BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015759
(401 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GY84|RH10_ARATH DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis thaliana
GN=RH10 PE=2 SV=2
Length = 456
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/405 (76%), Positives = 359/405 (88%), Gaps = 8/405 (1%)
Query: 3 LWFCDAGKDLIGLAQTGSGKTGAFALPILQALLEIA------ENQRTVPAFFACVLSPTR 56
L F GKD+IGLAQTGSGKTGAFA+PILQALLE + +R PAFFACVLSPTR
Sbjct: 40 LPFALEGKDVIGLAQTGSGKTGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTR 99
Query: 57 ELAIQISEQFEALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKG 116
ELAIQI+EQFEALG+ ISLRCAVLVGG+D MQQT+ALGKRPH++VATPGRL DH+++TKG
Sbjct: 100 ELAIQIAEQFEALGADISLRCAVLVGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKG 159
Query: 117 FSLGTLKYLVLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKN 176
FSL +LKYLVLDEADRLLN+DFEKSL++IL IP R+T+LFSATMTKKV+KLQRACL+N
Sbjct: 160 FSLKSLKYLVLDEADRLLNEDFEKSLNQILEEIPLERKTFLFSATMTKKVRKLQRACLRN 219
Query: 177 PVKIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALM 236
PVKIEAASKYSTVDTLKQQYRFV AKYKDCYLVYIL+E+ S++M+FTRTCD TR LAL+
Sbjct: 220 PVKIEAASKYSTVDTLKQQYRFVAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALV 279
Query: 237 LRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPT 296
LR+LG RAIPISG M+QSKRLGALNKFKAGECNIL+CTDVASRGLDIPSVD+VINYDIPT
Sbjct: 280 LRSLGFRAIPISGQMTQSKRLGALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPT 339
Query: 297 NSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLER 356
NSKDYIHRVGRTARAGR+GV ISLVNQYELEWY+QIEKLIGKKLPE+PAEE+EVL LLER
Sbjct: 340 NSKDYIHRVGRTARAGRSGVGISLVNQYELEWYIQIEKLIGKKLPEYPAEEDEVLSLLER 399
Query: 357 VTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKKLSKRK 401
V EAK++S M +K+SG ++RR G++D++ R G NK + +K +
Sbjct: 400 VAEAKKLSAMNMKESGGRKRR--GEDDEESERFLGGNKDRGNKER 442
>sp|Q7Y183|RH10_ORYSJ DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa subsp.
japonica GN=Os03g0669000 PE=2 SV=1
Length = 472
Score = 531 bits (1368), Expect = e-150, Method: Compositional matrix adjust.
Identities = 260/395 (65%), Positives = 320/395 (81%), Gaps = 6/395 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGL QTGSGKTGAFALPI+QALL+ + Q A FACVLSPTRELA QI +QFEA
Sbjct: 78 GRDLIGLGQTGSGKTGAFALPIIQALLKQDKPQ----ALFACVLSPTRELAFQIGQQFEA 133
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I L C VLVGGVD +QQ ++L KRPHIVV TPGRL+DHLT+TKGFSL LKYLVLD
Sbjct: 134 LGSAIGLSCTVLVGGVDRVQQAVSLAKRPHIVVGTPGRLLDHLTDTKGFSLNKLKYLVLD 193
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD+LLN +F+K+LD+ILNVIP+ R+T+LFSATMT KV KLQRACL+NPVK+E ASKYST
Sbjct: 194 EADKLLNVEFQKALDDILNVIPKERRTFLFSATMTNKVSKLQRACLRNPVKVEVASKYST 253
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTL+Q++ FVPA YKDC+LV++L E+ S M+F RTC++TRLLAL LRNL +AI IS
Sbjct: 254 VDTLRQEFYFVPADYKDCFLVHVLNELPGSMIMIFVRTCESTRLLALTLRNLRFKAISIS 313
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ KRLGALN+FK +CNILICTDVASRGLDI VD+VINYDIP NSKDY+HRVGRT
Sbjct: 314 GQMSQDKRLGALNRFKTKDCNILICTDVASRGLDIQGVDVVINYDIPMNSKDYVHRVGRT 373
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG TG A+SLVNQYE W+ IEKL+G ++P+ + E+++L ER++++KRI+ T+
Sbjct: 374 ARAGNTGYAVSLVNQYEAMWFKMIEKLLGYEIPDRKVDNAEIMILRERISDSKRIALTTM 433
Query: 369 KDSGN--KRRRKGGDEDDDIGRQFGINKKKLSKRK 401
K+ G K+RRK D++++ R +++K S K
Sbjct: 434 KEGGGHKKKRRKNEDDEEEEERNAPVSRKSKSFNK 468
>sp|Q9CWX9|DDX47_MOUSE Probable ATP-dependent RNA helicase DDX47 OS=Mus musculus GN=Ddx47
PE=2 SV=2
Length = 455
Score = 519 bits (1336), Expect = e-146, Method: Compositional matrix adjust.
