADPDDFIHRVGRTARAGRKGDAVSIIGEKDIDRIQSIEERINKKME-----------LLE 380
Query: 356 RVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKK 396
V + I + S KR + ++ G + IN+KK
Sbjct: 381 DVNDDNVIKESLSATSVAKRESLMEMDKENFGERKKINRKK 421
>gi|225710312|gb|ACO11002.1| Probable ATP-dependent RNA helicase DDX49 [Caligus rogercresseyi]
Length = 454
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 157/372 (42%), Positives = 238/372 (63%), Gaps = 15/372 (4%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G++ IG+A+TGSGKT AFALPIL AL E +A VL+PTRELA QI++ F+
Sbjct: 36 GQNGIGIAKTGSGKTAAFALPILDALSEDPY------GIYALVLTPTRELAYQIADTFKI 89
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHL-TNTKGFSLGTLKYLVL 127
LG ++++ ++++GG DM+ Q L PHIV+ATPGRL DHL T+++ L +K+LV+
Sbjct: 90 LGKPLNVKVSIIIGGRDMVLQGSELASSPHIVIATPGRLADHLNTHSQSSPLKKIKFLVI 149
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPV----KIEAA 183
DEADRLL F++++ I IPR RQT LF+AT ++ +K+L A + + E
Sbjct: 150 DEADRLLEGGFDEAIGRIFASIPRSRQTLLFTATHSESLKELIVANSEKEHFYYREGEDD 209
Query: 184 SKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSA----SSTMVFTRTCDATRLLALMLRN 239
+ TV+TL Q Y PA ++D YL+ +L ++ +S ++F RTC ++L+L L
Sbjct: 210 ASGLTVNTLDQHYVLTPADFRDAYLIGVLMKIQKESPNASFIIFARTCKIAQILSLTLGK 269
Query: 240 LGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSK 299
LG + + Q +RL AL++F++ ILI TDVASRGLDIP V+ VIN++IPT +
Sbjct: 270 LGFSNVALHSMKPQRERLEALSRFRSHLAKILIATDVASRGLDIPHVEYVINHNIPTEAT 329
Query: 300 DYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTE 359
+Y+HRVGRTARAGR G AISL+ +++ IE+LIG KL E+ + + + ++ +V
Sbjct: 330 EYVHRVGRTARAGRRGTAISLLTPHDVLLLESIEELIGSKLSEYSVDTKNISEIVVQVNV 389
Query: 360 AKRISQMTIKDS 371
+R + + + ++
Sbjct: 390 TRRETDIRLAEA 401
>gi|241958758|ref|XP_002422098.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
gi|223645443|emb|CAX40099.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 440
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 172/401 (42%), Positives = 238/401 (59%), Gaps = 30/401 (7%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D IG A+TGSGKT AFA P+L E F +L+PTRELA+QI+EQF A
Sbjct: 38 GHDCIGGAKTGSGKTIAFAAPMLTRWSEDPF------GIFGLILTPTRELALQIAEQFAA 91
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYL 125
LG+ ++++ AV+VGG D +QQTLAL ++PH V+ATPGRL DH+ N+ ++ L KYL
Sbjct: 92 LGANMNIKVAVVVGGEDFVQQTLALQRKPHFVIATPGRLADHILNSGEETISGLRRVKYL 151
Query: 126 VLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACL---KNPV-- 178
VLDEADRLL++ F L +V+P RQT LF+AT+T V+ L+ K PV
Sbjct: 152 VLDEADRLLSNSFGSDLQRCFDVLPPSDKRQTLLFTATITDAVRALKEKPPTPGKPPVFM 211
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL--TEVSASSTMVFTRTCDATRLLAL 235
++E K + TL+ Y FVP+ K+ YL IL + S+ ++F +L
Sbjct: 212 HEVETVDKVAIPSTLQISYVFVPSYVKEAYLNSILHLEQFKDSTAVIFVNRTTTAEVLRR 271
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
MLR L R + M QS+R +L++FKAG ILI TDVASRGLDIP+V++VIN+DIP
Sbjct: 272 MLRKLDFRVASLHSEMPQSERTNSLHRFKAGAARILIATDVASRGLDIPTVELVINFDIP 331
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLE 355
+ D+IHRVGRTARAGR G A+S++ + +++ IE+ I KK+ LLE
Sbjct: 332 ADPDDFIHRVGRTARAGRKGDAVSIIGEKDIDRIQSIEERINKKME-----------LLE 380
Query: 356 RVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKK 396
V + I + S KR + ++ G + IN+KK
Sbjct: 381 DVNDDNVIKESLSATSVAKRESLMEMDKENFGERKKINRKK 421
>gi|195474915|ref|XP_002089735.1| GE19250 [Drosophila yakuba]
gi|194175836|gb|EDW89447.1| GE19250 [Drosophila yakuba]
Length = 527
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 165/374 (44%), Positives = 227/374 (60%), Gaps = 20/374 (5%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D IG A+TGSGKT AFALPIL+ L E + FA VL+PT ELA QISEQF
Sbjct: 43 AGQDCIGAAKTGSGKTFAFALPILERLSE------EPVSHFALVLTPTHELAYQISEQFL 96
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
G + +R V+ GG D M ++ L +RPHIVVA PGRL DHLT FS LKYLV+
Sbjct: 97 VAGQAMGVRVCVVSGGTDQMVESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVV 156
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKK-----LQRACLKNPVKIEA 182
DEADR+LN DF++SL I +P+ RQ FSATM +K+ + R C +
Sbjct: 157 DEADRMLNGDFDESLAIIERCLPKTRQNLFFSATMKDFIKESSIFPIARDCF----EWSQ 212
Query: 183 ASKYSTVDTLKQQYRFVPAKYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLR 238
S +TVDTL Q+Y +D L+ L E ++ M+FT T +LL++ L+
Sbjct: 213 DSDVATVDTLDQRYLLCADYDRDMVLIEALRKYREENENANVMIFTNTKKYCQLLSMTLK 272
Query: 239 NLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNS 298
N+ + + G M Q +R+ AL++FK+ + LI TDVA+RGLDIPSV++V+N+ +P
Sbjct: 273 NMDIDNVCLHGFMRQKERVAALSRFKSNQIRTLIATDVAARGLDIPSVELVMNHMLPRTP 332
Query: 299 KDYIHRVGRTARAGRTGVAISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERV 357
K+YIHRVGRTARAGR G++IS+ +LE IE+ I KL E P ++ V + +V
Sbjct: 333 KEYIHRVGRTARAGRKGMSISIFRFPRDLELLGAIEEEINTKLTEHPIDQRMVERIFMQV 392
Query: 358 TEAKRISQMTIKDS 371
+R S+M + ++
Sbjct: 393 NVTRRESEMQLDNN 406
>gi|354546093|emb|CCE42822.1| hypothetical protein CPAR2_204650 [Candida parapsilosis]
Length = 443
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 170/406 (41%), Positives = 246/406 (60%), Gaps = 30/406 (7%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT AFA P+L + +E+ + F VL+PTRELA+QI+EQ+ A
Sbjct: 41 GQDCIGGAKTGSGKTIAFAAPMLT---QWSEDPYGI---FGLVLTPTRELALQIAEQYTA 94
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YL 125
LG+ ++++ V+VGG D ++Q L L K+PH V+ATPGRL DH+ N+ ++ L+ YL
Sbjct: 95 LGAQMNIKVCVVVGGEDFVKQALELQKKPHFVIATPGRLADHILNSGEETISGLRRVRYL 154
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRM--RQTYLFSATMTKKVKKLQ---RACLKNPV-- 178
VLDEADRLL++ F L+ +V+P RQT LF+AT+T VK L+ R+ K PV
Sbjct: 155 VLDEADRLLSNSFSSDLERCFSVLPSSDRRQTLLFTATITDSVKALKEKPRSAGKLPVFM 214
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYL--VYILTEVSASSTMVFTRTCDATRLLAL 235
+++ K + TL +Y FVP+ K+ YL + +L + S+ +VF +L
Sbjct: 215 HEVDTVDKVAIPSTLSIEYVFVPSYVKEAYLHSILLLPKYKESTAVVFVNRTITAEVLRR 274
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
LR L R + M QS+R +L++FKAG ILI TDVASRGLDIP+V++V+N+DIP
Sbjct: 275 ALRKLDFRVASLHSEMPQSERTNSLHRFKAGAARILIATDVASRGLDIPTVELVVNFDIP 334
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLE 355
+ D+IHRVGRTARAGR G AIS++++ ++E IE+ I KK+ LLE
Sbjct: 335 ADPDDFIHRVGRTARAGRKGDAISIISEKDIERIQSIEERINKKME-----------LLE 383
Query: 356 RVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKKLSKRK 401
+ + K I + KR + + G + INK+K SK +
Sbjct: 384 EINDDKVIKDSLGAMTTAKRESMSEMDKEGFGERRKINKRKHSKEE 429
>gi|440803375|gb|ELR24281.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 335
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 147/213 (69%), Positives = 170/213 (79%), Gaps = 10/213 (4%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKTGAFA+PILQALL Q+ P FA VLSPTRELAIQI+EQFEA
Sbjct: 126 GKDIIGLAQTGSGKTGAFAIPILQALL-----QKPQP-LFAVVLSPTRELAIQIAEQFEA 179
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I R V+VGGVD+M+Q++AL K+PHI+ ATPGRL+ HL NTKGFSL +LKYLVLD
Sbjct: 180 LGSVIRARSVVIVGGVDVMEQSIALAKKPHIICATPGRLLFHLQNTKGFSLKSLKYLVLD 239
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLLN D+E+ +D+I P R TYLFSATMT KVKKL+RA L NPVKI +SKYST
Sbjct: 240 EADRLLNMDYEEEIDQIW---PE-RHTYLFSATMTSKVKKLERASLANPVKISVSSKYST 295
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTM 221
VDTL Q Y FVP K+KDCYLVY+L E +S +
Sbjct: 296 VDTLLQNYVFVPEKFKDCYLVYLLNEFVGNSII 328
>gi|195028030|ref|XP_001986885.1| GH21617 [Drosophila grimshawi]
gi|193902885|gb|EDW01752.1| GH21617 [Drosophila grimshawi]
Length = 524
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 175/396 (44%), Positives = 233/396 (58%), Gaps = 30/396 (7%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+GKD IG A+TGSGKT AFALPIL+ L E + FA VL+PT ELA QISEQF
Sbjct: 43 SGKDCIGAAKTGSGKTFAFALPILERLSE------EPVSHFALVLTPTHELAYQISEQFL 96
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
G + +R V+ GG D M ++ L +RPHIVVA PGRL DHLT FS LKYLV+
Sbjct: 97 VAGQAMGVRVCVVSGGTDQMIESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVV 156
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKK-----LQRACLKNPVKIEA 182
DEADR+LN DF++SL I +P+ RQ FSATM +K+ + + CL +
Sbjct: 157 DEADRMLNGDFDESLAIIERCLPKSRQNLFFSATMKDFMKESSIFPIAKDCL----EWSQ 212
Query: 183 ASKYSTVDTLKQQYRFVPAKYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLR 238
S +TVDTL Q+Y +D LV L E S+ M+FT T +LL++ L
Sbjct: 213 DSDVATVDTLDQRYLLCADYDRDMVLVESLRKYREENENSNVMIFTNTKKYCQLLSMTLA 272
Query: 239 NLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNS 298
N+ + + G M Q +R+ AL++FK+ LI TDVA+RGLDIPSV +VIN+ +P
Sbjct: 273 NMEIENVCLHGFMRQKERVAALSRFKSNHIRTLIATDVAARGLDIPSVQLVINHMLPRTP 332
Query: 299 KDYIHRVGRTARAGRTGVAISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERV 357
K+YIHRVGRTARAGR G+AIS+ +LE IE I KL E P ++ V + +V
Sbjct: 333 KEYIHRVGRTARAGRKGLAISIFRFPRDLELLGAIEAEINTKLTEHPIDQRMVERIFMQV 392
Query: 358 TEAKRISQMTIKDSG------NKRRR----KGGDED 383
++R S+M + ++ N RR+ +G D D
Sbjct: 393 NVSRRESEMQLDNNDFDERAQNYRRKTWIMEGKDPD 428
>gi|448103925|ref|XP_004200160.1| Piso0_002734 [Millerozyma farinosa CBS 7064]
gi|359381582|emb|CCE82041.1| Piso0_002734 [Millerozyma farinosa CBS 7064]
Length = 437
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 173/402 (43%), Positives = 243/402 (60%), Gaps = 32/402 (7%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D IG A+TGSGKT AFA PIL E + VL+PTRELA+QI+EQF A
Sbjct: 38 GHDCIGGAKTGSGKTIAFASPILTKWSEDPY------GIYGLVLTPTRELALQIAEQFAA 91
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYL 125
LG+ ++++ V+VGG D+++Q L L +RPHIV+ATPGRL DH+ N+ ++ L KYL
Sbjct: 92 LGATMNIKVCVIVGGDDIVKQALELQRRPHIVIATPGRLADHILNSGEDTICGLRRVKYL 151
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPR--MRQTYLFSATMTKKVKKLQRACL---KNPV-- 178
VLDEADRLL++ F L+ V+P+ RQT LF+AT+T V+ L+ + K PV
Sbjct: 152 VLDEADRLLSNSFGSDLERCFGVLPKPENRQTLLFTATITDAVRSLKEKPVPEGKLPVFV 211
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLAL 235
+++ + TL +Y FVP+ K+ YL +LT E ++T++F LL
Sbjct: 212 NEVDTVENIAIPSTLSIKYLFVPSYVKEAYLHNLLTLPEYEKTTTIIFVNRTHTAELLRR 271
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
MLR L R + M QS+R+ +L++FKA ILI TDVASRGLDIP V++V+NYDIP
Sbjct: 272 MLRKLDFRVASLHSEMPQSERVNSLHRFKANAARILIATDVASRGLDIPDVNLVVNYDIP 331
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLE 355
+ D+IHRVGRTARAGR G +IS+V + ++ L IE+ I KK+ + +E
Sbjct: 332 ADPDDFIHRVGRTARAGRKGDSISIVAEKDVNRILAIEERINKKMEK-----------ME 380
Query: 356 RVTEAKRISQMTIKDSGNKRRRKGGDEDDD-IGRQFGINKKK 396
VT+ K I + ++K++ +R D D D G + NK K
Sbjct: 381 DVTDNKVIKK-SLKETSVAKREAMMDMDKDGFGEKRRTNKMK 421
>gi|195455578|ref|XP_002074783.1| GK23245 [Drosophila willistoni]
gi|194170868|gb|EDW85769.1| GK23245 [Drosophila willistoni]
Length = 506
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 171/392 (43%), Positives = 231/392 (58%), Gaps = 22/392 (5%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+G+D IG A+TGSGKT AFALPIL+ L E + FA VL+PT ELA QISEQF
Sbjct: 43 SGQDCIGAAKTGSGKTFAFALPILEKLSE------EPVSHFALVLTPTHELAYQISEQFL 96
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
G + +R V+ GG D M ++ L +RPHIVVA PGRL DHLT FS LKYLV+
Sbjct: 97 VAGQPMGVRVCVVSGGTDQMIESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVV 156
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNP-VKIEAASKY 186
DEADR+LN DF+ SL I +P+ RQ FSATM +K + N + S+
Sbjct: 157 DEADRMLNGDFDASLAIIEKSLPKARQNLFFSATMKDFIKDSSIFPIANECFEWSEESQV 216
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQ 242
+TVDTL Q+Y +D L+ L E S+ M+FT T +LL++ L+NL
Sbjct: 217 ATVDTLDQRYLLCADYDRDMVLIEALRKYRDENPNSNVMIFTNTKKYCQLLSMTLQNLDI 276
Query: 243 RAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYI 302
+ + G M Q +R+ A+++FK+ LI TDVA+RGLDIPSV +VIN+ +P K+YI
Sbjct: 277 ENVCLHGFMRQKERVAAISRFKSNHIRTLIATDVAARGLDIPSVQLVINHMLPRTPKEYI 336
Query: 303 HRVGRTARAGRTGVAISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
HRVGRTARAGR+G++IS+ +LE IE I KL E P ++ V + +V +
Sbjct: 337 HRVGRTARAGRSGMSISIFRFPRDLELLGSIEDEINTKLQEHPIDQRMVERIFMQVNVTR 396
Query: 362 RISQMTIKDSG------NKRRR----KGGDED 383
R S+M + ++ N RR+ +G D D
Sbjct: 397 RESEMKLDNNDFDERAQNYRRKTWIIEGKDPD 428
>gi|198458635|ref|XP_001361114.2| GA11795 [Drosophila pseudoobscura pseudoobscura]
gi|198136412|gb|EAL25690.2| GA11795 [Drosophila pseudoobscura pseudoobscura]
Length = 527
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 173/393 (44%), Positives = 233/393 (59%), Gaps = 22/393 (5%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+GKD IG AQTGSGKT AFALPIL+ L E + FA VL+PT ELA QISEQF
Sbjct: 43 SGKDCIGAAQTGSGKTFAFALPILERLSE------EPVSHFALVLTPTHELAYQISEQFL 96
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
G + +R V+ GG D M ++ L +RPHIVVA PGRL DHLT FS LKYLV+
Sbjct: 97 VAGQPMGVRVCVVSGGTDQMIESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVV 156
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACL-KNPVKIEAASKY 186
DEADR+LN DF++SL I +P RQ FSATM +K+ + K+ ++ S
Sbjct: 157 DEADRMLNGDFDESLAIIERCLPSTRQNLFFSATMKDFMKESSIFPISKDCIEWSQDSNV 216
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQ 242
+TVDTL Q+Y +D L+ L E S+ M+FT T +LL++ L+++
Sbjct: 217 ATVDTLDQRYLLCADYDRDMVLIESLRKYREENENSNVMIFTNTKKYCQLLSMTLKSMDI 276
Query: 243 RAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYI 302
+ + G M Q +R+ AL++FK+ LI TDVASRGLDIPSV +VIN+ +P K+YI
Sbjct: 277 DNVCLHGFMRQKERVAALSRFKSNHIRTLIATDVASRGLDIPSVQLVINHMLPRTPKEYI 336
Query: 303 HRVGRTARAGRTGVAISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
HRVGRTARAGR G++IS+ +LE IE I KL E P ++ V + +V +
Sbjct: 337 HRVGRTARAGRKGMSISIFRFPRDLELLGAIETEINTKLTEHPIDQRMVERIFMQVNVTR 396
Query: 362 RISQMTIKDSG------NKRRR----KGGDEDD 384
R S+M + ++ N RR+ +G D D+
Sbjct: 397 RESEMQLDNNDFDERAQNYRRKTWIMEGKDPDE 429
>gi|195154715|ref|XP_002018267.1| GL17616 [Drosophila persimilis]
gi|194114063|gb|EDW36106.1| GL17616 [Drosophila persimilis]
Length = 527
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 173/393 (44%), Positives = 233/393 (59%), Gaps = 22/393 (5%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+GKD IG AQTGSGKT AFALPIL+ L E + FA VL+PT ELA QISEQF
Sbjct: 43 SGKDCIGAAQTGSGKTFAFALPILERLSE------EPVSHFALVLTPTHELAYQISEQFL 96
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
G + +R V+ GG D M ++ L +RPHIVVA PGRL DHLT FS LKYLV+
Sbjct: 97 VAGQPMGVRVCVVSGGTDQMIESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVV 156
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACL-KNPVKIEAASKY 186
DEADR+LN DF++SL I +P RQ FSATM +K+ + K+ ++ S
Sbjct: 157 DEADRMLNGDFDESLAIIERCLPSTRQNLFFSATMKDFMKESSIFPISKDCIEWSQDSNV 216
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQ 242
+TVDTL Q+Y +D L+ L E S+ M+FT T +LL++ L+++
Sbjct: 217 ATVDTLDQRYLLCADYDRDMVLIESLRKYREENENSNVMIFTNTKKYCQLLSMTLKSMDI 276
Query: 243 RAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYI 302
+ + G M Q +R+ AL++FK+ LI TDVASRGLDIPSV +VIN+ +P K+YI
Sbjct: 277 DNVCLHGFMRQKERVAALSRFKSNHIRTLIATDVASRGLDIPSVQLVINHMLPRTPKEYI 336
Query: 303 HRVGRTARAGRTGVAISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
HRVGRTARAGR G++IS+ +LE IE I KL E P ++ V + +V +
Sbjct: 337 HRVGRTARAGRKGMSISIFRFPRDLELLGAIETEINTKLTEHPIDQRMVERIFMQVNVTR 396
Query: 362 RISQMTIKDSG------NKRRR----KGGDEDD 384
R S+M + ++ N RR+ +G D D+
Sbjct: 397 RESEMQLDNNDFDERAQNYRRKTWIMEGKDPDE 429
>gi|378754810|gb|EHY64839.1| hypothetical protein NERG_02242 [Nematocida sp. 1 ERTm2]
Length = 421
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/363 (38%), Positives = 225/363 (61%), Gaps = 7/363 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+ ++ ++ TG+GKT A+ LPI+ LL+ + F+A V+ PTREL+ Q+ +
Sbjct: 44 QSILAISNTGTGKTLAYLLPIMHTLLQDDK------YFYAMVILPTRELSQQVHAVLADI 97
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
G+ I LR ++L+G D++ Q +L RPHIV+ TPGR+ HL NTKG S+ + KYLVLDE
Sbjct: 98 GAEIGLRTSLLIGATDLLSQGKSLAARPHIVIGTPGRINHHLRNTKGISVSSFKYLVLDE 157
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
DRLL++DF+ ++ IL +I + T+LFSAT+TK+V + + NP+
Sbjct: 158 CDRLLDNDFDGDINNILEMISP-KYTFLFSATLTKRVNAFKEKRMNNPLLYNVQKDEGIP 216
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
+ + QQY ++P KYK+ YL I+ + + +VF +TC + +LR LG+ I G
Sbjct: 217 ENILQQYIYLPQKYKEMYLYSIVHNLGSRKCIVFVKTCITAERIERILRFLGESVCSIHG 276
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+ +Q R + F+ G+ +ILI TDV +RG+D+ + ++INYD+P K+YIHR+GRT
Sbjct: 277 NKTQDIRTETIEMFRRGKHSILISTDVVARGMDMDGIKVIINYDMPDGHKEYIHRIGRTG 336
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK 369
RAG G +I+LV QY+++ + ++E + KK+ E+ E + L++ V +AKR + M +K
Sbjct: 337 RAGEVGSSITLVTQYDVDDFRKLEVKLNKKMDEYSVSSELIYSLVDSVDQAKREAAMDMK 396
Query: 370 DSG 372
+ G
Sbjct: 397 EEG 399
>gi|194863293|ref|XP_001970368.1| GG23409 [Drosophila erecta]
gi|190662235|gb|EDV59427.1| GG23409 [Drosophila erecta]
Length = 526
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 164/374 (43%), Positives = 227/374 (60%), Gaps = 20/374 (5%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D IG A+TGSGKT AFALPIL+ L E + FA VL+PT ELA QISEQF
Sbjct: 43 AGQDCIGAAKTGSGKTFAFALPILERLSE------EPVSHFALVLTPTHELAYQISEQFL 96
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
G + +R V+ GG D M ++ L +RPHIVVA PGRL DHLT FS LKYLV+
Sbjct: 97 VAGQAMGVRVCVVSGGTDQMVESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVV 156
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKK-----LQRACLKNPVKIEA 182
DEADR+LN DF++SL I +P+ RQ FSATM +K+ + C +
Sbjct: 157 DEADRMLNGDFDESLAIIERCLPKKRQNLFFSATMKDFIKESSIFPIASDCF----EWSQ 212
Query: 183 ASKYSTVDTLKQQYRFVPAKYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLR 238
S +TVDTL Q+Y +D L+ L E +++ M+FT T +LL++ L+
Sbjct: 213 DSDVATVDTLDQRYLLCADYDRDMVLIEALRKYREENESANVMIFTNTKKYCQLLSMTLK 272
Query: 239 NLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNS 298
N+ + + G M Q +R+ AL++FK+ + LI TDVA+RGLDIPSV++V+N+ +P
Sbjct: 273 NMDIDNVCLHGFMRQKERVAALSRFKSNQVRTLIATDVAARGLDIPSVELVMNHMLPRTP 332
Query: 299 KDYIHRVGRTARAGRTGVAISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERV 357
K+YIHRVGRTARAGR G++IS+ +LE IE+ I KL E P ++ V + +V
Sbjct: 333 KEYIHRVGRTARAGRKGMSISIFRFPRDLELLGAIEEEINTKLTEHPIDQRMVERIFMQV 392
Query: 358 TEAKRISQMTIKDS 371
+R S+M + ++
Sbjct: 393 NVTRRESEMQLDNN 406
>gi|150863861|ref|XP_001382482.2| Dead-Box Protein 8, ATP-dependent helicase involved in rRNA
processing [Scheffersomyces stipitis CBS 6054]
gi|158514820|sp|A3LP87.2|DBP8_PICST RecName: Full=ATP-dependent RNA helicase DBP8
gi|149385117|gb|ABN64453.2| Dead-Box Protein 8, ATP-dependent helicase involved in rRNA
processing [Scheffersomyces stipitis CBS 6054]
Length = 445
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 169/402 (42%), Positives = 244/402 (60%), Gaps = 30/402 (7%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+G D IG A+TGSGKT AFA P+L + +E+ + F VL+PTRELA+QI+EQF
Sbjct: 37 SGHDCIGGAKTGSGKTIAFAAPMLT---QWSEDPFGI---FGLVLTPTRELALQIAEQFA 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KY 124
ALG+ ++++ +V+VGG D ++QTL L K+PH V+ATPGRL DH+ N+ ++ L KY
Sbjct: 91 ALGASMNIKISVVVGGEDFVKQTLELQKKPHFVIATPGRLADHILNSGEETISGLRRIKY 150
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQR---ACLKNPV- 178
LVLDEADRLL++ F L+ +V+P RQT LF+AT+T V+ L+ A K PV
Sbjct: 151 LVLDEADRLLSNSFGGDLERCFSVLPPSEKRQTCLFTATVTDAVRALKEKPPAQGKPPVF 210
Query: 179 --KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL--TEVSASSTMVFTRTCDATRLLA 234
++E + + TL +Y FVP+ K+ YL IL + S+ ++F +L
Sbjct: 211 LHEVETVDQVAIPSTLSIKYVFVPSYVKEAYLNSILRLPQYEKSTAVIFVNRTTTAEVLR 270
Query: 235 LMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDI 294
LR L R + M QS+R ++ +FKAG ILI TDVASRGLDIPSV++V+N+DI
Sbjct: 271 RTLRKLEFRVASLHSEMPQSERTNSVQRFKAGAARILIATDVASRGLDIPSVELVVNFDI 330
Query: 295 PTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLL 354
P + D+IHRVGRTARAGR+G A++++ + +++ IE+ I KK+ LL
Sbjct: 331 PADPDDFIHRVGRTARAGRSGDAVTIIAEKDIDRIASIEERINKKME-----------LL 379
Query: 355 ERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKK 396
E VT+ I+ S KR + ++ G + IN+KK
Sbjct: 380 EEVTDDSVITDSLTATSVAKRESLMEMDKENFGEKRKINRKK 421
>gi|194753610|ref|XP_001959103.1| GF12227 [Drosophila ananassae]
gi|190620401|gb|EDV35925.1| GF12227 [Drosophila ananassae]
Length = 522
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 169/397 (42%), Positives = 235/397 (59%), Gaps = 30/397 (7%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+G+D IG A+TGSGKT AFALPIL+ L E + FA VL+PT ELA QISEQF
Sbjct: 43 SGRDCIGAAKTGSGKTFAFALPILEKLSE------EPVSHFALVLTPTHELAYQISEQFL 96
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
G + +R V+ GG D M ++ L +RPHIVVA PGRL DHLT FS LKYLV+
Sbjct: 97 VAGQAMGVRVCVVSGGTDQMIESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVV 156
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKK-----LQRACLKNPVKIEA 182
DEADR+LN DF++SL I +P+ RQ FSATM +K+ + + CL +
Sbjct: 157 DEADRMLNGDFDESLAIIERCLPKTRQNLFFSATMKDFMKESSIFPISKDCL----EWSQ 212
Query: 183 ASKYSTVDTLKQQYRFVPAKYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLR 238
S +TV+TL Q+Y +D L+ L E ++ M+FT T +LL++ L+
Sbjct: 213 DSDVATVETLDQRYLLCADYDRDMVLIEALRKYREENENANVMIFTNTKKYCQLLSMTLK 272
Query: 239 NLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNS 298
N+ + + G M Q +R+ AL++FK+ LI TDVA+RGLDIPSV +VIN+ +P
Sbjct: 273 NMDIDNVCLHGFMRQKERVAALSRFKSNHIRTLIATDVAARGLDIPSVQLVINHMLPRTP 332
Query: 299 KDYIHRVGRTARAGRTGVAISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERV 357
K+YIHRVGRTARAGR G++IS+ +LE IE+ I K+ E P ++ V + +V
Sbjct: 333 KEYIHRVGRTARAGRKGMSISIFRFPRDLELLGAIEEEINTKMTEHPIDQRMVERIFMQV 392
Query: 358 TEAKRISQMTIKDSG------NKRRR----KGGDEDD 384
+R S+M + ++ N RR+ +G D D+
Sbjct: 393 NVTRRESEMQLDNNDFDERAQNYRRKTWIMEGKDPDE 429
>gi|448527184|ref|XP_003869451.1| Dbp8 protein [Candida orthopsilosis Co 90-125]
gi|380353804|emb|CCG23316.1| Dbp8 protein [Candida orthopsilosis]
Length = 443
Score = 283 bits (725), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 169/406 (41%), Positives = 240/406 (59%), Gaps = 30/406 (7%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT AFA P+L E F VL+PTRELA+QI+EQ+ A
Sbjct: 41 GQDCIGGAKTGSGKTIAFAAPMLTQWSEDPY------GIFGLVLTPTRELALQIAEQYTA 94
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YL 125
LG+ ++++ V+VGG D ++Q L L K+PH V+ATPGRL DH+ N+ ++ L+ YL
Sbjct: 95 LGAQMNIKVCVVVGGEDFVKQALELQKKPHFVIATPGRLADHVLNSGEETVSGLRRVRYL 154
Query: 126 VLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKNPV-- 178
VLDEADRLL++ F L+ +V+P RQT LF+AT+T VK L+ R K PV
Sbjct: 155 VLDEADRLLSNSFSSDLERCFSVLPPSDKRQTLLFTATVTDSVKALKEKPRPTGKLPVFM 214
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYL--VYILTEVSASSTMVFTRTCDATRLLAL 235
+++ K + TL+ +Y FVP+ K+ YL + +L + S+ +VF +L
Sbjct: 215 HEVDTVDKVAIPSTLQIEYVFVPSYVKEAYLHSILLLPKYKESTAVVFVNRTVTAEVLRR 274
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
LR L R + M QS+R +L++FKA ILI TDVASRGLDIP+V++V+N+DIP
Sbjct: 275 ALRKLDFRVASLHSEMPQSERTNSLHRFKADAARILIATDVASRGLDIPTVELVVNFDIP 334
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLE 355
+ D+IHRVGRTARAGR G AIS++ + ++E IE+ I KK+ LLE
Sbjct: 335 ADPDDFIHRVGRTARAGRKGDAISIIGEKDIERIQSIEERINKKME-----------LLE 383
Query: 356 RVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKKLSKRK 401
+ + K I + KR + + G + INK+K SK +
Sbjct: 384 EINDDKVIKDSLSAMTTAKRESLSEMDKEGFGEKRKINKRKYSKEE 429
>gi|17136814|ref|NP_476927.1| DEAD box protein 45A [Drosophila melanogaster]
gi|12643712|sp|Q07886.2|DDX49_DROME RecName: Full=Probable ATP-dependent RNA helicase Dbp45A;
Short=DEAD box protein 45A
gi|7303950|gb|AAF58994.1| DEAD box protein 45A [Drosophila melanogaster]
gi|16185764|gb|AAL13957.1| LD47509p [Drosophila melanogaster]
Length = 521
Score = 283 bits (725), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 169/396 (42%), Positives = 234/396 (59%), Gaps = 30/396 (7%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D IG A+TGSGKT AFALPIL+ L E + FA VL+PT ELA QISEQF
Sbjct: 43 AGQDCIGAAKTGSGKTFAFALPILERLSE------EPVSHFALVLTPTHELAYQISEQFL 96
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
G + +R V+ GG D M ++ L +RPHIVVA PGRL DHLT FS LKYLV+
Sbjct: 97 VAGQAMGVRVCVVSGGTDQMVESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVV 156
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKK-----LQRACLKNPVKIEA 182
DEADR+LN DF++SL I +P+ RQ FSATM +K+ + C +
Sbjct: 157 DEADRMLNGDFDESLSIIERCLPKTRQNLFFSATMKDFIKESSIFPIASDCF----EWSQ 212
Query: 183 ASKYSTVDTLKQQYRFVPAKYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLR 238
S +TV+TL Q+Y +D L+ L E ++ M+FT T +LL++ L+
Sbjct: 213 DSDVATVETLDQRYLLCADYDRDMVLIEALRKYREENENANVMIFTNTKKYCQLLSMTLK 272
Query: 239 NLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNS 298
N+ + + G M Q +R+ AL++FK+ + LI TDVA+RGLDIPSV++V+N+ +P
Sbjct: 273 NMEIDNVCLHGFMRQKERVAALSRFKSNQIRTLIATDVAARGLDIPSVELVMNHMLPRTP 332
Query: 299 KDYIHRVGRTARAGRTGVAISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERV 357
K+YIHRVGRTARAGR G++IS+ +LE IE+ I KL E P ++ V + +V
Sbjct: 333 KEYIHRVGRTARAGRKGMSISIFRFPRDLELLAAIEEEINTKLTEHPIDQRMVERIFMQV 392
Query: 358 TEAKRISQMTIKDSG------NKRRR----KGGDED 383
+R S+M + ++ N RR+ +G D D
Sbjct: 393 NVTRRESEMQLDNNDFDERAQNYRRKTWIMEGKDPD 428
>gi|340502636|gb|EGR29308.1| hypothetical protein IMG5_158860 [Ichthyophthirius multifiliis]
Length = 473
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/266 (53%), Positives = 186/266 (69%), Gaps = 19/266 (7%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPT-------RELAIQ 61
G+D+I LA+TGSGKT AFALP++Q+LL+ P F C T ++L I
Sbjct: 92 GQDIIALAETGSGKTMAFALPVIQSLLD-------APIKFLCAYIVTYKSNYVCKQLNI- 143
Query: 62 ISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGT 121
++LG G+SL+ V++GG++ Q AL K+PHIVV TPGR++ HL NTK F++
Sbjct: 144 ----LKSLGVGVSLKTTVIIGGLEPQIQVQALQKKPHIVVGTPGRILYHLQNTKVFNIKQ 199
Query: 122 LKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE 181
LKYL+LDEAD+LLN DFEK +++IL+V+P+ R T+LFSATMT KV KL RA L+NPVKIE
Sbjct: 200 LKYLILDEADKLLNMDFEKDINKILDVLPKKRNTFLFSATMTNKVNKLTRASLQNPVKIE 259
Query: 182 AASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLG 241
+ KY TV TL Q Y F+P+KYKDCYLVY L E + ++++F TC L L+L+NLG
Sbjct: 260 VSLKYQTVITLVQLYSFIPSKYKDCYLVYTLNEFAGQTSIIFVTTCLNAIKLTLILKNLG 319
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGE 267
A+ I+G MSQ KR GA+NKFKAGE
Sbjct: 320 FSAVTINGQMSQVKRFGAINKFKAGE 345
>gi|344303887|gb|EGW34136.1| hypothetical protein SPAPADRAFT_59553 [Spathaspora passalidarum
NRRL Y-27907]
Length = 431
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/379 (43%), Positives = 237/379 (62%), Gaps = 21/379 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D IG A+TGSGKT AFA P+L + + + R + F +L+PTRELA+QI+EQF A
Sbjct: 38 GHDCIGGAKTGSGKTIAFAAPMLT---DWSADPRGI---FGLILTPTRELALQIAEQFAA 91
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YL 125
LGS ++++ +V+VGG D++ Q LAL + PH V+ATPGRL DH+ N+ ++ LK YL
Sbjct: 92 LGSNMNIKVSVIVGGEDIVTQALALQRNPHFVIATPGRLADHVLNSGEETVAGLKRVKYL 151
Query: 126 VLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACLKN---PV-- 178
VLDEADRLL++ F L+ VIP RQT LF+AT+T V+ L+ A K PV
Sbjct: 152 VLDEADRLLSNSFSSDLERCFKVIPSSENRQTLLFTATVTDAVRALKDAPAKEGKLPVFM 211
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLAL 235
++E K + ++L +Y FVP+ K+ YL IL+ + + ++F ++
Sbjct: 212 HEVETVDKVAIPNSLSIKYVFVPSYVKEAYLHSILSLEQYKDKTAVIFVNRTITAEVICR 271
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
LR L R + M Q++R+ +L++FKAG ILI TDVASRGLDIPSV++V+N+DIP
Sbjct: 272 TLRKLEFRVASLHSQMRQTERINSLHRFKAGAARILIATDVASRGLDIPSVELVVNFDIP 331
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGK--KLPEFPAEEEEVLLL 353
+ D+IHRVGRTARAGR G A+S+V + ++E IE+ I K +L E +++ +
Sbjct: 332 ADPDDFIHRVGRTARAGRKGDAVSIVGEKDVERIHAIEERIVKTMELLEGVSDDRIIKES 391
Query: 354 LERVTEAKRISQMTIKDSG 372
L V+ AKR S M + G
Sbjct: 392 LTAVSTAKRESMMEMDKQG 410
>gi|91787410|ref|YP_548362.1| DEAD/DEAH box helicase [Polaromonas sp. JS666]
gi|91696635|gb|ABE43464.1| DEAD/DEAH box helicase-like protein [Polaromonas sp. JS666]
Length = 492
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/384 (42%), Positives = 230/384 (59%), Gaps = 14/384 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
GKD++G AQTG+GKT AF+LP+LQ +L+ EN T PA A VL PTRELA+Q++EQ
Sbjct: 40 GKDVMGAAQTGTGKTAAFSLPLLQRMLK-HENASTSPARHPVRALVLLPTRELAVQVAEQ 98
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+ +LR AV+ GG+DM QTL L + ++VATPGRL+DH+ K L ++Y+
Sbjct: 99 VKLYAKHTNLRSAVVFGGMDMKPQTLELKQGVEVLVATPGRLLDHI-EAKNTVLNQVEYV 157
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L++PV IE A
Sbjct: 158 VLDEADRMLDIGFLPDLQRILSYLPKQRITLLFSATFSPEIKRLASSYLQDPVTIEVARS 217
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T T++Q + V A K L IL E VF + LA L G +
Sbjct: 218 NATASTVEQHFYSVGADDKRRALHQILKERGMKQAFVFVNSKLGCARLARSLEREGLKTT 277
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL+ FK GE ++L+CTDVA+RGLDI V V N+D+P N++DY+HR+
Sbjct: 278 ALHGDKSQDERLKALDAFKKGEVDLLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRI 337
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
GRT RAG +G+A+S V + IEKLI K+ P E +E + RIS+
Sbjct: 338 GRTGRAGASGLAVSFVASSDQRLVADIEKLIKTKIELEPIEFDE---------DRPRISE 388
Query: 366 MTIKDSGNKRRRKGGDEDDDIGRQ 389
+ G + R+G + ++ GR+
Sbjct: 389 QGRINDGRRMYRQGNEGEEGAGRE 412
>gi|195379947|ref|XP_002048732.1| GJ21163 [Drosophila virilis]
gi|194143529|gb|EDW59925.1| GJ21163 [Drosophila virilis]
Length = 519
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 171/396 (43%), Positives = 233/396 (58%), Gaps = 30/396 (7%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+GKD IG A+TGSGKT AFALPIL+ L E + FA VL+PT ELA QISEQF
Sbjct: 43 SGKDCIGAAKTGSGKTFAFALPILEKLSE------EPVSHFALVLTPTHELAYQISEQFL 96
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
G + +R V+ GG D M ++ L +RPHIVVA PGRL DHLT FS LKYLV+
Sbjct: 97 VAGQPMGVRVCVVSGGTDQMIESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVV 156
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKK-----LQRACLKNPVKIEA 182
DEADR+LN DF++SL I +P+ RQ FSATM +K+ + + CL +
Sbjct: 157 DEADRMLNGDFDESLAIIERCLPKTRQNLFFSATMKDFMKESSIFPIAKDCL----EWSQ 212
Query: 183 ASKYSTVDTLKQQYRFVPAKYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLR 238
S +TVDTL+Q+Y +D L+ L + ++ M+FT T +LL++ L
Sbjct: 213 ESDVATVDTLEQRYLLCADYDRDMVLIEALRKYREQNENANVMIFTNTKKYCQLLSMTLS 272
Query: 239 NLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNS 298
++ + + G M Q +R+ AL++FK+ LI TDVA+RGLDIPSV +VIN+ +P
Sbjct: 273 SMEIENVCLHGFMRQKERVAALSRFKSNHIRTLIATDVAARGLDIPSVQLVINHMLPRTP 332
Query: 299 KDYIHRVGRTARAGRTGVAISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERV 357
K+YIHRVGRTARAGR G+AIS+ +LE IE I KL E P ++ V + +V
Sbjct: 333 KEYIHRVGRTARAGRKGLAISIFRFPRDLELLGAIEAEINTKLTEHPIDQRMVERIFMQV 392
Query: 358 TEAKRISQMTIKDSG------NKRRR----KGGDED 383
+R S+M + ++ N RR+ +G D D
Sbjct: 393 NVTRRESEMQLDNNDFDERAQNYRRKTWIMEGKDPD 428
>gi|195581763|ref|XP_002080703.1| GD10627 [Drosophila simulans]
gi|194192712|gb|EDX06288.1| GD10627 [Drosophila simulans]
Length = 527
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 168/392 (42%), Positives = 233/392 (59%), Gaps = 22/392 (5%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D IG A+TGSGKT AFALPIL+ L E + FA VL+PT ELA QISEQF
Sbjct: 43 AGQDCIGAAKTGSGKTFAFALPILERLSE------EPVSHFALVLTPTHELAYQISEQFL 96
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
G + +R V+ GG D M ++ L +RPHIVVA PGRL DHLT FS LKYLV+
Sbjct: 97 VAGQAMGVRVCVVSGGTDQMVESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVV 156
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQ-RACLKNPVKIEAASKY 186
DEADR+L+ DF++SL I +P+ RQ FSATM +K+ N + S
Sbjct: 157 DEADRMLSGDFDESLAIIERCLPKTRQNLFFSATMRDFMKESSIFPIASNCFEWSQDSDV 216
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQ 242
+TV+TL Q+Y +D L+ L E ++ M+FT T +LL++ L+N+
Sbjct: 217 ATVETLDQRYLLCADYDRDMVLIEALRKYREENENANVMIFTNTKKYCQLLSMTLKNMDI 276
Query: 243 RAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYI 302
+ + G M Q +R+ AL++FK+ + LI TDVA+RGLDIPSV++V+N+ +P K+YI
Sbjct: 277 DNVCLHGFMRQKERVAALSRFKSNQIRTLIATDVAARGLDIPSVELVMNHMLPRTPKEYI 336
Query: 303 HRVGRTARAGRTGVAISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
HRVGRTARAGR G++IS+ +LE IE+ I KL E P ++ V + +V +
Sbjct: 337 HRVGRTARAGRKGMSISIFRFPRDLELLAAIEEEINTKLTEHPIDQRMVERIFMQVNVTR 396
Query: 362 RISQMTIKDSG------NKRRR----KGGDED 383
R S+M + ++ N RR+ +G D D
Sbjct: 397 RESEMQLDNNDFDERAQNYRRKTWIMQGKDPD 428
>gi|290996400|ref|XP_002680770.1| DEAD/DEAH box helicase [Naegleria gruberi]
gi|284094392|gb|EFC48026.1| DEAD/DEAH box helicase [Naegleria gruberi]
Length = 614
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 164/365 (44%), Positives = 237/365 (64%), Gaps = 8/365 (2%)
Query: 11 DLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEALG 70
D+IG+++TGSGKT ++ LP+L+ LL++ + A +L+PTRELA+QI ALG
Sbjct: 194 DIIGISETGSGKTASYVLPVLERLLQLKGDPSPCSAL---ILAPTRELAVQIQGHVNALG 250
Query: 71 SGISLRCAVLVGGVDMMQQTLALGK-RPHIVVATPGRLMDHLTNTK-GFSLGTLKYLVLD 128
S I + L GG + +L K R H+VV TPGR+ D L K F+L ++LVLD
Sbjct: 251 SKIGITSTTLTGGTSIANDSLRFKKNRYHVVVGTPGRVCDLLEFGKSNFNLNHTRFLVLD 310
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQT-YLFSATMTKKVKKLQR-ACLKNPVKIE-AASK 185
EAD++L +F+K L I + R + T YLFSATMT K+ KL + + NPVKI+ +SK
Sbjct: 311 EADKMLGSEFDKWLTTISEKLRRKQCTVYLFSATMTTKIDKLLKLHQMTNPVKIQVTSSK 370
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
Y TVDTL QQY +P KYK+ YLVY+L E +VF LL+++LR+L +
Sbjct: 371 YHTVDTLTQQYLLLPEKYKEQYLVYLLNENPGKRILVFAGQNSTCILLSILLRSLKFPTV 430
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
P+SGHM ++ R L KF +G+ IL+ TD+A+RGLDIP VD+VIN+DIP +SK+Y+HRV
Sbjct: 431 PLSGHMDETHRQHCLRKFVSGDRPILVATDIAARGLDIPLVDIVINFDIPVHSKEYVHRV 490
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
GRTAR G G+A++ V QY+L+++ +IE LI KK+ +E +LL V++A ++++
Sbjct: 491 GRTARIGNQGLAVTFVTQYDLQYFQKIEALIEKKMDVCNVNKENAMLLTNTVSQALKLAK 550
Query: 366 MTIKD 370
+ D
Sbjct: 551 KKMSD 555
>gi|195332686|ref|XP_002033028.1| GM21090 [Drosophila sechellia]
gi|194124998|gb|EDW47041.1| GM21090 [Drosophila sechellia]
Length = 522
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 168/396 (42%), Positives = 234/396 (59%), Gaps = 30/396 (7%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D IG A+TGSGKT AFALPIL+ L E + FA VL+PT ELA QISEQF
Sbjct: 43 AGQDCIGAAKTGSGKTFAFALPILERLSE------EPVSHFALVLTPTHELAYQISEQFL 96
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
G + +R V+ GG D M ++ L +RPHIVVA PGRL DHLT FS LKYLV+
Sbjct: 97 VAGQAMGVRVCVVSGGTDQMVESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVV 156
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKK-----LQRACLKNPVKIEA 182
DEADR+LN DF++SL I +P+ RQ FSATM +K+ + C +
Sbjct: 157 DEADRMLNGDFDESLAIIERCLPKTRQNLFFSATMKDFMKESSIFPIASDCF----EWSQ 212
Query: 183 ASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEV----SASSTMVFTRTCDATRLLALMLR 238
S +TV+TL Q+Y +D L+ L + ++ M+FT T +LL++ L+
Sbjct: 213 DSDVATVETLDQRYLLCADYDRDMVLIEALRKYREGNENANVMIFTNTKKYCQLLSMTLK 272
Query: 239 NLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNS 298
N+ + + G M Q +R+ AL++FK+ + LI TDVA+RGLDIPSV++V+N+ +P
Sbjct: 273 NMDIDNVCLHGFMRQKERVAALSRFKSNQIRTLIATDVAARGLDIPSVELVMNHMLPRTP 332
Query: 299 KDYIHRVGRTARAGRTGVAISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERV 357
K+YIHRVGRTARAGR G++IS+ +LE IE+ I KL E P ++ V + +V
Sbjct: 333 KEYIHRVGRTARAGRKGMSISIFRFPRDLELLAAIEEEINTKLTEHPIDQRMVERIFMQV 392
Query: 358 TEAKRISQMTIKDSG------NKRRR----KGGDED 383
+R S+M + ++ N RR+ +G D D
Sbjct: 393 NVTRRESEMQLDNNDFDERAQNYRRKTWIMEGKDPD 428
>gi|223590193|sp|A5DLE0.2|DBP8_PICGU RecName: Full=ATP-dependent RNA helicase DBP8
gi|190347673|gb|EDK39993.2| hypothetical protein PGUG_04091 [Meyerozyma guilliermondii ATCC
6260]
Length = 433
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 168/406 (41%), Positives = 240/406 (59%), Gaps = 30/406 (7%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D IG A+TGSGKT AFA P++ E + VL+PTRELA+QI+EQF
Sbjct: 37 AGRDCIGGAKTGSGKTIAFAAPMMTKWSE------DPFGIYGLVLTPTRELALQIAEQFL 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---Y 124
ALG+ ++++ AV+VGG DM++Q L + K PH ++ATPGRL DH+ N+ ++G LK +
Sbjct: 91 ALGASMNIKVAVVVGGEDMVKQALEIQKSPHFIIATPGRLADHILNSGDDTVGGLKRIKF 150
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACL---KNPV- 178
LVLDEADRLL++ F L+ ++P RQT LF+AT+T V+ L+ + K PV
Sbjct: 151 LVLDEADRLLSNSFGSDLERCFKILPDASKRQTLLFTATVTDAVRALKDKPVPEGKKPVF 210
Query: 179 --KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLA 234
+I + + + TL Y FVP+ K+ YL IL + +S +VF +L
Sbjct: 211 IHEIVSKDQVAIPATLTISYVFVPSYVKEAYLHNILVSPKYEKASAIVFVNRTYTAEILR 270
Query: 235 LMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDI 294
LR L R + M QS+R +L++F+AG +LI TDVASRGLDIP+V++V+N DI
Sbjct: 271 RTLRKLDIRVASLHSEMPQSERTNSLHRFRAGAARVLIATDVASRGLDIPNVELVVNQDI 330
Query: 295 PTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLL 354
P + DYIHRVGRTARAG+ G ++S+V++ ++E L IE I KK+ LL
Sbjct: 331 PADPDDYIHRVGRTARAGKKGGSVSIVSEKDVERILAIENHINKKMD-----------LL 379
Query: 355 ERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKKLSKR 400
E V + K I + + KR E + G + INK+K +R
Sbjct: 380 EEVNDDKIIKESLSIVTAAKRESVADMEKEGFGEKRKINKRKREER 425
>gi|213403328|ref|XP_002172436.1| ATP-dependent RNA helicase dbp8 [Schizosaccharomyces japonicus
yFS275]
gi|212000483|gb|EEB06143.1| ATP-dependent RNA helicase dbp8 [Schizosaccharomyces japonicus
yFS275]
Length = 456
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 168/384 (43%), Positives = 232/384 (60%), Gaps = 21/384 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D IG A+TGSGKT AFALPIL+ R FA +L+PTRELAIQI EQF A
Sbjct: 44 GADCIGGAKTGSGKTIAFALPILEKW------ARDPFGTFAVILTPTRELAIQIDEQFAA 97
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKY 124
LG+ ++L+ ++VGG+DM+ Q +AL KRPHIVVATPGRL D L + G SL ++
Sbjct: 98 LGAPMNLKHILVVGGMDMVAQAIALSKRPHIVVATPGRLAD-LIRSNGEETYASLHRTQF 156
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKL---QRACLKNPVK 179
+V DEADRLL+ F LD+ L V+P RQT LF+ATMT ++ L + K P+
Sbjct: 157 VVFDEADRLLSPTFADDLDDCLEVLPPPEKRQTLLFTATMTDAIRALKDREPHPGKPPLW 216
Query: 180 IEAASK--YSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLAL 235
+ S ++L+Q Y V + +D YLV +L+ E S +VF LL
Sbjct: 217 LYEVDTEGVSIPESLEQHYLLVASHVRDAYLVQLLSSPENEDKSVIVFANRTYTVELLYR 276
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
MLR L R + M+Q +R+ +L +F+A +LI TDVASRGLDIPSV MV+NYDIP
Sbjct: 277 MLRLLDFRVTCLHSEMAQRERVNSLGRFRAEAARVLIATDVASRGLDIPSVKMVVNYDIP 336
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA-EEEEVLLLL 354
+ DY+HRVGR AR GR G ++S V +++++ IE +GK++ + + E ++L L
Sbjct: 337 RDPDDYVHRVGRAARVGRFGESVSFVTEHDVDLIHAIEDRVGKQMTAYESFSENKMLEKL 396
Query: 355 ERVTEAKRISQMTIKDSGNKRRRK 378
+++ EAKR + + D RRK
Sbjct: 397 KQINEAKRKVSLELVDEDFGSRRK 420
>gi|387592705|gb|EIJ87729.1| hypothetical protein NEQG_02276 [Nematocida parisii ERTm3]
gi|387595334|gb|EIJ92959.1| hypothetical protein NEPG_02358 [Nematocida parisii ERTm1]
Length = 427
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 139/363 (38%), Positives = 223/363 (61%), Gaps = 7/363 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+ L+ ++ TG+GKT A++LPIL +LL + R F+A ++ PTREL+ Q+ +
Sbjct: 44 QSLLAISNTGTGKTLAYSLPILHSLLN---DDR---YFYAMIILPTRELSQQVHAVLSDI 97
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
G+ I LR +L+G VD++ Q +L RPHI++ TPGR+ HL NTKG +L + KYLVLDE
Sbjct: 98 GAEIGLRTTLLIGAVDLLVQGKSLAARPHIIIGTPGRIYHHLRNTKGITLSSFKYLVLDE 157
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
DRLL++DF+ ++ IL +I + +LFSAT+TK+V + + NP+
Sbjct: 158 CDRLLDNDFDGDINGILELISP-KYIFLFSATLTKRVNAFKNKRMNNPLLYNVQKDEGIP 216
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
+ + QQY ++P KYK+ YL I+ + + +VF +TC + MLR+L + I G
Sbjct: 217 ENISQQYVYLPQKYKEVYLYSIIRSLGSRKCIVFVKTCITAEKIERMLRSLDESVCSIHG 276
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+ SQ R + F+ G ++LI TDV +RG+D+ + ++INYD+P K+YIHR+GRT
Sbjct: 277 NKSQEVRTETIEMFRRGRYSVLISTDVVARGMDMEGIKIIINYDMPDGHKEYIHRIGRTG 336
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK 369
RAG TG +I+LV QY++E + ++E + K+ E+ + + L + V AK+ + + +K
Sbjct: 337 RAGETGSSITLVTQYDVEEFRKLEVKLDLKMDEYSISSDLIYSLSDSVDHAKKEAAVDMK 396
Query: 370 DSG 372
+ G
Sbjct: 397 EEG 399
>gi|410076594|ref|XP_003955879.1| hypothetical protein KAFR_0B04480 [Kazachstania africana CBS 2517]
gi|372462462|emb|CCF56744.1| hypothetical protein KAFR_0B04480 [Kazachstania africana CBS 2517]
Length = 435
Score = 280 bits (717), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 162/385 (42%), Positives = 231/385 (60%), Gaps = 21/385 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT FA P+L A F VL+PTRELA+QI+EQF A
Sbjct: 42 GRDCIGGAKTGSGKTITFAAPML------ARWSEDPCGMFGVVLTPTRELAMQIAEQFTA 95
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YL 125
LGS +++R A++VGG ++ Q + L ++PH ++ATPGRL H+ N+ ++G LK YL
Sbjct: 96 LGSSMNIRVALIVGGESIVNQAIELQRKPHFIIATPGRLAHHILNSGEDTVGGLKRAKYL 155
Query: 126 VLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACLKN---PV-- 178
VLDEAD LLND F K L + +P RQT LF+AT+T +V+ LQ A K P+
Sbjct: 156 VLDEADFLLNDTFAKDLSTCIGALPDKNARQTLLFTATITDQVRALQNAPAKGGKLPIFA 215
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLAL 235
++E+ K + TLK +Y +P K+ YL +LT S+ ++F +L
Sbjct: 216 YQVESVDKVAIPSTLKVEYILIPEHVKEAYLYQLLTCENYINSNVIIFVNRTATAEVLRK 275
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
L++L R + MSQ +R +L++F+A ILI TDVASRGLDIP+V++V+NYDIP
Sbjct: 276 TLKHLDLRVASLHSQMSQQERTNSLHRFRANAARILIATDVASRGLDIPTVELVVNYDIP 335
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--L 353
++ YIHR GRTARAG++G AIS + ++ IE+ I KK+ E + ++
Sbjct: 336 SDPDTYIHRSGRTARAGKSGDAISFITPRDVSRIAAIEERINKKMTECDKVHDTAVIRKA 395
Query: 354 LERVTEAKRISQMTIKDSGNKRRRK 378
L +VT+AKR S M ++ RRK
Sbjct: 396 LVKVTKAKRESLMEMEKENFGERRK 420
>gi|195120383|ref|XP_002004708.1| GI20069 [Drosophila mojavensis]
gi|193909776|gb|EDW08643.1| GI20069 [Drosophila mojavensis]
Length = 521
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 170/393 (43%), Positives = 234/393 (59%), Gaps = 22/393 (5%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKD IG A+TGSGKT AFALPIL+ L E + FA VL+PT ELA QISEQF
Sbjct: 43 AGKDCIGAAKTGSGKTFAFALPILEKLSE------EPVSHFALVLTPTHELAYQISEQFL 96
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
G + +R V+ GG D M ++ L +RPHIVVA PGRL DHLT FS LK+LV+
Sbjct: 97 VAGQPMGVRVCVVSGGTDQMIESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKFLVV 156
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACL-KNPVKIEAASKY 186
DEADR+LN DF++SL I +P+ RQ FSATM +K+ + K+ ++ S
Sbjct: 157 DEADRMLNGDFDESLAIIERCLPKTRQNLFFSATMKDFMKESSIFPISKDLMEWSQESDV 216
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQ 242
+TV+TL+Q+Y +D L+ L E ++ M+FT T +LL++ L ++
Sbjct: 217 ATVETLEQRYLLCADYDRDMVLIEALRKFREENENANVMIFTNTKKYCQLLSMTLASMEI 276
Query: 243 RAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYI 302
+ + G M Q +R+ AL++FK+ LI TDVA+RGLDIPSV +VIN+ +P K+YI
Sbjct: 277 ENVCLHGFMRQKERVAALSRFKSNHIRTLIATDVAARGLDIPSVQLVINHMLPRTPKEYI 336
Query: 303 HRVGRTARAGRTGVAISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
HRVGRTARAGR G+AIS+ +LE IE I KL E P ++ V + +V +
Sbjct: 337 HRVGRTARAGRKGLAISIFRFPRDLELLGAIEAEINCKLTEHPIDQRMVERIFMQVNVTR 396
Query: 362 RISQMTIKDSG------NKRRR----KGGDEDD 384
R S+M + ++ N RR+ +G D D+
Sbjct: 397 RESEMQLDNNDFDERAQNYRRKTWIMEGKDPDE 429
>gi|164659074|ref|XP_001730662.1| hypothetical protein MGL_2458 [Malassezia globosa CBS 7966]
gi|159104558|gb|EDP43448.1| hypothetical protein MGL_2458 [Malassezia globosa CBS 7966]
Length = 452
Score = 280 bits (716), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 171/432 (39%), Positives = 246/432 (56%), Gaps = 49/432 (11%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG A+TGSGKT AFALPIL L + TV +A +L+PTREL +Q+ EQF A
Sbjct: 21 GRDVIGGAETGSGKTLAFALPILHNLF-----KDTV-GGYAVILTPTRELGVQLHEQFLA 74
Query: 69 LGSG--ISLRCAVLVGGVDMMQQTLALG-KRPHIVVATPGRLMDHLTN--TKGFSLGTLK 123
+G G + L+CA+++GG+DM +Q LG +RPHI+VATPGRL+D L++ + + L K
Sbjct: 75 VGQGSRMGLKCALVLGGMDMTRQANELGEQRPHIIVATPGRLVDLLSSGAAQEWGLERCK 134
Query: 124 YLVLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACLKNPVKIE 181
++VLDEADRLL+ F +L + +++P MRQT LF+AT+T ++++L P K+
Sbjct: 135 FVVLDEADRLLSPTFAPALAYLFSILPPAHMRQTLLFTATLTPEIERLTEKT-PEPGKLP 193
Query: 182 AASK-----YSTVDTLKQQYRFVPAKYKDCYLVYILT----------------------- 213
+ ST D+L QQY VP+ ++ YLVY+L
Sbjct: 194 PLLRKIDMDTSTPDSLIQQYTLVPSHMREPYLVYLLNNPPCENKVKVHAELSDVYRTHKA 253
Query: 214 -------EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAG 266
E S T++F C LL+ ML LG + + + Q RL L F+A
Sbjct: 254 PKIKGGEEPSFPLTIIFVSRCKNAELLSRMLTELGIPNVSLHSMLPQFTRLHNLQMFRAR 313
Query: 267 ECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYEL 326
ILI TDV SRGLD+P V++V+N+D+P +DYIHRVGRTAR GR G A+S V ++++
Sbjct: 314 RVPILISTDVGSRGLDVPDVELVVNWDVPAAWEDYIHRVGRTARKGRRGWAVSFVTEHDV 373
Query: 327 EWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDI 386
E IE I K+L E E +VL L ++ AKR++ M + D +R+ I
Sbjct: 374 ELIQAIEAKIHKRLDELELPEAQVLDRLSHISAAKRVASMELHDEKFGEQRERNKRKAKI 433
Query: 387 GRQFGINKKKLS 398
+ +K KLS
Sbjct: 434 AQGGKRSKHKLS 445
>gi|398398659|ref|XP_003852787.1| ATP-dependent RNA helicase dbp8 [Zymoseptoria tritici IPO323]
gi|339472668|gb|EGP87763.1| hypothetical protein MYCGRDRAFT_92934 [Zymoseptoria tritici IPO323]
Length = 503
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 171/409 (41%), Positives = 239/409 (58%), Gaps = 34/409 (8%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D IG ++TGSGKT AF LPILQ + R FA VL+PTRELA+QI EQF+
Sbjct: 107 AGRDCIGGSRTGSGKTIAFGLPILQ------QWARQPSGIFALVLTPTRELALQIYEQFQ 160
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG---FSLGTLKY 124
A+G G ++C ++ GG M Q L L KRPHIV+ATPGRL DH++++ + L K+
Sbjct: 161 AIGGGQGIKCVLVTGGAHMRNQALELAKRPHIVIATPGRLADHISSSGEDTIYGLRKCKF 220
Query: 125 LVLDEADRLLNDDFEKSL----DEILNVIP--RMRQTYLFSATMTKKVKKLQ---RACLK 175
+VLDEADRLL + S+ + ++++P RQT LF+AT+T +V+ L+ R+ +
Sbjct: 221 VVLDEADRLLASSKKGSMLPDVETCMSILPPASSRQTCLFTATITPEVRALKSAPRSPSR 280
Query: 176 NPVKIEAAS--KYSTVDTLKQQYRFVPAKYKDCYLVYIL--TEVSASSTMVFTRTCDATR 231
PV I + DTL Q Y+ V +K+ YL +L E +T++FT +
Sbjct: 281 PPVFISEVDVDSLAIPDTLTQTYQLVNVLHKEKYLHILLLTPENVTKTTIIFTNRTETAN 340
Query: 232 LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVIN 291
LL LR L R + + +R L +F+AG IL+ TDVASRGLD+P V +VIN
Sbjct: 341 LLEHTLRLLTHRVTALHSALPHEQRTSNLARFRAGAARILVATDVASRGLDVPDVGLVIN 400
Query: 292 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 351
YDIP N DYIHRVGRTARAGR G++ISLV Q ++E IE +G+K+ F EEE V
Sbjct: 401 YDIPRNPDDYIHRVGRTARAGRKGLSISLVGQRDVELVQGIEARVGRKMEVF--EEEGVS 458
Query: 352 LLLERVTEAKRISQMTIKDSGNKRRRK--GGDEDDDI--GRQFGINKKK 396
+ E + + + + G K+R +E D+ R G+ KK+
Sbjct: 459 V------EGRVVRSEVLNEVGGKKREAMLAIEEGRDVKGNRSKGMGKKR 501
>gi|307110080|gb|EFN58317.1| hypothetical protein CHLNCDRAFT_142335 [Chlorella variabilis]
Length = 268
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 126/178 (70%), Positives = 158/178 (88%)
Query: 146 LNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKD 205
++++ + R+T LFSATMT KV KLQRACL++P K+E ASKYSTVDTL+QQY FVPAKYKD
Sbjct: 91 IDMMAQERRTQLFSATMTSKVAKLQRACLRDPAKVEVASKYSTVDTLRQQYMFVPAKYKD 150
Query: 206 CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKA 265
CYL ++LTE++ +++++FTRTCD+TR +ALMLRNLG A+PI G MSQ KRLGALNKFKA
Sbjct: 151 CYLTFLLTELAGATSIIFTRTCDSTRRIALMLRNLGFGAVPIHGQMSQPKRLGALNKFKA 210
Query: 266 GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQ 323
GE +ILI TDVASRGLDIPSVD+V+NYD+PTNSKDY+HRVGRTARAGR+G ++++V Q
Sbjct: 211 GERSILIATDVASRGLDIPSVDVVVNYDVPTNSKDYVHRVGRTARAGRSGRSVTIVTQ 268
>gi|146414784|ref|XP_001483362.1| hypothetical protein PGUG_04091 [Meyerozyma guilliermondii ATCC
6260]
Length = 433
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 240/406 (59%), Gaps = 30/406 (7%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D IG A+TGSGKT AFA P++ E + VL+PTRELA+QI+EQF
Sbjct: 37 AGRDCIGGAKTGSGKTIAFAAPMMTKWSE------DPFGIYGLVLTPTRELALQIAEQFL 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---Y 124
ALG+ ++++ AV+VGG DM++Q L + K PH ++ATPGRL DH+ N+ ++G LK +
Sbjct: 91 ALGASMNIKVAVVVGGEDMVKQALEIQKSPHFIIATPGRLADHILNSGDDTVGGLKRIKF 150
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACL---KNPV- 178
LVLDEADRLL++ F L+ ++P RQT LF+AT+T V+ L+ + K PV
Sbjct: 151 LVLDEADRLLSNSFGSDLERCFKILPDASKRQTLLFTATVTDAVRALKDKPVPEGKKPVF 210
Query: 179 --KIEAASKYSTVDTLKQQYRFVPAKYKDCYL--VYILTEVSASSTMVFTRTCDATRLLA 234
+I + + + TL Y FVP+ K+ YL + +L + + +VF +L
Sbjct: 211 IHEIVSKDQVAIPATLTISYVFVPSYVKEAYLHNILVLPKYEKALAIVFVNRTYTAEILR 270
Query: 235 LMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDI 294
LR L R + M QS+R +L++F+AG +LI TDVASRGLDIP+V++V+N DI
Sbjct: 271 RTLRKLDIRVASLHSEMPQSERTNSLHRFRAGAARVLIATDVASRGLDIPNVELVVNQDI 330
Query: 295 PTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLL 354
P + DYIHRVGRTARAG+ G ++S+V++ ++E L IE I KK+ LL
Sbjct: 331 PADPDDYIHRVGRTARAGKKGGSVSIVSEKDVERILAIENHINKKMD-----------LL 379
Query: 355 ERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKKLSKR 400
E V + K I + + KR E + G + INK+K +R
Sbjct: 380 EEVNDDKIIKESLSIVTAAKRESVADMEKEGFGEKRKINKRKREER 425
>gi|167533121|ref|XP_001748241.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773361|gb|EDQ87002.1| predicted protein [Monosiga brevicollis MX1]
Length = 473
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 160/375 (42%), Positives = 235/375 (62%), Gaps = 27/375 (7%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+ A+TGSGKT AFALPIL+ L +A VL+PTRELA QIS+QF++L
Sbjct: 39 EDVYAAAKTGSGKTAAFALPILEQL------SHDPYGVYAVVLTPTRELAFQISDQFQSL 92
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
G I +R A +VGG+D ++Q + L +RPHI+VATPGRL H LVLDE
Sbjct: 93 GKPIGVRVATIVGGIDSIKQAVELSRRPHIIVATPGRLAVHT-------------LVLDE 139
Query: 130 ADRLL-NDDFEKSLDEILNVIPRMRQTYLFSATMTKKVK-KLQRACLKNPVKIEAASKYS 187
ADRL+ N+ + LD IL+ +P RQ LFSAT+ ++ K+ + ++ + + +
Sbjct: 140 ADRLMTNETLQGHLDVILDALPEERQNLLFSATLLEEPSGKISQQLHRDLFRYSEIKEEA 199
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVS---ASSTMVFTRTCDATRLLALMLRNLGQR- 243
TV TL+Q+Y F+PA + YL++IL ++ +S ++F TC LAL LR L R
Sbjct: 200 TVTTLRQRYVFLPAHMRFPYLIHILRQLHDDKNNSIVLFVPTCRLCEELALTLRELDLRC 259
Query: 244 -AIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYI 302
A+ MSQ RL AL+KFK+ +IL+ TDVASRGLDIP+V VINY++P +DY+
Sbjct: 260 TALHSQARMSQKARLDALHKFKSSFIHILLATDVASRGLDIPTVTYVINYNVPRAPEDYV 319
Query: 303 HRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEF-PAEEEEVLLLLERVTEAK 361
HRVGRTARAGR G+AI+L+++ ++E IE+ I KL + ++EE++ + ++ A+
Sbjct: 320 HRVGRTARAGRGGMAITLMDERDIELLQAIEEHINVKLTAYDDIKDEEIVQSMNKINIAR 379
Query: 362 RISQMTIKDSGNKRR 376
R +++ + +SG R
Sbjct: 380 RAAELQLLESGFDER 394
>gi|255721753|ref|XP_002545811.1| hypothetical protein CTRG_00592 [Candida tropicalis MYA-3404]
gi|240136300|gb|EER35853.1| hypothetical protein CTRG_00592 [Candida tropicalis MYA-3404]
Length = 440
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 166/385 (43%), Positives = 235/385 (61%), Gaps = 21/385 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D IG A+TGSGKT AFA P+L + +E+ V F VL+PTRELA+QI+EQF A
Sbjct: 38 GHDCIGGAKTGSGKTIAFAAPMLT---QWSEDPYGV---FGLVLTPTRELALQIAEQFTA 91
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYL 125
LGS ++++ +V+VGG D+++Q L L K+PH V+ATPGRL DH+ N+ ++ L KYL
Sbjct: 92 LGSNMNIKVSVIVGGEDIVKQALELQKKPHFVIATPGRLADHILNSGEETISGLRRVKYL 151
Query: 126 VLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACL---KNPV-- 178
VLDEADRLL++ F L +V+P RQT LF+AT+T V+ L+ K PV
Sbjct: 152 VLDEADRLLSNSFGSDLKRCFDVLPPSEKRQTLLFTATITDAVRALKEKPQTEGKPPVFM 211
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLAL 235
++E K + TL Y FVP+ K+ YL IL + ++ +VF +L
Sbjct: 212 HEVETVDKVAIPSTLSISYVFVPSYVKEAYLNSILNLEKFKDATAVVFVNRTITAEVLRR 271
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
LR L R + M Q++R +L++FKAG ILI TDVASRGLDIP+V++V+N+DIP
Sbjct: 272 TLRKLDFRVASLHSEMPQAERTNSLHRFKAGAARILIATDVASRGLDIPTVELVVNFDIP 331
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP--EFPAEEEEVLLL 353
+ D+IHRVGRTARAGR G A+S++ + +++ IE+ I KK+ E +++ +
Sbjct: 332 ADPDDFIHRVGRTARAGRKGDAVSIIGEKDIDRIQSIEERINKKMELLEDVDDDKVIKDS 391
Query: 354 LERVTEAKRISQMTIKDSGNKRRRK 378
L T AKR S M + R+K
Sbjct: 392 LNVTTAAKRESMMEMDKENFGERKK 416
>gi|255719254|ref|XP_002555907.1| KLTH0H00638p [Lachancea thermotolerans]
gi|238941873|emb|CAR30045.1| KLTH0H00638p [Lachancea thermotolerans CBS 6340]
Length = 433
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/385 (42%), Positives = 229/385 (59%), Gaps = 21/385 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD IG A+TGSGKT AF P+L E F VL+PTRELA+QI+EQF A
Sbjct: 40 GKDCIGGAKTGSGKTIAFGAPMLTKWSEDPS------GMFGVVLTPTRELAMQIAEQFTA 93
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YL 125
LGS +++R A++VGG ++ Q + L ++PH +VATPGR+ H+ N+ ++G LK +L
Sbjct: 94 LGSSMNIRVALVVGGESIVDQAINLQRKPHFIVATPGRMAHHIMNSGEDTIGGLKRAKFL 153
Query: 126 VLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACL---KNPV-- 178
VLDEAD LL D F + L ++++P RQT LF+AT+T +VK LQ A K P+
Sbjct: 154 VLDEADILLTDTFSEHLATCISILPPKEKRQTLLFTATVTDQVKALQNAPAAEGKPPLFS 213
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVS--ASSTMVFTRTCDATRLLAL 235
++E+ K + TLK Y VP + K+ YL ILT + SS ++F +L
Sbjct: 214 YEVESMDKVAIPSTLKTTYLLVPEQVKEAYLYQILTNATYNESSAIIFVNRTVTAEILRR 273
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
L+ L R + M Q +R +L++F+A +LI TDVASRGLDIP+V +VINYDI
Sbjct: 274 TLKQLDVRVASLHSQMPQQERTNSLHRFRANAARVLIATDVASRGLDIPTVQLVINYDIS 333
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--L 353
+N +IHR GRTARAGR+G +I V ++ IE+ I KK+ EF + ++
Sbjct: 334 SNPDTFIHRAGRTARAGRSGESICFVAPRDVSRIEAIEERINKKMEEFKDVHDTAVIRKA 393
Query: 354 LERVTEAKRISQMTIKDSGNKRRRK 378
L +VT AKR S M+++ RRK
Sbjct: 394 LNKVTVAKRESLMSMEKENFGERRK 418
>gi|50551977|ref|XP_503463.1| YALI0E02552p [Yarrowia lipolytica]
gi|74659870|sp|Q6C799.1|DBP8_YARLI RecName: Full=ATP-dependent RNA helicase DBP8
gi|49649332|emb|CAG79042.1| YALI0E02552p [Yarrowia lipolytica CLIB122]
Length = 442
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 163/383 (42%), Positives = 235/383 (61%), Gaps = 23/383 (6%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD IG A+TGSGKT AFA P+L AE + F VL+PTRELAIQI+EQF A
Sbjct: 38 GKDCIGGARTGSGKTIAFAAPML------AEWSKDPCGIFGLVLTPTRELAIQIAEQFTA 91
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNT-----KGFSLGTLK 123
LG+ +++R A++ GGVDM++Q+L L K PH V+ATPGRL DH+ ++ +GF ++
Sbjct: 92 LGANMNIRVALIYGGVDMVKQSLELQKMPHFVIATPGRLADHIRSSGEDTIRGFR--RVR 149
Query: 124 YLVLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQ-RACLKNPVKI 180
Y+V+DEADRLL F L ++++P RQT LF+AT+T V+ L+ R K P I
Sbjct: 150 YVVMDEADRLLTPGFVPDLKTCMDLLPDPSKRQTLLFTATVTDAVRALKDRTGEKGPPFI 209
Query: 181 -EAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALML 237
E AS + TL Q Y F+P ++ YL ILT + S ++F L ML
Sbjct: 210 HEIASDIAVPSTLTQSYLFLPGYVREAYLWAILTHPDNEKKSAIIFVNRTQTAETLRRML 269
Query: 238 RNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTN 297
L + + M Q +R+ AL +F+A +L+ TDVASRGLDIP+V+MVIN+D+P +
Sbjct: 270 MALDVKTASLHSEMRQQERVNALGRFRAQAARVLVATDVASRGLDIPTVEMVINFDLPAD 329
Query: 298 SKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--LLE 355
+ DYIHRVGRTARAGR G ++SLV + ++ IE+ +G K+ ++ E++ ++ L
Sbjct: 330 ADDYIHRVGRTARAGRKGQSVSLVTERDVTRVTNIEERVGTKMEKYDLIEDDKVVEEYLT 389
Query: 356 RVTEAKR--ISQMTIKDSGNKRR 376
+ AKR + M ++ G ++R
Sbjct: 390 PASTAKRQAVLDMEAENFGERKR 412
>gi|149238864|ref|XP_001525308.1| hypothetical protein LELG_03236 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152013494|sp|A5E0U9.1|DBP8_LODEL RecName: Full=ATP-dependent RNA helicase DBP8
gi|146450801|gb|EDK45057.1| hypothetical protein LELG_03236 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 444
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 172/402 (42%), Positives = 240/402 (59%), Gaps = 31/402 (7%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT AFA AL+ +Q F +L+PTRELA+QI+EQF A
Sbjct: 40 GRDCIGGAKTGSGKTIAFA-----ALMLTQWSQDPF-GIFGLILTPTRELALQIAEQFAA 93
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYL 125
LG+ ++++ V+VGG D ++QTL L K+PH V+ATPGRL DH+ N+ ++ L KYL
Sbjct: 94 LGALMNIKVCVVVGGEDFVKQTLELQKKPHFVIATPGRLADHILNSGEETVSGLRRIKYL 153
Query: 126 VLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKNPV-- 178
VLDEADRLL++ F L ++P RQT LF+AT+T VK L+ RA K PV
Sbjct: 154 VLDEADRLLSNSFGSDLQRCFTILPPSEKRQTLLFTATVTDAVKALKDKPRAEGKLPVFL 213
Query: 179 -KIEAA-SKYSTVDTLKQQYRFVPAKYKDCYLVYIL--TEVSASSTMVFTRTCDATRLLA 234
+++A + + TL Y FVP+ K+ YL IL + S+ +VF +L
Sbjct: 214 HQVDAGVDQIAIPKTLSTMYVFVPSYVKEAYLTSILKLPKYEESTAVVFVNRTMTAEVLR 273
Query: 235 LMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDI 294
MLR L + + M Q++R +L++FKAG ILI TDVASRGLDIP+V++V+N+DI
Sbjct: 274 RMLRKLEFKVASLHSEMPQTERTNSLHRFKAGAARILIATDVASRGLDIPTVELVVNFDI 333
Query: 295 PTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLL 354
P + D+IHRVGRTARAGR G AIS++ + ++E IE+ I KK+ LL
Sbjct: 334 PADPDDFIHRVGRTARAGRKGDAISIIGEKDIERIESIEERINKKME-----------LL 382
Query: 355 ERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKK 396
E V + K I+ K + KR + + G + +NKKK
Sbjct: 383 EGVDDDKVINDSLQKATTAKREAMLDMDKESFGERRKVNKKK 424
>gi|304671|gb|AAA16339.1| DEAD-box protein [Drosophila melanogaster]
gi|313850|emb|CAA80804.1| DEAD-box protein [Drosophila melanogaster]
Length = 527
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 165/375 (44%), Positives = 225/375 (60%), Gaps = 22/375 (5%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D IG A+TGSGKT AFALPIL+ L E + FA VL+PT ELA QISEQF
Sbjct: 43 AGQDCIGAAKTGSGKTFAFALPILERLSE------EPVSHFALVLTPTHELAYQISEQFL 96
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
G + +R V+ GG D M ++ L +RPHIVVA PGRL DHLT FS LKYLV+
Sbjct: 97 VAGQAMGVRVCVVSGGTDQMVESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVV 156
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKK-----LQRACLKNPVKIEA 182
DEAD +LN DF++SL I +P+ RQ FSATM +K+ + C +
Sbjct: 157 DEADPMLNGDFDESLSIIERCLPKTRQNLFFSATMKDFIKESSIFPIASDCF----EWCE 212
Query: 183 ASKYSTVDTLKQQYRFVPAKYK-DCYLVYIL----TEVSASSTMVFTRTCDATRLLALML 237
AS TV+TL Y V A Y D L+ L E ++ M+FT T +LL++ L
Sbjct: 213 ASAVRTVETLDHGY-LVSADYDPDMVLIEALRKYREENENANVMIFTNTKKYCQLLSMTL 271
Query: 238 RNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTN 297
+N+ + + G M Q +R+ AL++FK+ + LI TDVA+RGLDIPSV++V+N+ +P
Sbjct: 272 KNMEIDNVCLHGFMRQKERVAALSRFKSNQIRTLIATDVAARGLDIPSVELVMNHILPRT 331
Query: 298 SKDYIHRVGRTARAGRTGVAISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLER 356
K+YIHRVGRTARAGR G++IS+ +LE IE+ I KL E P ++ V + +
Sbjct: 332 PKEYIHRVGRTARAGRKGMSISIFRFPRDLELLAAIEEEINTKLTEHPIDQRMVERIFMQ 391
Query: 357 VTEAKRISQMTIKDS 371
V +R S+M + ++
Sbjct: 392 VNVTRRESEMQLDNN 406
>gi|425768778|gb|EKV07293.1| ATP dependent RNA helicase (Dbp8), putative [Penicillium digitatum
Pd1]
gi|425770200|gb|EKV08673.1| ATP dependent RNA helicase (Dbp8), putative [Penicillium digitatum
PHI26]
Length = 520
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 174/412 (42%), Positives = 249/412 (60%), Gaps = 41/412 (9%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD IG ++TGSGKT AFA+PI+Q + R +A VL+PTRELA+QI EQF A
Sbjct: 127 GKDCIGGSRTGSGKTMAFAVPIMQ------QWARNPFGIYALVLTPTRELALQIYEQFRA 180
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGF----SLGTLKY 124
+ + +++ ++VGGVDM QQ + L RPH+V+ATPGRL DH+ T G L +K
Sbjct: 181 VSAPQNMKPILVVGGVDMRQQAIELANRPHVVIATPGRLADHI-KTSGVDTVAGLRRVKM 239
Query: 125 LVLDEADRLLNDDFEKSLDEI---LNVIPRM--RQTYLFSATMTKKVKKLQR---ACLKN 176
+VLDEADRLL L ++ L +P RQT LF+ATMT +V+ L+ A K
Sbjct: 240 VVLDEADRLLASGPGSMLPDVETCLGALPPSAERQTLLFTATMTAEVRALKSMPAAGNKP 299
Query: 177 PV---KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL-TEVSASSTMV----FTRTCD 228
P+ +I ++ TLKQ Y VP +++ +L +L TEV+ + ++ T+TCD
Sbjct: 300 PIFTTEIGTENQGKIPPTLKQTYLKVPMTHREAFLHALLSTEVNVTKPVIVFCNHTKTCD 359
Query: 229 ATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDM 288
LL LR LG R + + QS+R L +F+A +L+ TDVASRGLDIPSV++
Sbjct: 360 ---LLERTLRRLGHRITSLHSILPQSERTANLARFRATAARVLVATDVASRGLDIPSVEL 416
Query: 289 VINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEE 348
VIN+D+P N DY+HRVGRTARAGR+G A +LV Q ++E L IE+ +G+++ EF E+E
Sbjct: 417 VINFDVPRNPDDYVHRVGRTARAGRSGEATTLVGQRDVELVLAIEERVGRQMEEF--EQE 474
Query: 349 EVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQ-FGINKKKLSK 399
V + E++ + +K+ G+ +R G+ D+ GR G + KL K
Sbjct: 475 GVNI------ESRVVRTGLLKEVGSAKREAAGEIDE--GRDILGRKRNKLKK 518
>gi|429765433|ref|ZP_19297729.1| putative ATP-dependent RNA helicase RhlE [Clostridium celatum DSM
1785]
gi|429186393|gb|EKY27337.1| putative ATP-dependent RNA helicase RhlE [Clostridium celatum DSM
1785]
Length = 426
Score = 277 bits (708), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 210/340 (61%), Gaps = 2/340 (0%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D++G AQTG+GKT AFA+PI+Q ++ N + + A +++PTRELAIQI E F
Sbjct: 38 GRDILGCAQTGTGKTAAFAIPIIQNIVTAKGNSKE-RSIKALIVAPTRELAIQIEENFTI 96
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+ ++ V+ GGV+ Q + ++VATPGRL+D L N + L +KY VLD
Sbjct: 97 YAKYLDIKNTVIFGGVNQTSQVRKINAGVDVLVATPGRLLD-LVNQRHIDLSNVKYFVLD 155
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ + +I++ +P+ RQ LFSATM K+V KL + LKNPVK+E ST
Sbjct: 156 EADRMLDMGMIHDVKKIISKLPKERQNLLFSATMPKEVTKLVNSILKNPVKVEVQPVSST 215
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
+ + Q FVP K K L+++L + S S +VF+RT +A L G ++ I
Sbjct: 216 AEIISQGVYFVPKKNKKSLLIHLLKDESIKSVIVFSRTKHGANKIAKDLEKAGIQSAAIH 275
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ++R ALN FK G +L+ TD+A+RG+DI + VINYD+P ++ Y+HR+GRT
Sbjct: 276 GNKSQNQRQLALNNFKEGNIRVLVATDIAARGIDIDELSHVINYDLPDVAETYVHRIGRT 335
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEE 348
RAG +GVAI+ ++ E + IEK+IGK +P E E
Sbjct: 336 GRAGASGVAITFCDEEEKAMFRSIEKIIGKSIPVLEEEYE 375
>gi|430813904|emb|CCJ28790.1| unnamed protein product [Pneumocystis jirovecii]
Length = 464
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 164/397 (41%), Positives = 234/397 (58%), Gaps = 32/397 (8%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G++ IG A+TGSGKT AF LPI+Q L + FA +L+PTRELA+QIS+Q
Sbjct: 79 GQNCIGSAKTGSGKTMAFTLPIIQIL------SQDPYGVFALILTPTRELALQISDQLAI 132
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YL 125
+G+ I+L+ ++GGVDM+ Q L L KRPHIV+ATPGRL DH+ ++ ++ K +L
Sbjct: 133 IGTSINLKHTTIIGGVDMITQALILVKRPHIVIATPGRLADHIRSSGQETINAFKRVRFL 192
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRM--RQTYLFSATMTKKVKKLQRACL---KNPVKI 180
VLDEADRLL +F K + E + ++P+ RQT LF+AT+T ++KLQ K P+ +
Sbjct: 193 VLDEADRLLTPNFSKDMQECIRILPKAENRQTLLFTATITDAIRKLQTQSSESGKKPLFL 252
Query: 181 EAASKYSTV--DTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALM 236
K S +L Q Y F+P+ K+ YL I E ST+VFT LL M
Sbjct: 253 YNVIKSSVTIPSSLIQTYIFIPSHVKETYLYRIFNTQEYKEKSTIVFTNRTRTAELLCRM 312
Query: 237 LRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPT 296
L + + M Q KR+ +L +FKA ILI TDVASRGLDIP V ++INYD+P
Sbjct: 313 FCILELKVTALHSEMPQKKRIQSLERFKAEASKILIATDVASRGLDIPFVKLIINYDVPK 372
Query: 297 NSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL------PEFPAEEEEV 350
+ DYIHRVGRTARA ++G +I+ V+Q ++ IEK I ++ +F +E
Sbjct: 373 DPNDYIHRVGRTARAEKSGESITFVSQRDILLIQAIEKHISTRMEKNSYISDFKVTQE-- 430
Query: 351 LLLLERVTEAKRISQMTIKDSGNKR---RRKGGDEDD 384
L V+ AK +++++ + G R +RK GD ++
Sbjct: 431 ---LNTVSSAKIEAEISMTNFGKLRENNKRKHGDFNE 464
>gi|391330997|ref|XP_003739937.1| PREDICTED: ATP-dependent RNA helicase DRS1-like [Metaseiulus
occidentalis]
Length = 972
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/406 (37%), Positives = 244/406 (60%), Gaps = 22/406 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D + A+TGSGKT AFALP+L+ L R FA +LSPTRELAIQI+EQF
Sbjct: 55 GRDCLACAKTGSGKTLAFALPVLEKLF------REPYGIFALILSPTRELAIQIAEQFRI 108
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHL----TNTKGFSLGTLKY 124
LG ++L+ ++VGG D++ Q L +RPHIVVATPGRL DHL + K ++
Sbjct: 109 LGKKVNLKDCLVVGGTDIVDQGRELAQRPHIVVATPGRLADHLDFAAEDMKPL-FSKIQM 167
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
L+LDEAD+LL+ + L I + +P+ RQT LFSAT+T+ +++LQ + +P A S
Sbjct: 168 LILDEADQLLSGKYNDQLKMIFSALPKKRQTLLFSATLTRTIQELQMLAMTDPFFYMAPS 227
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASST----MVFTRTCDATRLLALMLRNL 240
+TVD+L Q+ P +D YL+ ++ + ++ ++F T + L+L + +L
Sbjct: 228 SIATVDSLVQRVVLTPDHARDTYLIQVVKQFQEKNSKGLIIIFVATRKKCQALSLGMDSL 287
Query: 241 GQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKD 300
G R + + +Q +R+ AL FK+ IL+ TDVA+RGLDIP V++V+N+++P + K
Sbjct: 288 GFRNVSLHAQRTQRERVAALATFKSSATKILVATDVAARGLDIPRVELVVNHNVPNDPKL 347
Query: 301 YIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
Y+HRVGRTARAG G++++L ++ +IEK +G + + ++ E++ ++ +V A
Sbjct: 348 YVHRVGRTARAGAGGLSVTLATPQDIHLLHEIEKHVGVTMTKMKIDDREIVKIMAQVNVA 407
Query: 361 KRISQMTIKDSG-------NKRRRKGGDEDDDIGRQFGINKKKLSK 399
R +++ + ++ KR+R D +G++ +KKK K
Sbjct: 408 VREAEIRMDETDFEERQLIYKRKRLLLKSQDLMGKRSDASKKKFKK 453
>gi|366994109|ref|XP_003676819.1| hypothetical protein NCAS_0E03920 [Naumovozyma castellii CBS 4309]
gi|342302686|emb|CCC70462.1| hypothetical protein NCAS_0E03920 [Naumovozyma castellii CBS 4309]
Length = 437
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 163/385 (42%), Positives = 232/385 (60%), Gaps = 22/385 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT AFA P+L E F VL+PTRELA+QI+EQF A
Sbjct: 44 GRDCIGGAKTGSGKTVAFAAPMLTKWSEDPSG------MFGVVLTPTRELAMQIAEQFTA 97
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YL 125
LGS +++R A++VGG ++ Q + L K+PH ++ATPGRL H+ ++ ++G LK +L
Sbjct: 98 LGSSMNIRVALVVGGESIVDQAIQLQKKPHFIIATPGRLAHHIMSSGEDTIGGLKRAKFL 157
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRM--RQTYLFSATMTKKVKKLQRACL---KNPV-- 178
VLDEAD LL D F L + +P RQT LF+AT+T +V+ L+ A + K P+
Sbjct: 158 VLDEADSLLTDTFASDLATCIGALPSKDKRQTLLFTATITDQVRALEDAPIQEGKPPLFT 217
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLAL 235
++E+ K + TLK +Y VP K+ YL +LT SS ++F +L
Sbjct: 218 YQVESVDKVAIPSTLKTEYILVPEHVKEAYLYQLLTCETYKDSSAIIFVNRTMTAEILRR 277
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
L +L R + M Q +R +L++F+A +LI TDVASRGLDIP+V++VINYDIP
Sbjct: 278 TLYHLEVRVASLHSQMPQQERTNSLHRFRANVARVLIATDVASRGLDIPTVELVINYDIP 337
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--L 353
+ +IHR GRTARAGR+G AIS V Q ++ IEK I KK+ E + ++
Sbjct: 338 ADPDTFIHRAGRTARAGRSGDAISFVTQRDVSRIEAIEKRINKKMTESDKVHDTAVIRKA 397
Query: 354 LERVTEAKRISQMTI-KDSGNKRRR 377
L +VT+AKR S M + K++ +R+R
Sbjct: 398 LTKVTKAKRESLMAMEKENFGERKR 422
>gi|342885803|gb|EGU85755.1| hypothetical protein FOXB_03603 [Fusarium oxysporum Fo5176]
Length = 539
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 172/396 (43%), Positives = 241/396 (60%), Gaps = 36/396 (9%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA+PILQ E A FA VL+PTRELA+QI EQF+A
Sbjct: 145 GRDCIGGSRTGSGKTVAFAVPILQKWSEDPT------AIFAIVLTPTRELALQIFEQFKA 198
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKY 124
+ S SL+ ++ GG DM Q + +GKRPH+++ATPGRL DH+ T G L ++Y
Sbjct: 199 ISSPQSLKAILVTGGSDMRTQAIEIGKRPHVIIATPGRLADHI-RTSGEDTICGLRRVRY 257
Query: 125 LVLDEADRLLNDDFEKSL----DEILNVIPRM--RQTYLFSATMTKKVKKLQRACLK--- 175
+VLDEADRLLN + S+ +E L+V+P RQT LF+AT+T +V+ L+ +K
Sbjct: 258 VVLDEADRLLNANGPGSMLPDVEECLSVLPPATERQTLLFTATITPEVRALKDMPIKPGK 317
Query: 176 NPVKI-EAASKYSTVDT-LKQQYRFVPAKYKDCYL-VYILTEVSASSTMV-FTRTCDATR 231
PV + E ++ + T LKQ Y P +K+ YL V++LTE + T++ F
Sbjct: 318 QPVFVCEVDTQTLAIPTTLKQMYIKTPVTHKEHYLHVFLLTEANVDKTVILFCNRTSTAD 377
Query: 232 LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVIN 291
L +LR L R + + Q +R+ L +F+A IL+ TDVA+RGLDIP V +VIN
Sbjct: 378 YLHHLLRMLNHRVTSLHSKLPQRQRIDNLARFRASAARILVATDVAARGLDIPEVSLVIN 437
Query: 292 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 351
YD+P + DYIHRVGRTARAGR G A+S V Q ++E L IEK +G+ + + EEE V
Sbjct: 438 YDLPRDPDDYIHRVGRTARAGRKGEAVSFVGQRDVELALTIEKRVGRDMESW--EEEGVN 495
Query: 352 L-------LLERVTEAKRISQMTIKDS---GNKRRR 377
L L+ V+E KR + + +++ G KR+R
Sbjct: 496 LETRVVRDALKIVSEKKREALLEVEEGREVGGKRKR 531
>gi|367016345|ref|XP_003682671.1| hypothetical protein TDEL_0G00930 [Torulaspora delbrueckii]
gi|359750334|emb|CCE93460.1| hypothetical protein TDEL_0G00930 [Torulaspora delbrueckii]
Length = 436
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 166/402 (41%), Positives = 235/402 (58%), Gaps = 28/402 (6%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D IG A+TGSGKT AFA P+L E F VL+PTRELA+QI+EQF A
Sbjct: 44 GGDCIGGAKTGSGKTIAFAAPMLTKWSEDPS------GMFGVVLTPTRELAMQIAEQFTA 97
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYL 125
LGS +++R +++VGG +++Q L L ++PH ++ATPGRL H+ N+ ++G L K+L
Sbjct: 98 LGSSMNIRVSIVVGGESIVKQALELQRKPHFIIATPGRLAHHILNSGEDTVGGLMRAKFL 157
Query: 126 VLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACL---KNPV-- 178
VLDEAD LL F K L+ ++ +P RQT LF+AT+T +V+ LQ A K P+
Sbjct: 158 VLDEADSLLTSTFAKDLNVCVSALPPKDKRQTLLFTATITDQVRALQDAPSQENKPPLYC 217
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLAL 235
++E + TLK +Y +P K+ YL ++LT E SS ++F ++
Sbjct: 218 YEVENVDNVAVPSTLKTEYILIPEYVKEAYLYHLLTSEEYKDSSAIIFVNRTMTAEIMRR 277
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
L+NL R + M Q +R +L +F+A +LI TDVASRGLDIP V++V+NYDIP
Sbjct: 278 TLKNLDIRVASLHSQMPQQERTNSLQRFRANAARVLIATDVASRGLDIPVVELVVNYDIP 337
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLL-- 353
++ YIHR GRTARAGR G AIS + Q ++ IE I KK+ E + ++
Sbjct: 338 SDPDVYIHRSGRTARAGRRGDAISFITQRDISRIEAIETRINKKMEECTLVGDTAVIRKS 397
Query: 354 LERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKK 395
L +VT+AKR S M ++ RRK I RQ +N+K
Sbjct: 398 LNKVTKAKRESLMAMEKENFGERRK-------IQRQKNMNQK 432
>gi|90076578|dbj|BAE87969.1| unnamed protein product [Macaca fascicularis]
Length = 255
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/201 (67%), Positives = 163/201 (81%), Gaps = 7/201 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYK-DCYL 208
V+ L+Q Y F+P+K+K C L
Sbjct: 235 VEKLQQYYIFIPSKFKVKCLL 255
>gi|323304640|gb|EGA58403.1| Dbp8p [Saccharomyces cerevisiae FostersB]
Length = 412
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 235/393 (59%), Gaps = 23/393 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT AFA P+L E F VL+PTRELA+QI+EQF A
Sbjct: 20 GRDCIGGAKTGSGKTIAFAGPMLTKWSEDPS------GMFGVVLTPTRELAMQIAEQFTA 73
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYL 125
LGS +++R +V+VGG ++QQ L L ++PH ++ATPGRL H+ ++ ++G L KYL
Sbjct: 74 LGSSMNIRVSVIVGGESIVQQALDLQRKPHFIIATPGRLAHHIMSSGDDTVGGLMRAKYL 133
Query: 126 VLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACL---KNPV-- 178
VLDEAD LL F L ++ +P RQT LF+AT+T +VK LQ A + K P+
Sbjct: 134 VLDEADILLTSTFADHLATCISALPPKDKRQTLLFTATITDQVKSLQNAPVQKGKPPLFA 193
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLAL 235
++E+ + TLK +Y VP K+ YL +LT E + ++F +L
Sbjct: 194 YQVESVDNVAIPSTLKIEYILVPEHVKEAYLYQLLTCEEYENKTAIIFVNRTMTAEILRR 253
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
L+ L R + M Q +R +L++F+A ILI TDVASRGLDIP+V++V+NYDIP
Sbjct: 254 TLKQLEVRVASLHSQMPQQERTNSLHRFRANAARILIATDVASRGLDIPTVELVVNYDIP 313
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--L 353
++ +IHR GRTARAGR G AIS V Q ++ IE I KK+ E + ++
Sbjct: 314 SDPDVFIHRSGRTARAGRIGDAISFVTQRDVSRIQAIEDRINKKMTETNKVHDTAVIRKA 373
Query: 354 LERVTEAKRISQMTIK--DSGNKRRRKGGDEDD 384
L +VT+AKR S M ++ + G ++R++ ++D
Sbjct: 374 LTKVTKAKRESLMAMQKENFGERKRQQKKKQND 406
>gi|50302587|ref|XP_451229.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690512|sp|Q6CXW0.1|DBP8_KLULA RecName: Full=ATP-dependent RNA helicase DBP8
gi|49640360|emb|CAH02817.1| KLLA0A05203p [Kluyveromyces lactis]
Length = 435
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 162/385 (42%), Positives = 226/385 (58%), Gaps = 21/385 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A TGSGKT AFA P+L E + F VL+PTRELA+QI+EQF A
Sbjct: 41 GRDCIGGANTGSGKTIAFAAPMLTKWSEDPQ------GMFGIVLTPTRELAMQIAEQFTA 94
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YL 125
GS +++R A++VGG ++QQ + L KRPH ++ATPGRL H+ N+ ++G LK +L
Sbjct: 95 FGSAMNIRVAIVVGGESIVQQAIELQKRPHFIIATPGRLAHHVLNSGEDTIGGLKRVKFL 154
Query: 126 VLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACL---KNPV-- 178
VLDEAD LL + F K L ++++P RQ LF+ATMT +VK L A K PV
Sbjct: 155 VLDEADILLTETFSKDLATCVSILPPKNKRQNLLFTATMTDQVKALSDAPQTEGKPPVFT 214
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLAL 235
++E+ + TL+ Y VP K+ YL ILT + SS ++F +L
Sbjct: 215 FEVESVDNVAIPKTLETTYLLVPEHVKESYLYQILTSEKYVKSSCIIFVNRTVTAEILRR 274
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
L++L R + M Q +R ++ +F+A +LI TDVASRGLDIP V++V+NYDIP
Sbjct: 275 TLKSLDVRVTSLHSQMPQQERTNSVQRFRAQAARVLIATDVASRGLDIPIVELVVNYDIP 334
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLL-- 353
N +IHR GRTARAGR G ++ V + +++ IE+ I KK+ EF + ++
Sbjct: 335 GNPDTFIHRAGRTARAGRHGESLCFVTEKDIQRVEAIEERINKKMEEFTDVGDTAVIRKS 394
Query: 354 LERVTEAKRISQMTIKDSGNKRRRK 378
L +VT AKR S M + G RRK
Sbjct: 395 LTKVTAAKRESLMAMDKEGFGERRK 419
>gi|46125837|ref|XP_387472.1| hypothetical protein FG07296.1 [Gibberella zeae PH-1]
gi|91206552|sp|Q4I662.1|DBP8_GIBZE RecName: Full=ATP-dependent RNA helicase DBP8
Length = 547
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 172/396 (43%), Positives = 240/396 (60%), Gaps = 36/396 (9%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA+PILQ E A FA VL+PTRELA+QI EQF+A
Sbjct: 153 GRDCIGGSRTGSGKTMAFAVPILQKWSEDPT------AIFAVVLTPTRELALQIFEQFKA 206
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKY 124
+ S SL+ ++ GG DM Q + +GKRPH+++ATPGRL DH+ T G L ++Y
Sbjct: 207 ISSPQSLKAILVTGGSDMRTQAIEIGKRPHVIIATPGRLADHI-RTSGEDTICGLRRVRY 265
Query: 125 LVLDEADRLLNDDFEKSL----DEILNVIPRM--RQTYLFSATMTKKVKKLQRACLK--- 175
+VLDEADRLLN S+ +E L+V+P RQT LF+AT+T +V+ L+ +K
Sbjct: 266 VVLDEADRLLNATGPGSMLPDVEECLSVLPPATERQTLLFTATITPEVRALKDMPIKPGK 325
Query: 176 NPVKI-EAASKYSTVD-TLKQQYRFVPAKYKDCYL-VYILTEVSASSTMV-FTRTCDATR 231
PV + E ++ + TLKQ Y VP +K+ YL ++LTE + T++ F
Sbjct: 326 QPVFVCEVDTQTLAIPATLKQMYIKVPVTHKEHYLHTFLLTEANVDKTVILFCNRTSTAD 385
Query: 232 LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVIN 291
L +LR L R + + Q +R+ L +F+A IL+ TDVA+RGLDIP V +VIN
Sbjct: 386 YLHHLLRMLEHRVTSLHSKLPQRQRIDNLARFRASAARILVATDVAARGLDIPEVSLVIN 445
Query: 292 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 351
YD+P + DYIHRVGRTARAGR G A+S V Q ++E L IEK +G+ + + EEE V
Sbjct: 446 YDLPRDPDDYIHRVGRTARAGRKGEAVSFVGQRDVELALTIEKRVGRDMEAW--EEEGVN 503
Query: 352 L-------LLERVTEAKRISQMTIKDS---GNKRRR 377
L L+ V+E KR + + +++ G KR+R
Sbjct: 504 LETRVVRDALKLVSEKKREALLEVEEGREVGGKRKR 539
>gi|323333197|gb|EGA74596.1| Dbp8p [Saccharomyces cerevisiae AWRI796]
Length = 431
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 235/393 (59%), Gaps = 23/393 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT AFA P+L E F VL+PTRELA+QI+EQF A
Sbjct: 39 GRDCIGGAKTGSGKTIAFAGPMLTKWSEDPS------GMFGVVLTPTRELAMQIAEQFTA 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYL 125
LGS +++R +V+VGG ++QQ L L ++PH ++ATPGRL H+ ++ ++G L KYL
Sbjct: 93 LGSSMNIRVSVIVGGESIVQQALDLQRKPHFIIATPGRLAHHIMSSGDDTVGGLMRAKYL 152
Query: 126 VLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACL---KNPV-- 178
VLDEAD LL F L ++ +P RQT LF+AT+T +VK LQ A + K P+
Sbjct: 153 VLDEADILLTSTFADHLATCISALPPKDKRQTLLFTATITDQVKSLQNAPVQKGKPPLFA 212
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLAL 235
++E+ + TLK +Y VP K+ YL +LT E + ++F +L
Sbjct: 213 YQVESVDNVAIPSTLKIEYILVPEHVKEAYLYQLLTCEEYENKTAIIFVNRTMTAEILRR 272
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
L+ L R + M Q +R +L++F+A ILI TDVASRGLDIP+V++V+NYDIP
Sbjct: 273 TLKQLEVRVASLHSQMPQQERTNSLHRFRANAARILIATDVASRGLDIPTVELVVNYDIP 332
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--L 353
++ +IHR GRTARAGR G AIS V Q ++ IE I KK+ E + ++
Sbjct: 333 SDPDVFIHRSGRTARAGRIGDAISFVTQRDVSRIQAIEDRINKKMTEANKVHDTAVIRKA 392
Query: 354 LERVTEAKRISQMTIK--DSGNKRRRKGGDEDD 384
L +VT+AKR S M ++ + G ++R++ ++D
Sbjct: 393 LTKVTKAKRESLMAMQKENFGERKRQQKKKQND 425
>gi|6321963|ref|NP_012039.1| ATP-dependent RNA helicase DBP8 [Saccharomyces cerevisiae S288c]
gi|731740|sp|P38719.1|DBP8_YEAST RecName: Full=ATP-dependent RNA helicase DBP8; AltName: Full=DEAD
box protein 8
gi|160380633|sp|A6ZT77.1|DBP8_YEAS7 RecName: Full=ATP-dependent RNA helicase DBP8; AltName: Full=DEAD
box protein 8
gi|458901|gb|AAB68014.1| Yhr169wp [Saccharomyces cerevisiae]
gi|151944115|gb|EDN62408.1| DEAD box protein [Saccharomyces cerevisiae YJM789]
gi|207344531|gb|EDZ71646.1| YHR169Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273978|gb|EEU08896.1| Dbp8p [Saccharomyces cerevisiae JAY291]
gi|259146927|emb|CAY80183.1| Dbp8p [Saccharomyces cerevisiae EC1118]
gi|285810075|tpg|DAA06862.1| TPA: ATP-dependent RNA helicase DBP8 [Saccharomyces cerevisiae
S288c]
gi|323308784|gb|EGA62022.1| Dbp8p [Saccharomyces cerevisiae FostersO]
gi|323337360|gb|EGA78613.1| Dbp8p [Saccharomyces cerevisiae Vin13]
gi|323348321|gb|EGA82570.1| Dbp8p [Saccharomyces cerevisiae Lalvin QA23]
gi|323354703|gb|EGA86538.1| Dbp8p [Saccharomyces cerevisiae VL3]
gi|349578721|dbj|GAA23886.1| K7_Dbp8p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765263|gb|EHN06775.1| Dbp8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 431
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 235/393 (59%), Gaps = 23/393 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT AFA P+L E F VL+PTRELA+QI+EQF A
Sbjct: 39 GRDCIGGAKTGSGKTIAFAGPMLTKWSEDPS------GMFGVVLTPTRELAMQIAEQFTA 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYL 125
LGS +++R +V+VGG ++QQ L L ++PH ++ATPGRL H+ ++ ++G L KYL
Sbjct: 93 LGSSMNIRVSVIVGGESIVQQALDLQRKPHFIIATPGRLAHHIMSSGDDTVGGLMRAKYL 152
Query: 126 VLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACL---KNPV-- 178
VLDEAD LL F L ++ +P RQT LF+AT+T +VK LQ A + K P+
Sbjct: 153 VLDEADILLTSTFADHLATCISALPPKDKRQTLLFTATITDQVKSLQNAPVQKGKPPLFA 212
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLAL 235
++E+ + TLK +Y VP K+ YL +LT E + ++F +L
Sbjct: 213 YQVESVDNVAIPSTLKIEYILVPEHVKEAYLYQLLTCEEYENKTAIIFVNRTMTAEILRR 272
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
L+ L R + M Q +R +L++F+A ILI TDVASRGLDIP+V++V+NYDIP
Sbjct: 273 TLKQLEVRVASLHSQMPQQERTNSLHRFRANAARILIATDVASRGLDIPTVELVVNYDIP 332
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--L 353
++ +IHR GRTARAGR G AIS V Q ++ IE I KK+ E + ++
Sbjct: 333 SDPDVFIHRSGRTARAGRIGDAISFVTQRDVSRIQAIEDRINKKMTETNKVHDTAVIRKA 392
Query: 354 LERVTEAKRISQMTIK--DSGNKRRRKGGDEDD 384
L +VT+AKR S M ++ + G ++R++ ++D
Sbjct: 393 LTKVTKAKRESLMAMQKENFGERKRQQKKKQND 425
>gi|408399615|gb|EKJ78713.1| hypothetical protein FPSE_01081 [Fusarium pseudograminearum CS3096]
Length = 544
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 172/396 (43%), Positives = 240/396 (60%), Gaps = 36/396 (9%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA+PILQ E A FA VL+PTRELA+QI EQF+A
Sbjct: 150 GRDCIGGSRTGSGKTMAFAVPILQKWSEDPT------AIFAVVLTPTRELALQIFEQFKA 203
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKY 124
+ S SL+ ++ GG DM Q + +GKRPH+++ATPGRL DH+ T G L ++Y
Sbjct: 204 ISSPQSLKAILVTGGSDMRTQAIEIGKRPHVIIATPGRLADHI-RTSGEDTICGLRRVRY 262
Query: 125 LVLDEADRLLNDDFEKSL----DEILNVIPRM--RQTYLFSATMTKKVKKLQRACLK--- 175
+VLDEADRLLN S+ +E L+V+P RQT LF+AT+T +V+ L+ +K
Sbjct: 263 VVLDEADRLLNATGPGSMLPDVEECLSVLPPATERQTLLFTATITPEVRALKDMPIKPGK 322
Query: 176 NPVKI-EAASKYSTVD-TLKQQYRFVPAKYKDCYL-VYILTEVSASSTMV-FTRTCDATR 231
PV + E ++ + TLKQ Y VP +K+ YL ++LTE + T++ F
Sbjct: 323 QPVFVCEVDTQTLAIPATLKQMYIKVPVTHKEHYLHTFLLTEANVDKTVILFCNRTSTAD 382
Query: 232 LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVIN 291
L +LR L R + + Q +R+ L +F+A IL+ TDVA+RGLDIP V +VIN
Sbjct: 383 YLHHLLRMLEHRVTSLHSKLPQRQRIDNLARFRASAARILVATDVAARGLDIPEVSLVIN 442
Query: 292 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 351
YD+P + DYIHRVGRTARAGR G A+S V Q ++E L IEK +G+ + + EEE V
Sbjct: 443 YDLPRDPDDYIHRVGRTARAGRKGEAVSFVGQRDVELALTIEKRVGRDMEAW--EEEGVN 500
Query: 352 L-------LLERVTEAKRISQMTIKDS---GNKRRR 377
L L+ V+E KR + + +++ G KR+R
Sbjct: 501 LETRVVRDALKLVSEKKREALLEVEEGREVGGKRKR 536
>gi|307721464|ref|YP_003892604.1| DEAD/DEAH box helicase [Sulfurimonas autotrophica DSM 16294]
gi|306979557|gb|ADN09592.1| DEAD/DEAH box helicase domain protein [Sulfurimonas autotrophica
DSM 16294]
Length = 423
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 151/337 (44%), Positives = 210/337 (62%), Gaps = 6/337 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
KD+ AQTG+GKT AFALPILQ + + E++ A +LSPTREL+IQI E A
Sbjct: 39 KDVFATAQTGTGKTAAFALPILQKMRKHVESK----GVRAIILSPTRELSIQIYEDITAY 94
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
+ ++ +LVGG D+ +Q AL K IV+ATPGRL++H+ N G SL ++ VLDE
Sbjct: 95 SKYMDIKTTILVGGKDLQKQREALKKGTEIVIATPGRLLEHIEN--GLSLKDVEVFVLDE 152
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADR+L+ F K + +I ++P+ QT LFSAT + KV+KL + L P IE A K +TV
Sbjct: 153 ADRMLDMGFTKDIRKIHPLLPKRHQTLLFSATFSDKVRKLSKLILTKPAFIETAKKNTTV 212
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
DT+ Q V K L Y++ + +VFTRT + L+ L+ G + I G
Sbjct: 213 DTINQVAYLVDTVRKAELLAYLIGSRNFPQVLVFTRTKVSADALSEELKKDGLKCGVIHG 272
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+++ RL LN+FK G+ +L+ TD+ASRGLDI + VINY++P+ +DY+HRVGRT
Sbjct: 273 DRTKANRLKTLNQFKEGKIRVLVATDIASRGLDIEELPYVINYELPSIPEDYVHRVGRTG 332
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAE 346
RAGR G AISL++ YE IEKLIG+K+P+ E
Sbjct: 333 RAGREGEAISLIDIYEKYDIKDIEKLIGQKIPQETVE 369
>gi|392298981|gb|EIW10076.1| Dbp8p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 431
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 162/393 (41%), Positives = 235/393 (59%), Gaps = 23/393 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT AFA P+L E F VL+PTRELA+QI+EQF A
Sbjct: 39 GRDCIGGAKTGSGKTIAFAGPMLTKWSEDPS------GMFGVVLTPTRELAMQIAEQFTA 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYL 125
LGS +++R +V+VGG ++QQ L L ++PH ++ATPGRL H+ ++ ++G L KYL
Sbjct: 93 LGSSMNIRVSVIVGGESIVQQALDLQRKPHFIIATPGRLAHHIMSSGDDTVGGLMRAKYL 152
Query: 126 VLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACL---KNPV-- 178
VLDEAD LL F L ++ +P RQT LF+AT+T +VK LQ A + K P+
Sbjct: 153 VLDEADILLTSTFADHLATCISALPPKDKRQTLLFTATITDQVKSLQNAPVQKGKPPLFA 212
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLAL 235
++E+ + TLK +Y +P K+ YL +LT E + ++F +L
Sbjct: 213 YQVESVDNVAIPSTLKIEYILIPEHVKEAYLYQLLTCEEYENKTAIIFVNRTMTAEILRR 272
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
L+ L R + M Q +R +L++F+A ILI TDVASRGLDIP+V++V+NYDIP
Sbjct: 273 TLKQLEVRVASLHSQMPQQERTNSLHRFRANAARILIATDVASRGLDIPTVELVVNYDIP 332
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--L 353
++ +IHR GRTARAGR G AIS V Q ++ IE I KK+ E + ++
Sbjct: 333 SDPDVFIHRSGRTARAGRIGDAISFVTQRDVSRIQAIEDRINKKMTETNKVHDTAVIRKA 392
Query: 354 LERVTEAKRISQMTIK--DSGNKRRRKGGDEDD 384
L +VT+AKR S M ++ + G ++R++ ++D
Sbjct: 393 LTKVTKAKRESLMAMQKENFGERKRQQKKKQND 425
>gi|404448789|ref|ZP_11013781.1| DNA/RNA helicase [Indibacter alkaliphilus LW1]
gi|403765513|gb|EJZ26391.1| DNA/RNA helicase [Indibacter alkaliphilus LW1]
Length = 398
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 146/333 (43%), Positives = 208/333 (62%), Gaps = 4/333 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G DL+G AQTG+GKT AF++PI+Q L + +++ P A +L+PTRELAIQI+E +
Sbjct: 38 GNDLLGCAQTGTGKTAAFSIPIIQLL---STQKQSRPGIKALILTPTRELAIQINESLAS 94
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G +R V+ GGV + QT AL + I+VATPGRL+D L N K L L+ VLD
Sbjct: 95 YGKFTKIRHTVIFGGVSQLHQTNALKRGVDILVATPGRLLD-LINQKYIDLRHLEIFVLD 153
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F + +++N+IP RQT FSATM +++KL LKNP +E ST
Sbjct: 154 EADRMLDMGFIHDVKKLINIIPTKRQTLFFSATMPSEIQKLADTLLKNPKYVEVTPPSST 213
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ + Q+ F K L+++L + + S +VF RT + + +L+ G +A I
Sbjct: 214 VEKITQKLYFTNKNDKAKLLIHLLEKENIGSALVFGRTKHGSDKVVKLLQREGIKAAAIH 273
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ+ R ALN FK G+ IL+ TD+A+RG+DI + V NYD+P + Y+HR+GRT
Sbjct: 274 GNKSQNARQNALNDFKNGKIRILVATDIAARGIDIDELATVFNYDLPNIPETYVHRIGRT 333
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
RAG +GVAIS +Q ++ Y IEKLIG K+P
Sbjct: 334 GRAGNSGVAISFADQDTMKEYRDIEKLIGIKIP 366
>gi|255942321|ref|XP_002561929.1| Pc18g00830 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586662|emb|CAP94307.1| Pc18g00830 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 520
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 169/412 (41%), Positives = 245/412 (59%), Gaps = 41/412 (9%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD IG ++TGSGKT AFA+PI+Q + R +A VL+PTRELA+QI EQF A
Sbjct: 127 GKDCIGGSRTGSGKTMAFAVPIMQ------QWARNPFGIYALVLTPTRELALQIYEQFRA 180
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYL 125
+ + +++ ++VGG+DM QQ + L RPH+V+ATPGRL DH+ + ++ L K +
Sbjct: 181 VSAPQNMKPILVVGGMDMRQQAIELASRPHVVIATPGRLADHIKTSGEDTVAGLRRVKMV 240
Query: 126 VLDEADRLLNDDFEKSLDEI---LNVIPRM--RQTYLFSATMTKKVKKLQR---ACLKNP 177
VLDEADRLL L ++ L +P RQT LF+ATMT +V+ L+ A K P
Sbjct: 241 VLDEADRLLASGPGSMLPDVETCLGALPPSAERQTLLFTATMTAEVRALKSMPAAGNKPP 300
Query: 178 V---KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL-TEVSASSTMV----FTRTCDA 229
+ +I ++ TLKQ Y VP +++ +L +L TEV+ + ++ T+TCD
Sbjct: 301 IFMTEIGTENQGKIPPTLKQTYLKVPMTHREAFLHALLSTEVNVTKPVIVFCNHTKTCD- 359
Query: 230 TRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMV 289
LL LR LG R + + QS+R L +F+A +L+ TDVASRGLDIPSV++V
Sbjct: 360 --LLERTLRRLGHRITSLHSILPQSERTANLARFRATAARVLVATDVASRGLDIPSVELV 417
Query: 290 INYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEE 349
INY++P N DY+HRVGRTARAGR+G A +L+ Q ++E L IE+ +G+++ EF E
Sbjct: 418 INYEVPRNPDDYVHRVGRTARAGRSGEATTLIGQRDVELVLAIEERVGRQMEEFAQEGVN 477
Query: 350 VLLLLERVTEAKRISQMTIKDSGNKRRRKGG--DEDDDIGRQFGINKKKLSK 399
+ E++ + +K+ G+ +R G DE DI G + KL K
Sbjct: 478 I--------ESRVVRTGLLKEVGSAKREAAGEIDEGRDI---LGRKRNKLKK 518
>gi|121606092|ref|YP_983421.1| DEAD/DEAH box helicase [Polaromonas naphthalenivorans CJ2]
gi|120595061|gb|ABM38500.1| DEAD/DEAH box helicase domain protein [Polaromonas
naphthalenivorans CJ2]
Length = 487
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 160/374 (42%), Positives = 222/374 (59%), Gaps = 14/374 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
GKD++G AQTG+GKT AFALP+LQ +++ EN T PA A VL PTRELA+Q++EQ
Sbjct: 40 GKDVMGAAQTGTGKTAAFALPLLQRMMK-HENASTSPARHPVRALVLLPTRELAVQVAEQ 98
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+ +L AV+ GG+DM QTL L K ++VATPGRL+DH+ K L ++Y+
Sbjct: 99 VKLYAKYTNLNSAVVFGGMDMKPQTLELKKGVEVLVATPGRLLDHI-EAKNTVLNQVEYV 157
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L++PV IE A
Sbjct: 158 VLDEADRMLDIGFLPDLQRILSYLPKQRITLLFSATFSPEIKRLAASFLQDPVTIEVARS 217
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T T++Q + V A K L IL VF + LA L G +
Sbjct: 218 NATAATVEQHFYSVGADDKRRALHQILKARDLKQAFVFVNSKLGCARLARSLEREGLKTT 277
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL FK+GE ++L+CTDVA+RGLDI V V N+D+P N++DY+HR+
Sbjct: 278 ALHGDKSQDERLKALESFKSGEVDLLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRI 337
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
GRT RAG +G+A+S V + IEKLI K+ P E EE + RIS+
Sbjct: 338 GRTGRAGASGLAVSFVAASDQRLVTDIEKLIKTKIEIEPMEFEE---------DTPRISE 388
Query: 366 MTIKDSGNKRRRKG 379
+ G + R+G
Sbjct: 389 QGRINDGRRMYREG 402
>gi|403360910|gb|EJY80150.1| hypothetical protein OXYTRI_22568 [Oxytricha trifallax]
Length = 488
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 162/387 (41%), Positives = 231/387 (59%), Gaps = 32/387 (8%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GK++IG AQTGSGKT FALP+LQ L A + V F +L+P+REL +QI + E+
Sbjct: 45 GKNIIGCAQTGSGKTACFALPMLQKL---AADPYGV---FGLILAPSRELCMQIKQSIES 98
Query: 69 -LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTK-GFS--LGTLKY 124
+G +++R VLVGGVD M+Q L + PHI++A PGR++ +L N G L L++
Sbjct: 99 FVGQNMNIRVCVLVGGVDYMKQIKELQEIPHIIIACPGRMVHYLDNDHYGLKDYLQNLQF 158
Query: 125 LVLDEADRLLNDDFEKS-LDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPV----- 178
LV DEADR+L +D KS L +IL ++P RQT LFSATM V+ R KN +
Sbjct: 159 LVFDEADRMLTEDTMKSDLVKILEILPNERQTLLFSATM---VQNYDRNISKNLIFGEDN 215
Query: 179 --------KIEAASK--YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASST---MVFTR 225
EAA++ TV L Q+ F+P K+ YL+Y+L ++FT
Sbjct: 216 KREMVGIGNTEAANEEFQKTVQNLDQKIVFIPENVKEAYLIYLLKNQKLKKQQQCIIFTS 275
Query: 226 TCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPS 285
TC LA++L+ L A I ++Q KRL L +FK+ I++ TDVASRGLD+P
Sbjct: 276 TCKNCHFLAMLLQELEFDATFIHSQLNQRKRLNNLARFKSNYTKIIVATDVASRGLDMPL 335
Query: 286 VDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA 345
V VIN+DIP N KDY+HRVGRTARAGR G ++SLV QY+++ L EK +G K+ +
Sbjct: 336 VQTVINFDIPKNPKDYVHRVGRTARAGRGGNSVSLVTQYDIDLILACEKYVGIKIDKLEL 395
Query: 346 EEEEVLLLLERVTEAKRISQMTIKDSG 372
E+EVL + + + ++ ++ + + G
Sbjct: 396 NEKEVLDDINHIMKVMQVVRIKMAEQG 422
>gi|345564525|gb|EGX47487.1| hypothetical protein AOL_s00083g423 [Arthrobotrys oligospora ATCC
24927]
Length = 451
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 158/392 (40%), Positives = 244/392 (62%), Gaps = 37/392 (9%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GK+ IG ++TGSGKT AFA+PILQ A++ V FA +L+PTRELA+Q++EQF A
Sbjct: 40 GKNCIGGSRTGSGKTVAFAVPILQMW---AQDPFGV---FALILTPTRELALQLAEQFTA 93
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YL 125
LGS +L+ ++++GGVDM Q ++L ++PH+V+ATPGRL DH+ ++ ++ L+ +
Sbjct: 94 LGSPQNLKLSLIIGGVDMRTQAISLSQKPHVVIATPGRLADHIRSSGADTIAGLRRVRVV 153
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRM----------RQTYLFSATMTKKVKKLQRACLK 175
V+DEADRLL++ F + L E L+V+P RQT LF+AT+T+ V+ L+ +
Sbjct: 154 VMDEADRLLDEGFAEELVECLSVVPDQFGDKTKGIPARQTLLFTATVTESVRALKEGEGR 213
Query: 176 NPVKIEAASKYSTVDT--------LKQQYRFVPAKYKDCYLVYILTEVS--ASSTMVFTR 225
K S +DT L Q Y F P+ +L +L+ ST++FT
Sbjct: 214 AREKGGREVFISEIDTDSLAVPPTLHQTYIFKPSTVHLAFLHTLLSTPGNIKKSTIIFTN 273
Query: 226 TCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPS 285
+LL+ L+ LG R P+ +SQ +R +L +F+AG ILI TDVA RGLDIP
Sbjct: 274 KKTTAQLLSHTLKPLGHRVTPLHSDLSQRERTDSLGRFRAGAARILIATDVAGRGLDIPE 333
Query: 286 VDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA 345
V++VIN+D+P + DYIHR+GRTARAG+ G +++ V++ ++ IE+ +G+++ E+
Sbjct: 334 VELVINFDVPRDPDDYIHRIGRTARAGKKGESLTFVDEKDVLLIKAIEERVGREMVEY-K 392
Query: 346 EEEEVLL-------LLERVTEAKRISQMTIKD 370
EEE V L L++V+EAKR++ + I++
Sbjct: 393 EEEGVSLEGRVVREELKKVSEAKRVAMLNIEE 424
>gi|67537466|ref|XP_662507.1| hypothetical protein AN4903.2 [Aspergillus nidulans FGSC A4]
gi|74657196|sp|Q5B3H7.1|DBP8_EMENI RecName: Full=ATP-dependent RNA helicase dbp8
gi|40741791|gb|EAA60981.1| hypothetical protein AN4903.2 [Aspergillus nidulans FGSC A4]
gi|259482230|tpe|CBF76513.1| TPA: ATP-dependent RNA helicase dbp8 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B3H7] [Aspergillus
nidulans FGSC A4]
Length = 525
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 166/398 (41%), Positives = 241/398 (60%), Gaps = 38/398 (9%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AF++PILQ + AE+ FA +L+PTRELA+QI EQ +A
Sbjct: 132 GRDCIGGSRTGSGKTIAFSVPILQ---KWAEDPF---GIFAVILTPTRELALQIFEQIKA 185
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGF----SLGTLKY 124
+ + S++ ++ GG DM Q + L RPH+VVATPGRL DH+ NT G L ++
Sbjct: 186 ISAPQSMKPVLITGGTDMRSQAIELAGRPHVVVATPGRLADHI-NTSGTDTVAGLKRVRM 244
Query: 125 LVLDEADRLLNDDFEKSLDEILNVI-----PRMRQTYLFSATMTKKVKKLQ---RACLKN 176
+VLDEADRLL+ L ++ + P RQT LF+AT+T +V+ L+ + K
Sbjct: 245 VVLDEADRLLSPGPGSMLPDVETCLSFLPGPSQRQTLLFTATLTPEVRALKSMPQTPGKP 304
Query: 177 PV---KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVS--ASSTMVFTRTCDATR 231
P+ +I +K + TL+ Y VP +++ +L +L+ S S +VFT T +
Sbjct: 305 PIFVTEISTEAKDTVPPTLRTTYVQVPLTHREAFLHVLLSTESNITKSAIVFTNTTKSAD 364
Query: 232 LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVIN 291
LL +LR+LG R + + QS+R L +F+A +L+ TDVASRGLDIPSV +V+N
Sbjct: 365 LLERLLRSLGHRVTSLHSLLPQSERNSNLARFRASAARVLVATDVASRGLDIPSVSLVVN 424
Query: 292 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 351
+++P N DY+HRVGRTARAGRTG A++LV Q +++ L IE+ IG+K+ E+ EEE V
Sbjct: 425 FEVPRNPDDYVHRVGRTARAGRTGEAVTLVGQRDVQLVLAIEERIGRKMVEY--EEEGVN 482
Query: 352 L--------LLERVTEAKRISQMTIKDS----GNKRRR 377
L LL+ V AKR + + I + G KR +
Sbjct: 483 LEARVAKGSLLKEVGAAKREAMVEIDEGRDVLGRKRNK 520
>gi|295671282|ref|XP_002796188.1| ATP-dependent RNA helicase DBP8 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226284321|gb|EEH39887.1| ATP-dependent RNA helicase DBP8 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 543
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 162/379 (42%), Positives = 229/379 (60%), Gaps = 34/379 (8%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA PILQ E FA VL+PTRELA+QI EQ +A
Sbjct: 150 GRDCIGGSRTGSGKTVAFAAPILQKWSEDPL------GIFAVVLTPTRELALQIFEQIKA 203
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKY 124
+ + SL+ ++ GG +M Q +AL +RPH+V+ATPGRL DH+ N+ G L ++
Sbjct: 204 ISAPQSLKPILITGGTEMRPQAIALSQRPHVVIATPGRLADHI-NSSGRDTICGLNRARF 262
Query: 125 LVLDEADRLLND---DFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKN 176
+VLDEADRLL L+ L+ +P RQT LF+AT+T +V+ L+ R K
Sbjct: 263 VVLDEADRLLESGPGSMLPDLETCLSALPPSTARQTLLFTATVTPEVRALKSMPRPASKP 322
Query: 177 PV---KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASS--TMVFTRTCDATR 231
P+ +I ++ + TLKQ Y VP +++ +L +L+ SS ++F
Sbjct: 323 PIFVTEISTENQATIPRTLKQSYLLVPLTHREAFLHVLLSTEGNSSKAAIIFCNRTKTAD 382
Query: 232 LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVIN 291
LL MLR LG RA + + QS+R L++F+A IL+ TDVA+RGLDIPSV +VIN
Sbjct: 383 LLERMLRRLGHRATSLHSLLPQSERTANLSRFRASAAPILVATDVAARGLDIPSVSLVIN 442
Query: 292 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 351
+D+P N DY+HRVGRTARAGR G A++LV Q +++ L IE +G+K+ E+ +EE V
Sbjct: 443 FDVPRNPDDYVHRVGRTARAGREGEAVTLVGQRDVQLVLAIEDRVGRKMEEW--KEEGVS 500
Query: 352 L--------LLERVTEAKR 362
+ +L+ V EAKR
Sbjct: 501 IEGRIVRGGILKEVGEAKR 519
>gi|398803769|ref|ZP_10562787.1| DNA/RNA helicase, superfamily II [Polaromonas sp. CF318]
gi|398096022|gb|EJL86353.1| DNA/RNA helicase, superfamily II [Polaromonas sp. CF318]
Length = 481
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 161/376 (42%), Positives = 222/376 (59%), Gaps = 14/376 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
GKD++G AQTG+GKT AF+LP+LQ +++ EN T PA A VL PTRELA+Q+++Q
Sbjct: 40 GKDVMGAAQTGTGKTAAFSLPLLQRMMK-HENPSTSPARHPVRALVLLPTRELAVQVAQQ 98
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
E +LR V+ GG+DM QT L K ++VATPGRL+DH+ K L ++Y+
Sbjct: 99 VELYAKYTNLRSTVVFGGMDMKPQTAELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYV 157
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L++PV IE A
Sbjct: 158 VLDEADRMLDIGFLPDLQRILSYLPKQRITLLFSATFSPEIKRLASSYLQDPVTIEVARS 217
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T T++Q + V A K L IL E VF + LA L G +
Sbjct: 218 NATASTVEQHFYSVGADDKRRALHQILKERGMKQAFVFVNSKLGCARLARSLEREGLKTA 277
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL FK GE ++L+CTDVA+RGLDI V V N+D+P N++DY+HR+
Sbjct: 278 ALHGDKSQDERLKALEAFKKGEVDLLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRI 337
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
GRT RAG +G+A+S V + IEKLI K+ P E EE R+ E RI
Sbjct: 338 GRTGRAGASGLAVSFVASSDNRLVADIEKLIKTKIELEPLEFEED---RPRIKEQGRI-- 392
Query: 366 MTIKDSGNKRRRKGGD 381
+ G + R+G D
Sbjct: 393 ----NDGRRMYREGED 404
>gi|448100218|ref|XP_004199301.1| Piso0_002734 [Millerozyma farinosa CBS 7064]
gi|359380723|emb|CCE82964.1| Piso0_002734 [Millerozyma farinosa CBS 7064]
Length = 437
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 176/408 (43%), Positives = 248/408 (60%), Gaps = 39/408 (9%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFAC--VLSPTRELAIQISEQF 66
G D IG A+TGSGKT AFA PIL E + C VL+PTRELA+QI+EQF
Sbjct: 38 GHDCIGGAKTGSGKTIAFASPILTKWSE--------DPYGICGLVLTPTRELALQIAEQF 89
Query: 67 EALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---K 123
ALG+ ++++ V+VGG D+++Q L L +RPHIV+ATPGRL DH+ N+ ++ L K
Sbjct: 90 AALGATMNIKVCVIVGGDDIVKQALELQRRPHIVIATPGRLADHILNSGEDTICGLRRVK 149
Query: 124 YLVLDEADRLLNDDFEKSLDEILNVIPR--MRQTYLFSATMTKKVKKLQRACL---KNPV 178
YLVLDEADRLL++ F L+ V+P+ RQT LF+AT+T V+ L+ + K PV
Sbjct: 150 YLVLDEADRLLSNSFGSDLERCFGVLPKPENRQTLLFTATITDAVRSLKEKPVPEGKLPV 209
Query: 179 ---KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLL 233
+++ + TL +Y FVP+ K+ YL +LT E ++T++F LL
Sbjct: 210 FVNEVDTVENIAIPSTLSIKYLFVPSYVKEAYLHNLLTLPEYEKTTTIIFVNRTHTAELL 269
Query: 234 ALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYD 293
MLR L R + M QS+R+ +L++FKA ILI TDVASRGLDIP V++V+NYD
Sbjct: 270 RRMLRRLDFRVASLHSEMPQSERVNSLHRFKANAARILIATDVASRGLDIPDVNLVVNYD 329
Query: 294 IPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLL 353
IP + D+IHRVGRTARAGR G +IS+V + ++ L IE+ I KK+ +
Sbjct: 330 IPADPDDFIHRVGRTARAGRKGDSISIVAEKDVNRILAIEERINKKMEK----------- 378
Query: 354 LERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKKLSKRK 401
+E VT+ K I ++++K++ +R D D D FG KK+ +K K
Sbjct: 379 MEDVTDNKVI-KISLKETSVAKREAMMDMDKD---SFG-EKKRTNKMK 421
>gi|45190904|ref|NP_985158.1| AER301Cp [Ashbya gossypii ATCC 10895]
gi|74693373|sp|Q756G5.1|DBP8_ASHGO RecName: Full=ATP-dependent RNA helicase DBP8
gi|44983946|gb|AAS52982.1| AER301Cp [Ashbya gossypii ATCC 10895]
gi|374108383|gb|AEY97290.1| FAER301Cp [Ashbya gossypii FDAG1]
Length = 435
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/386 (42%), Positives = 225/386 (58%), Gaps = 21/386 (5%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D IG A+TGSGKT AFA P+L + F VL+PTRELA+QI+EQF
Sbjct: 42 AGRDCIGGAKTGSGKTIAFAAPML------TKWSADPCGMFGIVLTPTRELAMQIAEQFT 95
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---Y 124
ALGS +++R A++VGG D++ Q L L ++PH ++ATPGRL H+ ++ ++G LK Y
Sbjct: 96 ALGSVMNIRVALVVGGEDIVSQALELQRKPHFIIATPGRLAHHIMHSGEDTIGGLKRVRY 155
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRA---CLKNPV- 178
LVLDEAD LL D F +L + ++P RQ LF+ATMT +V L+ A K P+
Sbjct: 156 LVLDEADILLTDTFSDALATCVQILPPKEKRQNLLFTATMTDQVLALKDAPPTSGKPPLF 215
Query: 179 --KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLA 234
+E + +L+ Y VP K+ YL +L+ E + S +VF + +L
Sbjct: 216 SFHVENLDDLAVPASLQTTYLLVPEHVKEAYLYQVLSSEEYKSKSAIVFVNRTISAEILR 275
Query: 235 LMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDI 294
ML L R + M Q +R +L +F+A +LI TDVASRGLDIP+V +V+NYDI
Sbjct: 276 RMLMQLEIRVTSLHSQMPQRERTNSLQRFRANAARVLIATDVASRGLDIPAVQLVVNYDI 335
Query: 295 PTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL-- 352
P N YIHR GRTARAGR G A+S + ++ IE+ IGKK+ EF + L+
Sbjct: 336 PANPDTYIHRAGRTARAGRGGEALSFIAPKDVSRIQAIEERIGKKMDEFTKVGDTALIRK 395
Query: 353 LLERVTEAKRISQMTIKDSGNKRRRK 378
L +VT AKR S M + G RRK
Sbjct: 396 SLNKVTVAKRESLMAMDKEGFGERRK 421
>gi|190405946|gb|EDV09213.1| dead box protein [Saccharomyces cerevisiae RM11-1a]
Length = 431
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 162/393 (41%), Positives = 234/393 (59%), Gaps = 23/393 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT AFA P+L E F VL+PTRELA+QI+EQF A
Sbjct: 39 GRDCIGGAKTGSGKTIAFAGPMLTKWSEDPS------GMFGVVLTPTRELAMQIAEQFTA 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYL 125
LGS +++R +V+VGG ++QQ L L ++PH ++ATPGRL H+ ++ ++G L KYL
Sbjct: 93 LGSSMNIRVSVIVGGESIVQQALDLQRKPHFIIATPGRLAHHIMSSGDDTVGGLMRAKYL 152
Query: 126 VLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACL---KNPV-- 178
VLDEAD LL F L ++ +P RQT LF+AT+T +VK LQ A + K P+
Sbjct: 153 VLDEADILLTSTFADHLATCISALPPKDKRQTLLFTATITDQVKSLQNAPVQKGKPPLFA 212
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLAL 235
++E+ + TLK +Y VP K+ YL +LT E + ++F +L
Sbjct: 213 YQVESVDNVAIPSTLKIEYILVPEHVKEAYLYQLLTCEEYENKTAIIFVNRTMTAEILRR 272
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
L+ L R + M Q +R +L++F+A LI TDVASRGLDIP+V++V+NYDIP
Sbjct: 273 TLKQLEVRVASLHSQMPQQERTNSLHRFRANAARTLIATDVASRGLDIPTVELVVNYDIP 332
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--L 353
++ +IHR GRTARAGR G AIS V Q ++ IE I KK+ E + ++
Sbjct: 333 SDPDVFIHRSGRTARAGRIGDAISFVTQRDVSRIQAIEDRINKKMTETNKVHDTAVIRKA 392
Query: 354 LERVTEAKRISQMTIK--DSGNKRRRKGGDEDD 384
L +VT+AKR S M ++ + G ++R++ ++D
Sbjct: 393 LTKVTKAKRESLMAMQKENFGERKRQQKKKQND 425
>gi|365760297|gb|EHN02027.1| Dbp8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 437
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 162/385 (42%), Positives = 231/385 (60%), Gaps = 22/385 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT AFA P+L E F VL+PTRELA+QI+EQF A
Sbjct: 45 GRDCIGGAKTGSGKTIAFAGPMLTKWSE------DPCGMFGVVLTPTRELAMQIAEQFTA 98
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYL 125
LGS +++R +V+VGG ++QQ LAL ++PH ++ATPGRL H+ ++ ++G L KYL
Sbjct: 99 LGSSMNIRVSVVVGGESIIQQALALQRKPHFIIATPGRLAHHIMSSGEDTVGGLMRAKYL 158
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRM--RQTYLFSATMTKKVKKLQRACL---KNPV-- 178
VLDEAD LL F L + +P RQT LF+AT+T +V+ LQ A + K P+
Sbjct: 159 VLDEADILLTSTFADHLATCIGALPAKDKRQTLLFTATITDQVRSLQDAPVQEGKPPLFA 218
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLAL 235
++E+ + TLK +Y VP K+ YL +LT E + ++F +L
Sbjct: 219 YQVESVDNVAIPSTLKTEYILVPEHVKEAYLYQLLTCEEYENKTAIIFVNRTMTAEILRR 278
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
L+ L R + M Q +R +L++F+A +LI TDVASRGLDIP+V++V+NYDIP
Sbjct: 279 TLKQLEVRVASLHSQMPQQERTNSLHRFRANAARVLIATDVASRGLDIPTVELVVNYDIP 338
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--L 353
++ +IHR GRTARAGR G AIS V Q ++ IE I KK+ E + ++
Sbjct: 339 SDPDVFIHRSGRTARAGRNGDAISFVTQRDVSRIQAIEDRINKKMTETNKVHDTAVIRKA 398
Query: 354 LERVTEAKRISQMTI-KDSGNKRRR 377
L +VT+AKR S M + K++ +R+R
Sbjct: 399 LTKVTKAKRESLMAMQKENFGERKR 423
>gi|340502092|gb|EGR28809.1| hypothetical protein IMG5_168450 [Ichthyophthirius multifiliis]
Length = 409
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/372 (40%), Positives = 227/372 (61%), Gaps = 13/372 (3%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
K+++ A+TGSGKT AF+ PILQ L +E+ R + FA VL+ RELA+QISEQ
Sbjct: 42 KNVVINAETGSGKTAAFSFPILQFL---SEDPRGI---FAIVLTANRELALQISEQLSIF 95
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLVL 127
GS ++LR + LVGG+D +Q L PHI+V TPGR D L + F + L++LVL
Sbjct: 96 GSSLNLRVSTLVGGIDFAKQASELELIPHIIVGTPGRTADMLRKSDIFREYVENLEFLVL 155
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKK---VKKLQRA-CLKNPVKIEAA 183
DEADRL + + EI+ IP +Q L +AT+ ++ KKLQ+ C+K+ ++ +
Sbjct: 156 DEADRLFEEKVFTDIQEIIGQIPEKKQVILATATINEQDFCPKKLQKILCIKDNIEFFST 215
Query: 184 SKYS-TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQ 242
+K V T+ Q+Y +P KD +L+ IL + + ++FT C L +L+NL
Sbjct: 216 NKQKKMVQTVVQKYGLIPELVKDEFLINILEKYKETQIIIFTNKCQTCNFLHFLLKNLNF 275
Query: 243 RAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYI 302
+ + + QS+R+ L F+ NIL+ TDVASRGLDIP+V +VINYD+P N +DYI
Sbjct: 276 SNVNLHSKLKQSQRIAHLKTFRNQTVNILVSTDVASRGLDIPAVQLVINYDMPRNYEDYI 335
Query: 303 HRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
HRVGRTAR G+ GV+IS+ Q+++E IE IG+++ E + E + L +V +AK+
Sbjct: 336 HRVGRTARKGKRGVSISICTQFDVELLKNIEANIGEEMKEIQIDNEIINGLQVKVGKAKK 395
Query: 363 ISQMTIKDSGNK 374
I ++ + + +K
Sbjct: 396 IVKIQLSEKESK 407
>gi|160888927|ref|ZP_02069930.1| hypothetical protein BACUNI_01347 [Bacteroides uniformis ATCC 8492]
gi|270293944|ref|ZP_06200146.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. D20]
gi|423306019|ref|ZP_17284018.1| hypothetical protein HMPREF1072_02958 [Bacteroides uniformis
CL03T00C23]
gi|423309437|ref|ZP_17287427.1| hypothetical protein HMPREF1073_02177 [Bacteroides uniformis
CL03T12C37]
gi|156861394|gb|EDO54825.1| DEAD/DEAH box helicase [Bacteroides uniformis ATCC 8492]
gi|270275411|gb|EFA21271.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. D20]
gi|392679863|gb|EIY73240.1| hypothetical protein HMPREF1072_02958 [Bacteroides uniformis
CL03T00C23]
gi|392684477|gb|EIY77802.1| hypothetical protein HMPREF1073_02177 [Bacteroides uniformis
CL03T12C37]
Length = 425
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/333 (45%), Positives = 204/333 (61%), Gaps = 5/333 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDL+G AQTG+GKT AF++PILQ L + +N++++ A +L+PTRELAIQI E F A
Sbjct: 38 GKDLLGCAQTGTGKTAAFSIPILQKLYK-TDNRKSIKAL---ILTPTRELAIQIGESFSA 93
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G LR AV+ GGV QT L + I+VATPGRL D L N +L L++ VLD
Sbjct: 94 YGKYTGLRHAVIFGGVGQKPQTDELKRGVQILVATPGRLQD-LVNQGFINLKALEFFVLD 152
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F + IL ++P RQT FSATM +++ L + L +P K+E ST
Sbjct: 153 EADRMLDMGFIHDIRRILKLLPAKRQTLFFSATMPPEIETLANSMLTHPEKVEVTPASST 212
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDT+ Q FV K K L+++L + S ++FTRT LA L G RA I
Sbjct: 213 VDTISQSVYFVEKKEKKDLLIHLLKNPAIKSVLIFTRTKYGADKLARTLSKSGIRAEAIH 272
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ+ R AL FK E +LI TD+A+RG+D+ + VINY++P + Y+HR+GRT
Sbjct: 273 GNKSQNARQRALTGFKNHELRVLIATDIAARGIDVDQLSHVINYELPNIPETYVHRIGRT 332
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
RAG G+A+S EL + I+KLIGK +P
Sbjct: 333 GRAGHDGIALSFCESEELPYLKDIQKLIGKSIP 365
>gi|363752960|ref|XP_003646696.1| hypothetical protein Ecym_5095 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890332|gb|AET39879.1| hypothetical protein Ecym_5095 [Eremothecium cymbalariae
DBVPG#7215]
Length = 438
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 169/393 (43%), Positives = 233/393 (59%), Gaps = 28/393 (7%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPA-FFACVLSPTRELAIQISEQFE 67
G D IG A+TGSGKT AFA P+L N P+ F VL+PTRELA+QI+EQF
Sbjct: 40 GCDCIGGAKTGSGKTIAFAAPMLS-------NWSADPSGMFGVVLTPTRELAMQIAEQFT 92
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KY 124
ALGS ++++ A++VGG D+++Q L L +RPH ++ATPGRL H+ ++ ++G L KY
Sbjct: 93 ALGSIMNIKVALVVGGDDIVKQALELQRRPHFIIATPGRLAHHIMHSGEDTIGGLRRVKY 152
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACL---KNPV- 178
LVLDEAD LL + F K L L+V+P RQ LF+AT+T +VK L+ A K PV
Sbjct: 153 LVLDEADILLTNTFGKDLATCLSVLPPKEKRQNLLFTATITDQVKALKEAPRVEGKPPVF 212
Query: 179 --KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLA 234
++E + LK +Y VP K+ YL IL+ E + + +VF + +L
Sbjct: 213 SFQVEDLDCLAIPKALKTEYLLVPEHVKEAYLYQILSSEEYNDKTVIVFVNRTVSAEILR 272
Query: 235 LMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDI 294
LR L R + + Q +R +L +F+A ILI TDVASRGLDIP+V +V+NYDI
Sbjct: 273 RTLRLLDVRVTSLHSQLPQKERTNSLQRFRANAARILIATDVASRGLDIPAVQLVLNYDI 332
Query: 295 PTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL-- 352
P N YIHRVGRTARAGR+G ++S V+ ++ IE I KK+ EF + ++
Sbjct: 333 PANPDTYIHRVGRTARAGRSGESLSFVSPKDVSRIKAIESRINKKMDEFTKVGDTAVIRK 392
Query: 353 LLERVTEAKRISQMTIKDSG-----NKRRRKGG 380
L +VT AKR S M + G ++R KGG
Sbjct: 393 ALTKVTVAKRESLMAMDKEGFGEKRKQQRNKGG 425
>gi|375357970|ref|YP_005110742.1| putative ATP-dependent RNA helicase [Bacteroides fragilis 638R]
gi|301162651|emb|CBW22198.1| putative ATP-dependent RNA helicase [Bacteroides fragilis 638R]
Length = 427
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/334 (45%), Positives = 203/334 (60%), Gaps = 7/334 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDL+G AQTG+GKT AF++PILQ L + + A VL+PTRELAIQI E FEA
Sbjct: 38 GKDLLGCAQTGTGKTAAFSIPILQKLYKTDHRK----GIKALVLTPTRELAIQIGESFEA 93
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVL 127
G L+ AV+ GGV QT AL I+VATPGRL+D ++ +GF SL +L + VL
Sbjct: 94 YGRYTGLKHAVIFGGVGQKPQTDALRSGIQILVATPGRLLDLIS--QGFISLSSLDFFVL 151
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L+ F + IL ++P RQT FSATM +++ L + L P K+E S
Sbjct: 152 DEADRMLDMGFIHDIKRILKLLPARRQTLFFSATMPPEIETLANSMLTKPEKVEVTPASS 211
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVD + QQ FV K K L+++L + S S ++FTRT LA +L G A I
Sbjct: 212 TVDIISQQVYFVEKKEKKDLLIHLLKDTSIESVLIFTRTKYGADKLARVLTKAGIGAEAI 271
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G+ +Q+ R AL FK LI TD+A+RG+D+ + VINY++P + Y+HR+GR
Sbjct: 272 HGNKTQNARQRALTNFKNHTLRALIATDIAARGIDVDQLSHVINYELPNVPETYVHRIGR 331
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
T RAG GVAIS EL + I+KLIGKK+P
Sbjct: 332 TGRAGHEGVAISFCESEELPYLKDIQKLIGKKIP 365
>gi|319902651|ref|YP_004162379.1| DEAD/DEAH box helicase domain protein [Bacteroides helcogenes P
36-108]
gi|319417682|gb|ADV44793.1| DEAD/DEAH box helicase domain protein [Bacteroides helcogenes P
36-108]
Length = 422
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/333 (44%), Positives = 202/333 (60%), Gaps = 5/333 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDL+G AQTG+GKT AF++PILQ L + +N++ + A +L+PTRELAIQI E FEA
Sbjct: 38 GKDLLGCAQTGTGKTAAFSIPILQKLYK-TDNRKGIKAL---ILTPTRELAIQIGESFEA 93
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G L+ V+ GGV QT L + I++ATPGRL D L N +L TL + VLD
Sbjct: 94 YGKYTGLKHTVIFGGVGQKPQTDDLKRGTQILIATPGRLQD-LVNQGFINLKTLDFFVLD 152
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F + IL ++P RQT FSATM +++ L + L NP K+E ST
Sbjct: 153 EADRMLDMGFIHDIRRILKMLPTQRQTLFFSATMPSEIETLANSMLSNPAKVEVTPVSST 212
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDT+ Q FV K K L+++L + S +VFTRT LA +L G A I
Sbjct: 213 VDTISQSVYFVEKKEKKDLLIHLLKNTAIESVLVFTRTKYGADKLARILSKSGISAEAIH 272
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ+ R AL FK+ +LI TD+A+RG+D+ + VINY++P + Y+HR+GRT
Sbjct: 273 GNKSQNARQRALTGFKSHTIRVLIATDIAARGIDVEQLSHVINYELPNVPETYVHRIGRT 332
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
RAG G A+S EL + I+KLIGK +P
Sbjct: 333 GRAGHEGTALSFCESEELPYLKDIQKLIGKTIP 365
>gi|160897598|ref|YP_001563180.1| DEAD/DEAH box helicase [Delftia acidovorans SPH-1]
gi|160363182|gb|ABX34795.1| DEAD/DEAH box helicase domain protein [Delftia acidovorans SPH-1]
Length = 504
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 164/403 (40%), Positives = 231/403 (57%), Gaps = 16/403 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
GKD++G AQTG+GKT AF+LP+LQ L+ EN PA A VL PTRELA Q+++Q
Sbjct: 40 GKDVMGAAQTGTGKTAAFSLPLLQRLMR-HENTSASPARHPVRALVLLPTRELADQVAQQ 98
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
LR V+ GG+DM QTL L K ++VATPGRL+DH+ K L ++Y+
Sbjct: 99 IAQYAKYTKLRSTVVFGGMDMKPQTLELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYV 157
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L++PV IE A
Sbjct: 158 VLDEADRMLDIGFLPDLQRILSHLPKTRTTLLFSATFSPEIKRLASSYLQDPVTIEVARP 217
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
T T++Q++ V K L +L + VF+ + L L G RA
Sbjct: 218 NETASTVEQRFYSVSDDDKRYALRSLLKQRDIRQAFVFSNSKLGCARLTRALERDGLRAT 277
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL FK GE ++L+CTDVA+RGLDI V V NYD+P N++DY+HR+
Sbjct: 278 ALHGDKSQDERLKALEAFKRGEVDLLVCTDVAARGLDIKDVPAVFNYDVPFNAEDYVHRI 337
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
GRT RAG +G+A++LV ++ +IEKLI KK+ P E+ R R +
Sbjct: 338 GRTGRAGASGIAVTLVTNHDARLVGEIEKLIKKKINVEPCPMEDFRGSAPR---GHRFDE 394
Query: 366 MTIKDSG--NKRRRKG---GDEDDDIGR---QFGINKKKLSKR 400
+ + SG + R +G GD D R FG ++++R
Sbjct: 395 LPRQSSGGYGRERDRGAERGDRGGDASRGSSGFGHRGSRMTQR 437
>gi|407924387|gb|EKG17439.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 412
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 163/359 (45%), Positives = 225/359 (62%), Gaps = 27/359 (7%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA+PILQ E A FA +L+PTRELA+QI EQF A
Sbjct: 20 GRDCIGGSRTGSGKTVAFAVPILQKWSEDPV------AIFAVILTPTRELALQIYEQFNA 73
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKY 124
+G +L+ ++ GG DM Q +AL RPH+V+ATPGRL DH+ N+ G L +++
Sbjct: 74 IGGPQNLKTILVTGGTDMRSQAIALASRPHVVIATPGRLADHI-NSSGEDTICGLRRVRF 132
Query: 125 LVLDEADRLLNDDFEKSLDEI---LNVIP--RMRQTYLFSATMTKKVKKLQRACLKNPVK 179
+VLDEADRLL L ++ L+V+P RQT LF+AT+T +V+ L + + P K
Sbjct: 133 VVLDEADRLLASGRGSMLPDVETCLSVLPPSSRRQTCLFTATVTPEVRAL-KDMPRTPGK 191
Query: 180 IEA-ASKYSTVD-----TLKQQYRFVPAKYKDCYL-VYILTEVSAS-STMVFTRTCDATR 231
E + T D TL+Q+Y VP +++ +L +LT +AS ST++F +
Sbjct: 192 PEVFVCEVDTEDLAVPTTLQQKYLQVPVTHREAFLHTLLLTPANASKSTIIFVNRTSTAQ 251
Query: 232 LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVIN 291
LL MLR L R + + QS+R+ L +F+A IL+ TDVA+RGLDIP+V+MVIN
Sbjct: 252 LLEQMLRLLDHRVSSLHSGLPQSQRISNLARFRAKAARILVATDVAARGLDIPAVEMVIN 311
Query: 292 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEV 350
YD+P + DYIHRVGRTARAGR G +I++V Q ++E L IE +G K+ EF EEE V
Sbjct: 312 YDVPRDPDDYIHRVGRTARAGRAGESITMVGQRDVELVLAIENRVGTKMIEF--EEEGV 368
>gi|365983068|ref|XP_003668367.1| hypothetical protein NDAI_0B00900 [Naumovozyma dairenensis CBS 421]
gi|343767134|emb|CCD23124.1| hypothetical protein NDAI_0B00900 [Naumovozyma dairenensis CBS 421]
Length = 436
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 158/385 (41%), Positives = 231/385 (60%), Gaps = 22/385 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT AFA P+L E F VL+PTRELA+QI+EQF A
Sbjct: 44 GRDCIGGAKTGSGKTIAFAGPMLTKWSE------DPCGMFGVVLTPTRELAMQIAEQFTA 97
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YL 125
LGS +++R A++VGG +++Q + L +PH ++ATPGRL H+ N+ ++G LK +L
Sbjct: 98 LGSSMNIRVAIVVGGQSIVEQAIQLQNKPHFIIATPGRLAHHIMNSGEDTVGGLKRTKFL 157
Query: 126 VLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACLKN------P 177
VLDEAD LL D F L + +P RQT LF+AT+T +V+ L+ A ++
Sbjct: 158 VLDEADSLLTDSFAGDLATCIGALPPKHKRQTLLFTATITDQVRTLENAPAQDGKPSVFT 217
Query: 178 VKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLAL 235
++E+ K + TLK +Y VP K+ YL +LT SS ++F +L
Sbjct: 218 YQVESVDKVAIPSTLKTEYILVPEHVKEAYLYQLLTCETYKDSSAIIFVNRAMTAEVLRR 277
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
L +L R + +M Q +R +L++F+A +L+ TDVA+RGLDIP V++VINYDIP
Sbjct: 278 TLYHLDVRVASLHSYMPQQERTNSLHRFRANAARVLVATDVAARGLDIPIVELVINYDIP 337
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--L 353
++ +IHR GRTARAGR+G AIS V Q ++ IE+ I KK+ E + ++
Sbjct: 338 SDPDTFIHRAGRTARAGRSGDAISFVTQRDVSRIEAIEERINKKMDESDKVHDTAVIRKA 397
Query: 354 LERVTEAKRISQMTI-KDSGNKRRR 377
L +VT+AKR S M + K++ +R+R
Sbjct: 398 LTKVTKAKRESLMAMEKENFGERQR 422
>gi|327351047|gb|EGE79904.1| ATP-dependent RNA helicase DBP8 [Ajellomyces dermatitidis ATCC
18188]
Length = 553
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 170/408 (41%), Positives = 247/408 (60%), Gaps = 33/408 (8%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA PILQ + AE+ V FA +L+PTRELA+QI EQ +A
Sbjct: 158 GRDCIGGSRTGSGKTVAFAAPILQ---KWAEDPFGV---FAVILTPTRELALQIFEQIKA 211
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS---LGTLKYL 125
+ + SL+ ++ GG +M Q +AL +RPHIV+ATPGRL DH+T++ + L + +
Sbjct: 212 ISAPQSLKPILITGGTEMRPQAIALSQRPHIVIATPGRLADHITSSGADTICGLNRTRVV 271
Query: 126 VLDEADRLLNDDFEKSLDEI---LNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKNP 177
VLDEADRLL L ++ L+ +P RQT LF+AT+T +V+ L+ R K P
Sbjct: 272 VLDEADRLLASGPGSMLPDVETCLSALPPSTSRQTLLFTATVTPEVRALKSMPRPANKPP 331
Query: 178 V---KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL-TEVSAS-STMVFTRTCDATRL 232
+ +I ++ + TLKQ Y VP +++ +L +L TE +A +++F L
Sbjct: 332 IFVTEISTENQATIPPTLKQTYLQVPLTHREAFLHTLLSTEANAPKPSIIFCNRTKTADL 391
Query: 233 LALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINY 292
L MLR LG R + + QS+R L++F+A IL+ TDVA+RGLDIPSV +VIN+
Sbjct: 392 LERMLRRLGHRVTSLHSLLPQSERTANLSRFRASAARILVATDVAARGLDIPSVSLVINF 451
Query: 293 DIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL 352
D+P N DY+HRVGRTARAGR G A++LV Q +++ L IE +GKK+ E+ +EE V +
Sbjct: 452 DVPRNPDDYVHRVGRTARAGREGEAVTLVGQRDVQLVLAIEDRVGKKMIEW--KEEGVSI 509
Query: 353 LLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQ-FGINKKKLSK 399
E + + IK+ G +R G+ ++ GR G +KL K
Sbjct: 510 ------EGRVVRGGIIKEVGEAKREAMGEVEE--GRDVLGRRVRKLKK 549
>gi|261201117|ref|XP_002626959.1| ATP-dependent RNA helicase DBP8 [Ajellomyces dermatitidis SLH14081]
gi|239594031|gb|EEQ76612.1| ATP-dependent RNA helicase DBP8 [Ajellomyces dermatitidis SLH14081]
gi|239607095|gb|EEQ84082.1| ATP-dependent RNA helicase DBP8 [Ajellomyces dermatitidis ER-3]
Length = 553
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 170/408 (41%), Positives = 248/408 (60%), Gaps = 33/408 (8%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA PILQ + AE+ V FA +L+PTRELA+QI EQ +A
Sbjct: 158 GRDCIGGSRTGSGKTVAFAAPILQ---KWAEDPFGV---FAVILTPTRELALQIFEQIKA 211
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYL 125
+ + SL+ ++ GG +M Q +AL +RPHIV+ATPGRL DH+T++ ++ L + +
Sbjct: 212 ISAPQSLKPILITGGTEMRPQAIALSQRPHIVIATPGRLADHITSSGADTICGLNRTRVV 271
Query: 126 VLDEADRLLNDDFEKSLDEI---LNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKNP 177
VLDEADRLL L ++ L+ +P RQT LF+AT+T +V+ L+ R K P
Sbjct: 272 VLDEADRLLASGPGSMLPDVETCLSALPPSTSRQTLLFTATVTPEVRALKSMPRPANKPP 331
Query: 178 V---KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL-TEVSAS-STMVFTRTCDATRL 232
+ +I ++ + TLKQ Y VP +++ +L +L TE +A +++F L
Sbjct: 332 IFVTEISTENQATIPPTLKQTYLQVPLTHREAFLHTLLSTEANAPKPSIIFCNRTKTADL 391
Query: 233 LALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINY 292
L MLR LG R + + QS+R L++F+A IL+ TDVA+RGLDIPSV +VIN+
Sbjct: 392 LERMLRRLGHRVTSLHSLLPQSERTANLSRFRASAARILVATDVAARGLDIPSVSLVINF 451
Query: 293 DIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL 352
D+P N DY+HRVGRTARAGR G A++LV Q +++ L IE +GKK+ E+ +EE V +
Sbjct: 452 DVPRNPDDYVHRVGRTARAGREGEAVTLVGQRDVQLVLAIEDRVGKKMIEW--KEEGVSI 509
Query: 353 LLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQ-FGINKKKLSK 399
E + + IK+ G +R G+ ++ GR G +KL K
Sbjct: 510 ------EGRVVRGGIIKEVGEAKREAMGEVEE--GRDVLGRRVRKLKK 549
>gi|317479221|ref|ZP_07938356.1| DEAD/DEAH box helicase [Bacteroides sp. 4_1_36]
gi|316904509|gb|EFV26328.1| DEAD/DEAH box helicase [Bacteroides sp. 4_1_36]
Length = 425
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 150/333 (45%), Positives = 204/333 (61%), Gaps = 5/333 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDL+G AQTG+GKT AF++PILQ L + +N++++ A +L+PTRELAIQI E F A
Sbjct: 38 GKDLLGCAQTGTGKTAAFSIPILQKLYK-TDNRKSIKAL---ILTPTRELAIQIGECFSA 93
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G LR AV+ GGV QT L + I+VATPGRL D L N +L L++ VLD
Sbjct: 94 YGKYTGLRHAVIFGGVGQKPQTDELKRGVQILVATPGRLQD-LVNQGFINLKALEFFVLD 152
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F + IL ++P RQT FSATM +++ L + L +P K+E ST
Sbjct: 153 EADRMLDMGFIHDIRRILKLLPAKRQTLFFSATMPPEIETLANSMLTHPEKVEVTPASST 212
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDT+ Q FV K K L+++L + S ++FTRT LA L G RA I
Sbjct: 213 VDTISQSVYFVEKKEKKDLLIHLLKNPAIESVLIFTRTKYGADKLARTLSKSGIRAEAIH 272
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ+ R AL FK E +LI TD+A+RG+D+ + VINY++P + Y+HR+GRT
Sbjct: 273 GNKSQNARQRALTGFKNHELRVLIATDIAARGIDVDQLSHVINYELPNIPETYVHRIGRT 332
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
RAG G+A+S EL + I+KLIGK +P
Sbjct: 333 GRAGHDGIALSFCESEELPYLKDIQKLIGKSIP 365
>gi|291000284|ref|XP_002682709.1| dead box-containing ATP-dependent RNA helicase [Naegleria gruberi]
gi|284096337|gb|EFC49965.1| dead box-containing ATP-dependent RNA helicase [Naegleria gruberi]
Length = 955
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 158/385 (41%), Positives = 219/385 (56%), Gaps = 30/385 (7%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGK++IG++QTGSGKT AFALPI+Q L + + +A +++P RELAIQI + FE
Sbjct: 172 AGKNVIGMSQTGSGKTAAFALPIIQNLA------KDMYGIYALIITPARELAIQIKQHFE 225
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLT--NTKGFSLGTLKYL 125
L + +R A+LVGG+D ++Q L PHIVV TPGR+ D + N G+ +KYL
Sbjct: 226 ILAGDLPIRVALLVGGMDYLKQAHLLDSSPHIVVGTPGRIEDAIRTFNNDGY-FKKIKYL 284
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKI----- 180
V DEADR+ + D+ LD IL+V RQT L+SATM +VKKL + + N K
Sbjct: 285 VFDEADRIFSMDYSLDLDRILSVSNPKRQTLLYSATMNNQVKKLAKMAMSNSGKTKEERE 344
Query: 181 ------EAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASS-TMVFTRTCDATRLL 233
+A + D L Q Y F+P KD Y V ++ + +S ++VF L+
Sbjct: 345 QSLYIYDACKLFQLADNLSQYYLFMPEHVKDAYFVQLINSLPDNSISIVFFSDITQCELM 404
Query: 234 ALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYD 293
R LG + SQ +R L F+ L CTDVA+RGLDIP+V VINYD
Sbjct: 405 NQTCRLLGISCDSLHASKSQKERFAVLKYFRKRRLKFLFCTDVANRGLDIPAVGYVINYD 464
Query: 294 IPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFP------AEE 347
+P + Y+HRVGRTARAGR GV ISL++Q+E++ IE ++ ++ AE
Sbjct: 465 LPDTTDKYVHRVGRTARAGRLGVCISLISQFEVKRIKAIESDTDVQMAKYEPFDEEQAES 524
Query: 348 EEVLLLLERVTEAKRISQMTIKDSG 372
EE LL V E K +++T+ DSG
Sbjct: 525 EEHLL---SVAEQKCKAKITLLDSG 546
>gi|445499097|ref|ZP_21465952.1| ATP-dependent RNA helicase RhlE [Janthinobacterium sp. HH01]
gi|444789092|gb|ELX10640.1| ATP-dependent RNA helicase RhlE [Janthinobacterium sp. HH01]
Length = 550
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 146/331 (44%), Positives = 201/331 (60%), Gaps = 5/331 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT FALPI+Q LL A T PA A +L+PTRELA+Q++E
Sbjct: 102 GRDVMGAAQTGTGKTAGFALPIIQMLLAHASTS-TSPARHPVRALILTPTRELAVQVAEN 160
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+A LR V+ GG+DM QT+ L IV+ATPGRL+DH+ K SLG ++ L
Sbjct: 161 VKAYAQHTPLRSTVVFGGMDMKGQTVILKAGVEIVIATPGRLLDHVEQ-KNISLGQVQML 219
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
V+DEADR+L+ F L I+N++P RQ +FSAT + ++KKL L NPV IE A
Sbjct: 220 VMDEADRMLDMGFLPDLQRIINLLPAKRQNLMFSATFSPEIKKLANTFLTNPVTIEVARS 279
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
T D + Q VP K ++L + ++F+ T LA L G +A+
Sbjct: 280 NQTADKVTQVVYKVPENQKHALTAHLLRQRELKQVIIFSNTKIGASRLAKGLEQEGMKAV 339
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G +Q +R+ AL FK GE +IL+ TDVA+RGLDI + VINYD+P N++DY+HR+
Sbjct: 340 AIHGDKTQQERMAALESFKKGEIDILVATDVAARGLDITDLPCVINYDLPYNAEDYVHRI 399
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLI 336
GRT RAG +G A+S+ + + IEKLI
Sbjct: 400 GRTGRAGASGDALSIYSDKDERLLADIEKLI 430
>gi|319778451|ref|YP_004129364.1| ATP-dependent RNA helicase [Taylorella equigenitalis MCE9]
gi|397662231|ref|YP_006502931.1| putative ATP-dependent RNA helicase [Taylorella equigenitalis ATCC
35865]
gi|317108475|gb|ADU91221.1| ATP-dependent RNA helicase [Taylorella equigenitalis MCE9]
gi|394350410|gb|AFN36324.1| putative ATP-dependent RNA helicase [Taylorella equigenitalis ATCC
35865]
gi|399115832|emb|CCG18635.1| putative ATP-dependent RNA helicase [Taylorella equigenitalis
14/56]
Length = 442
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 211/335 (62%), Gaps = 5/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFAC---VLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF LPIL L+ A N T PA VL+PTRELA QIS+
Sbjct: 41 GRDIMGAAQTGTGKTAAFTLPILNRLIPKA-NYSTSPAKHPVRMLVLTPTRELAEQISKN 99
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
G+ L+C+++ GGVD+ Q L + IV+ATPGRL+DH+ + +L +++L
Sbjct: 100 VNLYSDGLPLKCSLIYGGVDINSQKQELMRGADIVIATPGRLLDHIEQ-RTVNLTQVEFL 158
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ RQ+ L+SAT ++ ++ L + L NPV+I AS
Sbjct: 159 VLDEADRMLDMGFMPDLLRILSNLPKSRQSLLYSATFSENIRSLAQKFLNNPVEITVASN 218
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
ST T+KQ+ V K+ LVYILT + ++ ++F+ + L +L N
Sbjct: 219 NSTASTIKQEVYSVSESDKNAALVYILTSRAFNNVIIFSNRKVTCKNLERLLNNYDLAVQ 278
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +R AL+ FK+ +CNIL+ TDVA+RGLDI VD VINY++P S+DY+HR+
Sbjct: 279 SLHGDKSQLERTKALDLFKSSKCNILVATDVAARGLDISDVDAVINYELPPTSEDYVHRI 338
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
GRT RAG+ G+AISL + E + +IE L G K
Sbjct: 339 GRTGRAGKKGIAISLCSSEEGKSLSEIETLTGLKF 373
>gi|156844185|ref|XP_001645156.1| hypothetical protein Kpol_1062p5 [Vanderwaltozyma polyspora DSM
70294]
gi|160380632|sp|A7TK63.1|DBP8_VANPO RecName: Full=ATP-dependent RNA helicase DBP8
gi|156115814|gb|EDO17298.1| hypothetical protein Kpol_1062p5 [Vanderwaltozyma polyspora DSM
70294]
Length = 431
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 162/385 (42%), Positives = 230/385 (59%), Gaps = 21/385 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT AFA P+L ++ F VL+PTRELAIQI+EQF A
Sbjct: 39 GRDCIGGAKTGSGKTIAFAGPML------SQWSDDPSGMFGVVLTPTRELAIQIAEQFTA 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYL 125
LGS +++R ++VGG +++Q L L K+PH ++ATPGRL H+ ++ +G L KYL
Sbjct: 93 LGSSMNIRVCLVVGGESIVKQALELQKKPHFIIATPGRLAHHILSSGEEVVGGLSRVKYL 152
Query: 126 VLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACL---KNPV-- 178
VLDEAD +L F L + +P + RQT LF+AT+T +V+ LQ A K P+
Sbjct: 153 VLDEADLILTQTFAADLSTCIAKLPPKQKRQTLLFTATITDQVRALQNAPAQDSKPPLFA 212
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLAL 235
++E + TLK +Y VP K+ YL +LT + SS +VF A +L
Sbjct: 213 YEVENVDNVAVPSTLKLEYLLVPEHVKEAYLYQLLTCEDYKDSSVIVFVNRTTAAEVLRR 272
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
LR+L R + M QS+R+ +L +F+A +LI TDVA+RGLDIP+V++VINYDIP
Sbjct: 273 TLRSLEVRVASLHSQMPQSERINSLQRFRANAARVLIATDVAARGLDIPTVELVINYDIP 332
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--L 353
+ +IHR GRTARAGR+G AIS V ++ IE+ I KK+ E + ++
Sbjct: 333 QDPDTFIHRSGRTARAGRSGDAISFVTPRDVSRIEAIEERINKKMDECKKVHDTAVIRKA 392
Query: 354 LERVTEAKRISQMTIKDSGNKRRRK 378
L +VT+AKR S M ++ + +RK
Sbjct: 393 LTKVTKAKRESLMDMEKANFGEKRK 417
>gi|121705654|ref|XP_001271090.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
gi|134034080|sp|A1CKJ0.1|DBP8_ASPCL RecName: Full=ATP-dependent RNA helicase dbp8
gi|119399236|gb|EAW09664.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
Length = 523
Score = 270 bits (691), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 168/409 (41%), Positives = 246/409 (60%), Gaps = 35/409 (8%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD IG ++TGSGKT AF++P+LQ + AE+ F +L+PTRELA+QI EQ +A
Sbjct: 130 GKDCIGGSRTGSGKTIAFSVPMLQ---KWAEDPL---GIFGLILTPTRELALQIFEQIKA 183
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YL 125
+ + S++ ++ GG DM Q LAL RPH+VVATPGRL DH+ ++ ++ LK +
Sbjct: 184 ISAPQSMKPVLITGGTDMRSQALALAGRPHVVVATPGRLADHIKSSGEDTVCGLKRVRMV 243
Query: 126 VLDEADRLLNDDFEKSLDEI---LNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKNP 177
VLDEADRLL+ L ++ L+ +P RQT LF+AT+T +V+ L+ RA K P
Sbjct: 244 VLDEADRLLSSGPGSMLPDVETCLSALPPSSERQTLLFTATVTPEVRALKNMPRAANKPP 303
Query: 178 V---KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATR--- 231
V +I + S+ + TLKQ Y VP +++ +L ++L +ST C+ T+
Sbjct: 304 VFVTEISSESQGTVPPTLKQTYLKVPLTHREAFL-HVLLSTEGNSTKPAIIFCNHTKTAD 362
Query: 232 LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVIN 291
LL MLR L R + + QS+R L +F+A IL+ TDVASRGLDIPSV +V+N
Sbjct: 363 LLERMLRRLSHRVTSLHSLLPQSERNANLARFRASAARILVATDVASRGLDIPSVSLVVN 422
Query: 292 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 351
YD+P N DY+HRVGRTARAGR+G +++LV Q +++ L IE +G+++ E+ EE V
Sbjct: 423 YDVPRNPDDYVHRVGRTARAGRSGESVTLVGQRDVQLVLAIEARVGRQMEEW--SEEGVS 480
Query: 352 LLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQ-FGINKKKLSK 399
+ E + + +K+ G +R G+ D+ GR G + KL K
Sbjct: 481 I------EGRVVRTGVLKEVGEAKREASGEIDE--GRDVLGRKRNKLKK 521
>gi|313146179|ref|ZP_07808372.1| ATP-dependent RNA helicase [Bacteroides fragilis 3_1_12]
gi|423279249|ref|ZP_17258162.1| hypothetical protein HMPREF1203_02379 [Bacteroides fragilis HMW
610]
gi|313134946|gb|EFR52306.1| ATP-dependent RNA helicase [Bacteroides fragilis 3_1_12]
gi|404585418|gb|EKA90034.1| hypothetical protein HMPREF1203_02379 [Bacteroides fragilis HMW
610]
Length = 427
Score = 270 bits (691), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 152/334 (45%), Positives = 202/334 (60%), Gaps = 7/334 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDL+G AQTG+GKT AF++PILQ L + + A VL+PTRELAIQI E FEA
Sbjct: 38 GKDLLGCAQTGTGKTAAFSIPILQKLYKTDHRK----GIKALVLTPTRELAIQIGESFEA 93
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVL 127
G L+ AV+ GGV QT AL I+VATPGRL+D ++ +GF SL +L + VL
Sbjct: 94 YGRYTGLKHAVIFGGVGQKPQTDALRGGIQILVATPGRLLDLIS--QGFVSLNSLDFFVL 151
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L+ F + IL ++P RQT FSATM +++ L + L P K+E S
Sbjct: 152 DEADRMLDMGFIHDIKRILKLLPTKRQTLFFSATMPPEIETLANSMLTKPEKVEVTPASS 211
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVD + QQ FV K K L+++L + S S ++FTRT LA +L G A I
Sbjct: 212 TVDIISQQVYFVEKKEKKDLLIHLLKDASIESVLIFTRTKYGADKLARILTKAGIGAEAI 271
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G+ +Q+ R AL FK LI TD+A+RG+D+ + VINY++P + Y+HR+GR
Sbjct: 272 HGNKTQNARQRALTNFKNHTLRALIATDIAARGIDVDQLSHVINYELPNVPETYVHRIGR 331
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
T RAG GVAIS EL + I+KLIGK +P
Sbjct: 332 TGRAGHEGVAISFCESEELPYLKDIQKLIGKNIP 365
>gi|157107875|ref|XP_001649978.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108868632|gb|EAT32857.1| AAEL014904-PA [Aedes aegypti]
Length = 526
Score = 270 bits (691), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 157/386 (40%), Positives = 229/386 (59%), Gaps = 26/386 (6%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT AFALPILQ L E + FA VL+PT ELA QI+EQF
Sbjct: 44 GQDCIGAAKTGSGKTFAFALPILQRLSEEPTSN------FALVLTPTHELAYQIAEQFSV 97
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G +S++ V+ GG D + + L RPHIVVA PGRL HLT +S +++LV+D
Sbjct: 98 AGQPMSVKVCVITGGTDQLLEAQRLQSRPHIVVAMPGRLASHLTGCNTYSFRAMQFLVVD 157
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEA-----A 183
EADR+L+ F++ L I + +P+ RQ FSAT+ K+ R P+ +A
Sbjct: 158 EADRVLSGSFDEDLAAIDSFLPKKRQNLFFSATL----KEFMRENSVFPIGADAFEWSEE 213
Query: 184 SKYSTVDTLKQQYRFVPAKYKDCYLVYILTEV----SASSTMVFTRTCDATRLLALMLRN 239
S+ +TV+TL Q+Y +D L+ L + +S M+FT + ++L++ L
Sbjct: 214 SEVATVETLDQRYILCADYDRDMVLIETLRKFKEDNEEASVMIFTNSKKDCQVLSMTLNT 273
Query: 240 LGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSK 299
+G + + G + Q +R+ ALN+FK+ +LI TDVASRGLDIP+V +V+N+ +P
Sbjct: 274 IGFDNVCLHGFLRQKERVAALNRFKSKHVRVLIATDVASRGLDIPNVQLVLNHRLPKIPN 333
Query: 300 DYIHRVGRTARAGRTGVAISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVT 358
+YIHRVGRTARAGR G+AIS+ +LE+ +IE LI KL E P ++ V + +V+
Sbjct: 334 EYIHRVGRTARAGRKGLAISIFRFPRDLEFLGEIESLINTKLTEHPIDQRLVERIFMQVS 393
Query: 359 EAKRISQMTIKDSG------NKRRRK 378
A+R ++M + + N RR+K
Sbjct: 394 VARREAEMNLDNKDFDERQHNYRRKK 419
>gi|423722013|ref|ZP_17696189.1| hypothetical protein HMPREF1078_00252 [Parabacteroides merdae
CL09T00C40]
gi|409242715|gb|EKN35475.1| hypothetical protein HMPREF1078_00252 [Parabacteroides merdae
CL09T00C40]
Length = 426
Score = 270 bits (691), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 161/392 (41%), Positives = 222/392 (56%), Gaps = 10/392 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G DL+G AQTG+GKT AF++PI+Q + E R P A +L+PTRELAIQI E F A
Sbjct: 45 GSDLLGCAQTGTGKTAAFSIPIIQKIEERISRGRK-PGIKALILTPTRELAIQIGESFTA 103
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G ++ V+ GGV QT AL + +++ATPGRL+D L N L TL+Y VLD
Sbjct: 104 YGRYTHVKHTVIFGGVGQKPQTDALERGVDVLIATPGRLLD-LINQGFIRLDTLEYFVLD 162
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F + IL ++PR RQ+ FSATM ++++L L P K+E ST
Sbjct: 163 EADRMLDMGFIHDIKRILPLLPRKRQSLFFSATMPPEIERLAGTILHEPEKVEVTPVSST 222
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDT+ Q FV K L +L + S S +VFTRT +A +L G A I
Sbjct: 223 VDTIDQSVYFVEKVEKINLLKNLLEDRSLESVLVFTRTKHGADKVARVLNKSGIGAEAIH 282
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ QS R AL+ FK +LI TD+ASRG+D+ + VINYD+P + Y+HR+GRT
Sbjct: 283 GNKGQSARQRALSSFKDHTLRVLIATDIASRGIDVDHLSHVINYDLPNVPETYVHRIGRT 342
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
RAGR+G+A S + E+ + I+KLIGK++P E + + E V E K+ I
Sbjct: 343 GRAGRSGIAFSFCDVEEVPYLKDIQKLIGKEVPVAGGHMFETVEVKEAVAEKKK----AI 398
Query: 369 KDSGNKRRRKGGDEDDDIGRQFGINKKKLSKR 400
K+ +R G D R NKK+ + +
Sbjct: 399 KEESKRRNMFGSKRDGSFWR----NKKRTAAK 426
>gi|53712950|ref|YP_098942.1| ATP-dependent RNA helicase DeaD [Bacteroides fragilis YCH46]
gi|60681162|ref|YP_211306.1| ATP-dependent RNA helicase [Bacteroides fragilis NCTC 9343]
gi|265763047|ref|ZP_06091615.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 2_1_16]
gi|383117799|ref|ZP_09938542.1| hypothetical protein BSHG_0049 [Bacteroides sp. 3_2_5]
gi|423249596|ref|ZP_17230612.1| hypothetical protein HMPREF1066_01622 [Bacteroides fragilis
CL03T00C08]
gi|423256091|ref|ZP_17237019.1| hypothetical protein HMPREF1067_03663 [Bacteroides fragilis
CL03T12C07]
gi|423258064|ref|ZP_17238987.1| hypothetical protein HMPREF1055_01264 [Bacteroides fragilis
CL07T00C01]
gi|423264968|ref|ZP_17243971.1| hypothetical protein HMPREF1056_01658 [Bacteroides fragilis
CL07T12C05]
gi|423268460|ref|ZP_17247432.1| hypothetical protein HMPREF1079_00514 [Bacteroides fragilis
CL05T00C42]
gi|423273980|ref|ZP_17252927.1| hypothetical protein HMPREF1080_01580 [Bacteroides fragilis
CL05T12C13]
gi|423285051|ref|ZP_17263934.1| hypothetical protein HMPREF1204_03472 [Bacteroides fragilis HMW
615]
gi|52215815|dbj|BAD48408.1| ATP-dependent RNA helicase DeaD [Bacteroides fragilis YCH46]
gi|60492596|emb|CAH07368.1| putative ATP-dependent RNA helicase [Bacteroides fragilis NCTC
9343]
gi|251946848|gb|EES87130.1| hypothetical protein BSHG_0049 [Bacteroides sp. 3_2_5]
gi|263255655|gb|EEZ27001.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 2_1_16]
gi|387777510|gb|EIK39607.1| hypothetical protein HMPREF1055_01264 [Bacteroides fragilis
CL07T00C01]
gi|392649282|gb|EIY42960.1| hypothetical protein HMPREF1067_03663 [Bacteroides fragilis
CL03T12C07]
gi|392655681|gb|EIY49323.1| hypothetical protein HMPREF1066_01622 [Bacteroides fragilis
CL03T00C08]
gi|392703744|gb|EIY96885.1| hypothetical protein HMPREF1079_00514 [Bacteroides fragilis
CL05T00C42]
gi|392704701|gb|EIY97836.1| hypothetical protein HMPREF1056_01658 [Bacteroides fragilis
CL07T12C05]
gi|392707413|gb|EIZ00532.1| hypothetical protein HMPREF1080_01580 [Bacteroides fragilis
CL05T12C13]
gi|404579640|gb|EKA84354.1| hypothetical protein HMPREF1204_03472 [Bacteroides fragilis HMW
615]
Length = 427
Score = 270 bits (691), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 152/334 (45%), Positives = 202/334 (60%), Gaps = 7/334 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDL+G AQTG+GKT AF++PILQ L + + A VL+PTRELAIQI E FEA
Sbjct: 38 GKDLLGCAQTGTGKTAAFSIPILQKLYKTDHRK----GIKALVLTPTRELAIQIGESFEA 93
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVL 127
G L+ AV+ GGV QT AL I+VATPGRL+D ++ +GF SL +L + VL
Sbjct: 94 YGRYTGLKHAVIFGGVGQKPQTDALRSGIQILVATPGRLLDLIS--QGFISLSSLDFFVL 151
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L+ F + IL ++P RQT FSATM +++ L + L P K+E S
Sbjct: 152 DEADRMLDMGFIHDIKRILKLLPARRQTLFFSATMPPEIETLANSMLTKPEKVEVTPASS 211
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVD + QQ FV K K L+++L + S S ++FTRT LA +L G A I
Sbjct: 212 TVDIISQQVYFVEKKEKKDLLIHLLKDTSIESVLIFTRTKYGADKLARVLTKAGIGAEAI 271
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G+ +Q+ R AL FK LI TD+A+RG+D+ + VINY++P + Y+HR+GR
Sbjct: 272 HGNKTQNARQRALTNFKNHTLRALIATDIAARGIDVDQLSHVINYELPNVPETYVHRIGR 331
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
T RAG GVAIS EL + I+KLIGK +P
Sbjct: 332 TGRAGHEGVAISFCESEELPYLKDIQKLIGKNIP 365
>gi|154492527|ref|ZP_02032153.1| hypothetical protein PARMER_02161 [Parabacteroides merdae ATCC
43184]
gi|154087752|gb|EDN86797.1| DEAD/DEAH box helicase [Parabacteroides merdae ATCC 43184]
Length = 419
Score = 270 bits (691), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 220/388 (56%), Gaps = 10/388 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G DL+G AQTG+GKT AF++PI+Q + E R P A +L+PTRELAIQI E F A
Sbjct: 38 GSDLLGCAQTGTGKTAAFSIPIIQKIEERISRGRK-PGIKALILTPTRELAIQIGESFTA 96
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G ++ V+ GGV QT AL + +++ATPGRL+D L N L TL+Y VLD
Sbjct: 97 YGRYTHVKHTVIFGGVGQKPQTDALERGVDVLIATPGRLLD-LINQGFIRLDTLEYFVLD 155
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F + IL ++PR RQ+ FSATM ++++L L P K+E ST
Sbjct: 156 EADRMLDMGFIHDIKRILPLLPRKRQSLFFSATMPPEIERLAGTILHEPEKVEVTPVSST 215
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDT+ Q FV K L +L + S S +VFTRT +A +L G A I
Sbjct: 216 VDTIDQSVYFVEKVEKINLLKNLLEDRSLESVLVFTRTKHGADKVARVLNKSGIGAEAIH 275
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ QS R AL+ FK +LI TD+ASRG+D+ + VINYD+P + Y+HR+GRT
Sbjct: 276 GNKGQSARQRALSSFKDHTLRVLIATDIASRGIDVDHLSHVINYDLPNVPETYVHRIGRT 335
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
RAGR+G+A S + E+ + I+KLIGK++P E + + E V E K+ I
Sbjct: 336 GRAGRSGIAFSFCDVEEVPYLKDIQKLIGKEVPVAGGHMFETVEVKEAVAEKKK----AI 391
Query: 369 KDSGNKRRRKGGDEDDDIGRQFGINKKK 396
K+ +R G D R NKK+
Sbjct: 392 KEESKRRNMFGSKRDGSFWR----NKKR 415
>gi|221065648|ref|ZP_03541753.1| DEAD/DEAH box helicase domain protein [Comamonas testosteroni KF-1]
gi|220710671|gb|EED66039.1| DEAD/DEAH box helicase domain protein [Comamonas testosteroni KF-1]
Length = 473
Score = 270 bits (690), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 151/340 (44%), Positives = 208/340 (61%), Gaps = 5/340 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
GKD++G AQTG+GKT AF+LP+LQ L+ EN PA A VL PTRELA Q+++Q
Sbjct: 40 GKDVMGAAQTGTGKTAAFSLPLLQRLMR-HENASASPARHPVRALVLLPTRELADQVAQQ 98
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
LR V+ GG+DM QTL L K ++VATPGRL+DH+ K L ++Y+
Sbjct: 99 IALYAKHTKLRSTVVFGGMDMKPQTLELKKGVEVLVATPGRLLDHI-EAKNVVLNQVEYV 157
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L++PV IE A
Sbjct: 158 VLDEADRMLDIGFLPDLQRILSYLPKSRTTLLFSATFSPEIKRLAGSYLQDPVTIEVARP 217
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
T T++Q++ V K + +L E +F+ + L L G RA
Sbjct: 218 NETASTVEQRFYKVSDDDKRYAIRSVLKERDIRQAFIFSNSKLGCARLTRALERDGLRAG 277
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL FKAGE ++L+CTDVA+RGLDI V V NYD+P N++DY+HR+
Sbjct: 278 ALHGDKSQDERLKALEAFKAGEVDLLVCTDVAARGLDIKDVPAVFNYDVPFNAEDYVHRI 337
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA 345
GRT RAG +G+A++LV ++ IEKLI KK+ PA
Sbjct: 338 GRTGRAGASGLAVTLVTDHDSRNVADIEKLIKKKIDVEPA 377
>gi|423345822|ref|ZP_17323511.1| hypothetical protein HMPREF1060_01183 [Parabacteroides merdae
CL03T12C32]
gi|409221557|gb|EKN14506.1| hypothetical protein HMPREF1060_01183 [Parabacteroides merdae
CL03T12C32]
Length = 426
Score = 270 bits (690), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 220/388 (56%), Gaps = 10/388 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G DL+G AQTG+GKT AF++PI+Q + E R P A +L+PTRELAIQI E F A
Sbjct: 45 GSDLLGCAQTGTGKTAAFSIPIIQKIEERISRGRK-PGIKALILTPTRELAIQIGESFTA 103
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G ++ V+ GGV QT AL + +++ATPGRL+D L N L TL+Y VLD
Sbjct: 104 YGRYTHVKHTVIFGGVGQKPQTDALERGVDVLIATPGRLLD-LINQGFIRLDTLEYFVLD 162
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F + IL ++PR RQ+ FSATM ++++L L P K+E ST
Sbjct: 163 EADRMLDMGFIHDIKRILPLLPRKRQSLFFSATMPPEIERLAGTILHEPEKVEVTPVSST 222
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDT+ Q FV K L +L + S S +VFTRT +A +L G A I
Sbjct: 223 VDTIDQSVYFVEKVEKINLLKNLLEDRSLESVLVFTRTKHGADKVARVLNKSGIGAEAIH 282
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ QS R AL+ FK +LI TD+ASRG+D+ + VINYD+P + Y+HR+GRT
Sbjct: 283 GNKGQSARQRALSSFKDHTLRVLIATDIASRGIDVDHLSHVINYDLPNVPETYVHRIGRT 342
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
RAGR+G+A S + E+ + I+KLIGK++P E + + E V E K+ I
Sbjct: 343 GRAGRSGIAFSFCDVEEVPYLKDIQKLIGKEVPVAGGHMFETVEVKEAVAEKKK----AI 398
Query: 369 KDSGNKRRRKGGDEDDDIGRQFGINKKK 396
K+ +R G D R NKK+
Sbjct: 399 KEESKRRNMFGSKRDGSFWR----NKKR 422
>gi|418528845|ref|ZP_13094787.1| hypothetical protein CTATCC11996_04137 [Comamonas testosteroni ATCC
11996]
gi|371454106|gb|EHN67116.1| hypothetical protein CTATCC11996_04137 [Comamonas testosteroni ATCC
11996]
Length = 473
Score = 270 bits (690), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 150/340 (44%), Positives = 208/340 (61%), Gaps = 5/340 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
GKD++G AQTG+GKT AF+LP+LQ L+ EN PA A VL PTRELA Q+++Q
Sbjct: 40 GKDVMGAAQTGTGKTAAFSLPLLQRLMR-HENASASPARHPVRALVLLPTRELADQVAQQ 98
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
LR V+ GG+DM QT+ L K ++VATPGRL+DH+ K L ++Y+
Sbjct: 99 IALYAKHTKLRSTVVFGGMDMKPQTIELKKGVEVLVATPGRLLDHI-EAKNVVLNQVEYV 157
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L++PV IE A
Sbjct: 158 VLDEADRMLDIGFLPDLQRILSYLPKSRTTLLFSATFSPEIKRLAGSYLQDPVTIEVARP 217
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
T T++Q++ V K + +L E +F+ + L L G RA
Sbjct: 218 NETASTVEQRFYKVTDDDKRYAIRSVLKERDIRQAFIFSNSKLGCARLTRALERDGLRAA 277
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL FKAGE ++L+CTDVA+RGLDI V V NYD+P N++DY+HR+
Sbjct: 278 ALHGDKSQDERLKALEAFKAGEVDLLVCTDVAARGLDIKDVPAVFNYDVPFNAEDYVHRI 337
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA 345
GRT RAG +G+A++LV ++ IEKLI KK+ PA
Sbjct: 338 GRTGRAGASGLAVTLVTDHDSRNVADIEKLIKKKIDVEPA 377
>gi|332529740|ref|ZP_08405694.1| DEAD/DEAH box helicase-like protein [Hylemonella gracilis ATCC
19624]
gi|332040761|gb|EGI77133.1| DEAD/DEAH box helicase-like protein [Hylemonella gracilis ATCC
19624]
Length = 506
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 151/335 (45%), Positives = 209/335 (62%), Gaps = 5/335 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT AF+LP+LQ LL+ EN T PA A VL PTRELA Q+++
Sbjct: 54 AGQDVMGAAQTGTGKTAAFSLPLLQRLLK-HENASTSPARHPVRALVLLPTRELADQVAQ 112
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
Q + LR AV+ GG+DM QTL L K ++VATPGRL+DH+ K L ++Y
Sbjct: 113 QVKMYAKYTHLRSAVVFGGMDMKPQTLELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEY 171
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
+VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L+NP+ IE A
Sbjct: 172 VVLDEADRMLDIGFLPDLQRILSHLPKQRTTLLFSATFSPEIKRLASSYLQNPITIEVAR 231
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
+T T++Q + V K L +L + + VF + LA L G +
Sbjct: 232 SNATATTVEQHFYSVGEDDKRHALRQVLRDKNLKQAFVFVNSKLGCARLARALERDGLKT 291
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
+ G SQ +RL AL+ FK GE ++L+CTDVA+RGLDI V V N DIP N++DY+HR
Sbjct: 292 AALHGDKSQDERLKALDAFKKGEVDLLVCTDVAARGLDIKDVPAVFNIDIPFNAEDYVHR 351
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKK 339
+GRT RAG GVA+S V+ +++ +IEKLI K
Sbjct: 352 IGRTGRAGALGVAVSFVSPRDVKSVAEIEKLIKTK 386
>gi|424662680|ref|ZP_18099717.1| hypothetical protein HMPREF1205_03066 [Bacteroides fragilis HMW
616]
gi|404576370|gb|EKA81108.1| hypothetical protein HMPREF1205_03066 [Bacteroides fragilis HMW
616]
Length = 427
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 152/334 (45%), Positives = 202/334 (60%), Gaps = 7/334 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDL+G AQTG+GKT AF++PILQ L + + A VL+PTRELAIQI E FEA
Sbjct: 38 GKDLLGCAQTGTGKTAAFSIPILQKLYKTDHRK----GIKALVLTPTRELAIQIGESFEA 93
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVL 127
G L+ AV+ GGV QT AL I+VATPGRL+D ++ +GF SL +L + VL
Sbjct: 94 YGRYTGLKHAVIFGGVGQKPQTDALRGGIQILVATPGRLLDLIS--QGFVSLNSLDFFVL 151
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L+ F + IL ++P RQT FSATM +++ L + L P K+E S
Sbjct: 152 DEADRMLDMGFIHDIKRILKLLPTKRQTLFFSATMPPEIETLANSMLTKPEKVEVTPASS 211
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVD + QQ FV K K L+++L + S S ++FTRT LA +L G A I
Sbjct: 212 TVDIISQQVYFVEKKEKKDLLIHLLKDASIESVLIFTRTKYGADKLARILTKAGIGAEAI 271
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G+ +Q+ R AL FK LI TD+A+RG+D+ + VINY++P + Y+HR+GR
Sbjct: 272 HGNKTQNARQRALTNFKNHTLRALIATDIAARGIDVDQLSHVINYELPNVPETYVHRIGR 331
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
T RAG GVAIS EL + I+KLIGK +P
Sbjct: 332 TGRAGHEGVAISFCESEELPYLKDIQKLIGKNIP 365
>gi|163855229|ref|YP_001629527.1| ATP-dependent RNA helicase [Bordetella petrii DSM 12804]
gi|163258957|emb|CAP41256.1| putative ATP-dependent RNA helicase [Bordetella petrii]
Length = 476
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 150/337 (44%), Positives = 207/337 (61%), Gaps = 5/337 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFAC---VLSPTRELAIQISE 64
AG+D++G AQTG+GKT AF LPIL L+ +A N PA +L+PTRELA Q+ E
Sbjct: 53 AGRDVMGAAQTGTGKTAAFTLPILHRLMPLA-NTSASPARHPVRTLILTPTRELADQVYE 111
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
+ LR AV+ GGVD+ Q AL + I+VATPGRL+DH+ K +L +
Sbjct: 112 SVKRYSKHTPLRSAVVFGGVDIGPQKEALRRGCEILVATPGRLLDHVEQ-KTVNLSQVGI 170
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F LD I+ ++P RQ LFSAT + +++KL R L PV+IE A+
Sbjct: 171 LVLDEADRMLDMGFLPDLDRIVRLLPAQRQGLLFSATFSNEIRKLGRTYLNQPVEIEVAA 230
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
+ +T DT+ Q +P+ K +V+++ +VF+ T T LA L G RA
Sbjct: 231 RNATADTVSQIAYQMPSDAKRAAVVHLVKSRGLKQVIVFSNTKIGTARLARELERDGVRA 290
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQ+ R+ AL+ FKAGE +L+ TDVA+RGLD+ V VINYD+P N++DY+HR
Sbjct: 291 ESIHGDKSQADRMKALDAFKAGELEVLVATDVAARGLDVAGVPCVINYDLPHNAEDYVHR 350
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
+GRT RAG +G AI+L E + IEKL + +P
Sbjct: 351 IGRTGRAGASGEAIALFTADETRYLQDIEKLTKRPVP 387
>gi|333916134|ref|YP_004489866.1| DEAD/DEAH box helicase domain-containing protein [Delftia sp.