Identities = 255/400 (63%), Positives = 318/400 (79%), Gaps = 14/400 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+D M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 235 VEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP ++EEV++L ERV EA+R ++M +
Sbjct: 355 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDEEVMMLTERVNEAQRFARMEL 414
Query: 369 KDSGNKRRRK---GGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++RK GD+DD G G+ K K+ KRK
Sbjct: 415 REHGEKKKRKREDAGDDDDKEG-AIGVRNKVAGGKMKKRK 453
>sp|Q29S22|DDX47_BOVIN Probable ATP-dependent RNA helicase DDX47 OS=Bos taurus GN=DDX47
PE=2 SV=1
Length = 457
Score = 517 bits (1331), Expect = e-146, Method: Compositional matrix adjust.
Identities = 252/399 (63%), Positives = 317/399 (79%), Gaps = 12/399 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 63 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 116
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+D M Q+LAL K+PHIV+ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 117 LGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMD 176
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 177 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 236
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 237 VEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 296
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 297 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 356
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERVTEA+R ++M +
Sbjct: 357 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMEL 416
Query: 369 KDSGNKRRRKGGD--EDDDIGRQFGINKK----KLSKRK 401
++ G K++R D ++DD G+ K K+ KRK
Sbjct: 417 REHGEKKKRSREDVGDNDDTEGAIGVRNKVAGGKMKKRK 455
>sp|Q9H0S4|DDX47_HUMAN Probable ATP-dependent RNA helicase DDX47 OS=Homo sapiens GN=DDX47
PE=1 SV=1
Length = 455
Score = 511 bits (1315), Expect = e-144, Method: Compositional matrix adjust.
Identities = 251/400 (62%), Positives = 315/400 (78%), Gaps = 14/400 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKTGAFALPIL ALLE + FA VL+PTRELA QISEQFEA
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQR------LFALVLTPTRELAFQISEQFEA 114
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++ AV+VGG+D M Q+LAL K+PHI++ATPGRL+DHL NTKGF+L LKYLV+D
Sbjct: 115 LGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMD 174
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE +D+IL VIPR R+T+LFSATMTKKV+KLQRA LKNPVK +SKY T
Sbjct: 175 EADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQT 234
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V+ L+Q Y F+P+K+KD YLVYIL E++ +S M+F TC+ T+ AL+LRNLG AIP+
Sbjct: 235 VEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQSKRLG+LNKFKA +IL+ TDVASRGLDIP VD+V+N+DIPT+SKDYIHRVGRT
Sbjct: 295 GQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRT 354
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AI+ V QY++E + +IE LIGKKLP FP +++EV++L ERV EA+R ++M +
Sbjct: 355 ARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMEL 414
Query: 369 KDSGNKRRRK---GGDEDDDIGRQFGINKK----KLSKRK 401