Cs1-4]
gi|333746334|gb|AEF91511.1| DEAD/DEAH box helicase domain protein [Delftia sp. Cs1-4]
Length = 504
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/335 (44%), Positives = 206/335 (61%), Gaps = 5/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
GKD++G AQTG+GKT AF+LP+LQ L+ EN PA A VL PTRELA Q+++Q
Sbjct: 40 GKDVMGAAQTGTGKTAAFSLPLLQRLMR-HENTSASPARHPVRALVLLPTRELADQVAQQ 98
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
LR V+ GG+DM QTL L K ++VATPGRL+DH+ K L ++Y+
Sbjct: 99 IAQYAKYTKLRSTVVFGGMDMKPQTLELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYV 157
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L++PV IE A
Sbjct: 158 VLDEADRMLDIGFLPDLQRILSHLPKTRTTLLFSATFSPEIKRLASSYLQDPVTIEVARP 217
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
T T++Q++ V K L +L + VF+ + L L G RA
Sbjct: 218 NETASTVEQRFYSVSDDDKRYALRSLLKQRDIRQAFVFSNSKLGCARLTRALERDGLRAT 277
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL FK GE ++L+CTDVA+RGLDI V V NYD+P N++DY+HR+
Sbjct: 278 ALHGDKSQDERLKALEAFKRGEVDLLVCTDVAARGLDIKDVPAVFNYDVPFNAEDYVHRI 337
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
GRT RAG +G+A++LV ++ +IEKLI KK+
Sbjct: 338 GRTGRAGASGIAVTLVTNHDARLVGEIEKLIKKKI 372
>gi|400602623|gb|EJP70225.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 545
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 173/395 (43%), Positives = 238/395 (60%), Gaps = 34/395 (8%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA+P+LQ E A F VL+PTRELA+QI EQF A
Sbjct: 151 GRDCIGGSRTGSGKTVAFAVPMLQKWAEDPS------AVFGVVLTPTRELALQIYEQFRA 204
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKY 124
+ + SL+ ++ GG DM Q +AL +RPHI++ATPGRL DH+ T G L +++
Sbjct: 205 VAAPQSLKVVLITGGADMRPQAIALKQRPHIIIATPGRLADHV-RTSGEDTVCGLRRVRF 263
Query: 125 LVLDEADRLLNDDFEKSL----DEILNVIP--RMRQTYLFSATMTKKVKKLQ---RACLK 175
+VLDEADRLL+ S+ +E L+V+P RQT LF+ATMT +V+ L+ R K
Sbjct: 264 IVLDEADRLLHAAGPGSMLPDVEECLSVLPPPTERQTLLFTATMTPEVRALEAMPRKPGK 323
Query: 176 NPVKI-EAASKYSTVD-TLKQQYRFVPAKYKDCYL-VYILTEVSASSTMVF--TRTCDAT 230
PV + E ++ V TL Q + VP +K+ YL V +LTE + T++ RT A
Sbjct: 324 QPVFVCEVDTQTLAVPATLSQYHLQVPVTHKEHYLHVLLLTEANVGKTVILFCNRTATAD 383
Query: 231 RLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVI 290
L MLR L R + + Q +R+ L +F+A ILI TDVA+RGLDIP V +VI
Sbjct: 384 -FLHHMLRLLDHRVTSLHSKLPQRQRIDNLARFRASAARILIATDVAARGLDIPEVSLVI 442
Query: 291 NYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAE---- 346
NYD+P + DYIHRVGRTARAGR G A++ V Q ++E L IEK +G+ + + E
Sbjct: 443 NYDVPRDPDDYIHRVGRTARAGRAGEAVTFVGQRDVELVLAIEKRVGRDMEAWAEEGVNL 502
Query: 347 EEEVLL-LLERVTEAKRISQMTI---KDSGNKRRR 377
E VL L+ V+E KR + + + K+ G KR+R
Sbjct: 503 ETRVLRDALKTVSEKKREALLEVEENKEVGGKRKR 537
>gi|226289015|gb|EEH44527.1| ATP-dependent RNA helicase DBP8 [Paracoccidioides brasiliensis
Pb18]
Length = 546
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 161/379 (42%), Positives = 228/379 (60%), Gaps = 34/379 (8%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA PILQ E FA VL+PTRELA+QI EQ +A
Sbjct: 153 GRDCIGGSRTGSGKTVAFAAPILQKWSEDPF------GIFAVVLTPTRELALQIFEQIKA 206
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKY 124
+ + SL+ ++ GG +M Q +AL +RPH+V+ATPGRL DH+ N+ G L ++
Sbjct: 207 ISAPQSLKPILITGGTEMRPQAIALSQRPHVVIATPGRLADHI-NSSGRDTICGLNRARF 265
Query: 125 LVLDEADRLLND---DFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKN 176
+VLDEADRLL L+ L+ +P RQT LF+AT+T +V+ L+ R K
Sbjct: 266 VVLDEADRLLESGPGSMLADLETCLSALPPSTARQTLLFTATVTPEVRALKSMPRPASKP 325
Query: 177 PV---KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASS--TMVFTRTCDATR 231
P+ +I ++ + TLKQ Y VP +++ +L +L+ SS ++F
Sbjct: 326 PIFVTEISTENQATIPRTLKQSYLLVPLTHREAFLHVLLSTDGNSSKAAIIFCNHTKTAD 385
Query: 232 LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVIN 291
LL MLR LG RA + + QS+R L++F+A IL+ TDVA+RGLDIPSV +VIN
Sbjct: 386 LLERMLRRLGHRATSLHSLLPQSERTANLSRFRASAARILVATDVAARGLDIPSVSLVIN 445
Query: 292 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 351
+ +P N DY+HRVGRTARAGR G A++LV Q +++ L IE +G+K+ E+ +EE V
Sbjct: 446 FGVPRNPDDYVHRVGRTARAGREGEAVTLVGQRDVQLVLAIEDRVGRKMEEW--KEEGVS 503
Query: 352 L--------LLERVTEAKR 362
+ +L+ V EAKR
Sbjct: 504 IEGRIVRGGILKEVGEAKR 522
>gi|225681783|gb|EEH20067.1| ATP-dependent RNA helicase dbp8 [Paracoccidioides brasiliensis
Pb03]
Length = 546
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 161/379 (42%), Positives = 228/379 (60%), Gaps = 34/379 (8%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA PILQ E FA VL+PTRELA+QI EQ +A
Sbjct: 153 GRDCIGGSRTGSGKTVAFAAPILQKWSEDPF------GIFAVVLTPTRELALQIFEQIKA 206
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKY 124
+ + SL+ ++ GG +M Q +AL +RPH+V+ATPGRL DH+ N+ G L ++
Sbjct: 207 ISAPQSLKPILITGGTEMRPQAIALSQRPHVVIATPGRLADHI-NSSGRDTICGLNRARF 265
Query: 125 LVLDEADRLLND---DFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKN 176
+VLDEADRLL L+ L+ +P RQT LF+AT+T +V+ L+ R K
Sbjct: 266 VVLDEADRLLESGPGSMLADLETCLSALPPSTARQTLLFTATVTPEVRALKSMPRPASKP 325
Query: 177 PV---KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASS--TMVFTRTCDATR 231
P+ +I ++ + TLKQ Y VP +++ +L +L+ SS ++F
Sbjct: 326 PIFVTEISTENQATIPRTLKQSYLLVPLTHREAFLHVLLSTDGNSSKAAIIFCNHTKTAD 385
Query: 232 LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVIN 291
LL MLR LG RA + + QS+R L++F+A IL+ TDVA+RGLDIPSV +VIN
Sbjct: 386 LLERMLRRLGHRATSLHSLLPQSERTANLSRFRASAARILVATDVAARGLDIPSVSLVIN 445
Query: 292 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 351
+ +P N DY+HRVGRTARAGR G A++LV Q +++ L IE +G+K+ E+ +EE V
Sbjct: 446 FGVPRNPDDYVHRVGRTARAGREGEAVTLVGQRDVQLVLAIEDRVGRKMEEW--KEEGVS 503
Query: 352 L--------LLERVTEAKR 362
+ +L+ V EAKR
Sbjct: 504 IEGRIVRGGILKEVGEAKR 522
>gi|329960847|ref|ZP_08299126.1| ATP-dependent RNA helicase RhlE [Bacteroides fluxus YIT 12057]
gi|328532133|gb|EGF58937.1| ATP-dependent RNA helicase RhlE [Bacteroides fluxus YIT 12057]
Length = 423
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 160/384 (41%), Positives = 223/384 (58%), Gaps = 14/384 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDL+G AQTG+GKT AF++PILQ L + +N++ + A +L+PTRELAIQI E FEA
Sbjct: 38 GKDLLGCAQTGTGKTAAFSIPILQKLYK-TDNRKGIKAL---ILTPTRELAIQIGESFEA 93
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G LR V+ GGV QT L + I+VATPGRL D L N +L L + VLD
Sbjct: 94 YGRYTGLRHTVIFGGVGQKPQTDELKRGVQILVATPGRLQD-LVNQGFINLKALDFFVLD 152
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F + IL +P RQT FSATM +++ L + L +P K+E ST
Sbjct: 153 EADRMLDMGFIHDIRRILKFLPAKRQTLFFSATMPPEIETLANSMLTDPEKVEVTPASST 212
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDT+ Q FV K K L+++L + S +S ++FTRT LA L G A I
Sbjct: 213 VDTISQSVYFVEKKEKKDLLIHLLKDPSIASVLIFTRTKHGADKLARTLSKSGIPAEAIH 272
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ+ R AL FK+ +LI TD+A+RG+D+ + VINY++P + Y+HR+GRT
Sbjct: 273 GNKSQNARQRALTGFKSHTLRVLIATDIAARGIDVDQLSHVINYELPNIPETYVHRIGRT 332
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP---EFPAEEEEVLLLLERVTEAKRISQ 365
RAG G+A+S EL + I+KLIGK +P + P + + E+ TE +
Sbjct: 333 GRAGHDGIALSFCESEELPYLKDIQKLIGKTIPIIKDHPFITTDGIQAQEKKTE-----E 387
Query: 366 MTIKDSGNKRRRKGGDEDDDIGRQ 389
+ +K NK+ R G + D R+
Sbjct: 388 IKVKAKENKKYR-GNRSNGDFWRR 410
>gi|78776809|ref|YP_393124.1| DEAD/DEAH box helicase [Sulfurimonas denitrificans DSM 1251]
gi|78497349|gb|ABB43889.1| DEAD/DEAH box helicase-like protein [Sulfurimonas denitrificans DSM
1251]
Length = 432
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 209/335 (62%), Gaps = 4/335 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
A D+ AQTG+GKT AF L +LQ L + +++++ A V++PTREL+IQI E +
Sbjct: 37 AKSDVFATAQTGTGKTAAFGLGMLQRLRKTSDDKQR--ALRGLVIAPTRELSIQIYEDLQ 94
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
+ + + AVLVGG D+ Q L + IV+ATPGR+++H+ KG SL ++ VL
Sbjct: 95 SYAKNMGINIAVLVGGKDLESQQKILKEGVDIVIATPGRVLEHVD--KGLSLSHVEIFVL 152
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L+ F K + I ++P+ QT LFSAT + KV+KL + L P IE + K S
Sbjct: 153 DEADRMLDMGFMKEIRRIHPILPKRHQTLLFSATFSDKVRKLSKLILTKPAFIETSKKNS 212
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDT+ Q V + K L YI+ + +VFTRT + LL + L+ G + I
Sbjct: 213 TVDTINQVAYLVDTEKKAPLLAYIIGSRNFRQVLVFTRTKASADLLVVELKKDGLKCGII 272
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +Q+ RL LN+FK G+ +L+ TD+ASRGLDI + VINY++P+ +DY+HRVGR
Sbjct: 273 HGDKTQANRLKTLNEFKEGKIKVLVATDIASRGLDIEELPFVINYELPSIPEDYVHRVGR 332
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPE 342
T RAGR G+AISL++ YE IEKLIG K+P+
Sbjct: 333 TGRAGRDGMAISLIDIYEKFDIKDIEKLIGMKIPQ 367
>gi|212527694|ref|XP_002144004.1| ATP dependent RNA helicase (Dbp8), putative [Talaromyces marneffei
ATCC 18224]
gi|210073402|gb|EEA27489.1| ATP dependent RNA helicase (Dbp8), putative [Talaromyces marneffei
ATCC 18224]
Length = 538
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 163/380 (42%), Positives = 235/380 (61%), Gaps = 36/380 (9%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD IG ++TGSGKT AFA+PILQ + AE+ V FA VL+PTRELA+QI EQF+A
Sbjct: 145 GKDCIGGSRTGSGKTIAFAVPILQ---KWAEDPFGV---FAVVLTPTRELALQIFEQFKA 198
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKY 124
+ + SL+ ++ GG DM Q +AL +RPH+++ATPGRL DH+ T G L ++
Sbjct: 199 ISAPQSLKPVLITGGTDMRPQAIALSQRPHVIIATPGRLADHI-RTSGEDTIVGLNRVRM 257
Query: 125 LVLDEADRLLNDDFEKSLDEI---LNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKN 176
+V+DEADRLL L ++ L+ +P RQT LF+AT+T +V+ L+ R +
Sbjct: 258 VVMDEADRLLTSGQGSMLPDVETCLSALPPSSERQTLLFTATVTPEVRALKSMPRPANRP 317
Query: 177 PV---KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATR-- 231
P+ +I + TLKQ Y VP +++ +L ++L +ST C+ TR
Sbjct: 318 PIHVTEIGTENHAPIPPTLKQTYLQVPMTHREAFL-HVLLSTERNSTKPAIIFCNRTRTA 376
Query: 232 -LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVI 290
LL +LR L R + + QS+R L++F+A +L+ TDVASRGLDIP+V +VI
Sbjct: 377 DLLERILRRLSHRVTSLHSLLPQSERTANLSRFRASAARLLVATDVASRGLDIPNVSLVI 436
Query: 291 NYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEV 350
N+D+P N DY+HRVGRTARAGRTG +++LV Q +++ L IEK +G+++ E+ EEE V
Sbjct: 437 NFDVPRNPDDYVHRVGRTARAGRTGESVTLVGQRDVQLVLAIEKRVGRQMIEW--EEEGV 494
Query: 351 LL--------LLERVTEAKR 362
+ +L+ V EAKR
Sbjct: 495 SVETRVVKGGILKEVGEAKR 514
>gi|357436713|ref|XP_003588632.1| ATP dependent RNA helicase [Medicago truncatula]
gi|355477680|gb|AES58883.1| ATP dependent RNA helicase [Medicago truncatula]
Length = 708
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/361 (42%), Positives = 214/361 (59%), Gaps = 31/361 (8%)
Query: 7 DAGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQF 66
D G D+ G++ G GKT +F LPI ALLE N + FFA VL TR LA ++ F
Sbjct: 362 DEGNDVFGVSPPGIGKTVSFVLPISHALLETRPN---LTPFFALVLHSTRRLAFHTADDF 418
Query: 67 EALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLG--TLKY 124
LGS ++CA++ +++ ++P I+V P ++ HL +T+GFSL +LKY
Sbjct: 419 RNLGSQFGVKCAIIAQENRKEHESILNSEQPRIIVGRPDLILYHLKHTQGFSLALASLKY 478
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
L++ + + + EI +IP R+T+LFS+T TK+V + CL+NPVKI+ ++
Sbjct: 479 LMMHTC-------YLRDILEISTMIPSERRTFLFSSTFTKEVHTMLSVCLRNPVKIDLST 531
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
KYS DTL+Q K+K+ + Y L+ V + LG RA
Sbjct: 532 KYSIADTLQQSCFMQKEKHKNDWYWYTLSNV-----------------VQRFFWRLGFRA 574
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
IPI +MSQ+K+L +LN FK+GE NIL+C+D S+GLDIP+VDMVINY+IP KDYI+R
Sbjct: 575 IPIMRYMSQAKKLRSLNAFKSGEYNILLCSDFLSKGLDIPAVDMVINYNIPRYPKDYIYR 634
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRIS 364
VG T A VAIS V+ E + IEK IGKKLP +PA EEVLLL RV EA++ +
Sbjct: 635 VGWT--AAHVNVAISFVSPDERRHFNMIEKHIGKKLPLYPAPFEEVLLLEGRVVEAEKYA 692
Query: 365 Q 365
Q
Sbjct: 693 Q 693
>gi|319795121|ref|YP_004156761.1| dead/deah box helicase domain-containing protein [Variovorax
paradoxus EPS]
gi|315597584|gb|ADU38650.1| DEAD/DEAH box helicase domain protein [Variovorax paradoxus EPS]
Length = 496
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/346 (44%), Positives = 212/346 (61%), Gaps = 6/346 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
+G+D++G AQTG+GKT AF+LP+LQ +L+ EN T PA A VL PTRELA Q+++
Sbjct: 39 SGQDVMGAAQTGTGKTAAFSLPLLQRMLK-HENASTSPARHPVRALVLLPTRELADQVAQ 97
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
Q + +LR V+ GG+DM QTL L K ++VATPGRL+DH+ K L ++Y
Sbjct: 98 QVKLYAKYTNLRSTVVFGGIDMKPQTLELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEY 156
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
+VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L+NPV IE A
Sbjct: 157 VVLDEADRMLDIGFLPDLQRILSYLPKQRTTLLFSATFSPEIKRLAGSYLQNPVTIEVAR 216
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
T T++Q + V K L I+ + + VF + LA L G R
Sbjct: 217 PNETASTVEQHFYSVSDDDKRRALKQIVKQRGITQAFVFVNSKLGCARLARSLERDGLRT 276
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
+ G SQ +RL AL FKAGE ++L+CTDVA+RGLDI V V N+DIP N++DY+HR
Sbjct: 277 TALHGDKSQDERLKALASFKAGEVDLLVCTDVAARGLDIKDVPAVFNFDIPFNAEDYVHR 336
Query: 305 VGRTARAGRTGVAISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEE 349
+GRT RAG +G+A+S + + IEKLI KK+ P E EE
Sbjct: 337 IGRTGRAGASGLAVSFASGGNDARLVADIEKLIKKKIELEPVEFEE 382
>gi|242784404|ref|XP_002480380.1| ATP dependent RNA helicase (Dbp8), putative [Talaromyces stipitatus
ATCC 10500]
gi|218720527|gb|EED19946.1| ATP dependent RNA helicase (Dbp8), putative [Talaromyces stipitatus
ATCC 10500]
Length = 538
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/379 (41%), Positives = 228/379 (60%), Gaps = 34/379 (8%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD IG ++TGSGKT AFA+PILQ E FA VL+PTRELA+QI EQF+A
Sbjct: 145 GKDCIGGSRTGSGKTIAFAVPILQKWAEDPF------GIFAVVLTPTRELALQIFEQFKA 198
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKY 124
+ + SL+ ++ GG DM Q +AL +RPH+++ATPGRL DH+ T G L ++
Sbjct: 199 ISAPQSLKPVLITGGTDMRPQAIALSQRPHVIIATPGRLADHI-RTSGEDTIVGLNRVRM 257
Query: 125 LVLDEADRLLNDDFEKSLDEI---LNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKN 176
+V+DEADRLL L ++ L+ +P RQT LF+AT+T +V+ L+ R +
Sbjct: 258 IVMDEADRLLTSGHGSMLPDVETCLSALPPSSERQTLLFTATVTPEVRALKSVPRPANRP 317
Query: 177 PVKIEAASKYSTVD---TLKQQYRFVPAKYKDCYLVYILTEVSASS--TMVFTRTCDATR 231
P+ + + TLKQ Y VP +++ +L +L+ SS ++F
Sbjct: 318 PIHVTEIGTENIAPIPPTLKQTYLQVPMTHREAFLHVLLSTEGNSSKPAIIFCNRTKTAD 377
Query: 232 LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVIN 291
LL MLR L R + + QS+R L++F+A +L+ TDVASRGLDIP+V +VIN
Sbjct: 378 LLERMLRRLSHRVTSLHSLLPQSERTANLSRFRASAARLLVATDVASRGLDIPNVSLVIN 437
Query: 292 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 351
+D+P N DY+HRVGRTARAGRTG +++LV Q +++ L IEK +G+++ ++ EEE V
Sbjct: 438 FDVPRNPDDYVHRVGRTARAGRTGESVTLVGQRDVQLVLAIEKRVGRQMVQW--EEEGVS 495
Query: 352 L--------LLERVTEAKR 362
+ +L+ V EAKR
Sbjct: 496 VESRVVKGGVLKEVGEAKR 514
>gi|168183325|ref|ZP_02617989.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum Bf]
gi|182673470|gb|EDT85431.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum Bf]
Length = 425
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/376 (40%), Positives = 225/376 (59%), Gaps = 9/376 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDL+G AQTG+GKT AFA+P+LQ L + + + A VL+PTRELAIQI+E FE
Sbjct: 38 GKDLVGCAQTGTGKTAAFAVPVLQNLSKDKKANKNPRPIRALVLAPTRELAIQIAESFEC 97
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G I+L+ AV+ GGV QT L + I++ATPGR++D L N K L +++ VLD
Sbjct: 98 YGKYINLKSAVIFGGVSQNPQTKVLREGVDILIATPGRMLD-LFNQKYIDLRNIEFFVLD 156
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ + +I++ +P++RQ LFSATM ++ KL + +K+P+++E ST
Sbjct: 157 EADRMLDMGMIHDVKKIISKLPKIRQNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSST 216
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDT+ Q+ V K K L ++L + S S +VF+ T ++A L G A I
Sbjct: 217 VDTITQEVYHVRKKQKRALLKHLLKDKSIESALVFSTTKRGANMIAKDLVEAGIEAEAIH 276
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ+ R ALN FK G+ +L+ TD+A+RG+D+ + V NY++P + Y+HR+GRT
Sbjct: 277 GNKSQNARQRALNNFKEGKIRVLVATDIAARGIDVNELSHVFNYNLPDVPETYVHRIGRT 336
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
RAG GVAIS + E + IEKLI K++P ++ R + +
Sbjct: 337 GRAGAKGVAISFCDIEETKSLKAIEKLINKEIPVVEDHPYKI-----RHINENEVKKENT 391
Query: 369 KDSGNKR---RRKGGD 381
K++ NKR +R+GG+
Sbjct: 392 KNNYNKRPFSKRQGGN 407
>gi|406973607|gb|EKD96982.1| hypothetical protein ACD_23C01154G0002, partial [uncultured
bacterium]
Length = 475
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/371 (41%), Positives = 224/371 (60%), Gaps = 5/371 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AFALP++Q +L+ EN T PA A VL PTRELA+Q++EQ
Sbjct: 38 GRDVMGAAQTGTGKTAAFALPLMQRMLK-HENASTSPARHPVRALVLLPTRELAVQVAEQ 96
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
E G +LR AV+ GG+DM QT+ L K ++VATPGRL+DH+ K L ++Y+
Sbjct: 97 VELYGKYTNLRSAVVFGGMDMKPQTIELKKGVEVLVATPGRLLDHI-EAKNCVLNQVEYV 155
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L++PV IE A
Sbjct: 156 VLDEADRMLDIGFLPDLQRILSYLPKQRTTLLFSATFSPEIKRLASSYLQDPVTIEVARS 215
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+ T++Q + V + K L IL + VF + LA L + G +
Sbjct: 216 NAAASTVEQHFYSVEGEDKRHALHQILRQRGIKQAFVFVNSKLGCARLARSLEHEGLKTT 275
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL FK+G ++L+CTDVA+RGLDI V V N+DIP +++DY+HR+
Sbjct: 276 ALHGDKSQDERLKALESFKSGGVDLLVCTDVAARGLDIKDVPAVFNFDIPFHAEDYVHRI 335
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
GRT RAG G+A++ V++ + IEKL+ K+ E EE L + + +
Sbjct: 336 GRTGRAGAEGLAVTFVSKSDQRLVTDIEKLLKTKIELEGIEFEENLPDIRKQGHINDGRR 395
Query: 366 MTIKDSGNKRR 376
+ +D ++RR
Sbjct: 396 LYREDGSDQRR 406
>gi|387792078|ref|YP_006257143.1| DNA/RNA helicase [Solitalea canadensis DSM 3403]
gi|379654911|gb|AFD07967.1| DNA/RNA helicase, superfamily II [Solitalea canadensis DSM 3403]
Length = 440
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/393 (38%), Positives = 226/393 (57%), Gaps = 5/393 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DL+G AQTG+GKT AF +PILQ L I +++ A +L+PTRELAIQI E A
Sbjct: 38 GQDLLGCAQTGTGKTAAFTIPILQLLHPIVRHEQGTTPIRALILTPTRELAIQIGESIAA 97
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G + L+ V+ GGV+ + QT+AL K I+VATPGRL+D L N K L +++ VLD
Sbjct: 98 YGKNLKLKHLVIFGGVNQLNQTVALSKGVDILVATPGRLLD-LMNQKFIHLHKVQFFVLD 156
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F + ++ +P RQT FSATM +++L + L PVK+E ST
Sbjct: 157 EADRMLDMGFVNDVKRVIAKLPEKRQTLFFSATMPPVIQQLADSILSKPVKVEVTPVSST 216
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
+T+ Q V K L ++L S +VFT+T +A L +A I
Sbjct: 217 AETINQSVYMVDKGNKRALLTHLLENDGIGSALVFTKTKHGADRIARDLNKHKIKAEAIH 276
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G SQ+ R AL+ FK+ + IL+ TD+A+RG+DI + VIN+DIP ++ Y+HR+GRT
Sbjct: 277 GDKSQNARQRALSNFKSKDIRILVATDIAARGIDIDDLLHVINFDIPYEAETYVHRIGRT 336
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
RAG +G A++ + E+ + I KLIGK +P E+ + ++R E ++ Q T
Sbjct: 337 GRAGASGTALTFCDPEEMTYLKDIVKLIGKSIPT--VEDHPFPMTIQRYLEVQQ--QATD 392
Query: 369 KDSGNKRRRKGGDEDDDIGRQFGINKKKLSKRK 401
K + N+ ++G + + G G + KK RK
Sbjct: 393 KKNDNRGSKRGFSHNKNRGGGQGHSSKKQQHRK 425
>gi|401840618|gb|EJT43365.1| DBP8-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 437
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 161/385 (41%), Positives = 230/385 (59%), Gaps = 22/385 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT AFA P+L E F VL+PTRELA+QI+EQF A
Sbjct: 45 GRDCIGGAKTGSGKTIAFAGPMLTKWSE------DPCGMFGVVLTPTRELAMQIAEQFTA 98
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYL 125
LGS +++R +V+VGG ++QQ LAL ++PH ++ATPGRL H+ ++ ++ L KYL
Sbjct: 99 LGSSMNIRVSVVVGGESIIQQALALQRKPHFIIATPGRLAHHIMSSGEDTVRGLMRAKYL 158
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRM--RQTYLFSATMTKKVKKLQRACL---KNPV-- 178
VLDEAD LL F L + +P RQT LF+AT+T +V+ LQ A + K P+
Sbjct: 159 VLDEADILLTSTFADHLATCIGALPAKDKRQTLLFTATITDQVRSLQDAPVQEGKPPLFA 218
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLAL 235
++E+ + TLK +Y VP K+ YL +LT E + ++F +L
Sbjct: 219 YQVESVDNVAIPSTLKTEYILVPEHVKEAYLYQLLTCEEYENKTAIIFVNRTMTAEILRR 278
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
L+ L R + M Q +R +L++F+A +LI TDVASRGLDIP+V++V+NYDIP
Sbjct: 279 TLKQLEVRVASLHSQMPQQERTNSLHRFRANAARVLIATDVASRGLDIPTVELVVNYDIP 338
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--L 353
++ +IHR GRTARAGR G AIS V Q ++ IE I KK+ E + ++
Sbjct: 339 SDPDVFIHRSGRTARAGRNGDAISFVTQRDVSRIQAIEDRINKKMTETNKVHDTAVIRKA 398
Query: 354 LERVTEAKRISQMTI-KDSGNKRRR 377
L +VT+AKR S M + K++ +R+R
Sbjct: 399 LTKVTKAKRESLMAMQKENFGERKR 423
>gi|239816848|ref|YP_002945758.1| DEAD/DEAH box helicase domain-containing protein [Variovorax
paradoxus S110]
gi|239803425|gb|ACS20492.1| DEAD/DEAH box helicase domain protein [Variovorax paradoxus S110]
Length = 486
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/346 (44%), Positives = 212/346 (61%), Gaps = 6/346 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
+G+D++G AQTG+GKT AF+LP+LQ +L+ EN T PA A VL PTRELA Q+++
Sbjct: 39 SGQDVMGAAQTGTGKTAAFSLPLLQRMLK-HENASTSPARHPVRALVLLPTRELADQVAQ 97
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
Q + +LR V+ GG+DM QTL L K ++VATPGRL+DH+ K L ++Y
Sbjct: 98 QVKLYAKYTNLRSTVVFGGIDMKPQTLELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEY 156
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
+VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L+NPV IE A
Sbjct: 157 VVLDEADRMLDIGFLPDLQRILSYLPKQRTTLLFSATFSPEIKRLAGSYLQNPVTIEVAR 216
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
T T++Q + V K L I+ + + VF + LA L G R
Sbjct: 217 PNETASTVEQHFYSVTDDDKRRALKQIVKQRGITQAFVFVNSKLGCARLARSLERDGLRT 276
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
+ G SQ +RL AL FKAGE ++L+CTDVA+RGLDI V V N+DIP N++DY+HR
Sbjct: 277 TALHGDKSQDERLKALASFKAGEVDLLVCTDVAARGLDIKDVPAVFNFDIPFNAEDYVHR 336
Query: 305 VGRTARAGRTGVAISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEE 349
+GRT RAG +G+A+S + + IEKLI KK+ P E EE
Sbjct: 337 IGRTGRAGASGLAVSFASGGNDARLVADIEKLIKKKIELEPVEFEE 382
>gi|311104225|ref|YP_003977078.1| ATP-dependent RNA helicase RhlE 2 [Achromobacter xylosoxidans A8]
gi|310758914|gb|ADP14363.1| ATP-dependent RNA helicase RhlE 2 [Achromobacter xylosoxidans A8]
Length = 493
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/345 (43%), Positives = 216/345 (62%), Gaps = 9/345 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF LPIL L+ +A N PA A +L+PTRELA Q+ E
Sbjct: 54 GRDVMGAAQTGTGKTAAFTLPILHRLMPLA-NTSASPARHPVRALILTPTRELADQVYES 112
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+ LR AV+ GGVD+ Q AL + ++VATPGRL+DH+ K +L + L
Sbjct: 113 VKRYSKQTPLRSAVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHVEQ-KNVNLSQVGIL 171
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L+ I+ ++P RQ LFSAT + +++KL R+ L +PV+IE A++
Sbjct: 172 VLDEADRMLDMGFLPDLERIIRLLPAQRQGLLFSATFSNEIRKLGRSYLNHPVEIEVAAR 231
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T +T+ Q +P+ K +V+++ + +VF+ T T LA L G +A
Sbjct: 232 NATANTITQIAYKMPSDAKRAAVVHLVKSRGLNQVIVFSNTKIGTARLARDLERDGVKAE 291
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G +Q+ R+ AL FKAGE +L+ TDVA+RGLD+ V VINYD+P N++DY+HR+
Sbjct: 292 SIHGDKTQADRMKALEAFKAGELEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRI 351
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP----EFPAE 346
GRT RAG +G AI+L E + L IEKLI +++P + PAE
Sbjct: 352 GRTGRAGASGEAIALFTPDEERFLLDIEKLIKREVPRGTLDVPAE 396
>gi|187934290|ref|YP_001887690.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum B str.
Eklund 17B]
gi|187722443|gb|ACD23664.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum B str.
Eklund 17B]
Length = 432
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 157/385 (40%), Positives = 223/385 (57%), Gaps = 21/385 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQ------RTVPAFFACVLSPTRELAIQI 62
GKD +G AQTG+GKT AFA+P+LQ IA+NQ RT+ A +L+PTRELAIQI
Sbjct: 38 GKDFLGCAQTGTGKTAAFAIPVLQ---NIAQNQKKSDKPRTIKAL---ILAPTRELAIQI 91
Query: 63 SEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL 122
E F +++ V+ GGV QT LG+ I++ATPGRL+D L + K L +
Sbjct: 92 EENFTLYSKHTNIKNTVIFGGVSQKPQTRILGEGVDILIATPGRLLD-LIDQKYIDLSNV 150
Query: 123 KYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEA 182
K+ VLDEADR+ + + + +I+ +P++RQ LFSATM +VK L + LK+PVK+E
Sbjct: 151 KHFVLDEADRMFDMGMVRDVKKIVAKLPKVRQNLLFSATMPSEVKSLVNSILKDPVKVEV 210
Query: 183 ASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQ 242
A ST+DT+ Q FV K K LV++L + S S +VF+RT + L G
Sbjct: 211 APVSSTIDTITQGVYFVTKKDKKSLLVHLLKDESIKSLLVFSRTKYGANNIVKDLAKTGT 270
Query: 243 RAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYI 302
+ I G+ SQ+ R AL+ FK G+ +L+ TD+A+RG+D+ + VINYD+P + Y+
Sbjct: 271 ESQAIHGNKSQNARQLALSNFKEGKIRVLVATDIAARGIDVDGLSHVINYDLPDVPETYV 330
Query: 303 HRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
HR+GRT RAG +GVAIS + E IEK IGK +P E E + + + K
Sbjct: 331 HRIGRTGRAGNSGVAISFCDVDEKSALKDIEKTIGKNIPVMKNVEFERIAITREPAQRKE 390
Query: 363 ISQMTIKDS--------GNKRRRKG 379
+ T + G+KRR +G
Sbjct: 391 ADKKTTDANKKPKRNWYGDKRRSQG 415
>gi|299532061|ref|ZP_07045456.1| hypothetical protein CTS44_14723 [Comamonas testosteroni S44]
gi|298719976|gb|EFI60938.1| hypothetical protein CTS44_14723 [Comamonas testosteroni S44]
Length = 464
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/340 (43%), Positives = 207/340 (60%), Gaps = 5/340 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
GKD++G AQTG+GKT AF+LP+LQ L+ EN PA A VL PTRELA Q+++Q
Sbjct: 31 GKDVMGAAQTGTGKTAAFSLPLLQRLMR-HENASASPARHPVRALVLLPTRELADQVAQQ 89
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
LR V+ GG+DM QT+ L K ++VATPGRL+DH+ K L ++Y+
Sbjct: 90 IALYAKHTKLRSTVVFGGMDMKPQTIELKKGVEVLVATPGRLLDHI-EAKNVVLNQVEYV 148
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L++PV IE A
Sbjct: 149 VLDEADRMLDIGFLPDLQRILSYLPKSRTTLLFSATFSPEIKRLAGSYLQDPVTIEVARP 208
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
T T++Q++ V K + +L E +F+ + L L G RA
Sbjct: 209 NETASTVEQRFYKVTDDDKRYAIRSVLKERDIRQAFIFSNSKLGCARLTRALERDGLRAA 268
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL FKAGE ++L+CTDVA+RGLDI V V NYD+P N++DY+HR+
Sbjct: 269 ALHGDKSQDERLKALEAFKAGEVDLLVCTDVAARGLDIKDVPAVFNYDVPFNAEDYVHRI 328
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA 345
GRT RAG +G+A++LV ++ IEKL KK+ PA
Sbjct: 329 GRTGRAGASGLAVTLVTDHDSRNVADIEKLTKKKIEVEPA 368
>gi|264679797|ref|YP_003279706.1| hypothetical protein CtCNB1_3664 [Comamonas testosteroni CNB-2]
gi|262210312|gb|ACY34410.1| hypothetical conserved protein [Comamonas testosteroni CNB-2]
Length = 453
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/340 (43%), Positives = 207/340 (60%), Gaps = 5/340 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
GKD++G AQTG+GKT AF+LP+LQ L+ EN PA A VL PTRELA Q+++Q
Sbjct: 20 GKDVMGAAQTGTGKTAAFSLPLLQRLMR-HENASASPARHPVRALVLLPTRELADQVAQQ 78
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
LR V+ GG+DM QT+ L K ++VATPGRL+DH+ K L ++Y+
Sbjct: 79 IALYAKHTKLRSTVVFGGMDMKPQTIELKKGVEVLVATPGRLLDHI-EAKNVVLNQVEYV 137
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L++PV IE A
Sbjct: 138 VLDEADRMLDIGFLPDLQRILSYLPKSRTTLLFSATFSPEIKRLAGSYLQDPVTIEVARP 197
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
T T++Q++ V K + +L E +F+ + L L G RA
Sbjct: 198 NETASTVEQRFYKVTDDDKRYAIRSVLKERDIRQAFIFSNSKLGCARLTRALERDGLRAA 257
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL FKAGE ++L+CTDVA+RGLDI V V NYD+P N++DY+HR+
Sbjct: 258 ALHGDKSQDERLKALEAFKAGEVDLLVCTDVAARGLDIKDVPAVFNYDVPFNAEDYVHRI 317
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA 345
GRT RAG +G+A++LV ++ IEKL KK+ PA
Sbjct: 318 GRTGRAGASGLAVTLVTDHDSRNVADIEKLTKKKIEVEPA 357
>gi|406603762|emb|CCH44787.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 435
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 163/411 (39%), Positives = 237/411 (57%), Gaps = 23/411 (5%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
A D IG A+TGSGKT AF P+L E F VL+PTRELA+QI+EQF
Sbjct: 31 ACHDCIGGAKTGSGKTIAFGAPMLTKWSE------DPMGIFGLVLTPTRELALQIAEQFA 84
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---Y 124
ALG+ +++R AV+VGG M++Q + L +PH V+ATPGRL DH+ N+ ++ LK Y
Sbjct: 85 ALGAAMNIRIAVIVGGESMVEQAIKLQGKPHFVIATPGRLADHILNSGEDTIEGLKRVRY 144
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRM--RQTYLFSATMTKKVKKLQ-RACLKNPVK-- 179
LVLDEADRLL++ F L +++P RQT LF+AT+T V+ L+ R N K
Sbjct: 145 LVLDEADRLLSNSFGSDLQRCFSILPSADKRQTLLFTATVTDAVRALKDRPTPTNKPKLF 204
Query: 180 ---IEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLA 234
+++ K + L+ + VP+ K+ YL IL+ + + MVF ++
Sbjct: 205 IHEVDSVDKVAIPSQLETYFMLVPSYVKESYLYSILSHEDNEKKTAMVFVNRTHTAEVVR 264
Query: 235 LMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDI 294
LRNL R + + Q +R +L++F+A +LI TDVASRGLDIP V++VINYDI
Sbjct: 265 RTLRNLEIRVASLHSELPQQERTNSLHRFRANAARVLIATDVASRGLDIPDVELVINYDI 324
Query: 295 PTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFP--AEEEEVLL 352
P + D++HRVGRTARAGR G ISLV++ ++ IE+ I KKL ++ + + +
Sbjct: 325 PADPDDFVHRVGRTARAGRKGQTISLVSEKDVSRIQAIEERINKKLDKYEKITDNKVIKK 384
Query: 353 LLERVTEAKR--ISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKKLSKRK 401
L+ V+ AKR ++M+ ++ G ++R D + I K K RK
Sbjct: 385 SLQSVSIAKREAEAEMSKEEFGERKRTIKRKSQKDDSSNYKIKKPKNKSRK 435
>gi|187777742|ref|ZP_02994215.1| hypothetical protein CLOSPO_01334 [Clostridium sporogenes ATCC
15579]
gi|187774670|gb|EDU38472.1| DEAD/DEAH box helicase [Clostridium sporogenes ATCC 15579]
Length = 425
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 155/379 (40%), Positives = 229/379 (60%), Gaps = 15/379 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLE---IAENQRTVPAFFACVLSPTRELAIQISEQ 65
GKDL+G AQTG+GKT AFA+P+LQ L + + +N RT+ A VL+PTRELAIQI E
Sbjct: 38 GKDLVGCAQTGTGKTAAFAVPVLQNLSKDKKVNKNPRTIRAL---VLAPTRELAIQIGES 94
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
FE G I+L+ AV+ GGV QT AL + I++ATPGR++D L N K L ++
Sbjct: 95 FECYGKYINLKSAVIFGGVSQNPQTKALREGVDILIATPGRMLD-LFNQKYIDLRNIECF 153
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ + +I++ +P++RQ LFSATM ++ KL + +K+P+++E
Sbjct: 154 VLDEADRMLDMGMIHDVKKIISKLPKVRQNLLFSATMPSEITKLVDSIVKDPIRVEVTPV 213
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
STVDT+ Q+ V K K L ++L + S S +VF+ T ++A L G A
Sbjct: 214 SSTVDTITQEVYHVRKKQKRSLLKHLLKDESIESALVFSTTKRGANMIAKDLVEAGIEAE 273
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G+ SQ+ R ALN FK G+ +L+ TD+A+RG+D+ + V NY++P + Y+HR+
Sbjct: 274 AIHGNKSQNARQRALNNFKEGKIRVLVATDIAARGIDVNELSHVFNYNLPDVPETYVHRI 333
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
GRT RAG GVAIS + E++ IEKLI K++P ++ R + +
Sbjct: 334 GRTGRAGAKGVAISFCDIEEIKSLKAIEKLIHKEIPVVEDHPYKI-----RHINEDEVKK 388
Query: 366 MTIKDSGNKR---RRKGGD 381
K++ NKR +R+GG+
Sbjct: 389 ENTKNNYNKRPSSKRQGGN 407
>gi|390945021|ref|YP_006408782.1| DNA/RNA helicase [Belliella baltica DSM 15883]
gi|390418449|gb|AFL86027.1| DNA/RNA helicase, superfamily II [Belliella baltica DSM 15883]
Length = 406
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 146/332 (43%), Positives = 206/332 (62%), Gaps = 4/332 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+DL+G AQTG+GKT AF++PI+Q LL + + +R P A +L+PTRELAIQI E A
Sbjct: 39 RDLLGCAQTGTGKTAAFSIPIIQ-LLALQKQRR--PGIKALILTPTRELAIQIDESIAAY 95
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
G ++ V+ GGV + QT AL + I+VATPGRL+D L N K L L++ VLDE
Sbjct: 96 GKFTDIKHTVIFGGVSQLHQTNALKRGVDILVATPGRLLD-LINQKFIDLRQLQFFVLDE 154
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADR+L+ F + +I+ ++P RQT FSATM +++KL L+NP K+E STV
Sbjct: 155 ADRMLDMGFIHDVKKIIALLPAKRQTLFFSATMPPEIQKLADVLLRNPSKVEVTPPSSTV 214
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
D + Q+ + K L ++L + +VFTRT + L G RA I G
Sbjct: 215 DKIDQRLYYTNKNDKPKLLQHLLDAYRIRTALVFTRTKHGADKVVKFLARDGVRAAAIHG 274
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+ SQ+ R AL FKAG+ +L+ TD+A+RG+DI + VINYD+P S+ Y+HR+GRT
Sbjct: 275 NKSQNARQNALKDFKAGKLQVLVATDIAARGIDIDELAHVINYDLPNVSETYVHRIGRTG 334
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
RAG TG+AIS+ ++ + + IEKLIGK +P
Sbjct: 335 RAGNTGIAISICDEEQRKELKDIEKLIGKDIP 366
>gi|251780900|ref|ZP_04823820.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243085215|gb|EES51105.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 432
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 157/385 (40%), Positives = 223/385 (57%), Gaps = 21/385 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQ------RTVPAFFACVLSPTRELAIQI 62
GKD +G AQTG+GKT AFA+P+LQ IA+NQ RT+ A +L+PTRELAIQI
Sbjct: 38 GKDFLGCAQTGTGKTAAFAIPVLQ---NIAKNQNKSDKSRTIKAL---ILAPTRELAIQI 91
Query: 63 SEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL 122
E F +++ V+ GGV QT LG+ I++ATPGRL+D L + K L +
Sbjct: 92 EENFTLYSKHTNIKNTVIFGGVSQKPQTRILGEGVDILIATPGRLLD-LIDQKYIDLSNV 150
Query: 123 KYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEA 182
K+ VLDEADR+ + + + +I+ +P++RQ LFSATM +VK L + LK+PVK+E
Sbjct: 151 KHFVLDEADRMFDMGMVRDVKKIVAKLPKVRQNLLFSATMPSEVKSLVNSILKDPVKVEV 210
Query: 183 ASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQ 242
A ST+DT+ Q FV K K LV++L + S S +VF+RT + L G
Sbjct: 211 APVSSTIDTITQGVYFVTKKDKKSLLVHLLKDESIKSLLVFSRTKYGANNIVKDLAKTGT 270
Query: 243 RAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYI 302
+ I G+ SQ+ R AL+ FK G+ +L+ TD+A+RG+D+ + VINYD+P + Y+
Sbjct: 271 ESQAIHGNKSQNARQLALSNFKEGKIRVLVATDIAARGIDVDGLSHVINYDLPDVPETYV 330
Query: 303 HRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
HR+GRT RAG +GVAIS + E IEK IGK +P E E + + + K
Sbjct: 331 HRIGRTGRAGNSGVAISFCDVDEKSALKDIEKTIGKNIPVMKNVEFERIAITREPAQRKE 390
Query: 363 ISQMTIKDS--------GNKRRRKG 379
+ T + G+KRR +G
Sbjct: 391 ADKKTTDANKKPKRNWYGDKRRSQG 415
>gi|398811913|ref|ZP_10570698.1| DNA/RNA helicase, superfamily II [Variovorax sp. CF313]
gi|398079456|gb|EJL70309.1| DNA/RNA helicase, superfamily II [Variovorax sp. CF313]
Length = 487
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 153/346 (44%), Positives = 212/346 (61%), Gaps = 6/346 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
+G+D++G AQTG+GKT AF+LP+LQ +L+ EN T PA A VL PTRELA Q+++
Sbjct: 39 SGQDVMGAAQTGTGKTAAFSLPLLQRMLK-HENASTSPARHPVRALVLLPTRELADQVAQ 97
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
Q + +LR V+ GG+DM QTL L K ++VATPGRL+DH+ K L ++Y
Sbjct: 98 QVKLYAKYTNLRSTVVFGGIDMKPQTLELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEY 156
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
+VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L+NPV IE A
Sbjct: 157 VVLDEADRMLDIGFLPDLQRILSYLPKQRTTLLFSATFSPEIKRLASSYLQNPVTIEVAR 216
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
T T++Q + V K L I+ + + VF + LA L G R
Sbjct: 217 PNETASTVEQHFYSVGDDDKRRALKQIVKQRGITQAFVFVNSKLGCARLARSLERDGLRT 276
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
+ G SQ +RL AL FKAGE ++L+CTDVA+RGLDI V V N+D+P N++DY+HR
Sbjct: 277 TALHGDKSQDERLKALAAFKAGEVDLLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHR 336
Query: 305 VGRTARAGRTGVAISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEE 349
+GRT RAG +G+A+S + + IEKLI KK+ P E EE
Sbjct: 337 IGRTGRAGASGLAVSFASGGNDARLVADIEKLIKKKIELEPVEFEE 382
>gi|89901799|ref|YP_524270.1| DEAD/DEAH box helicase-like protein [Rhodoferax ferrireducens T118]
gi|89346536|gb|ABD70739.1| DEAD/DEAH box helicase-like [Rhodoferax ferrireducens T118]
Length = 506
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 207/335 (61%), Gaps = 5/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AFALP+LQ +L+ EN T PA A VL PTRELA Q+++
Sbjct: 52 GRDVMGAAQTGTGKTAAFALPLLQRMLK-HENSSTSPARHPVRALVLLPTRELADQVAQA 110
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+ +LR AV+ GG+DM QTL L K ++VATPGRL+DH+ K L ++Y+
Sbjct: 111 IKDYAVHTNLRSAVVFGGMDMKPQTLELKKGVEVLVATPGRLLDHI-EAKNCVLNQVEYV 169
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L++PV IE A
Sbjct: 170 VLDEADRMLDIGFLPDLQRILSYLPKQRITLLFSATFSSEIKRLASSYLQDPVTIEVARS 229
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+ T++Q + V A K L IL VF + LA L + G +
Sbjct: 230 NAAASTVEQHFYSVDADDKRHALHQILKSRGMKQAFVFVNSKLGCARLARSLEHEGLKTT 289
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL FK+GE ++L+CTDVA+RGLDI V V N+DIP N++DY+HR+
Sbjct: 290 ALHGDKSQDERLKALEAFKSGEVDLLVCTDVAARGLDIKDVPAVFNFDIPFNAEDYVHRI 349
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
GRT RAG G+A+S V + ++ IEKL+ K+
Sbjct: 350 GRTGRAGAAGLAVSFVAKSDIRLVADIEKLLNTKI 384
>gi|452125822|ref|ZP_21938405.1| ATP-dependent RNA helicase [Bordetella holmesii F627]
gi|452129183|ref|ZP_21941759.1| ATP-dependent RNA helicase [Bordetella holmesii H558]
gi|451920917|gb|EMD71062.1| ATP-dependent RNA helicase [Bordetella holmesii F627]
gi|451925053|gb|EMD75193.1| ATP-dependent RNA helicase [Bordetella holmesii H558]
Length = 457
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 227/388 (58%), Gaps = 13/388 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF +PIL L+ +A N PA A +L+PTRELA Q+ E
Sbjct: 27 GRDVMGAAQTGTGKTAAFTVPILHRLMPLA-NSSASPARHPVRALILTPTRELADQVYES 85
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+ LR AV+ GGVD+ Q AL + I+VATPGRL+DH+ K +L + L
Sbjct: 86 VKRYSLHTPLRSAVVFGGVDIGPQKEALRRGCEILVATPGRLLDHVEQ-KNVNLSQVGIL 144
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L+ I+ ++P RQ LFSAT + +++KL R+ L P+++E A++
Sbjct: 145 VLDEADRMLDMGFLPDLERIIRLLPPQRQGLLFSATFSNEIRKLGRSYLNQPIELEVAAR 204
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T DT+ Q + K +V+++ +VF+ T T LA L G +A
Sbjct: 205 NATADTVTQIAYPMTGDAKRAAVVHLVKSRGLKQVIVFSNTKIGTARLARDLERDGVKAE 264
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G SQ+ R+ AL FKAGE +L+ TDVA+RGLD+ V VINYD+P N++DY+HR+
Sbjct: 265 SIHGDKSQADRMKALEAFKAGELEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRI 324
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP----EFPAEEEEVLLLLERVTEAK 361
GRT RAG +G AI+L E + L IEKLI +++P E PAE LL R E
Sbjct: 325 GRTGRAGASGEAIALFTPEEERYLLDIEKLIKRQVPRGKLELPAE----LLAHGRGRERS 380
Query: 362 RISQMTIKDSGNKRRRKGGDEDDDIGRQ 389
+ G++ R+G D D R+
Sbjct: 381 GSRESREGRDGSRENREGRDSWRDTNRR 408
>gi|358372222|dbj|GAA88826.1| dead box ATP-dependent rna helicase [Aspergillus kawachii IFO 4308]
Length = 522
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 163/410 (39%), Positives = 240/410 (58%), Gaps = 35/410 (8%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+G+D IG ++TGSGKT AF++P+LQ E F VL+PTRELA+QI EQ +
Sbjct: 128 SGRDCIGGSRTGSGKTIAFSVPMLQKWAEDPF------GIFGLVLTPTRELALQIYEQIK 181
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS----LGTLK 123
A+ + S++ ++ GG DM Q LAL +RPH+V+ATPGRL DH+ NT G L ++
Sbjct: 182 AISAPQSMKPLLITGGTDMRPQALALAQRPHVVIATPGRLADHI-NTSGTDTIRGLKRVR 240
Query: 124 YLVLDEADRLLNDDFEKSLDEI---LNVIP--RMRQTYLFSATMTKKVKKLQ---RACLK 175
+VLDEADRLL+ L ++ L+ +P RQT LF+AT+T +V+ L+ R K
Sbjct: 241 MVVLDEADRLLSPGHGSMLPDVETCLSALPPSSERQTLLFTATLTPEVRALKSMPRPASK 300
Query: 176 NPV---KIEAASKYSTVDTLKQQYRFVPAKYKDCYL-VYILTEVSAS-STMVFTRTCDAT 230
P+ +I + S TLKQ Y VP +++ +L V + TE +AS ++F
Sbjct: 301 PPIFVTEISTENNASIPPTLKQTYLKVPMTHREAFLHVLLSTEANASKPAIIFCNHTKTA 360
Query: 231 RLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVI 290
LL MLR L R + + QS+R L +F+A +L+ TDVASRGLDIPSV++V+
Sbjct: 361 DLLERMLRRLSHRVTSLHSLLPQSERNANLARFRASAARLLVATDVASRGLDIPSVELVV 420
Query: 291 NYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEV 350
N+D+P N DY+HRVGRTARAGR G +++LV Q ++ L IE+ +G+++ E+ E V
Sbjct: 421 NFDVPRNPDDYVHRVGRTARAGRKGESVTLVGQRDVSLVLAIEERVGRQMEEWSEEGVSV 480
Query: 351 LLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQ-FGINKKKLSK 399
E + + +K+ G +R G+ ++ GR G + KL K
Sbjct: 481 --------EGRVVRTGVLKEVGEAKREANGEIEE--GRDVLGRKRNKLKK 520
>gi|237793963|ref|YP_002861515.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum Ba4 str.
657]
gi|229261675|gb|ACQ52708.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum Ba4 str.
657]
Length = 425
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 150/376 (39%), Positives = 224/376 (59%), Gaps = 9/376 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDL+G AQTG+GKT AFA+P+LQ L + + + A VL+PTRELAIQI+E FE
Sbjct: 38 GKDLVGCAQTGTGKTAAFAVPVLQNLSKDKKANKNPRPIRALVLAPTRELAIQIAESFEC 97
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G I+L+ V+ GGV QT L + I++ATPGR++D L N K L +++ VLD
Sbjct: 98 YGKYINLKSVVIFGGVSQNPQTKVLREGVDILIATPGRMLD-LFNQKYIDLRNIEFFVLD 156
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ + +I++ +P++RQ LFSATM ++ KL + +K+P+++E ST
Sbjct: 157 EADRMLDMGMIHDVKKIISKLPKIRQNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSST 216
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDT+ Q+ V K K L ++L + S S +VF+ T ++A L G A I
Sbjct: 217 VDTITQEVYHVRKKQKRALLKHLLKDKSIESALVFSTTKRGANMIAKDLVEAGIEAEAIH 276
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ+ R ALN FK G+ +L+ TD+A+RG+D+ + V NY++P + Y+HR+GRT
Sbjct: 277 GNKSQNARQRALNNFKEGKIRVLVATDIAARGIDVNELSHVFNYNLPDVPETYVHRIGRT 336
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
RAG GVAIS + E + IEKLI K++P ++ R + +
Sbjct: 337 GRAGAKGVAISFCDIEETKSLKAIEKLINKEIPVVEDHPYKI-----RHINENEVKKENT 391
Query: 369 KDSGNKR---RRKGGD 381
K++ NKR +R+GG+
Sbjct: 392 KNNYNKRPFSKRQGGN 407
>gi|255534886|ref|YP_003095257.1| ATP-dependent RNA helicase RhlE [Flavobacteriaceae bacterium
3519-10]
gi|255341082|gb|ACU07195.1| ATP-dependent RNA helicase RhlE [Flavobacteriaceae bacterium
3519-10]
Length = 417
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 168/400 (42%), Positives = 232/400 (58%), Gaps = 27/400 (6%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLE--IAENQRTVPAFFACVLSPTRELAIQISEQF 66
G+DL+G AQTG+GKT AFA+PILQ L E I NQ A +L+PTRELAIQI E F
Sbjct: 38 GRDLLGTAQTGTGKTAAFAIPILQNLTEKNIRNNQ-----IKALILTPTRELAIQIEESF 92
Query: 67 EALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYL 125
A G + LR V+ GGV Q AL K I+VATPGRL+D ++ +G SL L+
Sbjct: 93 NAYGRHLRLRNLVVFGGVKQSGQEAALKKGVDILVATPGRLLDFIS--QGIISLKNLEIF 150
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F + I+ ++P RQT FSAT ++ KL + L NPVK+E A
Sbjct: 151 VLDEADRMLDMGFVHDVKRIIKLLPPKRQTLFFSATFPDEISKLANSMLTNPVKVEVAPV 210
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T DT+KQ+ FV + K L +IL + S +VF+RT +A L++ A
Sbjct: 211 SATADTIKQKVYFVEKENKLELLTHILMNDISDSVLVFSRTKHGADKIARKLQSHKISAE 270
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G+ SQ++R ALN FK+G+ IL+ TD+A+RG+DI + V+N+++ S+ Y+HR+
Sbjct: 271 AIHGNKSQNQRQNALNNFKSGKTRILVATDIAARGIDIDELKYVVNFELSDVSETYVHRI 330
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
GRT RAG G +IS V+ +L EKLIGKK+P E++ + + E KR
Sbjct: 331 GRTGRAGADGSSISFVDGLDLVNLKSTEKLIGKKIP----VEKDHPFHTDNLKEEKR--- 383
Query: 366 MTIKDSGNK----RRRKGGDEDDDIGRQFGINKKKLSKRK 401
DS NK R R G E IG + NK ++ +
Sbjct: 384 ----DSNNKPFTPRPRAQGRE--SIGSKKPNNKSNFTRNR 417
>gi|188587881|ref|YP_001922673.1| putative ATP-dependent RNA helicase RhlE [Clostridium botulinum E3
str. Alaska E43]
gi|188498162|gb|ACD51298.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum E3 str.
Alaska E43]
Length = 432
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 157/385 (40%), Positives = 222/385 (57%), Gaps = 21/385 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQ------RTVPAFFACVLSPTRELAIQI 62
GKD +G AQTG+GKT AFA+P+LQ IA+NQ RT+ A +L+PTRELAIQI
Sbjct: 38 GKDFLGCAQTGTGKTAAFAIPVLQ---NIAKNQNKSDKSRTIKAL---ILAPTRELAIQI 91
Query: 63 SEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL 122
E F +++ V+ GGV QT LG+ I++ATPGRL+D L + K L +
Sbjct: 92 EENFTLYSKHTNIKNTVIFGGVSQKPQTRILGEGVDILIATPGRLLD-LIDQKYIDLSNV 150
Query: 123 KYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEA 182
K+ VLDEADR+ + + + +I+ +P++RQ LFSATM +VK L + LK+PVK+E
Sbjct: 151 KHFVLDEADRMFDMGMVRDVKKIVAKLPKVRQNLLFSATMPSEVKSLVNSILKDPVKVEV 210
Query: 183 ASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQ 242
A ST+DT+ Q FV K K LV++L + S S +VF+RT + L G
Sbjct: 211 APVSSTIDTITQGVYFVTKKDKKSLLVHLLKDESIKSLLVFSRTKYGANNIVKDLAKTGT 270
Query: 243 RAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYI 302
+ I G+ SQ+ R AL+ FK G+ +L+ TD+A+RG+D+ + VINYD+P + Y+
Sbjct: 271 ESQAIHGNKSQNARQLALSNFKEGKIRVLVATDIAARGIDVDGLSHVINYDLPDVPETYV 330
Query: 303 HRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
HR+GRT RAG +GVAIS + E IEK IGK +P E E + + + K
Sbjct: 331 HRIGRTGRAGNSGVAISFCDVDEKSSLKDIEKTIGKNIPVMKNVEFERIAITREPAQRKE 390
Query: 363 ISQMTIKDS--------GNKRRRKG 379
+ T + G KRR +G
Sbjct: 391 ADKKTTDANKKPKRNWYGEKRRSQG 415
>gi|50289845|ref|XP_447354.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690916|sp|Q6FQZ0.1|DBP8_CANGA RecName: Full=ATP-dependent RNA helicase DBP8
gi|49526664|emb|CAG60291.1| unnamed protein product [Candida glabrata]
Length = 437
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 160/385 (41%), Positives = 228/385 (59%), Gaps = 21/385 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT AFA P+L E F VL+PTRELA+QI+EQF A
Sbjct: 46 GRDCIGGAKTGSGKTIAFAGPMLTQWSE------DPTGMFGIVLTPTRELAMQIAEQFTA 99
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YL 125
LGS +++R A++VGG ++ Q L L ++PH ++ATPGRL H+ N+ ++G LK YL
Sbjct: 100 LGSYMNIRVALVVGGESIVDQALQLQRKPHFIIATPGRLAHHILNSGDDTVGGLKRVKYL 159
Query: 126 VLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACL---KNPV-- 178
VLDEAD LL + F L + +P RQT LF+AT+T +V+ LQ A + K P+
Sbjct: 160 VLDEADILLTETFSNDLKTCVGALPPKEKRQTLLFTATITDQVRALQDAPVQKGKQPLFC 219
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT-EVSASST-MVFTRTCDATRLLAL 235
++E + TL +Y VP K+ YL +LT E A+ST ++F A +L
Sbjct: 220 YEVENVDNVAIPSTLNTEYVLVPEHVKEAYLYQLLTCESYANSTAIIFVNRTTAAEVLRR 279
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
L+ L R + M Q +R ++++F+A +LI TDVASRGLDIP+V++VINYDIP
Sbjct: 280 TLKALDVRVASLHSQMPQQERTNSMHRFRANAARVLIATDVASRGLDIPTVELVINYDIP 339
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--L 353
++ +IHR GRTARAGR G AIS + Q ++ IE I K+ E + ++
Sbjct: 340 SDPDTFIHRSGRTARAGRKGDAISFITQRDVSRIEAIEARINMKMTECDKVHDTAVIRKA 399
Query: 354 LERVTEAKRISQMTIKDSGNKRRRK 378
L +V++AKR + M ++ RRK
Sbjct: 400 LTKVSKAKREALMAMEKENFGERRK 424
>gi|222110266|ref|YP_002552530.1| dead/deah box helicase domain-containing protein [Acidovorax ebreus
TPSY]
gi|221729710|gb|ACM32530.1| DEAD/DEAH box helicase domain protein [Acidovorax ebreus TPSY]
Length = 484
Score = 267 bits (683), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 148/344 (43%), Positives = 210/344 (61%), Gaps = 5/344 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
GKD++G AQTG+GKT AF+LP+LQ LL+ EN PA A VL PTRELA Q+++Q
Sbjct: 40 GKDVMGAAQTGTGKTAAFSLPLLQRLLK-HENSSASPARHPVRALVLLPTRELADQVAQQ 98
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
LR V+ GG+DM QT+ L K ++VATPGRL+DH+ K L ++Y+
Sbjct: 99 IALYAKYTKLRSTVVFGGMDMKPQTIELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYV 157
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L++P+ IE A
Sbjct: 158 VLDEADRMLDIGFLPDLQRILSYLPKQRTTLLFSATFSPEIKRLAGSYLQDPITIEVARP 217
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
T T++Q++ V K + ++L E +F + LA L G +
Sbjct: 218 NETASTVEQRFFAVDGDDKRRAIRHVLNERGLKQAFIFVNSKLGCARLARSLERDGLKTA 277
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL+ FK+GE ++L+CTDVA+RGLDI V V NYD+P N++DY+HR+
Sbjct: 278 ALHGDKSQDERLKALDAFKSGEVDLLVCTDVAARGLDIKDVPAVFNYDVPFNAEDYVHRI 337
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEE 349
GRT RAG +G+A++L + IEKLI KK+ P E +E
Sbjct: 338 GRTGRAGASGLAVTLAASSDTRLVADIEKLIKKKIELEPLELQE 381
>gi|424834031|ref|ZP_18258749.1| ATP-dependent RNA helicase RhlE [Clostridium sporogenes PA 3679]
gi|365979266|gb|EHN15331.1| ATP-dependent RNA helicase RhlE [Clostridium sporogenes PA 3679]
Length = 425
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 156/378 (41%), Positives = 227/378 (60%), Gaps = 13/378 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLE---IAENQRTVPAFFACVLSPTRELAIQISEQ 65
GKDL+G AQTG+GKT AFA+P+LQ L + + +N RT+ A VL+PTRELAIQI E
Sbjct: 38 GKDLVGCAQTGTGKTAAFAVPVLQNLSKDKKVNKNPRTIRAL---VLAPTRELAIQIGES 94
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
FE G I+L+ AV+ GGV QT AL + I++ATPGR++D L N K L ++
Sbjct: 95 FECYGKYINLKSAVIFGGVSQNPQTKALREGVDILIATPGRMLD-LFNQKYIDLRNIECF 153
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ + +I++ +P++RQ LFSATM ++ KL + +K+P+++E
Sbjct: 154 VLDEADRMLDMGMIHDVKKIISKLPKVRQNLLFSATMPSEITKLVDSIVKDPIRVEVTPV 213
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
STVDT+ Q+ V K K L ++L + S S +VF+ T ++A L G A
Sbjct: 214 SSTVDTITQEVYHVRKKQKRSLLKHLLKDESIDSALVFSTTKRGANMIAKDLVEAGIEAE 273
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G+ SQ+ R ALN FK G +L+ TD+A+RG+D+ + V NY++P + Y+HR+
Sbjct: 274 AIHGNKSQNARQRALNNFKEGNIRVLVATDIAARGIDVNELSHVFNYNLPDVPETYVHRI 333
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
GRT RAG GVAIS + E + IEKLI K++P EE + + E + +
Sbjct: 334 GRTGRAGAKGVAISFCDIEETKSLKAIEKLIHKEIPVV----EEHPYKIRHINEDEVKEE 389
Query: 366 MTIKDSGNK--RRRKGGD 381
T +S K +R+GG+
Sbjct: 390 NTNNNSNKKPSSKRQGGN 407
>gi|399116636|emb|CCG19443.1| putative ATP-dependent RNA helicase [Taylorella asinigenitalis
14/45]
Length = 444
Score = 267 bits (682), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 146/335 (43%), Positives = 210/335 (62%), Gaps = 5/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFAC---VLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF LP+L ++ A + T PA VL+PTRELA QIS+
Sbjct: 41 GRDVMGAAQTGTGKTAAFTLPLLNRMIPKA-SFSTSPAKHPVRMLVLTPTRELAEQISKN 99
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
A G+ LR +++ GGVD Q L L + IV+ATPGRL+DH+ + +L +++L
Sbjct: 100 VIAYADGLPLRTSLIYGGVDFNAQKLELMRGADIVIATPGRLLDHVEQ-RTINLNQVEFL 158
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
+LDEADR+L+ F L +IL +P RQ+ L+SAT + ++ L + L +PV+I AS
Sbjct: 159 ILDEADRMLDMGFMPDLLKILAQLPSRRQSLLYSATFSDNIRSLAQKFLHDPVEITVASN 218
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
ST T+ Q+ V K+ L+Y+L + ++ ++F+ + L L NL A
Sbjct: 219 NSTASTITQEIFSVSEAEKNAALLYLLASRNFNNVIIFSNRKITCKNLERYLNNLDLSAQ 278
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G +QS+R ALN FK+ +CNIL+ TDVA+RGLDI VD VINY++P S+DY+HR+
Sbjct: 279 SLHGDKTQSERTKALNLFKSAKCNILVATDVAARGLDISDVDAVINYELPPTSEDYVHRI 338
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
GRT RAGR G+AIS+ + E E +IE LIG K
Sbjct: 339 GRTGRAGRKGIAISMYSSDEEESLHEIETLIGTKF 373
>gi|121593545|ref|YP_985441.1| DEAD/DEAH box helicase domain-containing protein [Acidovorax sp.
JS42]
gi|120605625|gb|ABM41365.1| DEAD/DEAH box helicase domain protein [Acidovorax sp. JS42]
Length = 484
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 148/344 (43%), Positives = 209/344 (60%), Gaps = 5/344 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
GKD++G AQTG+GKT AF+LP+LQ LL+ EN PA A VL PTRELA Q+++Q
Sbjct: 40 GKDVMGAAQTGTGKTAAFSLPLLQRLLK-HENSSASPARHPVRALVLLPTRELADQVAQQ 98
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
LR V+ GG+DM QT+ L K ++VATPGRL+DH+ K L ++Y+
Sbjct: 99 IALYAKYTKLRSTVVFGGMDMKPQTIELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYV 157
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L++P+ IE A
Sbjct: 158 VLDEADRMLDIGFLPDLQRILSYLPKQRTTLLFSATFSPEIKRLAGSYLQDPITIEVARP 217
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
T T++Q++ V K + ++L E +F + LA L G +
Sbjct: 218 NETASTVEQRFFAVDGDDKRRAIRHVLNERGLKQAFIFVNSKLGCARLARSLERDGLKTA 277
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL FK+GE ++L+CTDVA+RGLDI V V NYD+P N++DY+HR+
Sbjct: 278 ALHGDKSQDERLKALEAFKSGEVDLLVCTDVAARGLDIKDVPAVFNYDVPFNAEDYVHRI 337
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEE 349
GRT RAG +G+A++L + IEKLI KK+ P E +E
Sbjct: 338 GRTGRAGASGLAVTLAASSDTRLVADIEKLIKKKIELEPLELQE 381
>gi|225560188|gb|EEH08470.1| ATP-dependent RNA helicase DBP8 [Ajellomyces capsulatus G186AR]
Length = 539
Score = 266 bits (681), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 161/378 (42%), Positives = 231/378 (61%), Gaps = 32/378 (8%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA PILQ + AE+ + FA +L+PTRELA+QI EQ +A
Sbjct: 146 GRDCIGGSRTGSGKTVAFAAPILQ---KWAEDPFGI---FAVILTPTRELALQIFEQIKA 199
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS---LGTLKYL 125
+ + SL+ ++ GG +M Q +AL +RPHIV+ATPGRL DH+T++ + L + +
Sbjct: 200 ISAPQSLKPILITGGTEMRPQAIALSQRPHIVIATPGRLADHITSSGADTICGLNRTRVV 259
Query: 126 VLDEADRLLNDDFEKSLDEI---LNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKNP 177
V DEADRLL L ++ L+ +P RQT LF+AT+T +V+ L+ R K P
Sbjct: 260 VFDEADRLLASGPGSMLPDVETCLSALPPSTARQTLLFTATVTPEVRALKSMPRPANKLP 319
Query: 178 V---KIEAASKYSTVDTLKQQYRFVPAKYKDCYL-VYILTEV-SASSTMVFTRTCDATRL 232
+ ++ +K S TLKQ Y VP +++ +L I TE S ++F L
Sbjct: 320 IFVTEVSTENKASIPPTLKQTYLQVPLTHREAFLHTLISTEANSQKPAIIFCNRTKTADL 379
Query: 233 LALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINY 292
+ MLR LG R + + QS+R L++F+A IL+ TDVA+RGLDIPSV +VIN+
Sbjct: 380 VERMLRRLGHRVTSLHSLLPQSERTANLSRFRASAARILVATDVAARGLDIPSVSLVINF 439
Query: 293 DIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL 352
D+P N DY+HRVGRTARAGR G A++LV Q +++ L IE +G+K+ E+ +EE V +
Sbjct: 440 DVPRNPDDYVHRVGRTARAGREGEAVTLVGQRDVQLVLAIEDRVGRKMVEW--KEEGVSI 497
Query: 353 --------LLERVTEAKR 362
+L+ V EAKR
Sbjct: 498 EGRVVRGGILKEVGEAKR 515
>gi|452846401|gb|EME48333.1| hypothetical protein DOTSEDRAFT_76016 [Dothistroma septosporum
NZE10]
Length = 493
Score = 266 bits (681), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 164/398 (41%), Positives = 239/398 (60%), Gaps = 31/398 (7%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D IG ++TGSGKT AF +PILQ + R FA +++PTRELA+QI EQF+
Sbjct: 88 AGRDCIGGSRTGSGKTIAFGVPILQ------QWARQPSGIFALIMTPTRELALQIYEQFQ 141
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---Y 124
A+G ++C ++ GG DM QQ ++L +RPH+V+ATPGRL DH+ N+ ++ LK Y
Sbjct: 142 AIGGSQGVKCVLVTGGADMRQQAISLSQRPHVVIATPGRLADHIENSGEDTIQGLKKVKY 201
Query: 125 LVLDEADRLLNDDFEKSL----DEILNVIPR--MRQTYLFSATMTKKV---KKLQRACLK 175
+VLDEADRLL + S+ + L+ +P+ RQT LF+ATMT +V K++ RA +
Sbjct: 202 VVLDEADRLLASGGKGSMLPDVETCLDYLPQGSQRQTCLFTATMTPEVRALKEMPRAKGQ 261
Query: 176 NPVKIEAAS--KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVS--ASSTMVFTRTCDATR 231
PV + + DTL Q Y+ V +K+ YL +L+ + +T++F +
Sbjct: 262 QPVYVCEVDIDSLAIPDTLTQTYQLVNVLHKEKYLHVLLSTPANVEKTTIIFCNRTETAN 321
Query: 232 LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVIN 291
L+ +LR L R + + + R+ L +F+A IL+ TDVASRGLDIP V +VIN
Sbjct: 322 LVEYLLRLLEHRVTALHSGLQHTDRVNNLARFRARAARILVATDVASRGLDIPDVGLVIN 381
Query: 292 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAE----E 347
YD+P N DYIHRVGRTARAGR G +ISLV Q ++E IE+ +G+++ + E E
Sbjct: 382 YDLPRNPDDYIHRVGRTARAGRKGTSISLVGQRDVELVKAIEERVGREMVAYAEEKINVE 441
Query: 348 EEVLL-LLERVTEAKRISQMTIKDS----GNKRRRKGG 380
V+ L V + KR + + I++ GN+RR GG
Sbjct: 442 SRVIKEALNVVGDKKREAMLAIEEGRDVKGNRRRGFGG 479
>gi|296824810|ref|XP_002850715.1| ATP-dependent RNA helicase DBP8 [Arthroderma otae CBS 113480]
gi|238838269|gb|EEQ27931.1| ATP-dependent RNA helicase DBP8 [Arthroderma otae CBS 113480]
Length = 527
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 168/407 (41%), Positives = 246/407 (60%), Gaps = 32/407 (7%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA PIL E FA VL+PTRELA+QI EQ +A
Sbjct: 135 GRDCIGGSRTGSGKTVAFAAPILHKWSEDPF------GIFAVVLTPTRELALQIFEQIKA 188
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YL 125
+ + SL+ ++ GG DM Q + L +RPHIV+ATPGRL DH+ ++ ++ LK +
Sbjct: 189 ISAPQSLKPLLITGGSDMRPQAIGLSQRPHIVIATPGRLADHIKSSGEDTIVGLKRVRMV 248
Query: 126 VLDEADRLLNDDFEKSLDEI---LNVIPRM--RQTYLFSATMTKKVKKLQ---RACLKNP 177
VLDEADRLL+ L ++ L+ +P RQT LF+AT+T +V+ L+ RA + P
Sbjct: 249 VLDEADRLLSSGPGSMLPDVETCLSALPPSTNRQTLLFTATVTPEVRALKSMPRAKNRPP 308
Query: 178 VKI-EAASKYSTVD-TLKQQYRFVPAKYKDCYLVYILTEV--SASSTMVFTRTCDATRLL 233
+ + E +++ +T+ TLKQ Y VP +++ +L +L+ S+ ST++F LL
Sbjct: 309 IFVTEISTENTTIPPTLKQSYLQVPLNHREAFLHVLLSTEGNSSKSTIIFCNRTKTADLL 368
Query: 234 ALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYD 293
MLR L R + + QS+R+ L++F+A +L+ TDVA+RGLDIPSV +VIN+D
Sbjct: 369 ERMLRRLSHRVTSLHSLLPQSERVANLSRFRASAARLLVATDVAARGLDIPSVGLVINFD 428
Query: 294 IPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLL 353
+P N DYIHRVGRTARAGR G AI+LV Q +++ L IE +GK++ + EE V L
Sbjct: 429 VPRNPDDYIHRVGRTARAGREGEAITLVGQRDVQLVLAIEARVGKQMVAW--EEPGVNL- 485
Query: 354 LERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQ-FGINKKKLSK 399
E++ + +K+ G+ +R G+ D+ GR G +KL K
Sbjct: 486 -----ESRIVKSTVLKEVGSTKREAMGEIDE--GRDILGRRVRKLKK 525
>gi|170046083|ref|XP_001850610.1| ATP-dependent RNA helicase DBP8 [Culex quinquefasciatus]
gi|167868981|gb|EDS32364.1| ATP-dependent RNA helicase DBP8 [Culex quinquefasciatus]
Length = 516
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/379 (40%), Positives = 223/379 (58%), Gaps = 20/379 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT AFALPILQ L E + FA +L+PT ELA QI+EQF
Sbjct: 44 GQDCIGAAKTGSGKTFAFALPILQRLSEEPTSN------FALILTPTHELAYQIAEQFSV 97
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G + ++ V+ GG D + + L RPHIVVA PGRL HLT +S L++LV+D
Sbjct: 98 AGQPMGVKVCVVTGGTDQLLEAQRLQARPHIVVAMPGRLAAHLTGCNTYSFRALQFLVVD 157
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPV-----KIEAA 183
EADR+L+ F++ L+ I +P RQ FSAT+ K+ R P+ +
Sbjct: 158 EADRVLSGSFDEDLEAIKRFLPEKRQNLFFSATL----KEFMRESSVFPIAGGAFEWSEE 213
Query: 184 SKYSTVDTLKQQYRFVPAKYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRN 239
S+ +TV+TL Q+Y +D L+ L E ++ ++FT + ++L+L L
Sbjct: 214 SEVATVETLDQRYILCADYDRDMVLIETLRKFKEEKEDANVIIFTNSKKDCQVLSLTLNK 273
Query: 240 LGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSK 299
+G + + G + Q +R+ ALN+FK+ ILI TDVASRGLDIP+V +V+N+ +P
Sbjct: 274 IGFDNVCLHGFLRQKERVAALNRFKSKHVRILIATDVASRGLDIPNVQLVLNHRLPKVPN 333
Query: 300 DYIHRVGRTARAGRTGVAISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVT 358
+YIHRVGRTARAGR G+AIS+ +LE+ +IE LI KL E P ++ V + +V+
Sbjct: 334 EYIHRVGRTARAGRKGLAISIFRFPRDLEFLGEIEALINTKLTEHPVDQRLVERIFMQVS 393
Query: 359 EAKRISQMTIKDSGNKRRR 377
A+R ++M + + RR
Sbjct: 394 VARREAEMNLDNKDFDERR 412
>gi|148378643|ref|YP_001253184.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A str. ATCC
3502]
gi|153933936|ref|YP_001383027.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A str. ATCC
19397]
gi|153937665|ref|YP_001386574.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A str. Hall]
gi|148288127|emb|CAL82195.1| putative ATP-dependent RNA helicase rhle [Clostridium botulinum A
str. ATCC 3502]
gi|152929980|gb|ABS35480.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A str. ATCC
19397]
gi|152933579|gb|ABS39078.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A str. Hall]
Length = 425
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 155/379 (40%), Positives = 230/379 (60%), Gaps = 15/379 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLE---IAENQRTVPAFFACVLSPTRELAIQISEQ 65
G+DL+G AQTG+GKT AFA+P+LQ L + + +N RT+ A VL+PTRELAIQI E
Sbjct: 38 GRDLVGCAQTGTGKTAAFAVPVLQNLSKDKKVNKNPRTIRAL---VLAPTRELAIQIGES 94
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
FE G I+L+ AV+ GGV QT AL + I++ATPGR++D L N K L ++
Sbjct: 95 FECYGKYINLKSAVIFGGVSQNPQTKALREGVDILIATPGRMLD-LFNQKYIDLRNIECF 153
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ + +I++ +P+ RQ LFSATM ++ KL + +K+P+++E
Sbjct: 154 VLDEADRMLDMGMIHDVKKIISKLPKARQNLLFSATMPSEITKLVDSIVKDPIRVEVTPV 213
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
STVDT+ Q+ V K K L ++L + S S +VF+ T ++A L G A
Sbjct: 214 SSTVDTITQEVYHVRKKQKRALLKHLLKDKSIESALVFSTTKRGANMIAKDLVEAGIEAE 273
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G+ SQ+ R ALN FK G+ +L+ TD+A+RG+D+ + V NY++P + Y+HR+
Sbjct: 274 AIHGNKSQNARQRALNNFKEGKIRVLVATDIAARGIDVNELSHVFNYNLPDIPETYVHRI 333
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
GRT RAG GVAIS + E + IEKLI K++P E+ + + E + I +
Sbjct: 334 GRTGRAGAKGVAISFCDIEETKSLKAIEKLINKEIPVV----EDHPYKIRHINEGE-IKK 388
Query: 366 MTIKDSGNKR---RRKGGD 381
KD+ N++ +R+GG+
Sbjct: 389 ENTKDNFNEKSSTKRQGGN 407
>gi|254580331|ref|XP_002496151.1| ZYRO0C11660p [Zygosaccharomyces rouxii]
gi|238939042|emb|CAR27218.1| ZYRO0C11660p [Zygosaccharomyces rouxii]
Length = 435
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 157/375 (41%), Positives = 225/375 (60%), Gaps = 20/375 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT AF P+L E F VL+PTRELA+QI+EQF A
Sbjct: 44 GRDCIGGAKTGSGKTIAFGAPMLTKWSE------DPCGMFGVVLTPTRELAMQIAEQFTA 97
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYL 125
LGS +++R +++VGG D+++Q L L ++PH ++ATPGRL H+ N+ ++G L K+L
Sbjct: 98 LGSNMNIRVSIIVGGEDIVKQGLELQRKPHFIIATPGRLAHHILNSGDDTVGGLIRTKFL 157
Query: 126 VLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACL--KNPV--- 178
VLDEAD LL F K L + +P RQT LF+AT+T +V+ L+ A K P+
Sbjct: 158 VLDEADSLLTGTFAKDLAICIGALPPKNKRQTLLFTATVTDQVRALENAPSEGKPPLFTY 217
Query: 179 KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLALM 236
++ + K + +LK +Y VP K+ YL +LT + S+ MVF A +L
Sbjct: 218 EVASMDKVAIPSSLKTEYILVPEYVKEAYLYQLLTCEDYKDSTAMVFVNRTMAAEILRRT 277
Query: 237 LRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPT 296
L +G R + M Q +R +L++F+A +LI TDVASRGLDIP+V +V+NYDIP+
Sbjct: 278 LYAMGVRVTSLHSQMPQQERTNSLHRFRANAARVLIATDVASRGLDIPTVQLVVNYDIPS 337
Query: 297 NSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLL--L 354
+ +IHR GRTARAGR G AIS + Q ++ IE+ I KK+ E + ++ L
Sbjct: 338 DPDVFIHRSGRTARAGRRGDAISFITQRDISRIQAIEERINKKMGECDKVHDTAVIRKSL 397
Query: 355 ERVTEAKRISQMTIK 369
VT+AKR S M ++
Sbjct: 398 NSVTKAKRESLMAME 412
>gi|326315975|ref|YP_004233647.1| DEAD/DEAH box helicase domain-containing protein [Acidovorax avenae
subsp. avenae ATCC 19860]
gi|323372811|gb|ADX45080.1| DEAD/DEAH box helicase domain protein [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 491
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 207/335 (61%), Gaps = 5/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF+LP+LQ LL+ EN T PA A VL PTRELA Q+++Q
Sbjct: 40 GQDVMGAAQTGTGKTAAFSLPLLQRLLK-HENSSTSPARHPVRALVLLPTRELADQVAQQ 98
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
LR V+ GG+DM QTL L K ++VATPGRL+DH+ K L ++Y+
Sbjct: 99 IALYAKYTKLRSTVVFGGMDMKPQTLELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYV 157
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L+NPV IE A
Sbjct: 158 VLDEADRMLDIGFLPDLQRILSYLPKTRTTLLFSATFSPEIKRLAGSYLQNPVTIEVARP 217
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
T T++Q++ V K + ++L VF + L+ L G +A
Sbjct: 218 NETASTVEQRFYSVNDDDKRRAIHHVLRTRGVKQAFVFVNSKLGCARLSRTLEREGLKAA 277
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL+ FK GE ++L+CTDVA+RGLDI V V N+D+P N++DY+HR+
Sbjct: 278 ALHGDKSQDERLKALDAFKRGEVDLLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRI 337
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
GRT RAG +G+A++LV+ + IEKL KK+
Sbjct: 338 GRTGRAGASGLAVTLVSSSDARLVADIEKLTKKKI 372
>gi|226947893|ref|YP_002802984.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A2 str.
Kyoto]
gi|226840806|gb|ACO83472.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A2 str.
Kyoto]
Length = 425
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 156/379 (41%), Positives = 227/379 (59%), Gaps = 15/379 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLE---IAENQRTVPAFFACVLSPTRELAIQISEQ 65
GKDL+G AQTG+GKT AFA+PILQ L + + +N RT+ A VL+PTRELAIQI E
Sbjct: 38 GKDLVGCAQTGTGKTAAFAVPILQNLSKDKKVNKNPRTIRAL---VLAPTRELAIQIGES 94
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
FE G I+L+ AV+ GGV QT AL + I++ATPGR++D L N K L ++
Sbjct: 95 FECYGKYINLKSAVIFGGVSQNPQTKALREGVDILIATPGRMLD-LFNQKYIDLRNIECF 153
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ + +I++ +PR RQ LFSATM ++ KL + +K+P+++E
Sbjct: 154 VLDEADRMLDMGMIHDVKKIISKLPRGRQNLLFSATMPSEITKLVDSIVKDPIRVEVTPV 213
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
STVDT+ Q+ V K K L ++L + S S +VF+ T ++A L G A
Sbjct: 214 SSTVDTITQEVYHVRKKQKRSLLKHLLKDESIESALVFSTTKRGANMIAKDLVEAGIEAE 273
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G+ SQ+ R ALN FK G+ +L+ TD+A+RG+D+ + V NY++P + Y+HR+
Sbjct: 274 AIHGNKSQNARQRALNNFKEGKIRVLVATDIAARGIDVNELSHVFNYNLPDVPETYVHRI 333
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
GRT RAG GVAIS + E + IEKLI K++P ++ R + +
Sbjct: 334 GRTGRAGAKGVAISFCDIEETKSLKAIEKLIHKEIPVVEDHPYKI-----RHINEDEVKK 388
Query: 366 MTIKDSGNKR---RRKGGD 381
K++ NK+ +R+GG+
Sbjct: 389 ENTKNNYNKKPSSKRQGGN 407
>gi|120609836|ref|YP_969514.1| DEAD/DEAH box helicase [Acidovorax citrulli AAC00-1]
gi|120588300|gb|ABM31740.1| DEAD/DEAH box helicase domain protein [Acidovorax citrulli AAC00-1]
Length = 489
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 207/335 (61%), Gaps = 5/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF+LP+LQ LL+ EN T PA A VL PTRELA Q+++Q
Sbjct: 40 GQDVMGAAQTGTGKTAAFSLPLLQRLLK-HENSSTSPARHPVRALVLLPTRELADQVAQQ 98
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
LR V+ GG+DM QTL L K ++VATPGRL+DH+ K L ++Y+
Sbjct: 99 IALYAKYTKLRSTVVFGGMDMKPQTLELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYV 157
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L+NPV IE A
Sbjct: 158 VLDEADRMLDIGFLPDLQRILSYLPKTRTTLLFSATFSPEIKRLAGSYLQNPVTIEVARP 217
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
T T++Q++ V K + ++L VF + L+ L G +A
Sbjct: 218 NETASTVEQRFYSVNDDDKRRAIHHVLRTRGVKQAFVFVNSKLGCARLSRTLEREGLKAA 277
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL+ FK GE ++L+CTDVA+RGLDI V V N+D+P N++DY+HR+
Sbjct: 278 ALHGDKSQDERLKALDAFKRGEVDLLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRI 337
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
GRT RAG +G+A++LV+ + IEKL KK+
Sbjct: 338 GRTGRAGASGLAVTLVSSSDARLVADIEKLTKKKI 372
>gi|375145001|ref|YP_005007442.1| DEAD/DEAH box helicase [Niastella koreensis GR20-10]
gi|361059047|gb|AEV98038.1| DEAD/DEAH box helicase domain protein [Niastella koreensis GR20-10]
Length = 419
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/333 (42%), Positives = 201/333 (60%), Gaps = 2/333 (0%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVP-AFFACVLSPTRELAIQISEQFEA 68
KDL G A+TG+GKT AFA+P+LQ L E + + A +L+PTRELAIQI E +A
Sbjct: 39 KDLFGCARTGTGKTAAFAIPVLQILHEQKQAAKAPDNTIKALILTPTRELAIQIKESLDA 98
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G LR AV+ GGV Q L + I+VATPGRL+D L + + +LG+++ L+LD
Sbjct: 99 YGKFTGLRHAVIFGGVSQQAQVTTLRRGVDILVATPGRLLD-LIDQRFVNLGSIRLLILD 157
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F + +I+ +P+ RQT FSATM +++L L NPV IE ST
Sbjct: 158 EADRMLDMGFVHDVKKIMAKVPKQRQTLFFSATMAPAIRQLANTLLTNPVSIEVTPVSST 217
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
+T++Q FVP K L ++L + +VFTRT +A L N G A I
Sbjct: 218 AETVRQAVYFVPKTSKQSLLKHLLADTDIPMALVFTRTKHGADRVAKELNNFGISAAAIH 277
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ R AL KF++ + +L+ TD+A+RG+DI + VINYD+P ++ Y+HR+GRT
Sbjct: 278 GNKSQQARQTALLKFRSRQIQVLVATDIAARGIDIDELSHVINYDLPEVAETYVHRIGRT 337
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
RAG G+A+S +Q E + IEKLI K +P
Sbjct: 338 GRAGANGMAVSFCDQEEKAYLRDIEKLIKKSVP 370
>gi|346327204|gb|EGX96800.1| ATP dependent RNA helicase (Dbp8) [Cordyceps militaris CM01]
Length = 575
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 166/397 (41%), Positives = 238/397 (59%), Gaps = 37/397 (9%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA+P+LQ E A F VL+PTRELA+QI EQF A
Sbjct: 180 GRDCIGGSRTGSGKTVAFAVPMLQRWAEDPT------AIFGLVLTPTRELALQIYEQFRA 233
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YL 125
+ + SL+ ++ GG DM Q +AL +RPH+V+ATPGRL DH+ + ++G L+ Y+
Sbjct: 234 IAAPQSLKVLLITGGADMRPQAIALRQRPHVVIATPGRLADHVRTSGEDTVGGLRRVRYV 293
Query: 126 VLDEADRLLN---------DDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLK- 175
VLDEADRLL+ D E+ L + P RQT LF+ATMT +V+ L +K
Sbjct: 294 VLDEADRLLHAGAGPGSMLPDVEQCLAALPP--PTERQTLLFTATMTPEVRALAAMPVKP 351
Query: 176 --NPVKI--EAASKYSTVDTLKQQYRFVPAKYKDCYL-VYILTEVSASSTMVF--TRTCD 228
PV + + + TL+Q++ +P +K+ YL +++LTE + T++ RT
Sbjct: 352 GKQPVFVCEVDTQRLAIPATLRQRHLQIPVTHKEHYLHMFLLTEANVDKTIILFCNRTAT 411
Query: 229 ATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDM 288
A L MLR L R + + Q +R+ L +F+A ILI TDVA+RGLDIP V +
Sbjct: 412 AD-FLHHMLRLLDHRVTSLHSKLPQRQRVDNLARFRASAARILIATDVAARGLDIPEVSL 470
Query: 289 VINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAE-- 346
VINYD+P + DYIHRVGRTARAGR G A++LV Q ++E L IE+ +G+++ + +
Sbjct: 471 VINYDVPRDPDDYIHRVGRTARAGRDGEAVTLVGQRDVELVLAIEERVGREMEAWAEDGV 530
Query: 347 --EEEVLL-LLERVTEAKRISQMTI---KDSGNKRRR 377
E VL L+ V+E KR + + + K+ G KR+R
Sbjct: 531 NLETRVLREALKTVSEKKREALLEVEENKEVGGKRKR 567
>gi|187479233|ref|YP_787258.1| ATP-dependent RNA helicase [Bordetella avium 197N]
gi|115423820|emb|CAJ50371.1| putative ATP-dependent RNA helicase [Bordetella avium 197N]
Length = 477
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/345 (43%), Positives = 213/345 (61%), Gaps = 9/345 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF LPIL L+ +A N PA A +L+PTRELA Q+ E
Sbjct: 52 GRDVMGAAQTGTGKTAAFTLPILHRLMPLA-NSSASPARHPVRALILTPTRELADQVYEN 110
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+ LR AV+ GGVD+ Q AL + ++VATPGRL+DH+ K +L + L
Sbjct: 111 VKRYSLHTPLRSAVVFGGVDIGPQKEALRQGCEVLVATPGRLLDHVEQ-KNVNLSQVGIL 169
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L+ I+ ++P RQ LFSAT + +++KL R+ L PV+IE A++
Sbjct: 170 VLDEADRMLDMGFLPDLERIIRLLPPQRQGLLFSATFSNEIRKLGRSYLNQPVEIEVAAR 229
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T DT+ Q + + K +V+++ +VF+ T T LA L G +A
Sbjct: 230 NATADTVTQIAYQMTGEAKRAAVVHLVKSRGLKQVIVFSNTKIGTARLARQLELDGVKAE 289
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G SQ+ R+ AL FKAGE +L+ TDVA+RGLD+ V VINYD+P N++DY+HR+
Sbjct: 290 SIHGDKSQADRMKALEAFKAGELEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRI 349
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP----EFPAE 346
GRT RAG +G AI+L E + L IEKLI +++P + P+E
Sbjct: 350 GRTGRAGASGEAIALFTPEEERYLLDIEKLIKRQVPRGKLDIPSE 394
>gi|170759986|ref|YP_001785987.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A3 str. Loch
Maree]
gi|169406975|gb|ACA55386.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A3 str. Loch
Maree]
Length = 425
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 153/376 (40%), Positives = 226/376 (60%), Gaps = 9/376 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DL+G AQTG+GKT AFA+P+LQ L + + + A VL+PTRELAIQI E FE
Sbjct: 38 GRDLVGCAQTGTGKTAAFAVPVLQNLSKDKKVNKDPRTIRALVLAPTRELAIQIGESFEC 97
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G I+L+ AV+ GGV QT AL + I++ATPGR++D L N K L ++ VLD
Sbjct: 98 YGKYINLKSAVIFGGVSQNPQTKALREGVDILIATPGRMLD-LFNQKYIDLRNIECFVLD 156
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ + +I++ +P+ RQ LFSATM ++ KL + +K+P+++E ST
Sbjct: 157 EADRMLDMGMIHDVKKIISKLPKARQNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSST 216
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDT+ Q+ V K K L ++L + S S +VF+ T ++A L G A I
Sbjct: 217 VDTITQEVYHVRKKQKRALLKHLLKDKSIESALVFSTTKRGANMIAKDLVEAGIEAEAIH 276
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ+ R ALN FK G+ +L+ TD+A+RG+D+ + V NY++P + Y+HR+GRT
Sbjct: 277 GNKSQNARQRALNNFKEGKIRVLVATDIAARGIDVNELSHVFNYNLPDIPETYVHRIGRT 336
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
RAG GVAIS + E + IEKLI K++P E+ + + E + I +
Sbjct: 337 GRAGAKGVAISFCDIEETKSLKAIEKLINKEIPVV----EDHPYKIRHINEGE-IKKENT 391
Query: 369 KDSGNKR---RRKGGD 381
KD+ NK+ +R+GG+
Sbjct: 392 KDNFNKKSSTKRQGGN 407
>gi|153939895|ref|YP_001390000.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum F str.
Langeland]
gi|384461069|ref|YP_005673664.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum F str.
230613]
gi|152935791|gb|ABS41289.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum F str.
Langeland]
gi|295318086|gb|ADF98463.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum F str.
230613]
Length = 425
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/375 (40%), Positives = 224/375 (59%), Gaps = 7/375 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDL+G AQTG+GKT AFA+P+LQ L + + + A VL+PTRELAIQI+E FE
Sbjct: 38 GKDLVGCAQTGTGKTAAFAVPVLQNLSKDKKANKNPRPIRALVLAPTRELAIQIAESFEC 97
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G I+L+ AV+ GGV QT L + I++ATPGR++D L N K L ++ VLD
Sbjct: 98 YGKYINLKSAVIFGGVSQNPQTKVLREGVDILIATPGRMLD-LFNQKYIDLRNIECFVLD 156
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ + +I++ +P++RQ LFSATM ++ KL + +K+P+++E ST
Sbjct: 157 EADRMLDMGMIHDVKKIISKLPKVRQNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSST 216
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDT+ Q+ V K K L ++L + S S +VF+ T ++A L G A I
Sbjct: 217 VDTITQEVYHVRKKQKRALLKHLLKDKSIESALVFSTTKRGANMIAKDLVEAGIEAEAIH 276
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ+ R ALN FK G+ +L+ TD+A+RG+D+ + V NY++P + Y+HR+GRT
Sbjct: 277 GNKSQNARQRALNNFKEGKIRVLVATDIAARGIDVNELSHVFNYNLPDVPETYVHRIGRT 336
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
RAG GVAIS + E + IEKLI K++P EE + + E + + T
Sbjct: 337 GRAGAKGVAISFCDIEETKSLKAIEKLINKEIPVV----EEHPYKIRHINEDEVKKENTN 392
Query: 369 KDSGNK--RRRKGGD 381
+S K +R+GG+
Sbjct: 393 NNSNKKPSSKRQGGN 407
>gi|312370822|gb|EFR19136.1| hypothetical protein AND_23001 [Anopheles darlingi]
Length = 485
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 155/376 (41%), Positives = 222/376 (59%), Gaps = 12/376 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT AFALPILQ L E A FA VL+PT ELA QI+EQF
Sbjct: 11 GQDCIGAAKTGSGKTFAFALPILQKLSE------EPTANFALVLTPTHELAHQIAEQFIV 64
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G ++ R V+ GG D + + L RPHI+VA PGRL DHL +S L++LV+D
Sbjct: 65 AGQPMNARVCVVTGGTDQLLEAQKLQSRPHIIVAMPGRLADHLNGCNTYSFAALQFLVVD 124
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVK-KLQRACLKNPVKIEAASKYS 187
EADR+L+ F+ L I +P RQ FSATM +K + ++ + S+ +
Sbjct: 125 EADRVLSGSFDDDLRVIDRFLPAKRQNLFFSATMKDFLKTSIVFPIAQDVFEWSEQSEVA 184
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLRNLGQR 243
TV+TL Q+Y +D L L E +S M+FT + ++L++ L ++G
Sbjct: 185 TVETLDQRYILCADYDRDMVLTEALRKFKEENEDASVMIFTNSKKDCQVLSMTLSSIGFD 244
Query: 244 AIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIH 303
+ + G M Q +R+ ALN+FK+ ILI TDVASRGLDIP V +V+N+ +P +YIH
Sbjct: 245 NVCLHGFMRQKERVAALNRFKSKHVRILIATDVASRGLDIPDVQLVLNHRLPKMPNEYIH 304
Query: 304 RVGRTARAGRTGVAISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
RVGRTARAGR+G+AIS+ +LE+ +IE LI KL E ++ V + +V+ A+R
Sbjct: 305 RVGRTARAGRSGMAISIFRFPRDLEFLGEIEALINTKLTEHQIDQRLVERIFMQVSVARR 364
Query: 363 ISQMTIKDSGNKRRRK 378
++M++ + R++
Sbjct: 365 EAEMSLNNEDFDERQQ 380
>gi|422322840|ref|ZP_16403880.1| ATP-dependent RNA helicase [Achromobacter xylosoxidans C54]
gi|317402151|gb|EFV82742.1| ATP-dependent RNA helicase [Achromobacter xylosoxidans C54]
Length = 481
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/345 (43%), Positives = 213/345 (61%), Gaps = 9/345 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF LPIL L+ +A N PA A +L+PTRELA Q+ E
Sbjct: 55 GRDVMGAAQTGTGKTAAFTLPILHRLMPLA-NTSASPARHPVRALILTPTRELADQVYES 113
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+ LR AV+ GGVD+ Q AL + ++VATPGRL+DH+ K +L + L
Sbjct: 114 VKRYSKQTPLRSAVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHVEQ-KNVNLSQVGIL 172
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L+ I+ ++P RQ LFSAT + +++KL R+ L +PV+IE A++
Sbjct: 173 VLDEADRMLDMGFLPDLERIIRLLPAQRQGLLFSATFSNEIRKLGRSYLNHPVEIEVAAR 232
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T +T+ Q + K +V+++ +VF+ T T LA L G +A
Sbjct: 233 NATANTITQIAYKMSGDQKRAAVVHLVKSRGLKQVIVFSNTKIGTARLARELERDGVKAE 292
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G +Q+ R+ AL FKAGE +L+ TDVA+RGLD+ V VINYD+P N++DY+HR+
Sbjct: 293 SIHGDKTQADRMKALEAFKAGELEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRI 352
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP----EFPAE 346
GRT RAG TG AI+L E + L IEKLI +++P + PAE
Sbjct: 353 GRTGRAGATGEAIALFTADEERFLLDIEKLIKREVPRGTLDVPAE 397
>gi|119491751|ref|XP_001263370.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
gi|134034081|sp|A1D6X9.1|DBP8_NEOFI RecName: Full=ATP-dependent RNA helicase dbp8
gi|119411530|gb|EAW21473.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
Length = 526
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 167/408 (40%), Positives = 242/408 (59%), Gaps = 33/408 (8%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AF++P+LQ E F VL+PTRELA+QI EQ +A
Sbjct: 133 GRDCIGGSRTGSGKTIAFSVPMLQKWAEDPF------GIFGVVLTPTRELALQIFEQIKA 186
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YL 125
+ + S++ ++ GG DM Q +AL RPH+V+ATPGRL DH+ ++ ++ LK +
Sbjct: 187 ISAPQSMKPVLITGGTDMRPQAIALAGRPHVVIATPGRLADHIKSSGEDTVCGLKRVRMV 246
Query: 126 VLDEADRLLNDDFEKSLDEI---LNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKNP 177
VLDEADRLL L ++ L+ +P RQT LF+AT+T +V+ L+ R+ K P
Sbjct: 247 VLDEADRLLASGPGSMLPDVETCLSALPPSSERQTLLFTATVTPEVRALKNMPRSANKPP 306
Query: 178 V---KIEAASKYSTVDTLKQQYRFVPAKYKDCYL-VYILTEVSAS-STMVFTRTCDATRL 232
V +I ++ S TLKQ Y VP +++ +L V + TE +AS ++F L
Sbjct: 307 VFVTEISTENQGSIPPTLKQTYLKVPLTHREAFLHVLLSTEDNASRPAIIFCNHTKTADL 366
Query: 233 LALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINY 292
L MLR L R + + QS+R L +F+A IL+ TDVASRGLDIP+V +VINY
Sbjct: 367 LERMLRRLTHRVTSLHSLLPQSERNANLARFRASAARILVATDVASRGLDIPTVSLVINY 426
Query: 293 DIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL 352
D+P N DY+HRVGRTARAGR+G AI+LV Q +++ L IE+ +G+++ E+ EE V +
Sbjct: 427 DVPRNPDDYVHRVGRTARAGRSGEAITLVGQRDVQLVLAIEERVGRQMEEW--SEEGVSI 484
Query: 353 LLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQ-FGINKKKLSK 399
E + + +K+ G +R G+ D+ GR G + KL K
Sbjct: 485 ------EGRLVRTGVLKEVGEAKREAMGEIDE--GRDVLGRKRNKLKK 524
>gi|145232875|ref|XP_001399810.1| ATP-dependent RNA helicase dbp8 [Aspergillus niger CBS 513.88]
gi|152013493|sp|A5AA68.1|DBP8_ASPNC RecName: Full=ATP-dependent RNA helicase dbp8
gi|134056731|emb|CAK44220.1| unnamed protein product [Aspergillus niger]
gi|350634649|gb|EHA23011.1| hypothetical protein ASPNIDRAFT_37042 [Aspergillus niger ATCC 1015]
Length = 522
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 162/409 (39%), Positives = 238/409 (58%), Gaps = 35/409 (8%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AF++P+LQ E F VL+PTRELA+QI EQ +A
Sbjct: 129 GRDCIGGSRTGSGKTIAFSVPMLQKWAEDPF------GIFGLVLTPTRELALQIYEQIKA 182
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS----LGTLKY 124
+ + S++ ++ GG DM Q +AL +RPH+V+ATPGRL DH+ NT G L ++
Sbjct: 183 ISAPQSMKPLLITGGTDMRPQAVALAQRPHVVIATPGRLADHI-NTSGSDTIRGLKRVRM 241
Query: 125 LVLDEADRLLNDDFEKSLDEI---LNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKN 176
+VLDEADRLL L ++ L+ +P RQT LF+AT+T +V+ L+ R K
Sbjct: 242 VVLDEADRLLAPGHGSMLPDVETCLSALPPSSERQTLLFTATLTPEVRALKSMPRPSTKP 301
Query: 177 PV---KIEAASKYSTVDTLKQQYRFVPAKYKDCYL-VYILTEVSAS-STMVFTRTCDATR 231
P+ +I + S TLKQ Y VP +++ +L V + TE +AS ++F
Sbjct: 302 PIFVTEISTENNASIPPTLKQTYLKVPMTHREAFLHVLLSTEANASKPAIIFCNHTKTAD 361
Query: 232 LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVIN 291
LL MLR L R + + QS+R L +F+A +L+ TDVASRGLDIPSV++V+N
Sbjct: 362 LLERMLRRLSHRVTSLHSLLPQSERNANLARFRASAARLLVATDVASRGLDIPSVELVVN 421
Query: 292 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 351
+D+P N DY+HRVGRTARAGR G +++LV Q ++ L IE+ +G+++ E+ E V
Sbjct: 422 FDVPRNPDDYVHRVGRTARAGRKGESVTLVGQRDVSLVLAIEERVGRQMEEWSEEGVSV- 480
Query: 352 LLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQ-FGINKKKLSK 399
E + + +K+ G +R G+ ++ GR G + KL K
Sbjct: 481 -------EGRVVRTGVLKEVGEAKREAAGEIEE--GRDVLGRKRNKLKK 520
>gi|388567718|ref|ZP_10154148.1| DEAD/DEAH box helicase domain protein [Hydrogenophaga sp. PBC]
gi|388265047|gb|EIK90607.1| DEAD/DEAH box helicase domain protein [Hydrogenophaga sp. PBC]
Length = 482
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 207/335 (61%), Gaps = 5/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF+LP+LQ LL+ EN T PA A VL PTRELA Q++EQ
Sbjct: 40 GRDVMGAAQTGTGKTAAFSLPLLQRLLK-HENASTSPARHPVRALVLLPTRELADQVAEQ 98
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+ LR V+ GG+DM QTL L K ++VATPGRL+DH+ K L ++Y+
Sbjct: 99 VKLYAKYTQLRSTVVFGGMDMKPQTLELKKGVEVLVATPGRLLDHI-EAKNCVLNQVEYV 157
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L++P+ +E A
Sbjct: 158 VLDEADRMLDIGFLPDLQRILSYLPKQRTTLLFSATFSPEIKRLANSYLQDPITVEVARS 217
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T T++Q + V K L IL + VF + LA L G
Sbjct: 218 NATASTVEQHFYRVDDDDKRGTLRQILRDRGLKQAFVFVNSKLGCARLARSLERDGLNTA 277
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL+ FK G ++L+CTDVA+RGLDI V V N+DIP N++DY+HR+
Sbjct: 278 ALHGDKSQDERLKALDAFKQGNVDLLVCTDVAARGLDIKDVPAVFNFDIPFNAEDYVHRI 337
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
GRT RAG +G+A+S V+ + ++EKL+GKKL
Sbjct: 338 GRTGRAGASGLAVSFVSGRDARLVGELEKLLGKKL 372
>gi|150390712|ref|YP_001320761.1| DEAD/DEAH box helicase [Alkaliphilus metalliredigens QYMF]
gi|149950574|gb|ABR49102.1| DEAD/DEAH box helicase domain protein [Alkaliphilus metalliredigens
QYMF]
Length = 433
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/374 (41%), Positives = 213/374 (56%), Gaps = 8/374 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G DL+G AQTG+GKT AFA+PILQ L N + A +L+PTRELAIQI++ FE
Sbjct: 38 GMDLLGCAQTGTGKTAAFAIPILQGLSSEQRNLKGSRQIQALILAPTRELAIQIADSFET 97
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G + LR V+ GGV QT +L + I+VATPGRL+D L N K L ++KY VLD
Sbjct: 98 YGKHLGLRTLVIYGGVSQHPQTKSLNRGIDILVATPGRLLD-LINQKFVRLNSIKYFVLD 156
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD +L+ + I+ IP +RQT FSATM ++ KL LK PVK+E ST
Sbjct: 157 EADMMLDMGMIHDVRRIIKYIPAVRQTMFFSATMPAEIAKLADQILKEPVKVEITPVSST 216
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD ++Q +V K L+++L + S +VF+RT + L G +A I
Sbjct: 217 VDIIEQAVYYVNKSNKVQLLIHLLKSKAIVSALVFSRTKHGADKIVKSLEKAGLQAQAIH 276
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ+ R ALN FK + IL+ TD+A+RG+D+ + VIN+D+P + Y+HR+GRT
Sbjct: 277 GNKSQNARQLALNNFKERKTRILVATDIAARGIDVEELSHVINFDLPEVPETYVHRIGRT 336
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRI----S 364
RAG G+AIS Q E +I+KLI K + P E+ L+E + E+K + S
Sbjct: 337 GRAGLGGIAISFCAQEEKNLLKEIQKLISKSV---PVVEDHPFPLVETLNESKEVFTRKS 393
Query: 365 QMTIKDSGNKRRRK 378
N RR K
Sbjct: 394 SAPKTTPANNRRNK 407
>gi|440748527|ref|ZP_20927779.1| ATP-dependent RNA helicase RhlE [Mariniradius saccharolyticus AK6]
gi|436483035|gb|ELP39111.1| ATP-dependent RNA helicase RhlE [Mariniradius saccharolyticus AK6]
Length = 410
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/370 (40%), Positives = 216/370 (58%), Gaps = 5/370 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DL+G AQTG+GKT AFA+PI+Q L AE ++ P A +L+PTRELAIQI E F A
Sbjct: 38 GRDLLGCAQTGTGKTAAFAIPIIQHL---AEKKQHRPGIKALILTPTRELAIQIDESFAA 94
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G + V+ GGV + Q AL + ++VATPGRL+D L K L L+ VLD
Sbjct: 95 YGRFAKISHTVIFGGVSQLHQVNALKRGVDVLVATPGRLLD-LIGQKYIDLSKLEIFVLD 153
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F + +++ ++P RQT FSATM +++KL + L +P +E ST
Sbjct: 154 EADRMLDMGFIHDVKKVIALLPSKRQTLFFSATMPPEIQKLADSLLTHPALVEVTPPSST 213
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD ++Q+ + K L+Y+L E S +VFTRT + +L+ + I
Sbjct: 214 VDKIEQRLYYTNKGDKPALLLYLLQEKKIGSALVFTRTKHGADKVVKLLQREKVKCAAIH 273
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ+ R ALN FK+G+ +L+ TD+A+RG+DI + V NYD+P + Y+HR+GRT
Sbjct: 274 GNKSQNNRQNALNDFKSGKLQVLVATDIAARGIDIDELANVFNYDLPNIPETYVHRIGRT 333
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
RAG +G+A+S V+ L+ IEKLIGKK+P ++ T AK +Q
Sbjct: 334 GRAGNSGLAMSFVDGETLKELKDIEKLIGKKIPVIEDHPFPFTGVVPEPTPAKP-AQKPA 392
Query: 369 KDSGNKRRRK 378
SGN+ K
Sbjct: 393 SQSGNRSSDK 402
>gi|423015941|ref|ZP_17006662.1| putative ATP-dependent RNA helicase [Achromobacter xylosoxidans
AXX-A]
gi|338781000|gb|EGP45396.1| putative ATP-dependent RNA helicase [Achromobacter xylosoxidans
AXX-A]
Length = 457
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/345 (43%), Positives = 212/345 (61%), Gaps = 9/345 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF LPIL L+ +A N PA A +L+PTRELA Q+ E
Sbjct: 26 GRDVMGAAQTGTGKTAAFTLPILHRLMPLA-NTSASPARHPVRALILTPTRELADQVYES 84
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+ LR AV+ GGVD+ Q AL + ++VATPGRL+DH+ K +L + L
Sbjct: 85 VKRYSKQTPLRSAVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHVEQ-KNVNLSQVGIL 143
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L+ I+ ++P RQ LFSAT + +++KL R+ L PV+IE A++
Sbjct: 144 VLDEADRMLDMGFLPDLERIIRLLPAQRQGLLFSATFSNEIRKLGRSYLNQPVEIEVAAR 203
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T +T+ Q + K +V+++ +VF+ T T LA L G +A
Sbjct: 204 NATANTITQIAYKMSGDQKRAAVVHLVKSRGLKQVIVFSNTKIGTARLARELERDGVKAE 263
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G +Q+ R+ AL FKAGE +L+ TDVA+RGLD+ V VINYD+P N++DY+HR+
Sbjct: 264 SIHGDKTQADRMKALEAFKAGELEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRI 323
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP----EFPAE 346
GRT RAG TG AI+L E + L IEKLI +++P E PA+
Sbjct: 324 GRTGRAGATGEAIALFTGDEERFLLDIEKLIKREVPRGTLELPAD 368
>gi|168178014|ref|ZP_02612678.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum NCTC 2916]
gi|182671239|gb|EDT83213.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum NCTC 2916]
Length = 425
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 151/376 (40%), Positives = 226/376 (60%), Gaps = 9/376 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDL+G AQTG+GKT AFA+P+LQ L + + + A VL+PTRELAIQI E FE
Sbjct: 38 GKDLVGCAQTGTGKTAAFAVPVLQNLSKDKKANKNPKPIRALVLAPTRELAIQIGESFEC 97
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G I+L+ AV+ GGV QT L + I++ATPGR++D L N K L ++ VLD
Sbjct: 98 YGKYINLKSAVIFGGVSQNPQTKVLREGVDILIATPGRMLD-LFNQKYIDLRNIECFVLD 156
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ + +I++ +P++RQ LFSATM ++ KL + +K+P+++E ST
Sbjct: 157 EADRMLDMGMIHDVKKIISKLPKIRQNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSST 216
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDT+ Q+ V K K L ++L + S S +VF+ T ++A L G A I
Sbjct: 217 VDTITQEVYHVRKKQKRSLLKHLLRDKSIESALVFSTTKRGANMIAKDLVEAGIEAEAIH 276
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ+ R ALN FK G+ +L+ TD+A+RG+D+ + V NY++P + Y+HR+GRT
Sbjct: 277 GNKSQNARQRALNNFKEGKIRVLVATDIAARGIDVNELSHVFNYNLPDVPETYVHRIGRT 336
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
RAG GVAIS + E + IEKLI K++P E+ + + E + + +
Sbjct: 337 GRAGAKGVAISFCDIEETKSLKAIEKLINKEIPVV----EDHPYKIRHINEDE-VRKENT 391
Query: 369 KDSGNKR---RRKGGD 381
K++ NK+ +R+GG+
Sbjct: 392 KNNSNKKPSSKRQGGN 407
>gi|332285242|ref|YP_004417153.1| ATP-dependent RNA helicase [Pusillimonas sp. T7-7]
gi|330429195|gb|AEC20529.1| ATP-dependent RNA helicase [Pusillimonas sp. T7-7]
Length = 455
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/336 (44%), Positives = 206/336 (61%), Gaps = 5/336 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF LPIL L++ A N PA A +L+PTRELA Q+++
Sbjct: 49 GRDVMGAAQTGTGKTAAFTLPILHRLMQFA-NTSASPARHPVRALILTPTRELADQVADS 107
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
LR V+ GGVD+ Q AL + I++ATPGRL+DH+ K +L + L
Sbjct: 108 VTTYAKFTPLRSTVVFGGVDIGPQRDALRRGCEILIATPGRLLDHVEQ-KNVNLSQVGIL 166
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F LD I+ ++P RQ LFSAT + +++KL R+ L NP +IE A++
Sbjct: 167 VLDEADRMLDMGFLPDLDRIVRLLPAKRQGLLFSATFSNEIRKLGRSYLSNPAEIEVAAR 226
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T DT+ Q + K +V+++ + +VF+ T T LA L G +A
Sbjct: 227 NATADTVTQIAYPLAGSDKRAAVVHLVKSRGFNQVIVFSNTKIGTSRLARELVRDGVKAE 286
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G SQ R+ AL+ FKAGE +L+ TDVA+RGLD+ V VINYD+P N++DY+HR+
Sbjct: 287 SIHGDKSQLDRMKALDAFKAGELEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRI 346
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
GRT RAG TG AI+ E + L IEKLI K+P
Sbjct: 347 GRTGRAGNTGEAIAFFTPEEERYLLDIEKLIKAKIP 382
>gi|124265824|ref|YP_001019828.1| ATP-dependent RNA helicase 2 [Methylibium petroleiphilum PM1]
gi|124258599|gb|ABM93593.1| putative ATP-dependent RNA helicase 2 [Methylibium petroleiphilum
PM1]
Length = 494
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 144/336 (42%), Positives = 212/336 (63%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT AF+LP+LQ +L+ E+ T PA A VL+PTRELA Q++
Sbjct: 55 AGRDVMGAAQTGTGKTAAFSLPLLQKMLK-HESSSTSPARHPVRALVLAPTRELADQVAN 113
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
+ LR V+ GG+DM QT L + +++ATPGRL+DH+ K SL ++Y
Sbjct: 114 NVKTYSKHTQLRATVVFGGIDMKPQTAELKRGVEVLIATPGRLLDHI-EAKNCSLSQVEY 172
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
+VLDEADR+L+ F L IL+ +P+ RQT LFSAT + ++KKL + L++P+ +E A
Sbjct: 173 VVLDEADRMLDIGFLPDLQRILSYLPKSRQTLLFSATFSPEIKKLANSYLQDPILVETAR 232
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
+T T++Q++ V K + +L + + ++VF + LA G R
Sbjct: 233 PNATASTVEQRFYRVEDDDKRNAVKQLLRTRAITQSIVFVNSKLGAARLARAFERDGLRT 292
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
+ G SQ +RL AL FKAGE ++L+ TDVA+RGLDI + V N+D+P N++DY+HR
Sbjct: 293 QALHGDKSQDERLKALAAFKAGEVDLLVATDVAARGLDIADLPAVFNFDVPFNAEDYVHR 352
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG +G+AI+LV++ + IEKLI KKL
Sbjct: 353 IGRTGRAGASGLAITLVSRDDARLVSDIEKLIKKKL 388
>gi|337278667|ref|YP_004618138.1| ATP-dependent RNA helicase [Ramlibacter tataouinensis TTB310]
gi|334729743|gb|AEG92119.1| Candidate ATP-dependent RNA helicase [Ramlibacter tataouinensis
TTB310]
Length = 486
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 209/335 (62%), Gaps = 5/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF+LP+LQ LL+ EN T PA A VL PTRELA Q+++Q
Sbjct: 47 GRDVMGAAQTGTGKTAAFSLPLLQRLLK-HENSSTSPARHPVRALVLLPTRELADQVAQQ 105
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+ +LR AV+ GG+DM QTL L + ++VATPGRL+DH+ K LG ++Y+
Sbjct: 106 VKLYAKYTNLRSAVVFGGMDMKPQTLELKRGVEVLVATPGRLLDHI-EAKNAVLGQVEYV 164
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + LK+PV IE A
Sbjct: 165 VLDEADRMLDIGFLPDLQRILSYLPKQRTTLLFSATFSPEIKRLANSYLKDPVTIEVARP 224
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
T T++Q + V K L I+ + + VF + LA L G +
Sbjct: 225 NETASTVEQHFYSVTDDDKRRALKQIVRQRGITQAFVFVNSKLGCARLARSLEREGLKTT 284
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL FKAGE ++L+ TDVA+RGLDI V V N+D+P N++DY+HR+
Sbjct: 285 ALHGDKSQDERLKALAAFKAGEVDLLVATDVAARGLDIKDVPAVFNFDVPFNAEDYVHRI 344
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
GRT RAG +G+A++ V+ + +EKL+ KK+
Sbjct: 345 GRTGRAGASGLAVTFVSGSDGRLVADLEKLLKKKV 379
>gi|412987541|emb|CCO20376.1| predicted protein [Bathycoccus prasinos]
Length = 843
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 218/339 (64%), Gaps = 12/339 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+ G AQTGSGKT AFALP+L+ +L +N V A ++ PTRELA+Q ++ +
Sbjct: 247 GRDVCGRAQTGSGKTAAFALPLLERMLHRPKN--AVSAIHVVIMVPTRELAVQCAQMIQR 304
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG +++ A +VGG+ M +Q AL +RP IVVATPGRL+DH+ NT F + +VLD
Sbjct: 305 LGEYTNVQVATIVGGLSMERQAAALRQRPEIVVATPGRLIDHVRNTHSFGFEDVAAVVLD 364
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL F + + EI+ +PR RQT LFSAT+T V++L ++NP ++ A S +T
Sbjct: 365 EADRLLEMGFLEEIKEIVRNMPRQRQTLLFSATLTSAVEELASLSMRNPARLSADSLGTT 424
Query: 189 VDTLKQQYRFVPAKY---KDCYLVYILT-EVSASSTMVFTRT-CDATRL-LALMLRNLGQ 242
TL ++ + ++ K+ +L+ +L+ T+VF +T A RL + L L N+
Sbjct: 425 PMTLTEEIVKIKPQFVAKKEAHLLSLLSRSFKGKETIVFAKTKVQAHRLKIVLGLSNI-- 482
Query: 243 RAIPISGHMSQSKRLGALNKFKA-GECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+A + G M+Q++RL AL F++ E I++ TDVA+RGLDI SVD+V++YD P N Y
Sbjct: 483 KACELHGDMTQTQRLAALEDFRSNAETKIMVATDVAARGLDIASVDLVVSYDAPKNVASY 542
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+HRVGRTARAGR GVAI+ + +Y+ ++K G+KL
Sbjct: 543 LHRVGRTARAGRKGVAITFMEEYDRALVKTLQKR-GQKL 580
>gi|340786226|ref|YP_004751691.1| ATP-dependent RNA helicase [Collimonas fungivorans Ter331]
gi|340551493|gb|AEK60868.1| ATP-dependent RNA helicase [Collimonas fungivorans Ter331]
Length = 506
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 203/335 (60%), Gaps = 5/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT F+LPI+Q LL A N PA A +L+PTRELA Q++E
Sbjct: 65 GRDVMGAAQTGTGKTAGFSLPIIQLLLAHA-NTSASPARHPVRALILTPTRELADQVAEN 123
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+A LR V+ GGVD+ QT AL IV+ATPGRL+DH+ K +L + L
Sbjct: 124 VKAYCRHTPLRSTVVFGGVDIAPQTAALRSGIEIVIATPGRLLDHVQQ-KTLNLSQTQIL 182
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
V+DEADR+L+ F L I+N++P+ RQ +FSAT + ++KKL LKNPV IE A
Sbjct: 183 VMDEADRMLDMGFLPDLQRIINLLPKERQNLMFSATFSGEIKKLAATFLKNPVTIEVARS 242
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T D + Q V + K + YI+ E + +VF+ T LA L N G A
Sbjct: 243 NATADNVTQTMYHVNEQTKAEAVSYIIRERNLKQVIVFSNTKIGASKLARHLENEGVNAS 302
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G +Q++R+ AL FK GE +L+ TDVA+RGLDI + VIN+D+P N++DY+HR+
Sbjct: 303 AIHGDKTQNERMAALEAFKRGEIEVLVATDVAARGLDIAELPCVINFDLPYNAEDYVHRI 362
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
GRT RAG +G AISL + + IEK+I K
Sbjct: 363 GRTGRAGASGDAISLYADKDERLLVDIEKMIKYKF 397
>gi|423343393|ref|ZP_17321106.1| hypothetical protein HMPREF1077_02536 [Parabacteroides johnsonii
CL02T12C29]
gi|409215468|gb|EKN08468.1| hypothetical protein HMPREF1077_02536 [Parabacteroides johnsonii
CL02T12C29]
Length = 425
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 160/393 (40%), Positives = 224/393 (56%), Gaps = 12/393 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G DL+G AQTG+GKT AF++PI+Q + E ++R P A VL+PTRELAIQI E F A
Sbjct: 44 GSDLLGCAQTGTGKTAAFSIPIIQKIEEQISSRRK-PGIKALVLTPTRELAIQIGESFTA 102
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVL 127
G ++ V+ GGV QT AL + +++ATPGRL+D L+ +GF L TL+Y VL
Sbjct: 103 YGCYTHVKHTVIFGGVGQKPQTDALERGVDVLIATPGRLLDLLS--QGFIRLDTLEYFVL 160
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L+ F + IL ++P+ RQ+ FSATM ++++L L P K+E S
Sbjct: 161 DEADRMLDMGFIHDIKRILPLLPKKRQSLFFSATMPPEIERLAGTILHEPEKVEVTPVSS 220
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDT+ Q FV K L +L + S S +VFTRT +A +L G A I
Sbjct: 221 TVDTIDQSVYFVEKVEKINLLKNLLEDRSLESVLVFTRTKYGADKVARVLNKSGIGAEAI 280
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G Q+ R AL+ FK +LI TD+ASRG+D+ + VINYD+P + Y+HR+GR
Sbjct: 281 HGDKGQNARQRALSSFKDHTLRVLIATDIASRGIDVDHLSHVINYDLPNVPETYVHRIGR 340
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
T RAGR+G+A S + E+ + I+KLIGK +P E + E V E K+
Sbjct: 341 TGRAGRSGIAFSFCDVEEVPYLKDIQKLIGKDVPVAGGHMFETAEVKEAVAEKKK----A 396
Query: 368 IKDSGNKRRRKGGDEDDDIGRQFGINKKKLSKR 400
+K+ +R G D R NKK+ + +
Sbjct: 397 MKEESKRRNMFGNKRDGSFWR----NKKRTANK 425
>gi|325090197|gb|EGC43507.1| ATP-dependent RNA helicase DBP8 [Ajellomyces capsulatus H88]
Length = 539
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 157/378 (41%), Positives = 233/378 (61%), Gaps = 32/378 (8%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA PILQ + AE+ + FA +L+PTRELA+QI EQ +A
Sbjct: 146 GRDCIGGSRTGSGKTVAFAAPILQ---KWAEDPFGI---FAVILTPTRELALQIFEQIKA 199
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYL 125
+ + SL+ ++ GG +M Q +AL +RPHIV+ATPGRL DH+T++ ++ L + +
Sbjct: 200 ISAPQSLKPILITGGTEMRPQAIALSQRPHIVIATPGRLADHITSSGADTICGLNRTRVV 259
Query: 126 VLDEADRLLNDDFEKSLDEI---LNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKNP 177
V DEADRLL L ++ L+ +P RQT LF+AT+T +V+ L+ R K P
Sbjct: 260 VFDEADRLLASGPGSMLPDVETCLSTLPPSTARQTLLFTATVTPEVRALKSMPRPANKLP 319
Query: 178 V---KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSAS--STMVFTRTCDATRL 232
+ ++ +K S TLKQ Y VP +++ +L +++ + S ++F L
Sbjct: 320 IFVTEVSTENKASIPPTLKQTYLQVPLTHREAFLHTLISTAANSQKPAIIFCNRTKTADL 379
Query: 233 LALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINY 292
+ MLR LG R + + QS+R L++F+A IL+ TDVA+RGLDIPSV +VIN+
Sbjct: 380 VERMLRRLGHRVTSLHSLLPQSERTANLSRFRASAARILVATDVAARGLDIPSVSLVINF 439
Query: 293 DIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL 352
D+P N DY+HRVGRTARAGR G A++LV Q +++ L IE +G+++ E+ +EE V +
Sbjct: 440 DVPRNPDDYVHRVGRTARAGREGEAVTLVGQRDVQLVLAIEDRVGREMVEW--KEEGVSI 497
Query: 353 --------LLERVTEAKR 362
+L+ V EAKR
Sbjct: 498 EGRVVRGGILKEVGEAKR 515
>gi|33594279|ref|NP_881923.1| ATP-dependent RNA helicase [Bordetella pertussis Tohama I]
gi|384205577|ref|YP_005591316.1| putative ATP-dependent RNA helicase [Bordetella pertussis CS]
gi|408417408|ref|YP_006628115.1| ATP-dependent RNA helicase [Bordetella pertussis 18323]
gi|33564354|emb|CAE43658.1| putative ATP-dependent RNA helicase [Bordetella pertussis Tohama I]
gi|332383691|gb|AEE68538.1| putative ATP-dependent RNA helicase [Bordetella pertussis CS]
gi|401779578|emb|CCJ65116.1| putative ATP-dependent RNA helicase [Bordetella pertussis 18323]
Length = 477
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 149/345 (43%), Positives = 212/345 (61%), Gaps = 9/345 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF LPIL L+ +A N PA A +L+PTRELA Q+ E
Sbjct: 54 GRDVMGAAQTGTGKTAAFTLPILHRLMPLA-NTSASPARHPVRALILTPTRELADQVYES 112
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+ LR AV+ GGVD+ Q AL + ++VATPGRL+DH+ K +L + L
Sbjct: 113 VKRYSLHTPLRSAVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHVEQ-KNVNLSQVGIL 171
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L+ I+ ++P RQ LFSAT + +++KL R+ L +PV+IE A++
Sbjct: 172 VLDEADRMLDMGFLPDLERIIRLLPAQRQGLLFSATFSNEIRKLGRSYLNHPVEIEVAAR 231
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T DT+ Q + K +V+++ +VF+ T T LA L G +A
Sbjct: 232 NATADTVTQIAYQMHGDTKRAAVVHLVKSRGLKQVIVFSNTKIGTARLARQLERDGVKAE 291
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G +Q R+ AL FKAG+ +L+ TDVA+RGLD+ V VINYD+P N++DY+HR+
Sbjct: 292 SIHGDKTQGDRMKALEAFKAGDLEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRI 351
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP----EFPAE 346
GRT RAG +G AI+L E + L IEKLI +++P E PA+
Sbjct: 352 GRTGRAGASGEAIALFTADEERYLLDIEKLIKRQVPRGKLELPAD 396
>gi|350272013|ref|YP_004883321.1| putative RNA helicase [Oscillibacter valericigenes Sjm18-20]
gi|348596855|dbj|BAL00816.1| putative RNA helicase [Oscillibacter valericigenes Sjm18-20]
Length = 435
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 153/393 (38%), Positives = 223/393 (56%), Gaps = 9/393 (2%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+DLIG AQTG+GKT AFALPILQ L +E ++ + A +L+PTRELAIQI E FE
Sbjct: 39 RDLIGCAQTGTGKTAAFALPILQNL--ASERRKGIKAL---ILTPTRELAIQIQENFEHY 93
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
G+ + LRC V+ GGV + Q L + I++ATPGRL D L N + ++ VLDE
Sbjct: 94 GTHLPLRCTVIFGGVSQVPQVERLRRGVDILIATPGRLCD-LINQGYVDISQIEVFVLDE 152
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADR+L+ F + + ++LN +P+ RQT LFSATM K+++ L L +PV ++ ST
Sbjct: 153 ADRMLDMGFIRDVKKVLNALPKKRQTLLFSATMPKEIEVLANTILHDPVTVKVDPVTSTA 212
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
++ Q + K L +L S +VFTRT A + L G A+ I G
Sbjct: 213 SSIHQHVYLIDKGNKRRLLAKLLRGREVGSALVFTRTKHAADKVVKELAETGMVAMAIHG 272
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+ SQ+ R AL +FK+G+ IL+ TD+A+RG+DIP + V NY++P + YIHR+GRT
Sbjct: 273 NKSQNARQTALKRFKSGDIKILVATDIAARGIDIPELSHVFNYELPNEPETYIHRIGRTG 332
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRI---SQM 366
RAG GVAIS + E+ + IEKL+G+ +PE +E +L KR +
Sbjct: 333 RAGLGGVAISFCDYDEIPYLKDIEKLMGQTIPEEKSEWPMTILQKSEKAPQKRYGFGNPH 392
Query: 367 TIKDSGNKRRRKGGDEDDDIGRQFGINKKKLSK 399
T + +R + R G++ ++ S+
Sbjct: 393 TTATAKPRRSHAPASDPFSYARPHGVSARQHSR 425
>gi|33598065|ref|NP_885708.1| ATP-dependent RNA helicase [Bordetella parapertussis 12822]
gi|33566623|emb|CAE38832.1| putative ATP-dependent RNA helicase [Bordetella parapertussis]
Length = 477
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 149/345 (43%), Positives = 212/345 (61%), Gaps = 9/345 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF LPIL L+ +A N PA A +L+PTRELA Q+ E
Sbjct: 54 GRDVMGAAQTGTGKTAAFTLPILHRLMPLA-NTSASPARHPVRALILTPTRELADQVYES 112
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+ LR AV+ GGVD+ Q AL + ++VATPGRL+DH+ K +L + L
Sbjct: 113 VKRYSLHTPLRSAVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHVEQ-KNVNLSQVGIL 171
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L+ I+ ++P RQ LFSAT + +++KL R+ L +PV+IE A++
Sbjct: 172 VLDEADRMLDMGFLPDLERIIRLLPAQRQGLLFSATFSNEIRKLGRSYLNHPVEIEVAAR 231
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T DT+ Q + K +V+++ +VF+ T T LA L G +A
Sbjct: 232 NATADTVTQIAYQMHGDTKRAAVVHLVKSRGLKQVIVFSNTKIGTARLARQLERDGVKAE 291
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G +Q R+ AL FKAG+ +L+ TDVA+RGLD+ V VINYD+P N++DY+HR+
Sbjct: 292 SIHGDKTQGDRMKALEAFKAGDLEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRI 351
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP----EFPAE 346
GRT RAG +G AI+L E + L IEKLI +++P E PA+
Sbjct: 352 GRTGRAGASGEAIALFTADEERYLLDIEKLIKRQVPRGKLELPAD 396
>gi|240278937|gb|EER42443.1| ATP-dependent RNA helicase DBP8 [Ajellomyces capsulatus H143]
Length = 539
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 157/378 (41%), Positives = 233/378 (61%), Gaps = 32/378 (8%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA PILQ + AE+ + FA +L+PTRELA+QI EQ +A
Sbjct: 146 GRDCIGGSRTGSGKTVAFAAPILQ---KWAEDPFGI---FAVILTPTRELALQIFEQIKA 199
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYL 125
+ + SL+ ++ GG +M Q +AL +RPHIV+ATPGRL DH+T++ ++ L + +
Sbjct: 200 ISAPQSLKPILITGGTEMRPQAIALSQRPHIVIATPGRLADHITSSGADTICGLNRTRVV 259
Query: 126 VLDEADRLLNDDFEKSLDEI---LNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKNP 177
V DEADRLL L ++ L+ +P RQT LF+AT+T +V+ L+ R K P
Sbjct: 260 VFDEADRLLASGPGSMLPDVETCLSALPPSTARQTLLFTATVTPEVRALKSMPRPANKLP 319
Query: 178 V---KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSAS--STMVFTRTCDATRL 232
+ ++ +K S TLKQ Y VP +++ +L +++ + S ++F L
Sbjct: 320 IFVTEVSTENKASIPPTLKQTYLQVPLTHREAFLHTLISTAANSQKPAIIFCNRTKTADL 379
Query: 233 LALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINY 292
+ MLR LG R + + QS+R L++F+A IL+ TDVA+RGLDIPSV +VIN+
Sbjct: 380 VERMLRRLGHRVTSLHSLLPQSERTANLSRFRASAARILVATDVAARGLDIPSVSLVINF 439
Query: 293 DIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL 352
D+P N DY+HRVGRTARAGR G A++LV Q +++ L IE +G+++ E+ +EE V +
Sbjct: 440 DVPRNPDDYVHRVGRTARAGREGEAVTLVGQRDVQLVLAIEDRVGREMVEW--KEEGVSI 497
Query: 353 --------LLERVTEAKR 362
+L+ V EAKR
Sbjct: 498 EGRVVRGGILKEVGEAKR 515
>gi|413963140|ref|ZP_11402367.1| DEAD/DEAH box helicase [Burkholderia sp. SJ98]
gi|413928972|gb|EKS68260.1| DEAD/DEAH box helicase [Burkholderia sp. SJ98]
Length = 493
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 164/401 (40%), Positives = 226/401 (56%), Gaps = 19/401 (4%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 53 AGRDVMGAAQTGTGKTASFSLPIIQRLLPSA-NTSASPARHPVRALMLTPTRELADQVAA 111
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
+ LR V+ GGVDM Q+ AL + I++ATPGRL+DH+ K +LG ++
Sbjct: 112 NVQTYSKHTPLRSTVVFGGVDMNPQSDALRRGVEILIATPGRLLDHVQQ-KTVNLGQVQM 170
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 171 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVAR 230
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
ST ++Q V K + ++ E +VF + LA +L G A
Sbjct: 231 SNSTNANVRQIVYEVHESDKSGAVAQLIRERELKQVIVFCNSKIGASRLARVLEKDGIVA 290
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQS+R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 291 TAIHGDRSQSERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 350
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRIS 364
+GRT RAG +G A+SL + E + IEKLI + L E EV + R A R
Sbjct: 351 IGRTGRAGASGDALSLCSANERKQLADIEKLIKRPL---QVEPLEVTIRARRDASAPRRD 407
Query: 365 Q-----------MTIKDSGNKRRRKGGDEDDDIGRQFGINK 394
+ + +D RRR G D GRQ I++
Sbjct: 408 ERFGRPERTEHRHSPRDESGPRRRTTGTHDRPRGRQQPIDE 448
>gi|387816925|ref|YP_005677269.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum H04402 065]
gi|322804966|emb|CBZ02525.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum H04402 065]
Length = 425
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 150/376 (39%), Positives = 224/376 (59%), Gaps = 9/376 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDL+G AQTG+GKT AFA+P+LQ L + + + + A VL+PTRELAIQI E FE
Sbjct: 38 GKDLVGCAQTGTGKTAAFAVPVLQNLSKDKKANKNPRSIRALVLAPTRELAIQIGESFEC 97
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G I+L+ AV+ GGV QT L + I++ATPGR++D L N K L ++ VLD
Sbjct: 98 YGKYINLKSAVIFGGVSQNPQTKVLREGVDILIATPGRMLD-LFNQKYIDLRNIECFVLD 156
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ + +I++ +P++RQ LFSATM ++ KL + +K+P+++E ST
Sbjct: 157 EADRMLDMGMIHDVKKIISKLPKIRQNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSST 216
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDT+ Q+ V K K L ++L + S S +VF+ T ++A L G A I
Sbjct: 217 VDTITQEVYHVRKKQKRALLKHLLKDKSIESALVFSTTKRGANMIAKDLVEAGIEAEAIH 276
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ+ R ALN FK G+ +L+ TD+A+RG+D+ + V NY++P + Y+HR+GRT
Sbjct: 277 GNKSQNARQRALNNFKEGKIRVLVATDIAARGIDVNELSHVFNYNLPDVPETYVHRIGRT 336
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
RAG GVAIS + E + IEKLI K++P ++ R + +
Sbjct: 337 GRAGAKGVAISFCDIEETKSLKAIEKLIHKEIPVVEDHPYKI-----RHINEDEVKKENT 391
Query: 369 KDSGNKR---RRKGGD 381
K++ NK+ +R+GG+
Sbjct: 392 KNNYNKKPSSKRQGGN 407
>gi|399927884|ref|ZP_10785242.1| Superfamily II DNA and RNA helicase [Myroides injenensis M09-0166]
Length = 371
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 144/338 (42%), Positives = 205/338 (60%), Gaps = 4/338 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IG AQTG+GKTGAFA+PIL+ LL +++ V VL PTRELA+Q+ + F+
Sbjct: 38 GKDIIGCAQTGTGKTGAFAIPILEGLLNKQTSKKVVETL---VLVPTRELALQVEKSFKD 94
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+++ L GGV + Q AL + P IV+ATPGRL+D L K S+ + LVLD
Sbjct: 95 YSKHTAIKTIALFGGVALPPQIKALKQNPKIVIATPGRLLD-LIQQKLVSISNISTLVLD 153
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD++L+ F + ++L+ +P+ RQT FSATM ++K R L P+K+E A+K T
Sbjct: 154 EADQMLDMGFIHDIKKVLSYVPKKRQTLFFSATMPAAIEKFARTILYQPIKVEVAAKTLT 213
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
+ Q FV + K L IL + + T++FTRT L L+ +G ++ I
Sbjct: 214 AKKVAQSVYFVNQEDKKKVLHTILKNNAETQTLIFTRTKHGANNLVKYLQKVGLNSVAIH 273
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ+ R+ ALN FK NILI TD+A+RG+DI + VINY+IP + Y+HR+GRT
Sbjct: 274 GNKSQNARVAALNNFKNNSINILIATDIAARGIDIDKLPFVINYEIPNVPETYVHRIGRT 333
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAE 346
RAG +G A+SL + E + L I+KL G KL +E
Sbjct: 334 GRAGLSGEAVSLCSPQEKKDLLNIQKLTGVKLQVISSE 371
>gi|302916935|ref|XP_003052278.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733217|gb|EEU46565.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 545
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 172/396 (43%), Positives = 243/396 (61%), Gaps = 36/396 (9%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA+PILQ + A FA VL+PTRELA+QI EQF+A
Sbjct: 151 GRDCIGGSRTGSGKTVAFAVPILQKWADDPT------AIFAVVLTPTRELALQIYEQFKA 204
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKY 124
+ S SL+ ++ GG DM Q + LGKRPH+V+ATPGRL DH+ T G L +KY
Sbjct: 205 ISSPQSLKAILITGGSDMRAQAIELGKRPHVVIATPGRLADHV-RTSGEDTICGLRRVKY 263
Query: 125 LVLDEADRLLNDDFEKSL----DEILNVIPRM--RQTYLFSATMTKKVKKLQRACLK--- 175
+VLDEADRLLN S+ ++ L+V+P RQT LF+AT+T +V+ L+ +K
Sbjct: 264 VVLDEADRLLNATGPGSMLPDVEQCLSVLPPATERQTLLFTATITPEVRALKDMPIKPGK 323
Query: 176 NPVKI-EAASKYSTVD-TLKQQYRFVPAKYKDCYL-VYILTEVSASSTMV-FTRTCDATR 231
PV + E ++ + TL Q Y VP +K+ YL V++LTE + T++ F
Sbjct: 324 QPVFVCEVDTQTLAIPATLNQMYIKVPVTHKEHYLHVFLLTEENVDKTIILFCNRTSTAD 383
Query: 232 LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVIN 291
L +LR L R + + Q +R+ L +F+A IL+ TDVA+RGLDIP V +VIN
Sbjct: 384 YLHHLLRLLEHRVTSLHSKLPQRQRIDNLARFRASAARILVATDVAARGLDIPEVSLVIN 443
Query: 292 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 351
YD+P + DYIHRVGRTARAGR G A+S + Q ++E L IEK +G+++ + EEE V
Sbjct: 444 YDLPRDPDDYIHRVGRTARAGRKGEAVSFIGQRDVELALTIEKRVGREMESW--EEEGVN 501
Query: 352 L-------LLERVTEAKRISQMTIKDS---GNKRRR 377
L +L+ V+E KR + + ++++ G KR+R
Sbjct: 502 LETRVVRDVLKVVSEKKREALLEVEENREVGGKRKR 537
>gi|453088320|gb|EMF16360.1| DEAD-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 507
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 228/396 (57%), Gaps = 35/396 (8%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKD IG ++TGSGKT AFALPILQ + + +A +L+PTRELA+QI EQ +
Sbjct: 110 AGKDCIGGSRTGSGKTIAFALPILQ------QWAKEPSGIYALILTPTRELALQIYEQIQ 163
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS---LGTLKY 124
A+G ++ ++ GG +M +Q + L K+PHIV+ATPGRL DH+ N+ + L +K+
Sbjct: 164 AIGGNQGIKSVLVTGGAEMRKQAIELEKKPHIVIATPGRLADHVLNSGEDTIRGLKKVKF 223
Query: 125 LVLDEADRLLND-------DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKN- 176
+V DEADRLL D E+ LD + + RQT LF+AT+T +V+ L+ + +N
Sbjct: 224 VVFDEADRLLQSGKGSMLGDVERCLDAVPSAA--KRQTLLFTATVTPEVRALKESPRENG 281
Query: 177 ---PVKIEA-ASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSAS---STMVFTRTCDA 229
P E + TL Q Y+ V +K+ YL +IL A+ +T++FT
Sbjct: 282 RPPPFVSEVDIDSLAIPSTLTQTYQLVNVLHKEKYL-HILLSTPANIQKTTIIFTNRTTT 340
Query: 230 TRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMV 289
LL MLR+L R + ++ R+ L +F+AG IL+ TDVA RGLDIP V +V
Sbjct: 341 ANLLEYMLRSLEHRITALHSALTHEDRVNNLARFRAGAARILVATDVAGRGLDIPDVGLV 400
Query: 290 INYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFP----- 344
INYD+P N DYIHRVGRTARAGR GVAISLV Q +++ IE +GK + +
Sbjct: 401 INYDLPRNPDDYIHRVGRTARAGRVGVAISLVGQRDVDLVKAIEARVGKAMVAYEETGVN 460
Query: 345 AEEEEVLLLLERVTEAKRISQMTI---KDSGNKRRR 377
E + L V + KR + + I +D KRRR
Sbjct: 461 VETRVIREALNVVGDKKREAMLNIEEGRDVKGKRRR 496
>gi|365875010|ref|ZP_09414540.1| ATP-dependent RNA helicase RhlE [Elizabethkingia anophelis Ag1]
gi|442589346|ref|ZP_21008154.1| ATP-dependent RNA helicase RhlE [Elizabethkingia anophelis R26]
gi|365757122|gb|EHM99031.1| ATP-dependent RNA helicase RhlE [Elizabethkingia anophelis Ag1]
gi|442560956|gb|ELR78183.1| ATP-dependent RNA helicase RhlE [Elizabethkingia anophelis R26]
Length = 424
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 205/336 (61%), Gaps = 7/336 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKDL+G AQTG+GKT AFA+PILQ L E +EN+ A +L+PTRELAIQI E FE
Sbjct: 37 AGKDLLGCAQTGTGKTAAFAIPILQLLTERSENKHRKGVVKALILTPTRELAIQIEENFE 96
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL-- 125
A G + L+ V+ GGV Q L + I+VATPGRL+D + G + TLK L
Sbjct: 97 AYGRHLPLKTMVIFGGVKQGAQEEKLKRGVDILVATPGRLLDFI----GQGIITLKNLDI 152
Query: 126 -VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
VLDEADR+L+ F + IL +P RQ SATM K+++KL L NPVK+E A
Sbjct: 153 FVLDEADRMLDMGFVHDVKRILKYLPEKRQNLFLSATMPKEIQKLASEILVNPVKVEVAP 212
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
ST +T+ Q FV + K L+++L + S S +VF+RT +A L A
Sbjct: 213 VSSTAETIDQSVFFVEKEDKINLLIHLLQDQSLSPVIVFSRTKHGADKIAKKLNQSKISA 272
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G+ SQ+ R ALN FK+G+ IL+ TD+A+RG+DI ++ V+N+++ ++ Y+HR
Sbjct: 273 EAIHGNKSQNARQNALNNFKSGKTRILVATDIAARGIDIDNLKYVVNFELSDVAETYVHR 332
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG +G + S V+ +L EKLIGKK+
Sbjct: 333 IGRTGRAGASGTSFSFVDGLDLVNLRNTEKLIGKKI 368
>gi|379011900|ref|YP_005269712.1| ATP-dependent RNA helicase RhlE [Acetobacterium woodii DSM 1030]
gi|375302689|gb|AFA48823.1| ATP-dependent RNA helicase RhlE [Acetobacterium woodii DSM 1030]
Length = 430
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 162/399 (40%), Positives = 226/399 (56%), Gaps = 14/399 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDL+G AQTG+GKT AFA+PILQ L N + A VL+PTRELA+QIS+ F+A
Sbjct: 38 GKDLLGCAQTGTGKTAAFAIPILQGLSYEQRNLKGNRPIKALVLAPTRELALQISDSFKA 97
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G + L+ V+ GGV QT AL I+VATPGRL+D L N K L +K VLD
Sbjct: 98 YGKYLGLKTLVIYGGVSQNAQTKALSSGVDILVATPGRLLD-LINQKYIKLNQIKSFVLD 156
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD +L+ + + +I+ +P RQ LFSATM +++ KL + LKNP K+ S
Sbjct: 157 EADMMLDMGMLQDVRKIIKHMPVERQNMLFSATMPQEIAKLSGSILKNPTKVTITPVSSA 216
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ ++Q +V K L+++L S +VF+RT + L G +A I
Sbjct: 217 VEIIEQNVYYVNKNNKINLLIHLLKNKEIVSALVFSRTKHGADKIVKHLERAGFKAQAIH 276
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ+ R ALN FK + IL+ TD+A+RG+DI + V NYD+P + Y+HR+GRT
Sbjct: 277 GNKSQNARQLALNNFKERKTRILVATDIAARGIDIEELSHVFNYDLPEVPETYVHRIGRT 336
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP-----EFPAEEEEVLLLLERVTEAKRI 363
RAG G+AI+ +Q E+ IEKL+ K +P FP + LL T ++R
Sbjct: 337 GRAGLGGIAIAFCDQEEMPLLKSIEKLVSKSIPVVEVHPFPLVQVSSELL---ATSSRRS 393
Query: 364 SQMTIKDSGNKR---RRKGGDEDDDIGRQFGINKKKLSK 399
+ ++S N R + GG +D D R + NKKK SK
Sbjct: 394 NDYQSRNSKNTRSNGKSGGGKKDRD--RFYSKNKKKDSK 430
>gi|348590558|ref|YP_004875020.1| ATP-dependent RNA helicase [Taylorella asinigenitalis MCE3]
gi|347974462|gb|AEP36997.1| ATP-dependent RNA helicase [Taylorella asinigenitalis MCE3]
Length = 444
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 145/335 (43%), Positives = 209/335 (62%), Gaps = 5/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFAC---VLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF LP+L ++ A + T PA VL+PTRELA QIS+
Sbjct: 41 GRDVMGAAQTGTGKTAAFTLPLLNRMIPKA-SFSTSPAKHPVRMLVLTPTRELAEQISKN 99
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
A G+ LR +++ GGVD Q L + IV+ATPGRL+DH+ + +L +++L
Sbjct: 100 VIAYADGLPLRTSLIYGGVDFNAQKHELMRGADIVIATPGRLLDHVEQ-RTINLNQVEFL 158
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
+LDEADR+L+ F L +IL +P RQ+ L+SAT + ++ L + L +PV+I AS
Sbjct: 159 ILDEADRMLDMGFMLDLLKILAQLPSRRQSLLYSATFSDNIRSLAQKFLHDPVEITVASN 218
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
ST T+ Q+ V K+ L+Y+L + ++ ++F+ + L L NL A
Sbjct: 219 NSTASTITQEIFSVSEAEKNAALLYLLASRNFNNVIIFSNRKITCKNLERYLNNLDLSAQ 278
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G +QS+R ALN FK+ +CNIL+ TDVA+RGLDI VD VINY++P S+DY+HR+
Sbjct: 279 SLHGDKTQSERTKALNLFKSSKCNILVATDVAARGLDISDVDAVINYELPPTSEDYVHRI 338
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
GRT RAGR G+AIS+ + E E +IE LIG K
Sbjct: 339 GRTGRAGRKGIAISMYSSDEKESLHEIETLIGTKF 373
>gi|171686908|ref|XP_001908395.1| hypothetical protein [Podospora anserina S mat+]
gi|170943415|emb|CAP69068.1| unnamed protein product [Podospora anserina S mat+]
Length = 576
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 170/396 (42%), Positives = 242/396 (61%), Gaps = 36/396 (9%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AF++PILQ + AEN A F +L+PTRELA+QI EQ +A
Sbjct: 182 GRDCIGGSRTGSGKTVAFSVPILQ---QWAENPS---AIFGVILTPTRELALQIFEQVKA 235
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS----LGTLKY 124
+ S SL+ ++ GG DM Q +AL +RPHIV+ATPGRL DH+ T G+ LG +++
Sbjct: 236 ISSPHSLKAILVTGGADMRAQAIALAQRPHIVIATPGRLADHI-RTSGYDTVCGLGRVRF 294
Query: 125 LVLDEADRLLNDDFEKSL----DEILNVIP--RMRQTYLFSATMTKKV---KKLQRACLK 175
+VLDEADRLL D+ S+ +E L+ +P RQT LF+AT+T++V K + R +
Sbjct: 295 VVLDEADRLLADNGPGSMLPDVEECLSALPPAEKRQTLLFTATITQEVMALKNMPRKPGR 354
Query: 176 NPVKI--EAASKYSTVDTLKQQYRFVPAKYKDCYL-VYILTEVSAS-STMVFTRTCDATR 231
PV + K + TLKQ + VP +++ YL +++LTE + S ++F
Sbjct: 355 EPVFVCEVDTEKLAIPPTLKQMHLQVPVTHREHYLHMFLLTEQNVHKSIIIFCNRTSTAD 414
Query: 232 LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVIN 291
L +LR L R + + Q +R+ L +F+A IL+ TDVA+RGLDIP V MVIN
Sbjct: 415 FLHHLLRLLDHRITSLHSKLPQRQRIDNLGRFRASAARILVATDVAARGLDIPEVKMVIN 474
Query: 292 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 351
YDIP + DYIHRVGRTARAGR G A++ V Q +++ L IE +G+K+ + EEE V
Sbjct: 475 YDIPRDPDDYIHRVGRTARAGRKGDAVTFVGQRDVDLVLAIEDRVGRKMEAW--EEEGVN 532
Query: 352 L-------LLERVTEAKRISQMTI---KDSGNKRRR 377
L L+ V+E KR + + + K+ G KR+R
Sbjct: 533 LETRVVREALKLVSEKKREALLELEEGKEVGGKRKR 568
>gi|302656972|ref|XP_003020220.1| ATP-dependent RNA helicase, putative [Trichophyton verrucosum HKI
0517]
gi|291184030|gb|EFE39602.1| ATP-dependent RNA helicase, putative [Trichophyton verrucosum HKI
0517]
Length = 528
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 165/407 (40%), Positives = 244/407 (59%), Gaps = 32/407 (7%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA PIL E +A +L+PTRELA+QI EQ +A
Sbjct: 136 GRDCIGGSRTGSGKTVAFAAPILHKWSEDPF------GIYAVILTPTRELALQIFEQVKA 189
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG---FSLGTLKYL 125
+ + SL+ ++ GG DM Q + L +RPHIV+ATPGRL DH+ ++ L ++ +
Sbjct: 190 ISAPQSLKPLLITGGSDMRPQAIGLSQRPHIVIATPGRLADHIKSSGEDTIIGLKRVRMV 249
Query: 126 VLDEADRLLNDDFEKSLDEI---LNVIPRM--RQTYLFSATMTKKVKKLQ---RACLKNP 177
VLDEADRLL L ++ L+ +P RQT LF+AT+T +V+ L+ RA K P
Sbjct: 250 VLDEADRLLTSGPGSMLPDVETCLSALPPSSDRQTLLFTATVTPEVRALKSMPRAKNKPP 309
Query: 178 VKI-EAASKYSTVD-TLKQQYRFVPAKYKDCYLVYILTEV--SASSTMVFTRTCDATRLL 233
+ + E +++ +T+ TLKQ Y VP +++ +L +L+ S+ ST++F LL
Sbjct: 310 IFVTEISTENTTIPPTLKQTYLQVPLNHREAFLQVLLSTEGNSSKSTIIFCNRTKTADLL 369
Query: 234 ALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYD 293
+LR L R + + QS+R+ L++F+A +L+ TDVA+RGLDIPSV +VINYD
Sbjct: 370 ERILRRLSHRVTSLHSLLPQSERVANLSRFRASAARLLVATDVAARGLDIPSVGLVINYD 429
Query: 294 IPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLL 353
+P N DYIHRVGRTARAGR G AI+LV Q +++ L IE +GK++ + EE V +
Sbjct: 430 VPRNPDDYIHRVGRTARAGREGEAITLVGQRDVQLVLAIEARVGKQMVAW--EEPGVNI- 486
Query: 354 LERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQ-FGINKKKLSK 399
E++ + +K+ G+ +R G+ D+ GR G +KL K
Sbjct: 487 -----ESRIVKATVLKEVGSTKREAMGEIDE--GRDVLGRRVRKLKK 526
>gi|152981130|ref|YP_001352218.1| ATP-dependent RNA helicase [Janthinobacterium sp. Marseille]
gi|151281207|gb|ABR89617.1| ATP-dependent RNA helicase [Janthinobacterium sp. Marseille]
Length = 513
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 161/401 (40%), Positives = 223/401 (55%), Gaps = 14/401 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G D++G AQTG+GKT F+LPI+Q L+ A N PA A +L+PTRELA Q+++
Sbjct: 73 GIDVMGAAQTGTGKTAGFSLPIIQLLMAHA-NSSASPARHPVRALILTPTRELADQVADN 131
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+A LR V+ GGVDM QT AL IV+ATPGRL+DH+ K +L + L
Sbjct: 132 VKAYSRHTPLRSVVVFGGVDMAPQTAALRSGVEIVIATPGRLLDHIQQ-KTLNLSQTQIL 190
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
V+DEADR+L+ F L I+N++P+ RQ +FSAT + ++KKL LK+PV IE A
Sbjct: 191 VMDEADRMLDMGFLPDLQRIINLLPKQRQNLMFSATFSPEIKKLAATFLKDPVTIEVARS 250
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T + + Q V K + YI+ E +VF+ T LA L N G +A
Sbjct: 251 NATAENVTQIVYKVEEGDKGDAVSYIIRERGLKQVIVFSNTKIGASRLARQLENEGVKAS 310
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G SQ++R+ AL FK G +L+ TDVA+RGLDI + VINYD+P N++DY+HR+
Sbjct: 311 AIHGDKSQAERMAALEAFKNGTIEVLVATDVAARGLDIAELPCVINYDLPYNAEDYVHRI 370
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
GRT RAG +G AISL + + + IEK+I K PA+ + R +E K S
Sbjct: 371 GRTGRAGASGDAISLYSDKDARLLVDIEKMIKHKF--VPAQLAGFVPAGNRASERKERSP 428
Query: 366 MTIKDSGNKR-----RRKGGDEDDDIGRQFGINKKKLSKRK 401
+D R RR+ + GR G + RK
Sbjct: 429 R--RDDSESRGRGSERRESAPREASGGRDPGSRSAYAAPRK 467
>gi|359795873|ref|ZP_09298486.1| putative ATP-dependent RNA helicase [Achromobacter arsenitoxydans
SY8]
gi|359366192|gb|EHK67876.1| putative ATP-dependent RNA helicase [Achromobacter arsenitoxydans
SY8]
Length = 466
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 209/336 (62%), Gaps = 5/336 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF LPIL L+ +A N PA A +L+PTRELA Q+ E
Sbjct: 31 GRDVMGAAQTGTGKTAAFTLPILHRLMPLA-NTSASPARHPVRALILTPTRELADQVYES 89
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+ LR AV+ GGVD+ Q AL + ++VATPGRL+DH+ K +L + L
Sbjct: 90 VKRYSKQTPLRSAVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHVEQ-KNVNLSQVGIL 148
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L+ I+ ++P RQ LFSAT + +++KL R+ L +PV+IE A++
Sbjct: 149 VLDEADRMLDMGFLPDLERIIRLLPAQRQGLLFSATFSNEIRKLGRSYLNHPVEIEVAAR 208
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T T+ Q + + K +V+++ +VF+ T T LA L G +A
Sbjct: 209 NATATTITQIAYKMTSDAKRAAVVHLVKSRGLKQVIVFSNTKIGTARLARDLERDGVKAE 268
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G +Q+ R+ AL FKAGE +L+ TDVA+RGLD+ V VINYD+P NS+DY+HR+
Sbjct: 269 SIHGDKTQADRMKALEAFKAGELEVLVATDVAARGLDVAGVPCVINYDLPYNSEDYVHRI 328
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
GRT RAG +G AI+L E + L IEKLI +++P
Sbjct: 329 GRTGRAGASGEAIALFTADEERYLLDIEKLIKREVP 364
>gi|358256585|dbj|GAA50154.1| ATP-dependent RNA helicase DDX49/DBP8 [Clonorchis sinensis]
Length = 766
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 156/391 (39%), Positives = 227/391 (58%), Gaps = 44/391 (11%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D++ A+TGSGKT F +PI+Q+L+ + F+A +++PTRELA QI EQ
Sbjct: 319 GMDVVACAKTGSGKTATFLIPIIQSLMT------ELKPFYALIITPTRELAHQIGEQAAG 372
Query: 69 LGS--GISLRCAVLV--GGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG-------- 116
L G SL C VL+ GG ++ Q + L + PHIVVATPGRL D L +
Sbjct: 373 LNLILGTSL-CNVLIITGGKSIVHQGIDLARGPHIVVATPGRLADLLRTQQANLDDPSNP 431
Query: 117 ----FSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRA 172
+SL + +VLDEADRLL D+F L I+N +P RQT LFSAT + VK A
Sbjct: 432 SSTEWSLMRTRVVVLDEADRLLEDNFGADLSLIMNALPERRQTLLFSATFSDAVKTAVEA 491
Query: 173 C-------------LKNPVKIEAASKY----STVDTLKQQYRFVPAKYKDCYLVY----I 211
L P ++ +S STVDTL Q Y + ++K+ +LV+
Sbjct: 492 SKARALEQNKRPPLLWQPAEVIGSSSSTVGASTVDTLSQFYLLMRPEHKEAFLVHTVDQF 551
Query: 212 LTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 271
LTE S +VFT C L+ LM+ +LG + + + M Q +R+ +L F++ + IL
Sbjct: 552 LTENPCSLIIVFTNKCKWCHLIGLMMNSLGMKTVLLHSAMRQRERISSLTLFRSSQVRIL 611
Query: 272 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 331
I TD+ASRGLD P+VD+VIN+++P KDY+HRVGRTARAG+TG+A++L + +E++
Sbjct: 612 IATDLASRGLDFPTVDIVINHNVPIRPKDYVHRVGRTARAGKTGLALTLCDLFEIKRLRA 671
Query: 332 IEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
I++ IG+ L F E++V ++ V+ A+R
Sbjct: 672 IQEFIGRDLSPFEVNEKKVAKIITEVSMARR 702
>gi|319763758|ref|YP_004127695.1| dead/deah box helicase domain-containing protein [Alicycliphilus
denitrificans BC]
gi|330823978|ref|YP_004387281.1| DEAD/DEAH box helicase [Alicycliphilus denitrificans K601]
gi|317118319|gb|ADV00808.1| DEAD/DEAH box helicase domain protein [Alicycliphilus denitrificans
BC]
gi|329309350|gb|AEB83765.1| DEAD/DEAH box helicase domain protein [Alicycliphilus denitrificans
K601]
Length = 480
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 146/335 (43%), Positives = 206/335 (61%), Gaps = 5/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
GKD++G AQTG+GKT AF+LP+LQ LL+ EN PA A VL PTRELA Q+++Q
Sbjct: 40 GKDVMGAAQTGTGKTAAFSLPLLQRLLK-HENSSASPARHPVRALVLLPTRELADQVAQQ 98
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
LR V+ GG+DM QT L K ++VATPGRL+DH+ K L ++Y+
Sbjct: 99 IAMYAKYTKLRSTVVFGGMDMKPQTAELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYV 157
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L++PV IE A
Sbjct: 158 VLDEADRMLDIGFLPDLQRILSYLPKQRTTLLFSATFSPEIKRLAGSYLQDPVTIEVARP 217
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
T T++Q++ V K + ++LTE +F + LA L G +
Sbjct: 218 NETASTVEQRFFSVQDDDKRRAIRHVLTERGLKQAFIFVNSKLGCARLARSLERDGLKTA 277
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL FK+G+ ++L+CTDVA+RGLDI V V N+D+P N++DY+HR+
Sbjct: 278 ALHGDKSQDERLKALEAFKSGDVDLLVCTDVAARGLDIKDVPAVFNHDVPFNAEDYVHRI 337
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
GRT RAG +G+A++LV + IEKLI KK+
Sbjct: 338 GRTGRAGASGLAVTLVGSGDARLVADIEKLIKKKV 372
>gi|291614701|ref|YP_003524858.1| DEAD/DEAH box helicase domain protein [Sideroxydans lithotrophicus
ES-1]
gi|291584813|gb|ADE12471.1| DEAD/DEAH box helicase domain protein [Sideroxydans lithotrophicus
ES-1]
Length = 450
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 152/335 (45%), Positives = 206/335 (61%), Gaps = 5/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G DL+ AQTG+GKT AFALP+LQ LL A + T PA A +L PTRELA+Q+ E
Sbjct: 41 GHDLMAGAQTGTGKTAAFALPMLQKLLPHA-SASTSPAKHPVRALILVPTRELAVQVEES 99
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+A +LR V+ GGVD+ QT L I+VATPGRL+DH+ K L ++ L
Sbjct: 100 VKAYAKHTNLRSLVVYGGVDIKTQTPHLKTGVEILVATPGRLLDHIEQ-KTVLLNQVQML 158
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F +L IL ++PR RQ+ +FSAT + ++KKL + P IE A
Sbjct: 159 VLDEADRMLDMGFMPALKRILALLPRQRQSLMFSATFSNEIKKLSEDFMNYPTLIEVARS 218
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
++ + + Q+ V K L +L A +VFT+T LA L+ G A
Sbjct: 219 NASAENITQKVYLVEQSGKHQLLAQLLRGDDAKQVIVFTKTKLTASRLAKQLQREGVSAD 278
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G SQ +R+ AL+ FK G +LI TDVA+RGLDI S+ MVINY+IP ++DY+HR+
Sbjct: 279 AIHGDKSQLERMQALDAFKQGRVAVLIATDVAARGLDIDSLPMVINYEIPHAAEDYVHRI 338
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
GRT RAG +G AISLV+ E ++ L+IEKLI K++
Sbjct: 339 GRTGRAGASGTAISLVSPEEEKYLLEIEKLIKKEI 373
>gi|312796956|ref|YP_004029878.1| ATP-dependent RNA helicase [Burkholderia rhizoxinica HKI 454]
gi|312168731|emb|CBW75734.1| ATP-dependent RNA helicase [Burkholderia rhizoxinica HKI 454]
Length = 508
Score = 263 bits (673), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 151/342 (44%), Positives = 207/342 (60%), Gaps = 5/342 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT +F+LPI+Q LL +A + PA A +L+PTRELA Q++
Sbjct: 78 AGRDVMGAAQTGTGKTASFSLPIIQRLLPLASTSAS-PARHPVRALILTPTRELADQVAA 136
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A +LR AV+ GGVDM QT L + I++ATPGRL+DH+ K SL ++
Sbjct: 137 NVHAYAKHTALRSAVVFGGVDMNPQTAELRRGVEILIATPGRLLDHVQQ-KSTSLAQVQM 195
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P RQT LFSAT + ++KKL L++PV IE A
Sbjct: 196 LVLDEADRMLDMGFLPDLQRILNLLPSQRQTLLFSATFSAEIKKLASTYLRDPVTIEVAR 255
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
ST ++Q V K +V ++ + +VF + LA L G A
Sbjct: 256 SNSTASNVRQIVFEVAEPDKQAAVVQLIRQRELKQVIVFCNSKIGASRLAKQLERDGVVA 315
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQS+R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 316 TAIHGDRSQSERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 375
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAE 346
+GRT RAG +G A+SL + E + IEKLI + L P E
Sbjct: 376 IGRTGRAGASGDALSLFSGNERKQLADIEKLIKRALTIEPLE 417
>gi|218261592|ref|ZP_03476346.1| hypothetical protein PRABACTJOHN_02014 [Parabacteroides johnsonii
DSM 18315]
gi|218223947|gb|EEC96597.1| hypothetical protein PRABACTJOHN_02014 [Parabacteroides johnsonii
DSM 18315]
Length = 419
Score = 263 bits (673), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 160/393 (40%), Positives = 223/393 (56%), Gaps = 12/393 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G DL+G AQTG+GKT AF++PI+Q + E + R P A VL+PTRELAIQI E F A
Sbjct: 38 GSDLLGCAQTGTGKTAAFSIPIIQKIEEQI-SSRCKPGIKALVLTPTRELAIQIGESFTA 96
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVL 127
G ++ V+ GGV QT AL + +++ATPGRL+D L+ +GF L TL+Y VL
Sbjct: 97 YGCYTHVKHTVIFGGVGQKPQTDALERGVDVLIATPGRLLDLLS--QGFIRLDTLEYFVL 154
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L+ F + IL ++P+ RQ+ FSATM ++++L L P K+E S
Sbjct: 155 DEADRMLDMGFIHDIKRILPLLPKKRQSLFFSATMPPEIERLAGTILHEPEKVEVTPVSS 214
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDT+ Q FV K L +L + S S +VFTRT +A +L G A I
Sbjct: 215 TVDTIDQSVYFVEKVEKINLLKNLLEDRSLESVLVFTRTKYGADKVARVLNKSGIGAEAI 274
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G Q+ R AL+ FK +LI TD+ASRG+D+ + VINYD+P + Y+HR+GR
Sbjct: 275 HGDKGQNARQRALSSFKDHTLRVLIATDIASRGIDVDHLSHVINYDLPNVPETYVHRIGR 334
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
T RAGR+G+A S + E+ + I+KLIGK +P E + E V E K+
Sbjct: 335 TGRAGRSGIAFSFCDVEEVPYLKDIQKLIGKDVPVAGGHMFETAEVKEAVAEKKK----A 390
Query: 368 IKDSGNKRRRKGGDEDDDIGRQFGINKKKLSKR 400
+K+ +R G D R NKK+ + +
Sbjct: 391 MKEESKRRNMFGNKRDGSFWR----NKKRTANK 419
>gi|407940452|ref|YP_006856093.1| DEAD/DEAH box helicase [Acidovorax sp. KKS102]
gi|407898246|gb|AFU47455.1| DEAD/DEAH box helicase [Acidovorax sp. KKS102]
Length = 490
Score = 263 bits (673), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 144/335 (42%), Positives = 205/335 (61%), Gaps = 5/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF+LP+LQ LL+ EN T PA A VL PTRELA Q+++Q
Sbjct: 40 GQDVMGAAQTGTGKTAAFSLPLLQRLLK-HENSSTSPARHPVRALVLLPTRELADQVAQQ 98
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
LR V+ GG+DM QT+ L K ++VATPGRL+DH+ K L ++Y+
Sbjct: 99 IALYAKHTKLRSTVVFGGMDMKPQTIELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYV 157
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L+NP+ IE A
Sbjct: 158 VLDEADRMLDIGFLPDLQRILSYLPKQRTTLLFSATFSPEIKRLAGSYLQNPITIEVARP 217
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
T T++Q++ K + ++L +F + LA L G +
Sbjct: 218 NETASTVEQRFYSANDDDKRRAIHHVLKTRGIKQAFIFVNSKLGCARLARSLEREGLKTA 277
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL FK GE ++L+CTDVA+RGLDI V V N+D+P N++DY+HR+
Sbjct: 278 ALHGDKSQDERLKALEAFKKGEVDLLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRI 337
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
GRT RAG +G+A++LV+ + IEKLI KK+
Sbjct: 338 GRTGRAGASGLAVTLVSGSDARLVADIEKLIKKKI 372
>gi|326470936|gb|EGD94945.1| ATP-dependent RNA helicase DBP8 [Trichophyton tonsurans CBS 112818]
gi|326478499|gb|EGE02509.1| ATP-dependent RNA helicase DBP8 [Trichophyton equinum CBS 127.97]
Length = 528
Score = 263 bits (673), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 165/407 (40%), Positives = 244/407 (59%), Gaps = 32/407 (7%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA PIL E +A +L+PTRELA+QI EQ +A
Sbjct: 136 GRDCIGGSRTGSGKTVAFAAPILHKWSEDPF------GIYAVILTPTRELALQIFEQVKA 189
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG---FSLGTLKYL 125
+ + SL+ ++ GG DM Q + L +RPHIV+ATPGRL DH+ ++ L ++ +
Sbjct: 190 ISAPQSLKPLLITGGSDMRPQAIGLSQRPHIVIATPGRLADHIKSSGEDTIIGLRRVRMV 249
Query: 126 VLDEADRLLNDDFEKSLDEI---LNVIPRM--RQTYLFSATMTKKVKKLQ---RACLKNP 177
VLDEADRLL L ++ L+ +P RQT LF+AT+T +V+ L+ RA K P
Sbjct: 250 VLDEADRLLTSGPGSMLPDVETCLSALPPSSDRQTLLFTATVTPEVRALKSMPRAKNKPP 309
Query: 178 VKI-EAASKYSTVD-TLKQQYRFVPAKYKDCYLVYILTEV--SASSTMVFTRTCDATRLL 233
+ + E +++ +T+ TLKQ Y VP +++ +L +L+ S+ ST++F LL
Sbjct: 310 IFVTEISTENTTIPPTLKQTYLQVPLNHREAFLHVLLSTEGNSSKSTIIFCNRTKTADLL 369
Query: 234 ALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYD 293
+LR L R + + QS+R+ L++F+A +L+ TDVA+RGLDIPSV +VINYD
Sbjct: 370 ERILRRLSHRVTSLHSLLPQSERIANLSRFRASAARLLVATDVAARGLDIPSVGLVINYD 429
Query: 294 IPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLL 353
+P N DYIHRVGRTARAGR G AI+LV Q +++ L IE +GK++ + EE V +
Sbjct: 430 VPRNPDDYIHRVGRTARAGREGEAITLVGQRDVQLVLAIEARVGKQMVAW--EEPGVNI- 486
Query: 354 LERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQ-FGINKKKLSK 399
E++ + +K+ G+ +R G+ D+ GR G +KL K
Sbjct: 487 -----ESRIVKGTVLKEVGSTKREAMGEIDE--GRDVLGRRVRKLKK 526
>gi|393783444|ref|ZP_10371617.1| hypothetical protein HMPREF1071_02485 [Bacteroides salyersiae
CL02T12C01]
gi|392668877|gb|EIY62370.1| hypothetical protein HMPREF1071_02485 [Bacteroides salyersiae
CL02T12C01]
Length = 421
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 170/397 (42%), Positives = 230/397 (57%), Gaps = 20/397 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDL+G AQTG+GKT AF++PILQ L + + A +L+PTRELAIQI E FEA
Sbjct: 38 GKDLLGCAQTGTGKTAAFSIPILQKLYKTDHRK----GIKALILTPTRELAIQIGECFEA 93
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVL 127
G L+ AV+ GGV QT AL I+VATPGRL+D +T +GF SL TL + VL
Sbjct: 94 YGRYTGLKHAVIFGGVGQKPQTDALRNGVQILVATPGRLLDLIT--QGFISLKTLDFFVL 151
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L+ F + IL ++P RQT FSATM +++ L + L +P K+E S
Sbjct: 152 DEADRMLDMGFIHDIRRILKLLPAKRQTLFFSATMPPEIETLANSMLTDPEKVEVTPASS 211
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDT+ Q FV K K L+++L + S S ++FTRT LA L G RA I
Sbjct: 212 TVDTIAQHVYFVEKKEKKDLLLHLLKDKSIESVLIFTRTKYGADKLARTLTKAGIRAEAI 271
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G+ SQ+ R AL +FK +LI TD+A+RG+D+ + VINY++P + Y+HR+GR
Sbjct: 272 HGNKSQNARQRALTEFKNHTLRVLIATDIAARGIDVDQLSHVINYELPNVPETYVHRIGR 331
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP---EFPAEEEEVLLLLERVTEAKRIS 364
T RAG G+AIS E+ + I+KLIGK +P E P E + E TE
Sbjct: 332 TGRAGHEGIAISFCESEEIPYLKDIQKLIGKTIPVVSEHPFITNEGMKAQEVKTE----- 386
Query: 365 QMTIKDSGNKRRRKGGDEDDDIGRQFGINKKKLSKRK 401
++ K NK R G + D R+ KK++ KR+
Sbjct: 387 EIKAKAKENKVYR-GSRSNGDFWRR----KKQVPKRE 418
>gi|421486785|ref|ZP_15934320.1| ATP-dependent RNA helicase [Achromobacter piechaudii HLE]
gi|400194954|gb|EJO27955.1| ATP-dependent RNA helicase [Achromobacter piechaudii HLE]
Length = 497
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/345 (42%), Positives = 212/345 (61%), Gaps = 9/345 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF LPIL L+ +A N PA A +L+PTRELA Q+ E
Sbjct: 54 GRDVMGAAQTGTGKTAAFTLPILHRLMPLA-NASASPARHPVRALILTPTRELADQVYES 112
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+ LR AV+ GGVD+ Q AL + ++VATPGRL+DH+ K +L + L
Sbjct: 113 VKRYSKQTPLRSAVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHVEQ-KNVNLSQVGIL 171
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L+ I+ ++P RQ LFSAT + +++KL R+ L +PV+IE A++
Sbjct: 172 VLDEADRMLDMGFLPDLERIIRLLPTQRQGLLFSATFSNEIRKLGRSYLNHPVEIEVAAR 231
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T T+ Q + K +V+++ +VF+ T T LA L G +A
Sbjct: 232 NATATTITQIAYKMSGDAKRAAVVHLVKSRGLKQVIVFSNTKIGTARLARELERDGVKAE 291
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G +Q+ R+ AL FKAGE +L+ TDVA+RGLD+ V VINYD+P N++DY+HR+
Sbjct: 292 SIHGDKTQADRMKALEAFKAGELEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRI 351
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP----EFPAE 346
GRT RAG +G AI+L E + L IEKLI +++P + PA+
Sbjct: 352 GRTGRAGASGEAIALFTPDEERFLLDIEKLIKREVPRGTLDLPAD 396
>gi|409099575|ref|ZP_11219599.1| DEAD/DEAH box helicase [Pedobacter agri PB92]
Length = 433
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/333 (43%), Positives = 202/333 (60%), Gaps = 1/333 (0%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDL+G AQTG+GKT AFA+P+LQ L E N + A VL+PTRELAIQI E F+A
Sbjct: 38 GKDLLGCAQTGTGKTAAFAIPMLQLLHEKHINTKATKNIKALVLTPTRELAIQIEESFKA 97
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
GS ++LR V+ GGV+ Q AL K I+VATPGRL+D L N +L T++ VLD
Sbjct: 98 YGSNLNLRHLVIFGGVNQHSQVEALRKGVDILVATPGRLLD-LMNQGFITLNTIELFVLD 156
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F + ++ +P RQT FSATM +++KL L +P K+E ST
Sbjct: 157 EADRMLDMGFIHDVKRVVAKLPAKRQTLFFSATMPDEIQKLANTILSSPTKVEVTPISST 216
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
+T+ Q FV K L+++L + + + +VFTRT + L + G +A I
Sbjct: 217 AETIVQSVYFVDKPDKKKLLIHLLEDKNIQTALVFTRTKHGADRIVKDLGHSGIKAAAIH 276
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ+ R AL FK + +L+ TD+A+RG+DI + V N+++P + Y+HR+GRT
Sbjct: 277 GNKSQNARQRALTDFKDRKIRVLVATDIAARGIDIDQLSHVFNFELPNIPESYVHRIGRT 336
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
RAG G+AIS + E E+ L I+KLI LP
Sbjct: 337 GRAGANGIAISFCDAEENEYLLDIQKLIKITLP 369
>gi|312129179|ref|YP_003996519.1| dead/deah box helicase domain-containing protein [Leadbetterella
byssophila DSM 17132]
gi|311905725|gb|ADQ16166.1| DEAD/DEAH box helicase domain protein [Leadbetterella byssophila
DSM 17132]
Length = 373
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/333 (43%), Positives = 205/333 (61%), Gaps = 6/333 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DL+G AQTG+GKT AFA+PIL+ +L+ +N+R + +L+PTRELAIQI + F+A
Sbjct: 38 GQDLLGCAQTGTGKTAAFAIPILERILQNPKNKRQIRVL---ILTPTRELAIQIGDNFKA 94
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVL 127
I + AV+ GGV+ +Q L + I++ATPGRL+D ++ +GF L L LVL
Sbjct: 95 YSKHIKISHAVIFGGVNQNKQVNQLKQGVEILIATPGRLLDLMS--QGFVRLNGLDTLVL 152
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L+ F + +IL IP RQT FSATM + ++K + L NP +E S
Sbjct: 153 DEADRMLDMGFVHDVKKILTKIPTERQTLFFSATMPQSIRKFAASILTNPAYVEVTPVSS 212
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
T +T+KQ FV K K L+ IL + S T++FTRT L L +G A I
Sbjct: 213 TAETVKQGVYFVDKKEKTPLLINILKDQSTDRTLIFTRTKHGADKLVKQLGKVGIPAAAI 272
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G+ SQ+ R AL FK+ N+LI TD+A+RG+DI + VINY++P + Y+HR+GR
Sbjct: 273 HGNKSQNARQRALEDFKSSRLNVLIATDIAARGIDIEELPYVINYELPNVPETYVHRIGR 332
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
T RAG GVA+S +Q EL + I+KL G ++
Sbjct: 333 TGRAGAEGVAVSFCDQEELNDFKNIQKLTGIRI 365
>gi|402467624|gb|EJW02900.1| hypothetical protein EDEG_02724 [Edhazardia aedis USNM 41457]
Length = 403
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/373 (38%), Positives = 218/373 (58%), Gaps = 13/373 (3%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
K +I LA TGSGKT AFA+PIL +++ T+ +++PTRELA+QI+ FE L
Sbjct: 40 KSVITLANTGSGKTLAFAVPILNDIIKYNTYYHTL------IITPTRELAMQIANVFENL 93
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
G LR L+GGVD +Q + + PHI++ TPGRL + K F L+Y VLDE
Sbjct: 94 GQNHGLRVVTLIGGVDEKEQKRKIFESPHIIIGTPGRLSLIMQKVKLFD--RLQYFVLDE 151
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
D+LL + + +I N + + +FSATMT ++ L L +PVK+ + TV
Sbjct: 152 GDKLLETTYADDIRKISNEVNENKSMLIFSATMTDSLQSLIDLNLIDPVKVVINKTFDTV 211
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
L Q+Y F+P KYK+ YL Y++ + + S +VF +C + L + L+N+ + + G
Sbjct: 212 SKLIQKYVFLPQKYKETYL-YLICQDNLSKKIVFVSSCLGAQTLKIFLQNMNIDCVALHG 270
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+ Q +R LN F + +L+ TDVA+RGLDIP V+MVINYD+P SK+Y+HRVGRTA
Sbjct: 271 KLKQDERCEVLNIFSGKDACVLLATDVAARGLDIPEVEMVINYDLPRTSKEYVHRVGRTA 330
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK 369
R + G+A++ V QY++ + +IE I + + +EE+ L +V+ A + + +K
Sbjct: 331 RLDKEGLAVNFVTQYDVALFQKIEADIKTSMVLYECDEEKAKALFHKVSVAYKTAYDEVK 390
Query: 370 DSG----NKRRRK 378
+S K RRK
Sbjct: 391 ESDMNAKKKHRRK 403
>gi|399023038|ref|ZP_10725105.1| DNA/RNA helicase, superfamily II [Chryseobacterium sp. CF314]
gi|398083597|gb|EJL74302.1| DNA/RNA helicase, superfamily II [Chryseobacterium sp. CF314]
Length = 420
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 204/336 (60%), Gaps = 11/336 (3%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPA---FFACVLSPTRELAIQISEQF 66
KD++G AQTG+GKT AFA+PILQ L E R +P A +L+PTRELAIQI E F
Sbjct: 39 KDVLGTAQTGTGKTAAFAIPILQNLTE-----RPLPKNNYIKALILTPTRELAIQIEESF 93
Query: 67 EALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYL 125
A G + L+ V+ GGV Q AL K I+VATPGRL+D + +G SL L+
Sbjct: 94 NAYGRNLPLKKLVIFGGVKQGSQEAALRKGVDILVATPGRLLDFIA--QGIISLKNLEIF 151
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F + I+ ++P RQT FSATM +++KL + L NPVK+E
Sbjct: 152 VLDEADRMLDMGFVHDVKRIIKLLPPRRQTLFFSATMPTEIQKLADSILNNPVKVEVTPV 211
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
ST +T++Q FV + K L +IL + S +VF+RT +A + G A
Sbjct: 212 SSTAETIQQSVYFVQKEDKLGLLTHILKNHISESVLVFSRTKHGADKIARTIHKSGISAE 271
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G+ SQ+ R ALN FK+G+ +L+ TD+A+RG+DI + VINY++ S+ Y+HR+
Sbjct: 272 AIHGNKSQNARQNALNNFKSGKTRVLVATDIAARGIDIDELKFVINYELSDVSETYVHRI 331
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
GRT RAG G +IS V+ +L EKLIGKK+P
Sbjct: 332 GRTGRAGAEGTSISFVDGLDLLNLRNTEKLIGKKIP 367
>gi|170754379|ref|YP_001780277.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum B1 str.
Okra]
gi|429244269|ref|ZP_19207737.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum CFSAN001628]
gi|169119591|gb|ACA43427.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum B1 str.
Okra]
gi|428758710|gb|EKX81114.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum CFSAN001628]
Length = 425
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 151/375 (40%), Positives = 223/375 (59%), Gaps = 7/375 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G DL+G AQTG+GKT AFA+P+LQ L + + + A VL+PTRELAIQI + FE
Sbjct: 38 GIDLVGCAQTGTGKTAAFAVPVLQNLSKGKKVNKNPRPIRALVLAPTRELAIQIGDSFEC 97
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G I+L+ AV+ GGV QT AL + I++ATPGR++D L N K L ++ VLD
Sbjct: 98 YGKYINLKSAVIFGGVSQNPQTKALREGVDILIATPGRMLD-LFNQKYIDLRNIECFVLD 156
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ + +I++ +P++RQ LFSATM ++ KL + +K+P+++E ST
Sbjct: 157 EADRMLDMGMIHDVKKIISKLPKVRQNLLFSATMPSEITKLVDSIVKDPIRVEVTPASST 216
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDT+ Q+ V K K L ++L + S S +VF+ T ++A L G A I
Sbjct: 217 VDTITQEVYHVRKKQKRALLKHLLKDKSIESALVFSTTKRGANMIAKDLVEAGIEAEAIH 276
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ+ R ALN FK G+ +L+ TD+A+RG+D+ + V NY++P + Y+HR+GRT
Sbjct: 277 GNKSQNARQRALNNFKEGKIRVLVATDIAARGIDVNELSHVFNYNLPDVPETYVHRIGRT 336
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
RAG GVAIS + E + IEKLI K++P EE + + E + + T
Sbjct: 337 GRAGAKGVAISFCDIEETKSLKAIEKLINKEIPVV----EEHPYKIRHINEDEVKKENTN 392
Query: 369 KDSGNK--RRRKGGD 381
+S K +R+GG+
Sbjct: 393 NNSNKKPSSKRQGGN 407
>gi|402307634|ref|ZP_10826656.1| DEAD/DEAH box helicase [Prevotella sp. MSX73]
gi|400378346|gb|EJP31204.1| DEAD/DEAH box helicase [Prevotella sp. MSX73]
Length = 375
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/333 (42%), Positives = 207/333 (62%), Gaps = 2/333 (0%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DL+G+AQTG+GKT AFA+PI+Q L + A++ R A +L+PTRELAIQI E F+
Sbjct: 38 GRDLLGIAQTGTGKTAAFAIPIIQQLAKSADDNRRR-DIKALILTPTRELAIQIEECFKD 96
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LRC V+ GGV Q L + I++ATPGRL+D L + +L +++ VLD
Sbjct: 97 YSKFTRLRCCVIFGGVSQNGQVKELERGVDILIATPGRLLD-LISQHIITLEHIRHFVLD 155
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F + +++ ++P+ RQT LFSATM + + KL ++ L P ++E A S
Sbjct: 156 EADRMLDMGFIHDIKKLIPLLPKRRQTLLFSATMPETIAKLSKSLLYKPARVEVAPVSSV 215
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDT++Q+ FV K LV +L S +VF+RT +A L+ I
Sbjct: 216 VDTIEQRLYFVEKPQKTDLLVSVLKNAGNRSALVFSRTKHGADRIARKLKARHIECEAIH 275
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ+ R AL FK+G+ +++ TD+A+RG+DI ++ MVINYD+P ++ Y+HR+GRT
Sbjct: 276 GNKSQNARQRALTNFKSGKTRVIVATDIAARGIDIANLQMVINYDLPDVAETYVHRIGRT 335
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
RAG +GVA++ Q E I+KL GKKLP
Sbjct: 336 GRAGNSGVALTFCTQDERPMVRDIQKLTGKKLP 368
>gi|262275236|ref|ZP_06053046.1| ATP-dependent RNA helicase [Grimontia hollisae CIP 101886]
gi|262220481|gb|EEY71796.1| ATP-dependent RNA helicase [Grimontia hollisae CIP 101886]
Length = 410
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 203/335 (60%), Gaps = 7/335 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVP-AFFACVLSPTRELAIQISEQFE 67
GKD++G AQTG+GKT AFALP++ LLE R V A V++PTRELA Q+ E+
Sbjct: 39 GKDVMGAAQTGTGKTAAFALPVIHQLLE-----RGVKGAARVLVVTPTRELAQQVYEKVV 93
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
SL+C L GG ++ Q L K+P I+V TPGRL+DHL + +L +L L+L
Sbjct: 94 EYSQHTSLKCVALYGGANINPQKNQLTKKPEIIVGTPGRLLDHL-HIGTLTLNSLDTLIL 152
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L+ F + ++ +P+ RQT FSAT K+V L L NPV+IE ++ S
Sbjct: 153 DEADRMLDMGFISDIKRLMKKMPKTRQTLFFSATYPKQVVDLAYRLLSNPVRIEVSTANS 212
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
T +T+ Q V K K L Y++ + +VF +T +T LA L+ G +A I
Sbjct: 213 TAETVNQLVHPVDKKRKRELLSYLIGSRNLQQVLVFAKTRQSTEALANELKLDGLKAEAI 272
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +Q R L FK+GE +L+ TDVA+RGLDIPS+D V NY++P +DYIHR+GR
Sbjct: 273 HGEKTQGARNRVLEGFKSGEVRVLVATDVAARGLDIPSLDTVFNYELPHQPEDYIHRIGR 332
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPE 342
T RAG+ G+AISLV++ E IE LI +LP+
Sbjct: 333 TGRAGKPGMAISLVSREEEGMLTAIETLIDLRLPQ 367
>gi|339007892|ref|ZP_08640466.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus LMG 15441]
gi|338775095|gb|EGP34624.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus LMG 15441]
Length = 506
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 212/356 (59%), Gaps = 12/356 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIG AQTG+GKT AF +P+++ + + + N VL+PTRELA+Q+SE+
Sbjct: 39 GRDLIGQAQTGTGKTVAFGIPMIEKI-DTSSNH-----IQGIVLAPTRELAVQVSEELIK 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG ++ + GG D+M+Q AL K PH++VATPGRL+DH+ N + L ++ LVLD
Sbjct: 93 LGQYTGIKTLPIYGGQDIMRQIRALKKNPHVIVATPGRLIDHI-NRRTIRLQNIQTLVLD 151
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD +LN F + ++ IL IP RQT LFSATM ++++ L + LKNP KI +K T
Sbjct: 152 EADEMLNMGFIEEIESILEQIPDERQTLLFSATMPRQIESLAQRYLKNPEKITVKAKEVT 211
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V ++Q Y V K K + +L S +VF RT L+ L G A I
Sbjct: 212 VPNIEQVYMEVQEKLKFDVMTRLLDIQSPELAIVFGRTKRRVDELSEALNKRGYSAEGIH 271
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G ++Q+KR L +FK G +IL+ TDVA+RGLDI V V N+DIP + + Y+HR+GRT
Sbjct: 272 GDLTQAKRDSVLRQFKEGTIDILVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRT 331
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRIS 364
RAG+TGVA + V EL+ IE + +K+ P V L E + A+RI+
Sbjct: 332 GRAGKTGVATTFVTSRELDHLRMIEHVTKRKMSRRP-----VPTLTEAIEGAQRIT 382
>gi|410100568|ref|ZP_11295528.1| hypothetical protein HMPREF1076_04706 [Parabacteroides goldsteinii
CL02T12C30]
gi|409215603|gb|EKN08602.1| hypothetical protein HMPREF1076_04706 [Parabacteroides goldsteinii
CL02T12C30]
Length = 428
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/388 (40%), Positives = 216/388 (55%), Gaps = 10/388 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G DL+G AQTG+GKT AF++PI+Q L ++ + V A +L+PTRELAIQI E F A
Sbjct: 38 GYDLLGCAQTGTGKTAAFSIPIIQNLYNERQHGK-VRGIKALILTPTRELAIQIGESFTA 96
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G +R V+ GGV QT AL + +++ATPGRL+D L N SL L Y VLD
Sbjct: 97 YGKYTGVRHTVIFGGVGQKPQTDALERGVDVLIATPGRLLD-LINQGFISLKYLDYFVLD 155
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F + IL ++P+ RQ+ FSATM ++++L L P K+E ST
Sbjct: 156 EADRMLDMGFIHDIKRILPLLPKKRQSLFFSATMPPEIERLAGTILHEPQKVEVTPASST 215
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD + Q FV K L ++L + S S +VFTRT +A +L A I
Sbjct: 216 VDKIDQSVYFVEKAEKVSLLTHLLKDSSLESVLVFTRTKHGADKVARVLAKANIGAEAIH 275
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ+ R AL FK +LI TD+A+RG+D+ + VINY++P + Y+HR+GRT
Sbjct: 276 GNKSQTARQRALTNFKDHTTRVLIATDIAARGIDVDHLSHVINYELPNVPETYVHRIGRT 335
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
RAGR+GVA S + E+ + I+KLIGK++P E E + V E K I
Sbjct: 336 GRAGRSGVAYSFCDAEEVPYLKDIQKLIGKQIPVAGGNEFETADVKAAVAEKKE----AI 391
Query: 369 KDSGNKRRRKGGDEDDDIGRQFGINKKK 396
K +R G D R NKK+
Sbjct: 392 KQESKRRNMFGSKRDGSFWR----NKKR 415
>gi|302878537|ref|YP_003847101.1| DEAD/DEAH box helicase [Gallionella capsiferriformans ES-2]
gi|302581326|gb|ADL55337.1| DEAD/DEAH box helicase domain protein [Gallionella
capsiferriformans ES-2]
Length = 461
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 153/344 (44%), Positives = 209/344 (60%), Gaps = 5/344 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVP--AFFACVLSPTRELAIQISEQF 66
G DL+ AQTG+GKT AFALP+LQ L+ A + + A A +L PTRELAIQ+
Sbjct: 39 GSDLMAGAQTGTGKTAAFALPVLQKLMPFASSSPSPARHAVRALILVPTRELAIQVEASV 98
Query: 67 EALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLV 126
+A LR V+ GGVD+ QT L I+VATPGRL+DH+ K L ++ LV
Sbjct: 99 KAYAKYSHLRSLVVFGGVDIKTQTPHLRAGIEILVATPGRLLDHIEQ-KSVQLNQVQMLV 157
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
LDEADR+L+ F L IL ++PR RQ +FSAT + ++KKL L NP IE A
Sbjct: 158 LDEADRMLDMGFMPDLKRILALLPRQRQNLMFSATFSAEIKKLSAEFLVNPKLIEVARSN 217
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
+T + + Q+ V + K L ++L A T+VFT+T +A L+ G +
Sbjct: 218 ATSENVTQKVYLVGHEEKHALLAHLLRGTGAVQTLVFTKTKLTASRIARQLQREGFASDA 277
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
I G SQ +R+ AL+ FK+G+ +LI TDVA+RGLDI + +VINY+IP+ ++DY+HR+G
Sbjct: 278 IHGDKSQLERMQALDAFKSGKITVLIATDVAARGLDIDQLPVVINYEIPSAAEDYVHRIG 337
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP--EFPAEEE 348
RT RAG GVAISLV E ++ L+IEKLI + E PA E+
Sbjct: 338 RTGRAGAFGVAISLVAPEEEKYLLEIEKLIKCTIQRVELPASEK 381
>gi|393759582|ref|ZP_10348395.1| ATP-dependent RNA helicase [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
gi|393162143|gb|EJC62204.1| ATP-dependent RNA helicase [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
Length = 414
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/339 (42%), Positives = 214/339 (63%), Gaps = 5/339 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT AF+LPIL L+ A + PA A VL+PTRELA Q++E
Sbjct: 4 AGRDVMGAAQTGTGKTAAFSLPILNRLMAHATTSAS-PARHPVRALVLTPTRELADQVAE 62
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
+ LR V+ GGVD+ Q AL + IV+ATPGRL+DH+ + + +L +
Sbjct: 63 SIALYSKSVPLRSTVVFGGVDIGPQKEALRRGVEIVIATPGRLLDHI-DQRTINLSQVSI 121
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F LD I++++P+ RQ LFSAT +K+++KL R L +PV+IE A+
Sbjct: 122 LVLDEADRMLDMGFLPDLDRIVSLLPKNRQGLLFSATFSKEIRKLARTFLNDPVEIEVAA 181
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
+ +T T+ Q + A+ K +V+++ + T+VF+ T LA L G +A
Sbjct: 182 RNATASTVTQVVYPMSAEDKRRAVVHLVKTKKLTQTIVFSNTKIGAGQLARYLEREGIKA 241
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G+ SQ +R+ L+ FK+G ++L+ TDVA+RGLD+ + VIN D+P N++DY+HR
Sbjct: 242 ESIHGNKSQLERMKVLDAFKSGTVDVLVATDVAARGLDVAGMPCVINVDLPYNAEDYVHR 301
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEF 343
+GRT RAG +G AI+L+ E +IEKLIG +P
Sbjct: 302 IGRTGRAGASGEAIALMAPDEEHLLQEIEKLIGNPVPRL 340
>gi|302508367|ref|XP_003016144.1| ATP-dependent RNA helicase, putative [Arthroderma benhamiae CBS
112371]
gi|291179713|gb|EFE35499.1| ATP-dependent RNA helicase, putative [Arthroderma benhamiae CBS
112371]
Length = 528
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 165/407 (40%), Positives = 244/407 (59%), Gaps = 32/407 (7%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA PIL E +A +L+PTRELA+QI EQ +A
Sbjct: 136 GRDCIGGSRTGSGKTVAFAGPILHKWSEDPF------GIYAVILTPTRELALQIFEQVKA 189
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG---FSLGTLKYL 125
+ + SL+ ++ GG DM Q + L +RPHIV+ATPGRL DH+ ++ L ++ +
Sbjct: 190 ISAPQSLKPLLITGGSDMRPQAIGLSQRPHIVIATPGRLADHIKSSGEDTIIGLKRVRMV 249
Query: 126 VLDEADRLLNDDFEKSLDEI---LNVIPRM--RQTYLFSATMTKKVKKLQ---RACLKNP 177
VLDEADRLL L ++ L+ +P RQT LF+AT+T +V+ L+ RA K P
Sbjct: 250 VLDEADRLLTSGPGSMLPDVETCLSALPPSSDRQTLLFTATVTPEVRALKSMPRAKNKPP 309
Query: 178 VKI-EAASKYSTVD-TLKQQYRFVPAKYKDCYLVYILTEV--SASSTMVFTRTCDATRLL 233
+ + E +++ +T+ TLKQ Y VP +++ +L +L+ S+ ST++F LL
Sbjct: 310 IFVTEISTENTTIPPTLKQTYLQVPLNHREAFLHVLLSTEGNSSKSTIIFCNRTKTADLL 369
Query: 234 ALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYD 293
+LR L R + + QS+R+ L++F+A +L+ TDVA+RGLDIPSV +VINYD
Sbjct: 370 ERILRRLSHRVTSLHSLLPQSERVANLSRFRASAARLLVATDVAARGLDIPSVGLVINYD 429
Query: 294 IPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLL 353
+P N DYIHRVGRTARAGR G AI+LV Q +++ L IE +GK++ + EE V +
Sbjct: 430 VPRNPDDYIHRVGRTARAGREGEAITLVGQRDVQLVLAIEARVGKQMVAW--EEPGVNI- 486
Query: 354 LERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQ-FGINKKKLSK 399
E++ + +K+ G+ +R G+ D+ GR G +KL K
Sbjct: 487 -----ESRIVKGTVLKEVGSTKREAMGEIDE--GRDVLGRRVRKLKK 526
>gi|260223394|emb|CBA33917.1| Putative ATP-dependent RNA helicase rhlE [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 520
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/336 (44%), Positives = 204/336 (60%), Gaps = 6/336 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
GKD++G AQTG+GKT AFALP+LQ L++ EN T PA A VL PTRELA Q+++Q
Sbjct: 59 GKDVMGAAQTGTGKTAAFALPLLQRLMK-HENASTSPARHPVRALVLLPTRELADQVAQQ 117
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+ +LR AV+ GG+DM QTL L ++VATPGRL+DH+ K L ++Y+
Sbjct: 118 VKLYAKYTNLRSAVVFGGMDMKPQTLELKAGVEVLVATPGRLLDHI-EAKNAVLNQVEYV 176
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L+NP+ IE A
Sbjct: 177 VLDEADRMLDIGFLPDLQRILSYLPKTRTTLLFSATFSPEIKRLANSYLQNPITIEVARS 236
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T T++Q + V K L+ I+ VF + L L G RA
Sbjct: 237 NATASTVEQHFYRVNDDDKRHALLQIVRSKDIKQAFVFVNSKLGCARLTRALERDGLRAA 296
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL FK GE ++L+CTDVA+RGLDI V V N DIP N++DY+HR+
Sbjct: 297 ALHGDKSQDERLKALEAFKKGEVDLLVCTDVAARGLDIKDVPAVFNMDIPFNAEDYVHRI 356
Query: 306 GRTARAGRTGVAISLV-NQYELEWYLQIEKLIGKKL 340
GRT RAG +G+A+S V + IEKLI K+
Sbjct: 357 GRTGRAGASGLAVSFVGGGNDARLVADIEKLIKTKI 392
>gi|325104041|ref|YP_004273695.1| DEAD/DEAH box helicase [Pedobacter saltans DSM 12145]
gi|324972889|gb|ADY51873.1| DEAD/DEAH box helicase domain protein [Pedobacter saltans DSM
12145]
Length = 451
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/342 (42%), Positives = 203/342 (59%), Gaps = 6/342 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
KDL+G AQTG+GKT AFA+PILQ L E + A +++PTRELAIQI + F
Sbjct: 40 KDLLGCAQTGTGKTAAFAIPILQLLDEDLKKNHQKNTIKALIVTPTRELAIQIGDSFSDY 99
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
G + L+ AV+ GGV+ Q AL K I+VATPGRL+D L + K SL + VLDE
Sbjct: 100 GKNLRLKHAVIFGGVNQKSQVDALQKGVDILVATPGRLLD-LMHQKHLSLKHINLFVLDE 158
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADR+L+ F + +I+ V+P+ RQ+ FSATM ++KL LK+PVK+E ST
Sbjct: 159 ADRMLDMGFINDVKKIIAVLPQHRQSLFFSATMPPVIQKLSEEILKSPVKVEVTPVSSTA 218
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
DT+ Q FV K+ L++IL + S +VFTRT + L ++ I G
Sbjct: 219 DTINQTVFFVDKNNKNDLLLHILKDQLLDSVLVFTRTKHGADRVVKTLAKQHIKSAAIHG 278
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+ SQ+ R AL+ FK +L+ TD+A+RG+DI S+ VINY+IP + Y+HR+GR+
Sbjct: 279 NKSQNARQRALDDFKTKAIRVLVATDIAARGIDIDSLKYVINYEIPNIPETYVHRIGRSG 338
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLP-----EFPAE 346
RAG G+AIS + E + IEK+IGK +P FP E
Sbjct: 339 RAGAEGIAISFCDVDEKPFLKDIEKIIGKSVPLGEDNPFPME 380
>gi|327307374|ref|XP_003238378.1| ATP-dependent RNA helicase DBP8 [Trichophyton rubrum CBS 118892]
gi|326458634|gb|EGD84087.1| ATP-dependent RNA helicase DBP8 [Trichophyton rubrum CBS 118892]
Length = 528
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 166/407 (40%), Positives = 244/407 (59%), Gaps = 32/407 (7%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA PIL + +E+ V +A +L+PTRELA+QI EQ +A
Sbjct: 136 GRDCIGGSRTGSGKTVAFAAPILH---KWSEDPFGV---YAVILTPTRELALQIFEQVKA 189
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG---FSLGTLKYL 125
+ + SL+ ++ GG DM Q + L +RPHIV+ATPGRL DH+ ++ L ++ +
Sbjct: 190 ISAPQSLKPLLITGGSDMRPQAIGLSQRPHIVIATPGRLADHIKSSGEDTIIGLKRVRMV 249
Query: 126 VLDEADRLLNDDFEKSLDEI---LNVIPRM--RQTYLFSATMTKKVKKLQ---RACLKNP 177
VLDEADRLL L ++ L+ +P RQT LF+AT+T +V+ L+ RA K P
Sbjct: 250 VLDEADRLLTSGPGSMLPDVETCLSALPPSSDRQTLLFTATVTPEVRALKSMPRAKNKLP 309
Query: 178 VKIEAASKYSTV--DTLKQQYRFVPAKYKDCYLVYILTE--VSASSTMVFTRTCDATRLL 233
+ + S +T TLKQ Y VP +++ +L +L+ S+ ST++F LL
Sbjct: 310 IFVSEISTENTTIPPTLKQTYLQVPLNHREAFLHVLLSTGGNSSKSTIIFCNRTKTADLL 369
Query: 234 ALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYD 293
+LR L R + + QS+R+ L++F+A +L+ TDVA+RGLDIPSV +VINYD
Sbjct: 370 ERILRRLSHRVTSLHSLLPQSERVANLSRFRASAARLLVATDVAARGLDIPSVGLVINYD 429
Query: 294 IPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLL 353
+P N DYIHRVGRTARAGR G AI+LV Q +++ L IE +GK++ + EE V +
Sbjct: 430 VPRNPDDYIHRVGRTARAGREGEAITLVGQRDVQLVLAIEARVGKQMVAW--EEPGVNI- 486
Query: 354 LERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQ-FGINKKKLSK 399
E++ + +K+ G+ +R G+ D+ GR G +KL K
Sbjct: 487 -----ESRIVKGTVLKEVGSTKREAMGEIDE--GRDVLGRRVRKLKK 526
>gi|383759970|ref|YP_005438956.1| ATP-dependent RNA helicase RhlE [Rubrivivax gelatinosus IL144]
gi|381380640|dbj|BAL97457.1| ATP-dependent RNA helicase RhlE [Rubrivivax gelatinosus IL144]
Length = 485
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 145/342 (42%), Positives = 208/342 (60%), Gaps = 5/342 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT AF +P+LQ +L EN PA A VL+PTRELA Q++
Sbjct: 62 AGRDVMGAAQTGTGKTAAFTIPLLQKMLR-HENTSMSPARHPVRALVLAPTRELADQVAA 120
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
+ LR AV+ GGVDM QTL L +++ATPGRL+DH+ K L ++Y
Sbjct: 121 NVKTYAKHTRLRSAVVFGGVDMKPQTLELKAGVEVLIATPGRLLDHI-EAKNAVLNQVEY 179
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
+VLDEADR+L+ F L IL+ +P+ RQT LFSAT + ++K+L + L+ PV +E A
Sbjct: 180 VVLDEADRMLDIGFLPDLQRILSYLPKARQTLLFSATFSPEIKRLAGSYLQEPVTVEVAR 239
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
+T T++Q++ V K + IL + S +VF + LA G +
Sbjct: 240 PNATASTVEQRFYGVSDDDKRATVRQILRQRELSQAIVFVNSKLGAARLARSFERDGLKT 299
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
+ G SQ +RL AL FKAGE ++L+ TDVA+RGLDI + V N+D+P N++DY+HR
Sbjct: 300 QALHGDKSQDERLKALAAFKAGEVDLLVATDVAARGLDIADLPAVFNFDVPFNAEDYVHR 359
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAE 346
+GRT RAG +G+A++L+ + + IEKLI KK+ P E
Sbjct: 360 IGRTGRAGASGLAVTLITRDDTRLVSDIEKLIKKKIEVEPFE 401
>gi|147808007|emb|CAN66431.1| hypothetical protein VITISV_041393 [Vitis vinifera]
Length = 199
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 130/158 (82%), Positives = 140/158 (88%), Gaps = 6/158 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDLIGLAQTGSGKTGAFALPILQALL+ T FACVLSPTRELAIQI+EQFEA
Sbjct: 46 GKDLIGLAQTGSGKTGAFALPILQALLD------TPQVLFACVLSPTRELAIQIAEQFEA 99
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI L+CAVLVGGVD QQ +AL KRPHIVV TPGRLMDHL+NTKGFSL T+KYLVLD
Sbjct: 100 LGSGIGLKCAVLVGGVDHTQQAIALAKRPHIVVGTPGRLMDHLSNTKGFSLRTMKYLVLD 159
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKV 166
EADRLLNDDFEK++DEIL+VIPR R+TYLFSATMTKKV
Sbjct: 160 EADRLLNDDFEKAIDEILSVIPRERKTYLFSATMTKKV 197
>gi|119605167|gb|EAW84761.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49, isoform CRA_d [Homo
sapiens]
Length = 376
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 202/335 (60%), Gaps = 17/335 (5%)
Query: 84 VDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDEADRLLND---DFEK 140
+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LV+DEADRLL DF
Sbjct: 1 MDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTV 60
Query: 141 SLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVP 200
L+ IL +P RQT LFSAT+T +++LQ P EA + STV+ L Q+Y VP
Sbjct: 61 DLEAILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVP 120
Query: 201 AKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKR 256
K KD YLV+++ E S ++FT TC ++L +MLR + + M Q +R
Sbjct: 121 EKVKDAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKER 180
Query: 257 LGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGV 316
AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K YIHRVGRTARAGR G
Sbjct: 181 FAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQ 240
Query: 317 AISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI-------K 369
AI+LV QY++ IE+ I KKL EF EE EVL +L +V +R ++ + K
Sbjct: 241 AITLVTQYDIHLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKLEAAHFDEK 300
Query: 370 DSGNKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
NKR++ +G D D + R+ + K K R+
Sbjct: 301 KEINKRKQLILEGKDPDLEAKRKAELAKIKQKNRR 335
>gi|70999626|ref|XP_754530.1| ATP dependent RNA helicase (Dbp8) [Aspergillus fumigatus Af293]
gi|74674345|sp|Q4WXW1.1|DBP8_ASPFU RecName: Full=ATP-dependent RNA helicase dbp8
gi|66852167|gb|EAL92492.1| ATP dependent RNA helicase (Dbp8), putative [Aspergillus fumigatus
Af293]
Length = 526
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 164/397 (41%), Positives = 236/397 (59%), Gaps = 36/397 (9%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AF++P+LQ E F VL+PTRELA+QI EQ +A
Sbjct: 133 GRDCIGGSRTGSGKTIAFSVPMLQKWAEDPF------GIFGVVLTPTRELALQIFEQIKA 186
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YL 125
+ + S++ ++ GG DM Q +AL RPH+V+ATPGRL DH+ ++ ++ LK +
Sbjct: 187 ISAPQSMKPVLITGGTDMRPQAIALAGRPHVVIATPGRLADHIKSSGEDTVCGLKRVRMV 246
Query: 126 VLDEADRLLNDDFEKSLDEI---LNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKNP 177
VLDEADRLL L ++ L+ +P RQT LF+AT+T +V+ L+ R+ K P
Sbjct: 247 VLDEADRLLASGPGSMLPDVETCLSALPPSSERQTLLFTATVTPEVRALKNMPRSANKPP 306
Query: 178 V---KIEAASKYSTVDTLKQQYRFVPAKYKDCYL-VYILTEVSAS-STMVFTRTCDATRL 232
V +I ++ + TLKQ Y VP +++ +L V + TE +AS +VF L
Sbjct: 307 VFVTEISTENQGTIPPTLKQTYLKVPLTHREAFLHVLLSTEGNASKPAIVFCNHTKTADL 366
Query: 233 LALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINY 292
L MLR L R + + QS+R L +F+A IL+ TDVASRGLDIP+V +VINY
Sbjct: 367 LERMLRRLSHRVTSLHSLLPQSERNANLARFRASAARILVATDVASRGLDIPTVSLVINY 426
Query: 293 DIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL 352
D+P N DY+HRVGRTARAGR G A++LV Q +++ L IE+ +G+++ E+ EE V +
Sbjct: 427 DVPRNPDDYVHRVGRTARAGRRGEAVTLVGQRDVQLVLAIEERVGRQMEEW--SEEGVSI 484
Query: 353 --------LLERVTEAKRISQMTIKDS----GNKRRR 377
L+ V EAKR + + I + G KR +
Sbjct: 485 EGRLVRTGALKEVGEAKREAMVEIDEGRDVLGRKRNK 521
>gi|329906289|ref|ZP_08274385.1| ATP-dependent RNA helicase [Oxalobacteraceae bacterium IMCC9480]
gi|327547309|gb|EGF32148.1| ATP-dependent RNA helicase [Oxalobacteraceae bacterium IMCC9480]
Length = 504
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 150/342 (43%), Positives = 205/342 (59%), Gaps = 8/342 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT F+LPI+Q LL A N + PA A +L+PTRELA Q++E
Sbjct: 53 GRDVMGAAQTGTGKTAGFSLPIIQLLLANASNSAS-PARHPVRALILTPTRELADQVAEN 111
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+A LR V+ GG+DM QT AL IV+ATPGRL+DH+ K +L + L
Sbjct: 112 VKAYCRHTPLRSTVVFGGMDMAPQTAALRAGVEIVIATPGRLLDHVQQ-KTLNLSQTQIL 170
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
V+DEADR+L+ F L I+N++P+ RQ +FSAT + ++KKL + L NPV IE A
Sbjct: 171 VMDEADRMLDMGFLPDLQRIINLLPKKRQNLMFSATFSGEIKKLASSFLDNPVTIEVARS 230
Query: 186 YSTVDTLKQQ-YRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
T D + Q Y+ K + +++ +VF+ T LA L G +A
Sbjct: 231 NQTADRVTQVVYKVDSDDAKRDIVAHLIRGRQLKQVLVFSNTKIGASRLARELEKGGVKA 290
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G +QS+R+ AL FK GE ++L+ TDVA+RGLDI + VINYD+P N++DY+HR
Sbjct: 291 SAIHGDKTQSERMAALEAFKGGEIDVLVATDVAARGLDISDLPCVINYDLPYNAEDYVHR 350
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAE 346
+GRT RAG +G AISL + L IEKLI K PAE
Sbjct: 351 IGRTGRAGASGDAISLFTTKDERLLLDIEKLINHKF--VPAE 390
>gi|315606927|ref|ZP_07881933.1| ATP-dependent RNA helicase RhlE [Prevotella buccae ATCC 33574]
gi|315251308|gb|EFU31291.1| ATP-dependent RNA helicase RhlE [Prevotella buccae ATCC 33574]
Length = 375
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 141/333 (42%), Positives = 207/333 (62%), Gaps = 2/333 (0%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DL+G+AQTG+GKT AFA+PI+Q L + A++ R A +L+PTRELAIQI E F+
Sbjct: 38 GRDLLGIAQTGTGKTAAFAIPIIQQLAKSADDNRRR-DIKALILTPTRELAIQIEECFKD 96
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LRC V+ GGV Q L + I++ATPGRL+D L + +L +++ VLD
Sbjct: 97 YSKFTRLRCCVIFGGVSQNGQVKELERGVDILIATPGRLLD-LISQHIITLEHIRHFVLD 155
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F + +++ ++P+ RQT LFSATM + + KL ++ L P ++E A S
Sbjct: 156 EADRMLDMGFIHDIKKLIPLLPKRRQTLLFSATMPETIAKLSKSLLYKPARVEVAPVSSV 215
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDT++Q+ FV K LV +L S +VF+RT +A L+ I
Sbjct: 216 VDTIEQRLYFVEKPQKTDLLVSVLKNDGNRSALVFSRTKHGADRIARKLKARHIECEAIH 275
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ+ R AL FK+G+ +++ TD+A+RG+DI ++ MVINYD+P ++ Y+HR+GRT
Sbjct: 276 GNKSQNARQRALTNFKSGKTRVIVATDIAARGIDIANLQMVINYDLPDVAETYVHRIGRT 335
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
RAG +GVA++ Q E I+KL GKKLP
Sbjct: 336 GRAGNSGVALTFCTQEERPMVRDIQKLTGKKLP 368
>gi|421871323|ref|ZP_16302945.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus GI-9]
gi|372459950|emb|CCF12494.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus GI-9]
Length = 506
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 212/356 (59%), Gaps = 12/356 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIG AQTG+GKT AF +P+++ + + + N VL+PTRELA+Q+SE+
Sbjct: 39 GRDLIGQAQTGTGKTVAFGIPMIEKI-DTSSNH-----IQGIVLAPTRELAVQVSEELIK 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG ++ + GG D+M+Q AL K PH++VATPGRL+DH+ N + L ++ LVLD
Sbjct: 93 LGQYTGIKTLPIYGGQDIMRQIRALKKNPHVIVATPGRLIDHI-NRRTIRLQNIQTLVLD 151
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD +LN F + ++ IL IP RQT LFSATM ++++ L + LKNP KI +K T
Sbjct: 152 EADEMLNMGFIEEIESILEQIPDERQTLLFSATMPRQIESLAQRYLKNPEKITVKAKEVT 211
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V ++Q Y V K K + +L S +VF RT L+ L G A I
Sbjct: 212 VPNIEQVYMEVQEKLKFDVMTRLLDIQSPELAIVFGRTKRRVDELSEALNKRGYSAEGIH 271
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G ++Q+KR L +FK G +IL+ TDVA+RGLDI V V N+DIP + + Y+HR+GRT
Sbjct: 272 GDLTQAKRDSVLRQFKEGTIDILVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRT 331
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRIS 364
RAG+TGVA + V E++ IE + +K+ P V L E + A+RI+
Sbjct: 332 GRAGKTGVATTFVTSREIDHLRMIEHVTKRKMSRRP-----VPTLTEAIEGAQRIT 382
>gi|365097957|ref|ZP_09331724.1| DEAD/DEAH box helicase domain-containing protein [Acidovorax sp.