++ G K++R GD DD G G+ K K+ KRK
Sbjct: 415 REHGEKKKRSREDAGDNDDTEG-AIGVRNKVAGGKMKKRK 453
>sp|P34580|DDX47_CAEEL Putative ATP-dependent RNA helicase T26G10.1 OS=Caenorhabditis
elegans GN=T26G10.1 PE=3 SV=1
Length = 489
Score = 481 bits (1239), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/388 (60%), Positives = 299/388 (77%), Gaps = 14/388 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLA+TGSGKTGAFA+P+LQ+LL+ + AFF VL+PTRELA QI +QFEA
Sbjct: 81 GKDVIGLAETGSGKTGAFAIPVLQSLLDHPQ------AFFCLVLTPTRELAFQIGQQFEA 134
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI L AV+VGGVDM Q +AL +RPHI+VATPGRL+DHL NTKGF+L LK+L++D
Sbjct: 135 LGSGIGLIAAVIVGGVDMAAQAMALARRPHIIVATPGRLVDHLENTKGFNLKALKFLIMD 194
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADR+LN DFE LD+IL VIPR R+TYLFSATMTKKV KL+RA L++P ++ +S+Y T
Sbjct: 195 EADRILNMDFEVELDKILKVIPRERRTYLFSATMTKKVSKLERASLRDPARVSVSSRYKT 254
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VD LKQ Y FVP KYK+ YLVY+L E + +S +VF TC T +A+MLR LG +A+P+
Sbjct: 255 VDNLKQHYIFVPNKYKETYLVYLLNEHAGNSAIVFCATCATTMQIAVMLRQLGMQAVPLH 314
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G MSQ KRLG+LNKFK+ IL+CTDVA+RGLDIP VDMVINYD+P+ SKDY+HRVGRT
Sbjct: 315 GQMSQEKRLGSLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRT 374
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G+AI++V QY++E Y +IE +GKKL E+ E EV++L+ER EA +++ +
Sbjct: 375 ARAGRSGIAITVVTQYDVEAYQKIEANLGKKLDEYKCVENEVMVLVERTQEATENARIEM 434
Query: 369 KD------SGNKRRRKG--GDEDDDIGR 388
K+ SG KRR+ GD ++ GR
Sbjct: 435 KEMDEKKKSGKKRRQNDDFGDTEESGGR 462
>sp|Q54VT4|DDX47_DICDI Probable ATP-dependent RNA helicase ddx47 OS=Dictyostelium
discoideum GN=ddx47 PE=3 SV=1
Length = 546
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 224/380 (58%), Positives = 287/380 (75%), Gaps = 8/380 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLAQTGSGKT AF +P+LQ LLE + F L+PTRELA QI++QF A
Sbjct: 156 GRDIIGLAQTGSGKTAAFVIPVLQKLLEAPQ------GLFCLALAPTRELAYQIADQFNA 209
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+GS I ++ VLVGG+D M Q+LAL K+PH+VV +PGR++ HL +TKGF+L ++KY ++D
Sbjct: 210 IGSTIGVKTCVLVGGIDSMSQSLALAKKPHVVVGSPGRVLHHLEHTKGFNLRSIKYFIMD 269
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRL + DFE+ ++ IL VIP+ R TYLFSATMT KV KLQRA L NPVK++ ASKY T
Sbjct: 270 EADRLFSADFEEEVNNILKVIPKERNTYLFSATMTSKVAKLQRASLVNPVKVQVASKYQT 329
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
VDTL QQY FVP KYKDCYL YIL E++ + T++FT TC ++ +A+MLRNLG AIPI+
Sbjct: 330 VDTLLQQYLFVPFKYKDCYLAYILNELAGNLTIIFTSTCASSTKIAMMLRNLGFGAIPIN 389
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M Q KRL +LNKFK G +IL+ TDVA+RGLDIPSVD+VINYD+PTNSK+Y+HRVGRT
Sbjct: 390 GDMDQGKRLASLNKFKQGTKSILVATDVAARGLDIPSVDLVINYDVPTNSKEYVHRVGRT 449
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG +G AI++V QY++E Y +IE ++ KKL FP +EE VL+ LERV EA RI+ +
Sbjct: 450 ARAGNSGRAITIVTQYDVEMYQRIEFVLKKKLDSFPCQEETVLIFLERVQEAHRIATNEL 509
Query: 369 KDSG--NKRRRKGGDEDDDI 386
KD + R GD + I
Sbjct: 510 KDKNYSSSSDRHSGDSEGSI 529
>sp|Q4IFI0|RRP3_GIBZE ATP-dependent rRNA helicase RRP3 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=RRP3 PE=3
SV=1
Length = 486
Score = 464 bits (1195), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/372 (60%), Positives = 293/372 (78%), Gaps = 7/372 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKT AFALP+LQALL+ + F VL+PTRELA QI + FEA
Sbjct: 97 GRDIIGLAETGSGKTAAFALPVLQALLDKPQ------PLFGLVLAPTRELATQIGQAFEA 150
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS ISLRCAV+VGG+DM+ Q +ALGK+PHIVVATPGRL+DHL TKGFSL TLKYL++D
Sbjct: 151 LGSLISLRCAVIVGGLDMVPQAIALGKKPHIVVATPGRLVDHLEKTKGFSLRTLKYLIMD 210
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF S+D+IL +PR R+TYLFSAT++ K++ LQRA L++PVK+ +S KY
Sbjct: 211 EADRLLDMDFGPSIDKILKFVPRERRTYLFSATISSKIESLQRASLRDPVKVSISSNKYQ 270
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P KD +L+Y++ E + ST+VFTRT T+ ++++LR LG AIP+
Sbjct: 271 TVSTLLQNYLFIPHPQKDVHLIYLINEHAGQSTIVFTRTVWETQRVSILLRTLGFGAIPL 330
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGALNKF++G +IL+ TDVA+RGLDIPSVD+V+NYD+P +SK YIHRVGR
Sbjct: 331 HGQLSQSSRLGALNKFRSGTRDILVATDVAARGLDIPSVDVVLNYDLPQDSKTYIHRVGR 390
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++GVAISLV QY+LE YL+IE +GKKL E+P E+EEV+ RV EA+RI+++
Sbjct: 391 TARAGKSGVAISLVTQYDLEIYLRIEAALGKKLAEYPTEKEEVMAFQSRVEEAQRIARIE 450
Query: 368 IKDSGNKRRRKG 379
+K +R +KG
Sbjct: 451 MKSFTEERGKKG 462
>sp|Q4WJE9|RRP3_ASPFU ATP-dependent rRNA helicase rrp3 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rrp3
PE=3 SV=1
Length = 472
Score = 464 bits (1194), Expect = e-130, Method: Compositional matrix adjust.
Identities = 228/388 (58%), Positives = 301/388 (77%), Gaps = 15/388 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQAL+E + +FF +L+PTRELA QIS+ FE+
Sbjct: 89 GRDLIGLAETGSGKTAAFALPILQALMENPQ------SFFGLILAPTRELAFQISKSFES 142
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I++RCAV+VGG+DM+ Q++ALGK+PHI+VATPGRL+DHL NTKGFSL TLKYLV+D
Sbjct: 143 LGSTINVRCAVIVGGMDMVSQSIALGKKPHIIVATPGRLLDHLENTKGFSLRTLKYLVMD 202
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF LD+IL V+PR R+T+LFSATM+ KV+ LQRA L NP+++ +S KY
Sbjct: 203 EADRLLDMDFGPLLDKILKVLPRERRTFLFSATMSSKVESLQRASLSNPLRVSVSSNKYQ 262
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P K+KD YLVY+L E ST++FTRT T+ ++ +LR+LG AIP+
Sbjct: 263 TVSTLLQSYLFLPHKHKDIYLVYLLNEFVGQSTIIFTRTVHETQRISFLLRSLGFGAIPL 322
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL KF++ +IL+ TDVA+RGLDIPSVD+V+N+D+PT+SK Y+HRVGR
Sbjct: 323 HGQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGR 382
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++GVAIS V QY++E +L+IE +GKKL E+ E++EV++L ERV EA+R + M
Sbjct: 383 TARAGKSGVAISFVTQYDVEIWLRIEGALGKKLKEYELEKDEVMVLAERVGEAQRQAIME 442
Query: 368 IKDSGNKRRRKGGDEDDDIGRQFGINKK 395
+K+ KR K ++FG K+
Sbjct: 443 MKNFDEKRGTK--------AKKFGKGKR 462
>sp|A1CR32|RRP3_ASPCL ATP-dependent rRNA helicase rrp3 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=rrp3 PE=3 SV=1
Length = 473
Score = 461 bits (1186), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/367 (60%), Positives = 292/367 (79%), Gaps = 7/367 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+DLIGLA+TGSGKT AFALPILQAL++ ++ FF VL+PTRELA QIS+ FEAL