NO-1]
gi|363413202|gb|EHL20410.1| DEAD/DEAH box helicase domain-containing protein [Acidovorax sp.
NO-1]
Length = 505
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/335 (42%), Positives = 205/335 (61%), Gaps = 5/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF+LP+LQ LL+ E+ T PA A VL PTRELA Q+++Q
Sbjct: 40 GQDVMGAAQTGTGKTAAFSLPLLQRLLK-HESSSTSPARHPVRALVLLPTRELADQVAQQ 98
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
LR V+ GG+DM QT+ L K ++VATPGRL+DH+ K L ++Y+
Sbjct: 99 IALYAKYTKLRSTVVFGGMDMKPQTIELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYV 157
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L+NPV IE A
Sbjct: 158 VLDEADRMLDIGFLPDLQRILSFLPKQRTTLLFSATFSPEIKRLASSYLQNPVTIEVARP 217
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
T T++Q++ K + +L +F + LA L G +
Sbjct: 218 NETASTVEQRFYSAGDDDKRRAIHQVLKSRGIKQAFIFVNSKLGCARLARSLEREGLKTT 277
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL FK+GE ++L+CTDVA+RGLDI V V N+D+P N++DY+HR+
Sbjct: 278 ALHGDKSQDERLKALEAFKSGEVDLLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRI 337
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
GRT RAG +G+A++LV+ + IEKLI KK+
Sbjct: 338 GRTGRAGASGLAVTLVSGSDARLVADIEKLIKKKI 372
>gi|266619246|ref|ZP_06112181.1| ATP-dependent RNA helicase RhlE [Clostridium hathewayi DSM 13479]
gi|288869241|gb|EFD01540.1| ATP-dependent RNA helicase RhlE [Clostridium hathewayi DSM 13479]
Length = 432
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/334 (42%), Positives = 204/334 (61%), Gaps = 1/334 (0%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKD++G AQTG+GKT AFALPI+Q L+ ++ + + + +L+PTRELA+QI+E F+
Sbjct: 37 AGKDVLGCAQTGTGKTAAFALPIIQNLMRPSDKKHSKRVIRSLILTPTRELALQIAENFK 96
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
GS +RCAV+ GGV + Q L + I+VATPGRL D L + SL ++ VL
Sbjct: 97 EYGSHTPVRCAVIFGGVSAVPQIKELQRGIDILVATPGRLND-LIHQGEISLSHVEMFVL 155
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L+ F + +I++++P +QT LFSATM +++ L L NP +E S
Sbjct: 156 DEADRMLDMGFIHDVKKIISLLPVKKQTLLFSATMPPEIQALTEKLLHNPAVVEVTPVSS 215
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
VD ++ +V + K LV++L + +ST+VFTRT +A L A I
Sbjct: 216 IVDLIEDSLYYVDKENKRALLVHLLKREAITSTLVFTRTKHGADRMAKFLTKNRINAAAI 275
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G SQ R AL++FKAG +L TD+A+RG+DI + VIN+D+P + Y+HR+GR
Sbjct: 276 HGDKSQGARQKALSQFKAGTVRVLAATDIAARGIDIEELSCVINFDLPNVPETYVHRIGR 335
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
T RAG G AIS + E + IEKLIGKK+P
Sbjct: 336 TGRAGLGGRAISFSDIEEKAYVEDIEKLIGKKIP 369
>gi|409399600|ref|ZP_11249870.1| ATP-dependent RNA helicase [Acidocella sp. MX-AZ02]
gi|409131219|gb|EKN00931.1| ATP-dependent RNA helicase [Acidocella sp. MX-AZ02]
Length = 414
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 136/333 (40%), Positives = 210/333 (63%), Gaps = 3/333 (0%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D++G+AQTG+GKT AFALP++ A+ + ++R + A VL+PTRELA+QI ++ +
Sbjct: 43 AGRDVLGIAQTGTGKTAAFALPMINAMTDRLHSKRF--STRALVLAPTRELAVQIEQEIK 100
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
+G+ LR ++VGGV Q + + IVV PGR++D L NT+ + ++ VL
Sbjct: 101 KFAAGLGLRTVLIVGGVSRFGQVQRMMRGADIVVGCPGRVVD-LMNTRELVIDQCQFFVL 159
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L+ F + +++NV+P RQ+ LFSATM ++ KL L+ PV++E + S
Sbjct: 160 DEADRMLDLGFMPDIRKVVNVLPARRQSALFSATMPAEIAKLANGLLREPVRVEIEAVAS 219
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
T ++Q F K L+ +L + S T+VFTRT +ALML + A +
Sbjct: 220 TPSRIEQSVYFAEGPEKRNLLIKLLHQPEFSKTVVFTRTKRGADRVALMLNSSKISAAAL 279
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G++SQ++R AL+ FKAGE L+ TD+A+RG+D+ +V VIN+++P + Y+HR+GR
Sbjct: 280 HGNLSQNQRQRALDAFKAGEVRALVATDIAARGIDVNAVSHVINFELPNEPESYVHRIGR 339
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
TAR G GVA++ + EL + QIEKL G K+
Sbjct: 340 TARNGADGVAVAFCDATELPYLTQIEKLTGIKM 372
>gi|377820266|ref|YP_004976637.1| DEAD/DEAH box helicase [Burkholderia sp. YI23]
gi|357935101|gb|AET88660.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. YI23]
Length = 496
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 164/403 (40%), Positives = 225/403 (55%), Gaps = 21/403 (5%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 53 AGRDVMGAAQTGTGKTASFSLPIIQRLLPSA-NTSASPARHPVRALMLTPTRELADQVAA 111
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
+ LR V+ GGVDM Q+ AL + I++ATPGRL+DH+ K +LG ++
Sbjct: 112 NVQTYSKHTPLRSTVVFGGVDMNPQSDALRRGVEILIATPGRLLDHVQQ-KTVNLGQVQM 170
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 171 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVAR 230
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
ST ++Q V K + ++ E +VF + LA +L G A
Sbjct: 231 SNSTATNVRQIVFEVHESDKSGAVAQLIRERELKQVIVFCNSKIGASRLARVLEKDGIVA 290
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQS+R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 291 TAIHGDRSQSERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 350
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLER--VTEAKR 362
+GRT RAG +G A+SL + E + IEKLI + L E EV + R T A R
Sbjct: 351 IGRTGRAGASGDALSLCSANERKQLADIEKLIKRPL---EVEPLEVTMRARRDGATSAPR 407
Query: 363 ISQ-----------MTIKDSGNKRRRKGGDEDDDIGRQFGINK 394
+ +D RRR D GRQ I++
Sbjct: 408 RDERFGRSERAEHRHGSRDEAGSRRRTASTHDRPRGRQQPIDE 450
>gi|355621610|ref|ZP_09046211.1| hypothetical protein HMPREF1020_00290 [Clostridium sp. 7_3_54FAA]
gi|354823417|gb|EHF07748.1| hypothetical protein HMPREF1020_00290 [Clostridium sp. 7_3_54FAA]
Length = 477
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 153/387 (39%), Positives = 225/387 (58%), Gaps = 15/387 (3%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D++G AQTG+GKT AFALPI+Q L++ +E + + + +L+PTRELA+QI+E F+
Sbjct: 37 AGRDVLGCAQTGTGKTAAFALPIIQNLMKPSEKKYSKRVIRSLILTPTRELALQIAENFK 96
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLV 126
GS S+RCAV+ GGV Q L + I+VATPGRL D + +GF L ++ V
Sbjct: 97 EYGSRTSVRCAVIFGGVSANPQIEELRRGIDILVATPGRLNDLVG--QGFVDLAHVEIFV 154
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
LDEADR+L+ F + +I++++P +QT LFSATM +++ L L NP ++E
Sbjct: 155 LDEADRMLDMGFIHDVRKIISLLPVRKQTLLFSATMPAEIQALTDKLLHNPARVEVTPVS 214
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRT-CDATRLLALMLRNLGQRAI 245
STVD + +V + K LVY+L +ST+VFTRT A R+ +++N A
Sbjct: 215 STVDIIDASLYYVDKENKRSLLVYLLNHEDITSTLVFTRTKHGADRVAKFLVKNRISAAA 274
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G SQ R AL+ FK+GE +L+ TD+A+RG+DI + VIN+D+P + Y+HR+
Sbjct: 275 -IHGDKSQGARQTALSHFKSGEIQVLVATDIAARGIDIEELSCVINFDLPNIPETYVHRI 333
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP----------EFPAEEEEVLLLLE 355
GRT RAG G AIS + E + IEKL GK +P F +E
Sbjct: 334 GRTGRAGLGGRAISFSDIEEKAYVKDIEKLTGKAIPVVDTHPYPMAVFAVPPKETKPRPS 393
Query: 356 RVTEAKRISQMTIKDSGNKRRRKGGDE 382
RVT + T SG++ +++ +
Sbjct: 394 RVTAKSSVKSQTKAQSGSQTKKRANTQ 420
>gi|239624536|ref|ZP_04667567.1| DEAD/DEAH box helicase domain-containing protein [Clostridiales
bacterium 1_7_47_FAA]
gi|239520922|gb|EEQ60788.1| DEAD/DEAH box helicase domain-containing protein [Clostridiales
bacterium 1_7_47FAA]
Length = 518
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 160/397 (40%), Positives = 223/397 (56%), Gaps = 10/397 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DL+G AQTG+GKT AFALPI+Q L+E +N++ A +L+PTRELA+QI E E
Sbjct: 38 GQDLLGCAQTGTGKTAAFALPIIQNLMERPKNRQKKKPVRALILTPTRELALQIHENIEE 97
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G+G + AV+ GGV Q +L + I+VATPGRL+D L L ++ VLD
Sbjct: 98 YGAGTPINSAVIFGGVSAKPQIQSLRRGIDILVATPGRLLD-LIGQHEIDLSFVEIFVLD 156
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F + ++ ++P+ RQT LFSATM +++ L L NPVK+E ST
Sbjct: 157 EADRMLDMGFIHDVKRVITLLPKKRQTLLFSATMPDEIQALAAKLLHNPVKVEVTPVSST 216
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD ++ +V K LV++L SST+VFTRT A L G A I
Sbjct: 217 VDLIETSLYYVDKANKWPLLVHLLEHEDVSSTLVFTRTKHGADRGAKYLNKSGITAAAIH 276
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G SQ R AL+ FK+G +L+ TD+A+RG+DI + VIN+D+P + Y+HR+GRT
Sbjct: 277 GDKSQGARQTALSNFKSGRLRVLVATDIAARGIDIEELSCVINFDLPNVPETYVHRIGRT 336
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP-----EFPAEEEEVLLLLERVTEAKRI 363
RAG G AIS + E + IEKL GK + +P E E+ ER + R
Sbjct: 337 GRAGLGGRAISFSDIEEKAYVKDIEKLTGKTIQVIGDHPYPMEVFEIAPKEERNS---RQ 393
Query: 364 SQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKKLSKR 400
++ K +G+ RR K D D R + K S+R
Sbjct: 394 AKGAGKGAGS-RRAKDSRRDTDSKRATDSRRAKDSRR 429
>gi|330817865|ref|YP_004361570.1| ATP-dependent RNA helicase [Burkholderia gladioli BSR3]
gi|327370258|gb|AEA61614.1| Putative ATP-dependent RNA helicase 2 [Burkholderia gladioli BSR3]
Length = 485
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 148/340 (43%), Positives = 205/340 (60%), Gaps = 5/340 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
+G+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 47 SGRDVMGAAQTGTGKTASFSLPIIQRLLPQA-NSSASPARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A +LR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVHAYAKHTALRSAVVFGGVDMNSQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQM 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L NP IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKQRQTLLFSATFSPEIKKLASTYLSNPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
+T + Q + K +V ++ + S +VF + LA L G A
Sbjct: 225 SNATATNVTQVVYEIAEGDKQAAVVKLIRDRSLKQVIVFCNSKIGASRLARQLERDGVVA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQ++R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 TAIHGDRSQNERMQALDAFKRGEVEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFP 344
+GRT RAG +G A+SL + E + IEKLI + LP P
Sbjct: 345 IGRTGRAGASGDALSLCSPNERKQLADIEKLIKRDLPLQP 384
>gi|171685610|ref|XP_001907746.1| hypothetical protein [Podospora anserina S mat+]
gi|170942766|emb|CAP68419.1| unnamed protein product [Podospora anserina S mat+]
Length = 798
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 139/318 (43%), Positives = 196/318 (61%), Gaps = 6/318 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKTGAF +PIL+ LL + V +L+PTRELAIQ
Sbjct: 310 GKDVVGGAVTGSGKTGAFLVPILERLLY---RSKKVATTRVVILAPTRELAIQCHAVGVK 366
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L S ++ + VGG+ + Q L RP +V+ATPGR +DH+ N+ F++ T++ LVLD
Sbjct: 367 LASHTDIKFCLAVGGLSLKVQEQELRLRPDVVIATPGRFIDHMRNSASFAVETVEILVLD 426
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EIL +P+ RQT LFSATMT V +L RA L PV+I+ S+ T
Sbjct: 427 EADRMLEDGFADELNEILTTLPKSRQTMLFSATMTSSVDRLIRAGLNKPVRIQVDSQKKT 486
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
L+Q++ R P + K YLV+I + ++F R ++ LG
Sbjct: 487 ASNLRQEFVRLRPGREKKRMGYLVHICKTLYTERVIIFFRQKKIAHETRIIFGLLGMSCA 546
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G M+Q++R+ ++ F+ G+ N L+ TD+ASRGLDI VD VINY+ P N + YIHR+
Sbjct: 547 ELHGSMNQAQRIASVEAFRDGKVNFLLATDLASRGLDIKGVDTVINYEAPQNLEIYIHRI 606
Query: 306 GRTARAGRTGVAISLVNQ 323
GRTARAGR+GVA++L +
Sbjct: 607 GRTARAGRSGVALTLAAE 624
>gi|351730076|ref|ZP_08947767.1| DEAD/DEAH box helicase domain-containing protein [Acidovorax
radicis N35]
Length = 498
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 143/335 (42%), Positives = 205/335 (61%), Gaps = 5/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF+LP+LQ LL+ E+ T PA A VL PTRELA Q+++Q
Sbjct: 40 GQDVMGAAQTGTGKTAAFSLPLLQRLLK-HESSSTSPARHPVRALVLLPTRELADQVAQQ 98
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
LR V+ GG+DM QT+ L K ++VATPGRL+DH+ K L ++Y+
Sbjct: 99 IALYAKYTKLRSTVVFGGMDMKPQTIELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYV 157
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L+NP+ IE A
Sbjct: 158 VLDEADRMLDIGFLPDLQRILSYLPKQRTTLLFSATFSPEIKRLASSYLQNPITIEVARP 217
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
T T++Q++ K + +L +F + LA L G +
Sbjct: 218 NETASTVEQRFYSANDDDKRRAIHQVLKTRGLKQAFIFVNSKLGCARLARSLEREGLKTT 277
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL FK+GE ++L+CTDVA+RGLDI V V N+D+P N++DY+HR+
Sbjct: 278 ALHGDKSQDERLKALEAFKSGEVDLLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRI 337
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
GRT RAG +G+A++LV+ + IEKLI KK+
Sbjct: 338 GRTGRAGASGLAVTLVSGSDARLVADIEKLIKKKI 372
>gi|396493590|ref|XP_003844093.1| similar to ATP-dependent RNA helicase dbp8 [Leptosphaeria maculans
JN3]
gi|312220673|emb|CBY00614.1| similar to ATP-dependent RNA helicase dbp8 [Leptosphaeria maculans
JN3]
Length = 505
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 168/406 (41%), Positives = 232/406 (57%), Gaps = 52/406 (12%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TG+GKT AF++PILQ E F +++PTRELAIQI EQ +A
Sbjct: 113 GRDCIGGSRTGTGKTVAFSVPILQKWAEDPSG------IFGLIITPTRELAIQIYEQVKA 166
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKY 124
+ + S++ ++ GG D +Q +AL RPHIV+ATPGRL +H+ T G L +++
Sbjct: 167 ISAPQSMKPILVTGGSDQREQAIALASRPHIVIATPGRLAEHI-RTSGEDTICGLRRVRF 225
Query: 125 LVLDEADRLL---NDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKL--QRACLKNP 177
+V DEADRLL L+ L+V+P RQT LF+AT+T++V L Q + P
Sbjct: 226 VVFDEADRLLAPGKGSMLPDLETCLSVLPPKEKRQTLLFTATVTQEVLALKDQPRPGRLP 285
Query: 178 VKIEAASKYSTVDT--------LKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTC 227
+ I S VDT L+Q+Y P +K+CYL +L E S ++F
Sbjct: 286 IFI------SEVDTETLAIPPKLQQKYLQTPVTHKECYLHVLLNTPENLKKSVIIFCNRT 339
Query: 228 DATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVD 287
LL MLR L R + + QS R+G L +F+A IL+ TDVA+RGLDIP V
Sbjct: 340 KTATLLEYMLRLLEHRVTALHSGLKQSDRVGNLARFRAQAARILVATDVAARGLDIPEVG 399
Query: 288 MVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEE 347
+VINYD+P + DYIHRVGRTARAGR G +I+LV Q ++E L IE +GKK+ EF EE
Sbjct: 400 LVINYDVPRDPDDYIHRVGRTARAGRVGTSITLVGQRDVELILAIETRVGKKMEEF--EE 457
Query: 348 EEVLL-------LLERVTEAKRISQMTIKDS---------GNKRRR 377
E V + L VTE KR + ++I++ G +RRR
Sbjct: 458 EGVSVEGRVVRDALRPVTEKKREAMLSIEEGRDVMGKRKVGMQRRR 503
>gi|431792618|ref|YP_007219523.1| DNA/RNA helicase [Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430782844|gb|AGA68127.1| DNA/RNA helicase, superfamily II [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 500
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 140/332 (42%), Positives = 200/332 (60%), Gaps = 7/332 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IG AQTG+GKT AF +P++Q + E +E+ VL+PTRELA+Q++E+
Sbjct: 39 GKDVIGQAQTGTGKTAAFGIPLIQKIAETSED------IQGIVLTPTRELAVQVAEELNK 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+G +R + GG ++ +Q AL KRPHI+VATPGRLMDH+ + L + ++LD
Sbjct: 93 IGQFKGIRTLPIYGGQEIDRQIRALKKRPHIIVATPGRLMDHMRR-RTIRLQNINMVILD 151
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD +LN F + ++ IL IP RQT LFSATM ++++ L + +K+P I K T
Sbjct: 152 EADEMLNMGFVEDIETILQEIPEARQTLLFSATMPRQIQNLAQKFMKDPELISIKGKEVT 211
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V ++Q Y VP K K L +L S +VF RT L+ L G A I
Sbjct: 212 VANIEQDYLEVPEKMKFDVLCRLLDIQSPDLAIVFGRTKSRVDELSEALNKRGYSAEGIH 271
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQSKR + +FK G +L+ TDVA+RGLDI V V N+DIP + + Y+HR+GRT
Sbjct: 272 GDLSQSKRDSVMRQFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRT 331
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
RAG+TG+A++ V E+ IE+L +K+
Sbjct: 332 GRAGKTGLAVTFVTPREIGHLRLIEQLTKRKI 363
>gi|293603664|ref|ZP_06686084.1| ATP-dependent RNA helicase RhlE [Achromobacter piechaudii ATCC
43553]
gi|292817932|gb|EFF76993.1| ATP-dependent RNA helicase RhlE [Achromobacter piechaudii ATCC
43553]
Length = 493
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 147/345 (42%), Positives = 212/345 (61%), Gaps = 9/345 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF +PIL L+ +A N PA A +L+PTRELA Q+ E
Sbjct: 54 GRDVMGAAQTGTGKTAAFTVPILHRLMPLA-NASASPARHPVRALILTPTRELADQVFES 112
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+ LR AV+ GGVD+ Q AL + I+VATPGRL+DH+ K +L + L
Sbjct: 113 VKRYSKQTPLRSAVVFGGVDIGPQKEALRRGCEILVATPGRLLDHVEQ-KNVNLSQVGIL 171
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L+ I+ ++P RQ LFSAT + +++KL R+ L PV+IE A++
Sbjct: 172 VLDEADRMLDMGFLPDLERIIRLLPAQRQGLLFSATFSNEIRKLGRSYLNQPVEIEVAAR 231
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T T+ Q + + K +V+++ +VF+ T T LA L G +A
Sbjct: 232 NATATTITQIAYKMSSDAKRAAVVHLVKSRGLKQVIVFSNTKIGTARLARELERDGVKAE 291
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G +Q+ R+ AL FKAG+ +L+ TDVA+RGLD+ V VINYD+P N++DY+HR+
Sbjct: 292 SIHGDKTQADRMKALEAFKAGDLEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRI 351
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP----EFPAE 346
GRT RAG +G AI+L E + L IEKLI +++P + PA+
Sbjct: 352 GRTGRAGASGEAIALFTPDEERFLLDIEKLIKREVPRGTLDLPAD 396
>gi|323485816|ref|ZP_08091151.1| ATP-dependent RNA helicase RhlE [Clostridium symbiosum WAL-14163]
gi|323400804|gb|EGA93167.1| ATP-dependent RNA helicase RhlE [Clostridium symbiosum WAL-14163]
Length = 458
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 155/404 (38%), Positives = 228/404 (56%), Gaps = 13/404 (3%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D++G AQTG+GKT AFALPI+Q L++ +E + + + +L+PTR+LA+QI+E F+
Sbjct: 49 AGRDVLGCAQTGTGKTAAFALPIIQNLMKPSEKKYSKRVIRSLILTPTRKLALQIAENFK 108
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLV 126
GS S+RCAV+ GGV Q L + I+VATPGRL D + +GF L ++ V
Sbjct: 109 EYGSRTSVRCAVIFGGVSANPQIEELRRGIDILVATPGRLNDLVG--QGFVDLAYVEIFV 166
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
LDEADR+L+ F + +I++++P +QT LFSATM +++ L L NP ++E
Sbjct: 167 LDEADRMLDMGFIHDVKKIISLLPVRKQTLLFSATMPAEIQALTDKLLHNPARVEVTPVS 226
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
STVD + +V + K LVY+L +ST+VFTRT +A L A
Sbjct: 227 STVDIIDASLYYVDKENKRSLLVYLLNHEDITSTLVFTRTKHGADRVAKFLVKNRISAAA 286
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
I G SQ R AL+ FK+GE +L+ TD+A+RG+DI + VIN+D+P + YIHR+G
Sbjct: 287 IHGDKSQGARQTALSHFKSGEIQVLVATDIAARGIDIEELSCVINFDLPNIPETYIHRIG 346
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP----------EFPAEEEEVLLLLER 356
RT RAG G AIS + E + IEKL GK +P F +E R
Sbjct: 347 RTGRAGLDGRAISFSDIEEKAYVKDIEKLTGKAIPVVDTHPYPMAVFVVPPKETKPRPSR 406
Query: 357 VTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKKLSKR 400
VT + T SG++ +++ + + +KKL ++
Sbjct: 407 VTAKSSVKSQTKAQSGSQTKKRANTQSKTPAGKLVNPEKKLRRK 450
>gi|444316946|ref|XP_004179130.1| hypothetical protein TBLA_0B07950 [Tetrapisispora blattae CBS 6284]
gi|387512170|emb|CCH59611.1| hypothetical protein TBLA_0B07950 [Tetrapisispora blattae CBS 6284]
Length = 393
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 151/347 (43%), Positives = 210/347 (60%), Gaps = 19/347 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT AFA P+L E FA +L+PTRELA+QI+EQF A
Sbjct: 43 GRDCIGGAKTGSGKTIAFAGPMLTKWSE------DPCGMFAVILTPTRELAMQIAEQFTA 96
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYL 125
LGS +++R ++VGG ++++Q L L +PH ++ATPGRL H+ + ++G KYL
Sbjct: 97 LGSSMNIRVCLVVGGENIVKQALELQNKPHFIIATPGRLAHHILRSGEDTVGGFIRCKYL 156
Query: 126 VLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACLKN---PV-- 178
VLDEAD LL F K L + +P RQT LF+AT+T +VK LQ A + P+
Sbjct: 157 VLDEADILLTSTFSKDLSVCIGKLPPKEKRQTLLFTATITDQVKVLQDAPKHDGRLPLFS 216
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLAL 235
++E+ K + TLK +Y VP K+ YL ++LT + SS +VF +L
Sbjct: 217 YQVESIDKVAIPSTLKTEYVLVPGHVKEAYLYHLLTCEAYNESSAIVFVNRTVTAEILRR 276
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
L +L R + M Q +R +L++F+A +LI TDVASRGLDIP+V++VINYD+P
Sbjct: 277 TLYDLEVRVTSLHSQMPQQERTNSLHRFRANAARVLIATDVASRGLDIPTVELVINYDLP 336
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPE 342
+ +IHR GRTARAGRTG AIS V ++ IE+ I KK+ E
Sbjct: 337 ADPDTFIHRSGRTARAGRTGDAISFVTPNDISRIQSIEERINKKMSE 383
>gi|423327615|ref|ZP_17305423.1| hypothetical protein HMPREF9711_00997 [Myroides odoratimimus CCUG
3837]
gi|404606267|gb|EKB05825.1| hypothetical protein HMPREF9711_00997 [Myroides odoratimimus CCUG
3837]
Length = 370
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 145/332 (43%), Positives = 202/332 (60%), Gaps = 5/332 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IG AQTG+GKT AFA+PILQ L ++ + + A +L PTRELAIQ+ + F
Sbjct: 38 GKDVIGTAQTGTGKTAAFAIPILQKLHSTPKSTKGIRAL---ILVPTRELAIQVKDSFLD 94
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+ ++L+ L GGV + Q AL + P I+VATPGRL+D L N K L L+ LVLD
Sbjct: 95 YSTELALKTVTLFGGVPLPPQVRALKQHPEIIVATPGRLLD-LINQKIVKLSNLEILVLD 153
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD++L+ F L +IL +P RQ+ FSATM K++++ R + PVKIE A++ T
Sbjct: 154 EADQMLDMGFIHDLKKILKFVPTKRQSLFFSATMPKEIEQFARTIVYKPVKIEVAAEVIT 213
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
T++QQ + K K L IL E + ST+VFTRT L L+ + A+ I
Sbjct: 214 ATTIEQQVYYTEKKDKKALLHTILKE-NTESTLVFTRTKYEANNLVKYLQKVNMVAMAIH 272
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQS R+ AL+ FK + NILI TD+A+RG+DI + VINYDIP + Y+HR+GRT
Sbjct: 273 GNKSQSARVKALDDFKNKKINILIATDIAARGIDISKLPFVINYDIPDKPETYVHRIGRT 332
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
RAG GVA+ + + I++ G K+
Sbjct: 333 GRAGVQGVAMCFCTPEQQKELKDIQRFTGIKM 364
>gi|395763810|ref|ZP_10444479.1| ATP-dependent RNA helicase [Janthinobacterium lividum PAMC 25724]
Length = 515
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 140/335 (41%), Positives = 203/335 (60%), Gaps = 5/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT F+LPI+Q L+ A + + PA A +L+PTRELA+Q++E
Sbjct: 74 GRDVMGAAQTGTGKTAGFSLPIIQLLMAHASSSMS-PARHPVRALILTPTRELAVQVAEN 132
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+A LR V+ GG+DM QT+ L IV+ATPGRL+DH+ K SL ++ L
Sbjct: 133 VKAYAKHTPLRSTVVFGGMDMKPQTVLLRGGVEIVIATPGRLLDHIEQ-KNISLSQVQML 191
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
V+DEADR+L+ F L I+N++P+ RQ +FSAT + ++KKL L +P+ IE A
Sbjct: 192 VMDEADRMLDMGFLPDLQRIINLLPKQRQNLMFSATFSPEIKKLAATFLNDPLTIEVARS 251
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
T D + Q V K + ++L + +VF+ T LA +L G A
Sbjct: 252 NQTADKVTQVVYKVSEDQKHALVAHLLRQRDLKQVIVFSNTKIGASRLARVLEQEGMSAT 311
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G SQ +R+ AL FK GE ++L+ TDVA+RGLDI + VIN+D+P N++DY+HR+
Sbjct: 312 AIHGDKSQQERMAALEAFKKGEIDVLVATDVAARGLDISDLPCVINFDLPYNAEDYVHRI 371
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
GRT RAG +G AIS+ + + IEKLI + +
Sbjct: 372 GRTGRAGASGDAISIYSDKDERLLADIEKLIKQSI 406
>gi|410471840|ref|YP_006895121.1| ATP-dependent RNA helicase [Bordetella parapertussis Bpp5]
gi|408441950|emb|CCJ48450.1| putative ATP-dependent RNA helicase [Bordetella parapertussis Bpp5]
Length = 421
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 147/342 (42%), Positives = 209/342 (61%), Gaps = 9/342 (2%)
Query: 12 LIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEA 68
++G AQTG+GKT AF LPIL L+ +A N PA A +L+PTRELA Q+ E +
Sbjct: 1 MMGAAQTGTGKTAAFTLPILHRLMPLA-NTSASPARHPVRALILTPTRELADQVYESVKR 59
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LR AV+ GGVD+ Q AL + ++VATPGRL+DH+ K +L + LVLD
Sbjct: 60 YSLHTPLRSAVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHVEQ-KNVNLSQVGILVLD 118
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F L+ I+ ++P RQ LFSAT + +++KL R+ L +PV+IE A++ +T
Sbjct: 119 EADRMLDMGFLPDLERIIRLLPAQRQGLLFSATFSNEIRKLGRSYLNHPVEIEVAARNAT 178
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
DT+ Q + K +V+++ +VF+ T T LA L G +A I
Sbjct: 179 ADTVTQIAYQMHGDTKRAAVVHLVKSRGLKQVIVFSNTKIGTARLARQLERDGVKAESIH 238
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +Q R+ AL FKAG+ +L+ TDVA+RGLD+ V VINYD+P N++DY+HR+GRT
Sbjct: 239 GDKTQGDRMKALEAFKAGDLEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRT 298
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP----EFPAE 346
RAG +G AI+L E + L IEKLI +++P E PA+
Sbjct: 299 GRAGASGEAIALFTADEERYLLDIEKLIKRQVPRGKLELPAD 340
>gi|33602957|ref|NP_890517.1| ATP-dependent RNA helicase [Bordetella bronchiseptica RB50]
gi|427815972|ref|ZP_18983036.1| putative ATP-dependent RNA helicase [Bordetella bronchiseptica
1289]
gi|33568588|emb|CAE34346.1| putative ATP-dependent RNA helicase [Bordetella bronchiseptica
RB50]
gi|410566972|emb|CCN24542.1| putative ATP-dependent RNA helicase [Bordetella bronchiseptica
1289]
Length = 423
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 147/342 (42%), Positives = 209/342 (61%), Gaps = 9/342 (2%)
Query: 12 LIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEA 68
++G AQTG+GKT AF LPIL L+ +A N PA A +L+PTRELA Q+ E +
Sbjct: 1 MMGAAQTGTGKTAAFTLPILHRLMPLA-NTSASPARHPVRALILTPTRELADQVYESVKR 59
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LR AV+ GGVD+ Q AL + ++VATPGRL+DH+ K +L + LVLD
Sbjct: 60 YSLHTPLRSAVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHVEQ-KNVNLSQVGILVLD 118
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F L+ I+ ++P RQ LFSAT + +++KL R+ L +PV+IE A++ +T
Sbjct: 119 EADRMLDMGFLPDLERIIRLLPAQRQGLLFSATFSNEIRKLGRSYLNHPVEIEVAARNAT 178
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
DT+ Q + K +V+++ +VF+ T T LA L G +A I
Sbjct: 179 ADTVTQIAYQMHGDTKRAAVVHLVKSRGLKQVIVFSNTKIGTARLARQLERDGVKAESIH 238
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +Q R+ AL FKAG+ +L+ TDVA+RGLD+ V VINYD+P N++DY+HR+GRT
Sbjct: 239 GDKTQGDRMKALEAFKAGDLEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRT 298
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP----EFPAE 346
RAG +G AI+L E + L IEKLI +++P E PA+
Sbjct: 299 GRAGASGEAIALFTADEERYLLDIEKLIKRQVPRGKLELPAD 340
>gi|393787534|ref|ZP_10375666.1| hypothetical protein HMPREF1068_01946 [Bacteroides nordii
CL02T12C05]
gi|392658769|gb|EIY52399.1| hypothetical protein HMPREF1068_01946 [Bacteroides nordii
CL02T12C05]
Length = 422
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 152/334 (45%), Positives = 205/334 (61%), Gaps = 7/334 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDL+G AQTG+GKT AF++PILQ L + + A +L+PTRELAIQI E FEA
Sbjct: 38 GKDLLGCAQTGTGKTAAFSIPILQKLYKTDHRK----GIKALILTPTRELAIQIGECFEA 93
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVL 127
G L+ V+ GGV QT AL I+VATPGRL+D +T +G+ SL TL + VL
Sbjct: 94 YGKYTGLKHTVIFGGVGQKPQTDALRNGVQILVATPGRLLDLIT--QGYISLKTLDFFVL 151
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L+ F + IL ++P+ RQT FSATM +++ L + L +P K+E S
Sbjct: 152 DEADRMLDMGFIHDIRRILKLLPQKRQTLFFSATMPPEIETLANSMLTHPEKVEVTPASS 211
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDT+ Q FV K K L+++L + S S ++FTRT LA +L G RA I
Sbjct: 212 TVDTISQYVYFVEKKEKKDLLLHLLKDQSIESVLIFTRTKHGADKLARILTKSGIRAEAI 271
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G+ SQ+ R AL FK +LI TD+A+RG+D+ + VINY++P + Y+HR+GR
Sbjct: 272 HGNKSQNARQRALTDFKNHTLRVLIATDIAARGIDVDQLSHVINYELPNVPETYVHRIGR 331
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
T RAG G+AIS EL + I+KLIGK +P
Sbjct: 332 TGRAGHEGIAISFCESEELPYLKDIQKLIGKTVP 365
>gi|320582192|gb|EFW96410.1| ATP-dependent RNA helicase, putative [Ogataea parapolymorpha DL-1]
Length = 428
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 156/379 (41%), Positives = 223/379 (58%), Gaps = 23/379 (6%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT AF P+L A+ + F VL+PTRELA+QI++QF A
Sbjct: 39 GRDCIGGAKTGSGKTIAFGAPML------AKWSQDPSGIFGLVLTPTRELAMQIADQFAA 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRL----MDHLTNTKGFSLGTLKY 124
LG+ ++L+ +++GG M Q + + PH ++ATPGRL M++ +G L +KY
Sbjct: 93 LGATVNLKVRLIIGGESMTDQVAMIKENPHFIIATPGRLAHIIMENEDECRG--LKRVKY 150
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRM--RQTYLFSATMTKKVKKLQR---ACLKNPVK 179
LVLDEADRLL D F L +P RQT LF+AT+T V+ L+ A K PV
Sbjct: 151 LVLDEADRLLTDSFTDHLQTCFEALPNSNKRQTLLFTATVTDSVRALKDRPVAPGKQPVF 210
Query: 180 IEAASKYSTV---DTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLA 234
+ TV TL+ Y P K+ L ILT + S+ +VF + +L
Sbjct: 211 LHELDNVDTVKIPSTLRLLYVLAPVVVKESMLHNILTNEDYKESTAIVFVNRSETAEILR 270
Query: 235 LMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDI 294
+LR+L + M QS+R +L++F+AG +L+ TD+ASRGLDIPSV++VIN+DI
Sbjct: 271 RLLRHLEVTTTSLHSEMPQSERTNSLHRFRAGAARVLVATDLASRGLDIPSVELVINFDI 330
Query: 295 PTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL-LL 353
P + DY+HRVGRTARAGR G AIS+V +L L IE +G K+ E P + +V+
Sbjct: 331 PRDPDDYVHRVGRTARAGRKGDAISMVTPNDLSRILAIEDRVGVKMEELPLSDNKVIKQS 390
Query: 354 LERVTEAKRISQMTIKDSG 372
L+ V++AK ++M ++ G
Sbjct: 391 LKAVSKAKIEARMDMEREG 409
>gi|424778096|ref|ZP_18205049.1| ATP-dependent RNA helicase [Alcaligenes sp. HPC1271]
gi|422887089|gb|EKU29499.1| ATP-dependent RNA helicase [Alcaligenes sp. HPC1271]
Length = 414
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 144/339 (42%), Positives = 212/339 (62%), Gaps = 5/339 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT AF+LPIL L+ A + PA A VL+PTRELA Q++E
Sbjct: 4 AGRDVMGAAQTGTGKTAAFSLPILNRLMAHATTSAS-PARHPVRALVLTPTRELADQVAE 62
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
+ LR V+ GGVD+ Q AL + IV+ATPGRL+DH+ + + +L +
Sbjct: 63 SIALYSKSVPLRSTVVFGGVDIGPQKEALRRGVEIVIATPGRLLDHI-DQRTINLSQVSI 121
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F LD I++++P+ RQ LFSAT +K+++KL R L +PV+IE A+
Sbjct: 122 LVLDEADRMLDMGFLPDLDRIVSLLPKNRQGLLFSATFSKEIRKLARNFLNDPVEIEVAA 181
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
+ +T T+ Q + A K + +++ + T+VF+ T LA L G +A
Sbjct: 182 RNATASTVTQVVYPMSADEKRRAVAHLIKTKKLTQTIVFSNTKIGAGQLARYLEREGIKA 241
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G+ SQ +R+ L+ FK+G ++L+ TDVA+RGLD+ + VIN D+P N++DY+HR
Sbjct: 242 ESIHGNKSQLERMKVLDAFKSGSVDVLVATDVAARGLDVAGMPCVINVDLPYNAEDYVHR 301
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEF 343
+GRT RAG +G AI+L+ E +IEKLIG +P
Sbjct: 302 IGRTGRAGASGEAIALMAPDEEHLLQEIEKLIGTSVPRL 340
>gi|186476836|ref|YP_001858306.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia
phymatum STM815]
gi|184193295|gb|ACC71260.1| DEAD/DEAH box helicase domain protein [Burkholderia phymatum
STM815]
Length = 482
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 149/335 (44%), Positives = 205/335 (61%), Gaps = 5/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT +F+LPI+Q LL +A N PA A +L+PTRELA Q++
Sbjct: 48 GRDVMGAAQTGTGKTASFSLPIIQRLLPLA-NTSASPARHPVRALILTPTRELADQVAAN 106
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
++ +LR AV+ GGVDM Q+ L + I++ATPGRL+DH+ K +LG ++ L
Sbjct: 107 VQSYAKHTALRSAVVFGGVDMNPQSAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQML 165
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L ILN++P RQT LFSAT + ++KKL L+NP IE A
Sbjct: 166 VLDEADRMLDMGFLPDLQRILNLLPTERQTLLFSATFSPEIKKLASTYLRNPQTIEVARS 225
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
ST + Q V K +V ++ E S +VF + LA L G A
Sbjct: 226 NSTATNVTQIVYEVAEGDKTGAVVQLIRERSLKQVIVFCNSKIGASRLARQLERDGVVAT 285
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G SQS+R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR+
Sbjct: 286 AIHGDRSQSERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRI 345
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
GRT RAG +G A+SL + E + IEKLI + L
Sbjct: 346 GRTGRAGASGDALSLFSPNERKQLADIEKLIKRPL 380
>gi|412341699|ref|YP_006970454.1| ATP-dependent RNA helicase [Bordetella bronchiseptica 253]
gi|408771533|emb|CCJ56334.1| putative ATP-dependent RNA helicase [Bordetella bronchiseptica 253]
Length = 421
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 147/342 (42%), Positives = 209/342 (61%), Gaps = 9/342 (2%)
Query: 12 LIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEA 68
++G AQTG+GKT AF LPIL L+ +A N PA A +L+PTRELA Q+ E +
Sbjct: 1 MMGAAQTGTGKTAAFTLPILHRLMPLA-NTSASPARHPVRALILTPTRELADQVYESVKR 59
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LR AV+ GGVD+ Q AL + ++VATPGRL+DH+ K +L + LVLD
Sbjct: 60 YSLHTPLRSAVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHVEQ-KNVNLSQVGILVLD 118
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F L+ I+ ++P RQ LFSAT + +++KL R+ L +PV+IE A++ +T
Sbjct: 119 EADRMLDMGFLPDLERIIRLLPAQRQGLLFSATFSNEIRKLGRSYLNHPVEIEVAARNAT 178
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
DT+ Q + K +V+++ +VF+ T T LA L G +A I
Sbjct: 179 ADTVTQIAYQMHGDTKRAAVVHLVKSRGLKQVIVFSNTKIGTARLARQLERDGVKAESIH 238
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +Q R+ AL FKAG+ +L+ TDVA+RGLD+ V VINYD+P N++DY+HR+GRT
Sbjct: 239 GDKTQGDRMKALEAFKAGDLEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRT 298
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP----EFPAE 346
RAG +G AI+L E + L IEKLI +++P E PA+
Sbjct: 299 GRAGASGEAIALFTADEERYLLDIEKLIKRQVPRGKLELPAD 340
>gi|410421448|ref|YP_006901897.1| ATP-dependent RNA helicase [Bordetella bronchiseptica MO149]
gi|408448743|emb|CCJ60428.1| putative ATP-dependent RNA helicase [Bordetella bronchiseptica
MO149]
Length = 421
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 147/342 (42%), Positives = 209/342 (61%), Gaps = 9/342 (2%)
Query: 12 LIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEA 68
++G AQTG+GKT AF LPIL L+ +A N PA A +L+PTRELA Q+ E +
Sbjct: 1 MMGAAQTGTGKTAAFTLPILHRLMPLA-NTSASPARHPVRALILTPTRELADQVYESVKR 59
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LR AV+ GGVD+ Q AL + ++VATPGRL+DH+ K +L + LVLD
Sbjct: 60 YSLHTPLRSAVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHVEQ-KNVNLSQVGILVLD 118
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F L+ I+ ++P RQ LFSAT + +++KL R+ L +PV+IE A++ +T
Sbjct: 119 EADRMLDMGFLPDLERIIRLLPAQRQGLLFSATFSNEIRKLGRSYLNHPVEIEVAARNAT 178
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
DT+ Q + K +V+++ +VF+ T T LA L G +A I
Sbjct: 179 ADTVTQIAYQMHGDTKRAAVVHLVKSRGLKQVIVFSNTKIGTARLARQLERDGVKAESIH 238
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +Q R+ AL FKAG+ +L+ TDVA+RGLD+ V VINYD+P N++DY+HR+GRT
Sbjct: 239 GDKTQGDRMKALEAFKAGDLEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRT 298
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP----EFPAE 346
RAG +G AI+L E + L IEKLI +++P E PA+
Sbjct: 299 GRAGASGEAIALFTADEERYLLDIEKLIKRQVPRGKLELPAD 340
>gi|229828479|ref|ZP_04454548.1| hypothetical protein GCWU000342_00541 [Shuttleworthia satelles DSM
14600]
gi|229793073|gb|EEP29187.1| hypothetical protein GCWU000342_00541 [Shuttleworthia satelles DSM
14600]
Length = 538
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 140/335 (41%), Positives = 205/335 (61%), Gaps = 6/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG AQTG+GKT AFALP+L L + P A VL+PTRELAIQI + F+
Sbjct: 99 GRDMIGCAQTGTGKTAAFALPVLHKLTLLKR-----PRVRALVLTPTRELAIQIFDNFKK 153
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G + LR L GG Q AL + I+VATPGRL+D + L +++ LVLD
Sbjct: 154 YGRYLHLRTVCLYGGAKRGPQIGALRRGADILVATPGRLLDFMGQDL-VDLSSVEILVLD 212
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F + I+ P RQT +FSATM K+V++L LK+PV+++ +
Sbjct: 213 EADRMLDMGFLPDVSRIVESTPSKRQTLMFSATMEKEVRQLADRMLKDPVQVQVTPENEA 272
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
DT++Q+ F + K + +LT+ + S +VFTRT L+ L+ G ++ I
Sbjct: 273 ADTVEQKLIFSSREDKREIIASLLTDEAVESAIVFTRTKHGADKLSRELKRRGIESVAIH 332
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +Q +R ALN+FK+G+ +++ TDVA+RGLDIP + V NYD+P + YIHR+GRT
Sbjct: 333 GDKTQGQRQDALNRFKSGKVRVMVATDVAARGLDIPKLSHVFNYDVPEEAGAYIHRIGRT 392
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEF 343
RAG +G+AI+L + EL+ ++E+L+ K +PE
Sbjct: 393 GRAGESGIAITLCCEAELDALREVEELLEKPIPEL 427
>gi|423134919|ref|ZP_17122565.1| hypothetical protein HMPREF9715_02340 [Myroides odoratimimus CIP
101113]
gi|371644248|gb|EHO09787.1| hypothetical protein HMPREF9715_02340 [Myroides odoratimimus CIP
101113]
Length = 370
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 145/332 (43%), Positives = 202/332 (60%), Gaps = 5/332 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IG AQTG+GKT AFA+PILQ L ++ + + A +L PTRELAIQ+ + F
Sbjct: 38 GKDVIGTAQTGTGKTAAFAIPILQKLHSTPKSTKGIRAL---ILVPTRELAIQVKDSFLD 94
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+ ++L+ L GGV + Q AL + P I+VATPGRL+D L N K L L+ LVLD
Sbjct: 95 YSTELALKTVTLFGGVPLPPQVRALKQHPEIIVATPGRLLD-LINQKIVKLSNLEILVLD 153
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD++L+ F L +IL +P RQ+ FSATM K++++ R + PVKIE A++ T
Sbjct: 154 EADQMLDMGFIHDLKKILKFVPTKRQSLFFSATMPKEIEQFARTIVYKPVKIEVAAQVIT 213
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
T++QQ + K K L IL E + ST+VFTRT L L+ + A+ I
Sbjct: 214 ATTIEQQVYYTEKKDKKTLLHTILKE-NTESTLVFTRTKYEANNLVKYLQKVNMVAMAIH 272
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQS R+ AL+ FK + NILI TD+A+RG+DI + VINYDIP + Y+HR+GRT
Sbjct: 273 GNKSQSARVKALDDFKNKKINILIATDIAARGIDISKLPFVINYDIPDKPETYVHRIGRT 332
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
RAG GVA+ + + I++ G K+
Sbjct: 333 GRAGVQGVAMCFCTPEQRKELKDIQRFTGIKM 364
>gi|171057308|ref|YP_001789657.1| DEAD/DEAH box helicase [Leptothrix cholodnii SP-6]
gi|170774753|gb|ACB32892.1| DEAD/DEAH box helicase domain protein [Leptothrix cholodnii SP-6]
Length = 479
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 208/335 (62%), Gaps = 5/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF+LP+LQ +L EN PA A VL+PTRELA Q++
Sbjct: 52 GRDVMGAAQTGTGKTAAFSLPLLQKMLR-HENASASPARHPVRALVLAPTRELADQVANN 110
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+ LR + GG+DM QT L + +++ATPGRL+DH+ K L ++Y+
Sbjct: 111 VKTYARHSQLRVTCVFGGIDMAPQTAELKRGVEVLIATPGRLLDHI-QAKNCQLNQVEYV 169
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ RQT LFSAT + ++KKL ++ L++P+ +E A
Sbjct: 170 VLDEADRMLDIGFLPDLQRILSYLPKTRQTLLFSATFSPEIKKLAQSYLQDPLLVEVARP 229
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T ++Q++ V K +++IL E S + +VF + LA G R
Sbjct: 230 NATATNVEQRFYSVTDDDKRRTVLHILRERSITQAIVFVNSKLGAARLARSFERDGLRTS 289
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL+ FK GE ++L+ TDVA+RGLDI + V N+DIP N++DY+HR+
Sbjct: 290 ALHGDKSQDERLKALDAFKRGEVDVLVATDVAARGLDIADLPAVFNFDIPFNAEDYVHRI 349
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
GRT RAG +G+A+SLV+ + IE+LI KK+
Sbjct: 350 GRTGRAGASGLAVSLVSHDDNRLVSDIEQLIKKKI 384
>gi|427825510|ref|ZP_18992572.1| putative ATP-dependent RNA helicase [Bordetella bronchiseptica
Bbr77]
gi|410590775|emb|CCN05868.1| putative ATP-dependent RNA helicase [Bordetella bronchiseptica
Bbr77]
Length = 421
Score = 260 bits (664), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 147/342 (42%), Positives = 209/342 (61%), Gaps = 9/342 (2%)
Query: 12 LIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQFEA 68
++G AQTG+GKT AF LPIL L+ +A N PA A +L+PTRELA Q+ E +
Sbjct: 1 MMGAAQTGTGKTAAFTLPILHRLMPLA-NTSASPARHPVRALILTPTRELADQVYESVKR 59
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LR AV+ GGVD+ Q AL + ++VATPGRL+DH+ K +L + LVLD
Sbjct: 60 YSLHTPLRSAVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHVEQ-KNVNLSQVGILVLD 118
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F L+ I+ ++P RQ LFSAT + +++KL R+ L +PV+IE A++ +T
Sbjct: 119 EADRMLDMGFLPDLERIIRLLPAQRQGLLFSATFSNEIRKLGRSYLNHPVEIEVAARNAT 178
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
DT+ Q + K +V+++ +VF+ T T LA L G +A I
Sbjct: 179 ADTVTQIAYQMHGDTKRAAVVHLVKSRGLKQVIVFSNTKIGTARLARQLERDGVKAESIH 238
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +Q R+ AL FKAG+ +L+ TDVA+RGLD+ V VINYD+P N++DY+HR+GRT
Sbjct: 239 GDKTQGDRMKALEAFKAGDLEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRT 298
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP----EFPAE 346
RAG +G AI+L E + L IEKLI +++P E PA+
Sbjct: 299 GRAGASGEAIALFTADEERYLLDIEKLIKRQVPRGKLELPAD 340
>gi|403217916|emb|CCK72408.1| hypothetical protein KNAG_0K00400 [Kazachstania naganishii CBS
8797]
Length = 432
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 156/385 (40%), Positives = 224/385 (58%), Gaps = 22/385 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G++ IG A+TGSGKT AFA P+L E R A F VL+PTRELA+QI EQ A
Sbjct: 45 GRNCIGGARTGSGKTLAFAGPML------TEWSRDPAALFGVVLTPTRELAVQIHEQLCA 98
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHL-TNTKGFSLGTL----- 122
LG+ +++RCA++VGG D +QQ+L L RPH +VATPGRL H+ ++T +L +L
Sbjct: 99 LGAQLNIRCALVVGGGDFVQQSLELQGRPHFIVATPGRLAHHIISDTPEAALSSLLKRYT 158
Query: 123 KYLVLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQR--ACLKNPV 178
+YLVLDEAD LL F L IL +P R+T LF+AT+T +V +L+ A + N
Sbjct: 159 RYLVLDEADFLLTPTFASDLAVILGALPDKTHRRTLLFTATVTDQVLQLREGDAFVYNAE 218
Query: 179 KIE--AASKYSTVDTLKQQYRFVPAKYKDCYLVYIL--TEVSASSTMVFTRTCDATRLLA 234
A + DTL +Y VP K+ YL +IL E S+ +VF LL
Sbjct: 219 DDSQLAPGRRQLPDTLTAEYLLVPEHVKEAYLYHILVSNEFEDSTAVVFVNRTRTAELLR 278
Query: 235 LMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDI 294
L LG R + M QS+R +L++F+A +L+ TDVA+RGLDIP V +V+NYD+
Sbjct: 279 RTLYQLGVRVTSLHSQMPQSERANSLHRFRARAARVLVATDVAARGLDIPQVSLVVNYDV 338
Query: 295 PTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL-- 352
P++ ++HRVGRTARAGR G ++ V Q +++ IE + + +F + ++
Sbjct: 339 PSDPDTFVHRVGRTARAGRHGESVLFVTQRDVDRLHAIETRVATTIGQFSRVGDTAVIKK 398
Query: 353 LLERVTEAKRISQMTIKDSGNKRRR 377
L + ++AKR + M ++ G RR
Sbjct: 399 SLTQTSKAKRTAMMAMEREGFGERR 423
>gi|408489495|ref|YP_006865864.1| ATP-dependent RNA helicase RhlE [Psychroflexus torquis ATCC 700755]
gi|408466770|gb|AFU67114.1| ATP-dependent RNA helicase RhlE [Psychroflexus torquis ATCC 700755]
Length = 423
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/333 (42%), Positives = 206/333 (61%), Gaps = 3/333 (0%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++ AQTG+GKT F LP+LQ LL R P A +L+PTRELA Q+ + +
Sbjct: 38 GKDVLASAQTGTGKTAGFTLPLLQ-LLSQTPPLRNRP-VRALILTPTRELAAQVHQSVKD 95
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G + LR V+ GGV+ Q L ++VATPGRL+D L N SL ++ LVLD
Sbjct: 96 YGKFVDLRSTVIFGGVNQKSQVSTLRNGVDVLVATPGRLID-LNNQGLLSLAKVEILVLD 154
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F + + +I+ +IP+ RQT LFSAT +++++ L LKNPV +E+ + +T
Sbjct: 155 EADRMLDMGFLRDIKKIMKLIPKQRQTLLFSATFSREIRSLASEFLKNPVSVESTPENTT 214
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ ++QQ V + K L+ +++E + +VF+RT LA L A I
Sbjct: 215 VEAIEQQVYRVAKEKKTDLLIKLISEGNWEQVLVFSRTKHGANKLAKKLEAAKIGAAAIH 274
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ R AL FK+G +L+ TD+ASRGLDIP + V+N+++P S+DY+HR+GRT
Sbjct: 275 GNKSQGARTKALAGFKSGSVKVLVATDIASRGLDIPLLPYVVNFELPNVSEDYVHRIGRT 334
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
RAG +G+A+SLV+ E + IEKLIG K+P
Sbjct: 335 GRAGASGLAVSLVSADETVFLKDIEKLIGDKIP 367
>gi|315055381|ref|XP_003177065.1| ATP-dependent RNA helicase DBP8 [Arthroderma gypseum CBS 118893]
gi|311338911|gb|EFQ98113.1| ATP-dependent RNA helicase DBP8 [Arthroderma gypseum CBS 118893]
Length = 528
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 163/409 (39%), Positives = 247/409 (60%), Gaps = 36/409 (8%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAF--FACVLSPTRELAIQISEQF 66
G+D IG ++TGSGKT AFA PIL ++ + F +A +L+PTRELA+QI EQ
Sbjct: 136 GRDCIGGSRTGSGKTVAFAAPIL--------HKWSADPFGIYAVILTPTRELALQIFEQV 187
Query: 67 EALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG---FSLGTLK 123
+A+ + SL+ ++ GG DM Q + L +RPHIV+ATPGRL DH+ ++ L ++
Sbjct: 188 KAISAPQSLKPLLITGGSDMRPQAIGLSQRPHIVIATPGRLADHIKSSGEDTIIGLKRVR 247
Query: 124 YLVLDEADRLLNDDFEKSLDEI---LNVIPRM--RQTYLFSATMTKKVKKLQ---RACLK 175
+VLDEADRLL L ++ L+ +P RQT LF+AT+T +V+ L+ RA +
Sbjct: 248 MVVLDEADRLLTSGPGSMLPDVETCLSALPASTDRQTLLFTATVTPEVRALKSMPRAKNR 307
Query: 176 NPVKI-EAASKYSTVD-TLKQQYRFVPAKYKDCYLVYILTEV--SASSTMVFTRTCDATR 231
P+ + E +++ +T+ TLKQ Y VP +++ +L +L+ S+ ST++F
Sbjct: 308 PPIFVTEISTENTTIPPTLKQTYLQVPLNHREAFLHVLLSTEGNSSKSTIIFCNRTKTAD 367
Query: 232 LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVIN 291
LL +LR L R + + QS+R+ L++F+A +L+ TDVA+RGLDIPSV +VIN
Sbjct: 368 LLERILRRLSHRVTSLHSLLPQSERIANLSRFRASAARLLVATDVAARGLDIPSVGLVIN 427
Query: 292 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 351
YD+P N DYIHRVGRTARAGR G AI+LV Q +++ + IE +GK++ + EE V
Sbjct: 428 YDVPRNPDDYIHRVGRTARAGREGEAITLVGQRDVQLVMAIEARVGKQMLAW--EEPGVN 485
Query: 352 LLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQ-FGINKKKLSK 399
+ E++ + +K+ G+ +R G+ D+ GR G +KL K
Sbjct: 486 I------ESRIVKGTVLKEVGSTKREAMGEIDE--GRDVLGRRVRKLKK 526
>gi|386002133|ref|YP_005920432.1| ATP-dependent RNA helicase [Methanosaeta harundinacea 6Ac]
gi|357210189|gb|AET64809.1| ATP-dependent RNA helicase, putative [Methanosaeta harundinacea
6Ac]
Length = 418
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/335 (41%), Positives = 205/335 (61%), Gaps = 4/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVP-AFFACVLSPTRELAIQISEQFE 67
G+DL+G+AQTG+GKT AF LP+LQ + E E +RTVP A A VL+PTRELA QI E F
Sbjct: 38 GEDLLGIAQTGTGKTAAFVLPVLQRISE--ERRRTVPGAPRALVLAPTRELAAQIDESFG 95
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
G + A + GGV Q AL + +VATPGRL+D L L +++ VL
Sbjct: 96 TYGQFLQFSHAAVFGGVSQEPQVKALSRGVEALVATPGRLLD-LMEQGHIDLKGIEFFVL 154
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L+ F K + I++ +P+ R + F+ATM++++ +L LK+PV++E A + +
Sbjct: 155 DEADRMLDMGFAKDVHRIVSALPKKRHSLFFAATMSREIGELAGRLLKDPVRVEVAPQAT 214
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
V++++Q+ FV K K+ L+ +L + +VFTRT +A +L G RA I
Sbjct: 215 PVESIEQRIFFVDQKEKNPLLIGLLQQKFLKRVLVFTRTKRRADRVAKVLTRSGIRADAI 274
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +Q++RL AL FKAG +L+ TD+A+RG+D+ + VINYD+P + Y+HR+GR
Sbjct: 275 HGDRTQNQRLAALRGFKAGRLQVLVATDIAARGIDVEDISHVINYDLPNEPESYVHRIGR 334
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPE 342
T RAGR G A S + E + IE+L K+ E
Sbjct: 335 TGRAGRAGTAYSFCSAEERSFLRDIERLTRTKIRE 369
>gi|373109512|ref|ZP_09523790.1| hypothetical protein HMPREF9712_01383 [Myroides odoratimimus CCUG
10230]
gi|423131172|ref|ZP_17118847.1| hypothetical protein HMPREF9714_02247 [Myroides odoratimimus CCUG
12901]
gi|371642665|gb|EHO08224.1| hypothetical protein HMPREF9714_02247 [Myroides odoratimimus CCUG
12901]
gi|371644748|gb|EHO10278.1| hypothetical protein HMPREF9712_01383 [Myroides odoratimimus CCUG
10230]
Length = 370
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/332 (43%), Positives = 201/332 (60%), Gaps = 5/332 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IG AQTG+GKT AFA+PILQ L ++ + + A +L PTRELAIQ+ + F
Sbjct: 38 GKDVIGTAQTGTGKTAAFAIPILQKLHSTPKSTKGIRAL---ILVPTRELAIQVKDSFLD 94
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+ + L+ L GGV + Q AL + P I+VATPGRL+D L N K L L+ LVLD
Sbjct: 95 YSTELPLKTVTLFGGVPLPPQVRALKQHPEIIVATPGRLLD-LINQKIVKLSNLEILVLD 153
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD++L+ F L +IL +P RQ+ FSATM K++++ R + PVKIE A++ T
Sbjct: 154 EADQMLDMGFIHDLKKILKFVPTKRQSLFFSATMPKEIEQFARTIVYKPVKIEVAAEVIT 213
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
T++QQ + K K L IL E + ST+VFTRT L L+ + A+ I
Sbjct: 214 ATTIEQQVYYTEKKDKKTLLHTILKE-NTESTLVFTRTKYEANNLVKYLQKVNMVAMAIH 272
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQS R+ AL+ FK + NILI TD+A+RG+DI + VINYDIP + Y+HR+GRT
Sbjct: 273 GNKSQSARVKALDDFKNKKINILIATDIAARGIDISKLPFVINYDIPDKPETYVHRIGRT 332
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
RAG GVA+ + + I++ G K+
Sbjct: 333 GRAGVQGVAMCFCTPEQRKELKDIQRFTGIKM 364
>gi|408355702|ref|YP_006844233.1| ATP-dependent RNA helicase [Amphibacillus xylanus NBRC 15112]
gi|407726473|dbj|BAM46471.1| ATP-dependent RNA helicase [Amphibacillus xylanus NBRC 15112]
Length = 483
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/332 (42%), Positives = 205/332 (61%), Gaps = 7/332 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG AQTG+GKT AF +P+++ +I + QR + V++PTRELAIQ+SE+
Sbjct: 39 GEDVIGQAQTGTGKTAAFGIPMIE---QIEKKQRKIQGL---VVAPTRELAIQVSEEIHR 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+G +R + GG M +Q +L + PHIVVATPGRL+DH+ K ++ +K +VLD
Sbjct: 93 IGKFKGIRSLPIYGGQQMQRQIRSLKEGPHIVVATPGRLLDHMRR-KTINISDVKTIVLD 151
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD +LN F + EIL +IP RQT LFSATM K+++++ ++ P +++ SK +
Sbjct: 152 EADEMLNMGFIDDIREILKMIPHERQTLLFSATMPKEIRQIASTMMREPKEVKVKSKQLS 211
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ ++Q++ V K K L +L ++F RT L L+ G RA I
Sbjct: 212 VENIEQRFIEVHEKQKFDALTNLLDIHVPELAIIFGRTKKRVDELTDGLQARGFRAEGIH 271
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G ++Q KR+ LNKFK G IL+ TDVA+RGLDI +V V N+DIP + + Y+HR+GRT
Sbjct: 272 GDLTQGKRMSVLNKFKNGRIEILVATDVAARGLDISNVTHVYNFDIPQDPESYVHRIGRT 331
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
RAG+TGVAIS + E+ IEK+ K+
Sbjct: 332 GRAGKTGVAISFITPREMPHLKLIEKVTNAKV 363
>gi|295675961|ref|YP_003604485.1| DEAD/DEAH box helicase [Burkholderia sp. CCGE1002]
gi|295435804|gb|ADG14974.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. CCGE1002]
Length = 484
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/336 (44%), Positives = 205/336 (61%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 47 AGRDVMGAAQTGTGKTASFSLPIIQRLLPQA-NTSASPARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
+A +LR AV+ GGVDM Q+ L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVQAYAKHTALRSAVVFGGVDMNPQSDQLRRGVEILIATPGRLLDHVQQ-KTANLGQVQM 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSGEIKKLAATYLRNPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
ST + Q V K +V ++ E +VF + LA L G A
Sbjct: 225 SNSTATNVTQVVYEVAEGDKTGAVVQLIRERGLKQVIVFCNSKIGASRLARSLERDGVVA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQS+R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 TAIHGDRSQSERMQALDAFKRGEVEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG +G A+SL + E + IEKLI + L
Sbjct: 345 IGRTGRAGASGDALSLCSPNERKQLADIEKLIKRPL 380
>gi|255038837|ref|YP_003089458.1| DEAD/DEAH box helicase [Dyadobacter fermentans DSM 18053]
gi|254951593|gb|ACT96293.1| DEAD/DEAH box helicase domain protein [Dyadobacter fermentans DSM
18053]
Length = 383
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/332 (42%), Positives = 198/332 (59%), Gaps = 1/332 (0%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
KDL+G AQTG+GKT AFA+P+LQ L E + A +L+PTRELAIQI E F A
Sbjct: 39 KDLLGCAQTGTGKTAAFAIPMLQLLHENPVGKFERSRIRALILTPTRELAIQIGESFAAY 98
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
G +R V+ GGV QT AL K +++ATPGRL+D L N L L++ VLDE
Sbjct: 99 GRYTRVRHTVIFGGVGQKPQTDALAKGVDVLIATPGRLLD-LINQGFIKLNQLEFFVLDE 157
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADR+L+ F + +++ ++P RQ+ FSATM + L L+NPVK+E ST
Sbjct: 158 ADRMLDMGFVHDVKKVIKLLPGKRQSLFFSATMPPAIVTLAGTILRNPVKVEVTPVSSTA 217
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
DT++Q FV K+ L++IL + S ++ +VFTRT + +LR G + I G
Sbjct: 218 DTIRQSVFFVDKSNKNSLLLHILQDESIATALVFTRTKHGADKVVKVLRKAGVTSEAIHG 277
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+ SQ+ R AL FK +L+ TD+A+RG+D+ + VINY+IP + Y+HR+GRT
Sbjct: 278 NKSQTARQNALKNFKNQTTRVLVATDIAARGIDVDDLTHVINYEIPNIPETYVHRIGRTG 337
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
RAG G+A+S ++ E + I KLI K +P
Sbjct: 338 RAGAKGIALSFCDKEEKPYLKDIHKLIAKNIP 369
>gi|189188460|ref|XP_001930569.1| ATP-dependent RNA helicase DBP8 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972175|gb|EDU39674.1| ATP-dependent RNA helicase DBP8 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 514
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 163/391 (41%), Positives = 229/391 (58%), Gaps = 44/391 (11%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD IG ++TG+GKT AF++PILQ E FA +++PTRELAIQI EQ +A
Sbjct: 121 GKDCIGGSRTGTGKTVAFSVPILQKWSEDPSG------IFAVIVTPTRELAIQIYEQVKA 174
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKY 124
+ + S++ ++ GG D Q +AL RPH+V+ATPGRL +H+ T G L +K+
Sbjct: 175 ISAPQSMKPILITGGSDQRSQAIALASRPHVVIATPGRLAEHI-RTSGEDTICGLRRVKF 233
Query: 125 LVLDEADRLL---NDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKN 176
+V DEADRLL L+ L+V+P RQT LF+AT+T +V L+ RA +
Sbjct: 234 VVFDEADRLLAPGKGSMLPDLETCLSVLPPKESRQTLLFTATVTPEVMALKHQPRAPGRL 293
Query: 177 PVKIEAASKYSTVDT--------LKQQYRFVPAKYKDCYLVYIL-TEV-SASSTMVFTRT 226
P+ + S VDT L+Q+Y P +K+CYL +L T V S S ++F
Sbjct: 294 PIFV------SEVDTEDLAIPPRLQQKYLQTPVTHKECYLHVLLNTPVNSTKSVIIFCNR 347
Query: 227 CDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSV 286
LL MLR L R + + QS R+ L +F+A IL+ TDVA+RGLDIP V
Sbjct: 348 TKTATLLEYMLRLLDHRVTALHSGLKQSDRVSNLARFRAQAARILVATDVAARGLDIPEV 407
Query: 287 DMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAE 346
+VIN+D+P + DYIHRVGRTARAGR G +I+ + Q +++ L IE +GKK+ EF E
Sbjct: 408 ALVINFDVPRDPDDYIHRVGRTARAGRVGTSITFIGQRDVDLVLAIETRVGKKMDEF--E 465
Query: 347 EEEVLL-------LLERVTEAKRISQMTIKD 370
EE V + L+ VTE KR + ++I++
Sbjct: 466 EEGVSVEGRVLRDALKPVTEKKREAMLSIEE 496
>gi|395003518|ref|ZP_10387653.1| DNA/RNA helicase, superfamily II [Acidovorax sp. CF316]
gi|394318531|gb|EJE54950.1| DNA/RNA helicase, superfamily II [Acidovorax sp. CF316]
Length = 499
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/335 (42%), Positives = 204/335 (60%), Gaps = 5/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF+LP+LQ LL+ E+ T PA A VL PTRELA Q+++Q
Sbjct: 40 GQDVMGAAQTGTGKTAAFSLPLLQRLLK-HESSSTSPARHPVRALVLLPTRELADQVAQQ 98
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
LR V+ GG+DM QT+ L K ++VATPGRL+DH+ K L ++Y+
Sbjct: 99 IALYAKYTKLRSTVVFGGMDMKPQTIELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYV 157
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L+NP+ IE A
Sbjct: 158 VLDEADRMLDIGFLPDLQRILSYLPKQRTTLLFSATFSPEIKRLAGSYLQNPITIEVARP 217
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
T T++Q++ K + +L +F + LA L G +
Sbjct: 218 NETASTVEQRFYSANDDDKRRAIHQVLKTRGLKQAFIFVNSKLGCARLARSLEREGLKTA 277
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL FK GE ++L+CTDVA+RGLDI V V N+D+P N++DY+HR+
Sbjct: 278 ALHGDKSQDERLKALEAFKKGEVDLLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRI 337
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
GRT RAG +G+A++LV+ + IEKLI KK+
Sbjct: 338 GRTGRAGASGLAVTLVSGSDARLVADIEKLIKKKI 372
>gi|451998004|gb|EMD90469.1| hypothetical protein COCHEDRAFT_1179307 [Cochliobolus heterostrophus
C5]
Length = 1062
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 164/391 (41%), Positives = 229/391 (58%), Gaps = 44/391 (11%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD IG ++TG+GKT AF++PILQ E FA +++PTRELAIQI EQ +A
Sbjct: 669 GKDCIGGSRTGTGKTIAFSVPILQKWAEDPS------GIFAVIITPTRELAIQIYEQVKA 722
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKY 124
+ + S++ ++ GG D Q + L RPH+V+ATPGRL +H+ T G L +++
Sbjct: 723 ISAPQSMKPILITGGSDQRAQAIELASRPHVVIATPGRLAEHI-RTSGEDTICGLRRVRF 781
Query: 125 LVLDEADRLL---NDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKN 176
+V DEADRLL L+ L+V+P RQT LF+AT+T +V L+ RA +
Sbjct: 782 VVFDEADRLLAPGKGSMLPDLETCLSVLPPKETRQTLLFTATVTPEVLALKDQPRAPGRL 841
Query: 177 PVKIEAASKYSTVDT--------LKQQYRFVPAKYKDCYLVYIL-TEV-SASSTMVFTRT 226
P+ + S VDT L+Q+Y P +K+CYL +L T V S S ++F
Sbjct: 842 PIFV------SEVDTEELAIPPRLQQRYLQTPVTHKECYLYVLLNTPVNSEKSVIIFCNR 895
Query: 227 CDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSV 286
LL MLR L R + + QS R+ L +F+A IL+ TDVA+RGLDIP V
Sbjct: 896 TKTATLLEYMLRLLDHRVTALHSGLKQSDRVNNLARFRAQAARILVATDVAARGLDIPEV 955
Query: 287 DMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAE 346
+VIN+D+P + DYIHRVGRTARAGR G AI+L+ Q ++E L IE +GKK+ EF E
Sbjct: 956 ALVINFDVPRDPDDYIHRVGRTARAGRVGTAITLIGQRDVELVLAIEARVGKKMEEF--E 1013
Query: 347 EEEVLL-------LLERVTEAKRISQMTIKD 370
EE V + L+ VTE KR + ++I++
Sbjct: 1014 EEGVSVEGRVVRDALKPVTEKKREAMLSIEE 1044
>gi|344171941|emb|CCA84567.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia syzygii R24]
Length = 481
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/341 (43%), Positives = 208/341 (60%), Gaps = 9/341 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT F+LPI+Q LL A N PA A +L+PTRELA Q+ +
Sbjct: 37 AGRDVMGAAQTGTGKTAGFSLPIIQNLLPEA-NTSASPARHPVRALILTPTRELADQVYD 95
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
G +LR AV+ GGVDM QT L + I+VATPGRL+DH+ + +L ++
Sbjct: 96 NVAKYGKYTALRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHVQQ-RSVNLSQVRM 154
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L I+N++P RQT LFSAT + ++KKL + L++P IE A
Sbjct: 155 LVLDEADRMLDMGFLPDLQRIINLLPAHRQTLLFSATFSPEIKKLAASYLRHPQTIEVAR 214
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVS----ASSTMVFTRTCDATRLLALMLRNL 240
+T D ++Q VP +K LV++L + + S +VF+ + LA L
Sbjct: 215 SNATADNVRQVIYTVPDGHKQAALVHLLRQRAEQGLPSQCIVFSNSKIGCSRLARALERE 274
Query: 241 GQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKD 300
G A I G +Q++R+ L FK G ++L+ TDVA+RGLDI + VIN+D+P N++D
Sbjct: 275 GINANAIHGDKTQTERMQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAED 334
Query: 301 YIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
Y+HR+GRT RAG +G A+SL + IEKLI + LP
Sbjct: 335 YVHRIGRTGRAGASGDALSLFAPGDERLLADIEKLIKRNLP 375
>gi|288925923|ref|ZP_06419853.1| ATP-dependent RNA helicase RhlE [Prevotella buccae D17]
gi|288337347|gb|EFC75703.1| ATP-dependent RNA helicase RhlE [Prevotella buccae D17]
Length = 375
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/333 (42%), Positives = 206/333 (61%), Gaps = 2/333 (0%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DL+G+AQTG+GKT AFA+PI+Q L + A++ R A +L+PTRELAIQI E F+
Sbjct: 38 GRDLLGIAQTGTGKTAAFAIPIIQQLAKSADDNRRR-DIKALILTPTRELAIQIEECFKD 96
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LRC V+ GGV Q L + I++ATPGRL+D L + +L + + VLD
Sbjct: 97 YSKFTRLRCCVIFGGVSQNGQVKELERGVDILIATPGRLLD-LISQHIITLEHICHFVLD 155
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F + +++ ++P+ RQT LFSATM + + KL ++ L P ++E A S
Sbjct: 156 EADRMLDMGFIHDIKKLIPLLPKRRQTLLFSATMPETIAKLSKSLLYKPARVEVAPVSSV 215
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDT++Q+ FV K LV +L S +VF+RT +A L+ I
Sbjct: 216 VDTIEQRLYFVEKPQKTDLLVSVLKNDGNRSALVFSRTKHGADRIARKLKARHIECEAIH 275
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ+ R AL FK+G+ +++ TD+A+RG+DI ++ MVINYD+P ++ Y+HR+GRT
Sbjct: 276 GNKSQNARQRALTNFKSGKTRVIVATDIAARGIDIANLQMVINYDLPDVAETYVHRIGRT 335
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
RAG +GVA++ Q E I+KL GKKLP
Sbjct: 336 GRAGNSGVALTFCTQDERPMVRDIQKLTGKKLP 368
>gi|153809380|ref|ZP_01962048.1| hypothetical protein BACCAC_03694 [Bacteroides caccae ATCC 43185]
gi|423221053|ref|ZP_17207547.1| hypothetical protein HMPREF1061_04320 [Bacteroides caccae
CL03T12C61]
gi|149127966|gb|EDM19188.1| DEAD/DEAH box helicase [Bacteroides caccae ATCC 43185]
gi|392622292|gb|EIY16424.1| hypothetical protein HMPREF1061_04320 [Bacteroides caccae
CL03T12C61]
Length = 375
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/333 (42%), Positives = 201/333 (60%), Gaps = 1/333 (0%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
A +D++G AQTG+GKT +FA+PI+Q L +++ A +L+PTRELA+QISE +
Sbjct: 37 AKRDILGCAQTGTGKTASFAIPIIQHLQVVSKESVKRQGIKALILTPTRELALQISECID 96
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
+R V+ GGV+ Q L K I+VATPGRL+D L N L T++Y VL
Sbjct: 97 DYSKYTRVRHGVIFGGVNQRPQVDMLRKGIDILVATPGRLLD-LMNQGHIHLDTIQYFVL 155
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L+ F + IL +P+ +QT FSATM + L ++ LKNPVKI K S
Sbjct: 156 DEADRMLDMGFIHDIKRILPKLPKEKQTLFFSATMPDTIVTLTKSLLKNPVKIYITPKSS 215
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVD++ Q FV K K L+ IL + S ++F+RT + +L G + I
Sbjct: 216 TVDSINQVVYFVEKKEKSQLLISILQKAEDQSVLIFSRTKHNADKIVKILGKAGIGSQAI 275
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G+ SQ+ R AL FK+G+ +++ TD+ASRG+DI + MVINYD+P + Y+HR+GR
Sbjct: 276 HGNKSQAARQSALGNFKSGKTRVMVATDIASRGIDISELPMVINYDLPDVPETYVHRIGR 335
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
T RAG TG A++ +Q E + I+KL GKKL
Sbjct: 336 TGRAGNTGTALTFCSQEERKLVNDIQKLTGKKL 368
>gi|310791457|gb|EFQ26984.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 772
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/319 (43%), Positives = 196/319 (61%), Gaps = 7/319 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKTGAF +PIL+ LL + VP +L+PTRELAIQ
Sbjct: 284 GKDVVGGAVTGSGKTGAFVVPILERLLY---RPKKVPTSRVVILTPTRELAIQCHAVATK 340
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + ++ + VGG+ + Q + L RP +++ATPGR +DH+ N+ F++ T++ LVLD
Sbjct: 341 LAAYTDIKFTLAVGGLSLKAQEVELRLRPDVIIATPGRFIDHMRNSASFNVDTVEILVLD 400
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADR+L D F L+EIL +P+ RQT LFSATMT V KL R + P ++ S K
Sbjct: 401 EADRMLEDGFADELNEILTTLPKSRQTMLFSATMTSSVDKLVRLGMNKPARVMVDSQKNK 460
Query: 188 TVDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
TV TL Q++ R P + + YLV+I + +VF R ++ LG
Sbjct: 461 TVGTLVQEFVRLRPGREEKRMGYLVHICKTMHTERVIVFFRQKKEAHRARIIFGLLGMSC 520
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
+ G M+Q++R+ ++ F+ G+ N L+ TD+ASRGLDI VD VINY+ P N + Y+HR
Sbjct: 521 AELHGSMNQAQRIASVENFRDGKVNYLLATDLASRGLDIKGVDTVINYEAPQNIEIYVHR 580
Query: 305 VGRTARAGRTGVAISLVNQ 323
VGRTARAGRTG+AI+L +
Sbjct: 581 VGRTARAGRTGIAITLAAE 599
>gi|325568403|ref|ZP_08144770.1| cold-shock DEAD box protein A [Enterococcus casseliflavus ATCC
12755]
gi|420263005|ref|ZP_14765645.1| cold-shock DEAD box protein A [Enterococcus sp. C1]
gi|325158172|gb|EGC70325.1| cold-shock DEAD box protein A [Enterococcus casseliflavus ATCC
12755]
gi|394769969|gb|EJF49787.1| cold-shock DEAD box protein A [Enterococcus sp. C1]
Length = 508
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/349 (41%), Positives = 207/349 (59%), Gaps = 16/349 (4%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKD+IG AQTG+GKT AF LP+L+ + + A +Q V++PTRELAIQ E+
Sbjct: 37 AGKDVIGQAQTGTGKTAAFGLPMLEKI-DPANHQ-----LQGLVIAPTRELAIQTQEELY 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
LG +R + GG D+ +Q L RPHIVV TPGR++DH+ N LGT++ LVL
Sbjct: 91 RLGKDKKIRVQAVYGGADIGRQIRQLKDRPHIVVGTPGRMLDHI-NRHTLKLGTVETLVL 149
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEAD +LN F + +++I++ +P +RQT LFSATM +K + +K P ++ +K
Sbjct: 150 DEADEMLNMGFLEDIEKIISQVPDVRQTLLFSATMPPAIKNIGVKFMKEPEHVQIKAKEM 209
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEV----SASSTMVFTRTCDATRLLALMLRNLGQR 243
T D + Q Y + KD ++T + S T+VF RT LA L G +
Sbjct: 210 TADLIDQYY----VRSKDYEKFDVMTRLLDVQSPELTIVFGRTKRRVDELARGLEARGYK 265
Query: 244 AIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIH 303
A I G +SQ KR+ L FK+G+ +IL+ TDVA+RGLDI V V NYDIP + + Y+H
Sbjct: 266 AEGIHGDLSQQKRMSVLRSFKSGQLDILVATDVAARGLDISGVTHVYNYDIPQDPESYVH 325
Query: 304 RVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL-PEFPAEEEEVL 351
R+GRT RAG+ G++++ V E+ + IE L K++ P P E+E
Sbjct: 326 RIGRTGRAGKGGMSVTFVTPNEMSYLHVIENLTKKRMTPMRPPTEKEAF 374
>gi|332525460|ref|ZP_08401618.1| putative ATP-dependent RNA helicase 2 [Rubrivivax benzoatilyticus
JA2]
gi|332108727|gb|EGJ09951.1| putative ATP-dependent RNA helicase 2 [Rubrivivax benzoatilyticus
JA2]
Length = 483
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/344 (41%), Positives = 209/344 (60%), Gaps = 5/344 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF +P+LQ +L EN PA A VL+PTRELA Q++
Sbjct: 54 GRDVMGAAQTGTGKTAAFTIPLLQKMLR-HENTSMSPARHPVRALVLAPTRELADQVAAN 112
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+ LR AV+ GGVDM QT L +++ATPGRL+DH+ + L ++Y+
Sbjct: 113 VKTYAKHTRLRSAVVFGGVDMKPQTAELKAGVEVLIATPGRLLDHI-EARNAVLNQVEYV 171
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ RQT LFSAT + ++K+L + L++PV +E A
Sbjct: 172 VLDEADRMLDIGFLPDLQRILSFLPKTRQTLLFSATFSPEIKRLAGSYLQDPVTVEVARP 231
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T T++Q++ V K + IL + S +VF + LA G +
Sbjct: 232 NATASTVEQRFYGVGDDDKRATVRQILRQRELSQAIVFVNSKLGAARLARSFERDGLKTQ 291
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL FKAGE ++L+ TDVA+RGLDI + V N+D+P N++DY+HR+
Sbjct: 292 ALHGDKSQDERLKALAAFKAGEVDLLVATDVAARGLDIADLPAVFNFDVPFNAEDYVHRI 351
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEE 349
GRT RAG +G+A++LV + + IEKLI KK+ P E E+
Sbjct: 352 GRTGRAGASGLAVTLVTRDDTRLIGDIEKLIKKKIEIEPFEIED 395
>gi|300690871|ref|YP_003751866.1| DEAD/DEAH box helicase [Ralstonia solanacearum PSI07]
gi|299077931|emb|CBJ50571.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia solanacearum
PSI07]
gi|344167288|emb|CCA79493.1| ATP-dependent RNA helicase, deaD-box family [blood disease
bacterium R229]
Length = 495
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/341 (43%), Positives = 208/341 (60%), Gaps = 9/341 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT F+LPI+Q LL A N PA A +L+PTRELA Q+ +
Sbjct: 51 AGRDVMGAAQTGTGKTAGFSLPIIQNLLPEA-NTSASPARHPVRALILTPTRELADQVYD 109
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
G +LR AV+ GGVDM QT L + I+VATPGRL+DH+ + +L ++
Sbjct: 110 NVAKYGKYTALRSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHVQQ-RSVNLSQVRM 168
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L I+N++P RQT LFSAT + ++KKL + L++P IE A
Sbjct: 169 LVLDEADRMLDMGFLPDLQRIINLLPAHRQTLLFSATFSPEIKKLAASYLRHPQTIEVAR 228
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVS----ASSTMVFTRTCDATRLLALMLRNL 240
+T D ++Q VP +K LV++L + + S +VF+ + LA L
Sbjct: 229 SNATADNVRQVIYTVPDGHKQAALVHLLRQRAEQGLPSQCIVFSNSKIGCSRLARALERE 288
Query: 241 GQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKD 300
G A I G +Q++R+ L FK G ++L+ TDVA+RGLDI + VIN+D+P N++D
Sbjct: 289 GINANAIHGDKTQTERMQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAED 348
Query: 301 YIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
Y+HR+GRT RAG +G A+SL + IEKLI + LP
Sbjct: 349 YVHRIGRTGRAGASGDALSLFAPGDERLLADIEKLIKRNLP 389
>gi|307729080|ref|YP_003906304.1| DEAD/DEAH box helicase [Burkholderia sp. CCGE1003]
gi|307583615|gb|ADN57013.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. CCGE1003]
Length = 487
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 206/336 (61%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT +F+LPI+Q LL A + PA A +L+PTRELA Q++
Sbjct: 47 AGRDVMGAAQTGTGKTASFSLPIIQRLLPQASTSAS-PARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
+A +LR AV+ GGVDM Q+ L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVQAYAKHTALRSAVVFGGVDMNPQSEQLRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSGEIKKLAATYLRNPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
ST + Q V K +V ++ E S +VF + LA L G A
Sbjct: 225 SNSTATNVTQIVYEVAEGDKTGAVVQLIRERSLKQVIVFCNSKIGASRLARSLERDGVVA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQ++R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 TAIHGDRSQNERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG +G A+SL + E + IEKLI + L
Sbjct: 345 IGRTGRAGASGDALSLCSPNERKQLADIEKLIKRPL 380
>gi|420246760|ref|ZP_14750191.1| DNA/RNA helicase, superfamily II, partial [Burkholderia sp. BT03]
gi|398073382|gb|EJL64557.1| DNA/RNA helicase, superfamily II, partial [Burkholderia sp. BT03]
Length = 411
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 204/335 (60%), Gaps = 5/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT F+LPI+Q LL +A + PA A +L+PTRELA Q++
Sbjct: 48 GRDVMGAAQTGTGKTAGFSLPIIQRLLPLASTSAS-PARHPVRALILTPTRELADQVAAN 106
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+A SLR AV+ GGVDM Q+ L + I++ATPGRL+DH+ K +LG ++ L
Sbjct: 107 VQAYAKHTSLRSAVVFGGVDMNPQSAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQIL 165
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L ILN++P RQT LFSAT + ++KKL L+NP IE A
Sbjct: 166 VLDEADRMLDMGFLPDLQRILNLLPAERQTLLFSATFSPEIKKLASTYLRNPQTIEVARS 225
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
ST + Q V K +V ++ + +VF + LA L G A
Sbjct: 226 NSTATNVTQIVYEVAEGDKTGAVVKLIRDRGLKQVIVFCNSKIGASRLARQLERDGVVAT 285
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G +QS+R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR+
Sbjct: 286 AIHGDRTQSERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRI 345
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
GRT RAG +G A+SL + +E + IEKLI + L
Sbjct: 346 GRTGRAGASGDALSLFSPHERKQLADIEKLIKRPL 380
>gi|330926544|ref|XP_003301506.1| hypothetical protein PTT_13026 [Pyrenophora teres f. teres 0-1]
gi|311323638|gb|EFQ90408.1| hypothetical protein PTT_13026 [Pyrenophora teres f. teres 0-1]
Length = 514
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 161/391 (41%), Positives = 231/391 (59%), Gaps = 44/391 (11%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD IG ++TG+GKT AF++PILQ E FA +++PTRELAIQI EQ +A
Sbjct: 121 GKDCIGGSRTGTGKTVAFSVPILQKWSEDPSG------IFAVIVTPTRELAIQIYEQVKA 174
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKY 124
+ + S++ ++ GG D Q +AL RPH+V+ATPGRL +H+ T G L +K+
Sbjct: 175 ISAPQSMKPILITGGSDQRSQAIALASRPHVVIATPGRLAEHI-RTSGEDTICGLRRVKF 233
Query: 125 LVLDEADRLL---NDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKN 176
+V DEADRLL L+ L+V+P RQT LF+AT+T +V L+ RA +
Sbjct: 234 VVFDEADRLLAPGKGSMLPDLETCLSVLPPKESRQTLLFTATVTPEVMALKHQPRAPGRL 293
Query: 177 PVKIEAASKYSTVDT--------LKQQYRFVPAKYKDCYLVYIL-TEVSAS-STMVFTRT 226
P+ + S VDT L+Q+Y P +K+CYL +L T V+++ S ++F
Sbjct: 294 PIFV------SEVDTEDLAIPPRLQQKYLQTPVTHKECYLHVLLNTPVNSNKSVIIFCNR 347
Query: 227 CDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSV 286
LL MLR L R + + Q+ R+ L +F+A IL+ TDVA+RGLDIP V
Sbjct: 348 TKTATLLEYMLRLLDHRVTALHSGLKQTDRVSNLARFRAQAARILVATDVAARGLDIPEV 407
Query: 287 DMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAE 346
+VIN+D+P + DYIHRVGRTARAGR G +I+ + Q +++ L IE +GKK+ EF E
Sbjct: 408 ALVINFDVPRDPDDYIHRVGRTARAGRVGTSITFIGQRDVDLILAIETRVGKKMDEF--E 465
Query: 347 EEEVLL-------LLERVTEAKRISQMTIKD 370
EE V + L+ VTE KR + ++I++
Sbjct: 466 EEAVSVEGRVLRDALKPVTEKKREAMLSIEE 496
>gi|256070762|ref|XP_002571711.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|350646384|emb|CCD58943.1| DEAD box ATP-dependent RNA helicase, putative [Schistosoma mansoni]
Length = 453
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 161/425 (37%), Positives = 236/425 (55%), Gaps = 48/425 (11%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D++ A+TGSGKT AF +PILQ+L+ + +A +++PTRELA QI EQ
Sbjct: 38 GNDVVACAKTGSGKTAAFLIPILQSLMT------ELKPLYALIITPTRELAHQIGEQAAG 91
Query: 69 LG--SGISLRCAVLV--GGVDMMQQTLALGKRPHIVVATPGRLMDHL-----------TN 113
L G L C VLV GG ++ Q++ L + PHIVV+TPGRL D L N
Sbjct: 92 LNLIQGEPL-CNVLVITGGRSIVHQSIDLARSPHIVVSTPGRLADLLRTQTAAQEADTEN 150
Query: 114 TKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRAC 173
++L K +VLDEADRLL D+F + L+ IL +P+ RQT LFSAT + VK A
Sbjct: 151 KPEWTLSRTKVVVLDEADRLLEDNFGEDLNTILKALPKRRQTLLFSATFSGAVKSSLEAA 210
Query: 174 -------------LKNPVKIEAASKYS--TVDTLKQQYRFVPAKYKDCYLVY----ILTE 214
L P + S TV+TL Q Y + ++K+ +LV+ LTE
Sbjct: 211 KSVAYAENRRPPILWQPECMTTCSSAGAVTVETLSQYYILMRPEHKEAFLVHTVDQFLTE 270
Query: 215 VSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICT 274
S M+FT C L+ LM+ +LG + + M+Q R+ +L F++ + +LI T
Sbjct: 271 NPHSLIMIFTNKCKWCHLIGLMMTSLGIKTTLLHSSMTQKNRISSLTLFRSSQIRVLIAT 330
Query: 275 DVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEK 334
D+ASRGLD P+VD+VIN+++P KDY+HRVGRTARAG+ G+A++L + +E++ I+
Sbjct: 331 DLASRGLDFPTVDIVINHNVPIRPKDYVHRVGRTARAGKAGLALTLCDLFEVKRLKAIQT 390
Query: 335 LIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINK 394
I K+L F E++V ++ V+ A+R D+ K DE +I + + K
Sbjct: 391 FINKELKTFDVNEKKVAQIIAEVSIARR-------DAERKLDEIRFDEKREINKAKNLMK 443
Query: 395 KKLSK 399
+ SK
Sbjct: 444 ARSSK 448
>gi|170579441|ref|XP_001894832.1| Helicase conserved C-terminal domain containing protein [Brugia
malayi]
gi|158598430|gb|EDP36322.1| Helicase conserved C-terminal domain containing protein [Brugia
malayi]
Length = 378
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 215/358 (60%), Gaps = 18/358 (5%)
Query: 60 IQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHL---TNTKG 116
+QI +QF ALG I L+ ++VGG D + Q+ L +RPHIVVATPGRL DHL + G
Sbjct: 1 MQIGDQFAALGVSIGLKIGIIVGGKDRVAQSSDLARRPHIVVATPGRLADHLESDSENTG 60
Query: 117 FSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKN 176
L++LVLDEADRLL+ + L IL +P+ RQT LFSAT+T + +L + +K
Sbjct: 61 KLFEKLRFLVLDEADRLLDGQYSIELKTILTFLPKQRQTLLFSATITSALSQLHQVSVKK 120
Query: 177 PVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSA----SSTMVFTRTCDATRL 232
P E S+ +TVD L+Q+Y P KD YLVY++ S ++F+ TC +
Sbjct: 121 PYFFEDKSEIATVDKLEQKYVLCPCAVKDAYLVYVVKNFHEKHPESLILIFSHTCRECQA 180
Query: 233 LALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINY 292
LA+M LG + + +SQ +R +L KF++G ILICTDVASRGLDIP VD+V+N+
Sbjct: 181 LAIMFHGLGFKVGSLHSQISQQERTSSLTKFRSGRIKILICTDVASRGLDIPHVDLVVNH 240
Query: 293 DIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL 352
++P N K YIHRVGR+ARAGR G A+ V QY++ +IEK+I KKL + +++V
Sbjct: 241 NVPQNPKTYIHRVGRSARAGRFGCALLFVTQYDIYLLQEIEKIIKKKLDKLVVNDKKVTQ 300
Query: 353 LLERVTEAKRISQMTIKDSG-------NKRRRK--GGDEDDDIGRQFGINKKKLSKRK 401
+ +V KR +++ + NKR+ G + D++ R + +++ KRK
Sbjct: 301 YVTQVLVTKREAEIKLDQQNFGERKIINKRKEMLIAGLDPDEVERTLKMQREQ--KRK 356
>gi|332662156|ref|YP_004444944.1| DEAD/DEAH box helicase [Haliscomenobacter hydrossis DSM 1100]
gi|332330970|gb|AEE48071.1| DEAD/DEAH box helicase domain protein [Haliscomenobacter hydrossis
DSM 1100]
Length = 380
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 202/339 (59%), Gaps = 1/339 (0%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
KDL+G AQTG+GKT AFA+PILQ L + + A +L+PTRELAIQISE F A
Sbjct: 39 KDLLGCAQTGTGKTAAFAIPILQLLYQDKGLSKGPRQLKALILTPTRELAIQISESFGAY 98
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
G L+ AV+ GGV+ +Q A+ I+VATPGRL+D L N + SL + VLDE
Sbjct: 99 GRNCGLKHAVIFGGVNQSKQVEAIRGGLDILVATPGRLLD-LMNQQLLSLQHINTFVLDE 157
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADR+L+ F + I+ +P+ RQ+ FSATM +++KL L NPVK+E + ST
Sbjct: 158 ADRMLDMGFVHDVKRIITRLPQRRQSLFFSATMPPEIQKLANTILSNPVKVEVSPISSTT 217
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
+ ++Q FV + K L+ +L + S +VFTRT + + G R+ I G
Sbjct: 218 EMVEQMVYFVEKRDKRNLLIQLLRSPNVKSALVFTRTKHGADKINRDIVKAGIRSNAIHG 277
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+ SQ+ R ALN FK G+ +L+ TD+A+RG+D+ ++ VINYD+P + Y+HR+GRT
Sbjct: 278 NKSQNARQSALNGFKEGKLRVLVATDIAARGIDVDNLSHVINYDLPNIPETYVHRIGRTG 337
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEE 348
RAG +G+A+S + E + I KLI K +P E
Sbjct: 338 RAGASGIALSFCDSEERAYLRDISKLIAKNIPSVNYHPE 376
>gi|259488879|tpe|CBF88686.1| TPA: ATP-dependent RNA helicase (Drs1), putative (AFU_orthologue;
AFUA_1G14990) [Aspergillus nidulans FGSC A4]
Length = 814
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 139/318 (43%), Positives = 193/318 (60%), Gaps = 6/318 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKT AF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 335 GKDIVGSAVTGSGKTAAFVVPILERLLF---RPRKVPTSRVAILMPTRELAVQCYNVATK 391
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + LVGG + +Q L KRP +++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 392 LATYTDITFCQLVGGFSLREQENVLKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLD 451
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EIL IP+ RQT LFSATMT V KL R L PV++ +K +T
Sbjct: 452 EADRMLEDGFADELNEILTTIPKSRQTMLFSATMTDSVDKLIRVGLNRPVRLMVDTKKNT 511
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
TL Q++ R P + YL+++ EV +VF R + ++ LG +A
Sbjct: 512 AVTLVQEFVRLRPGREDKRLGYLLHLCKEVYTGRVIVFFRQKKEAHRVRIVFGLLGLKAA 571
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ ++ F+ G N L+ TD+ASRGLDI V+ VINY+ P + + Y+HRV
Sbjct: 572 ELHGSMSQEQRIKSVESFRDGNVNFLLATDLASRGLDIKGVETVINYEAPQSHEIYVHRV 631
Query: 306 GRTARAGRTGVAISLVNQ 323
GRTARAGR+G A ++ +
Sbjct: 632 GRTARAGRSGRACTIAAE 649
>gi|409407327|ref|ZP_11255778.1| ATP-dependent RNA helicase [Herbaspirillum sp. GW103]