Sbjct: 91 RDLIGLAETGSGKTAAFALPILQALMDKPQS------FFGLVLAPTRELAFQISQSFEAL 144
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GS I++RCAV+VGG+DM+ Q++ALGK+PHI+VATPGRL+DHL NTKGFSL TLKYLV+DE
Sbjct: 145 GSTINVRCAVIVGGMDMVSQSIALGKKPHIIVATPGRLLDHLENTKGFSLRTLKYLVMDE 204
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYST 188
ADRLL+ DF LD+IL ++PR R+T+LFSATM+ KV+ LQRA L NP+++ +S KY T
Sbjct: 205 ADRLLDMDFGPLLDKILKILPRERRTFLFSATMSSKVESLQRASLSNPLRVSVSSNKYQT 264
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q YRF+P K+KD YLVY+L E S ++FTRT T+ ++ +LR LG AIP+
Sbjct: 265 VSTLLQSYRFIPHKHKDIYLVYLLNEFVGQSAIIFTRTVHETQRISFLLRALGFGAIPLH 324
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS RLGAL KF++ +IL+ TDVA+RGLDIPSVD+V+N+D+PT+SK Y+HRVGRT
Sbjct: 325 GQLSQSSRLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGRT 384
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG++GVAIS V QY++E +L+IE +GKKL E+ E++EV++L ERV EA+R + M +
Sbjct: 385 ARAGKSGVAISFVTQYDVEIWLRIEGALGKKLDEYDLEKDEVMVLAERVGEAQRQAIMEM 444
Query: 369 KDSGNKR 375
K+ K+
Sbjct: 445 KNFDEKK 451
>sp|Q6CH58|RRP3_YARLI ATP-dependent rRNA helicase RRP3 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=RRP3 PE=3 SV=1
Length = 480
Score = 460 bits (1184), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/386 (59%), Positives = 293/386 (75%), Gaps = 11/386 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLAQTGSGKT AFA+P+LQ+L E + + VL+PTRELA QISE FEA
Sbjct: 101 GRDIIGLAQTGSGKTAAFAIPVLQSLYENPQ------PLYCVVLAPTRELAYQISETFEA 154
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + LR AV+VGG++MM Q +AL K+PH++VATPGRL+DHL NTKGFSL TLK+LV+D
Sbjct: 155 LGSAMGLRTAVVVGGMNMMTQAVALSKKPHVIVATPGRLVDHLENTKGFSLRTLKFLVMD 214
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ +F SLD+IL VIPR R TYLFSATMT KV+KLQRA L +PV++ ++KY T
Sbjct: 215 EADRLLDMEFGPSLDKILKVIPRQRNTYLFSATMTSKVEKLQRASLVDPVRVAVSTKYQT 274
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
D L Q F P K+KD +LVY+++E + +S ++F RT T+ ++L+LRNLG AIP+
Sbjct: 275 ADNLLQYMVFCPFKHKDTHLVYLVSENAGNSMIIFARTKSDTQRISLLLRNLGYGAIPLH 334
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQ+ RLGALNKFK+G NILI TDVASRGLDIP+VD+VINYDIP++SK YIHRVGRT
Sbjct: 335 GDLSQTARLGALNKFKSGSRNILIATDVASRGLDIPAVDLVINYDIPSDSKSYIHRVGRT 394
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR--ISQM 366
ARAGR G +++LV+QY+LE YL+IE +GKKL +P E E V+L ERV EA R I +M
Sbjct: 395 ARAGRAGKSVALVSQYDLELYLRIEGALGKKLDSYPLESEAVMLFSERVAEASRAAIQEM 454
Query: 367 TIKDSGNKRR---RKGGDEDDDIGRQ 389
+D KR +K ++ DIG Q
Sbjct: 455 KGEDGTKKRSKFDKKRRRDEMDIGEQ 480
>sp|A1D405|RRP3_NEOFI ATP-dependent rRNA helicase rrp3 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=rrp3
PE=3 SV=1
Length = 472
Score = 460 bits (1183), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/388 (58%), Positives = 300/388 (77%), Gaps = 15/388 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQAL+E ++ FF +L+PTRELA QIS+ FE+
Sbjct: 89 GRDLIGLAETGSGKTAAFALPILQALMEKPQS------FFGLILAPTRELAFQISKSFES 142