gi|386433078|gb|EIJ45904.1| ATP-dependent RNA helicase [Herbaspirillum sp. GW103]
Length = 487
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 145/335 (43%), Positives = 201/335 (60%), Gaps = 5/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT F+LPI+Q LL A + + PA A +L+PTRELA Q++E
Sbjct: 53 GRDVMGAAQTGTGKTAGFSLPIIQRLLAHASHSAS-PARHPVRALILTPTRELADQVAEN 111
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+A LR V+ GGVDM QT L IV+ATPGRL+DH+ K +L + L
Sbjct: 112 VKAYSRFTPLRSTVVFGGVDMAPQTATLRAGVEIVIATPGRLLDHVQQ-KTVNLSQTQIL 170
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
V+DEADR+L+ F L I+N++P+ RQ LFSAT + ++KKL + NPV IE A
Sbjct: 171 VMDEADRMLDMGFLPDLQRIINLLPKQRQNLLFSATFSPEIKKLAASFQNNPVTIEVARS 230
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T + + Q V K + +I+ + +VF+ T LA L G +A
Sbjct: 231 NATAENVSQTIYKVEEAAKADAVSFIIRQRELKQVIVFSNTKIGASRLARTLVAEGVKAS 290
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G +QS+R+ AL FK G+ +L+ TDVA+RGLDI + VINYD+P N++DY+HR+
Sbjct: 291 AIHGDKTQSERMAALESFKQGQIEVLVATDVAARGLDIAELPCVINYDLPYNAEDYVHRI 350
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
GRT RAG +G AISL + + IEKLI KK
Sbjct: 351 GRTGRAGASGDAISLFCDKDERLLVDIEKLIKKKF 385
>gi|209517599|ref|ZP_03266438.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. H160]
gi|209502012|gb|EEA02029.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. H160]
Length = 510
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 205/336 (61%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT +F+LPI+Q LL A + PA A +L+PTRELA Q++
Sbjct: 69 AGRDVMGAAQTGTGKTASFSLPIIQRLLPQASTSAS-PARHPVRALILTPTRELADQVAA 127
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
+A +LR AV+ GGVDM Q+ L + I++ATPGRL+DH+ K +LG ++
Sbjct: 128 NVQAYAKHTALRSAVVFGGVDMNPQSEQLRRGVEILIATPGRLLDHVQQ-KTANLGQVQM 186
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 187 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSGEIKKLAATYLRNPQTIEVAR 246
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
ST + Q V K +V ++ E +VF + LA L G A
Sbjct: 247 SNSTATNVTQVVYEVAEGDKTGAVVKLIRERGLKQVIVFCNSKIGASRLARSLERDGVVA 306
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQS+R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 307 TAIHGDRSQSERMQALDAFKRGEVEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 366
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG +G A+SL + E + IEKLI + L
Sbjct: 367 IGRTGRAGASGDALSLCSPNERKQLADIEKLIKRPL 402
>gi|336469774|gb|EGO57936.1| hypothetical protein NEUTE1DRAFT_81992 [Neurospora tetrasperma FGSC
2508]
Length = 830
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 137/318 (43%), Positives = 195/318 (61%), Gaps = 6/318 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKT AF +PIL+ LL + VP +L+PTRELAIQ
Sbjct: 331 GKDVVGGAVTGSGKTAAFVVPILERLLY---RPKKVPTTRVVILTPTRELAIQCHAVAVK 387
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L S ++ + VGG+ + Q L RP +V+ATPGR +DH+ N+ F++ T++ LVLD
Sbjct: 388 LASHTDIKFCLAVGGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVDTIEILVLD 447
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EIL +P+ RQT LFSATMT V +L RA L PV+I A S+ T
Sbjct: 448 EADRMLEDGFADELNEILTTLPKSRQTMLFSATMTSSVDRLIRAGLNKPVRIMADSQKKT 507
Query: 189 VDTLKQQY-RFVPAKY--KDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
TL Q++ R P + ++ YL++I + ++F R + ++ G
Sbjct: 508 AGTLVQEFVRLRPGRESKREGYLLHICKTIYTERVIIFFRQKKIAHKMRIIFGLFGLSCA 567
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G M+Q++R+ ++ F+ G+ N L+ TD+ASRGLDI VD VINY+ P + Y+HRV
Sbjct: 568 ELHGSMNQAQRIQSVEDFRDGKVNFLLATDLASRGLDIKGVDTVINYEAPQTPEIYVHRV 627
Query: 306 GRTARAGRTGVAISLVNQ 323
GRTARAGR+G AI+L +
Sbjct: 628 GRTARAGRSGTAITLAAE 645
>gi|217976993|ref|YP_002361140.1| DEAD/DEAH box helicase [Methylocella silvestris BL2]
gi|217502369|gb|ACK49778.1| DEAD/DEAH box helicase domain protein [Methylocella silvestris BL2]
Length = 448
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 145/335 (43%), Positives = 203/335 (60%), Gaps = 6/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFA--CVLSPTRELAIQISEQF 66
G+DL+G+AQTG+GKT AFALPIL ++A N + P A VLSPTRELA QI+E F
Sbjct: 39 GRDLVGIAQTGTGKTAAFALPILH---QLAANPQQPPRGGARVLVLSPTRELASQIAESF 95
Query: 67 EALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLV 126
+LGS + L AV+ GGV Q AL + ++VATPGRL+DHL ++ LG ++ V
Sbjct: 96 RSLGSEMQLSVAVVFGGVPHGAQIRALQRGLDVLVATPGRLVDHL-DSGVAHLGKTEFFV 154
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
LDE D++L+ F K++ I+ +P+ RQ FSATM ++ KL LKNP ++
Sbjct: 155 LDEVDQMLDLGFVKAIHRIVKTLPQRRQNLFFSATMPTEIAKLAADLLKNPAQVSVTPVA 214
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
T D ++QQ FV K LV +L + + T++FTRT +A L G A
Sbjct: 215 KTADRVEQQVLFVETHRKRDILVDLLADAKMARTIIFTRTKRGADKVAQHLEVCGVSAAA 274
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
I G+ SQS+R +L F+AG L+ TD+A+RG+D+ V V+N+D+P + Y+HR+G
Sbjct: 275 IHGNKSQSQRERSLASFRAGRVRALVATDIAARGIDVDGVTHVVNFDLPEVPEAYVHRIG 334
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
RTARAG GVAISL + E + IE+L +LP
Sbjct: 335 RTARAGAEGVAISLCDGAERDLLRNIERLTRLRLP 369
>gi|257870943|ref|ZP_05650596.1| helicase [Enterococcus gallinarum EG2]
gi|357051322|ref|ZP_09112516.1| hypothetical protein HMPREF9478_02499 [Enterococcus saccharolyticus
30_1]
gi|257805107|gb|EEV33929.1| helicase [Enterococcus gallinarum EG2]
gi|355380144|gb|EHG27289.1| hypothetical protein HMPREF9478_02499 [Enterococcus saccharolyticus
30_1]
Length = 502
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 144/348 (41%), Positives = 205/348 (58%), Gaps = 16/348 (4%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG AQTG+GKT AF LP+L+ + + A +Q V++PTRELAIQ E+
Sbjct: 38 GRDVIGQAQTGTGKTAAFGLPMLEKI-DPANHQ-----LQGLVIAPTRELAIQTQEELYR 91
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG +R + GG D+ +Q L RPHIVV TPGR++DH+ N LGT++ LVLD
Sbjct: 92 LGKDKKIRVQAVYGGADIGRQIRQLKDRPHIVVGTPGRMLDHI-NRHTLKLGTVETLVLD 150
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD +LN F + +++I++ +P RQT LFSATM +K + +KNP ++ +K T
Sbjct: 151 EADEMLNMGFLEDIEKIISQVPEERQTLLFSATMPPAIKSIGVKFMKNPEHVQIKAKEMT 210
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEV----SASSTMVFTRTCDATRLLALMLRNLGQRA 244
D + Q Y + KD I+T + + T+VF RT LA L G +A
Sbjct: 211 ADLIDQYY----VRSKDYEKFDIMTRLLDVQTPELTIVFGRTKRRVDELARGLEARGYKA 266
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G +SQ KR+ L FK+G +IL+ TDVA+RGLDI V V NYDIP + + Y+HR
Sbjct: 267 EGIHGDLSQQKRMSVLRSFKSGHLDILVATDVAARGLDISGVTHVYNYDIPQDPESYVHR 326
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL-PEFPAEEEEVL 351
+GRT RAG+ G++++ V E+ + IE L K++ P P E+E
Sbjct: 327 IGRTGRAGKGGISVTFVTPNEMSYLHVIENLTKKRMSPMRPPTEKEAF 374
>gi|212533429|ref|XP_002146871.1| ATP-dependent RNA helicase (Drs1), putative [Talaromyces marneffei
ATCC 18224]
gi|210072235|gb|EEA26324.1| ATP-dependent RNA helicase (Drs1), putative [Talaromyces marneffei
ATCC 18224]
Length = 826
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 139/316 (43%), Positives = 191/316 (60%), Gaps = 6/316 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKTGAF +PIL+ LL QR VP +L PTRELA+Q
Sbjct: 341 GKDVVGGAVTGSGKTGAFIIPILERLLY---RQRKVPTSRVAILMPTRELAVQCFNVATK 397
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + L+GG + +Q L KRP I++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 398 LATYTDITFCQLIGGFSLREQENILKKRPDIIIATPGRFIDHMRNSSSFTVDTLEILVLD 457
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EIL IP+ RQT LFSATMT V KL R L PV++ +K T
Sbjct: 458 EADRMLEDGFADELNEILTTIPKSRQTMLFSATMTDSVDKLIRVGLNRPVRLMVDAKKQT 517
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
TL Q++ R P + L+++ +V S ++F R + ++ G +A
Sbjct: 518 AGTLVQEFVRLRPGREDKRLASLIHLCQQVYTSRVIIFFRQKKEAHRVRVIFGLFGLKAA 577
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ ++ F+ G+ L+ TDVASRGLDI V+ VINY+ P + Y+HRV
Sbjct: 578 ELHGSMSQEQRIKSVEDFRDGKVAFLLATDVASRGLDIKGVETVINYEAPQTHEIYLHRV 637
Query: 306 GRTARAGRTGVAISLV 321
GRTARAGR+G A +L
Sbjct: 638 GRTARAGRSGRACTLA 653
>gi|145588789|ref|YP_001155386.1| DEAD/DEAH box helicase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047195|gb|ABP33822.1| DEAD/DEAH box helicase domain protein [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 473
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 153/350 (43%), Positives = 213/350 (60%), Gaps = 15/350 (4%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPA---FFACVLSPTRELAIQISE 64
AG DL+G AQTG+GKT AF LPI+Q +L A N + PA A VL+PTRELA+Q++E
Sbjct: 64 AGSDLMGAAQTGTGKTAAFVLPIIQQILRHASNSAS-PARHPIRALVLTPTRELAVQVAE 122
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
+ LR AV+ GGVDM +Q L I++ATPGRL+DH+ +K +L ++
Sbjct: 123 NAASYSKHTDLRAAVVYGGVDMKEQVAILRNGVEILIATPGRLLDHI-GSKVANLSQVEI 181
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L I+++IP RQT LFSAT + ++KKL ++ L+ PV +E A
Sbjct: 182 LVLDEADRMLDMGFLPDLQRIIDLIPAQRQTLLFSATFSPEIKKLAQSYLRTPVTVEVAR 241
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTC---DATRL----LALML 237
+ + DT+KQ V + K +V +L A + + +R C +RL LA L
Sbjct: 242 QNAAADTVKQVVHMVSSGDKQRAIVKVL---EARTRLGLSRQCIIFTNSRLGCAKLARAL 298
Query: 238 RNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTN 297
G +A I G SQ +R L+ FK+G L+ TDVA+RGLDIP + VIN+++P N
Sbjct: 299 ERDGIKAGAIHGDKSQGERTLTLDAFKSGAIEALVATDVAARGLDIPDMPCVINHELPYN 358
Query: 298 SKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEE 347
++D+IHR+GRT RAG G AI+LV+ E IEKL+ +KL P E
Sbjct: 359 AEDFIHRIGRTGRAGSKGDAIALVDASEKRLLDDIEKLMKRKLDVKPLPE 408
>gi|444379626|ref|ZP_21178803.1| ATP-dependent RNA helicase [Enterovibrio sp. AK16]
gi|443676355|gb|ELT83059.1| ATP-dependent RNA helicase [Enterovibrio sp. AK16]
Length = 410
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 143/335 (42%), Positives = 202/335 (60%), Gaps = 7/335 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVP-AFFACVLSPTRELAIQISEQFE 67
GKD++G AQTG+GKT AF LP++ LLE R V + +++PTRELA Q+ ++
Sbjct: 39 GKDVMGAAQTGTGKTAAFTLPLIHQLLE-----RGVKGSARVLIVTPTRELAQQVYDKVA 93
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
G SL+C L GG ++ Q L K+P I+V TPGRL+DHL + L +L LVL
Sbjct: 94 EYGQHTSLKCVALYGGANINPQKNQLAKKPEIIVGTPGRLLDHL-HIGTLQLNSLDTLVL 152
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L+ F + ++ +P+ RQT FSAT K+V L L +PV++E ++ S
Sbjct: 153 DEADRMLDMGFISDIKRLMKKMPKERQTLFFSATYPKQVMDLAYRLLNDPVRVEVSTANS 212
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
T +T+ Q V K K L Y++ + +VF +T +T LA L+ G A I
Sbjct: 213 TAETVNQLVHPVDRKRKRELLSYLIGSRNLQQVLVFAKTRQSTEALANELKLDGLAAEAI 272
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +Q R AL FK G +L+ TDVA+RGLDIPS+D V NY++P +DYIHR+GR
Sbjct: 273 HGEKTQGARNRALEGFKNGTVRVLVATDVAARGLDIPSLDTVFNYELPHQPEDYIHRIGR 332
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPE 342
T RAG++G+AISLV++ E IE LI ++LP+
Sbjct: 333 TGRAGKSGMAISLVSREEEGMLNAIETLIDQRLPQ 367
>gi|402077170|gb|EJT72519.1| ATP-dependent RNA helicase DRS1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 827
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 139/318 (43%), Positives = 198/318 (62%), Gaps = 6/318 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G AQTGSGKTGAF +PIL+ LL + VP VL+PTRELAIQ
Sbjct: 320 GKDVVGGAQTGSGKTGAFMVPILERLLY---RPKKVPTSRVVVLTPTRELAIQCHAVAIK 376
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L S ++ + VGG+ + Q L RP +++ATPGR +DH+ N+ F++ T++ LVLD
Sbjct: 377 LASHTDIKFCLAVGGLSLKVQEAELRLRPDVIIATPGRFIDHMRNSASFAVDTVEILVLD 436
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EIL +P+ RQT LFSATMT V L RA L PV+I S+ T
Sbjct: 437 EADRMLEDGFADELNEILTTLPKSRQTMLFSATMTSSVDTLIRAGLNKPVRIMVDSQKKT 496
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
V TL Q++ R P + + YLV++ ++ ++F R ++ LG
Sbjct: 497 VGTLVQEFVRLRPGREEKRMGYLVHLCKKLYTERVIIFFRQKKIAHHARIIFGLLGLSCA 556
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G M+Q++R+ ++ F+ G+ + L+ TD+ASRGLDI VD VINY+ P + + Y+HRV
Sbjct: 557 ELHGSMNQTQRIQSVEDFRDGKVSFLLATDLASRGLDIKGVDTVINYEAPQSLEIYVHRV 616
Query: 306 GRTARAGRTGVAISLVNQ 323
GRTARAGR+GVA++L +
Sbjct: 617 GRTARAGRSGVAVTLAAE 634
>gi|350290558|gb|EGZ71772.1| DEAD-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 865
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 137/318 (43%), Positives = 195/318 (61%), Gaps = 6/318 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKT AF +PIL+ LL + VP +L+PTRELAIQ
Sbjct: 331 GKDVVGGAVTGSGKTAAFVVPILERLLY---RPKKVPTTRVVILTPTRELAIQCHAVAVK 387
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L S ++ + VGG+ + Q L RP +V+ATPGR +DH+ N+ F++ T++ LVLD
Sbjct: 388 LASHTDIKFCLAVGGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVDTIEILVLD 447
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EIL +P+ RQT LFSATMT V +L RA L PV+I A S+ T
Sbjct: 448 EADRMLEDGFADELNEILTTLPKSRQTMLFSATMTSSVDRLIRAGLNKPVRIMADSQKKT 507
Query: 189 VDTLKQQY-RFVPAKY--KDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
TL Q++ R P + ++ YL++I + ++F R + ++ G
Sbjct: 508 AGTLVQEFVRLRPGRESKREGYLLHICKTIYTERVIIFFRQKKIAHKMRIIFGLFGLSCA 567
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G M+Q++R+ ++ F+ G+ N L+ TD+ASRGLDI VD VINY+ P + Y+HRV
Sbjct: 568 ELHGSMNQAQRIQSVEDFRDGKVNFLLATDLASRGLDIKGVDTVINYEAPQTPEIYVHRV 627
Query: 306 GRTARAGRTGVAISLVNQ 323
GRTARAGR+G AI+L +
Sbjct: 628 GRTARAGRSGTAITLAAE 645
>gi|142982611|sp|P0C2N8.1|DRS1_NEUCR RecName: Full=ATP-dependent RNA helicase drs-1
Length = 829
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 137/318 (43%), Positives = 195/318 (61%), Gaps = 6/318 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKT AF +PIL+ LL + VP +L+PTRELAIQ
Sbjct: 330 GKDVVGGAVTGSGKTAAFVVPILERLLY---RPKKVPTTRVVILTPTRELAIQCHAVAVK 386
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L S ++ + VGG+ + Q L RP +V+ATPGR +DH+ N+ F++ T++ LVLD
Sbjct: 387 LASHTDIKFCLAVGGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVDTIEILVLD 446
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EIL +P+ RQT LFSATMT V +L RA L PV+I A S+ T
Sbjct: 447 EADRMLEDGFADELNEILTTLPKSRQTMLFSATMTSSVDRLIRAGLNKPVRIMADSQKKT 506
Query: 189 VDTLKQQY-RFVPAKY--KDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
TL Q++ R P + ++ YL++I + ++F R + ++ G
Sbjct: 507 AGTLVQEFVRLRPGRESKREGYLLHICKTIYTERVIIFFRQKKIAHKMRIIFGLFGLSCA 566
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G M+Q++R+ ++ F+ G+ N L+ TD+ASRGLDI VD VINY+ P + Y+HRV
Sbjct: 567 ELHGSMNQAQRIQSVEDFRDGKVNFLLATDLASRGLDIKGVDTVINYEAPQTPEIYVHRV 626
Query: 306 GRTARAGRTGVAISLVNQ 323
GRTARAGR+G AI+L +
Sbjct: 627 GRTARAGRSGTAITLAAE 644
>gi|225561576|gb|EEH09856.1| ATP-dependent RNA helicase DRS1 [Ajellomyces capsulatus G186AR]
Length = 829
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 139/318 (43%), Positives = 194/318 (61%), Gaps = 6/318 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKTGAF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 342 GKDVVGGAVTGSGKTGAFIIPILERLLY---RPRKVPTSRVAILMPTRELAVQCYNVATK 398
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + LVGG + +Q L KRP +++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 399 LATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLD 458
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EIL IP+ RQT LFSATMT V KL R L PV++ +K T
Sbjct: 459 EADRMLEDGFTDELNEILTTIPKSRQTMLFSATMTNNVDKLIRVGLNRPVRLMVDAKKQT 518
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
V TL Q++ R P + + YL+ + + +VF R+ + ++ LG +
Sbjct: 519 VGTLIQEFVRLRPGREEKRLGYLIVLCKNIYKDRVIVFFRSKKEAHRVRIIFGLLGLKVT 578
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ ++ F+ G+ + L+ TDVASRGLDI V+ VINY+ P + + Y+HRV
Sbjct: 579 ELHGSMSQEQRIKSVESFRDGKVSFLLATDVASRGLDIKGVETVINYEAPQSHEIYLHRV 638
Query: 306 GRTARAGRTGVAISLVNQ 323
GRTARAGR+G A +L +
Sbjct: 639 GRTARAGRSGRACTLAAE 656
>gi|164428960|ref|XP_001728501.1| hypothetical protein NCU11175 [Neurospora crassa OR74A]
gi|157072353|gb|EDO65410.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 857
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 137/318 (43%), Positives = 195/318 (61%), Gaps = 6/318 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKT AF +PIL+ LL + VP +L+PTRELAIQ
Sbjct: 330 GKDVVGGAVTGSGKTAAFVVPILERLLY---RPKKVPTTRVVILTPTRELAIQCHAVAVK 386
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L S ++ + VGG+ + Q L RP +V+ATPGR +DH+ N+ F++ T++ LVLD
Sbjct: 387 LASHTDIKFCLAVGGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVDTIEILVLD 446
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EIL +P+ RQT LFSATMT V +L RA L PV+I A S+ T
Sbjct: 447 EADRMLEDGFADELNEILTTLPKSRQTMLFSATMTSSVDRLIRAGLNKPVRIMADSQKKT 506
Query: 189 VDTLKQQY-RFVPAKY--KDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
TL Q++ R P + ++ YL++I + ++F R + ++ G
Sbjct: 507 AGTLVQEFVRLRPGRESKREGYLLHICKTIYTERVIIFFRQKKIAHKMRIIFGLFGLSCA 566
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G M+Q++R+ ++ F+ G+ N L+ TD+ASRGLDI VD VINY+ P + Y+HRV
Sbjct: 567 ELHGSMNQAQRIQSVEDFRDGKVNFLLATDLASRGLDIKGVDTVINYEAPQTPEIYVHRV 626
Query: 306 GRTARAGRTGVAISLVNQ 323
GRTARAGR+G AI+L +
Sbjct: 627 GRTARAGRSGTAITLAAE 644
>gi|241767199|ref|ZP_04764950.1| DEAD/DEAH box helicase domain protein [Acidovorax delafieldii 2AN]
gi|241362168|gb|EER58246.1| DEAD/DEAH box helicase domain protein [Acidovorax delafieldii 2AN]
Length = 489
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 142/335 (42%), Positives = 203/335 (60%), Gaps = 5/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
GKD++G AQTG+GKT AF+LP+LQ LL+ E+ T PA A VL PTRELA Q+++Q
Sbjct: 40 GKDVMGAAQTGTGKTAAFSLPLLQRLLK-HESSSTSPARHPVRALVLLPTRELADQVAQQ 98
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
LR V+ GG+DM QTL L K ++VATPGRL+DH+ K L ++Y+
Sbjct: 99 IALYAKYTKLRSTVVFGGMDMKPQTLELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYV 157
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++K+L + L++P+ IE A
Sbjct: 158 VLDEADRMLDIGFLPDLQRILSYLPKQRTTLLFSATFSPEIKRLAGSYLQDPITIEVARP 217
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
T T++Q + K + +L +F + LA L G +
Sbjct: 218 NETASTVEQHFYSANDDDKRHAIHQVLKSRGIKQAFIFVNSKLGCARLARSLEREGLKTA 277
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL+ FK G ++L+CTDVA+RGLDI V V N+D+P N++DY+HR+
Sbjct: 278 ALHGDKSQDERLKALDAFKQGAVDLLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRI 337
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
GRT RAG +G+A++LV+ + IEKL+ KK+
Sbjct: 338 GRTGRAGASGLAVTLVSGSDARLVADIEKLLKKKI 372
>gi|187923247|ref|YP_001894889.1| DEAD/DEAH box helicase [Burkholderia phytofirmans PsJN]
gi|187714441|gb|ACD15665.1| DEAD/DEAH box helicase domain protein [Burkholderia phytofirmans
PsJN]
Length = 489
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 158/380 (41%), Positives = 221/380 (58%), Gaps = 20/380 (5%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT +F+LPI+Q LL A + PA A +L+PTRELA Q++
Sbjct: 47 AGRDMMGAAQTGTGKTASFSLPIIQRLLPQASTSAS-PARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
+A +LR AV+ GGVDM Q+ L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVQAYAKHTALRSAVVFGGVDMNPQSEQLRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSGEIKKLAATYLRNPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
ST + Q V K +V ++ E +VF + LA L G A
Sbjct: 225 SNSTATNVTQVVYEVAEGDKTGAVVQLIRERGLKQVIVFCNSKIGASRLARSLERDGVVA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G +Q++R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 TAIHGDRTQNERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP------EFPA--EEEEVLLLLER 356
+GRT RAG +G A+SL + E + IEKLI + L E P EE ER
Sbjct: 345 IGRTGRAGASGDALSLCSPNERKQLADIEKLIKRPLDVQRLTVEAPVRHHHEERAPRRER 404
Query: 357 VTEAKRISQMTIKDSGNKRR 376
+E + +D G++RR
Sbjct: 405 SSEGR-------EDRGSRRR 417
>gi|254251800|ref|ZP_04945118.1| DEAD/DEAH box helicase-like [Burkholderia dolosa AUO158]
gi|124894409|gb|EAY68289.1| DEAD/DEAH box helicase-like [Burkholderia dolosa AUO158]
Length = 511
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 151/336 (44%), Positives = 201/336 (59%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 69 AGRDVMGAAQTGTGKTASFSLPIIQRLLPQA-NTSASPARHPVRALILTPTRELADQVAA 127
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A LR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 128 NVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 186
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 187 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVAR 246
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
ST + Q V K +V +L E +VF + LA L G A
Sbjct: 247 SNSTNANVTQIVYDVAEGDKQAAVVQLLRERGLKQVIVFCNSKIGASRLARQLERDGVVA 306
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQ +R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 307 SAIHGDKSQLERMQALDAFKRGEVEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 366
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG TG A+SL + E + IEKLI + L
Sbjct: 367 IGRTGRAGATGDALSLCSPNERKQLADIEKLIKRPL 402
>gi|317132682|ref|YP_004091996.1| DEAD/DEAH box helicase [Ethanoligenens harbinense YUAN-3]
gi|315470661|gb|ADU27265.1| DEAD/DEAH box helicase domain protein [Ethanoligenens harbinense
YUAN-3]
Length = 435
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 138/332 (41%), Positives = 199/332 (59%), Gaps = 1/332 (0%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+DL+G AQTG+GKT AFA+PIL L A VLSPTRELAIQI E F+
Sbjct: 39 RDLLGTAQTGTGKTAAFAVPILDLLCREHGQSTGSRHIRALVLSPTRELAIQIKESFDQY 98
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
+ LR V+ GGV + Q L + I+VATPGRL+D L N + L + Y VLDE
Sbjct: 99 SRFLHLRNTVIFGGVSQIPQVSRLREGVDILVATPGRLLD-LMNQRHVDLSHVSYFVLDE 157
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADR+L+ F + +++ +P+ RQT LFSATM + +L LKNP ++ A ST
Sbjct: 158 ADRMLDMGFIHDVHKVVEKLPQNRQTLLFSATMPPDIARLADKLLKNPAQVSVAPVSSTA 217
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
+T++Q+ +V K K LV++L S +VF+RT + L G + I G
Sbjct: 218 ETVEQKLFYVDKKNKKHLLVHLLKTADMESVLVFSRTKHGANKIVEHLEKAGIPSKAIHG 277
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+ SQS R AL +FK+ + ++L+ TD+A+RG+D+ + VINYD+P + Y+HR+GRT
Sbjct: 278 NKSQSARQQALREFKSRKIHVLVATDIAARGIDVTELSHVINYDLPNEPETYVHRIGRTG 337
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
RAG++G+A S ++ E ++ IE+LIGK +P
Sbjct: 338 RAGQSGMAFSFCDEEEHDYLRTIERLIGKHIP 369
>gi|255533359|ref|YP_003093731.1| DEAD/DEAH box helicase [Pedobacter heparinus DSM 2366]
gi|255346343|gb|ACU05669.1| DEAD/DEAH box helicase domain protein [Pedobacter heparinus DSM
2366]
Length = 437
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 142/332 (42%), Positives = 202/332 (60%), Gaps = 1/332 (0%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+DL+G AQTG+GKT AFA+P+LQ L + N + A VL+PTRELAIQI E F+A
Sbjct: 39 RDLLGCAQTGTGKTAAFAIPMLQLLSKPHTNTKIHKVIKALVLTPTRELAIQIEESFKAY 98
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
G + +R V+ GGV QT AL + I+VATPGRL+D L N +L ++ VLDE
Sbjct: 99 GKNLPIRHLVIFGGVGQKAQTDALHRGVDILVATPGRLLD-LMNQGFINLRDIEIFVLDE 157
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADR+L+ F + +++ +P RQT FSATM K+++ L L NPVK+E ST
Sbjct: 158 ADRMLDMGFIHDVKKVIAKLPAKRQTLFFSATMPKEIQGLADTILTNPVKVEVTPVSSTA 217
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
+ ++Q+ +V K L++IL + + + +VF RT + L +G +A I G
Sbjct: 218 EKIRQEIFYVEKGDKKGLLMHILQDKTIETALVFARTKHGADRIVKDLIKVGVKAEAIHG 277
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+ SQ+ R AL FKA IL+ TD+A+RG+D+ + VINY++P + Y+HR+GRT
Sbjct: 278 NKSQNARQRALTNFKAKTTRILVATDIAARGIDVDELSHVINYELPNIPETYVHRIGRTG 337
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
RAG +G A+S + E E+ IEKLIG KLP
Sbjct: 338 RAGLSGTALSFCDAEEKEFLDDIEKLIGLKLP 369
>gi|71908923|ref|YP_286510.1| helicase, C-terminal:DEAD/DEAH box helicase, N-terminal, partial
[Dechloromonas aromatica RCB]
gi|71848544|gb|AAZ48040.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
[Dechloromonas aromatica RCB]
Length = 507
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 149/346 (43%), Positives = 207/346 (59%), Gaps = 10/346 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
+GKD++G AQTG+GKT AF LPILQ +L A + + PA A +L+PTRELA+Q+ E
Sbjct: 59 SGKDIMGGAQTGTGKTAAFTLPILQRILPFASSSPS-PAKHPVRALILAPTRELAMQVFE 117
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
+ +R GGVD+ Q L K I+VATPGRL+DH+ N K S +++
Sbjct: 118 SVKTYSKHTPIRAMCAYGGVDIRPQIAELKKGVEILVATPGRLLDHVEN-KSVSFNSVQA 176
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F + ILN++P RQ+ LFSAT ++++KKL LK+P+ IE A
Sbjct: 177 LVLDEADRMLDMGFVPDVTRILNMLPAQRQSLLFSATFSEEIKKLADTMLKSPILIEVAR 236
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
+ DT+ + V K L +L +VF RT L L+ G +A
Sbjct: 237 RNQVSDTITHRVHPVSEYGKRGLLTKLLKSGEIRQCIVFCRTKQGCSRLTRELQRAGIKA 296
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQ +R+ AL FK GE + LI TDVA+RGLD+ + VINY++P +DY+HR
Sbjct: 297 DAIHGDKSQLERIKALEAFKGGETDALIATDVAARGLDVDDLPYVINYELPHTPEDYVHR 356
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEV 350
+GRT RAG+ G AISLV+ +E+ + + IEKLI + P E+ EV
Sbjct: 357 IGRTGRAGKKGNAISLVSAHEVCYLVDIEKLIKR-----PIEQVEV 397
>gi|253575100|ref|ZP_04852439.1| ATP-dependent RNA helicase DeaD [Paenibacillus sp. oral taxon 786
str. D14]
gi|251845556|gb|EES73565.1| ATP-dependent RNA helicase DeaD [Paenibacillus sp. oral taxon 786
str. D14]
Length = 410
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 155/372 (41%), Positives = 214/372 (57%), Gaps = 6/372 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+G+DL+G AQTG+GKT AFA+P LQ L + + A V++PTRELA+QI E F
Sbjct: 37 SGQDLLGCAQTGTGKTAAFAIPTLQLLHKDGAPRAGRRNIRALVITPTRELALQIYENFC 96
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
A G + L+CAV+ GGV Q AL K I+VATPGRL D L K L ++ L+L
Sbjct: 97 AYGKYLPLKCAVIFGGVSQKPQEAALQKGVDILVATPGRLND-LMQQKLIDLKNVELLIL 155
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L+ F + +I+ P RQT LFSATM + ++ + L+NPVK+E S
Sbjct: 156 DEADRMLDMGFIHDVKKIIAKTPSQRQTLLFSATMPDAIAQMADSILRNPVKVEITPVSS 215
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDT+ Q +V K L+++L + S S +VFTRT L L A I
Sbjct: 216 TVDTIGQYLYYVDKGNKRDLLIHLLKDPSIESAIVFTRTKHGADRLVRHLTKAQVSAKAI 275
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G SQ R AL FK +L+ TD+A+RG+DI + VINY++P + Y+HR+GR
Sbjct: 276 HGDKSQGARQTALQDFKNRTLRVLVATDIAARGIDIDELSHVINYELPNIPETYVHRIGR 335
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP---EFPAEEEEVLLLLERVTEAKRIS 364
T RAG++GVAIS + E + IEKLIGK++P E P ++ L + V A+
Sbjct: 336 TGRAGQSGVAISFCDFDEKPYLADIEKLIGKRIPVIKEHPYPMQQTALAPKPVQPARESK 395
Query: 365 QMTIKDSGNKRR 376
+ T +S N +R
Sbjct: 396 KRT--ESLNTKR 405
>gi|300779365|ref|ZP_07089223.1| ATP-dependent RNA helicase RhlE [Chryseobacterium gleum ATCC 35910]
gi|300504875|gb|EFK36015.1| ATP-dependent RNA helicase RhlE [Chryseobacterium gleum ATCC 35910]
Length = 434
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 157/397 (39%), Positives = 229/397 (57%), Gaps = 26/397 (6%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G AQTG+GKT AF++PILQ L ++N+ A +L+PTRELAIQI E A
Sbjct: 38 GRDFLGCAQTGTGKTAAFSIPILQNL---SKNKIPNKHIKALILTPTRELAIQIEENINA 94
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLVL 127
G + L+ V+ GGV Q AL K I+VATPGRL+D + +G SL L+ VL
Sbjct: 95 YGKYLPLKQLVIFGGVKQGNQEAALKKGVDILVATPGRLLDFIA--QGIISLKNLEIFVL 152
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L+ F + ++ ++P+ RQT FSATM +++KL + L NPVK+E S
Sbjct: 153 DEADRMLDMGFVHDVKRVIKLLPQRRQTLFFSATMPGEIQKLANSILNNPVKVEVTPVSS 212
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
T DT+KQ FV K L +IL + S +VF RT ++ L+ A I
Sbjct: 213 TADTIKQSVYFVEKDNKLNLLSHILKNDISDSVLVFARTKHGADKISRKLQKDNISAEAI 272
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G+ SQ+ R ALN FK+G+ +L+ TD+A+RG+DI + VIN+++ S+ Y+HR+GR
Sbjct: 273 HGNKSQNARQNALNNFKSGKTRVLVATDIAARGIDIDELKFVINFELSDVSETYVHRIGR 332
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP---EFPAEEEEVLLLLERVTEAKRIS 364
T RAG G +IS V+ +L EKLIGKK+P + P ++++ A++
Sbjct: 333 TGRAGAEGTSISFVDGLDLLNLKNTEKLIGKKIPVVKDHPFHTDDLV--------AQK-- 382
Query: 365 QMTIKDSGNKRRRKGGDE---DDDIGRQFGINKKKLS 398
+DS NK GG++ ++ + G N+KK S
Sbjct: 383 ----RDSNNKPVPAGGEKPKASNNNNSRSGKNRKKPS 415
>gi|73540223|ref|YP_294743.1| helicase [Ralstonia eutropha JMP134]
gi|72117636|gb|AAZ59899.1| Helicase, C-terminal:Type III restriction enzyme, res
subunit:DEAD/DEAH box helicase, N-terminal [Ralstonia
eutropha JMP134]
Length = 506
Score = 257 bits (656), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 145/332 (43%), Positives = 199/332 (59%), Gaps = 1/332 (0%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G DL+ AQTG+GKT F LP+LQ L E A ++ PA A VL+PTRELA Q+ E
Sbjct: 38 GGDLLAGAQTGTGKTAGFTLPMLQLLSESAPQRQGKPAVRALVLTPTRELAAQVEESVRN 97
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G + LR V+ GGV + Q L + IVVATPGRL+DH++ + L +++ LVLD
Sbjct: 98 YGKYVRLRSMVMFGGVGINPQIEQLRRGVEIVVATPGRLLDHVSQ-RTIDLSSVELLVLD 156
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F + +ILNV+P RQ LFSAT + ++ L L NP IE A + +T
Sbjct: 157 EADRMLDMGFIHDIRKILNVLPPKRQNLLFSATFSDDIRALADRLLNNPASIEVARRNTT 216
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
+T+ Q+ V + K L +++ E +VFTRT LA L G A+ I
Sbjct: 217 AETVAQRVYPVDRERKRELLAHLVREHDWHQVLVFTRTKHGANRLAEQLTKDGLSALAIH 276
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQS R AL++FKAG +L+ TD+A+RG+DI + V+N+D+P +DY+HR+GRT
Sbjct: 277 GNKSQSARTRALSEFKAGTLRLLVATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRT 336
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
RAG G AISLV E IE+LI +KL
Sbjct: 337 GRAGAEGEAISLVCVDEHGLLRDIERLIKRKL 368
>gi|447911698|ref|YP_007393110.1| Cold-shock DEAD-box protein A [Enterococcus faecium NRRL B-2354]
gi|445187407|gb|AGE29049.1| Cold-shock DEAD-box protein A [Enterococcus faecium NRRL B-2354]
Length = 503
Score = 257 bits (656), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 147/345 (42%), Positives = 209/345 (60%), Gaps = 13/345 (3%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKD+IG AQTG+GKT AF LP+L+ +I +++ + V++PTRELAIQ E+
Sbjct: 37 AGKDVIGQAQTGTGKTAAFGLPMLE---KIDPDRQELQGL---VIAPTRELAIQTQEELY 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
LG +R + GG D+ +Q L RPHIVV TPGR++DH+ N LGT++ LVL
Sbjct: 91 RLGRDKKVRVQAVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHI-NRHTLKLGTVQTLVL 149
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEAD +LN F + +++I++ +P RQT LFSATM +K + +KNP ++ +K
Sbjct: 150 DEADEMLNMGFLEDIEKIISQVPDQRQTLLFSATMPPAIKNIGVKFMKNPHHVKIKAKEM 209
Query: 188 TVDTLKQQYRFVPAK-YKDCYLVYILTEVSASS-TMVFTRTCDATRLLALMLRNLGQRAI 245
T D + Q Y V AK Y+ ++ L +V T+VF RT LA L G RA
Sbjct: 210 TADLIDQYY--VRAKEYEKFDIMTRLFDVQTPELTIVFGRTKRRVDELARGLEARGYRAE 267
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G +SQ KR+ L FK+G +IL+ TDVA+RGLDI V V NYDIP + + Y+HR+
Sbjct: 268 GIHGDLSQQKRMSVLRSFKSGHLDILVATDVAARGLDISGVTHVYNYDIPQDPESYVHRI 327
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEF--PAEEE 348
GRT RAG+ G++++ V E+++ IE L K++ P E+E
Sbjct: 328 GRTGRAGKGGMSVTFVTPNEMDYLHVIENLTKKRMTTLRPPTEKE 372
>gi|58038681|ref|YP_190645.1| ATP-dependent RNA helicase [Gluconobacter oxydans 621H]
gi|58001095|gb|AAW59989.1| ATP-dependent RNA helicase [Gluconobacter oxydans 621H]
Length = 431
Score = 257 bits (656), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 200/353 (56%), Gaps = 9/353 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVP--AFFACVLSPTRELAIQISEQF 66
G+DL+GLAQTG+GKT AFALPIL I N+R P A VL+PTRELA QI E F
Sbjct: 39 GRDLLGLAQTGTGKTAAFALPILN---HIFTNRRPAPPKGVRALVLAPTRELASQIGESF 95
Query: 67 EALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLV 126
A + AV+ GGV +Q + ++VA PGRL+D L K L TL+ LV
Sbjct: 96 AAYARHMKFSYAVVFGGVGQGRQIETTRRGVDVLVAAPGRLLD-LIGQKHIDLSTLEILV 154
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
LDEADR+L+ F + + I+ ++P+ RQT LFSATM + L + LKNP ++ +
Sbjct: 155 LDEADRMLDMGFVRDIQRIMALLPKQRQTLLFSATMPPSISDLAHSLLKNPATVQVTPES 214
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
STVD + Q FV + K + +L S + +VFT +A L G RA
Sbjct: 215 STVDRINQAVMFVDSGSKKDAALMLLESPSVARAVVFTLMKHEANKVAEFLNKNGIRAEA 274
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
I G+ SQ R A+ F++G L+ TD+A+RG+D+ V V NYD+P + Y+HR+G
Sbjct: 275 IHGNKSQGARERAMAGFRSGAIKALVATDIAARGIDVDEVSHVFNYDLPNVPESYVHRIG 334
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP---EFPAEEEEVLLLLER 356
RTARAGR G A+SL + + W IEK IGK +P + P EE L +R
Sbjct: 335 RTARAGREGCAVSLCDAEQRAWLKDIEKKIGKPIPVVTDHPFHSEEARLSTQR 387
>gi|119186507|ref|XP_001243860.1| hypothetical protein CIMG_03301 [Coccidioides immitis RS]
gi|118595360|sp|Q1E2B2.1|DRS1_COCIM RecName: Full=ATP-dependent RNA helicase DRS1
gi|392870577|gb|EAS32387.2| ATP-dependent RNA helicase DRS1 [Coccidioides immitis RS]
Length = 840
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 141/316 (44%), Positives = 192/316 (60%), Gaps = 6/316 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDL+G A TGSGKT AF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 356 GKDLVGGAVTGSGKTAAFIIPILERLLY---RPRKVPTSRVAILMPTRELAVQCYNVATK 412
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + LVGG + +Q L +RP +++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 413 LATYTDITFCQLVGGFSLREQENVLKQRPDVIIATPGRFIDHMRNSASFTVDTLEILVLD 472
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EILN IP+ RQT LFSATMT V KL R L PV++ SK T
Sbjct: 473 EADRMLEDGFADELNEILNTIPKSRQTMLFSATMTDSVDKLIRVGLNRPVRLMVDSKKHT 532
Query: 189 VDTLKQQY-RFVPAKY--KDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
V TL Q++ R P + + YLV + + + +VF R ++ LG +A
Sbjct: 533 VGTLVQEFVRLRPGREGKRMGYLVLLCNTIYTNRVIVFFRQKKEAHRARIIFGLLGLKAA 592
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ A+ F+ G+ L+ TD+ASRGLDI V+ VINY+ P + + Y+HRV
Sbjct: 593 ELHGSMSQEQRINAVEAFRDGKVPFLLATDLASRGLDIKGVESVINYEAPQSHEIYLHRV 652
Query: 306 GRTARAGRTGVAISLV 321
GRTARAGR+G A ++
Sbjct: 653 GRTARAGRSGRACTIA 668
>gi|433460289|ref|ZP_20417922.1| DEAD/DEAH box helicase [Halobacillus sp. BAB-2008]
gi|432191745|gb|ELK48677.1| DEAD/DEAH box helicase [Halobacillus sp. BAB-2008]
Length = 470
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 145/342 (42%), Positives = 204/342 (59%), Gaps = 10/342 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IG AQTG+GKT AF +P+L+ + + V A V++PTRELAIQ++E+
Sbjct: 20 GKDVIGQAQTGTGKTAAFGIPMLEKI------NKQVKAVQGLVIAPTRELAIQVAEELNR 73
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG G +R + GG +M +Q AL K HIVVATPGRL+DH+ K L ++ VLD
Sbjct: 74 LGKGKGVRVLPIYGGSNMERQIRAL-KNNHIVVATPGRLLDHIRR-KTIKLESVHTAVLD 131
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD +LN F + +IL +P RQT LFSATM K+++ + + +P +++ +K T
Sbjct: 132 EADEMLNMGFIDDIRDILKALPEERQTLLFSATMPKEIRDIATTLMNSPEEVKVKAKEMT 191
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ ++Q + +P K+K L +L S +VF RT +A L+ G A I
Sbjct: 192 VENIEQFFVEIPEKHKFDTLTRLLDIHDPSLAIVFGRTKRRVDEVADGLQARGFSAEGIH 251
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G ++Q KR+ LNKFK G IL+ TDVA+RGLDI V V N+DIP + + Y+HR+GRT
Sbjct: 252 GDLTQGKRMSTLNKFKRGRIEILVATDVAARGLDISDVTHVYNFDIPQDPESYVHRIGRT 311
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEF--PAEEE 348
RAGR G +IS V E + IEK+ KK+ P+ EE
Sbjct: 312 GRAGRKGKSISFVTPREKDQLHLIEKITKKKVERLKVPSSEE 353
>gi|452002395|gb|EMD94853.1| hypothetical protein COCHEDRAFT_1128751 [Cochliobolus
heterostrophus C5]
Length = 815
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 144/349 (41%), Positives = 207/349 (59%), Gaps = 11/349 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A+TGSGKT AF +PIL+ LL Q+ +P + PTRELA+Q
Sbjct: 326 GKDVVGGAETGSGKTAAFLIPILERLLY---RQKKIPTTRVAIFMPTRELAVQCFNVATK 382
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L S + A++ GG +Q L RP +V+ATPGR +DH+ NT F + L+ LVLD
Sbjct: 383 LASFTDITFALMAGGFSSREQEAVLKTRPDVVIATPGRFIDHMHNTAAFQVENLEILVLD 442
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L + FE L+EIL IP+ RQT LFSATMT V KL R + PV++ SK T
Sbjct: 443 EADRMLEEGFESQLNEILTTIPKSRQTMLFSATMTSSVDKLIRIGMDKPVRLMVDSKKQT 502
Query: 189 VDTLKQQYRFVPAKYKD---CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
V L Q++ + +D YL+YI ++ +VF R + ++ G +A
Sbjct: 503 VKGLTQEFVRLRQGKEDKRLAYLMYICEKIYTEKVIVFFRQKKEAHRVRVVFALCGLKAS 562
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G+MSQ +R+ A+ F++G+ + L+ TDVASRGLDI +V VINY+ P + Y+HRV
Sbjct: 563 ELHGNMSQEQRIQAVEAFRSGKSSYLLATDVASRGLDIKNVSTVINYEAPQTHEIYLHRV 622
Query: 306 GRTARAGRTGVAISLVNQYE---LEWYLQIEKLIGKKL--PEFPAEEEE 349
GRTARAGR+G A +L + + ++ ++ + G K+ + PAEE E
Sbjct: 623 GRTARAGRSGRACTLAAEPDRKVVKQAVKASREQGAKVVSRQVPAEETE 671
>gi|392967075|ref|ZP_10332493.1| DEAD/DEAH box helicase domain protein [Fibrisoma limi BUZ 3]
gi|387843872|emb|CCH54541.1| DEAD/DEAH box helicase domain protein [Fibrisoma limi BUZ 3]
Length = 421
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 140/332 (42%), Positives = 198/332 (59%), Gaps = 1/332 (0%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+DL+G AQTG+GKT AFA+PILQ L E + Q+ A +L+PTRELAIQI E F A
Sbjct: 39 RDLLGCAQTGTGKTAAFAIPILQLLHEDRKQQQGPRRIRALILTPTRELAIQIGESFAAY 98
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
G +++R V+ GGV Q AL +++ATPGRL+D L N SL + VLDE
Sbjct: 99 GRHLNVRHTVIFGGVSQHAQVNALKSGIDVLIATPGRLLD-LMNQGFISLRNIDLFVLDE 157
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADR+L+ F + +++ +P RQ+ FSATM V KL + L PVK+E ST
Sbjct: 158 ADRMLDMGFIHDVKKVIVKLPTQRQSLFFSATMPPDVAKLADSILNKPVKVEVTPVSSTA 217
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
DT++Q FV K LV++L + +S +VF RT +A L G +A I G
Sbjct: 218 DTIQQSVYFVDKNDKRKLLVHVLNDKRIASALVFARTKHGADKVAKDLVKAGIKAEAIHG 277
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+ SQ+ R AL+ FK+ + +L+ TD+A+RG+D+ + VINY++P + Y+HR+GRT
Sbjct: 278 NKSQNARQRALSNFKSRQTRVLVATDIAARGIDVEELSHVINYELPNVPETYVHRIGRTG 337
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
RAG G+A+S + E + I KLIGK +P
Sbjct: 338 RAGHNGIALSFCDAEETAYLKDIHKLIGKHVP 369
>gi|134093720|ref|YP_001098795.1| ATP-dependent RNA helicase [Herminiimonas arsenicoxydans]
gi|133737623|emb|CAL60666.1| ATP-dependent RNA helicase [Herminiimonas arsenicoxydans]
Length = 502
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 205/341 (60%), Gaps = 7/341 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G D++G AQTG+GKT F+LPI+Q L+ A N PA A +L+PTRELA Q++
Sbjct: 60 GMDVMGAAQTGTGKTAGFSLPIIQLLMAHA-NSSASPARHPVRALILTPTRELADQVAAN 118
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+A LR V+ GG+DM QT AL IV+ATPGRL+DH+ K +L + L
Sbjct: 119 VKAYSRHTPLRSLVVFGGMDMTPQTAALRGGVEIVIATPGRLLDHVQQ-KTINLSQTQIL 177
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
V+DEADR+L+ F L I+N++P+ RQ +FSAT + ++KKL LK+PV IE A
Sbjct: 178 VMDEADRMLDMGFLPDLQRIINLLPKQRQNLMFSATFSPEIKKLAATFLKDPVTIEVARS 237
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T + + Q V + K + +I+ E +VF+ T LA L + G +A
Sbjct: 238 NATAENVTQIIYKVEEEAKRDAVSFIIRERGLKQVIVFSNTKIGASRLARQLESEGVKAS 297
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G SQS+R+ AL +FK G +L+ TDVA+RGLDI + VIN+D+P N++DY+HR+
Sbjct: 298 AIHGDKSQSERMQALEQFKNGTIEVLVATDVAARGLDIAELPCVINFDLPYNAEDYVHRI 357
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAE 346
GRT RAG +G AISL + + + IEK+I K PAE
Sbjct: 358 GRTGRAGASGDAISLFSDKDARLLVDIEKMIKHKF--VPAE 396
>gi|431208676|ref|ZP_19500889.1| DEAD/DEAH box helicase [Enterococcus faecium E1620]
gi|430570682|gb|ELB09622.1| DEAD/DEAH box helicase [Enterococcus faecium E1620]
Length = 503
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 147/345 (42%), Positives = 208/345 (60%), Gaps = 13/345 (3%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKD+IG AQTG+GKT AF LP+L+ +I ++ + V++PTRELAIQ E+
Sbjct: 37 AGKDVIGQAQTGTGKTAAFGLPMLE---KIDPDRHELQGL---VIAPTRELAIQTQEELY 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
LG +R + GG D+ +Q L RPHIVV TPGR++DH+ N LGT++ LVL
Sbjct: 91 RLGRDKKVRVQAVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHI-NRHTLKLGTVQTLVL 149
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEAD +LN F + +++I++ +P RQT LFSATM +K + +KNP ++ +K
Sbjct: 150 DEADEMLNMGFLEDIEKIISQVPDQRQTLLFSATMPPAIKNIGVKFMKNPHHVKIKAKEM 209
Query: 188 TVDTLKQQYRFVPAK-YKDCYLVYILTEVSASS-TMVFTRTCDATRLLALMLRNLGQRAI 245
T D + Q Y V AK Y+ ++ L +V T+VF RT LA L G RA
Sbjct: 210 TADLIDQYY--VRAKEYEKFDIMTRLFDVQTPELTIVFGRTKRRVDELARGLEARGYRAE 267
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G +SQ KR+ L FK+G +IL+ TDVA+RGLDI V V NYDIP + + Y+HR+
Sbjct: 268 GIHGDLSQQKRMSVLRSFKSGHLDILVATDVAARGLDISGVTHVYNYDIPQDPESYVHRI 327
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEF--PAEEE 348
GRT RAG+ G++++ V E+++ IE L K++ P E+E
Sbjct: 328 GRTGRAGKGGMSVTFVTPNEMDYLHVIENLTKKRMTTLRPPTEKE 372
>gi|257867061|ref|ZP_05646714.1| helicase [Enterococcus casseliflavus EC30]
gi|257873396|ref|ZP_05653049.1| helicase [Enterococcus casseliflavus EC10]
gi|257877139|ref|ZP_05656792.1| helicase [Enterococcus casseliflavus EC20]
gi|257801117|gb|EEV30047.1| helicase [Enterococcus casseliflavus EC30]
gi|257807560|gb|EEV36382.1| helicase [Enterococcus casseliflavus EC10]
gi|257811305|gb|EEV40125.1| helicase [Enterococcus casseliflavus EC20]
Length = 507
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 144/349 (41%), Positives = 204/349 (58%), Gaps = 16/349 (4%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKD+IG AQTG+GKT AF LP+L+ + T V++PTRELAIQ E+
Sbjct: 37 AGKDVIGQAQTGTGKTAAFGLPMLEKI------DPTNHQLQGLVIAPTRELAIQTQEELY 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
LG +R + GG D+ +Q L RPHIVV TPGR++DH+ N LGT++ LVL
Sbjct: 91 RLGKDKKIRVQAVYGGADIGRQIRQLKDRPHIVVGTPGRMLDHI-NRHTLKLGTVETLVL 149
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEAD +LN F + +++I++ +P +RQT LFSATM +K + +K P ++ +K
Sbjct: 150 DEADEMLNMGFLEDIEKIISQVPDVRQTLLFSATMPPAIKNIGVKFMKEPEHVQIKAKEM 209
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEV----SASSTMVFTRTCDATRLLALMLRNLGQR 243
T D + Q Y + KD I+T + + T+VF RT LA L G +
Sbjct: 210 TADLIDQYY----VRSKDYEKFDIMTRLLDVQTPELTIVFGRTKRRVDELARGLEARGYK 265
Query: 244 AIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIH 303
A I G +SQ KR+ L FK+G+ +IL+ TDVA+RGLDI V V NYDIP + + Y+H
Sbjct: 266 AEGIHGDLSQQKRMSVLRSFKSGQLDILVATDVAARGLDISGVTHVYNYDIPQDPESYVH 325
Query: 304 RVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL-PEFPAEEEEVL 351
R+GRT RAG+ G++++ V E+ + IE L K++ P P E+E
Sbjct: 326 RIGRTGRAGKGGMSVTFVTPNEMSYLHVIENLTKKRMTPMRPPTEKEAF 374
>gi|354807813|ref|ZP_09041268.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus curvatus
CRL 705]
gi|354513709|gb|EHE85701.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus curvatus
CRL 705]
Length = 523
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 148/349 (42%), Positives = 200/349 (57%), Gaps = 16/349 (4%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKD+IG AQTG+GKT AF LPILQ L P A ++SPTRELAIQ E+
Sbjct: 37 AGKDVIGQAQTGTGKTAAFGLPILQNL------DLDNPNIQALIISPTRELAIQTQEELY 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
LG + V+ GG D+ +Q +L P I+V TPGRL+DH+ N + L +K LVL
Sbjct: 91 RLGRDRKAKVQVVYGGADIRRQIRSLKDHPQILVGTPGRLLDHI-NRRTVKLDHVKTLVL 149
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEAD +L+ F ++ I+ +P RQT LFSAT+ + K+ ++ + NP I+ SK
Sbjct: 150 DEADEMLDMGFVDDIESIIKQVPDQRQTLLFSATLPAPIMKIGKSFMTNPEMIKVKSKEL 209
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEV----SASSTMVFTRTCDATRLLALMLRNLGQR 243
T D + Q Y + KD I+T + S T++F RT L L+ G
Sbjct: 210 TADLIDQYY----VRAKDFEKFDIMTRLFDVQSPELTLIFGRTKRRVDELTRGLKARGYN 265
Query: 244 AIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIH 303
A I G +SQ KR+ L FKAG +IL+ TDVA+RGLDI V V NYDIP + Y+H
Sbjct: 266 AEGIHGDLSQQKRMSVLKSFKAGRLDILVATDVAARGLDISGVTHVYNYDIPQDPDSYVH 325
Query: 304 RVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKK-LPEFPAEEEEVL 351
R+GRT RAG++GV+++ V E+E+ IE L K+ LP P E+E
Sbjct: 326 RIGRTGRAGKSGVSVTFVTPNEMEYLHIIENLTKKRMLPLQPPTEKEAF 374
>gi|260558407|ref|ZP_05830603.1| helicase [Enterococcus faecium C68]
gi|261207113|ref|ZP_05921802.1| helicase [Enterococcus faecium TC 6]
gi|289567232|ref|ZP_06447617.1| ATP-dependent RNA helicase exp9 [Enterococcus faecium D344SRF]
gi|293556891|ref|ZP_06675452.1| ATP-dependent RNA helicase [Enterococcus faecium E1039]
gi|293567807|ref|ZP_06679148.1| cold-shock deAd box protein a [Enterococcus faecium E1071]
gi|294615128|ref|ZP_06695014.1| Putative ATP-dependent RNA helicase [Enterococcus faecium E1636]
gi|294617803|ref|ZP_06697416.1| ATP-dependent RNA helicase [Enterococcus faecium E1679]
gi|406579294|ref|ZP_11054526.1| DEAD/DEAH box helicase [Enterococcus sp. GMD4E]
gi|406581588|ref|ZP_11056725.1| DEAD/DEAH box helicase [Enterococcus sp. GMD3E]
gi|406584027|ref|ZP_11059065.1| DEAD/DEAH box helicase [Enterococcus sp. GMD2E]
gi|406589825|ref|ZP_11064245.1| DEAD/DEAH box helicase [Enterococcus sp. GMD1E]
gi|410938072|ref|ZP_11369930.1| DEAD/DEAH box helicase [Enterococcus sp. GMD5E]
gi|424789110|ref|ZP_18215819.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
V689]
gi|424953765|ref|ZP_18368708.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R494]
gi|424962400|ref|ZP_18376756.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1986]
gi|424963599|ref|ZP_18377803.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1190]
gi|424970725|ref|ZP_18384213.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1139]
gi|424978089|ref|ZP_18391038.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1123]
gi|425038208|ref|ZP_18442830.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 513]
gi|425058609|ref|ZP_18461987.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 504]
gi|425060636|ref|ZP_18463922.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 503]
gi|427397059|ref|ZP_18889685.1| hypothetical protein HMPREF9307_01861 [Enterococcus durans
FB129-CNAB-4]
gi|430820898|ref|ZP_19439518.1| DEAD/DEAH box helicase [Enterococcus faecium E0045]
gi|430823396|ref|ZP_19441967.1| DEAD/DEAH box helicase [Enterococcus faecium E0120]
gi|430826317|ref|ZP_19444503.1| DEAD/DEAH box helicase [Enterococcus faecium E0164]
gi|430828899|ref|ZP_19447010.1| DEAD/DEAH box helicase [Enterococcus faecium E0269]
gi|430834757|ref|ZP_19452759.1| DEAD/DEAH box helicase [Enterococcus faecium E0679]
gi|430836494|ref|ZP_19454473.1| DEAD/DEAH box helicase [Enterococcus faecium E0680]
gi|430839412|ref|ZP_19457353.1| DEAD/DEAH box helicase [Enterococcus faecium E0688]
gi|430843175|ref|ZP_19461076.1| DEAD/DEAH box helicase [Enterococcus faecium E1050]
gi|430850821|ref|ZP_19468578.1| DEAD/DEAH box helicase [Enterococcus faecium E1185]
gi|430853175|ref|ZP_19470905.1| DEAD/DEAH box helicase [Enterococcus faecium E1258]
gi|430858894|ref|ZP_19476513.1| DEAD/DEAH box helicase [Enterococcus faecium E1552]
gi|430861435|ref|ZP_19478942.1| DEAD/DEAH box helicase [Enterococcus faecium E1573]
gi|430866428|ref|ZP_19481705.1| DEAD/DEAH box helicase [Enterococcus faecium E1574]
gi|430892938|ref|ZP_19484559.1| DEAD/DEAH box helicase [Enterococcus faecium E1575]
gi|430952632|ref|ZP_19486438.1| DEAD/DEAH box helicase [Enterococcus faecium E1576]
gi|431000766|ref|ZP_19488247.1| DEAD/DEAH box helicase [Enterococcus faecium E1578]
gi|431234137|ref|ZP_19502906.1| DEAD/DEAH box helicase [Enterococcus faecium E1622]
gi|431256501|ref|ZP_19504856.1| DEAD/DEAH box helicase [Enterococcus faecium E1623]
gi|431303424|ref|ZP_19508271.1| DEAD/DEAH box helicase [Enterococcus faecium E1626]
gi|431380394|ref|ZP_19510775.1| DEAD/DEAH box helicase [Enterococcus faecium E1627]
gi|431441111|ref|ZP_19513326.1| DEAD/DEAH box helicase [Enterococcus faecium E1630]
gi|431506774|ref|ZP_19515600.1| DEAD/DEAH box helicase [Enterococcus faecium E1634]
gi|431725207|ref|ZP_19525416.1| DEAD/DEAH box helicase [Enterococcus faecium E1904]
gi|431744090|ref|ZP_19532962.1| DEAD/DEAH box helicase [Enterococcus faecium E2071]
gi|431747114|ref|ZP_19535916.1| DEAD/DEAH box helicase [Enterococcus faecium E2134]
gi|431760196|ref|ZP_19548798.1| DEAD/DEAH box helicase [Enterococcus faecium E3346]
gi|431765027|ref|ZP_19553551.1| DEAD/DEAH box helicase [Enterococcus faecium E4215]
gi|260075581|gb|EEW63887.1| helicase [Enterococcus faecium C68]
gi|260078741|gb|EEW66443.1| helicase [Enterococcus faecium TC 6]
gi|289160980|gb|EFD08895.1| ATP-dependent RNA helicase exp9 [Enterococcus faecium D344SRF]
gi|291589392|gb|EFF21199.1| cold-shock deAd box protein a [Enterococcus faecium E1071]
gi|291592070|gb|EFF23693.1| Putative ATP-dependent RNA helicase [Enterococcus faecium E1636]
gi|291595943|gb|EFF27223.1| ATP-dependent RNA helicase [Enterococcus faecium E1679]
gi|291600975|gb|EFF31266.1| ATP-dependent RNA helicase [Enterococcus faecium E1039]
gi|402922578|gb|EJX42943.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
V689]
gi|402938304|gb|EJX57320.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R494]
gi|402940682|gb|EJX59477.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1986]
gi|402948694|gb|EJX66809.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1190]
gi|402960765|gb|EJX77866.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1139]
gi|402963120|gb|EJX80012.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1123]
gi|403019904|gb|EJY32478.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 513]
gi|403038013|gb|EJY49253.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 504]
gi|403042418|gb|EJY53373.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 503]
gi|404455599|gb|EKA02443.1| DEAD/DEAH box helicase [Enterococcus sp. GMD4E]
gi|404459354|gb|EKA05720.1| DEAD/DEAH box helicase [Enterococcus sp. GMD3E]
gi|404464924|gb|EKA10437.1| DEAD/DEAH box helicase [Enterococcus sp. GMD2E]
gi|404470265|gb|EKA14916.1| DEAD/DEAH box helicase [Enterococcus sp. GMD1E]
gi|410733711|gb|EKQ75634.1| DEAD/DEAH box helicase [Enterococcus sp. GMD5E]
gi|425722385|gb|EKU85280.1| hypothetical protein HMPREF9307_01861 [Enterococcus durans
FB129-CNAB-4]
gi|430439035|gb|ELA49418.1| DEAD/DEAH box helicase [Enterococcus faecium E0045]
gi|430442109|gb|ELA52157.1| DEAD/DEAH box helicase [Enterococcus faecium E0120]
gi|430445197|gb|ELA54971.1| DEAD/DEAH box helicase [Enterococcus faecium E0164]
gi|430482561|gb|ELA59676.1| DEAD/DEAH box helicase [Enterococcus faecium E0269]
gi|430484826|gb|ELA61773.1| DEAD/DEAH box helicase [Enterococcus faecium E0679]
gi|430488294|gb|ELA64976.1| DEAD/DEAH box helicase [Enterococcus faecium E0680]
gi|430490870|gb|ELA67366.1| DEAD/DEAH box helicase [Enterococcus faecium E0688]
gi|430497924|gb|ELA73941.1| DEAD/DEAH box helicase [Enterococcus faecium E1050]
gi|430535180|gb|ELA75603.1| DEAD/DEAH box helicase [Enterococcus faecium E1185]
gi|430540997|gb|ELA81174.1| DEAD/DEAH box helicase [Enterococcus faecium E1258]
gi|430544740|gb|ELA84762.1| DEAD/DEAH box helicase [Enterococcus faecium E1552]
gi|430549900|gb|ELA89710.1| DEAD/DEAH box helicase [Enterococcus faecium E1573]
gi|430551656|gb|ELA91407.1| DEAD/DEAH box helicase [Enterococcus faecium E1574]
gi|430555404|gb|ELA94942.1| DEAD/DEAH box helicase [Enterococcus faecium E1575]
gi|430557231|gb|ELA96699.1| DEAD/DEAH box helicase [Enterococcus faecium E1576]
gi|430562425|gb|ELB01657.1| DEAD/DEAH box helicase [Enterococcus faecium E1578]
gi|430573163|gb|ELB11993.1| DEAD/DEAH box helicase [Enterococcus faecium E1622]
gi|430577603|gb|ELB16190.1| DEAD/DEAH box helicase [Enterococcus faecium E1623]
gi|430580065|gb|ELB18545.1| DEAD/DEAH box helicase [Enterococcus faecium E1626]
gi|430582262|gb|ELB20689.1| DEAD/DEAH box helicase [Enterococcus faecium E1627]
gi|430586467|gb|ELB24719.1| DEAD/DEAH box helicase [Enterococcus faecium E1630]
gi|430587161|gb|ELB25394.1| DEAD/DEAH box helicase [Enterococcus faecium E1634]
gi|430595854|gb|ELB33732.1| DEAD/DEAH box helicase [Enterococcus faecium E1904]
gi|430605718|gb|ELB43100.1| DEAD/DEAH box helicase [Enterococcus faecium E2071]
gi|430607222|gb|ELB44549.1| DEAD/DEAH box helicase [Enterococcus faecium E2134]
gi|430624005|gb|ELB60656.1| DEAD/DEAH box helicase [Enterococcus faecium E3346]
gi|430629510|gb|ELB65910.1| DEAD/DEAH box helicase [Enterococcus faecium E4215]
Length = 503
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 147/347 (42%), Positives = 208/347 (59%), Gaps = 12/347 (3%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKD+IG AQTG+GKT AF LP+L+ +I ++ + V++PTRELAIQ E+
Sbjct: 37 AGKDVIGQAQTGTGKTAAFGLPMLE---KIDPDRHELQGL---VIAPTRELAIQTQEELY 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
LG +R + GG D+ +Q L RPHIVV TPGR++DH+ N LGT++ LVL
Sbjct: 91 RLGRDKKVRVQAVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHI-NRHTLKLGTVQTLVL 149
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEAD +LN F + +++I++ +P RQT LFSATM +K + +KNP ++ +K
Sbjct: 150 DEADEMLNMGFLEDIEKIISQVPDQRQTLLFSATMPPAIKNIGVKFMKNPHHVKIKAKEM 209
Query: 188 TVDTLKQQYRFVPAK-YKDCYLVYILTEVSASS-TMVFTRTCDATRLLALMLRNLGQRAI 245
T D + Q Y V AK Y+ ++ L +V T+VF RT LA L G RA
Sbjct: 210 TADLIDQYY--VRAKEYEKFDIMTRLFDVQTPELTIVFGRTKRRVDELARGLEARGYRAE 267
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G +SQ KR+ L FK+G +IL+ TDVA+RGLDI V V NYDIP + + Y+HR+
Sbjct: 268 GIHGDLSQQKRMSVLRSFKSGHLDILVATDVAARGLDISGVTHVYNYDIPQDPESYVHRI 327
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEF-PAEEEEVL 351
GRT RAG+ G++++ V E+++ IE L K++ P E+E
Sbjct: 328 GRTGRAGKGGMSVTFVTPNEMDYLHVIENLTKKRMTTLRPPTEKEAF 374
>gi|419954669|ref|ZP_14470805.1| ATP-dependent RNA helicase [Pseudomonas stutzeri TS44]
gi|387968533|gb|EIK52822.1| ATP-dependent RNA helicase [Pseudomonas stutzeri TS44]
Length = 439
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 144/338 (42%), Positives = 205/338 (60%), Gaps = 12/338 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALL----EIAENQRTVPAFFACVLSPTRELAIQISE 64
G+DL+ AQTG+GKT FALP+LQ L ++A N + A VL PTRELA Q+ E
Sbjct: 38 GRDLMAAAQTGTGKTAGFALPLLQRLTMEGAKVASN-----SVRALVLVPTRELAEQVHE 92
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMD-HLTNTKGFSLGTLK 123
F G + LR + GGV + Q +AL K ++VATPGRL+D + N GFS L+
Sbjct: 93 SFRVYGQNLPLRTYAVYGGVSINPQMMALRKGIDVLVATPGRLLDLYRQNAVGFS--QLQ 150
Query: 124 YLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAA 183
LVLDEADR+L+ F LD++ +PR RQT LFSAT ++ ++++ R L++P+ +E +
Sbjct: 151 ALVLDEADRMLDLGFADELDQLFAALPRKRQTLLFSATFSEAIRQMARELLRDPLSVEVS 210
Query: 184 SKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQR 243
+ + T+KQ V K K +++L E +VF +T L L+ G
Sbjct: 211 PRNAAAKTVKQWLVPVDKKRKSELFLHLLAERRWGQVLVFVKTRKGVDQLVDELQAQGIA 270
Query: 244 AIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIH 303
+ I G Q+ RL AL +FKAGE +L+ TDVA+RGLDI + V+N+D+PT ++DY+H
Sbjct: 271 SDAIHGDKPQASRLRALERFKAGEVQVLVATDVAARGLDIHDLPQVVNFDLPTVAEDYVH 330
Query: 304 RVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
R+GRT RAG +G AISLV+ E++ IE LI + LP
Sbjct: 331 RIGRTGRAGASGEAISLVSADEVDQLAAIETLINQVLP 368
>gi|303317730|ref|XP_003068867.1| ATP-dependent RNA helicase DRS1, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108548|gb|EER26722.1| ATP-dependent RNA helicase DRS1, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 840
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 141/316 (44%), Positives = 192/316 (60%), Gaps = 6/316 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDL+G A TGSGKT AF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 356 GKDLVGGAVTGSGKTAAFIIPILERLLY---RPRKVPTSRVAILMPTRELAVQCYNVATK 412
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + LVGG + +Q L +RP +++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 413 LATYTDITFCQLVGGFSLREQENVLKQRPDVIIATPGRFIDHMRNSASFTVDTLEILVLD 472
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EILN IP+ RQT LFSATMT V KL R L PV++ SK T
Sbjct: 473 EADRMLEDGFADELNEILNTIPKSRQTMLFSATMTDSVDKLIRVGLNRPVRLMVDSKKHT 532
Query: 189 VDTLKQQY-RFVPAKY--KDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
V TL Q++ R P + + YLV + + + +VF R ++ LG +A
Sbjct: 533 VGTLVQEFVRLRPGREGKRMGYLVLLCNTIYTNRVIVFFRQKKEAHRARIIFGLLGLKAA 592
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ A+ F+ G+ L+ TD+ASRGLDI V+ VINY+ P + + Y+HRV
Sbjct: 593 ELHGSMSQEQRINAVEAFRDGKVPFLLATDLASRGLDIKGVESVINYEAPQSHEIYLHRV 652
Query: 306 GRTARAGRTGVAISLV 321
GRTARAGR+G A ++
Sbjct: 653 GRTARAGRSGRACTIA 668
>gi|320038882|gb|EFW20817.1| ATP-dependent RNA helicase DRS1 [Coccidioides posadasii str.
Silveira]
Length = 840
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 141/316 (44%), Positives = 192/316 (60%), Gaps = 6/316 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDL+G A TGSGKT AF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 356 GKDLVGGAVTGSGKTAAFIIPILERLLY---RPRKVPTSRVAILMPTRELAVQCYNVATK 412
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + LVGG + +Q L +RP +++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 413 LATYTDITFCQLVGGFSLREQENVLKQRPDVIIATPGRFIDHMRNSASFTVDTLEILVLD 472
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EILN IP+ RQT LFSATMT V KL R L PV++ SK T
Sbjct: 473 EADRMLEDGFADELNEILNTIPKSRQTMLFSATMTDSVDKLIRVGLNRPVRLMVDSKKHT 532
Query: 189 VDTLKQQY-RFVPAKY--KDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
V TL Q++ R P + + YLV + + + +VF R ++ LG +A
Sbjct: 533 VGTLVQEFVRLRPGREGKRMGYLVLLCNTIYTNRVIVFFRQKKEAHRARIIFGLLGLKAA 592
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ A+ F+ G+ L+ TD+ASRGLDI V+ VINY+ P + + Y+HRV
Sbjct: 593 ELHGSMSQEQRINAVEAFRDGKVPFLLATDLASRGLDIKGVESVINYEAPQSHEIYLHRV 652
Query: 306 GRTARAGRTGVAISLV 321
GRTARAGR+G A ++
Sbjct: 653 GRTARAGRSGRACTIA 668
>gi|429859431|gb|ELA34212.1| ATP-dependent RNA helicase drs1 [Colletotrichum gloeosporioides
Nara gc5]
Length = 772
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 133/318 (41%), Positives = 195/318 (61%), Gaps = 6/318 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKT AF +PIL+ LL + VP +L+PTRELAIQ
Sbjct: 286 GKDVVGGAVTGSGKTAAFVVPILERLLY---RPKKVPTSRVVILTPTRELAIQCHAVATK 342
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + ++ + VGG+ + QQ + L RP +++ATPGR +DH+ N+ F++ T++ LVLD
Sbjct: 343 LAAYTDIKFTLAVGGLSLKQQEVELRLRPDVIIATPGRFIDHMRNSASFNVDTVEILVLD 402
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EIL +P+ RQT LFSATMT V +L R + P ++ S+ T
Sbjct: 403 EADRMLEDGFADELNEILTTLPKSRQTMLFSATMTSSVDRLVRVGMNKPARVMVDSQKKT 462
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
V TL Q++ R P + + YL++I + ++F R ++ LG
Sbjct: 463 VGTLVQEFIRLRPGREEKRMGYLIHICKTMHTERVIIFFRQKKEAHRARIIFGMLGMSCA 522
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G M+Q++R+ ++ F+ G+ N L+ TD+ASRGLDI VD VINY+ P + Y+HRV
Sbjct: 523 ELHGSMNQAQRIASVENFRDGKVNYLLATDLASRGLDIKGVDTVINYEAPQKLEIYVHRV 582
Query: 306 GRTARAGRTGVAISLVNQ 323
GRTARAGR+GVA++L +
Sbjct: 583 GRTARAGRSGVAVTLAAE 600
>gi|451847073|gb|EMD60381.1| hypothetical protein COCSADRAFT_174666 [Cochliobolus sativus ND90Pr]
Length = 1123
Score = 256 bits (655), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 163/391 (41%), Positives = 228/391 (58%), Gaps = 44/391 (11%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD IG ++TG+GKT AF++PILQ E FA +++PTRELAIQI EQ +A
Sbjct: 730 GKDCIGGSRTGTGKTIAFSVPILQKWAEDPS------GIFAVIITPTRELAIQIYEQVKA 783
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKY 124
+ + S++ ++ GG D Q + L RPH+V+ATPGRL +H+ T G L +++
Sbjct: 784 ISAPQSMKPILITGGSDQRAQAIELASRPHVVIATPGRLAEHI-RTSGEDTICGLRRVRF 842
Query: 125 LVLDEADRLL---NDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKN 176
+V DEADRLL L+ L+V+P RQT LF+AT+T +V L+ RA +
Sbjct: 843 VVFDEADRLLAPGKGSMLPDLETCLSVLPPKETRQTLLFTATVTPEVLALKDQPRAPGRL 902
Query: 177 PVKIEAASKYSTVDT--------LKQQYRFVPAKYKDCYLVYIL-TEV-SASSTMVFTRT 226
P+ + S VDT L+Q+Y P +K+CYL +L T V S S ++F
Sbjct: 903 PIFV------SEVDTEDLAIPPRLQQRYLQTPVTHKECYLHVLLNTPVNSEKSVIIFCNR 956
Query: 227 CDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSV 286
LL MLR L R + + QS R+ L +F+A IL+ TDVA+RGLDIP V
Sbjct: 957 TKTATLLEYMLRLLDHRVTALHSGLKQSDRVNNLARFRAQAARILVATDVAARGLDIPEV 1016
Query: 287 DMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAE 346
+VIN+D+P + DYIHRVGRTARAGR G AI+L+ Q ++E IE +GKK+ EF E
Sbjct: 1017 ALVINFDVPRDPDDYIHRVGRTARAGRVGTAITLIGQRDVELVFAIEARVGKKMEEF--E 1074
Query: 347 EEEVLL-------LLERVTEAKRISQMTIKD 370
EE V + L+ VTE KR + ++I++
Sbjct: 1075 EEGVSIEGRVVRDALKPVTEKKREAMLSIEE 1105
>gi|69248308|ref|ZP_00604710.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
[Enterococcus faecium DO]
gi|257878842|ref|ZP_05658495.1| helicase [Enterococcus faecium 1,230,933]
gi|257881478|ref|ZP_05661131.1| helicase [Enterococcus faecium 1,231,502]
gi|257890700|ref|ZP_05670353.1| helicase [Enterococcus faecium 1,231,410]
gi|293560261|ref|ZP_06676758.1| cold-shock deAd box protein a [Enterococcus faecium E1162]
gi|294621795|ref|ZP_06700954.1| ATP-dependent RNA helicase [Enterococcus faecium U0317]
gi|314938932|ref|ZP_07846197.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133a04]
gi|314943517|ref|ZP_07850284.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133C]
gi|314948188|ref|ZP_07851582.1| DEAD/DEAH box helicase [Enterococcus faecium TX0082]
gi|314951548|ref|ZP_07854594.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133A]
gi|314991589|ref|ZP_07857065.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133B]
gi|314994922|ref|ZP_07860049.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133a01]
gi|383327538|ref|YP_005353422.1| DEAD/DEAH box helicase [Enterococcus faecium Aus0004]
gi|389867363|ref|YP_006374786.1| DEAD/DEAH box helicase [Enterococcus faecium DO]
gi|415892439|ref|ZP_11549927.1| cold-shock deAd box protein a [Enterococcus faecium E4453]
gi|416131873|ref|ZP_11597781.1| cold-shock deAd box protein a [Enterococcus faecium E4452]
gi|424795449|ref|ZP_18221304.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
S447]
gi|424819380|ref|ZP_18244487.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R501]
gi|424856321|ref|ZP_18280560.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R499]
gi|424949231|ref|ZP_18364921.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R496]
gi|424956289|ref|ZP_18371077.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R446]
gi|424967919|ref|ZP_18381589.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1140]
gi|424976047|ref|ZP_18389165.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1137]
gi|424981969|ref|ZP_18394659.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV99]
gi|424984734|ref|ZP_18397253.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV69]
gi|424987723|ref|ZP_18400084.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV38]
gi|424990961|ref|ZP_18403147.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV26]
gi|424995504|ref|ZP_18407380.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV168]
gi|424997413|ref|ZP_18409175.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV165]
gi|425000503|ref|ZP_18412062.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV161]
gi|425003235|ref|ZP_18414612.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV102]
gi|425006604|ref|ZP_18417774.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV1]
gi|425011167|ref|ZP_18422079.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
E422]
gi|425013771|ref|ZP_18424487.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
E417]
gi|425017560|ref|ZP_18428061.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C621]
gi|425022464|ref|ZP_18432645.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C497]
gi|425030171|ref|ZP_18435374.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C1904]
gi|425033448|ref|ZP_18438416.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 515]
gi|425034930|ref|ZP_18439786.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 514]
gi|425040930|ref|ZP_18445364.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 511]
gi|425044373|ref|ZP_18448536.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 510]
gi|425047569|ref|ZP_18451517.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 509]
gi|425053412|ref|ZP_18456957.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 506]
gi|430831942|ref|ZP_19449990.1| DEAD/DEAH box helicase [Enterococcus faecium E0333]
gi|430847435|ref|ZP_19465272.1| DEAD/DEAH box helicase [Enterococcus faecium E1133]
gi|430855628|ref|ZP_19473336.1| DEAD/DEAH box helicase [Enterococcus faecium E1392]
gi|431544298|ref|ZP_19518594.1| DEAD/DEAH box helicase [Enterococcus faecium E1731]
gi|431749300|ref|ZP_19538042.1| DEAD/DEAH box helicase [Enterococcus faecium E2297]
gi|431755816|ref|ZP_19544461.1| DEAD/DEAH box helicase [Enterococcus faecium E2883]
gi|431767952|ref|ZP_19556395.1| DEAD/DEAH box helicase [Enterococcus faecium E1321]
gi|431769544|ref|ZP_19557952.1| DEAD/DEAH box helicase [Enterococcus faecium E1644]
gi|431773402|ref|ZP_19561727.1| DEAD/DEAH box helicase [Enterococcus faecium E2369]
gi|431776500|ref|ZP_19564761.1| DEAD/DEAH box helicase [Enterococcus faecium E2560]
gi|431779582|ref|ZP_19567775.1| DEAD/DEAH box helicase [Enterococcus faecium E4389]
gi|431782613|ref|ZP_19570746.1| DEAD/DEAH box helicase [Enterococcus faecium E6012]
gi|431784440|ref|ZP_19572479.1| DEAD/DEAH box helicase [Enterococcus faecium E6045]
gi|68194452|gb|EAN08953.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
[Enterococcus faecium DO]
gi|257813070|gb|EEV41828.1| helicase [Enterococcus faecium 1,230,933]
gi|257817136|gb|EEV44464.1| helicase [Enterococcus faecium 1,231,502]
gi|257827060|gb|EEV53686.1| helicase [Enterococcus faecium 1,231,410]
gi|291598627|gb|EFF29685.1| ATP-dependent RNA helicase [Enterococcus faecium U0317]
gi|291605711|gb|EFF35148.1| cold-shock deAd box protein a [Enterococcus faecium E1162]
gi|313590904|gb|EFR69749.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133a01]
gi|313593873|gb|EFR72718.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133B]
gi|313596242|gb|EFR75087.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133A]
gi|313597889|gb|EFR76734.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133C]
gi|313641641|gb|EFS06221.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133a04]
gi|313645321|gb|EFS09901.1| DEAD/DEAH box helicase [Enterococcus faecium TX0082]
gi|364093335|gb|EHM35615.1| cold-shock deAd box protein a [Enterococcus faecium E4453]
gi|364093511|gb|EHM35776.1| cold-shock deAd box protein a [Enterococcus faecium E4452]
gi|378937232|gb|AFC62304.1| DEAD-box ATP dependent DNA helicase [Enterococcus faecium Aus0004]
gi|388532612|gb|AFK57804.1| DEAD box ATP-dependent RNA helicase SrmB [Enterococcus faecium DO]
gi|402924387|gb|EJX44599.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
S447]
gi|402926241|gb|EJX46293.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R501]
gi|402930201|gb|EJX49880.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R499]
gi|402934931|gb|EJX54225.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R496]
gi|402946393|gb|EJX64674.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R446]
gi|402952005|gb|EJX69866.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1137]
gi|402953338|gb|EJX71063.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1140]
gi|402962168|gb|EJX79137.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV99]
gi|402967955|gb|EJX84466.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV69]
gi|402973745|gb|EJX89845.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV38]
gi|402977156|gb|EJX92995.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV168]
gi|402978215|gb|EJX93973.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV26]
gi|402986313|gb|EJY01444.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV165]
gi|402988977|gb|EJY03941.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV161]
gi|402992431|gb|EJY07139.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV102]
gi|402996952|gb|EJY11308.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV1]
gi|402997720|gb|EJY12029.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
E422]
gi|403000335|gb|EJY14462.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
E417]
gi|403002697|gb|EJY16644.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C497]
gi|403004081|gb|EJY17911.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C621]
gi|403004113|gb|EJY17941.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C1904]
gi|403009946|gb|EJY23359.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 515]
gi|403018997|gb|EJY31633.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 514]
gi|403027273|gb|EJY39167.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 511]
gi|403029941|gb|EJY41662.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 510]
gi|403030418|gb|EJY42102.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 506]
gi|403033364|gb|EJY44870.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 509]
gi|430480583|gb|ELA57757.1| DEAD/DEAH box helicase [Enterococcus faecium E0333]
gi|430537055|gb|ELA77408.1| DEAD/DEAH box helicase [Enterococcus faecium E1133]
gi|430546683|gb|ELA86626.1| DEAD/DEAH box helicase [Enterococcus faecium E1392]
gi|430592410|gb|ELB30425.1| DEAD/DEAH box helicase [Enterococcus faecium E1731]
gi|430611728|gb|ELB48804.1| DEAD/DEAH box helicase [Enterococcus faecium E2297]
gi|430616431|gb|ELB53345.1| DEAD/DEAH box helicase [Enterococcus faecium E2883]
gi|430630040|gb|ELB66417.1| DEAD/DEAH box helicase [Enterococcus faecium E1321]
gi|430636649|gb|ELB72713.1| DEAD/DEAH box helicase [Enterococcus faecium E2369]
gi|430636858|gb|ELB72912.1| DEAD/DEAH box helicase [Enterococcus faecium E1644]
gi|430640819|gb|ELB76647.1| DEAD/DEAH box helicase [Enterococcus faecium E2560]
gi|430641683|gb|ELB77478.1| DEAD/DEAH box helicase [Enterococcus faecium E4389]
gi|430647250|gb|ELB82698.1| DEAD/DEAH box helicase [Enterococcus faecium E6012]
gi|430649535|gb|ELB84911.1| DEAD/DEAH box helicase [Enterococcus faecium E6045]
Length = 503
Score = 256 bits (655), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 147/345 (42%), Positives = 208/345 (60%), Gaps = 13/345 (3%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKD+IG AQTG+GKT AF LP+L+ +I ++ + V++PTRELAIQ E+
Sbjct: 37 AGKDVIGQAQTGTGKTAAFGLPMLE---KIDPDRHELQGL---VIAPTRELAIQTQEELY 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
LG +R + GG D+ +Q L RPHIVV TPGR++DH+ N LGT++ LVL
Sbjct: 91 RLGRDKKVRVQAVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHI-NRHTLKLGTVQTLVL 149
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEAD +LN F + +++I++ +P RQT LFSATM +K + +KNP ++ +K
Sbjct: 150 DEADEMLNMGFLEDIEKIISQVPDQRQTLLFSATMPPAIKNIGVKFMKNPHHVKIKAKEM 209
Query: 188 TVDTLKQQYRFVPAK-YKDCYLVYILTEVSASS-TMVFTRTCDATRLLALMLRNLGQRAI 245
T D + Q Y V AK Y+ ++ L +V T+VF RT LA L G RA
Sbjct: 210 TADLIDQYY--VRAKEYEKFDIMTRLFDVQTPELTIVFGRTKRRVDELARGLEARGYRAE 267
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G +SQ KR+ L FK+G +IL+ TDVA+RGLDI V V NYDIP + + Y+HR+
Sbjct: 268 GIHGDLSQQKRMSVLRSFKSGHLDILVATDVAARGLDISGVTHVYNYDIPQDPESYVHRI 327
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEF--PAEEE 348
GRT RAG+ G++++ V E+++ IE L K++ P E+E
Sbjct: 328 GRTGRAGKGGMSVTFVTPNEMDYLHVIENLTKKRMTTLRPPTEKE 372
>gi|257885750|ref|ZP_05665403.1| helicase [Enterococcus faecium 1,231,501]
gi|257821606|gb|EEV48736.1| helicase [Enterococcus faecium 1,231,501]
Length = 503
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/345 (42%), Positives = 208/345 (60%), Gaps = 13/345 (3%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKD+IG AQTG+GKT AF LP+L+ +I ++ + V++PTRELAIQ E+
Sbjct: 37 AGKDVIGQAQTGTGKTAAFGLPMLE---KIDPDRHELQGL---VIAPTRELAIQTQEELY 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
LG +R + GG D+ +Q L RPHIVV TPGR++DH+ N LGT++ LVL
Sbjct: 91 RLGRDKKVRVQAVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHI-NRHTLKLGTVQTLVL 149
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEAD +LN F + +++I++ +P RQT LFSATM +K + +KNP ++ +K
Sbjct: 150 DEADEMLNMGFLEDIEKIISQVPDQRQTLLFSATMPPAIKNIGVKFMKNPHHVKIKAKEV 209
Query: 188 TVDTLKQQYRFVPAK-YKDCYLVYILTEVSASS-TMVFTRTCDATRLLALMLRNLGQRAI 245
T D + Q Y V AK Y+ ++ L +V T+VF RT LA L G RA
Sbjct: 210 TADLIDQYY--VRAKEYEKFDIMTRLFDVQTPELTIVFGRTKRRVDELARGLEARGYRAE 267
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G +SQ KR+ L FK+G +IL+ TDVA+RGLDI V V NYDIP + + Y+HR+
Sbjct: 268 GIHGDLSQQKRMSVLRSFKSGHLDILVATDVAARGLDISGVTHVYNYDIPQDPESYVHRI 327
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEF--PAEEE 348
GRT RAG+ G++++ V E+++ IE L K++ P E+E
Sbjct: 328 GRTGRAGKGGMSVTFVTPNEMDYLHVIENLTKKRMTTLRPPTEKE 372
>gi|257093622|ref|YP_003167263.1| DEAD/DEAH box helicase domain-containing protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257046146|gb|ACV35334.1| DEAD/DEAH box helicase domain protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 491
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/332 (43%), Positives = 205/332 (61%), Gaps = 5/332 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFAC---VLSPTRELAIQISE 64
AG+DL+G AQTG+GKT AF LP+LQ +L A + PA +L+PTRELAIQ+ E
Sbjct: 37 AGQDLMGGAQTGTGKTAAFTLPLLQRILPFASASLS-PARHPVRVLMLAPTRELAIQVHE 95
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
+ LR A + GGVD+ Q + ++VATPGRL+D L + + G+++
Sbjct: 96 SVRGYSKYVPLRSACVYGGVDIKPQIAEIRLGVEVLVATPGRLLD-LIEQRCLNFGSVQA 154
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F + I+N++P+ RQ+ LFSAT ++++KKL LK+PV IE A
Sbjct: 155 LVLDEADRMLDMGFIPDVTRIINLLPQQRQSLLFSATFSEEIKKLADRMLKSPVLIEVAR 214
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
+ + +T+ + V A+ K LV +L + +VFTRT T LA L+ G A
Sbjct: 215 RNTVSETITHRVHPVAAEAKRALLVKLLRSSDFNQVLVFTRTKIETNKLARELQRAGIAA 274
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQ +RL AL FK G +L+ TDVA+RGLDI + VIN+++P +DYIHR
Sbjct: 275 DSIHGDKSQQERLKALEAFKDGSVLVLVATDVAARGLDIDELPHVINFELPRTPEDYIHR 334
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLI 336
+GRT RAG+ G A+SLV+ E+ + + IEKLI
Sbjct: 335 IGRTGRAGKPGTAVSLVSASEVPYLVDIEKLI 366
>gi|167585895|ref|ZP_02378283.1| DEAD/DEAH box helicase domain protein [Burkholderia ubonensis Bu]
Length = 487
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 151/336 (44%), Positives = 201/336 (59%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT +F+LPILQ LL A N PA A +L+PTRELA Q++
Sbjct: 47 AGRDVMGAAQTGTGKTASFSLPILQRLLPQA-NTSASPARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A G LR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVHAYGKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQM 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
ST + Q V K +V +L +VF + LA L G A
Sbjct: 225 SNSTNANVTQIVYDVAEGDKQAAVVQLLRSRGLKQVIVFCNSKIGASRLARNLERDGVVA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G +Q +R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 SAIHGDKTQIERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG TG A+SL + E + IEKLI + L
Sbjct: 345 IGRTGRAGATGDALSLCSPNERKQLADIEKLIKRPL 380
>gi|81429227|ref|YP_396228.1| ATP-dependent RNA helicase [Lactobacillus sakei subsp. sakei 23K]
gi|78610870|emb|CAI55922.1| Putative ATP-dependent RNA helicase [Lactobacillus sakei subsp.
sakei 23K]
Length = 530
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/349 (42%), Positives = 201/349 (57%), Gaps = 16/349 (4%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKD+IG AQTG+GKT AF LPILQ L P A ++SPTRELAIQ E+
Sbjct: 37 AGKDVIGQAQTGTGKTAAFGLPILQNL------DLDNPDIQALIISPTRELAIQTQEELY 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
LG + V+ GG D+ +Q +L P I+V TPGRL+DH+ N + L +K LVL
Sbjct: 91 RLGRDRKAKVQVVYGGADIRRQIRSLKDHPQILVGTPGRLLDHI-NRRTVKLDHVKTLVL 149
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEAD +L+ F ++ I+ +P RQT LFSAT+ + K+ ++ + NP I+ SK
Sbjct: 150 DEADEMLDMGFVDDIESIIKQVPEKRQTLLFSATLPAPIMKIGKSFMTNPEMIKVKSKEL 209
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEV----SASSTMVFTRTCDATRLLALMLRNLGQR 243
T D + Q Y + KD I+T + S T++F RT L L+ G
Sbjct: 210 TADLIDQYY----VRAKDFEKFDIMTRLFDVQSPELTLIFGRTKRRVDELTRGLKARGYN 265
Query: 244 AIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIH 303
A I G +SQ KR+ L FKAG ++L+ TDVA+RGLDI V V NYDIP + Y+H
Sbjct: 266 AEGIHGDLSQQKRMSVLKSFKAGRLDVLVATDVAARGLDISGVTHVYNYDIPQDPDSYVH 325
Query: 304 RVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKK-LPEFPAEEEEVL 351
R+GRT RAG++GV+++ V E+E+ IE+L K+ LP P E+E
Sbjct: 326 RIGRTGRAGKSGVSVTFVTPNEMEYLRIIEELTKKRMLPLQPPSEKEAF 374
>gi|121608317|ref|YP_996124.1| DEAD/DEAH box helicase domain-containing protein [Verminephrobacter
eiseniae EF01-2]
gi|121552957|gb|ABM57106.1| DEAD/DEAH box helicase domain protein [Verminephrobacter eiseniae
EF01-2]
Length = 486
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/334 (42%), Positives = 201/334 (60%), Gaps = 5/334 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF+LP+LQ LL E+ PA A VL PTRELA Q++ Q
Sbjct: 40 GQDVMGAAQTGTGKTAAFSLPLLQRLLR-HESSSASPARHPVRALVLLPTRELADQVARQ 98
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
LR V+ GG+DM QTL L K ++VATPGRL+DH+ K L ++Y+
Sbjct: 99 IALYARHTKLRSTVVFGGIDMKPQTLELKKGVEVLVATPGRLLDHI-EAKNAVLNQVEYV 157
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +P+ R T LFSAT + ++++L + L PV IE A
Sbjct: 158 VLDEADRMLDIGFLPDLQRILSYLPKERTTLLFSATFSPEIRRLASSYLHQPVTIEVARP 217
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T T++Q++ K + +L +F + LA L G R
Sbjct: 218 NATAATVEQRFYSANDDDKRRAIHQVLRTRGLKQAFIFVNSKLGCARLARSLEREGLRTA 277
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL AL FK+G+ ++L+CTDVA+RGLDI V V N+D+P N++DY+HR+
Sbjct: 278 ALHGDRSQDERLKALQAFKSGDVDLLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRI 337
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKK 339
GRT RAG +G+A++LV+ + IEKLIGKK
Sbjct: 338 GRTGRAGASGLAVTLVSGSDARLVADIEKLIGKK 371
>gi|325091017|gb|EGC44327.1| ATP-dependent RNA helicase drs1 [Ajellomyces capsulatus H88]
Length = 828
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/318 (43%), Positives = 194/318 (61%), Gaps = 6/318 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKTGAF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 341 GKDVVGGAVTGSGKTGAFIIPILERLLY---RPRKVPTSRVVILMPTRELAVQCYNVATK 397
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + LVGG + +Q L KRP +++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 398 LATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLD 457
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EIL IP+ RQT LFSATMT V KL R L PV++ +K T
Sbjct: 458 EADRMLEDGFADELNEILTTIPKSRQTMLFSATMTNNVDKLIRVGLNRPVRLMVDAKKQT 517
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
V TL Q++ R P + + YL+ + + +VF R+ + ++ LG +
Sbjct: 518 VGTLIQEFVRLRPGREEKRLGYLIVLCKNIYKDRVIVFFRSKKEAHRVRIIFGLLGLKVT 577
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ ++ F+ G+ + L+ TDVASRGLDI V+ VINY+ P + + Y+HRV
Sbjct: 578 ELHGSMSQEQRIKSVESFRDGKVSFLLATDVASRGLDIKGVETVINYEAPQSHEIYLHRV 637
Query: 306 GRTARAGRTGVAISLVNQ 323
GRTARAGR+G A +L +
Sbjct: 638 GRTARAGRSGRACTLAAE 655
>gi|149179168|ref|ZP_01857736.1| ATP-dependent RNA helicase [Planctomyces maris DSM 8797]
gi|148841986|gb|EDL56381.1| ATP-dependent RNA helicase [Planctomyces maris DSM 8797]
Length = 445
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 140/335 (41%), Positives = 199/335 (59%), Gaps = 6/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQR-TVPAF-FACVLSPTRELAIQISEQF 66
G+D++G AQTG+GKT A ALPIL ++ +N R ++P A VL+PTRELAIQI + F
Sbjct: 39 GRDVLGCAQTGTGKTAALALPILN---QLGKNSRKSIPHHPLALVLAPTRELAIQIGDSF 95
Query: 67 EALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLV 126
+A G + LR ++ GGV Q AL + HI+VATPGRL+D L N L L+ V
Sbjct: 96 DAYGRHLKLRSVLIYGGVGQGNQVKALKRGAHILVATPGRLLD-LMNQGHIKLNQLEVFV 154
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
LDEADR+L+ F L I+ +P RQ+ FSAT+ K+ +L + L PV + K
Sbjct: 155 LDEADRMLDMGFLPDLKRIITQLPTQRQSLFFSATLAPKITELAHSLLSKPVTVNVTPKT 214
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
++V+ ++QQ FV +K L IL +VFT+T L+ L G +A
Sbjct: 215 TSVEKIQQQLMFVERNFKQPLLQKILGGDEVERALVFTKTKRTANTLSQRLVRSGFKATA 274
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
I G+ SQ R AL F+ + +L+ TDVA+RG+DI + VIN+D+P + Y+HR+G
Sbjct: 275 IHGNKSQGARQQALEAFRRKQVQVLVATDVAARGIDIDGITHVINFDLPVEPEAYVHRIG 334
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
RT RAG G+AIS ++ E + IE+LIG+K+P
Sbjct: 335 RTGRAGANGIAISFCSESERKELRSIERLIGQKVP 369
>gi|390570352|ref|ZP_10250619.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia
terrae BS001]
gi|389937684|gb|EIM99545.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia
terrae BS001]
Length = 486
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 203/335 (60%), Gaps = 5/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT F+LPI+Q LL +A + PA A +L+PTRELA Q++
Sbjct: 48 GRDVMGAAQTGTGKTAGFSLPIIQRLLPLASTSAS-PARHPVRALILTPTRELADQVAAN 106
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+A SLR AV+ GGVDM Q+ L + I++ATPGRL+DH+ K +LG ++ L
Sbjct: 107 VQAYAKHTSLRSAVVFGGVDMNPQSAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQIL 165
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L ILN++P RQT LFSAT + ++KKL L+NP IE A
Sbjct: 166 VLDEADRMLDMGFLPDLQRILNLLPAERQTLLFSATFSPEIKKLASTYLRNPQTIEVARS 225
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
ST + Q V K +V ++ + +VF + LA L G A
Sbjct: 226 NSTATNVTQIVYEVAEGDKTGAVVKLIRDRGLKQVIVFCNSKIGASRLARQLERDGVVAT 285
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G +QS+R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR+
Sbjct: 286 AIHGDRTQSERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRI 345
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
GRT RAG +G A+SL + E + IEKLI + L
Sbjct: 346 GRTGRAGASGDALSLFSPNERKQLADIEKLIKRPL 380
>gi|67517117|ref|XP_658442.1| hypothetical protein AN0838.2 [Aspergillus nidulans FGSC A4]
gi|40746512|gb|EAA65668.1| hypothetical protein AN0838.2 [Aspergillus nidulans FGSC A4]
Length = 1676
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/318 (43%), Positives = 193/318 (60%), Gaps = 6/318 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKT AF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 827 GKDIVGSAVTGSGKTAAFVVPILERLLF---RPRKVPTSRVAILMPTRELAVQCYNVATK 883
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + LVGG + +Q L KRP +++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 884 LATYTDITFCQLVGGFSLREQENVLKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLD 943
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EIL IP+ RQT LFSATMT V KL R L PV++ +K +T
Sbjct: 944 EADRMLEDGFADELNEILTTIPKSRQTMLFSATMTDSVDKLIRVGLNRPVRLMVDTKKNT 1003
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
TL Q++ R P + YL+++ EV +VF R + ++ LG +A
Sbjct: 1004 AVTLVQEFVRLRPGREDKRLGYLLHLCKEVYTGRVIVFFRQKKEAHRVRIVFGLLGLKAA 1063
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ ++ F+ G N L+ TD+ASRGLDI V+ VINY+ P + + Y+HRV
Sbjct: 1064 ELHGSMSQEQRIKSVESFRDGNVNFLLATDLASRGLDIKGVETVINYEAPQSHEIYVHRV 1123
Query: 306 GRTARAGRTGVAISLVNQ 323
GRTARAGR+G A ++ +
Sbjct: 1124 GRTARAGRSGRACTIAAE 1141
>gi|167580312|ref|ZP_02373186.1| ATP-dependent RNA helicase RhlE [Burkholderia thailandensis TXDOH]
gi|167618435|ref|ZP_02387066.1| ATP-dependent RNA helicase RhlE [Burkholderia thailandensis Bt4]
gi|257139776|ref|ZP_05588038.1| ATP-dependent RNA helicase RhlE [Burkholderia thailandensis E264]
Length = 481
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 203/336 (60%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
+G+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 47 SGRDVMGAAQTGTGKTASFSLPIIQRLLPQA-NTSASPARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A LR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
+ T+ Q V K +V ++ + S +VF + LA + G A
Sbjct: 225 SNAAASTVTQIVYDVAEGDKQAAVVKLIRDRSLKQVIVFCNSKIGASRLARQIERDGIVA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQS+R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 AAIHGDRSQSERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG +G A+SL + E + IEKLI + L
Sbjct: 345 IGRTGRAGASGDALSLCSPNERKQLADIEKLIKRTL 380
>gi|162447374|ref|YP_001620506.1| ATP-dependent RNA helicase, DEAD box containing [Acholeplasma
laidlawii PG-8A]
gi|161985481|gb|ABX81130.1| ATP-dependent RNA helicase, superfamily II [Acholeplasma laidlawii
PG-8A]
Length = 448
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/335 (42%), Positives = 207/335 (61%), Gaps = 6/335 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQ--RTVPAFFACVLSPTRELAIQISEQ 65
+G+DL+G AQTG+GKT AFA+PILQ + E E++ R V A +L+PTRELA+QI E
Sbjct: 37 SGQDLLGSAQTGTGKTAAFAIPILQKIYETKEHKAPRKVQAL---ILTPTRELALQIHEN 93
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+ +++ + GGV +Q AL + +V+ATPGRL+D L N K SL ++YL
Sbjct: 94 VKIYAKYLNIISTTIYGGVSQKRQEEALKRGVDVVIATPGRLLD-LMNQKIISLQDVRYL 152
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEAD++L+ F K + I++ P+ RQT LFSATM K+++ L + L NP +I
Sbjct: 153 VLDEADQMLDMGFIKDVTSIVDKTPKKRQTMLFSATMPKQIEVLSKQILVNPERIAVTPV 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
T+D + Q V K L+ ++ ++ S +VFT+T L L NLG +
Sbjct: 213 TQTLDAITQSVYMVNKANKTLLLIDLIYTLNMKSVLVFTKTKHGANKLVKNLMNLGIESE 272
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
PI G SQ+ R AL FK G+ IL+ TD+A+RG+DI ++D VIN+++P + YIHR+
Sbjct: 273 PIHGSKSQAARERALANFKKGKTKILVATDIAARGIDIEALDYVINFELPEVPETYIHRI 332
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
GRT RAG +G+A+SLV+ E + Q+EK I K+
Sbjct: 333 GRTGRAGLSGMALSLVDPSEQKLLTQVEKHINSKI 367
>gi|29347295|ref|NP_810798.1| ATP-dependent RNA helicase [Bacteroides thetaiotaomicron VPI-5482]
gi|29339194|gb|AAO76992.1| putative ATP-dependent RNA helicase [Bacteroides thetaiotaomicron
VPI-5482]
Length = 374
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/334 (43%), Positives = 202/334 (60%), Gaps = 4/334 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQAL-LEIAENQRTVPAFFACVLSPTRELAIQISEQF 66
A KD++G AQTG+GKT +FA+PI+Q L L E +R+ A +L+PTRELA+QISE
Sbjct: 37 AKKDILGCAQTGTGKTASFAIPIIQHLHLNKGEGKRS--EIKALILTPTRELALQISECI 94
Query: 67 EALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLV 126
E +R V+ GGV+ Q L K I+VATPGRL+D L N L ++Y V
Sbjct: 95 EDYSKYTRIRHGVIFGGVNQRPQVDMLHKGIDILVATPGRLLD-LMNQGHIRLDNIQYFV 153
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
LDEADR+L+ F + IL +P+ +QT FSATM + L + LKNPVKI K
Sbjct: 154 LDEADRMLDMGFIHDIKRILPKLPKEKQTLFFSATMPDTIIALTNSLLKNPVKIYVTPKS 213
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
STVD++KQ FV K K L+ IL + S ++F+RT + +L G +
Sbjct: 214 STVDSIKQLVYFVEKKEKSLLLISILQKSEDRSVLIFSRTKHNADKIVKILGKAGIGSQA 273
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
I G+ SQ+ R AL FK+G+ +++ TD+ASRG+DI + +VINYD+P + Y+HR+G
Sbjct: 274 IHGNKSQAARQSALGNFKSGKTRVMVATDIASRGIDINELPLVINYDLPDVPETYVHRIG 333
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
RT RAG G+A++ +Q E + I+KL GKKL
Sbjct: 334 RTGRAGNAGMALTFCSQEERKQINDIQKLTGKKL 367
>gi|167823349|ref|ZP_02454820.1| putative ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 9]
gi|226195327|ref|ZP_03790916.1| DEAD/DEAH box helicase [Burkholderia pseudomallei Pakistan 9]
gi|225932529|gb|EEH28527.1| DEAD/DEAH box helicase [Burkholderia pseudomallei Pakistan 9]
Length = 478
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 203/336 (60%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
+G+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 47 SGRDVMGAAQTGTGKTASFSLPIIQRLLPQA-NTSASPARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A LR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
+ T+ Q V K +V ++ + S +VF + LA + G A
Sbjct: 225 SNAAASTVTQIVYDVAEGDKQAAVVKLIRDRSLKQVIVFCNSKIGASRLARQIERDGIIA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQS+R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 AAIHGDRSQSERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG +G A+SL + E + IEKLI + L
Sbjct: 345 IGRTGRAGASGDALSLCSPNERKQLADIEKLIKRTL 380
>gi|380487114|emb|CCF38253.1| DEAD/DEAH box helicase [Colletotrichum higginsianum]
Length = 777
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/319 (43%), Positives = 194/319 (60%), Gaps = 7/319 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKT AF +PIL+ LL + VP +L+PTRELAIQ
Sbjct: 289 GKDVVGGAVTGSGKTAAFVVPILERLLY---RPKKVPTSRVVILTPTRELAIQCHAVATK 345
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + ++ + VGG+ + Q + L RP +++ATPGR +DH+ N+ F++ T++ LVLD
Sbjct: 346 LAAYTDIKFTLAVGGLSLKAQEVELRLRPDVIIATPGRFIDHMRNSASFNVDTVEILVLD 405
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADR+L D F L+EIL +P+ RQT LFSATMT V KL R + P ++ S K
Sbjct: 406 EADRMLEDGFADELNEILTTLPKSRQTMLFSATMTSSVDKLVRVGMNKPARVMVDSQKNK 465
Query: 188 TVDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
TV TL Q++ R P + YLV+I + +VF R ++ LG
Sbjct: 466 TVGTLVQEFVRLRPGREDKRMGYLVHICKTMHTERVIVFFRQKKEAHRARIIFGLLGMSC 525
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
+ G M+Q++R+ ++ F+ G+ N L+ TD+ASRGLDI VD VINY+ P N + Y+HR
Sbjct: 526 AELHGSMNQAQRIASVENFRDGKVNYLLATDLASRGLDIKGVDTVINYEAPQNIEIYVHR 585
Query: 305 VGRTARAGRTGVAISLVNQ 323
VGRTARAGRTG+AI+L +
Sbjct: 586 VGRTARAGRTGIAITLAAE 604
>gi|254259821|ref|ZP_04950875.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 1710a]
gi|254218510|gb|EET07894.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 1710a]
Length = 486
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 203/336 (60%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
+G+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 47 SGRDVMGAAQTGTGKTASFSLPIIQRLLPQA-NTSASPARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A LR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
+ T+ Q V K +V ++ + S +VF + LA + G A
Sbjct: 225 SNAAASTVTQIVYDVAEGDKQAAVVKLIRDRSLKQVIVFCNSKIGASRLARQIERDGIIA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQS+R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 AAIHGDRSQSERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG +G A+SL + E + IEKLI + L
Sbjct: 345 IGRTGRAGASGDALSLCSPNERKQLADIEKLIKRTL 380
>gi|383455776|ref|YP_005369765.1| putative ATP-dependent RNA helicase RhlE [Corallococcus coralloides
DSM 2259]
gi|380732540|gb|AFE08542.1| putative ATP-dependent RNA helicase RhlE [Corallococcus coralloides
DSM 2259]
Length = 484
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/336 (43%), Positives = 202/336 (60%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKD++G+AQTG+GKT AFALPILQ L A P VL+PTRELA Q+S+ F
Sbjct: 37 AGKDVLGVAQTGTGKTAAFALPILQRLSAKAPAGGARP-VRCLVLTPTRELASQVSDSFA 95
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGF-SLGTLKYLV 126
G + LR AV+ GGV Q AL + I+VATPGRL+D + +GF +L L+ V
Sbjct: 96 TYGKNLPLRHAVVFGGVGQNPQVQALRQGVDILVATPGRLLDLID--QGFVTLRALEVFV 153
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
LDEADR+L+ F + ++ V+P +RQT FSAT+ + L R LK PV++E +
Sbjct: 154 LDEADRMLDMGFIHDVRRVIKVLPPVRQTLFFSATLPPDIMDLARNILKEPVRVEVSPAS 213
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSA-SSTMVFTRTCDATRLLALMLRNLGQRAI 245
ST DT+ QQ FV + K L ++L + A +VFTRT +A L G RA
Sbjct: 214 STADTVSQQVYFVEREEKRALLTHLLQDAKAIPRALVFTRTKHGANRVAKQLTAAGVRAD 273
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G+ SQ+ R AL++F+AG +L+ TD+A+RG+DI + V NYD+P + Y+HR+
Sbjct: 274 AIHGNKSQNARERALDEFRAGTLRVLVATDIAARGIDIDGLSHVFNYDLPNVPEQYVHRI 333
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
GRT RAG +G A+S + E + IE+ I + +P
Sbjct: 334 GRTGRAGASGQAVSFCDSEERAYLRDIERTIRRSVP 369
>gi|367014751|ref|XP_003681875.1| hypothetical protein TDEL_0E04210 [Torulaspora delbrueckii]
gi|359749536|emb|CCE92664.1| hypothetical protein TDEL_0E04210 [Torulaspora delbrueckii]
Length = 740
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/327 (43%), Positives = 205/327 (62%), Gaps = 21/327 (6%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFAC----VLSPTRELAIQISE 64
GKD+I A TGSGKT AF +PI++ LL PA A VL+PTRELAIQ+S+
Sbjct: 256 GKDIIAGAVTGSGKTAAFMIPIIERLL-------YKPAKIASTRVIVLTPTRELAIQVSD 308
Query: 65 QFEALGSGIS-LRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK 123
+ LG +S L + VGG+++ QQ +L RP IVVATPGR +DH+ N+ F++ +++
Sbjct: 309 VAKKLGKYVSGLTFGLAVGGLNLRQQEQSLKARPDIVVATPGRFIDHIRNSASFNVDSVE 368
Query: 124 YLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAA 183
LV+DEADR+L + F++ L+EIL+++P RQT LFSATM K+K+L LK PV++
Sbjct: 369 VLVIDEADRMLEEGFQEELNEILSLLPSKRQTLLFSATMNSKIKQLVSLTLKRPVRVMID 428
Query: 184 SKYSTVDTLKQQYRFVPAKYKDC-------YLVYILTEVSASSTMVFTRTCDATRLLALM 236
L Q+ FV + +D +L+ L +VF + L ++
Sbjct: 429 PPKQAASKLTQE--FVRIRKRDHLKPSVLFHLIKKLDGTGQKRMVVFVARKEMAHRLRII 486
Query: 237 LRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPT 296
L LG + G +SQ +RL ++N+FK+ E IL+CTD+ASRGLDIP +++VINYD+P
Sbjct: 487 LGLLGISVGELHGSLSQEQRLQSVNQFKSLEVPILVCTDLASRGLDIPKIEVVINYDMPK 546
Query: 297 NSKDYIHRVGRTARAGRTGVAISLVNQ 323
N + Y+HRVGRTARAGR G ++SLV +
Sbjct: 547 NYEVYLHRVGRTARAGREGRSVSLVGE 573
>gi|407712738|ref|YP_006833303.1| DEAD/DEAH box helicase [Burkholderia phenoliruptrix BR3459a]
gi|407234922|gb|AFT85121.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia
phenoliruptrix BR3459a]
Length = 512
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 206/336 (61%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT +F+LPI+Q LL A + PA A +L+PTRELA Q++
Sbjct: 73 AGRDVMGAAQTGTGKTASFSLPIIQRLLPHASTSAS-PARHPVRALILTPTRELADQVAA 131
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
++ +LR AV+ GGVDM Q+ L + I++ATPGRL+DH+ K +LG ++
Sbjct: 132 NVQSYAKHTALRSAVVFGGVDMNPQSDQLRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 190
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 191 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSGEIKKLAATYLRNPQTIEVAR 250
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
ST + Q V K +V ++ E + +VF + LA L G A
Sbjct: 251 SNSTATNVTQIVYEVAEGDKTGAVVQLIRERNLKQVIVFCNSKIGASRLARSLERDGVVA 310
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQ++R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 311 TAIHGDRSQNERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 370
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG +G A+SL + E + IEKLI + L
Sbjct: 371 IGRTGRAGASGDALSLFSPNEKKQLADIEKLIKRPL 406
>gi|167844897|ref|ZP_02470405.1| putative ATP-dependent RNA helicase 2 [Burkholderia pseudomallei
B7210]
Length = 399
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 203/336 (60%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
+G+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 47 SGRDVMGAAQTGTGKTASFSLPIIQRLLPQA-NTSASPARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A LR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
+ T+ Q V K +V ++ + S +VF + LA + G A
Sbjct: 225 SNAAASTVTQIVYDVAEGDKQAAVVKLIRDRSLKQVIVFCNSKIGASRLARQIERDGIIA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQS+R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 AAIHGDRSQSERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG +G A+SL + E + IEKLI + L
Sbjct: 345 IGRTGRAGASGDALSLCSPNERKQLADIEKLIKRTL 380
>gi|367004050|ref|XP_003686758.1| hypothetical protein TPHA_0H01160 [Tetrapisispora phaffii CBS 4417]
gi|357525060|emb|CCE64324.1| hypothetical protein TPHA_0H01160 [Tetrapisispora phaffii CBS 4417]
Length = 433
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 160/385 (41%), Positives = 221/385 (57%), Gaps = 23/385 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT AFA P+L E F +L+PTRELA+QI+EQF A
Sbjct: 41 GRDCIGGAKTGSGKTVAFAAPMLTKWSEDPS------GMFGVILTPTRELAMQIAEQFTA 94
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYL 125
LG+ +++R ++VGG +++Q L L K+PH ++ATPGRL H+ + ++G L K+L
Sbjct: 95 LGASMNIRICLVVGGESIVKQALELQKKPHFIIATPGRLAHHIMASGEDTVGGLIRTKFL 154
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRM--RQTYLFSATMTKKVKKLQRAC---LKNPVKI 180
VLDEAD LL F K L + +P RQT LF+AT+T +V+ LQ A K P+
Sbjct: 155 VLDEADILLTSTFSKDLAVCIQKLPAKDKRQTLLFTATITDQVRALQNAPTQEYKPPLYC 214
Query: 181 EAASKYSTV---DTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLAL 235
TV TLK +Y VP K+ YL +LT SS +VF +L
Sbjct: 215 YEVGTVDTVAIPSTLKVEYLLVPDYVKEAYLYQLLTCETYKDSSAIVFVNRTATAEVLRR 274
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
LR L R + + Q +R +L +F+A +LI TDVA+RGLDIP V++VINYDIP
Sbjct: 275 TLRELEIRVTSLHSQLPQQERTNSLQRFRANAARVLIATDVAARGLDIPIVELVINYDIP 334
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLL--L 353
+ +IHR GRTARAGR G AIS V ++ IE+ I KK+ + + ++
Sbjct: 335 QDPDTFIHRSGRTARAGRKGDAISFVTPRDITRIQSIEERINKKMEKCDKVHDTAVIRKA 394
Query: 354 LERVTEAKRISQMTI--KDSGNKRR 376
L +VT+AKR S M + ++ G KRR
Sbjct: 395 LTKVTKAKRESLMAMEKENFGEKRR 419
>gi|350638693|gb|EHA27049.1| hypothetical protein ASPNIDRAFT_130294 [Aspergillus niger ATCC
1015]
Length = 793
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 138/318 (43%), Positives = 193/318 (60%), Gaps = 6/318 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKT AF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 319 GKDIVGSAVTGSGKTAAFVVPILERLLF---RPRKVPTSRVAILMPTRELAVQCYNVATK 375
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + LVGG + +Q L KRP +++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 376 LATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLD 435
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EIL IP+ RQT LFSATMT V KL R L PV++ +K +T
Sbjct: 436 EADRMLEDGFADELNEILTTIPKSRQTMLFSATMTDTVDKLIRVGLNRPVRLMVDAKKNT 495
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
TL Q++ R P + YL+Y+ E+ +VF R + ++ LG +A
Sbjct: 496 AVTLVQEFVRLRPGREDKRLGYLLYLCKEIYTGRVIVFFRQKKEAHRVRIIFGLLGLKAA 555
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ ++ F+ G+ L+ TD+ASRGLDI V+ VINY+ P + + Y+HRV
Sbjct: 556 ELHGSMSQEQRIKSVENFREGKAAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRV 615
Query: 306 GRTARAGRTGVAISLVNQ 323
GRTARAGR+G A ++ +
Sbjct: 616 GRTARAGRSGRACTIAAE 633
>gi|167910130|ref|ZP_02497221.1| putative ATP-dependent RNA helicase 2 [Burkholderia pseudomallei
112]
Length = 400
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 203/336 (60%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
+G+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 47 SGRDVMGAAQTGTGKTASFSLPIIQRLLPQA-NTSASPARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A LR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
+ T+ Q V K +V ++ + S +VF + LA + G A
Sbjct: 225 SNAAASTVTQIVYDVAEGDKQAAVVKLIRDRSLKQVIVFCNSKIGASRLARQIERDGIIA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQS+R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 AAIHGDRSQSERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG +G A+SL + E + IEKLI + L
Sbjct: 345 IGRTGRAGASGDALSLCSPNERKQLADIEKLIKRTL 380
>gi|424869804|ref|ZP_18293485.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R497]
gi|402935190|gb|EJX54460.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R497]
Length = 501
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/347 (42%), Positives = 208/347 (59%), Gaps = 12/347 (3%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKD+IG AQTG+GKT AF LP+L+ +I ++ + V++PTRELAIQ E+
Sbjct: 37 AGKDVIGQAQTGTGKTAAFGLPMLE---KIDPDRHELQGL---VIAPTRELAIQTQEELY 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
LG +R + GG D+ +Q L RPHIVV TPGR++DH+ N LGT++ LVL
Sbjct: 91 RLGRDKKVRVQAVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHI-NRHTLKLGTVQTLVL 149
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEAD +LN F + +++I++ +P RQT LFSATM +K + +KNP ++ +K
Sbjct: 150 DEADEMLNMGFLEDIEKIISQVPDQRQTLLFSATMPPAIKNIGVKFMKNPHHVKIKAKEM 209
Query: 188 TVDTLKQQYRFVPAK-YKDCYLVYILTEVSASS-TMVFTRTCDATRLLALMLRNLGQRAI 245
T D + Q Y V AK Y+ ++ L +V T+VF RT LA L G RA
Sbjct: 210 TADLIDQYY--VRAKEYEKFDIMTRLFDVQTPELTIVFGRTKRRVDELARGLEARGYRAE 267
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G +SQ KR+ L FK+G +IL+ TDVA+RGLDI V V NYDIP + + Y+HR+
Sbjct: 268 GIHGDLSQQKRMSVLRSFKSGHLDILVATDVAARGLDISGVTHVYNYDIPQDPESYVHRI 327
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEF-PAEEEEVL 351
GRT RAG+ G++++ V E+++ IE L K++ P E+E
Sbjct: 328 GRTGRAGKGGMSVTFVTPNEMDYLHVIENLTKKRMTTLRPPTEKEAF 374
>gi|398835789|ref|ZP_10593146.1| DNA/RNA helicase, superfamily II [Herbaspirillum sp. YR522]
gi|398215227|gb|EJN01792.1| DNA/RNA helicase, superfamily II [Herbaspirillum sp. YR522]
Length = 487
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/335 (42%), Positives = 201/335 (60%), Gaps = 5/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT F+LPI+Q LL A + PA A +L+PTRELA Q+++
Sbjct: 53 GRDVMGAAQTGTGKTAGFSLPIIQLLLAHASTSAS-PARHPVRALILTPTRELADQVADN 111
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+A LR V+ GGVDM QT L IV+ATPGRL+DH+ K +L + L
Sbjct: 112 VKAYSRFTPLRSTVVFGGVDMAPQTATLRAGVEIVIATPGRLLDHVQQ-KTVNLSQTQIL 170
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
V+DEADR+L+ F L I+N++P+ RQ +FSAT + ++KKL + NPV IE A
Sbjct: 171 VMDEADRMLDMGFLPDLQRIINLLPKKRQNLMFSATFSPEIKKLAGSFQNNPVTIEVARS 230
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T + + Q V K + +I+ E + +VF+ T L+ L N G +A
Sbjct: 231 NATAERVTQTIYRVDESAKADAVSFIIRERNLKQVIVFSNTKIGASRLSRQLENEGVKAS 290
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G +Q++R+ AL FK G+ +L+ TDVA+RGLDI + VINYD+P N++DY+HR+
Sbjct: 291 AIHGDKTQNERMAALEAFKQGQIEVLVATDVAARGLDITDLPCVINYDMPYNAEDYVHRI 350
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
GRT RAG +G AISL + IEKLI KK
Sbjct: 351 GRTGRAGASGDAISLFCDKDERLLTDIEKLIKKKF 385
>gi|375107400|ref|ZP_09753661.1| DNA/RNA helicase, superfamily II [Burkholderiales bacterium
JOSHI_001]
gi|374668131|gb|EHR72916.1| DNA/RNA helicase, superfamily II [Burkholderiales bacterium
JOSHI_001]
Length = 492
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/335 (41%), Positives = 207/335 (61%), Gaps = 5/335 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF+LP+LQ +L+ EN PA A VL+PTRELA Q++
Sbjct: 60 GRDVMGAAQTGTGKTAAFSLPLLQKMLK-HENASMSPARHPVRALVLAPTRELADQVAAN 118
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+A +LR V+ GG+DM QT L +++ATPGRL+DH+ K L ++Y+
Sbjct: 119 VKAYAKHTNLRSTVVFGGIDMKPQTAELKAGVEVLIATPGRLLDHI-EAKNCVLNQVEYV 177
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L IL+ +PR RQT LFSAT + ++K+L + L++PV +E A
Sbjct: 178 VLDEADRMLDIGFLPDLQRILSYLPRQRQTLLFSATFSPEIKRLANSYLQDPVLVEVARP 237
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T ++Q++ V K ++ +L S S +VF + LA G +
Sbjct: 238 NATATNVEQRFYSVTDDDKRRVVMQLLRNRSLSQAIVFVNSKLGAARLARSFERDGLKTS 297
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G SQ +RL +L+ FK G+ +L+ TDVA+RGLDI + V N+D+P N++DY+HR+
Sbjct: 298 ALHGDKSQDERLKSLDAFKRGDVELLVATDVAARGLDIADLPAVFNFDVPFNAEDYVHRI 357
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
GRT RAG +G+A++LV + + IEKL+ KKL
Sbjct: 358 GRTGRAGASGLAVTLVTRDDARLISDIEKLLKKKL 392
>gi|357403915|ref|YP_004915839.1| ATP-dependent RNA helicase [Methylomicrobium alcaliphilum 20Z]
gi|351716580|emb|CCE22240.1| ATP-dependent RNA helicase [Methylomicrobium alcaliphilum 20Z]
Length = 425
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 152/388 (39%), Positives = 223/388 (57%), Gaps = 11/388 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D++ AQTG+GKT FALPILQ L E N++ P A +L PTRELA+Q+ + F+
Sbjct: 38 GRDVMAGAQTGTGKTAGFALPILQRLSETI-NKKPRP-VRALILVPTRELAVQVHQSFKD 95
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G ++L V+ GGV M Q L + IVVATPGRL+DH LG ++ LVLD
Sbjct: 96 YGKHVALFSEVIFGGVSMNGQAQQLRRGCDIVVATPGRLLDH-ARQGNVDLGRVEILVLD 154
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F++ +D IL ++PR+RQ LFSAT + ++K L L +P+ IEA +
Sbjct: 155 EADRMLDMGFKREVDAILALLPRLRQNLLFSATFSNEIKTLAGRLLHDPIAIEAPRQTID 214
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
DT++Q+ + +YK L Y++ + +VF RT LA L G R +
Sbjct: 215 ADTVEQRIYPIKREYKRELLSYLIGSGNWRQVLVFVRTRHGADRLAEQLIKDGIRTGVLH 274
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G SQ R+ AL FK+G+ +L+ TD+A+RGLDI + V+N+D+P+ ++DY+HR+GRT
Sbjct: 275 GDKSQGARMRALAGFKSGKIAVLVATDIAARGLDIDQLPHVVNFDLPSVAEDYVHRIGRT 334
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
RAG G AISLV E L IEKL+ + +P E + L R K+ ++ T
Sbjct: 335 GRAGWVGEAISLVCPEEAPMLLAIEKLLKRSIPRVADTGYEAVSLEVRPGAEKKDNKRTA 394
Query: 369 KDSGNKRRRKGGDEDDDIGRQFGINKKK 396
+ + ++R R +NKK+
Sbjct: 395 RSAPPVKKR--------THRAASVNKKR 414
>gi|385203300|ref|ZP_10030170.1| DNA/RNA helicase, superfamily II [Burkholderia sp. Ch1-1]
gi|385183191|gb|EIF32465.1| DNA/RNA helicase, superfamily II [Burkholderia sp. Ch1-1]
Length = 491
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 206/336 (61%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT +F+LPI+Q LL A + PA A +L+PTRELA Q++
Sbjct: 47 AGRDMMGAAQTGTGKTASFSLPIIQRLLPQASTSAS-PARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
+A +LR AV+ GGVDM Q+ L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVQAYAKHTALRSAVVFGGVDMNPQSEQLRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L++P IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSGEIKKLAATYLRDPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
ST ++Q V K +V ++ E +VF + LA L G A
Sbjct: 225 SNSTATNVRQIVYEVAEGDKTGAVVQLIRERGLKQVIVFCNSKIGASRLARSLERDGVIA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQ++R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 TAIHGDRSQNERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG +G A+SL + E + IEKLI + L
Sbjct: 345 IGRTGRAGASGDALSLCSPNERKQLADIEKLIKRPL 380
>gi|237745550|ref|ZP_04576030.1| ATP-dependent RNA helicase [Oxalobacter formigenes HOxBLS]
gi|229376901|gb|EEO26992.1| ATP-dependent RNA helicase [Oxalobacter formigenes HOxBLS]
Length = 470
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/346 (42%), Positives = 206/346 (59%), Gaps = 7/346 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
GKD++G AQTG+GKT ++LP+LQ+LL A N PA A +L PTRELA Q+ E
Sbjct: 52 GKDVMGAAQTGTGKTAGYSLPVLQSLLYYA-NASMSPARHPVRALILVPTRELADQVYED 110
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
SLR AV+ GGVDM QT L I++ATPGRL+DH+ K +LG L
Sbjct: 111 VRKYAKYTSLRTAVVFGGVDMSGQTGILRAGAEILIATPGRLLDHIQQ-KNVNLGQTGIL 169
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L I+N++P+ RQ LFSAT + +++KL + L PV +E A +
Sbjct: 170 VLDEADRMLDMGFLPDLQRIVNLLPKKRQNLLFSATFSSEIRKLANSFLDRPVSVEVARQ 229
Query: 186 YSTVDTLKQQ-YRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
+T D + Q YR A D + Y+L ++F+ T LA L G +A
Sbjct: 230 NATADNVTQTVYRIDEADKNDA-VEYLLRLHKREQVLIFSNTKAGASRLARQLEKKGLKA 288
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G +Q++R+ AL+ FK G +L+ TDVA+RGL I + VIN+D+P ++DY+HR
Sbjct: 289 AAIHGDKTQAERMAALDAFKEGNITVLVATDVAARGLHIEELPCVINFDLPFVAEDYVHR 348
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEV 350
+GRT RAG +G AISL + + + +IEKLI +KLP + E+
Sbjct: 349 IGRTGRAGASGEAISLCSAKDEKLLNEIEKLIKRKLPVHSIPDPEI 394
>gi|317025749|ref|XP_001389716.2| ATP-dependent RNA helicase drs1 [Aspergillus niger CBS 513.88]
Length = 827
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 138/318 (43%), Positives = 193/318 (60%), Gaps = 6/318 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKT AF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 346 GKDIVGSAVTGSGKTAAFVVPILERLLF---RPRKVPTSRVAILMPTRELAVQCYNVATK 402
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + LVGG + +Q L KRP +++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 403 LATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLD 462
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EIL IP+ RQT LFSATMT V KL R L PV++ +K +T
Sbjct: 463 EADRMLEDGFADELNEILTTIPKSRQTMLFSATMTDTVDKLIRVGLNRPVRLMVDAKKNT 522
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
TL Q++ R P + YL+Y+ E+ +VF R + ++ LG +A
Sbjct: 523 AVTLVQEFVRLRPGREDKRLGYLLYLCKEIYTGRVIVFFRQKKEAHRVRIIFGLLGLKAA 582
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ ++ F+ G+ L+ TD+ASRGLDI V+ VINY+ P + + Y+HRV
Sbjct: 583 ELHGSMSQEQRIKSVENFREGKAAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRV 642
Query: 306 GRTARAGRTGVAISLVNQ 323
GRTARAGR+G A ++ +
Sbjct: 643 GRTARAGRSGRACTIAAE 660
>gi|392427583|ref|YP_006468577.1| DNA/RNA helicase, superfamily II [Desulfosporosinus acidiphilus
SJ4]
gi|391357546|gb|AFM43245.1| DNA/RNA helicase, superfamily II [Desulfosporosinus acidiphilus
SJ4]
Length = 488
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 204/344 (59%), Gaps = 7/344 (2%)
Query: 1 MLLWFCDAGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAI 60
M + G+DLIG AQTG+GKT A+ +P+++ E +E VL+PTRELA+
Sbjct: 31 MTIPIALQGRDLIGQAQTGTGKTAAYGIPLIERFAEQSEQ------IQGIVLAPTRELAV 84
Query: 61 QISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLG 120
Q++E+ +G + + GG ++ Q AL KRPHI+VATPGRLMDH+ + L
Sbjct: 85 QVAEELNKIGQFKGIHSLPIYGGQNIDWQIRALRKRPHIIVATPGRLMDHMRR-RTIRLN 143
Query: 121 TLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKI 180
+K +VLDEAD +LN F + ++ IL IP +RQT LFSATM K+++ + + +K P I
Sbjct: 144 EIKIVVLDEADEMLNMGFLEDIETILKEIPEIRQTLLFSATMPKQIQNIAQRFMKEPEFI 203
Query: 181 EAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNL 240
+ + TV ++Q Y VP K K L +L S ++VF RT L+ L
Sbjct: 204 QIKATGVTVSDIEQHYIEVPEKLKFDVLTRLLDIQSPELSIVFARTKRRVDELSEGLNKR 263
Query: 241 GQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKD 300
G A I G ++QSKR L +FK G ++L+ TDVA+RGLDI V V N+DIP +++
Sbjct: 264 GYSAEGIHGDLTQSKRDSVLRQFKDGTIDVLVATDVAARGLDISGVTHVFNFDIPQDTES 323
Query: 301 YIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFP 344
Y+HRVGRT RAG+TG+AI+ V E+ IE +I +++ P
Sbjct: 324 YVHRVGRTGRAGKTGLAITFVTPREMGMLRLIESVIKRRVLRKP 367
>gi|240274680|gb|EER38196.1| ATP-dependent RNA helicase drs1 [Ajellomyces capsulatus H143]
Length = 828
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/316 (43%), Positives = 193/316 (61%), Gaps = 6/316 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKTGAF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 341 GKDVVGGAVTGSGKTGAFIIPILERLLY---RPRKVPTSRVVILMPTRELAVQCYNVATK 397
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + LVGG + +Q L KRP +++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 398 LATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLD 457
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EIL IP+ RQT LFSATMT V KL R L PV++ +K T
Sbjct: 458 EADRMLEDGFADELNEILTTIPKSRQTMLFSATMTNNVDKLIRVGLNRPVRLMVDAKKQT 517
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
V TL Q++ R P + + YL+ + + +VF R+ + ++ LG +
Sbjct: 518 VGTLIQEFVRLRPGREEKRLGYLIVLCKNIYKDRVIVFFRSKKEAHRVRIIFGLLGLKVT 577
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ ++ F+ G+ + L+ TDVASRGLDI V+ VINY+ P + + Y+HRV
Sbjct: 578 ELHGSMSQEQRIKSVEGFRDGKVSFLLATDVASRGLDIKGVETVINYEAPQSHEIYLHRV 637
Query: 306 GRTARAGRTGVAISLV 321
GRTARAGR+G A +L
Sbjct: 638 GRTARAGRSGRACTLA 653
>gi|162606504|ref|XP_001713282.1| DEAD box protein [Guillardia theta]
gi|12580748|emb|CAC27066.1| DEAD box protein [Guillardia theta]
Length = 386
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/342 (38%), Positives = 204/342 (59%), Gaps = 6/342 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDL+ +QTGSGKT A+ LP+LQ LL N + ++ P+REL QIS FE
Sbjct: 39 GKDLLVYSQTGSGKTLAYILPLLQKLLYKKNN------YLPIIIVPSRELVFQISTTFET 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+ ++R A L GG+D Q + + P I+++TPGRL++ L TK + LVLD
Sbjct: 93 ISCVFNIRIASLTGGIDPNVQLVMISSNPDIIISTPGRLVEILKLTKNLEIKFCTDLVLD 152
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD+L++ DF++ ++ I + + ++ LFSATM+ ++K++ + NPV+I +
Sbjct: 153 EADKLIHSDFKREINIINSKTNKNKKLMLFSATMSLGLEKIKFFKISNPVRIIINQNFFI 212
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
L Q Y F P +YK+ YL+Y++ E + F T T ++++L+ I
Sbjct: 213 SPNLIQNYIFCPFRYKEIYLLYLINEFYEEKLICFVETQKMTEKISILLKKFSFDCYIIH 272
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQ++R+ L+KF G+ IL+ TD+ASRGLDI +V ++INYD P KDYIHR GRT
Sbjct: 273 GSLSQNERIDTLSKFTNGKKKILVATDLASRGLDICAVSLIINYDFPIYLKDYIHRTGRT 332
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEV 350
RAGR G AISL+ QY+L + +IE ++ K+ E + ++
Sbjct: 333 GRAGRAGRAISLITQYDLRTFQKIESILNIKIAELNISKRKI 374
>gi|158292622|ref|XP_314012.3| AGAP005130-PA [Anopheles gambiae str. PEST]
gi|157017078|gb|EAA09455.3| AGAP005130-PA [Anopheles gambiae str. PEST]
Length = 531
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 152/379 (40%), Positives = 219/379 (57%), Gaps = 20/379 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG A+TGSGKT AFALPILQ L E A FA VL+PT ELA QI+EQF
Sbjct: 44 GQDCIGAAKTGSGKTFAFALPILQKLSE------EPTANFALVLTPTHELAHQIAEQFIV 97
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G ++ R V+ GG D + ++ L KRPHI+VA PGRL DHLT +S L++LV+D
Sbjct: 98 AGQPMNARVCVVTGGTDYLIESQQLEKRPHIIVAMPGRLADHLTGCNTYSFAALQFLVVD 157
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPV-----KIEAA 183
EADR+L F++ L I +P RQ FSAT+ K + + P+ +
Sbjct: 158 EADRMLCGSFDEDLMVINRFLPAKRQNLFFSATL----KDFLKTSIVFPIADDVFEWSEQ 213
Query: 184 SKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSA----SSTMVFTRTCDATRLLALMLRN 239
S +TV+TL Q+Y +D +V L + +S M+FT + ++L++ L +
Sbjct: 214 SPVATVETLDQRYLLCADYDRDTVMVEALRKYKEDQEDASIMIFTNSKKDCQILSMSLNS 273
Query: 240 LGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSK 299
G + + G + Q +R+ ALNKFK+ I+I TDVASRGLDI V +V+N+ +P
Sbjct: 274 FGFSNVCLHGFLRQRERVAALNKFKSKHVRIMIATDVASRGLDIHDVQLVVNHRLPKKPI 333
Query: 300 DYIHRVGRTARAGRTGVAISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVT 358
+YIHRVGRTARAGR G+AIS++ +LE +IE LI KL E+ ++ V + +V
Sbjct: 334 EYIHRVGRTARAGRAGMAISILRFPRDLEALGEIEALINTKLTEYSVDDRLVQRIFMQVK 393
Query: 359 EAKRISQMTIKDSGNKRRR 377
A+ +++ + + R+
Sbjct: 394 VARAEAEINLDNKDFDERK 412
>gi|242778101|ref|XP_002479171.1| ATP-dependent RNA helicase (Drs1), putative [Talaromyces stipitatus
ATCC 10500]
gi|218722790|gb|EED22208.1| ATP-dependent RNA helicase (Drs1), putative [Talaromyces stipitatus
ATCC 10500]
Length = 833
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 138/316 (43%), Positives = 191/316 (60%), Gaps = 6/316 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKTGAF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 348 GKDVVGGAVTGSGKTGAFIIPILERLLY---RPRKVPTSRVAILMPTRELAVQCYNVATK 404
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + L+GG + +Q L KRP I++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 405 LATYTDITFCQLIGGFSLREQENVLKKRPDIIIATPGRFIDHMRNSASFTVDTLEILVLD 464
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EIL IP+ RQT LFSATMT V KL R L PV++ +K T
Sbjct: 465 EADRMLEDGFADELNEILTTIPKSRQTMLFSATMTDSVDKLIRVGLNRPVRLMVDAKKQT 524
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
TL Q++ R P + L+++ +V A+ ++F R + ++ G +A
Sbjct: 525 AGTLVQEFVRLRPGREDKRLASLIHLCQQVYAARVIIFFRQKKEAHRVRVIFGLFGLKAA 584
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ ++ F+ G+ L+ TDVASRGLDI V+ VINY+ P + Y+HRV
Sbjct: 585 ELHGSMSQEQRIKSVEDFRDGKVAFLLATDVASRGLDIKGVETVINYEAPQTHEIYLHRV 644
Query: 306 GRTARAGRTGVAISLV 321
GRTARAGR+G A +L
Sbjct: 645 GRTARAGRSGRACTLA 660
>gi|126442203|ref|YP_001058242.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 668]
gi|167901897|ref|ZP_02489102.1| DEAD/DEAH box helicase [Burkholderia pseudomallei NCTC 13177]
gi|237811490|ref|YP_002895941.1| dead/deah box helicase [Burkholderia pseudomallei MSHR346]
gi|126221696|gb|ABN85202.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 668]
gi|237505268|gb|ACQ97586.1| dead/deah box helicase [Burkholderia pseudomallei MSHR346]
Length = 481
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 203/336 (60%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
+G+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 47 SGRDVMGAAQTGTGKTASFSLPIIQRLLPQA-NTSASPARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A LR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
+ T+ Q V K +V ++ + S +VF + LA + G A
Sbjct: 225 SNAAASTVTQIVYDVAEGDKQAAVVKLIRDRSLKQVIVFCNSKIGASRLARQIERDGIIA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQS+R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 AAIHGDRSQSERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG +G A+SL + E + IEKLI + L
Sbjct: 345 IGRTGRAGASGDALSLCSPNERKQLADIEKLIKRTL 380
>gi|167918160|ref|ZP_02505251.1| DEAD/DEAH box helicase [Burkholderia pseudomallei BCC215]
Length = 414
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 203/336 (60%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
+G+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 47 SGRDVMGAAQTGTGKTASFSLPIIQRLLPQA-NTSASPARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A LR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
+ T+ Q V K +V ++ + S +VF + LA + G A
Sbjct: 225 SNAAASTVTQIVYDVAEGDKQAAVVKLIRDRSLKQVIVFCNSKIGASRLARQIERDGIIA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQS+R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 AAIHGDRSQSERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG +G A+SL + E + IEKLI + L
Sbjct: 345 IGRTGRAGASGDALSLCSPNERKQLADIEKLIKRTL 380
>gi|167737747|ref|ZP_02410521.1| putative ATP-dependent RNA helicase 2 [Burkholderia pseudomallei
14]
Length = 409
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 203/336 (60%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
+G+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 47 SGRDVMGAAQTGTGKTASFSLPIIQRLLPQA-NTSASPARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A LR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQAIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
+ T+ Q V K +V ++ + S +VF + LA + G A
Sbjct: 225 SNAAASTVTQIVYDVAEGDKQAAVVKLIRDRSLKQVIVFCNSKIGASRLARQIERDGIIA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQS+R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 AAIHGDRSQSERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG +G A+SL + E + IEKLI + L
Sbjct: 345 IGRTGRAGASGDALSLCSPNERKQLADIEKLIKRTL 380
>gi|300120679|emb|CBK20233.2| unnamed protein product [Blastocystis hominis]
Length = 536
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 160/402 (39%), Positives = 228/402 (56%), Gaps = 44/402 (10%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVP-AFFACVLSPTRELAIQISEQF 66
AGK++ G+++TGSGKT FALPILQ L T P FA VL+PTRELAIQI +Q
Sbjct: 84 AGKNVTGVSETGSGKTAVFALPILQRL-------STDPYGIFAVVLTPTRELAIQIDDQM 136
Query: 67 EALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLV 126
+A G+ I +R +++GG ++Q AL KRPH+V+ATPGR + HL L ++V
Sbjct: 137 QAFGAPIHVRTTLIIGGQSFVKQAEALRKRPHVVIATPGRFLQHLKTADPPVTKRLGFIV 196
Query: 127 LDEADRLLNDDFEKSLDEILNVIPR---MRQTYLF-SATMTKKVKK--LQRACLKNPVK- 179
LDE DR+L+D + + EI++++ +LF +AT V+ ++ A + +P K
Sbjct: 197 LDECDRMLSDSLKTEVSEIVSLLKSRCVTHPQFLFLTATYDASVRSELVEFAEIAHPQKS 256
Query: 180 ---------IEAASKY--STVDTLKQQY----------RFVPAKYKDCYLVYILTE---- 214
I ASK STVD+L + Y RF P+ + +E
Sbjct: 257 MDIIPDYEYIPEASKQTNSTVDSLDEFYLLTPDHQYEPRFSPSNPVNPREDAEESEEDAK 316
Query: 215 ---VSASSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNIL 271
+ +S +VF TC +LL+ MLR +P+ +SQ++R AL KF+ +L
Sbjct: 317 KRLLHKASAIVFCNTCRMVQLLSEMLRAFQIENVPLHSLLSQNQRDAALAKFRNNRTAVL 376
Query: 272 ICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQ 331
+CTDVASRGLDIP VD+V NYD+P + DYIHRVGRTARAGR G A+S V +
Sbjct: 377 VCTDVASRGLDIPQVDLVTNYDLPKDPFDYIHRVGRTARAGRAGTAVSFVTLPSVGKLQA 436
Query: 332 IEKLIGKKLPEFPA-EEEEVLLLLERVTEAKRISQMTIKDSG 372
IE + GK+ EF EEE VL +L RV + R+++ + ++G
Sbjct: 437 IEAMTGKRCREFEGVEEENVLKILNRVGRSLRVARQFMVENG 478
>gi|167718732|ref|ZP_02401968.1| putative ATP-dependent RNA helicase 2 [Burkholderia pseudomallei
DM98]
Length = 409
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 203/336 (60%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
+G+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 47 SGRDVMGAAQTGTGKTASFSLPIIQRLLPQA-NTSASPARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A LR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
+ T+ Q V K +V ++ + S +VF + LA + G A
Sbjct: 225 SNAAASTVTQIVYDVAEGDKQAAVVKLIRDRSLKQVIVFCNSKIGASRLARQIERDGIIA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQS+R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 AAIHGDRSQSERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG +G A+SL + E + IEKLI + L
Sbjct: 345 IGRTGRAGASGDALSLCSPNERKQLADIEKLIKRTL 380
>gi|167814905|ref|ZP_02446585.1| putative ATP-dependent RNA helicase 2 [Burkholderia pseudomallei
91]
Length = 411
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 203/336 (60%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
+G+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 47 SGRDVMGAAQTGTGKTASFSLPIIQRLLPQA-NTSASPARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A LR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
+ T+ Q V K +V ++ + S +VF + LA + G A
Sbjct: 225 SNAAASTVTQIVYDVAEGDKQAAVVKLIRDRSLKQVIVFCNSKIGASRLARQIERDGIIA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQS+R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 AAIHGDRSQSERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG +G A+SL + E + IEKLI + L
Sbjct: 345 IGRTGRAGASGDALSLCSPNERKQLADIEKLIKRTL 380
>gi|161524137|ref|YP_001579149.1| DEAD/DEAH box helicase [Burkholderia multivorans ATCC 17616]
gi|160341566|gb|ABX14652.1| DEAD/DEAH box helicase domain protein [Burkholderia multivorans
ATCC 17616]
Length = 509
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/336 (44%), Positives = 201/336 (59%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 69 AGRDVMGAAQTGTGKTASFSLPIIQRLLPQA-NTSASPARHPVRALILTPTRELADQVAA 127
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A LR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 128 NVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 186
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 187 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVAR 246
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
ST + Q V K +V +L + +VF + LA L G A
Sbjct: 247 SNSTNANVTQIVYDVAEGDKQAAVVQLLRDRGLKQVIVFCNSKIGASRLARQLERDGVVA 306
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQ +R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 307 SAIHGDKSQLERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 366
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG TG A+SL + E + IEKLI + L
Sbjct: 367 IGRTGRAGATGDALSLCSPNERKQLADIEKLIKRPL 402
>gi|53718749|ref|YP_107735.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei K96243]
gi|53725492|ref|YP_103512.1| ATP-dependent RNA helicase RhlE [Burkholderia mallei ATCC 23344]
gi|67643786|ref|ZP_00442529.1| dead/deah box helicase [Burkholderia mallei GB8 horse 4]
gi|121599991|ref|YP_992380.1| DEAD/DEAH box helicase [Burkholderia mallei SAVP1]
gi|124383787|ref|YP_001026818.1| ATP-dependent RNA helicase RhlE [Burkholderia mallei NCTC 10229]
gi|126449417|ref|YP_001079898.1| DEAD/DEAH box helicase [Burkholderia mallei NCTC 10247]
gi|126454058|ref|YP_001065480.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 1106a]
gi|134281039|ref|ZP_01767748.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 305]
gi|167893438|ref|ZP_02480840.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 7894]
gi|217419830|ref|ZP_03451336.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 576]
gi|242317719|ref|ZP_04816735.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 1106b]
gi|386862473|ref|YP_006275422.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 1026b]
gi|403517911|ref|YP_006652044.1| DEAD/DEAH box helicase [Burkholderia pseudomallei BPC006]
gi|418390012|ref|ZP_12967823.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 354a]
gi|418538110|ref|ZP_13103738.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 1026a]
gi|418541611|ref|ZP_13107086.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 1258a]
gi|418547854|ref|ZP_13112990.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 1258b]
gi|418554032|ref|ZP_13118832.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 354e]
gi|52209163|emb|CAH35107.1| putative ATP-dependent RNA helicase 2 [Burkholderia pseudomallei
K96243]
gi|52428915|gb|AAU49508.1| ATP-dependent RNA helicase RhlE [Burkholderia mallei ATCC 23344]
gi|121228801|gb|ABM51319.1| DEAD/DEAH box helicase [Burkholderia mallei SAVP1]
gi|124291807|gb|ABN01076.1| ATP-dependent RNA helicase RhlE [Burkholderia mallei NCTC 10229]
gi|126227700|gb|ABN91240.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 1106a]
gi|126242287|gb|ABO05380.1| DEAD/DEAH box helicase [Burkholderia mallei NCTC 10247]
gi|134247345|gb|EBA47430.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 305]
gi|217397134|gb|EEC37150.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 576]
gi|238525219|gb|EEP88647.1| dead/deah box helicase [Burkholderia mallei GB8 horse 4]
gi|242140958|gb|EES27360.1| DEAD/DEAH box helicase [Burkholderia pseudomallei 1106b]
gi|385348870|gb|EIF55466.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 1026a]
gi|385357533|gb|EIF63583.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 1258a]
gi|385359528|gb|EIF65484.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 1258b]
gi|385370979|gb|EIF76201.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 354e]
gi|385375790|gb|EIF80532.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 354a]
gi|385659601|gb|AFI67024.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 1026b]
gi|403073554|gb|AFR15134.1| DEAD/DEAH box helicase [Burkholderia pseudomallei BPC006]
Length = 482
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 203/336 (60%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
+G+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 47 SGRDVMGAAQTGTGKTASFSLPIIQRLLPQA-NTSASPARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A LR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
+ T+ Q V K +V ++ + S +VF + LA + G A
Sbjct: 225 SNAAASTVTQIVYDVAEGDKQAAVVKLIRDRSLKQVIVFCNSKIGASRLARQIERDGIIA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQS+R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 AAIHGDRSQSERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG +G A+SL + E + IEKLI + L
Sbjct: 345 IGRTGRAGASGDALSLCSPNERKQLADIEKLIKRTL 380
>gi|423216420|ref|ZP_17202944.1| hypothetical protein HMPREF1074_04476 [Bacteroides xylanisolvens
CL03T12C04]
gi|392690791|gb|EIY84045.1| hypothetical protein HMPREF1074_04476 [Bacteroides xylanisolvens
CL03T12C04]
Length = 374
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/333 (42%), Positives = 202/333 (60%), Gaps = 2/333 (0%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
A +D++G AQTG+GKT +FA+PI+Q L E R A +L+PTRELA+QISE +
Sbjct: 37 AKRDILGCAQTGTGKTASFAIPIIQHLQLDKEAARR-QGIKALILTPTRELALQISECID 95
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
+R V+ GGV+ Q L K I+VATPGRL+D L + L T++Y VL
Sbjct: 96 DYSKHTRIRHGVIFGGVNQRPQVDLLRKGIDILVATPGRLLD-LMSQGHIHLDTIQYFVL 154
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L+ F + IL +P+ +QT FSATM + L ++ LKNPVKI K S
Sbjct: 155 DEADRMLDMGFIHDIKRILPKLPKEKQTLFFSATMPDSIISLTKSLLKNPVKIYITPKSS 214
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVD++KQ FV K K L+ IL++ S ++F+RT + +L G + I
Sbjct: 215 TVDSIKQVVYFVEKKEKSQLLISILSKAEDQSVLIFSRTKHNADKIVKILGKAGIGSQAI 274
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G+ SQ+ R AL FK+G+ +++ TD+ASRG+DI + +VINYD+P + Y+HR+GR
Sbjct: 275 HGNKSQAARQSALGNFKSGKTRVMVATDIASRGIDINELPLVINYDLPDVPETYVHRIGR 334
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
T RAG TG A++ +Q E + I+KL GKKL
Sbjct: 335 TGRAGNTGTALTFCSQEERKLVNDIQKLTGKKL 367
>gi|221211662|ref|ZP_03584641.1| ATP-dependent RNA helicase RhlE [Burkholderia multivorans CGD1]
gi|221169023|gb|EEE01491.1| ATP-dependent RNA helicase RhlE [Burkholderia multivorans CGD1]
Length = 495
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/336 (44%), Positives = 201/336 (59%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 47 AGRDVMGAAQTGTGKTASFSLPIIQRLLPQA-NTSASPARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A LR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
ST + Q V K +V +L + +VF + LA L G A
Sbjct: 225 SNSTNANVTQIVYDVAEGDKQAAVVQLLRDRGLKQVIVFCNSKIGASRLARQLERDGVVA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQ +R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 SAIHGDKSQLERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG TG A+SL + E + IEKLI + L
Sbjct: 345 IGRTGRAGATGDALSLCSPNERKQLADIEKLIKRPL 380
>gi|373955865|ref|ZP_09615825.1| DEAD/DEAH box helicase domain protein [Mucilaginibacter paludis DSM
18603]
gi|373892465|gb|EHQ28362.1| DEAD/DEAH box helicase domain protein [Mucilaginibacter paludis DSM
18603]
Length = 428
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/332 (43%), Positives = 193/332 (58%), Gaps = 1/332 (0%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
KDL+G AQTG+GKT AFA+PILQ L + R +L+PTRELAIQI E F A
Sbjct: 39 KDLLGCAQTGTGKTAAFAIPILQILYQEKVQNRDHKGIKTLILTPTRELAIQIDESFAAY 98
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
G L+ V+ GGV Q AL + I+VATPGRL+D L K L +LK LVLDE
Sbjct: 99 GKHTGLKHLVIFGGVSQHHQVEALKRGVDILVATPGRLLD-LVQQKFVHLESLKILVLDE 157
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADR+L+ F + +I+ IP RQT FSATM K+++ L L P K+E ST
Sbjct: 158 ADRMLDMGFVNDVKKIIAKIPVKRQTLFFSATMPKEIQTLADTILNKPEKVEVTPVSSTA 217
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
DT++Q FV K L++IL + + +VFTRT + L +G A I G
Sbjct: 218 DTIQQGIYFVDKNDKKSLLIHILKDKKIETALVFTRTKHGADKVVKDLIRVGITAEAIHG 277
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+ SQ+ R AL FK IL+ TD+A+RG+D+ + VINY++P + Y+HR+GRT
Sbjct: 278 NKSQNARQRALTNFKNRSTRILVATDIAARGIDVDDLTHVINYELPNVPETYVHRIGRTG 337
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
RAG +G+A+S + E E+ I KLI K +P
Sbjct: 338 RAGASGIALSFCDADEGEFLYDIHKLITKAIP 369
>gi|421467479|ref|ZP_15916098.1| DEAD/DEAH box helicase [Burkholderia multivorans ATCC BAA-247]
gi|400233671|gb|EJO63196.1| DEAD/DEAH box helicase [Burkholderia multivorans ATCC BAA-247]
Length = 487
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/336 (44%), Positives = 201/336 (59%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 47 AGRDVMGAAQTGTGKTASFSLPIIQRLLPQA-NTSASPARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A LR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
ST + Q V K +V +L + +VF + LA L G A
Sbjct: 225 SNSTNANVTQIVYDVAEGDKQAAVVQLLRDRGLKQVIVFCNSKIGASRLARQLERDGVVA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQ +R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 SAIHGDKSQLERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG TG A+SL + E + IEKLI + L
Sbjct: 345 IGRTGRAGATGDALSLCSPNERKQLADIEKLIKRPL 380
>gi|323525320|ref|YP_004227473.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia sp.
CCGE1001]
gi|323382322|gb|ADX54413.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. CCGE1001]
Length = 486
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 206/336 (61%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT +F+LPI+Q LL A + PA A +L+PTRELA Q++
Sbjct: 47 AGRDVMGAAQTGTGKTASFSLPIIQRLLPHASTSAS-PARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
++ +LR AV+ GGVDM Q+ L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVQSYAKHTALRSAVVFGGVDMNPQSDQLRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSGEIKKLAATYLRNPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
ST + Q V K +V ++ E + +VF + LA L G A
Sbjct: 225 SNSTATNVTQIVYEVAEGDKTGAVVQLIRERNLKQVIVFCNSKIGASRLARSLERDGVVA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQ++R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 TAIHGDRSQNERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG +G A+SL + E + IEKLI + L
Sbjct: 345 IGRTGRAGASGDALSLFSPNEKKQLADIEKLIKRPL 380
>gi|189351106|ref|YP_001946734.1| ATP-dependent RNA helicase [Burkholderia multivorans ATCC 17616]
gi|189335128|dbj|BAG44198.1| ATP-dependent RNA helicase [Burkholderia multivorans ATCC 17616]
Length = 487
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/336 (44%), Positives = 201/336 (59%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 47 AGRDVMGAAQTGTGKTASFSLPIIQRLLPQA-NTSASPARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A LR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
ST + Q V K +V +L + +VF + LA L G A
Sbjct: 225 SNSTNANVTQIVYDVAEGDKQAAVVQLLRDRGLKQVIVFCNSKIGASRLARQLERDGVVA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQ +R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 SAIHGDKSQLERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG TG A+SL + E + IEKLI + L
Sbjct: 345 IGRTGRAGATGDALSLCSPNERKQLADIEKLIKRPL 380
>gi|421477961|ref|ZP_15925746.1| DEAD/DEAH box helicase [Burkholderia multivorans CF2]
gi|400225606|gb|EJO55753.1| DEAD/DEAH box helicase [Burkholderia multivorans CF2]
Length = 487
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/336 (44%), Positives = 201/336 (59%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 47 AGRDVMGAAQTGTGKTASFSLPIIQRLLPQA-NTSASPARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A LR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
ST + Q V K +V +L + +VF + LA L G A
Sbjct: 225 SNSTNANVTQIVYDVAEGDKQAAVVQLLRDRGLKQVIVFCNSKIGASRLARQLERDGVVA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQ +R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 SAIHGDKSQLERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG TG A+SL + E + IEKLI + L
Sbjct: 345 IGRTGRAGATGDALSLCSPNERKQLADIEKLIKRPL 380
>gi|374600581|ref|ZP_09673583.1| DEAD/DEAH box helicase domain protein [Myroides odoratus DSM 2801]
gi|423325817|ref|ZP_17303657.1| hypothetical protein HMPREF9716_03014 [Myroides odoratimimus CIP
103059]
gi|373912051|gb|EHQ43900.1| DEAD/DEAH box helicase domain protein [Myroides odoratus DSM 2801]
gi|404605382|gb|EKB04983.1| hypothetical protein HMPREF9716_03014 [Myroides odoratimimus CIP
103059]
Length = 420
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/383 (38%), Positives = 225/383 (58%), Gaps = 16/383 (4%)
Query: 5 FCDAGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISE 64
F G D+IG AQTG+GKT +F++PILQ L + ++ + + +L+PTRELAIQI E
Sbjct: 47 FILQGHDIIGCAQTGTGKTASFSIPILQLLQQQVNPKKGIRSL---ILTPTRELAIQIDE 103
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
F+A G+ + ++ + GGV +Q L + +V+ATPGRL+D L N + SL ++
Sbjct: 104 NFKAYGAQLKIKHVAIFGGVSQHKQVGQLRRGVDVVIATPGRLLD-LLNQQLISLQHVEI 162
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
+VLDEADR+L+ F K +++I IP RQT FSATM ++KKL ++NP ++ +
Sbjct: 163 VVLDEADRMLDMGFVKDVNKIFTKIPTKRQTLFFSATMPPEIKKLVMQLVRNPKEVHVSP 222
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
ST T++Q F K L IL + S ++VFTRT LA L ++G A
Sbjct: 223 VSSTAGTIEQGVYFAEKDDKLDLLFSILKDASIQRSLVFTRTKFGADRLAKKLVSMGLSA 282
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G+ SQ+ R AL+ FKA + +LI TD+A+RG+DI + V+NY++P + Y+HR
Sbjct: 283 AAIHGNKSQNARQRALSDFKANKIRVLIATDIAARGIDIEELPHVVNYELPNIPESYVHR 342
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP----EFPAEEEEVLLLLERVTEA 360
+GRT RAG +GVA+S E++ +IEK+IG K+P FP E + + +++V +
Sbjct: 343 IGRTGRAGASGVAVSFCGTDEIKELKKIEKVIGIKIPVLSTTFPLSEPQPEVKVKQVKKR 402
Query: 361 KRISQMTIKDSGNKRRRKGGDED 383
+ N+ R++ G D
Sbjct: 403 HK--------RNNRPRKRPGQSD 417
>gi|310791524|gb|EFQ27051.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 550
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 170/396 (42%), Positives = 236/396 (59%), Gaps = 36/396 (9%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA+PILQ E A FA VL+PTRELA+QI EQF+A
Sbjct: 157 GRDCIGGSRTGSGKTVAFAVPILQKWAEDPT------AIFALVLTPTRELALQIFEQFKA 210
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKY 124
+ S SL+ ++ GG DM Q +AL +RPH+V+ATPGRL DH+ T G L +KY
Sbjct: 211 ISSPQSLKAILVTGGSDMRPQAIALAQRPHVVIATPGRLADHI-RTSGEDTICGLRRVKY 269
Query: 125 LVLDEADRLLNDDFEKSL----DEILNVIP--RMRQTYLFSATMTKKVKKLQRACLK--- 175
+VLDEADRLL+ S+ +E L+V+P RQT LF+AT+T +V+ L+ LK
Sbjct: 270 VVLDEADRLLDATGPGSMIPDVEECLSVLPPSSQRQTLLFTATITPEVRALKDMPLKPGK 329
Query: 176 NPVKIEAASKYSTV--DTLKQQYRFVPAKYKDCYL-VYILTEVSAS-STMVFTRTCDATR 231
PV + S TL Q + VP +++ YL ++LT+ + S ++F
Sbjct: 330 QPVFVCEVDTQSLAIPATLSQMHLQVPVTHREHYLHTFLLTDGNVEKSVIIFCNRTSTAD 389
Query: 232 LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVIN 291
L +LR L R + + Q +R+ L +F+A IL+ TDVASRGLDIP V +VIN
Sbjct: 390 YLHHLLRLLDHRVTSLHSGLPQRQRVDNLGRFRAAAARILVATDVASRGLDIPEVALVIN 449
Query: 292 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 351
YDIP N DYIHRVGRTARAGR G A++ V Q ++E L IE +G+++ + +EE V
Sbjct: 450 YDIPRNPDDYIHRVGRTARAGRKGEAVTFVGQRDVELVLAIEARVGRQMEAW--QEEGVN 507
Query: 352 L-------LLERVTEAKRISQMTIKDS---GNKRRR 377
L L+ V+E KR + + +++ G KR+R
Sbjct: 508 LETRVLRDSLKVVSEKKREALLELEEGREVGGKRKR 543
>gi|384084915|ref|ZP_09996090.1| DEAD/DEAH box helicase domain-containing protein [Acidithiobacillus
thiooxidans ATCC 19377]
Length = 420
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 138/334 (41%), Positives = 200/334 (59%), Gaps = 2/334 (0%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF-ACVLSPTRELAIQISEQF 66
+G DL+ AQTG+GKT AFA+PIL L +E P+ A VL PTRELA Q+ E
Sbjct: 39 SGVDLLAGAQTGTGKTAAFAMPILHKLAATSETAFHGPSSVRALVLVPTRELAAQVEESV 98
Query: 67 EALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLV 126
+ G +SLR +L+GGV + Q L + ++VATPGRL+DH+ + L ++ LV
Sbjct: 99 QLYGKNLSLRSLILIGGVKINPQMQKLRRSVDVLVATPGRLLDHIQQ-RSVDLSHVEILV 157
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
LDEADR+L+ F + + IL V+P+ RQ LFSAT + +++ L L NPV +E AS+
Sbjct: 158 LDEADRMLDMGFIRDIRRILAVLPKKRQNLLFSATFSPEIRTLADGLLNNPVSVEVASRN 217
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
+T DT+ Q++ V K L +++ E +VFTRT LA L G +A+
Sbjct: 218 ATADTVSQRFLAVDQDRKRELLTHLIGEQQWHQVLVFTRTKHGADRLAKHLSQGGMQAMA 277
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
I G SQ R AL +FK G+ +L+ TD+A+RG+DI + V+NY++P +DY+HR+G
Sbjct: 278 IHGDKSQGARTRALAEFKEGKVRVLVATDIAARGIDINELPHVVNYELPHVPEDYVHRIG 337
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
RT RAG G A+SLV+ E + +EKL+ +
Sbjct: 338 RTGRAGNNGQAVSLVSVDERKQLSDVEKLLKRSF 371
>gi|221199585|ref|ZP_03572629.1| dead/deah box helicase [Burkholderia multivorans CGD2M]
gi|221205515|ref|ZP_03578530.1| dead/deah box helicase [Burkholderia multivorans CGD2]
gi|221174353|gb|EEE06785.1| dead/deah box helicase [Burkholderia multivorans CGD2]
gi|221180870|gb|EEE13273.1| dead/deah box helicase [Burkholderia multivorans CGD2M]
Length = 487
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 150/336 (44%), Positives = 201/336 (59%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 47 AGRDVMGAAQTGTGKTASFSLPIIQRLLPQA-NTSASPARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A LR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
ST + Q V K +V +L + +VF + LA L G A
Sbjct: 225 SNSTNANVTQIVYDVAEGDKQAAVVQLLRDRGLKQVIVFCNSKIGASRLARQLERDGVVA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQ +R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 SAIHGDKSQLERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG TG A+SL + E + IEKLI + L
Sbjct: 345 IGRTGRAGATGDALSLCSPNERKQLADIEKLIKRPL 380
>gi|76808776|ref|YP_332762.1| ATP-dependent RNA helicase 2 [Burkholderia pseudomallei 1710b]
gi|76578229|gb|ABA47704.1| putative ATP-dependent RNA helicase 2 [Burkholderia pseudomallei
1710b]
Length = 559
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 203/336 (60%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
+G+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 124 SGRDVMGAAQTGTGKTASFSLPIIQRLLPQA-NTSASPARHPVRALILTPTRELADQVAA 182
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A LR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 183 NVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 241
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 242 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVAR 301
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
+ T+ Q V K +V ++ + S +VF + LA + G A
Sbjct: 302 SNAAASTVTQIVYDVAEGDKQAAVVKLIRDRSLKQVIVFCNSKIGASRLARQIERDGIIA 361
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQS+R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 362 AAIHGDRSQSERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 421
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG +G A+SL + E + IEKLI + L
Sbjct: 422 IGRTGRAGASGDALSLCSPNERKQLADIEKLIKRTL 457
>gi|19114126|ref|NP_593214.1| ATP-dependent RNA helicase Ddx27/Drs1 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|1351656|sp|Q09903.1|DRS1_SCHPO RecName: Full=ATP-dependent RNA helicase drs1
gi|1065890|emb|CAA91889.1| ATP-dependent RNA helicase Ddx27/Drs1 (predicted)
[Schizosaccharomyces pombe]
Length = 754
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 134/318 (42%), Positives = 195/318 (61%), Gaps = 6/318 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKT AF +PIL+ LL + VP +L PTRELA+Q
Sbjct: 296 GKDIVGAAVTGSGKTAAFIVPILERLLY---RPKKVPTTRVLILCPTRELAMQCHSVATK 352
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+ S + + +GG+ + Q L KRP IV+ATPGR +DH+ N++GF++ ++ +V+D
Sbjct: 353 IASFTDIMVCLCIGGLSLKLQEQELRKRPDIVIATPGRFIDHMRNSQGFTVENIEIMVMD 412
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EI+ P+ RQT LFSATMT KV L R L PV++ +K +T
Sbjct: 413 EADRMLEDGFADELNEIIQACPKSRQTMLFSATMTDKVDDLIRLSLNRPVRVFVDNKKTT 472
Query: 189 VDTLKQQY-RFVPAK--YKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
L Q++ R P + + L+Y+ E+ T++F R+ + ++ L A
Sbjct: 473 AKLLTQEFVRVRPQRELLRPAMLIYLCKELFHRRTIIFFRSKAFAHKMRVIFGLLSLNAT 532
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G +SQ +R+ AL F+ G+CN L+ TDVASRG+DI +++VINY+ P + Y+HRV
Sbjct: 533 EIHGSLSQEQRVRALEDFRDGKCNYLLATDVASRGIDIKGIEVVINYEAPATHEVYLHRV 592
Query: 306 GRTARAGRTGVAISLVNQ 323
GRTARAGR+G AI+L +
Sbjct: 593 GRTARAGRSGRAITLAGE 610
>gi|329956784|ref|ZP_08297353.1| ATP-dependent RNA helicase RhlE [Bacteroides clarus YIT 12056]
gi|328523823|gb|EGF50910.1| ATP-dependent RNA helicase RhlE [Bacteroides clarus YIT 12056]
Length = 372
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 141/332 (42%), Positives = 200/332 (60%), Gaps = 4/332 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G AQTG+GKT AFA+PI+Q L E +++ A +L+PTRELA+QISE +
Sbjct: 38 GKDILGCAQTGTGKTAAFAIPIIQHLQAGKERDKSIKAL---ILTPTRELALQISECIDD 94
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+R V+ GGV+ Q L K I+VATPGRL+D L N L ++++ VLD
Sbjct: 95 YAKYTQVRHGVIFGGVNQRAQVNMLHKGVDILVATPGRLLD-LMNQGYIRLDSVRHFVLD 153
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F + +L +P+ +QT FSATM + L + LK PVKI K ST
Sbjct: 154 EADRMLDMGFIHDIKRLLPKLPKEKQTLFFSATMPDTIIALTNSLLKQPVKIAITPKSST 213
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDT++Q FV K K L+ IL + S +VF+RT + +L G + I
Sbjct: 214 VDTIEQTVYFVEKKEKSKLLISILHKAEGQSVLVFSRTKHNADRIVRVLSKAGIGSQAIH 273
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ+ R AL FK G+ ++I TD+A+RG+DI + +VINYD+P + Y+HR+GRT
Sbjct: 274 GNKSQNARQSALENFKTGKIRVMIATDIAARGIDINELPLVINYDLPDVPETYVHRIGRT 333
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
RAG +G A++ +Q E + I+KL GKKL
Sbjct: 334 GRAGNSGTALTFCSQEERKLVSDIQKLTGKKL 365
>gi|298385203|ref|ZP_06994762.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. 1_1_14]
gi|383122089|ref|ZP_09942788.1| hypothetical protein BSIG_5243 [Bacteroides sp. 1_1_6]
gi|251837561|gb|EES65653.1| hypothetical protein BSIG_5243 [Bacteroides sp. 1_1_6]
gi|298262347|gb|EFI05212.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. 1_1_14]
Length = 374
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 144/334 (43%), Positives = 202/334 (60%), Gaps = 4/334 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQAL-LEIAENQRTVPAFFACVLSPTRELAIQISEQF 66
A KD++G AQTG+GKT +FA+PI+Q L L E +R+ A +L+PTRELA+QISE
Sbjct: 37 AKKDILGCAQTGTGKTASFAIPIIQHLHLNKGEGKRS--GIKALILTPTRELALQISECI 94
Query: 67 EALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLV 126
E +R V+ GGV+ Q L K I+VATPGRL+D L N L ++Y V
Sbjct: 95 EDYSKYTRIRHGVIFGGVNQRPQVDMLHKGIDILVATPGRLLD-LMNQGHIRLDNIQYFV 153
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
LDEADR+L+ F + IL +P+ +QT FSATM + L + LKNP+KI K
Sbjct: 154 LDEADRMLDMGFIHDIKRILPKLPKEKQTLFFSATMPDTIIALTNSLLKNPLKIYVTPKS 213
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
STVD++KQ FV K K L+ IL + S ++F+RT + +L G +
Sbjct: 214 STVDSIKQLVYFVEKKEKSLLLISILQKSEDRSVLIFSRTKHNADKIVKILGKAGIGSQA 273
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
I G+ SQ+ R AL FK+G+ +++ TD+ASRG+DI + +VINYD+P + Y+HR+G
Sbjct: 274 IHGNKSQAARQSALGNFKSGKTRVMVATDIASRGIDINELPLVINYDLPDVPETYVHRIG 333
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
RT RAG G+A++ +Q E + I+KL GKKL
Sbjct: 334 RTGRAGNAGMALTFCSQEERKQINDIQKLTGKKL 367
>gi|417412705|gb|JAA52724.1| Putative atp-dependent rna helicase, partial [Desmodus rotundus]
Length = 788
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 141/329 (42%), Positives = 198/329 (60%), Gaps = 6/329 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+ A TG+GKT AFALPIL+ L+ R P VL PTREL IQ+ +
Sbjct: 247 GKDICACAATGTGKTAAFALPILERLIY---KPRQAPVTRVLVLVPTRELGIQVHSVVKQ 303
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L S+ + VGG+D+ Q AL P I++ATPGRL+DHL N F L +++ L+LD
Sbjct: 304 LAQFCSITTCLAVGGLDVKSQEAALRAVPDILIATPGRLIDHLHNCPSFHLSSIEVLILD 363
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L++ FE+ + EI+ + RQT LFSATMT +VK L LKNPV+I S
Sbjct: 364 EADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDV 423
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
L+Q++ R P + D + +LT M+FT+T + ++L +G +
Sbjct: 424 APFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVG 483
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G++SQ++RL AL +FK + +IL+ TDVA+RGLDI V VIN+ +P K Y+HRV
Sbjct: 484 ELHGNLSQAQRLEALRRFKDEQIDILVATDVAARGLDIAGVKTVINFTMPNTIKHYVHRV 543
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEK 334
GRTARAGR G ++SLV + E + +I K
Sbjct: 544 GRTARAGRAGRSVSLVGEEERKMLKEIVK 572
>gi|365122316|ref|ZP_09339220.1| hypothetical protein HMPREF1033_02566 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642816|gb|EHL82156.1| hypothetical protein HMPREF1033_02566 [Tannerella sp.
6_1_58FAA_CT1]
Length = 421
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 145/336 (43%), Positives = 201/336 (59%), Gaps = 4/336 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALL-EIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
GKDL+G AQTG+GKT AF++PI+Q LL E N R + A +L+PTRELA QI +
Sbjct: 38 GKDLLGCAQTGTGKTAAFSIPIIQNLLAEAGGNGRR--SVRALILTPTRELAAQIGDNIN 95
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
A L+ V+ GGV Q AL K I+VATPGRL+D L + K L T+++ VL
Sbjct: 96 AYSRHTRLKHTVIFGGVSQKSQVEALRKGVDILVATPGRLLD-LVSQKIIDLQTIRFFVL 154
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L+ F + +IL ++PR RQ+ FSATM +++KL R L +P IE S
Sbjct: 155 DEADRMLDMGFIHDIKKILLLLPRKRQSLFFSATMPAEIEKLSRQILNHPEMIEVTPASS 214
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVD ++Q V K L+++L + + S +VFTRT +A +L G +A I
Sbjct: 215 TVDVIEQHVYSVEKADKSKLLLHLLQDKNIESVLVFTRTKHGADKVARILGRSGVKAEAI 274
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G+ SQ+ R+ ALN F+ +LI TD+A+ G+DI + VINYD+P + Y+HR+GR
Sbjct: 275 HGNKSQNARVKALNNFRDHITRVLIATDIAAWGIDIDHLSHVINYDLPNIPETYVHRIGR 334
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEF 343
T RAGR+G A S + E + IEKL GK + E
Sbjct: 335 TGRAGRSGAAFSFCDSEEKVYLRDIEKLTGKHIAEI 370
>gi|350544972|ref|ZP_08914491.1| ATP-dependent RNA helicase Bcep18194_A5658 [Candidatus Burkholderia
kirkii UZHbot1]
gi|350527233|emb|CCD38619.1| ATP-dependent RNA helicase Bcep18194_A5658 [Candidatus Burkholderia
kirkii UZHbot1]
Length = 493
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 160/398 (40%), Positives = 226/398 (56%), Gaps = 13/398 (3%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
+G+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 53 SGRDVMGAAQTGTGKTASFSLPIIQRLLPTA-NTSASPARHPVRALMLTPTRELADQVAA 111
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
+ LR V+ GGVDM Q+ AL + I++ATPGRL+DH+ K +LG ++
Sbjct: 112 NVQTYSKHTPLRSTVVFGGVDMNPQSDALRRGVEILIATPGRLLDHVQQ-KTVNLGQVQM 170
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ QT LFSAT + ++KKL L+NP IE A
Sbjct: 171 LVLDEADRMLDMGFLPDLQRILNLLPKECQTLLFSATFSAEIKKLASTYLRNPQTIEVAR 230
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
ST ++Q V K + ++ E +VF + LA +L G A
Sbjct: 231 SNSTNANVRQIVYEVHESDKSGAVAQLIRERKLKQVIVFCNSKIGASRLARVLERDGIVA 290
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G +QS+R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 291 TAIHGDRTQSERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 350
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAE-------EEEVLLLLERV 357
+GRT RAG +G A+SL + E + IEKLI + L P E E ER
Sbjct: 351 IGRTGRAGASGDALSLCSANERKQLADIEKLIKRPLEVDPLEVTTRARREGPGSRRDERF 410
Query: 358 TEAKR-ISQMTIKDSGNKRRRKGGDEDDDIGRQFGINK 394
++R + + ++ RRR G D GRQ I++
Sbjct: 411 GRSERGKHRHSSREEAGSRRRAMGTHDRPRGRQQPIDE 448
>gi|57529371|ref|NP_001006293.1| probable ATP-dependent RNA helicase DDX27 [Gallus gallus]
gi|53130268|emb|CAG31463.1| hypothetical protein RCJMB04_6k21 [Gallus gallus]
Length = 758
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 140/329 (42%), Positives = 199/329 (60%), Gaps = 6/329 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+ A TG+GKT AF LP+L+ L+ R P VL PTREL IQ+ +
Sbjct: 217 GKDICACAATGTGKTAAFILPVLERLIY---KPRQAPITRVLVLVPTRELGIQVHSVTKQ 273
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L S+ + VGG+D+ Q AL P I++ATPGRL+DHL N F L +++ L+LD
Sbjct: 274 LAQFSSVTTCLAVGGLDVKTQEAALRSGPDILIATPGRLIDHLHNCPSFHLSSVEVLILD 333
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L++ FE+ + EI+ + R RQT LFSATMT++VK L LKNP +I S
Sbjct: 334 EADRMLDEYFEEQMKEIIRLCSRHRQTMLFSATMTEEVKDLASVSLKNPTRIFVNSNTDV 393
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
L+Q++ R P + D + +LT M+FT+T + ++L +G R
Sbjct: 394 APFLRQEFIRIRPNREGDREAIVSALLTRTFPDHVMLFTQTKKQAHRMHILLGLMGLRVG 453
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G++SQ++RL AL +FK + +IL+ TDVA+RGLDI V VIN+ +P +K Y+HRV
Sbjct: 454 ELHGNLSQAQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTTKHYVHRV 513
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEK 334
GRTARAGR G ++SLV + E + +I K
Sbjct: 514 GRTARAGRAGRSVSLVGEEERKMLKEIVK 542
>gi|300772766|ref|ZP_07082636.1| ATP-dependent RNA helicase RhlE [Sphingobacterium spiritivorum ATCC
33861]
gi|300761069|gb|EFK57895.1| ATP-dependent RNA helicase RhlE [Sphingobacterium spiritivorum ATCC
33861]
Length = 435
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 151/392 (38%), Positives = 221/392 (56%), Gaps = 17/392 (4%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
KDL+ AQTG+GKT AFA+PILQ +L ++ + VL+PTRELAIQI E F+A
Sbjct: 56 KDLLACAQTGTGKTAAFAIPILQ-MLTYSKEKTAQKRIRTLVLTPTRELAIQIKENFDAY 114
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
+ +R V+ GGV Q AL K I++ATPGRL+D L N L L+Y VLDE
Sbjct: 115 SKELPIRNLVIYGGVGQQPQRDALRKGIDILIATPGRLLD-LYNQGFIDLKQLEYFVLDE 173
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADR+L+ F + +++++IP+ RQT LFSATM +++KL L++P K+E + +T
Sbjct: 174 ADRMLDMGFIHDVKKVISIIPKKRQTLLFSATMPAEIQKLASHILEDPSKVEVTPESTTA 233
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
+ ++Q FV K L ++L + T+VF+RT +A L G +A I G
Sbjct: 234 EKIQQSVYFVSKSDKRHLLTHLLKSENIEHTLVFSRTKHGADRIAKDLAKQGIQAAAIHG 293
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+ SQS R ALN FK + +L+ TD+A+RG+DI + VIN+D+P + Y+HR+GRT
Sbjct: 294 NKSQSARQNALNNFKDRKLRVLVATDIAARGIDIDDLSYVINFDLPNIPESYVHRIGRTG 353
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK 369
RAG+ G AIS + E + L IEK I ++P RV + ++ K
Sbjct: 354 RAGKDGKAISFCDDEEYAYLLDIEKSIRMEIP--------------RVEDQPYSLHISPK 399
Query: 370 DSGNKRRRKGGDEDDDIGRQFGINKKKLSKRK 401
G ++ G D++ R G +KK + K
Sbjct: 400 KPGQAAKKPGTDKNRSKARS-GASKKPFRRGK 430
>gi|296808427|ref|XP_002844552.1| ATP-dependent RNA helicase drs1 [Arthroderma otae CBS 113480]
gi|238844035|gb|EEQ33697.1| ATP-dependent RNA helicase drs1 [Arthroderma otae CBS 113480]
Length = 807
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 137/316 (43%), Positives = 194/316 (61%), Gaps = 6/316 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKT AF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 330 GKDVVGGAVTGSGKTAAFIVPILERLLY---RPRKVPTSRVAILMPTRELAVQCYNVATK 386
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + LVGG + +Q L KRP +++ATPGR +DH+ N+ F++ TL+ L+LD
Sbjct: 387 LATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILILD 446
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F + L+EIL IP+ RQT LFSATMT V KL R L P+++ SK T
Sbjct: 447 EADRMLEDGFAEELNEILTTIPKSRQTMLFSATMTSSVDKLIRVGLNKPIRLMVDSKKQT 506
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
V TL Q++ R P + YL+++ V S +VF R + ++ +G +A
Sbjct: 507 VGTLVQEFVRLRPGREDKRLAYLMFLCKTVYTSRVIVFFRQKKEAHRVRIVFGLMGLKAA 566
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ ++ F+ G+ + L+ TD+ASRGLDI V+ VINY+ P + + Y+HRV
Sbjct: 567 ELHGSMSQEQRIKSVEDFRDGKVSYLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRV 626
Query: 306 GRTARAGRTGVAISLV 321
GRTARAGR+G A ++
Sbjct: 627 GRTARAGRSGRACTIA 642
>gi|255941704|ref|XP_002561621.1| Pc16g13220 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586244|emb|CAP93992.1| Pc16g13220 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 815
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 136/318 (42%), Positives = 195/318 (61%), Gaps = 6/318 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKT AF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 341 GKDIVGSAVTGSGKTAAFIVPILERLLF---RPRKVPTSRVVILMPTRELAVQCYNVSVK 397
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + LVGG + +Q L KRP +++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 398 LATFTDVTFCQLVGGFSLREQENVLKKRPDVIIATPGRFIDHMRNSPSFTVDTLEILVLD 457
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EIL IP+ RQT LFSATMT + KL R + PV++ SK +T
Sbjct: 458 EADRMLEDGFADELNEILTTIPKSRQTMLFSATMTDSIDKLIRVGMNRPVRLMVDSKKNT 517
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
V TL Q++ R P + YL+++ E+ + ++F R + ++ LG +A
Sbjct: 518 VSTLVQEFVRLRPGREDKRLGYLLHLCKEIYSKRVIIFFRQKKEAHRVRIIFSLLGLKAA 577
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G +SQ +R+ ++ F+ G+ L+ TDVASRGLDI V+ VINY+ P + + Y+HRV
Sbjct: 578 ELHGSLSQEQRIKSVENFRDGKVAFLLATDVASRGLDIKGVETVINYEAPQSHEIYLHRV 637
Query: 306 GRTARAGRTGVAISLVNQ 323
GRTARAGR+G A ++ +
Sbjct: 638 GRTARAGRSGRACTIAAE 655
>gi|456062808|ref|YP_007501778.1| DEAD/DEAH box helicase domain-containing protein [beta
proteobacterium CB]
gi|455440105|gb|AGG33043.1| DEAD/DEAH box helicase domain-containing protein [beta
proteobacterium CB]
Length = 472
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 148/340 (43%), Positives = 209/340 (61%), Gaps = 9/340 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPA---FFACVLSPTRELAIQISE 64
AG DL+G AQTG+GKT AF LPI+Q +L A + + PA A VL+PTRELA+Q++E
Sbjct: 60 AGSDLMGAAQTGTGKTAAFVLPIIQKILRHASSSAS-PARHPIRALVLTPTRELAVQVAE 118
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
LR AV+ GGVDM +Q L I++ATPGRL+DH+ +K +L ++
Sbjct: 119 NAANYSKHTDLRAAVVYGGVDMKEQVAILRGGVEILIATPGRLLDHI-GSKVANLSQVEI 177
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L I+++IP RQT LFSAT + ++KKL ++ L+ PV +E A
Sbjct: 178 LVLDEADRMLDMGFLPDLQRIIDLIPAQRQTLLFSATFSPEIKKLAQSYLRTPVTVEVAR 237
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVS----ASSTMVFTRTCDATRLLALMLRNL 240
+ + DT+KQ V + K +V +L + + ++FT + LA L
Sbjct: 238 QNAAADTVKQVVHMVSSADKQRAIVKVLEARTRQGLSRQCIIFTNSRLGCARLARSLERD 297
Query: 241 GQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKD 300
G +A I G SQ +R L+ FK+G L+ TDVA+RGLDIPS+ VIN+++P N++D
Sbjct: 298 GIKAGAIHGDKSQGERTLTLDAFKSGAIEALVATDVAARGLDIPSMPCVINHELPFNAED 357
Query: 301 YIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+IHR+GRT RAG G AI+LV+ E IEKL+ +KL
Sbjct: 358 FIHRIGRTGRAGSKGDAIALVDASEKRLLDDIEKLMKRKL 397
>gi|154282923|ref|XP_001542257.1| 2-isopropylmalate synthase [Ajellomyces capsulatus NAm1]
gi|150410437|gb|EDN05825.1| 2-isopropylmalate synthase [Ajellomyces capsulatus NAm1]
Length = 1466
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 139/318 (43%), Positives = 193/318 (60%), Gaps = 6/318 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKTGAF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 342 GKDVVGGAVTGSGKTGAFIIPILERLLY---RPRKVPTSRVAILMPTRELAVQCYNVATK 398
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + LVGG + +Q L KRP +++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 399 LATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLD 458
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EIL IP+ RQT LFSATMT V KL R L PV++ +K T
Sbjct: 459 EADRMLEDGFADELNEILTTIPKSRQTMLFSATMTNNVDKLIRVGLSRPVRLMVDAKKQT 518
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
V TL Q++ R P + + YL+ + + +VF R+ + ++ LG +
Sbjct: 519 VGTLIQEFVRLRPGREEKRLGYLIVLCKNIYKDRVIVFFRSKKEAHRVRIIFGLLGLKVT 578
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ ++ F+ G+ + L+ TDVASRGLDI V+ VINY+ P + Y+HRV
Sbjct: 579 ELHGSMSQEQRIKSVESFRDGKVSFLLATDVASRGLDIKGVETVINYEAPQSHAIYLHRV 638
Query: 306 GRTARAGRTGVAISLVNQ 323
GRTARAGR+G A +L +
Sbjct: 639 GRTARAGRSGRACTLAAE 656
>gi|327352045|gb|EGE80902.1| 2-isopropylmalate synthase [Ajellomyces dermatitidis ATCC 18188]
Length = 834
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 138/318 (43%), Positives = 193/318 (60%), Gaps = 6/318 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKTGAF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 348 GKDVVGGAVTGSGKTGAFIIPILERLLY---RPRKVPTSRVAILMPTRELAVQCYNVATK 404
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + LVGG + +Q L KRP +++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 405 LATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLD 464
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EIL IP+ RQT LFSATMT V KL R L PV++ +K T
Sbjct: 465 EADRMLEDGFADELNEILTTIPKSRQTMLFSATMTNNVDKLIRVGLNRPVRLMVDAKKQT 524
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
V TL Q++ R P + YL+ + + ++F R + ++ +G +A
Sbjct: 525 VGTLVQEFVRLRPGREDKRLGYLMVLCKTIYKDRVIIFFRAKKEAHRVRIIFGLMGLKAA 584
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ ++ F+ G+ + L+ TDVASRGLDI V+ VINY+ P + + Y+HRV
Sbjct: 585 ELHGSMSQEQRIKSVESFRDGKVSFLLATDVASRGLDIKGVETVINYEAPQSHEIYLHRV 644
Query: 306 GRTARAGRTGVAISLVNQ 323
GRTARAGR+G A +L +
Sbjct: 645 GRTARAGRSGRACTLAAE 662
>gi|374384807|ref|ZP_09642324.1| hypothetical protein HMPREF9449_00710 [Odoribacter laneus YIT
12061]
gi|373227611|gb|EHP49924.1| hypothetical protein HMPREF9449_00710 [Odoribacter laneus YIT
12061]
Length = 397
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 208/355 (58%), Gaps = 23/355 (6%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQAL------LEIAENQRTVPAFF------------- 48
+GKD++G+AQTG+GKT AFA+PILQ L ++++ + +F
Sbjct: 37 SGKDILGIAQTGTGKTAAFAIPILQHLSQNNASFSVSQDTQEKKSFSRQENNPGKKYRKR 96
Query: 49 ---ACVLSPTRELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPG 105
A +L+PTRELA+QI + F G LR V+ GG+ + QT AL + I+VATPG
Sbjct: 97 EIQALILTPTRELALQIGDSFTDYGKYTGLRHCVIFGGIKQLVQTTALRRGVDILVATPG 156
Query: 106 RLMDHLTNTKGFSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKK 165
RL+D L N L +LK+ VLDEADR+L+ F + IL +P QT LFSATM +
Sbjct: 157 RLLD-LMNQGFVDLSSLKHFVLDEADRMLDMGFINDIKRILLKLPAQHQTLLFSATMPQS 215
Query: 166 VKKLQRACLKNPVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTR 225
+ L + LK PV++E S VDT++Q FV K LV +L + S +VF+R
Sbjct: 216 IAALSASILKKPVRVEVNPVSSPVDTVEQCIYFVEKMKKKNLLVQLLGQDIKKSVLVFSR 275
Query: 226 TCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPS 285
T +A L G R I G+ SQ +R ALN FK+G+ +++ TD+A+RG+DI
Sbjct: 276 TKHGADNIARSLSKEGIRTESIHGNKSQGQRQRALNAFKSGKVKVMVATDIAARGIDIDR 335
Query: 286 VDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
++MVINYD+P ++ Y+HR+GRT RAG TG A++ + E +I+KL GKKL
Sbjct: 336 LEMVINYDLPDTAETYVHRIGRTGRAGNTGTALTFCSPDEKVMVKEIQKLTGKKL 390
>gi|239612877|gb|EEQ89864.1| 2-isopropylmalate synthase [Ajellomyces dermatitidis ER-3]
Length = 834
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 138/318 (43%), Positives = 193/318 (60%), Gaps = 6/318 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKTGAF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 348 GKDVVGGAVTGSGKTGAFIIPILERLLY---RPRKVPTSRVAILMPTRELAVQCYNVATK 404
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + LVGG + +Q L KRP +++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 405 LATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLD 464
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EIL IP+ RQT LFSATMT V KL R L PV++ +K T
Sbjct: 465 EADRMLEDGFADELNEILTTIPKSRQTMLFSATMTNNVDKLIRVGLNRPVRLMVDAKKQT 524
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
V TL Q++ R P + YL+ + + ++F R + ++ +G +A
Sbjct: 525 VGTLVQEFVRLRPGREDKRLGYLMVLCKTIYKDRVIIFFRAKKEAHRVRIIFGLMGLKAA 584
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ ++ F+ G+ + L+ TDVASRGLDI V+ VINY+ P + + Y+HRV
Sbjct: 585 ELHGSMSQEQRIKSVESFRDGKVSFLLATDVASRGLDIKGVETVINYEAPQSHEIYLHRV 644
Query: 306 GRTARAGRTGVAISLVNQ 323
GRTARAGR+G A +L +
Sbjct: 645 GRTARAGRSGRACTLAAE 662
>gi|340522490|gb|EGR52723.1| predicted protein [Trichoderma reesei QM6a]
Length = 560
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 167/396 (42%), Positives = 243/396 (61%), Gaps = 36/396 (9%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA+P+LQ E A FA VL+PTRELA+QI EQF+A
Sbjct: 167 GRDCIGGSRTGSGKTVAFAVPVLQKWAEDPT------AIFAVVLTPTRELALQIYEQFKA 220
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKY 124
+ S SL+ ++ GG DM Q +AL +RPH+++ATPGRL DH+ T G L ++Y
Sbjct: 221 ISSPQSLKIILVTGGADMRSQAIALAQRPHVIIATPGRLADHI-RTSGEDTICGLRRVRY 279
Query: 125 LVLDEADRLLNDDFEKSL----DEILNVIP--RMRQTYLFSATMTKKV---KKLQRACLK 175
+VLDEADRLL+ + S+ +E L+V+P RQT LF+AT+T +V K+L + K
Sbjct: 280 VVLDEADRLLHAGGKGSMLPDVEECLSVLPPATQRQTLLFTATITPEVRALKELPQRPGK 339
Query: 176 NPVKI-EAASKYSTVD-TLKQQYRFVPAKYKDCYL-VYILTEVSASST-MVFTRTCDATR 231
PV + E ++ + TL Q++ +P +K+ YL V++LTE + + T ++F
Sbjct: 340 PPVFVCEVDTQMLAIPATLSQKHVQIPVTHKEHYLHVFLLTEANVNKTVIIFCNRTTTAE 399
Query: 232 LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVIN 291
L +LR L R + + Q +R L +F+A IL+ TDVA+RGLDI V +VIN
Sbjct: 400 YLHHLLRLLDHRVTSLHSKLPQRQRTDNLARFRASAARILVATDVAARGLDIQEVSLVIN 459
Query: 292 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 351
YD+P + DYIHRVGRTARAGR G A++LV Q ++E L IE+ +G+K+ + EEE V
Sbjct: 460 YDVPRDPDDYIHRVGRTARAGRKGEAVTLVGQRDVELVLAIEERVGRKMEAW--EEEGVN 517
Query: 352 L-------LLERVTEAKRISQMTIKDS---GNKRRR 377
L L+ V+E KR + + +++ G KR++
Sbjct: 518 LETRVIRDALKVVSEKKREALLEMEEGREVGGKRKK 553
>gi|451852848|gb|EMD66142.1| hypothetical protein COCSADRAFT_179496 [Cochliobolus sativus
ND90Pr]
Length = 814
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 136/318 (42%), Positives = 192/318 (60%), Gaps = 6/318 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A+TGSGKT AF +PIL+ LL Q+ +P + PTRELA+Q
Sbjct: 325 GKDVVGGAETGSGKTAAFLIPILERLLY---RQKKIPTTRVAIFMPTRELAVQCFNVATK 381
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L S + A++ GG +Q L RP +V+ATPGR +DH+ NT F + L+ LVLD
Sbjct: 382 LASFTDITFALMAGGFSSREQEAVLKTRPDVVIATPGRFIDHMHNTAAFQVENLEILVLD 441
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L + FE L+EIL IP+ RQT LFSATMT V KL R + PV++ +K T
Sbjct: 442 EADRMLEEGFESQLNEILTTIPKSRQTMLFSATMTSSVDKLIRIGMDKPVRLMVDAKKQT 501
Query: 189 VDTLKQQYRFVPAKYKD---CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
V L Q++ + +D YL+YI ++ +VF R + ++ G +A
Sbjct: 502 VKGLTQEFVRLRQGKEDKRLAYLMYICEKIYTEKVIVFFRQKKEAHRVRVVFALCGLKAS 561
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G+MSQ +R+ A+ F++G+ + L+ TDVASRGLDI +V VINY+ P + Y+HRV
Sbjct: 562 ELHGNMSQEQRIQAVEAFRSGKSSYLLATDVASRGLDIKNVSTVINYEAPQTHEIYLHRV 621
Query: 306 GRTARAGRTGVAISLVNQ 323
GRTARAGR+G A +L +
Sbjct: 622 GRTARAGRSGRACTLAAE 639
>gi|83720702|ref|YP_441535.1| ATP-dependent RNA helicase RhlE [Burkholderia thailandensis E264]
gi|83654527|gb|ABC38590.1| ATP-dependent RNA helicase RhlE [Burkholderia thailandensis E264]
Length = 571
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 203/336 (60%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
+G+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 137 SGRDVMGAAQTGTGKTASFSLPIIQRLLPQA-NTSASPARHPVRALILTPTRELADQVAA 195
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A LR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 196 NVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 254
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 255 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVAR 314
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
+ T+ Q V K +V ++ + S +VF + LA + G A
Sbjct: 315 SNAAASTVTQIVYDVAEGDKQAAVVKLIRDRSLKQVIVFCNSKIGASRLARQIERDGIVA 374
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQS+R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 375 AAIHGDRSQSERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 434
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG +G A+SL + E + IEKLI + L
Sbjct: 435 IGRTGRAGASGDALSLCSPNERKQLADIEKLIKRTL 470
>gi|71405341|ref|XP_805297.1| ATP-dependent RNA helicase [Trypanosoma cruzi strain CL Brener]
gi|70868651|gb|EAN83446.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi]
Length = 507
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 153/401 (38%), Positives = 237/401 (59%), Gaps = 40/401 (9%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGK ++G A TGSGKT AFALP+LQ L E + FA VL+P+RELA QI +QF
Sbjct: 38 AGKCVVGGAATGSGKTAAFALPVLQILAE------DLYGVFALVLTPSRELAYQIVDQFV 91
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRL---MDHLTNTKGFSLGTLKY 124
ALG+ + +R A+++GG+ QQ AL RPH+VVATPGRL ++ + L L++
Sbjct: 92 ALGAPLHIRTAIIIGGLPHEQQLDALKARPHVVVATPGRLKFMLEKFPEARKAFLH-LRF 150
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRM---RQTYLFSATMTKKVKKLQRACLKNPVKIE 181
LVLDEADRL +DD E ++E++ ++P R+ LF+AT+ +++ +++ + I
Sbjct: 151 LVLDEADRLTSDDIETDVEEVVRLLPPARPERRVLLFTATLEQRLTRVEEGGWLVRLGIT 210
Query: 182 AASK-----------------------YSTVDTLKQQYRFVPAKYKDCYLV-YILTEVSA 217
A++ Y+ D+LKQ+Y F+P K YLV I +
Sbjct: 211 PAAQNLEVFATNTVTTVADDNGATTESYAVADSLKQRYLFIPNMVKLAYLVASIRAAGTE 270
Query: 218 SSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVA 277
ST+VFT +C ++ L L+ LG ++ +SQ R+ L FK G IL+ TD+A
Sbjct: 271 QSTIVFTNSCMRCEVVRLTLQLLGFPVCSLNSVISQKHRVDNLATFKLGIARILVATDIA 330
Query: 278 SRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIG 337
SRGLDIP+V +V++YD+P Y+HRVGRTARAGR G++++ V +Y++ ++E+ +
Sbjct: 331 SRGLDIPAVGLVLHYDLPKQVSTYLHRVGRTARAGREGLSVAFVTEYDVNLVRRLERKMD 390
Query: 338 KKLPEFPAE---EEEVLLLLERVTEAKRISQMTIKDSGNKR 375
+ + A+ E+EVL LL+ V+ AK +++ ++D +R
Sbjct: 391 CTMTLWKAKGVNEKEVLKLLDEVSAAKVQAKIQVEDQFGRR 431
>gi|91782534|ref|YP_557740.1| ATP-dependent RNA helicase 2 [Burkholderia xenovorans LB400]
gi|91686488|gb|ABE29688.1| Putative ATP-dependent RNA helicase 2 [Burkholderia xenovorans
LB400]
Length = 491
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 146/336 (43%), Positives = 206/336 (61%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT +F+LPI+Q LL A + PA A +L+PTRELA Q++
Sbjct: 47 AGRDMMGAAQTGTGKTASFSLPIIQRLLPQASTSAS-PARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
+A +LR AV+ GGVDM Q+ L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVQAYAKHTALRSAVVFGGVDMNPQSEQLRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L++P IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSGEIKKLAATYLRDPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
ST ++Q V K +V ++ E +VF + L+ L G A
Sbjct: 225 SNSTATNVRQIVYEVAEGDKTGAVVQLIRERGLKQVIVFCNSKIGASRLSRSLERDGVIA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQ++R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 TAIHGDRSQNERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG +G A+SL + E + IEKLI + L
Sbjct: 345 IGRTGRAGASGDALSLCSPNERKQLADIEKLIKRPL 380
>gi|389873083|ref|YP_006380502.1| ATP-dependent RNA helicase [Advenella kashmirensis WT001]
gi|388538332|gb|AFK63520.1| ATP-dependent RNA helicase [Advenella kashmirensis WT001]
Length = 476
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 144/336 (42%), Positives = 202/336 (60%), Gaps = 5/336 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AF LP+L L+ +A N PA A +L+PTRELA Q++E
Sbjct: 53 GRDIMGAAQTGTGKTAAFTLPLLHRLMPMA-NSSMSPARHPVRALILAPTRELADQVAES 111
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+ LR AV+ GGVDM Q L K +++ATPGRL+DH+ K SL + L
Sbjct: 112 VKRYSHSSPLRVAVVFGGVDMNAQRDQLRKGCELLIATPGRLLDHIEQ-KNVSLSQVSVL 170
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F L+ I+ ++P+ RQ+ LFSAT + ++KL R+ L NPV+I A +
Sbjct: 171 VLDEADRMLDMGFLPDLERIVRLLPKPRQSLLFSATFSNDIRKLARSFLNNPVEINVAPR 230
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T +T+ Q V K ++Y L + S +VF T +A L + G A
Sbjct: 231 NATAETVTQIAYPVAPNEKKAAVLYTLKSRNLSQVIVFVNTKIGASRVARELVSEGINAE 290
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G SQ++R+ AL FK+GE +L+ TDVA+RGLD+ + VIN D+P N++DY+HR+
Sbjct: 291 SIHGDRSQAERIKALEGFKSGEIAVLVATDVAARGLDVVGLPCVINMDLPYNAEDYVHRI 350
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
GRT RAG G AI+ Q E IEKLI +P
Sbjct: 351 GRTGRAGAKGEAIAFYTQTEERLLEDIEKLIKTPVP 386
>gi|358370127|dbj|GAA86739.1| ATP-dependent RNA helicase [Aspergillus kawachii IFO 4308]
Length = 832
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 138/318 (43%), Positives = 193/318 (60%), Gaps = 6/318 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKT AF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 351 GKDIVGSAVTGSGKTAAFVVPILERLLF---RPRKVPTSRVAILMPTRELAVQCYNVATK 407
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + LVGG + +Q L KRP +++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 408 LATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLD 467
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EIL IP+ RQT LFSATMT V KL R L PV++ +K +T
Sbjct: 468 EADRMLEDGFADELNEILTTIPKSRQTMLFSATMTDTVDKLIRVGLNRPVRLMVDAKKNT 527
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
TL Q++ R P + YL+Y+ E+ +VF R + ++ LG +A
Sbjct: 528 AVTLVQEFVRLRPGREDKRLGYLLYLCKELYTGRVIVFFRQKKEAHRVRIIFGLLGLKAA 587
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ ++ F+ G+ L+ TD+ASRGLDI V+ VINY+ P + + Y+HRV
Sbjct: 588 ELHGSMSQEQRIKSVENFREGKAAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRV 647
Query: 306 GRTARAGRTGVAISLVNQ 323
GRTARAGR+G A ++ +
Sbjct: 648 GRTARAGRSGRACTIAAE 665
>gi|170701603|ref|ZP_02892549.1| DEAD/DEAH box helicase domain protein [Burkholderia ambifaria
IOP40-10]
gi|170133486|gb|EDT01868.1| DEAD/DEAH box helicase domain protein [Burkholderia ambifaria
IOP40-10]
Length = 571
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 163/398 (40%), Positives = 224/398 (56%), Gaps = 13/398 (3%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT +F+LPI+Q LL A + PA A +L+PTRELA Q++
Sbjct: 121 AGRDVMGAAQTGTGKTASFSLPIIQRLLPQASTSAS-PARHPVRALILTPTRELADQVAA 179
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A SLR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 180 NVHAYAKHTSLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 238
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 239 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVAR 298
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
ST + Q V K +V +L + +VF + LA L G A
Sbjct: 299 SNSTNANVTQIVYDVAEGDKHSAVVQLLRDRGLKQVIVFCNSKIGASRLARNLERDGVVA 358
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQ +R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 359 SAIHGDKSQLERMQALDAFKRGEIEALVATDVAARGLDIVELPAVINFDLPFNAEDYVHR 418
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLL--LERVTEAKR 362
+GRT RAG TG A+SL + E + IEKLI + L E + L L R +R
Sbjct: 419 IGRTGRAGATGDALSLCSPNERKQLADIEKLIKRPL------EVQTLALDKPSRHRHDER 472
Query: 363 ISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKKLSKR 400
+ + SG + +GG + D R + S+R
Sbjct: 473 GGERAGERSGERAGERGGRRERDEHRGASARRSGGSER 510
>gi|452988487|gb|EME88242.1| hypothetical protein MYCFIDRAFT_159470 [Pseudocercospora fijiensis
CIRAD86]
Length = 467
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 212/355 (59%), Gaps = 23/355 (6%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D IG ++TGSGKT AFALPIL + F VL+PTRELA+QI EQF+
Sbjct: 73 AGRDCIGGSRTGSGKTIAFALPILHKW------AKEPSGIFGLVLTPTRELALQIFEQFQ 126
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---Y 124
A+G LRC ++ GG DM Q + L KRPH+V+ATPGRL DH+ + ++ LK +
Sbjct: 127 AIGGSQGLRCVLVTGGADMRAQAIELSKRPHVVIATPGRLADHVETSGEDTIHGLKKCRF 186
Query: 125 LVLDEADRLL---NDDFEKSLDEILNVIPRM--RQTYLFSATMTKKVKKLQ---RACLKN 176
+VLDEADRLL +++ L+ +P RQT LF+AT+T +V+ L+ R K
Sbjct: 187 VVLDEADRLLASGKGSMLPAVETCLDALPSAAKRQTCLFTATVTPEVRALKERPRENGKP 246
Query: 177 PVKIEAAS--KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSAS---STMVFTRTCDATR 231
PV + + TL Q Y+ V +K+ YL ++L A+ +T+VF +
Sbjct: 247 PVFVCEVDIDSLAIPPTLTQNYQLVNVLHKEKYL-HVLLGTPANVEKTTIVFCNRTETAN 305
Query: 232 LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVIN 291
LL +LR+L R + + R+ L +F+A IL+ TDVASRGLDIP V +VIN
Sbjct: 306 LLEYLLRSLEHRVTALHSGLDHQDRVNNLARFRARAARILVATDVASRGLDIPDVSLVIN 365
Query: 292 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAE 346
YD+P N DYIHRVGRTARAGR G+AISLV Q +++ IE +G++L E+ E
Sbjct: 366 YDLPRNPDDYIHRVGRTARAGRKGMAISLVGQRDVDVVHAIEARVGRELAEYKEE 420
>gi|70996226|ref|XP_752868.1| ATP-dependent RNA helicase (Drs1) [Aspergillus fumigatus Af293]
gi|74672247|sp|Q4WRV2.1|DRS1_ASPFU RecName: Full=ATP-dependent RNA helicase drs1
gi|66850503|gb|EAL90830.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus fumigatus
Af293]
gi|159131623|gb|EDP56736.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus fumigatus
A1163]
Length = 830
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 138/316 (43%), Positives = 191/316 (60%), Gaps = 6/316 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKT AF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 347 GKDIVGSAVTGSGKTAAFVVPILERLLF---RPRKVPTSRVAILMPTRELAVQCYNVATK 403
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + LVGG + +Q L KRP +++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 404 LATHTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSPSFTVDTLEILVLD 463
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EIL IP+ RQT LFSATMT V KL R L PV++ SK +T
Sbjct: 464 EADRMLEDGFADELNEILTTIPKSRQTMLFSATMTDSVDKLIRVGLNRPVRLMVDSKKNT 523
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
L Q++ R P + YL+Y+ E+ +VF R + ++ LG +A
Sbjct: 524 SMNLTQEFVRLRPGREDKRLGYLLYLCNEIYTGRVIVFFRQKREAHRVRIVFGLLGLKAA 583
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ ++ F+ G+ L+ TD+ASRGLDI V+ VINY+ P + + Y+HRV
Sbjct: 584 ELHGSMSQEQRIKSVENFREGKVAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRV 643
Query: 306 GRTARAGRTGVAISLV 321
GRTARAGR+G A ++
Sbjct: 644 GRTARAGRSGRACTIA 659
>gi|315499118|ref|YP_004087922.1| dead/deah box helicase domain-containing protein [Asticcacaulis
excentricus CB 48]
gi|315417130|gb|ADU13771.1| DEAD/DEAH box helicase domain protein [Asticcacaulis excentricus CB
48]
Length = 605
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 141/348 (40%), Positives = 212/348 (60%), Gaps = 8/348 (2%)
Query: 11 DLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFAC---VLSPTRELAIQISEQFE 67
DL+G+AQTG+GKT AFALPIL +L + R +PA +C VLSPTRELA QI++ F+
Sbjct: 41 DLLGIAQTGTGKTAAFALPILHHIL----SNRIIPAPRSCRVLVLSPTRELATQIADSFK 96
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
A G+ L+ A + GGV Q AL I+VATPGRL+DH+ K L +++LVL
Sbjct: 97 AYSKGLGLQIATIFGGVKYGPQYKALQGGIDILVATPGRLIDHIEQ-KTIDLKAVEHLVL 155
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEAD++L+ F K + ++ + +P RQ FSATM K++ L L NP K+E + +
Sbjct: 156 DEADQMLDMGFIKPIRQVASRLPAQRQNLFFSATMPKEIAGLANELLTNPKKVEITPEAT 215
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
T + + QQ F+ + K L + + + T++FTRT +A L+ G A I
Sbjct: 216 TAERVTQQVIFIEQQRKRALLSELYADEKLARTLIFTRTKRGADRVAAYLQAGGVEAAAI 275
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +QS+R AL FKAG L+ TD+A+RG+D+ +V VINY++P ++ Y+HR+GR
Sbjct: 276 HGDKNQSQRERALQAFKAGRVRALVATDIAARGIDVDNVTHVINYELPFVAEAYVHRIGR 335
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLE 355
TARAG+ G +I+LV E + IE++ +++P + +++ L LL+
Sbjct: 336 TARAGKEGHSITLVADDERKLLKDIERITRQRIPSWDRRKDQALKLLD 383
>gi|261189897|ref|XP_002621359.1| 2-isopropylmalate synthase [Ajellomyces dermatitidis SLH14081]
gi|239591595|gb|EEQ74176.1| 2-isopropylmalate synthase [Ajellomyces dermatitidis SLH14081]
Length = 834
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 138/318 (43%), Positives = 193/318 (60%), Gaps = 6/318 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKTGAF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 348 GKDVVGGAVTGSGKTGAFIIPILERLLY---RPRKVPTSRVAILMPTRELAVQCYNVATK 404
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + LVGG + +Q L KRP +++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 405 LATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLD 464
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EIL IP+ RQT LFSATMT V KL R L PV++ +K T
Sbjct: 465 EADRMLEDGFADELNEILTTIPKSRQTMLFSATMTNNVDKLIRVGLNRPVRLMVDAKKQT 524
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
V TL Q++ R P + YL+ + + ++F R + ++ +G +A
Sbjct: 525 VGTLVQEFVRLRPGREDKRLGYLMVLCKTIYKDRVIIFFRAKKEAHRVRIIFGLMGLKAA 584
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ ++ F+ G+ + L+ TDVASRGLDI V+ VINY+ P + + Y+HRV
Sbjct: 585 ELHGSMSQEQRIKSVESFRDGKVSFLLATDVASRGLDIKGVETVINYEAPQSHEIYLHRV 644
Query: 306 GRTARAGRTGVAISLVNQ 323
GRTARAGR+G A +L +
Sbjct: 645 GRTARAGRSGRACTLAAE 662
>gi|238028205|ref|YP_002912436.1| ATP-dependent RNA helicase 2 [Burkholderia glumae BGR1]
gi|237877399|gb|ACR29732.1| Putative ATP-dependent RNA helicase 2 [Burkholderia glumae BGR1]
Length = 480
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 145/340 (42%), Positives = 205/340 (60%), Gaps = 5/340 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
+G+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 47 SGRDVMGAAQTGTGKTASFSLPIIQRLLPQA-NTSASPARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
+ +LR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVHSYAKHTALRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQM 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L NP IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKARQTLLFSATFSPEIKKLAATYLTNPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
+T + Q + K +V ++ + + +VF + LA +L G A
Sbjct: 225 SNATATNVTQIVYDIAEGDKQAAVVKLIRDRALKQVIVFCNSKIGASRLARLLERDGVVA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQ++R+ AL FK GE L+ TDVA+RGLDI + VIN+D+P +++DY+HR
Sbjct: 285 TAIHGDRSQNERMQALEAFKRGEVEALVATDVAARGLDIAELPAVINFDLPFSAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFP 344
+GRT RAG +G A+SL + E + IEKLI + LP P
Sbjct: 345 IGRTGRAGASGDALSLCSPNERKQLADIEKLIKRDLPLQP 384
>gi|115352406|ref|YP_774245.1| DEAD/DEAH box helicase [Burkholderia ambifaria AMMD]
gi|115282394|gb|ABI87911.1| DEAD/DEAH box helicase domain protein [Burkholderia ambifaria AMMD]
Length = 497
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 150/336 (44%), Positives = 202/336 (60%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT +F+LPI+Q LL A + PA A +L+PTRELA Q++
Sbjct: 47 AGRDVMGAAQTGTGKTASFSLPIIQRLLPQASTSAS-PARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A SLR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVHAYAKHTSLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
ST + Q V K +V +L + +VF + LA L G A
Sbjct: 225 SNSTNANVTQIVYDVAEGDKHGAVVQLLRDRGLKQVLVFCNSKIGASRLARNLERDGVVA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQ +R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 SAIHGDKSQLERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG TG A+SL + E + IEKLI + L
Sbjct: 345 IGRTGRAGATGDALSLCSPNERKQLADIEKLIKRPL 380
>gi|443316249|ref|ZP_21045701.1| DNA/RNA helicase, superfamily II [Leptolyngbya sp. PCC 6406]
gi|442784157|gb|ELR94045.1| DNA/RNA helicase, superfamily II [Leptolyngbya sp. PCC 6406]
Length = 438
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 140/334 (41%), Positives = 197/334 (58%), Gaps = 2/334 (0%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKDL+ AQTG+GKT F LPIL L Q P A VL+PTRELA Q++E
Sbjct: 38 GKDLMASAQTGTGKTAGFTLPILHKLASAGRGQGRRPPR-ALVLTPTRELAAQVAESIAT 96
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G + LR AV+ GGV + Q L + ++VATPGRL+DH+ + L ++ LVLD
Sbjct: 97 YGKYVPLRTAVVFGGVKIQPQIHKLQRGVDVLVATPGRLLDHV-GQRTVDLSQVEVLVLD 155
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F + +LN +P RQT +FSAT + ++KKL L++PV +E A++ ST
Sbjct: 156 EADRMLDMGFIHDIRRLLNELPAERQTLMFSATFSNEIKKLADDILRDPVLVEVAARNST 215
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
D + Q V + K L Y++ + + +VFTRT LA L G + I
Sbjct: 216 ADKISQVVHPVDRQRKRELLSYMIGQHNWQQVLVFTRTKHGANRLAEQLERDGLKTAAIH 275
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ R AL FK G +L+ TD+A+RGLDI + V+N+++P S+DY+HR+GRT
Sbjct: 276 GNKSQGARTRALQDFKKGAVRVLVATDIAARGLDIDHLPHVVNFELPNVSEDYVHRIGRT 335
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPE 342
RAG TG A+SLV+ E IE+L+ + LP+
Sbjct: 336 GRAGNTGQAVSLVSSEEYPLLRSIERLLKQDLPK 369
>gi|315043240|ref|XP_003170996.1| ATP-dependent RNA helicase drs1 [Arthroderma gypseum CBS 118893]
gi|311344785|gb|EFR03988.1| ATP-dependent RNA helicase drs1 [Arthroderma gypseum CBS 118893]
Length = 814
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 138/316 (43%), Positives = 194/316 (61%), Gaps = 6/316 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKTGAF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 336 GKDVVGGAVTGSGKTGAFIVPILERLLY---RPRKVPTSRVAILMPTRELAVQCYNVATK 392
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + LVGG + +Q L KRP +++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 393 LATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLD 452
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F + L+EIL IP+ RQT LFSATMT V KL R L PV++ SK T
Sbjct: 453 EADRMLEDGFAEELNEILTTIPKSRQTMLFSATMTNSVDKLIRVGLNKPVRLMVDSKKQT 512
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
V TL Q++ R P + YL+++ V + +VF R + ++ +G +A
Sbjct: 513 VGTLVQEFVRLRPGREDKRLGYLMFLCKTVYTNRVIVFFRQKKEAHRVRIIFGLMGLKAA 572
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ ++ F+ + + L+ TD+ASRGLDI V+ VINY+ P + + Y+HRV
Sbjct: 573 ELHGSMSQEQRIKSVEDFRDAKVSYLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRV 632
Query: 306 GRTARAGRTGVAISLV 321
GRTARAGR+G A ++
Sbjct: 633 GRTARAGRSGRACTIA 648
>gi|224369411|ref|YP_002603575.1| protein RhlE2 [Desulfobacterium autotrophicum HRM2]
gi|223692128|gb|ACN15411.1| RhlE2 [Desulfobacterium autotrophicum HRM2]
Length = 460
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 137/333 (41%), Positives = 205/333 (61%), Gaps = 3/333 (0%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D++ AQTG+GKT AFALPI++ +L + R P A VL+PTRELA+Q+ E +A
Sbjct: 38 GQDILARAQTGTGKTDAFALPIVE-ILARGKAHRRHPR--ALVLTPTRELALQVGESIKA 94
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+SLRC V+ GGV++ Q L + I+VATPGRL+D + L +++LV D
Sbjct: 95 YARRVSLRCTVVYGGVNVNPQIDRLKRGVDILVATPGRLLDLAAFNRDVKLSKIEFLVFD 154
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F + +IL ++P+ R+T LFSAT T++++ L LK P +IE +
Sbjct: 155 EADRMLDLGFSDEISQILELVPQDRRTMLFSATYTRQIRDLADKMLKTPEQIEVTPNTTV 214
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
+++ Q+ V K L++++T +VFTRT LA L + A +
Sbjct: 215 AESIVQKVHLVEKSNKRELLIHLITRSDWRQVLVFTRTKHGANKLAERLAQVKISAAALH 274
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQS R L +FK GE IL+ TDVA+RGLDI + V+NYD+P+ ++DY+HR+GRT
Sbjct: 275 GNKSQSFRTRTLQEFKNGEIRILVATDVAARGLDITGLPHVVNYDMPSVAEDYVHRIGRT 334
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
RAG GVA+SLV++ E + +E L+ +K+P
Sbjct: 335 GRAGIQGVAVSLVSKEEKVFLKSVESLLEQKIP 367
>gi|156064101|ref|XP_001597972.1| hypothetical protein SS1G_00058 [Sclerotinia sclerotiorum 1980]
gi|160380631|sp|A7E436.1|DBP8_SCLS1 RecName: Full=ATP-dependent RNA helicase dbp8
gi|154690920|gb|EDN90658.1| hypothetical protein SS1G_00058 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 540
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 163/394 (41%), Positives = 236/394 (59%), Gaps = 32/394 (8%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA+PILQ E FA VL+PTRELA+QI EQF+A
Sbjct: 148 GRDCIGGSRTGSGKTVAFAVPILQKWAEDPF------GIFALVLTPTRELALQIYEQFKA 201
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKY 124
+ S SL+ ++ GG DM Q AL +RPH+V+ATPGRL DH+ T G +L ++
Sbjct: 202 ISSPQSLKAVLITGGSDMRPQATALAQRPHVVIATPGRLADHI-RTSGEDTVCALRRVRM 260
Query: 125 LVLDEADRLLNDDFEKSL----DEILNVIP--RMRQTYLFSATMTKKVKKLQ---RACLK 175
+VLDEADRLL S+ +E L+++P RQT LF+AT+T +V+ L+ R K
Sbjct: 261 VVLDEADRLLASGSVGSMLPDVEECLSLLPPPSERQTLLFTATVTPEVRALKDMPRTLGK 320
Query: 176 NPVKI-EAASKYSTV-DTLKQQYRFVPAKYKDCYL-VYILTEVS-ASSTMVFTRTCDATR 231
PV + E ++ + +L Q + VP +++ YL +++LTE + S ++F
Sbjct: 321 PPVFVCEVDTQALAIPSSLNQMHLQVPVTHREHYLHMFLLTEKNLPKSIVIFCNRTATAD 380
Query: 232 LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVIN 291
L +LR L R + + Q +R+ L +F+A IL+ TDVA+RGLDIP V +VIN
Sbjct: 381 YLTHLLRLLEHRVTALHSKLPQRQRIDNLGRFRASAARILVATDVAARGLDIPEVGLVIN 440
Query: 292 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAE----E 347
YD+P + DYIHRVGRTARAGR G A++ V Q +++ L IEK +G+++ + E E
Sbjct: 441 YDVPRDPDDYIHRVGRTARAGRKGEAVTFVGQRDVQLILAIEKRVGRQMEAWTEEGVNLE 500
Query: 348 EEVLL-LLERVTEAKRISQMTIKDS---GNKRRR 377
V+ L+ V E KR + + I++ G KR+R
Sbjct: 501 TRVIRESLKLVGEKKREAMLEIEEGREVGGKRKR 534
>gi|302499800|ref|XP_003011895.1| hypothetical protein ARB_01875 [Arthroderma benhamiae CBS 112371]
gi|291175449|gb|EFE31255.1| hypothetical protein ARB_01875 [Arthroderma benhamiae CBS 112371]
Length = 814
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 138/316 (43%), Positives = 194/316 (61%), Gaps = 6/316 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKTGAF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 334 GKDVVGGAVTGSGKTGAFIVPILERLLY---RPRKVPTSRVAILMPTRELAVQCYNVATK 390
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + LVGG + +Q L KRP +++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 391 LATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLD 450
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F + L+EIL IP+ RQT LFSATMT V KL R L PV++ SK T
Sbjct: 451 EADRMLEDGFAEELNEILTTIPKSRQTMLFSATMTNSVDKLIRVGLNKPVRLMVDSKKQT 510
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
V TL Q++ R P + YL+++ V + +VF R + ++ +G +A
Sbjct: 511 VGTLVQEFVRLRPGREDKRLGYLMFLCKTVYTNRVIVFFRQKKEAHRVRIIFGLMGLKAA 570
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ ++ F+ + + L+ TD+ASRGLDI V+ VINY+ P + + Y+HRV
Sbjct: 571 ELHGSMSQEQRIKSVEDFRDAKVSYLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRV 630
Query: 306 GRTARAGRTGVAISLV 321
GRTARAGR+G A ++
Sbjct: 631 GRTARAGRSGRACTIA 646
>gi|172061278|ref|YP_001808930.1| DEAD/DEAH box helicase [Burkholderia ambifaria MC40-6]
gi|171993795|gb|ACB64714.1| DEAD/DEAH box helicase domain protein [Burkholderia ambifaria
MC40-6]
Length = 511
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 150/336 (44%), Positives = 202/336 (60%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT +F+LPI+Q LL A + PA A +L+PTRELA Q++
Sbjct: 69 AGRDVMGAAQTGTGKTASFSLPIIQRLLPQASTSAS-PARHPVRALILTPTRELADQVAA 127
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A SLR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 128 NVHAYAKHTSLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 186
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 187 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVAR 246
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
ST + Q V K +V +L + +VF + LA L G A
Sbjct: 247 SNSTNANVTQIVYDVAEGDKHGAVVQLLRDRGLKQVLVFCNSKIGASRLARNLERDGVVA 306
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQ +R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 307 SAIHGDKSQLERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 366
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG TG A+SL + E + IEKLI + L
Sbjct: 367 IGRTGRAGATGDALSLCSPNERKQLADIEKLIKRPL 402
>gi|194224511|ref|XP_001501169.2| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Equus
caballus]
Length = 724
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 140/329 (42%), Positives = 198/329 (60%), Gaps = 6/329 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+ A TG+GKT AFALP+L+ L+ R P VL PTREL IQ+ +
Sbjct: 273 GKDICACAATGTGKTAAFALPVLERLIY---KPRQAPVTRVLVLVPTRELGIQVHSVTKQ 329
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L S+ + VGG+D+ Q AL P I++ATPGRL+DHL N F L +++ L+LD
Sbjct: 330 LAQFCSITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILD 389
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L++ FE+ + EI+ + RQT LFSATMT +VK L LKNPV+I S
Sbjct: 390 EADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDV 449
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
L+Q++ R P + D + +LT M+FT+T + ++L +G +
Sbjct: 450 APFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVG 509
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G++SQ++RL AL +FK + +IL+ TDVA+RGLDI V VIN+ +P K Y+HRV
Sbjct: 510 ELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRV 569
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEK 334
GRTARAGR G ++SLV + E + +I K
Sbjct: 570 GRTARAGRAGRSVSLVGEEERKMLKEIVK 598
>gi|427400760|ref|ZP_18891998.1| hypothetical protein HMPREF9710_01594 [Massilia timonae CCUG 45783]
gi|425720273|gb|EKU83196.1| hypothetical protein HMPREF9710_01594 [Massilia timonae CCUG 45783]
Length = 523
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 138/331 (41%), Positives = 201/331 (60%), Gaps = 5/331 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT +F+LPILQ L+ A N PA A VL PTRELA+Q+++
Sbjct: 77 GRDVMGAAQTGTGKTASFSLPILQLLMPHA-NASMSPARHPVRALVLVPTRELAVQVADN 135
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
+A LR V+ GG+DM QT L + IV+ATPGRL+DH+ K SLG ++ L
Sbjct: 136 VKAYARHTPLRATVVFGGMDMKPQTEILRRGVEIVIATPGRLLDHIEQ-KNVSLGQVQML 194
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
V+DEADR+L+ F L I+N++P+ RQ +FSAT + ++KKL L NP+ IE A
Sbjct: 195 VMDEADRMLDMGFLPDLQRIINLLPKQRQNLMFSATFSPEIKKLANTFLNNPLTIEVARS 254
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T + + Q V + K + +++ ++F+ T L+ L G +A
Sbjct: 255 NATAEKVTQIVYKVDEEQKRDVVEHLIRSRDMKQVIIFSNTKIGASRLSSHLEKRGVKAS 314
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G +Q +R+ AL+ FK G +L+ TDVA+RGLDI + VINYD+P N++DY+HR+
Sbjct: 315 AIHGDKTQQERMAALDAFKNGSVEVLVATDVAARGLDISDLPAVINYDLPYNAEDYVHRI 374
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLI 336
GRT RAG +G A+S+ + + IEKLI
Sbjct: 375 GRTGRAGASGDALSVYSDKDERLLADIEKLI 405
>gi|425055862|ref|ZP_18459326.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 505]
gi|403033019|gb|EJY44552.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 505]
Length = 503
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 146/345 (42%), Positives = 208/345 (60%), Gaps = 13/345 (3%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKD+IG AQTG+GKT AF LP+L+ +I ++ + V++PTRELAIQ E+
Sbjct: 37 AGKDVIGQAQTGTGKTAAFGLPMLE---KIDPDRHELQGL---VIAPTRELAIQTQEELY 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
LG +R + GG D+ +Q L RPHIVV TPGR++DH+ N LGT++ LVL
Sbjct: 91 RLGRDKKVRVQAVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHI-NRHTLKLGTVQTLVL 149
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEAD +LN F + +++I++ +P RQT LFSATM +K + +K+P ++ +K
Sbjct: 150 DEADEMLNMGFLEDIEKIISQVPDQRQTLLFSATMPPAIKNIGVKFMKSPHHVKIKAKEM 209
Query: 188 TVDTLKQQYRFVPAK-YKDCYLVYILTEVSASS-TMVFTRTCDATRLLALMLRNLGQRAI 245
T D + Q Y V AK Y+ ++ L +V T+VF RT LA L G RA
Sbjct: 210 TADLIDQYY--VRAKEYEKFDIMTRLFDVQTPELTIVFGRTKRRVDELARGLEARGYRAE 267
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G +SQ KR+ L FK+G +IL+ TDVA+RGLDI V V NYDIP + + Y+HR+
Sbjct: 268 GIHGDLSQQKRMSVLRSFKSGHLDILVATDVAARGLDISGVTHVYNYDIPQDPESYVHRI 327
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEF--PAEEE 348
GRT RAG+ G++++ V E+++ IE L K++ P E+E
Sbjct: 328 GRTGRAGKGGMSVTFVTPNEMDYLHVIENLTKKRMTTLRPPTEKE 372
>gi|302654026|ref|XP_003018826.1| hypothetical protein TRV_07145 [Trichophyton verrucosum HKI 0517]
gi|291182505|gb|EFE38181.1| hypothetical protein TRV_07145 [Trichophyton verrucosum HKI 0517]
Length = 814
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 138/316 (43%), Positives = 194/316 (61%), Gaps = 6/316 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKTGAF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 334 GKDVVGGAVTGSGKTGAFIVPILERLLY---RPRKVPTSRVAILMPTRELAVQCYNVATK 390
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + LVGG + +Q L KRP +++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 391 LATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLD 450
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F + L+EIL IP+ RQT LFSATMT V KL R L PV++ SK T
Sbjct: 451 EADRMLEDGFAEELNEILTTIPKSRQTMLFSATMTNSVDKLIRVGLNKPVRLMVDSKKQT 510
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
V TL Q++ R P + YL+++ V + +VF R + ++ +G +A
Sbjct: 511 VGTLVQEFVRLRPGREDKRLGYLMFLCKTVYTNRVIVFFRQKKEAHRVRIVFGLMGLKAA 570
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ ++ F+ + + L+ TD+ASRGLDI V+ VINY+ P + + Y+HRV
Sbjct: 571 ELHGSMSQEQRIKSVEDFRDAKVSYLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRV 630
Query: 306 GRTARAGRTGVAISLV 321
GRTARAGR+G A ++
Sbjct: 631 GRTARAGRSGRACTIA 646
>gi|254473978|ref|ZP_05087371.1| dead/deah box helicase domain protein [Pseudovibrio sp. JE062]
gi|211956867|gb|EEA92074.1| dead/deah box helicase domain protein [Pseudovibrio sp. JE062]
Length = 483
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 141/336 (41%), Positives = 200/336 (59%), Gaps = 8/336 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFAC---VLSPTRELAIQISEQ 65
G+D++G+AQTG+GKT AF LP+L L E R PA C +L+PTRELA QI+E
Sbjct: 39 GEDILGIAQTGTGKTAAFVLPLLTRLAE----DRKKPAPHTCRALILAPTRELASQIAES 94
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
G I AV+ GGV Q AL K IV+ATPGRL DH++ T G L +
Sbjct: 95 VRTYGQFIGPSVAVIFGGVKPGPQLRALSKGLDIVIATPGRLEDHMS-TGGIKLDATTTV 153
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEAD++L+ F ++ IL +P++RQT L SATM +++ L + L NP +I A
Sbjct: 154 VLDEADQMLDLGFAPAIRRILGKLPKVRQTVLLSATMPIQIRNLAKEFLSNPHEISVAPV 213
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
++ + Q RF+ + K L+ IL+E +VFTRT ++ L G +
Sbjct: 214 SRPIEKIDQSVRFLNSSSKRAALLDILSEDDIERAIVFTRTKRGADRVSGHLEKAGLSSA 273
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G+ SQ R +L+ FK G IL+ TD+A+RG+DI V V+NY++P + Y+HR+
Sbjct: 274 AIHGNKSQRNREKSLDGFKNGRIKILVATDIAARGIDIDGVSHVVNYELPNVPEAYVHRI 333
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
GRTARAG++GVA+SL + E + IE+LIG+K+P
Sbjct: 334 GRTARAGKSGVAVSLCDATEQPYLRDIERLIGRKIP 369
>gi|366166253|ref|ZP_09466008.1| DEAD/DEAH box helicase [Acetivibrio cellulolyticus CD2]
Length = 381
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 147/333 (44%), Positives = 202/333 (60%), Gaps = 1/333 (0%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DL+G AQTG+GKT AFA+P+LQ L + N + +L+PTRELAIQI E EA
Sbjct: 38 GRDLLGCAQTGTGKTAAFAIPLLQTLYKERTNLKGQRIVKGLILTPTRELAIQIGESLEA 97
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G ++ AV+ GGV + Q L I+VATPGRL+D L N K ++ LK L+LD
Sbjct: 98 YGRYTGIKHAVIFGGVSQVPQVNKLRSGVDIIVATPGRLLD-LMNQKYINVSCLKMLILD 156
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F + +I++ + RQT LFSATM K++ K+ A LKNPVK+E ST
Sbjct: 157 EADRMLDMGFSFDVKKIISRLTDTRQTLLFSATMPKEITKMVDAILKNPVKVEVTPVSST 216
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDT++Q FV K K L+ +L + S +VFTRT +A L L A I
Sbjct: 217 VDTIEQNVYFVEQKDKKSLLIKLLKNRAIESVLVFTRTKHGADKIAKDLAKLSITAQAIH 276
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G SQ R ALN FK +L+ TD+A+RG+DI + +IN+D+P + Y+HR+GRT
Sbjct: 277 GDKSQVARQIALNNFKLKRTRVLVATDIAARGIDIQELSHIINFDLPNVPETYVHRIGRT 336
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
RAG G A+S ++ E+ + I+KLI KK+P
Sbjct: 337 GRAGMVGTALSFCDREEMGYLRAIQKLISKKIP 369
>gi|298207628|ref|YP_003715807.1| ATP-dependent RNA helicase [Croceibacter atlanticus HTCC2559]
gi|83850264|gb|EAP88132.1| putative ATP-dependent RNA helicase [Croceibacter atlanticus
HTCC2559]
Length = 424
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 152/389 (39%), Positives = 224/389 (57%), Gaps = 22/389 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D++G AQTG+GKTGAFA+PI+Q L EN + + +++PTRELAIQI E F A
Sbjct: 38 GEDVLGSAQTGTGKTGAFAIPIIQHLANDLENAKGKRKILSLIVTPTRELAIQIGENFSA 97
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G SL+ V+ GGV QT L +++ATPGRL+D L + SL +KY VLD
Sbjct: 98 YGKYTSLKSTVIFGGVPQRAQTNKLKSGVDVLIATPGRLLD-LMDQGYISLKDVKYFVLD 156
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F + ++L +P+ RQ+ FSATM K + L LKNP K+E ST
Sbjct: 157 EADRMLDMGFIHDIKKLLTKLPKNRQSLFFSATMPKNILTLSNQILKNPKKVEVNPVSST 216
Query: 189 VDTLKQQYRFVPAKY-KDCYLVYILTEVSASSTMVFTRT-CDATRLLALMLRNLGQRAIP 246
+T+ QQY + K K L++IL + +VF++T A R + +L+ + A
Sbjct: 217 AETI-QQYLYTTNKTNKGDLLLHILEDPKIDQVLVFSKTKHGADRTVRKLLKKKIKSA-A 274
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
I G+ SQ++R AL FK G +++ TD+A+RG+DI ++ VINYDIP + Y+HR+G
Sbjct: 275 IHGNKSQNQRQKALKAFKDGNIRVMVATDIAARGIDIDKLEYVINYDIPNEPETYVHRIG 334
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP-----EFP------------AEEEE 349
R RAG G+AIS+ E+++ IEKLI +K+ FP A E+E
Sbjct: 335 RCGRAGEDGIAISIGEPEEIQFIKDIEKLIKQKITVIKDNPFPQTDKPMTTSEKKAAEKE 394
Query: 350 VLLLLERVTEAKRISQMTIKDSGNKRRRK 378
+ + ++ ++ + K GN RR+K
Sbjct: 395 KQRIKQEFFANRKKNKGSQKGGGNNRRKK 423
>gi|154298930|ref|XP_001549886.1| hypothetical protein BC1G_11712 [Botryotinia fuckeliana B05.10]
gi|160380630|sp|A6SFV4.1|DBP8_BOTFB RecName: Full=ATP-dependent RNA helicase dbp8
gi|347836724|emb|CCD51296.1| hypothetical protein [Botryotinia fuckeliana]
Length = 545
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 161/393 (40%), Positives = 232/393 (59%), Gaps = 30/393 (7%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA+PILQ E FA VL+PTRELA+QI EQF+A
Sbjct: 153 GRDCIGGSRTGSGKTVAFAVPILQKWAEDPF------GIFALVLTPTRELALQIYEQFKA 206
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YL 125
+ S SL+ ++ GG DM Q AL +RPHIV+ATPGRL DH+ + ++G L+ +
Sbjct: 207 ISSPQSLKAVLITGGSDMRPQATALAQRPHIVIATPGRLADHIRTSGEDTIGALRRVRMV 266
Query: 126 VLDEADRLLNDDFEKSL----DEILNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKN 176
VLDEADRLL S+ +E L+++P RQT LF+AT+T +V+ L+ R K
Sbjct: 267 VLDEADRLLASGSVGSMLPDVEECLSILPPPAKRQTLLFTATVTPEVRALKDMPRTPGKL 326
Query: 177 PVKI-EAASKYSTVD-TLKQQYRFVPAKYKDCYL-VYILTEVS-ASSTMVFTRTCDATRL 232
PV + E ++ + +L Q + VP +++ YL +++LTE + S ++F
Sbjct: 327 PVFVCEVDTQALAIPPSLNQMHLQVPVTHREHYLHMFLLTEKNLPKSIVIFCNRTATADY 386
Query: 233 LALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINY 292
L +LR L R + + Q +R+ L +F+A IL+ TDVA+RGLDIP V +VINY
Sbjct: 387 LTHLLRLLDHRVTALHSKLPQRQRIDNLGRFRASAARILVATDVAARGLDIPEVGLVINY 446
Query: 293 DIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA-----EE 347
DIP + DYIHRVGRTARAGR G A+S V Q +++ IE +G+++ + E
Sbjct: 447 DIPRDPDDYIHRVGRTARAGRKGEAVSFVGQRDVQLIQAIENRVGRQMEAWAEDGVNLET 506
Query: 348 EEVLLLLERVTEAKRISQMTIKDS---GNKRRR 377
+ L+ V E KR + + I++ G KR+R
Sbjct: 507 RVIRESLKLVGEKKREAMLEIEEGREVGGKRKR 539
>gi|374600905|ref|ZP_09673907.1| DEAD/DEAH box helicase domain protein [Myroides odoratus DSM 2801]
gi|423325478|ref|ZP_17303318.1| hypothetical protein HMPREF9716_02675 [Myroides odoratimimus CIP
103059]
gi|373912375|gb|EHQ44224.1| DEAD/DEAH box helicase domain protein [Myroides odoratus DSM 2801]
gi|404606330|gb|EKB05882.1| hypothetical protein HMPREF9716_02675 [Myroides odoratimimus CIP
103059]
Length = 370
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 141/333 (42%), Positives = 202/333 (60%), Gaps = 4/333 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIG AQTG+GKT +FA+PILQ L + + +++ + + +L+PTRELAIQI+E F+
Sbjct: 38 GRDLIGCAQTGTGKTASFAIPILQLLNQKSSSKKVIRSL---ILTPTRELAIQINENFKI 94
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G + LR + GGV +Q L + I++ATPGRL+D L N ++ +VLD
Sbjct: 95 YGEFLRLRHLAVFGGVPQKKQVAQLNRGVDILIATPGRLLD-LLNQHCLDFNHVEIVVLD 153
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F K + +IL IP RQT FSATM ++KKL ++NP++I ST
Sbjct: 154 EADRMLDMGFVKDVKKILTKIPSKRQTLFFSATMPIEIKKLALQIVRNPIEITVTPISST 213
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
T+KQ FV + K L IL + S ++VF RT L L +LG I
Sbjct: 214 ARTIKQSIYFVEKEEKLNLLFTILKDKSIKRSLVFARTKHGADKLVKKLASLGIYTAAIH 273
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ+ RL ALN FK +LI TD+A+RG+DI + V+NY++P + Y+HR+GRT
Sbjct: 274 GNKSQNARLKALNDFKNNRIRVLIATDIAARGIDIAELPHVLNYELPNEPESYVHRIGRT 333
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
RAG G A+S ++ +L+ +IEKLIG +P
Sbjct: 334 GRAGVQGTAVSFCDEDQLKDLKKIEKLIGFTIP 366
>gi|390629713|ref|ZP_10257706.1| DEAD box ATP-dependent RNA helicase SrmB [Weissella confusa LBAE
C39-2]
gi|390485109|emb|CCF30054.1| DEAD box ATP-dependent RNA helicase SrmB [Weissella confusa LBAE
C39-2]
Length = 527
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 147/345 (42%), Positives = 201/345 (58%), Gaps = 8/345 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKD+IG AQTG+GKT AF LPIL+ +++ NQ A V+SPTRELAIQ ++
Sbjct: 37 AGKDVIGQAQTGTGKTAAFGLPILE-MIDTDSNQ-----VQALVVSPTRELAIQTQDELF 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
LG ++ + GG D+ +Q L HIVV TPGRL+DH+ N +L +K LVL
Sbjct: 91 KLGRDKRVKVQAVFGGADIRRQINGLSHGAHIVVGTPGRLIDHI-NRGTINLSNVKTLVL 149
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEAD +LN F + ++ IL +P RQT LFSATM +K++ + NP I+ A+K
Sbjct: 150 DEADEMLNMGFLEDIESILKAVPDQRQTLLFSATMPPAIKRIGVQFMTNPEHIQIAAKEL 209
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
T D ++Q Y V K L IL ++F RT L L G A I
Sbjct: 210 TTDLVEQFYVRVRDFEKFDTLTRILDVQQPKLAIMFGRTKRRVDELTRGLELRGFNAAGI 269
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++Q KR L +FK GE IL+ TDVA+RGLD+ VD V N+DIP +S+ Y+HR+GR
Sbjct: 270 HGDLTQQKRSQVLKQFKNGEIKILVATDVAARGLDVSGVDYVYNFDIPQDSESYVHRIGR 329
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKL-PEFPAEEEEVL 351
T RAG TG +++ ++ E+++ IEKL K++ P P EE L
Sbjct: 330 TGRAGATGTSVTFISNAEMDYLKDIEKLTKKRMQPLKPPTREEAL 374
>gi|355683275|gb|AER97071.1| DEAD box polypeptide 27 [Mustela putorius furo]
Length = 712
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 139/329 (42%), Positives = 198/329 (60%), Gaps = 6/329 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+ A TG+GKT AFALP+L+ L+ R P +L PTREL IQ+ +
Sbjct: 223 GKDICACAATGTGKTAAFALPVLERLIY---KPRQAPVTRVLILVPTRELGIQVHSVTKQ 279
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L S+ + VGG+D+ Q AL P I++ATPGRL+DHL N F L +++ L+LD
Sbjct: 280 LAQFCSITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILD 339
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L++ FE+ + EI+ + RQT LFSATMT +VK L LKNPV+I S
Sbjct: 340 EADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDV 399
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
L+Q++ R P + D + +LT M+FT+T + ++L +G +
Sbjct: 400 APFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVG 459
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G++SQ++RL AL +FK + +IL+ TDVA+RGLDI V VIN+ +P K Y+HRV
Sbjct: 460 ELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRV 519
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEK 334
GRTARAGR G ++SLV + E + +I K
Sbjct: 520 GRTARAGRAGRSVSLVGEEERKMLKEIVK 548
>gi|391867361|gb|EIT76607.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 413
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 245/410 (59%), Gaps = 37/410 (9%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA+PILQ + A++ + FA VL+PTRELA+QI EQ +A
Sbjct: 20 GRDCIGGSRTGSGKTIAFAVPILQ---KWAQDPFGI---FAVVLTPTRELALQIYEQIKA 73
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKY 124
+ + S++ ++ GG DM Q LAL +RPH+V+ATPGRL DH+ NT G L ++
Sbjct: 74 ISAPQSMKPLLITGGTDMRSQALALSQRPHVVIATPGRLADHI-NTSGEDTVCGLKRVRM 132
Query: 125 LVLDEADRLLNDDFEKSLDEI---LNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKN 176
+VLDEADRLL L ++ L+ +P RQT LF+AT+T +V+ L+ RA K
Sbjct: 133 VVLDEADRLLAPGPGSMLPDVETCLSALPPSSERQTLLFTATLTPEVRALKSMPRAENKP 192
Query: 177 PV---KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATR-- 231
PV +I + + TLKQ Y VP +++ +L ++L +ST C+ T+
Sbjct: 193 PVFVTEISTENNGAIPPTLKQTYLKVPMTHREAFL-HVLLSTEGNSTKPAIIFCNHTKTA 251
Query: 232 -LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVI 290
LL MLR L R + + QS+R L +F+A IL+ TDVASRGLDIPSV +VI
Sbjct: 252 DLLERMLRRLSHRVTSLHSLLPQSERNSNLARFRASAARILVATDVASRGLDIPSVSLVI 311
Query: 291 NYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEV 350
N+D+P N DY+HRVGRTARAGR G A++LV Q +++ L IE+ + +++ E+ EE V
Sbjct: 312 NFDVPRNPDDYVHRVGRTARAGRHGEAVTLVGQRDVQLVLAIEERVERRMEEW--SEEGV 369
Query: 351 LLLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQ-FGINKKKLSK 399
+ E + + +K+ G +R G+ ++ GR G + KL K
Sbjct: 370 SI------EGRVVRGGVLKEVGEAKREASGEIEE--GRDVLGRKRNKLKK 411
>gi|254578822|ref|XP_002495397.1| ZYRO0B10318p [Zygosaccharomyces rouxii]
gi|238938287|emb|CAR26464.1| ZYRO0B10318p [Zygosaccharomyces rouxii]
Length = 750
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 138/331 (41%), Positives = 206/331 (62%), Gaps = 21/331 (6%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFAC----VLSPTRELAIQISE 64
GKD+I A TGSGKT AF +PI++ L+ PA A VL+PTRELAIQ+++
Sbjct: 274 GKDIIAGAVTGSGKTAAFMIPIIERLI-------YKPAKVASTRVIVLAPTRELAIQVAD 326
Query: 65 QFEALGSGIS-LRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK 123
+ LG ++ L + VGG+++ QQ L RP IV+ATPGR +DH+ N+ F++ +++
Sbjct: 327 VGKKLGKYVNGLTFGIAVGGLNLRQQEQILKTRPDIVIATPGRFIDHIRNSSSFNVDSVE 386
Query: 124 YLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAA 183
LV+DEADR+L + F+ ++EI++++P RQT LFSATM K+K+L LK PV++
Sbjct: 387 VLVIDEADRMLEEGFQDEINEIMHLLPSKRQTMLFSATMNSKIKQLVSLSLKRPVRVMTD 446
Query: 184 SKYSTVDTLKQQYRFVPAKYKDC-------YLVYILTEVSASSTMVFTRTCDATRLLALM 236
V L+Q+ FV + +D YL+ L + +VF + L ++
Sbjct: 447 PPQQAVSKLQQE--FVRIRKRDHLKPSTLFYLIKKLDGAAQKRMVVFVSKKEMVHRLRII 504
Query: 237 LRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPT 296
L LG + G ++Q +RL ++NKFK+ E +LICTD+ASRGLDIP +++VINYD+P
Sbjct: 505 LGLLGMAVAELHGSLNQEQRLQSINKFKSLEVPVLICTDLASRGLDIPKIEVVINYDMPK 564
Query: 297 NSKDYIHRVGRTARAGRTGVAISLVNQYELE 327
+ + Y+HRVGRTARAGR G ++S V + E
Sbjct: 565 SFEIYLHRVGRTARAGREGRSVSFVGETSQE 595
>gi|119494918|ref|XP_001264258.1| ATP-dependent RNA helicase (Drs1), putative [Neosartorya fischeri
NRRL 181]
gi|142982588|sp|A1D1R8.1|DRS1_NEOFI RecName: Full=ATP-dependent RNA helicase drs1
gi|119412420|gb|EAW22361.1| ATP-dependent RNA helicase (Drs1), putative [Neosartorya fischeri
NRRL 181]
Length = 819
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 138/316 (43%), Positives = 191/316 (60%), Gaps = 6/316 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKT AF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 336 GKDIVGSAVTGSGKTAAFVVPILERLLF---RPRKVPTSRVAILMPTRELAVQCYNVATK 392
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + LVGG + +Q L KRP +++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 393 LATHTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSPSFTVDTLEILVLD 452
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EIL IP+ RQT LFSATMT V KL R L PV++ SK +T
Sbjct: 453 EADRMLEDGFADELNEILTTIPQSRQTMLFSATMTDSVDKLIRVGLNRPVRLMVDSKKNT 512
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
L Q++ R P + YL+Y+ E+ +VF R + ++ LG +A
Sbjct: 513 SMNLTQEFVRLRPGREDKRLGYLLYLCNEIYTGRVIVFFRQKREAHRVRIVFGLLGLKAA 572
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ ++ F+ G+ L+ TD+ASRGLDI V+ VINY+ P + + Y+HRV
Sbjct: 573 ELHGSMSQEQRIKSVENFREGKVAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRV 632
Query: 306 GRTARAGRTGVAISLV 321
GRTARAGR+G A ++
Sbjct: 633 GRTARAGRSGRACTIA 648
>gi|317143933|ref|XP_001819794.2| ATP-dependent RNA helicase dbp8 [Aspergillus oryzae RIB40]
Length = 523
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 166/409 (40%), Positives = 238/409 (58%), Gaps = 35/409 (8%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA+PILQ + FA VL+PTRELA+QI EQ +A
Sbjct: 130 GRDCIGGSRTGSGKTIAFAVPILQKWAQDPF------GIFAVVLTPTRELALQIYEQIKA 183
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG----FSLGTLKY 124
+ + S++ ++ GG DM Q LAL +RPH+V+ATPGRL DH+ NT G L ++
Sbjct: 184 ISAPQSMKPLLITGGTDMRSQALALSQRPHVVIATPGRLADHI-NTSGEDTVCGLKRVRM 242
Query: 125 LVLDEADRLLNDDFEKSLDEI---LNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKN 176
+VLDEADRLL L ++ L+ +P RQT LF+AT+T +V+ L+ RA K
Sbjct: 243 VVLDEADRLLAPGPGSMLPDVETCLSALPPSSERQTLLFTATLTPEVRALKSMPRAENKP 302
Query: 177 PV---KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATR 231
PV +I + + TLKQ Y VP +++ +L +L+ S ++F
Sbjct: 303 PVFVTEISTENNGAIPPTLKQTYLKVPMTHREAFLHVLLSTERNSTKPAIIFCNHTKTAD 362
Query: 232 LLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVIN 291
LL MLR L R + + QS+R L +F+A IL+ TDVASRGLDIPSV +VIN
Sbjct: 363 LLERMLRRLSHRVTSLHSLLPQSERNSNLARFRASAARILVATDVASRGLDIPSVSLVIN 422
Query: 292 YDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 351
+D+P N DY+HRVGRTARAGR G A++LV Q +++ L IE+ + +++ E+ EE V
Sbjct: 423 FDVPRNPDDYVHRVGRTARAGRHGEAVTLVGQRDVQLVLAIEERVERRMEEW--SEEGVS 480
Query: 352 LLLERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQ-FGINKKKLSK 399
+ E + + +K+ G +R G+ ++ GR G + KL K
Sbjct: 481 I------EGRVVRGGVLKEVGEAKREASGEIEE--GRDVLGRKRNKLKK 521
>gi|326473339|gb|EGD97348.1| ATP-dependent RNA helicase DRS1 [Trichophyton tonsurans CBS 112818]
Length = 700
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 138/315 (43%), Positives = 195/315 (61%), Gaps = 6/315 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKTGAF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 333 GKDVVGGAVTGSGKTGAFIVPILERLLY---RPRKVPTSRVAILMPTRELAVQCYNVATK 389
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + LVGG + +Q L KRP +++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 390 LATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLD 449
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F + L+EIL IP+ RQT LFSATMT V KL R L PV++ SK T
Sbjct: 450 EADRMLEDGFAEELNEILTTIPKSRQTMLFSATMTNSVDKLIRVGLNKPVRLMVDSKKQT 509
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
V TL Q++ R P + YL+++ V ++ +VF R + ++ +G +A
Sbjct: 510 VGTLVQEFVRLRPGREDKRLGYLMFLCKTVYSNRVIVFFRQKKEAHRVRIVFGLMGLKAA 569
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ ++ F+ + + L+ TD+ASRGLDI V+ VINY+ P + + Y+HRV
Sbjct: 570 ELHGSMSQEQRIKSVEDFRDAKVSYLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRV 629
Query: 306 GRTARAGRTGVAISL 320
GRTARAGR+G A ++
Sbjct: 630 GRTARAGRSGRACTI 644
>gi|121700981|ref|XP_001268755.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus clavatus
NRRL 1]
gi|142982514|sp|A1CNV8.1|DRS1_ASPCL RecName: Full=ATP-dependent RNA helicase drs1
gi|119396898|gb|EAW07329.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus clavatus
NRRL 1]
Length = 826
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 138/316 (43%), Positives = 192/316 (60%), Gaps = 6/316 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKT AF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 343 GKDIVGSAVTGSGKTAAFVVPILERLLF---RPRKVPTSRVAILMPTRELAVQCYNVATK 399
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + LVGG + +Q L KRP +++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 400 LATHTDVTFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSPSFTVDTLEILVLD 459
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EIL IP+ RQT LFSATMT V KL R L PV++ SK +T
Sbjct: 460 EADRMLEDGFADELNEILTTIPKSRQTMLFSATMTDSVDKLIRVGLNRPVRLMVDSKKNT 519
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
L Q++ R P + YL+Y+ +E+ +VF R + ++ LG +A
Sbjct: 520 SMNLTQEFVRLRPGREGKRLGYLLYLCSEIFTGRVIVFFRQKKEAHRVRIVFGLLGLKAA 579
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ ++ F+ G+ L+ TD+ASRGLDI V+ VINY+ P + + Y+HRV
Sbjct: 580 ELHGSMSQEQRIKSVESFREGKVAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRV 639
Query: 306 GRTARAGRTGVAISLV 321
GRTARAGR+G A ++
Sbjct: 640 GRTARAGRSGRACTIA 655
>gi|115492615|ref|XP_001210935.1| hypothetical protein ATEG_00849 [Aspergillus terreus NIH2624]
gi|121742543|sp|Q0CZN5.1|DRS1_ASPTN RecName: Full=ATP-dependent RNA helicase drs1
gi|114197795|gb|EAU39495.1| hypothetical protein ATEG_00849 [Aspergillus terreus NIH2624]
Length = 821
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 139/318 (43%), Positives = 193/318 (60%), Gaps = 6/318 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKT AF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 341 GKDIVGSAVTGSGKTAAFVVPILERLLF---RPRKVPTSRVAILMPTRELAVQCYNVATK 397
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + LVGG + +Q L KRP +++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 398 LATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLD 457
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F L+EIL IP+ RQT LFSATMT V KL R L PV++ SK +T
Sbjct: 458 EADRMLEDGFADELNEILTTIPKSRQTMLFSATMTDTVDKLIRVGLNRPVRLMVDSKKNT 517
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
TL Q++ R P + YL+Y+ E+ +VF R + ++ LG +A
Sbjct: 518 SLTLVQEFVRLRPGREDKRLGYLLYLCKEIYTGRVIVFFRQKREAHRVRIVFGLLGLKAA 577
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ ++ F+ G+ L+ TD+ASRGLDI V+ VINY+ P + + Y+HRV
Sbjct: 578 ELHGSMSQEQRIKSVENFRDGKVAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRV 637
Query: 306 GRTARAGRTGVAISLVNQ 323
GRTARAGR+G A ++ +
Sbjct: 638 GRTARAGRSGRACTIAAE 655
>gi|334131082|ref|ZP_08504848.1| ATP-dependent RNA helicase [Methyloversatilis universalis FAM5]
gi|333443712|gb|EGK71673.1| ATP-dependent RNA helicase [Methyloversatilis universalis FAM5]
Length = 535
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 137/341 (40%), Positives = 204/341 (59%), Gaps = 6/341 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFA--CVLSPTRELAIQISEQ 65
AG+DL+ AQTG+GKT F LPIL LL ++PA VL+PTRELA Q+ E
Sbjct: 41 AGRDLLAAAQTGTGKTAGFTLPILHTLLN---RPASIPAGRPRVLVLTPTRELAAQVEES 97
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
G +R V+ GGV M Q AL +R I+VATPGRL+DH+ K L ++
Sbjct: 98 VRTYGRHAKMRSMVMFGGVGMNPQLQALKQRVDILVATPGRLLDHV-GEKSLDLSGVEIF 156
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F + + +++ V+P++RQT L+SAT + ++++L L +P ++E A +
Sbjct: 157 VLDEADRMLDMGFIRDIRKVIAVLPKVRQTLLYSATFSPEIRELAHGLLNDPAEVEVAPR 216
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T + + Q+ V K K L +++ + + S +VFTRT LA L G A
Sbjct: 217 NTTAERVAQEVYMVEQKQKRHLLAHLINQGAWSQVLVFTRTKHGANRLAEQLDKQGITAA 276
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G+ SQ+ R AL FK+ +L+ TD+A+RGLDI + V+N+++P +DY+HR+
Sbjct: 277 AIHGNKSQNARTRALADFKSNTLRVLVATDIAARGLDIDQLPHVVNFELPNVPEDYVHRI 336
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAE 346
GRT RAG +G AISLV++ E + IEK+ + +P AE
Sbjct: 337 GRTGRAGASGAAISLVDREEAKLLTAIEKVTRQSIPRATAE 377
>gi|198423018|ref|XP_002125988.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
[Ciona intestinalis]
Length = 718
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 136/330 (41%), Positives = 203/330 (61%), Gaps = 6/330 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+ A TG+GKT AF LP+L+ LL ++ P L PTRELA+Q+
Sbjct: 208 GRDICACAATGTGKTAAFMLPVLERLLY---RTQSTPITRVLCLVPTRELAVQVYSVTHH 264
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L +LR + GG+DM Q AL + P IV+ATPGRL+DHL NT F L ++ L+LD
Sbjct: 265 LAQHSNLRICLAAGGLDMKSQEAALRQGPDIVIATPGRLIDHLHNTPSFDLQMVEILILD 324
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L++ FE ++EI+ + RQT LFSATM+++V++L LKNPVKI S
Sbjct: 325 EADRMLDEFFEDQMNEIIKLCSHHRQTMLFSATMSEQVQELAAVSLKNPVKIFVNSNTDV 384
Query: 189 VDTLKQQY---RFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
L+Q++ R ++ + + + S+ +VFT+T + ++L LG +A
Sbjct: 385 APFLRQEFIRIRETREGDREAIVAALCSRSFISNVLVFTQTKKQAHRMHIVLGLLGLKAG 444
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G++SQ +RL +L +FK G+ +IL+CTD+A+RGLDI +V VIN +P + Y+HRV
Sbjct: 445 ELHGNLSQGQRLESLKRFKNGDIDILVCTDLAARGLDIENVKTVINLTMPNTQQHYVHRV 504
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKL 335
GRTARAG++G ++SLV + E + +I K
Sbjct: 505 GRTARAGKSGRSVSLVGETERKLLKEIVKF 534
>gi|431928590|ref|YP_007241624.1| DNA/RNA helicase [Pseudomonas stutzeri RCH2]
gi|431826877|gb|AGA87994.1| DNA/RNA helicase, superfamily II [Pseudomonas stutzeri RCH2]
Length = 441
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/338 (41%), Positives = 205/338 (60%), Gaps = 12/338 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALL----EIAENQRTVPAFFACVLSPTRELAIQISE 64
G+DL+ AQTG+GKT FALP+LQ L ++A N + A VL PTRELA Q+ E
Sbjct: 38 GRDLMAAAQTGTGKTAGFALPLLQRLTMEGAKVASN-----SVRALVLVPTRELAEQVHE 92
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMD-HLTNTKGFSLGTLK 123
F G + LR + GGV + Q +AL K ++VATPGRL+D + N GF+ L+
Sbjct: 93 SFRVYGQNLPLRTYAVYGGVSINPQMMALRKGIDVLVATPGRLLDLYRQNAVGFN--QLQ 150
Query: 124 YLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAA 183
LVLDEADR+L+ F LD++ + +P+ RQT LFSAT ++ ++++ R L++P+ +E +
Sbjct: 151 ALVLDEADRMLDLGFADELDQLFSALPKKRQTLLFSATFSEAIRQMARELLRDPLSVEVS 210
Query: 184 SKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQR 243
+ + T+KQ V K K +++L E +VF +T L L+ G
Sbjct: 211 PRNAAAKTVKQWLVPVDKKRKSELFLHLLAEKRWGQVLVFVKTRKGVDQLVDELQAAGIS 270
Query: 244 AIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIH 303
+ I G Q+ RL AL +FKAGE +L+ TDVA+RGLDI + V+N+D+P ++DY+H
Sbjct: 271 SDAIHGDKPQASRLRALERFKAGEVQVLVATDVAARGLDIHDLPQVVNFDLPIVAEDYVH 330
Query: 304 RVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
R+GRT RAG TG A+SLV+ E++ IE LI + LP
Sbjct: 331 RIGRTGRAGATGEAVSLVSADEVDQLAAIETLINQVLP 368
>gi|115396304|ref|XP_001213791.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|121738779|sp|Q0CNX1.1|DBP8_ASPTN RecName: Full=ATP-dependent RNA helicase dbp8
gi|114193360|gb|EAU35060.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 527
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 167/406 (41%), Positives = 238/406 (58%), Gaps = 43/406 (10%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D IG ++TGSGKT AFA+PILQ E FA VL+PTRELA+QI EQF+A
Sbjct: 123 GRDCIGGSRTGSGKTIAFAVPILQKWAEDPF------GIFAVVLTPTRELALQIYEQFKA 176
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK---YL 125
+ + S++ ++ GG DM Q LAL +RPH+V+ATPGRL DH+ + ++ LK +
Sbjct: 177 ISAPQSMKPVLITGGTDMRPQALALSQRPHVVIATPGRLADHIQTSGEDTVRGLKRVRMV 236
Query: 126 VLDEADRLLNDDFEKSLDEI---LNVIP--RMRQTYLFSATMTKKVKKLQ---RACLKNP 177
VLDEADRLL L ++ L+ +P RQT LF+AT+T +V+ L+ RA K P
Sbjct: 237 VLDEADRLLAPGPGSMLPDVETCLSALPPSSERQTLLFTATVTPEVRALKSMPRASTKPP 296
Query: 178 V---KIEA-----------ASKYSTVDTLKQQYRFVPAKYKDCYLVYILTE--VSASSTM 221
V +IEA A K + TLKQ Y VP +++ +L +L+ + +
Sbjct: 297 VFVTEIEAGGTTSAGADGAAPKSTLPPTLKQTYLKVPMTHREAFLHVLLSTDGNAGKPAI 356
Query: 222 VFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGL 281
+F LL +LR L R + + QS+R L +F+A IL+ TDVASRGL
Sbjct: 357 IFCNHTKTADLLERLLRRLAHRVTSLHSLLPQSERSSNLARFRASAARILVATDVASRGL 416
Query: 282 DIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
DIPSV +V+NYD+P N DY+HRVGRTARAGR G A++LV Q +++ L IE+ +G+++
Sbjct: 417 DIPSVALVVNYDVPRNPDDYVHRVGRTARAGRRGEAVTLVGQRDVQLVLAIEERVGRQME 476
Query: 342 EFPAE----EEEVLL--LLERVTEAKRISQMTIKDS----GNKRRR 377
E+ E E V+ +L+ V AKR + + I++ G KR +
Sbjct: 477 EWSEEGVSVEGRVVRTGVLKEVGSAKREALIEIEEGRDVLGRKRNK 522
>gi|257899462|ref|ZP_05679115.1| helicase [Enterococcus faecium Com15]
gi|293573030|ref|ZP_06683972.1| cold-shock deAd box protein a [Enterococcus faecium E980]
gi|430842364|ref|ZP_19460279.1| DEAD/DEAH box helicase [Enterococcus faecium E1007]
gi|431081588|ref|ZP_19495678.1| DEAD/DEAH box helicase [Enterococcus faecium E1604]
gi|431118220|ref|ZP_19498174.1| DEAD/DEAH box helicase [Enterococcus faecium E1613]
gi|431592214|ref|ZP_19521450.1| DEAD/DEAH box helicase [Enterococcus faecium E1861]
gi|431738949|ref|ZP_19527889.1| DEAD/DEAH box helicase [Enterococcus faecium E1972]
gi|431740772|ref|ZP_19529683.1| DEAD/DEAH box helicase [Enterococcus faecium E2039]
gi|257837374|gb|EEV62448.1| helicase [Enterococcus faecium Com15]
gi|291606932|gb|EFF36312.1| cold-shock deAd box protein a [Enterococcus faecium E980]
gi|430493445|gb|ELA69748.1| DEAD/DEAH box helicase [Enterococcus faecium E1007]
gi|430565520|gb|ELB04666.1| DEAD/DEAH box helicase [Enterococcus faecium E1604]
gi|430568177|gb|ELB07234.1| DEAD/DEAH box helicase [Enterococcus faecium E1613]
gi|430591839|gb|ELB29866.1| DEAD/DEAH box helicase [Enterococcus faecium E1861]
gi|430596492|gb|ELB34316.1| DEAD/DEAH box helicase [Enterococcus faecium E1972]
gi|430602855|gb|ELB40405.1| DEAD/DEAH box helicase [Enterococcus faecium E2039]
Length = 503
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 146/345 (42%), Positives = 207/345 (60%), Gaps = 13/345 (3%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKD+IG AQTG+GKT AF LP+L+ +I ++ + V++PTRELAIQ E+
Sbjct: 37 AGKDVIGQAQTGTGKTAAFGLPMLE---KIDPDRHELQGL---VIAPTRELAIQTQEELY 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
LG +R + GG D+ +Q L RPHIVV TPGR++DH+ N LGT++ LVL
Sbjct: 91 RLGRDKKVRVQAVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHI-NRHTLKLGTVQTLVL 149
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEAD +LN F + +++I++ +P RQT LFSATM +K + +K+P ++ +K
Sbjct: 150 DEADEMLNMGFLEDIEKIISQVPEQRQTLLFSATMPPAIKNIGVKFMKSPHHVKIKAKEM 209
Query: 188 TVDTLKQQYRFVPAK-YKDCYLVYILTEVSASS-TMVFTRTCDATRLLALMLRNLGQRAI 245
T D + Q Y V AK Y+ ++ L +V T+VF RT LA L G RA
Sbjct: 210 TADLIDQYY--VRAKEYEKFDIMTRLFDVQTPELTIVFGRTKRRVDELARGLEARGYRAE 267
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G +SQ KR+ L FK G +IL+ TDVA+RGLDI V V NYDIP + + Y+HR+
Sbjct: 268 GIHGDLSQQKRMSVLRSFKNGHLDILVATDVAARGLDISGVTHVYNYDIPQDPESYVHRI 327
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEF--PAEEE 348
GRT RAG+ G++++ V E+++ IE L K++ P E+E
Sbjct: 328 GRTGRAGKGGMSVTFVTPNEMDYLHVIENLTKKRMTTLRPPTEKE 372
>gi|387902864|ref|YP_006333203.1| ATP-dependent RNA helicase [Burkholderia sp. KJ006]
gi|387577756|gb|AFJ86472.1| ATP-dependent RNA helicase [Burkholderia sp. KJ006]
Length = 493
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 159/384 (41%), Positives = 216/384 (56%), Gaps = 13/384 (3%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT +F+LPI+Q LL A + PA A +L+PTRELA Q++
Sbjct: 47 AGRDVMGAAQTGTGKTASFSLPIIQRLLPHASTSAS-PARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A +LR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVHAYAKHTALRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQM 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L+NP IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
ST + Q V K +V +L +VF + LA L G A
Sbjct: 225 SNSTNANVTQIVYDVAEGDKQAAVVQLLRGRGLKQVIVFCNSKIGASRLARNLERDGVVA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQ +R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 SAIHGDKSQIERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRIS 364
+GRT RAG TG A+SL + E + IEKLI + L EV L R
Sbjct: 345 IGRTGRAGATGDALSLCSPNERKQLADIEKLIKRPL--------EVQTLALDKPARHRHD 396
Query: 365 QMTIKDSGNKRRRKGGDEDDDIGR 388
+ ++ +R +GG D D R
Sbjct: 397 ERGERNERGERSERGGRRDRDEHR 420
>gi|327295054|ref|XP_003232222.1| ATP-dependent RNA helicase DRS1 [Trichophyton rubrum CBS 118892]
gi|326465394|gb|EGD90847.1| ATP-dependent RNA helicase DRS1 [Trichophyton rubrum CBS 118892]
Length = 813
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 138/316 (43%), Positives = 194/316 (61%), Gaps = 6/316 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G A TGSGKTGAF +PIL+ LL R VP +L PTRELA+Q
Sbjct: 333 GKDVVGGAVTGSGKTGAFIVPILERLLY---RPRKVPTSRVAILMPTRELAVQCYNVATK 389
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L + + LVGG + +Q L KRP +++ATPGR +DH+ N+ F++ TL+ LVLD
Sbjct: 390 LATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLD 449
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L D F + L+EIL IP+ RQT LFSATMT V KL R L PV++ SK T
Sbjct: 450 EADRMLEDGFAEELNEILTTIPKSRQTMLFSATMTSSVDKLIRLGLNKPVRLMVDSKKQT 509
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
V TL Q++ R P + YL+++ V + +VF R + ++ +G +A
Sbjct: 510 VGTLVQEFVRLRPGREDKRLGYLMFLCKTVYTNRVIVFFRQKKEAHRVRIIFGLMGLKAA 569
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G MSQ +R+ ++ F+ + + L+ TD+ASRGLDI V+ VINY+ P + + Y+HRV
Sbjct: 570 ELHGSMSQEQRIKSVEDFRDAKVSYLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRV 629
Query: 306 GRTARAGRTGVAISLV 321
GRTARAGR+G A ++
Sbjct: 630 GRTARAGRSGRACTIA 645
>gi|415886177|ref|ZP_11548000.1| DEAD/DEAH box helicase domain protein [Bacillus methanolicus MGA3]
gi|387588830|gb|EIJ81151.1| DEAD/DEAH box helicase domain protein [Bacillus methanolicus MGA3]
Length = 485
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 142/331 (42%), Positives = 199/331 (60%), Gaps = 7/331 (2%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
KDLIG AQTG+GKT AF +P+++ + +I ++ V++PTRELAIQ+SE+ +
Sbjct: 40 KDLIGQAQTGTGKTAAFGIPLIEKI-DIDQD-----VIQGIVVAPTRELAIQVSEELFKI 93
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
G G R + GG D+ +Q AL KRPHI+V TPGR++DH+ N K L +K VLDE
Sbjct: 94 GYGKKARVLAIFGGQDISRQIKALKKRPHIIVGTPGRILDHI-NRKTIRLDNVKMAVLDE 152
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
AD +LN F ++ IL IP+ RQT LFSATM ++++ +KNP + SK TV
Sbjct: 153 ADEMLNMGFIDDIEAILAQIPKERQTLLFSATMPAPIQRMAEKFMKNPQIVRVQSKEMTV 212
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
++Q Y V K K L +L S +VF RT L+ L G A I G
Sbjct: 213 PQIEQFYLEVHEKNKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLRGYMAEGIHG 272
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+SQ+KRL L KFK G ++L+ TDVA+RGLDI V V N+DIP + + Y+HR+GRT
Sbjct: 273 DLSQAKRLSVLRKFKEGLIDVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTG 332
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
RAG+TG+A++ V E + +EK I +++
Sbjct: 333 RAGKTGMAMTFVTPREKAYLKIVEKTIKRRM 363
>gi|167835963|ref|ZP_02462846.1| ATP-dependent RNA helicase RhlE [Burkholderia thailandensis MSMB43]
Length = 397
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 146/336 (43%), Positives = 203/336 (60%), Gaps = 5/336 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
+G+D++G AQTG+GKT +F+LPI+Q LL A N PA A +L+PTRELA Q++
Sbjct: 47 SGRDVMGAAQTGTGKTASFSLPIIQRLLPQA-NTSASPARHPVRALILTPTRELADQVAA 105
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
A LR AV+ GGVDM Q L + I++ATPGRL+DH+ K +LG ++
Sbjct: 106 NVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQ-KTANLGQVQI 164
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L ILN++P+ RQT LFSAT + ++KKL L++P IE A
Sbjct: 165 LVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRDPQTIEVAR 224
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRA 244
+ T+ Q V K +V ++ + S +VF + LA + G A
Sbjct: 225 SNAAASTVTQIVYDVAEGDKQAAVVKLIRDRSLKQVIVFCNSKIGASRLARQIERDGIVA 284
Query: 245 IPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHR 304
I G SQS+R+ AL+ FK GE L+ TDVA+RGLDI + VIN+D+P N++DY+HR
Sbjct: 285 AAIHGDRSQSERMQALDAFKRGEIEALVATDVAARGLDIVELPAVINFDLPFNAEDYVHR 344
Query: 305 VGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
+GRT RAG +G A+SL + E + IEKLI + L
Sbjct: 345 IGRTGRAGASGDALSLCSPNERKQLADIEKLIKRTL 380
>gi|149278660|ref|ZP_01884796.1| possible ATP-dependent RNA helicase [Pedobacter sp. BAL39]
gi|149230655|gb|EDM36038.1| possible ATP-dependent RNA helicase [Pedobacter sp. BAL39]
Length = 435
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 140/332 (42%), Positives = 202/332 (60%), Gaps = 1/332 (0%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+DL+G AQTG+GKT AFA+P+LQ L + +N + A VL+PTRELAIQI E F+A
Sbjct: 39 RDLLGCAQTGTGKTAAFAIPMLQLLNKEHQNAKGPRPIRALVLTPTRELAIQIEESFKAY 98
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
G +SLR V+ GGV QT AL + I++ATPGRL+D L N +L ++ VLDE
Sbjct: 99 GRNLSLRHLVIFGGVGQKAQTDALHRGVDILIATPGRLLD-LMNQGFINLKDIEIFVLDE 157
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADR+L+ F + + + +P RQT FSATM +++KL L +P+K+E ST
Sbjct: 158 ADRMLDMGFIHDVKKTIAKLPAKRQTLFFSATMPPEIQKLANTILVDPLKVEVTPVSSTA 217
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
+ ++Q FV K L++IL + + + +VFTRT + L +G +A I G
Sbjct: 218 EKIEQMIYFVEKGDKKNLLIHILQDKTIQTALVFTRTKHGADRVVKDLIKVGVKAEAIHG 277
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+ SQ+ R AL FKA IL+ TD+A+RG+D+ + VINY++P + Y+HR+GRT
Sbjct: 278 NKSQNARQRALTNFKAKTTRILVATDIAARGIDVDELTHVINYELPNIPETYVHRIGRTG 337
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
RAG +G++ S + E E+ IEKLI K+P
Sbjct: 338 RAGNSGISFSFCDGEEKEFLDDIEKLIALKIP 369
>gi|298482320|ref|ZP_07000507.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. D22]
gi|298271607|gb|EFI13181.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. D22]
Length = 374
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 142/333 (42%), Positives = 201/333 (60%), Gaps = 2/333 (0%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
A +D++G AQTG+GKT +FA+PI+Q L E R A +L+PTRELA+QISE +
Sbjct: 37 AKRDILGCAQTGTGKTASFAIPIIQHLQLDKEAARR-QGIKALILTPTRELALQISECID 95
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
+R V+ GGV+ Q L K I+VATPGRL+D +T L T++Y VL
Sbjct: 96 DYSKHTRIRHGVIFGGVNQRPQVDLLRKGIDILVATPGRLLDLMTQGH-IHLDTIQYFVL 154
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L+ F + IL +P+ +QT FSATM + L ++ LKNPVKI K S
Sbjct: 155 DEADRMLDMGFIHDIKRILPKLPKEKQTLFFSATMPDSIISLTKSLLKNPVKIYITPKSS 214
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVD++KQ FV K K L+ IL++ S ++F+RT + +L G + I
Sbjct: 215 TVDSIKQVVYFVEKKEKSQLLISILSKAEDQSVLIFSRTKHNADKIVKILGKAGIGSQAI 274
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G+ SQ+ R AL FK+G+ +++ TD+ASRG+DI + +VINYD+P + Y+HR+GR
Sbjct: 275 HGNKSQAARQSALGNFKSGKTRVMVATDIASRGIDINELPLVINYDLPDVPETYVHRIGR 334
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKL 340
T RAG G A++ +Q E + I+KL GKKL
Sbjct: 335 TGRAGNMGTALTFCSQEERKLVNDIQKLTGKKL 367
>gi|409398007|ref|ZP_11248859.1| ATP-dependent RNA helicase [Pseudomonas sp. Chol1]
gi|409117513|gb|EKM93941.1| ATP-dependent RNA helicase [Pseudomonas sp. Chol1]
Length = 441
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 205/338 (60%), Gaps = 12/338 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALL----EIAENQRTVPAFFACVLSPTRELAIQISE 64
G+DL+ AQTG+GKT FALP+LQ L ++A N + A VL PTRELA Q+ E
Sbjct: 38 GRDLMAAAQTGTGKTAGFALPLLQRLTMEGAKVASN-----SVRALVLVPTRELAEQVHE 92
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMD-HLTNTKGFSLGTLK 123
F G + LR + GGV + Q +AL K ++VATPGRL+D + N GF+ L+
Sbjct: 93 SFRVYGQNLPLRTYAVYGGVSINPQMMALRKGIDVLVATPGRLLDLYRQNAVGFN--QLQ 150
Query: 124 YLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAA 183
LVLDEADR+L+ F LD++ +P+ RQT LFSAT ++ ++++ R L++P+ +E +
Sbjct: 151 ALVLDEADRMLDLGFADELDQLFCALPKRRQTLLFSATFSEAIRQMARELLRDPLSVEVS 210
Query: 184 SKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQR 243
+ + T+KQ V K K +++L E +VF +T L L+ G
Sbjct: 211 PRNAAAKTVKQWLVPVDKKRKSELFLHLLAERRWGQVLVFVKTRKGVDQLVDELQAQGIA 270
Query: 244 AIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIH 303
+ I G Q+ RL AL +FKAGE IL+ TDVA+RGLDI + V+N+D+PT ++DY+H
Sbjct: 271 SDAIHGDKPQASRLRALERFKAGEVRILVATDVAARGLDIHDLPQVVNFDLPTVAEDYVH 330
Query: 304 RVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
R+GRT RAG TG A+SLV+ E++ IE LI + LP
Sbjct: 331 RIGRTGRAGATGEAVSLVSADEVDQLAAIETLINQVLP 368
>gi|357013855|ref|ZP_09078854.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
elgii B69]
Length = 433
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 154/381 (40%), Positives = 218/381 (57%), Gaps = 6/381 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+DL G AQTG+GKT AF LPI+Q L + +L+PTRELAIQIS+ F+
Sbjct: 37 AGRDLFGCAQTGTGKTAAFLLPIIQLLSAQQRRPSGKRVIRSLILTPTRELAIQISDNFK 96
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS-LGTLKYLV 126
A G ++LR AV+VGGV Q AL + I++ATPGRL+D + +GF+ L ++ LV
Sbjct: 97 AYGRFLNLRSAVIVGGVSQKAQEQALEQGMDILIATPGRLIDLMN--QGFADLRHVQILV 154
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
LDEADR+L+ F + I+ +P RQT FSATM ++ L + L NP+KIE
Sbjct: 155 LDEADRMLDMGFIHDMRRIIAKLPAKRQTLFFSATMPPEITSLVDSLLTNPMKIEITPVS 214
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
ST + +KQ FV K L+ +L + S S +VFTRT L L A
Sbjct: 215 STAERIKQSLYFVDKPNKLPLLIDLLQDKSIESALVFTRTKHGADRLVKGLTKATITAQA 274
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
I G SQ+ R ALN FK G +L+ TD+A+RG+DI + VINY++P + Y+HR+G
Sbjct: 275 IHGDKSQNARQAALNNFKQGVTRMLVATDIAARGIDIEELSHVINYNLPNIPETYVHRIG 334
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQM 366
RT RAG +G+AIS E+ + IEKLI +K+P + + + E A R ++
Sbjct: 335 RTGRAGLSGIAISFCEYEEIPYLKDIEKLIKQKIPVI-GDHPYPMTMNESTPTAVRETRT 393
Query: 367 TIKDSGNK--RRRKGGDEDDD 385
++ S ++ R +GG +D
Sbjct: 394 SVTSSVDRVTRGHRGGTNRND 414
>gi|45184660|ref|NP_982378.1| AAL164Cp [Ashbya gossypii ATCC 10895]
gi|74695973|sp|Q75F95.1|DRS1_ASHGO RecName: Full=ATP-dependent RNA helicase DRS1
gi|44980006|gb|AAS50202.1| AAL164Cp [Ashbya gossypii ATCC 10895]
gi|374105576|gb|AEY94487.1| FAAL164Cp [Ashbya gossypii FDAG1]
Length = 734
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 139/325 (42%), Positives = 210/325 (64%), Gaps = 17/325 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFAC----VLSPTRELAIQISE 64
GKD+I A TGSGKT AF +PI++ LL PA A VL+PTRELAIQ+++
Sbjct: 256 GKDVIAGAVTGSGKTAAFMIPIIERLL-------YKPAKIASTRVLVLTPTRELAIQVAD 308
Query: 65 QFEALGSGIS-LRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLK 123
+ LG +S L + VGG+++ QQ AL RP IV+ATPGR++DH+ N+ FS+ +++
Sbjct: 309 VGKKLGKFVSGLTFGLAVGGLNLRQQEQALKLRPDIVIATPGRIIDHIRNSASFSVDSVE 368
Query: 124 YLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAA 183
LV+DEADR+L D F+ L+EI+++IP RQT LFSATM ++K+L LK PV+I
Sbjct: 369 VLVIDEADRMLEDGFQDELNEIMSLIPSKRQTLLFSATMNSRIKQLISLSLKKPVRIMID 428
Query: 184 SKYSTVDTLKQQY-RFVPAKY-KDCYLVYILTEVSASST---MVFTRTCDATRLLALMLR 238
+ L Q++ R ++ K L ++L ++ ++ +VF + L ++L
Sbjct: 429 PPKQAANKLTQEFVRLRKREHLKPALLYHLLRKLDSTGQKRIVVFVARKEVAHRLRVILG 488
Query: 239 NLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNS 298
LG +A + G ++Q +RL ++N FK+ + +L+CTD+ASRGLDIP +++VINYD+P
Sbjct: 489 LLGMKAGELHGSLTQEQRLQSVNNFKSLDVPVLVCTDLASRGLDIPKIEVVINYDMPKTY 548
Query: 299 KDYIHRVGRTARAGRTGVAISLVNQ 323
+ Y+HRVGRTARAGR G +++LV +
Sbjct: 549 EIYLHRVGRTARAGREGKSVTLVGE 573
>gi|284037338|ref|YP_003387268.1| DEAD/DEAH box helicase [Spirosoma linguale DSM 74]
gi|283816631|gb|ADB38469.1| DEAD/DEAH box helicase domain protein [Spirosoma linguale DSM 74]
Length = 485
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 140/333 (42%), Positives = 197/333 (59%), Gaps = 2/333 (0%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF-ACVLSPTRELAIQISEQFEA 68
+DL+G AQTG+GKT AFA+PILQ L E P +L+PTRELAIQI+E F A
Sbjct: 39 RDLLGCAQTGTGKTAAFAIPILQLLSEERSKSTGGPRRIKTLILTPTRELAIQIAESFTA 98
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
G +++R V+ GGV Q L +++ATPGRL+D L N SL +++ VLD
Sbjct: 99 YGRHLNIRNTVIFGGVSQHSQVNTLKAGVDVLIATPGRLLD-LMNQGFISLRDVQFFVLD 157
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L+ F + +++ +P RQ+ FSATM V KL L NP K+E ST
Sbjct: 158 EADRMLDMGFIHDVKKVITKLPTHRQSLFFSATMPPDVAKLADTILNNPAKVEVTPVSST 217
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
DT++Q FV + K LV+IL + + S +VF RT + L G A I
Sbjct: 218 ADTIEQAMYFVGKEDKRKLLVHILDDKNIKSALVFARTKHGADKVVKDLLKAGIGAEAIH 277
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G+ SQ+ R AL+ FK+ E +L+ TD+A+RG+D+ + VINY++P + Y+HR+GRT
Sbjct: 278 GNKSQNARQRALSNFKSRETRVLVATDIAARGIDVDELSHVINYELPNIPETYVHRIGRT 337
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
RAG G+A+S + E E+ I KLIGK++P
Sbjct: 338 GRAGHDGIALSFCDAEETEYLRDIHKLIGKRVP 370
>gi|367007110|ref|XP_003688285.1| hypothetical protein TPHA_0N00700 [Tetrapisispora phaffii CBS 4417]
gi|357526593|emb|CCE65851.1| hypothetical protein TPHA_0N00700 [Tetrapisispora phaffii CBS 4417]
Length = 755
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 134/323 (41%), Positives = 205/323 (63%), Gaps = 13/323 (4%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+I A TGSGKT AF +PI++ LL N + + VL+PTRELAIQ+S+ +
Sbjct: 257 GKDIIAGAVTGSGKTAAFMIPIIERLLYKPAN---IASTRVIVLTPTRELAIQVSDVGKR 313
Query: 69 LGSGIS-LRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
+G ++ L + VGG+++ QQ L RP +V+ATPGR +DH+ N+ F++ +++ LV+
Sbjct: 314 IGKYVNGLTFGLAVGGLNLRQQEQELKTRPDVVIATPGRFIDHIRNSASFNVDSVEVLVI 373
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L D F++ L+EI++++P RQT LFSATM K+K+L L+ PV+I
Sbjct: 374 DEADRMLEDGFQEELNEIMSLLPTKRQTLLFSATMNSKIKQLISLSLRRPVRIMINPPKQ 433
Query: 188 TVDTLKQQYRFVPAKYKDC-------YLVYILTEVSASSTMVFTRTCDATRLLALMLRNL 240
L Q+ FV + +D YL+ L S +VF + L +++ L
Sbjct: 434 AAARLTQE--FVRIRKRDLLKPALLYYLIRKLDSSSQKRIVVFVSRKEMAHRLRIIMGLL 491
Query: 241 GQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKD 300
G + + G ++Q +RL ++N+FK+ E +LICTD+ASRGLDIP +++VINYD+P + +
Sbjct: 492 GMKVAELHGSLTQEQRLQSVNQFKSLEVPVLICTDLASRGLDIPKIEVVINYDMPKSYEI 551
Query: 301 YIHRVGRTARAGRTGVAISLVNQ 323
Y+HRVGRTARAGR G +++ V +
Sbjct: 552 YLHRVGRTARAGREGRSVTFVGE 574
>gi|392988049|ref|YP_006486642.1| DEAD/DEAH box helicase [Enterococcus hirae ATCC 9790]
gi|392335469|gb|AFM69751.1| DEAD-box ATP dependent DNA helicase [Enterococcus hirae ATCC 9790]
Length = 503
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 146/345 (42%), Positives = 205/345 (59%), Gaps = 13/345 (3%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+GKD+IG AQTG+GKT AF LP+L+ +I N+ + V++PTRELAIQ E+
Sbjct: 37 SGKDVIGQAQTGTGKTAAFGLPMLE---KIDTNRHELQGL---VIAPTRELAIQTQEELY 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
LG +R + GG D+ +Q L RPHIVV TPGR++DH+ N LGT++ LVL
Sbjct: 91 RLGRDKRVRVQAVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHI-NRHTLKLGTVETLVL 149
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEAD +LN F + ++ I++ +P RQT LFSATM +K + +K+P ++ +K
Sbjct: 150 DEADEMLNMGFLEDIENIISKVPEERQTLLFSATMPPAIKNIGVKFMKSPTHVKIKAKEM 209
Query: 188 TVDTLKQQYRFVPAK-YKDCYLVYILTEVSASS-TMVFTRTCDATRLLALMLRNLGQRAI 245
T D + Q Y V AK Y+ ++ L +V T+VF RT LA L G RA
Sbjct: 210 TADLIDQYY--VRAKEYEKFDIMTRLFDVQTPELTIVFGRTKRRVDELARGLEARGYRAE 267
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G +SQ KR+ L FK G +IL+ TDVA+RGLDI V V NYDIP + + Y+HR+
Sbjct: 268 GIHGDLSQQKRMSVLRSFKNGHLDILVATDVAARGLDISGVTHVYNYDIPQDPESYVHRI 327
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEF--PAEEE 348
GRT RAG+ G++++ V E+ + IE L K++ P E+E
Sbjct: 328 GRTGRAGKGGMSVTFVTPNEMSYLHVIENLTKKRMATLRPPTEKE 372
>gi|17546930|ref|NP_520332.1| ATP-dependent RNA helicase [Ralstonia solanacearum GMI1000]
gi|17429230|emb|CAD15918.1| probable atp-dependent rna helicase protein [Ralstonia solanacearum
GMI1000]
Length = 495
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 206/341 (60%), Gaps = 9/341 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISE 64
AG+D++G AQTG+GKT F+LPI+Q LL A N PA A +L+PTRELA Q+ +
Sbjct: 51 AGRDVMGAAQTGTGKTAGFSLPIIQNLLPDA-NTSASPARHPVRALILTPTRELADQVYD 109
Query: 65 QFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKY 124
+LR AV+ GGVDM QT L + ++VATPGRL+DH+ + +L ++
Sbjct: 110 NVAKYAKHTALRSAVVFGGVDMNPQTEQLRRGVEVLVATPGRLLDHVQQ-RSVNLSQVRM 168
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS 184
LVLDEADR+L+ F L I+N++P RQT LFSAT + ++KKL + L++P IE A
Sbjct: 169 LVLDEADRMLDMGFLPDLQRIINLLPAHRQTLLFSATFSPEIKKLAASYLRHPQTIEVAR 228
Query: 185 KYSTVDTLKQQYRFVPAKYKDCYLVYILTEVS----ASSTMVFTRTCDATRLLALMLRNL 240
+T D ++Q VP +K LV++L + + S +VF+ + LA L
Sbjct: 229 SNATADNVRQVIYTVPDGHKQAALVHLLRQRAEQGLPSQCIVFSNSKIGCSRLARALERE 288
Query: 241 GQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKD 300
A I G +Q++R+ L FK G ++L+ TDVA+RGLDI + VIN+D+P N++D
Sbjct: 289 KINANAIHGDKTQTERMQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAED 348
Query: 301 YIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
Y+HR+GRT RAG +G A+SL + IEKLI + LP
Sbjct: 349 YVHRIGRTGRAGASGDALSLFAPGDERLLADIEKLIKRNLP 389
>gi|300312872|ref|YP_003776964.1| ATP-dependent RNA helicase [Herbaspirillum seropedicae SmR1]
gi|300075657|gb|ADJ65056.1| ATP-dependent RNA helicase protein [Herbaspirillum seropedicae
SmR1]
Length = 487
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 155/386 (40%), Positives = 216/386 (55%), Gaps = 16/386 (4%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFF---ACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT F+LPI+Q LL+ A + + PA A +L+PTRELA Q+++
Sbjct: 53 GRDVMGAAQTGTGKTAGFSLPIIQRLLQHASHSAS-PARHPVRALILTPTRELADQVADN 111
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
A LR V+ GGVDM QT L IV+ATPGRL+DH+ K +L + L
Sbjct: 112 VAAYCRFTPLRSTVVFGGVDMAPQTAILRAGVEIVIATPGRLLDHVQQ-KTVNLSQTQIL 170
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
V+DEADR+L+ F L I+N++P+ RQ LFSAT + ++KKL + NPV IE A
Sbjct: 171 VMDEADRMLDMGFLPDLQRIINLLPKQRQNLLFSATFSPEIKKLAASFQNNPVTIEVARS 230
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+T + + Q V K + +I+ + +VF+ T LA L G +A
Sbjct: 231 NATAENVTQTIYKVEEAAKADAVSFIIRQRELKQVIVFSNTKIGASRLARTLVAEGVKAS 290
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G +QS+R+ AL FK G+ +L+ TDVA+RGLDI + VINYD+P N++DY+HR+
Sbjct: 291 AIHGDKTQSERMAALEAFKQGQIEVLVATDVAARGLDIAELPCVINYDLPYNAEDYVHRI 350
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKL---------PEFPAEEEEVLLLLER 356
GRT RAG +G AISL + IEKLI KK P E + ER
Sbjct: 351 GRTGRAGASGDAISLFCDKDDRLLTDIEKLIKKKFERAELTGFAPRARHERSDRAERGER 410
Query: 357 VTEAKRISQMTIKDSGNKRR--RKGG 380
+R + D G + R R+GG
Sbjct: 411 SERGERSDRGDRSDRGERSRSSREGG 436
>gi|281351106|gb|EFB26690.1| hypothetical protein PANDA_000812 [Ailuropoda melanoleuca]
Length = 703
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 139/329 (42%), Positives = 198/329 (60%), Gaps = 6/329 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+ A TG+GKT AFALP+L+ L+ R P VL PTREL IQ+ +
Sbjct: 192 GKDICACAATGTGKTAAFALPVLERLIY---KPRQAPVTRVLVLVPTRELGIQVHSVTKQ 248
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L ++ + VGG+D+ Q AL P I++ATPGRL+DHL N F L +++ L+LD
Sbjct: 249 LAQFCNITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILD 308
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L++ FE+ + EI+ + RQT LFSATMT +VK L LKNPV+I S
Sbjct: 309 EADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDV 368
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
L+Q++ R P + D + +LT M+FT+T + ++L +G +
Sbjct: 369 APFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVG 428
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G++SQ++RL AL +FK + +IL+ TDVA+RGLDI V VIN+ +P K Y+HRV
Sbjct: 429 ELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRV 488
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEK 334
GRTARAGR G ++SLV + E + +I K
Sbjct: 489 GRTARAGRAGRSVSLVGEEERKMLKEIVK 517
>gi|407014444|gb|EKE28458.1| hypothetical protein ACD_3C00056G0002 [uncultured bacterium (gcode
4)]
Length = 415
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 143/336 (42%), Positives = 202/336 (60%), Gaps = 7/336 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQAL---LEIAENQRTVPAFFACVLSPTRELAIQISEQ 65
G+D++G AQTG+GKT AFA+P LQ L E++ RT+ + +L+PTRELAIQI E
Sbjct: 38 GRDVLGSAQTGTGKTAAFAIPTLQILSRERELSNQPRTIKSL---ILTPTRELAIQIEES 94
Query: 66 FEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYL 125
F A + LR AV+ V+ Q L K I+VATP RL+D L N L T++
Sbjct: 95 FTAYWKNLWLRHAVIFWWVNQHAQVERLKKWIDILVATPWRLLD-LMNQWFVKLNTVEIF 153
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
+LDEADR+LN F + ++L +P +QT FSATM K++ L + L NPVK+E A
Sbjct: 154 ILDEADRMLNMWFINDVKKVLTKLPAKKQTLFFSATMPKEISSLADSILVNPVKVEVAPI 213
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
ST DT++Q FV K L +L + +S +VF+RT + L A
Sbjct: 214 SSTADTVRQAIYFVKKNDKKLLLASLLKSPTIASVLVFSRTKHWADRIVKDLEKAWIAAE 273
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
I G+ SQ+ R AL FK+G+ +L+ TD+A+R +D+ ++ V+NYD+P S+ Y+HR+
Sbjct: 274 AIHGNKSQNARQRALGNFKSGQTRVLVATDIAARWIDVDNLSHVVNYDLPNESETYVHRI 333
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP 341
GRT RAG GVAIS Q E+E+ + IEKL+GK +P
Sbjct: 334 GRTWRAGNNGVAISFCEQDEVEYLVDIEKLLGKPIP 369
>gi|301754403|ref|XP_002913034.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like
[Ailuropoda melanoleuca]
Length = 764
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 139/329 (42%), Positives = 198/329 (60%), Gaps = 6/329 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+ A TG+GKT AFALP+L+ L+ R P VL PTREL IQ+ +
Sbjct: 223 GKDICACAATGTGKTAAFALPVLERLIY---KPRQAPVTRVLVLVPTRELGIQVHSVTKQ 279
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
L ++ + VGG+D+ Q AL P I++ATPGRL+DHL N F L +++ L+LD
Sbjct: 280 LAQFCNITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILD 339
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+L++ FE+ + EI+ + RQT LFSATMT +VK L LKNPV+I S
Sbjct: 340 EADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDV 399
Query: 189 VDTLKQQY-RFVPAKYKD--CYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
L+Q++ R P + D + +LT M+FT+T + ++L +G +
Sbjct: 400 APFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVG 459
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G++SQ++RL AL +FK + +IL+ TDVA+RGLDI V VIN+ +P K Y+HRV
Sbjct: 460 ELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRV 519
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEK 334
GRTARAGR G ++SLV + E + +I K
Sbjct: 520 GRTARAGRAGRSVSLVGEEERKMLKEIVK 548
>gi|410671946|ref|YP_006924317.1| DEAD/DEAH box helicase-like protein [Methanolobus psychrophilus
R15]
gi|409171074|gb|AFV24949.1| DEAD/DEAH box helicase-like protein [Methanolobus psychrophilus
R15]
Length = 408
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 137/328 (41%), Positives = 201/328 (61%), Gaps = 4/328 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAF-FACVLSPTRELAIQISEQFE 67
GKDLIG+AQTG+GKT AF LPILQ + E +++ T P F VL+PTRELA QI + F
Sbjct: 38 GKDLIGIAQTGTGKTAAFVLPILQRMHE--KHKHTTPGFPRVLVLAPTRELAAQIGDSFA 95
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
A G + + V+ GGV + Q ++ K I+VATPGRL+D L + L +++ VL
Sbjct: 96 AYGHFLHFKHTVVFGGVSQVPQFKSITKGVDILVATPGRLLD-LMDQGIVKLSGVEFFVL 154
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR+L+ F K ++ I++++P RQ+ FSATM+ ++ +L R L +PV++E + +
Sbjct: 155 DEADRMLDMGFIKDVNRIVSMLPHKRQSLFFSATMSPQISELTRRLLTDPVRVEVTPQAT 214
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV+ ++Q+ FV + KD L+ +L + + +VFTRT +A L A I
Sbjct: 215 TVERIEQKVFFVDQENKDALLLSLLQQDHLNCVLVFTRTKHRANKVAQTLNKNRVGADAI 274
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G+ SQ+ R + F+AGE +L+ TD+A+RG+DI + VINYD+P + Y+HR+GR
Sbjct: 275 HGNKSQAHRTRVMESFRAGELQVLVATDIAARGIDIEDISHVINYDLPNEPESYVHRIGR 334
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKL 335
TARAG G A S E + IEKL
Sbjct: 335 TARAGAEGTAYSFCAADERSFLRSIEKL 362
>gi|407409979|gb|EKF32597.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi
marinkellei]
Length = 499
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 152/401 (37%), Positives = 239/401 (59%), Gaps = 40/401 (9%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGK ++G A TGSGKT AFALP+LQ L E + FA VL+P+RELA QI +QF
Sbjct: 38 AGKCVVGGAATGSGKTAAFALPVLQILAE------DLYGVFALVLTPSRELAYQIVDQFV 91
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRL---MDHLTNTKGFSLGTLKY 124
ALG+ + +R A+++GG+ QQ AL RPH+VVATPGRL ++ + L L++
Sbjct: 92 ALGAPLHIRTAIIIGGLPHEQQLDALKARPHVVVATPGRLKFMLEKFPEARKAFLH-LRF 150
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIPRMR---QTYLFSATMTKKVKKLQRACLKNPVKIE 181
LVLDEADRL +DD E ++E++ ++P R + LF+AT+ +++ +++ + I
Sbjct: 151 LVLDEADRLTSDDIETDVEEVVRLLPPARPERRVLLFTATLEQRLTRVEEGGWLVRLGIT 210
Query: 182 AASK-----------------------YSTVDTLKQQYRFVPAKYKDCYLV-YILTEVSA 217
A++ Y+ ++LKQ+Y F+P K YLV I +
Sbjct: 211 PAAQHLEVFATNTMVTVADDNGATTESYAFAESLKQRYLFIPNMVKLAYLVASIRAAGTE 270
Query: 218 SSTMVFTRTCDATRLLALMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVA 277
ST+VFT +C ++ L L+ LG ++ +SQ R+ L FK G IL+ TD+A
Sbjct: 271 QSTIVFTNSCMRCEVVRLTLQLLGFPVCSLNSVISQKHRVDNLATFKLGIARILVATDIA 330
Query: 278 SRGLDIPSVDMVINYDIPTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIG 337
SRGLDIP+V +V++YD+P Y+HRVGRTARAGR G++++ V++Y+++ ++E+ +
Sbjct: 331 SRGLDIPAVGLVLHYDLPKQLSTYLHRVGRTARAGREGLSVAFVSEYDVDLVRRLERKMN 390
Query: 338 KKLPEFPAE---EEEVLLLLERVTEAKRISQMTIKDSGNKR 375
+ + A+ E+EVL LL+ V+ AK +++ ++D +R
Sbjct: 391 CTMTLWKAKGVNEKEVLKLLDEVSAAKVQAKIQVEDQFGRR 431
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,789,423,537
Number of Sequences: 23463169
Number of extensions: 231734196
Number of successful extensions: 803326
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 34268
Number of HSP's successfully gapped in prelim test: 5804
Number of HSP's that attempted gapping in prelim test: 679255
Number of HSP's gapped (non-prelim): 49872
length of query: 401
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 256
effective length of database: 8,957,035,862
effective search space: 2293001180672
effective search space used: 2293001180672
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)