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I++RCAV+VGG+DM+ Q++ALGK+PHI+VATPGRL+DHL NTKGFSL TLKYLV+D
Sbjct: 143 LGSTINVRCAVIVGGMDMVSQSIALGKKPHIIVATPGRLLDHLENTKGFSLRTLKYLVMD 202
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF LD+IL V+PR R+T+LFSATM+ KV+ LQRA L NP+++ +S KY
Sbjct: 203 EADRLLDMDFGPLLDKILKVLPRERRTFLFSATMSSKVESLQRASLSNPLRVSVSSNKYQ 262
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P K+KD YLVY+L E S ++FTRT T+ ++ +LR+LG AIP+
Sbjct: 263 TVSTLLQSYLFLPHKHKDIYLVYLLNEFVGQSAIIFTRTVHETQRISFLLRSLGFGAIPL 322
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL KF++ +IL+ TDVA+RGLDIPSVD+V+N+D+PT+SK Y+HRVGR
Sbjct: 323 HGQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGR 382
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++GVAIS V QY++E +L+IE +GKKL E+ E++EV++L ERV EA+R + +
Sbjct: 383 TARAGKSGVAISFVTQYDVEIWLRIEGALGKKLKEYELEKDEVMVLAERVGEAQRQAIVE 442
Query: 368 IKDSGNKRRRKGGDEDDDIGRQFGINKK 395
+K+ KR K ++FG K+
Sbjct: 443 MKNFDEKRGTK--------AKKFGKGKR 462
>sp|A6QRQ7|RRP3_AJECN ATP-dependent rRNA helicase RRP3 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=RRP3 PE=3 SV=1
Length = 485
Score = 459 bits (1180), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/373 (60%), Positives = 293/373 (78%), Gaps = 7/373 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQAL+ ++ F +L+PTRELA QISE FEA
Sbjct: 96 GRDLIGLAETGSGKTAAFALPILQALMNKPQS------LFGLILAPTRELACQISEAFEA 149
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS IS+RCAV+VGG+DM+ Q ++LGK+PHI+VATPGRL+DHL NTKGFSL +LKYLV+D
Sbjct: 150 LGSLISVRCAVIVGGMDMVSQAISLGKKPHIIVATPGRLLDHLENTKGFSLRSLKYLVMD 209
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF LD+IL V+PR R+TYLFSATM+ KV+ LQRA L NP+++ +S KY
Sbjct: 210 EADRLLDLDFGPILDKILKVLPRERRTYLFSATMSSKVESLQRASLSNPLRVSISSNKYQ 269
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P KYKD YLVY+L E + S +VFTRT + T+ LA++LR LG +IP+
Sbjct: 270 TVATLLQSYLFIPHKYKDIYLVYLLNEYAGQSAIVFTRTVNETQRLAILLRALGFGSIPL 329
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL+KF++ +IL+ TDVA+RGLDIPSVD+V+N+D+P++SK YIHRVGR
Sbjct: 330 HGQLSQSSRLGALSKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPSDSKTYIHRVGR 389
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G A S+V QY++E +L+IE +GKKL E+ E+EEV++L +RV EA+R +
Sbjct: 390 TARAGKSGHAFSIVTQYDIEVWLRIENALGKKLDEYKVEKEEVMVLSDRVGEAQRHAITE 449
Query: 368 IKDSGNKRRRKGG 380
+KD KR +G
Sbjct: 450 MKDLHEKRGSRGA 462
>sp|Q4P3U9|RRP3_USTMA ATP-dependent rRNA helicase RRP3 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=RRP3 PE=3 SV=1
Length = 551
Score = 457 bits (1177), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/378 (60%), Positives = 286/378 (75%), Gaps = 15/378 (3%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IGLAQTGSGKT AF +PILQAL + + FFACVL+PTRELA QIS+Q EAL
Sbjct: 142 RDVIGLAQTGSGKTAAFTIPILQALWDNPK------PFFACVLAPTRELAYQISQQVEAL 195
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GS I +R A +VGG+DMM Q++AL KRPH++VATPGRL DHL NTKGFSL L+YLV+DE
Sbjct: 196 GSTIGVRSATIVGGMDMMSQSIALSKRPHVIVATPGRLQDHLENTKGFSLRGLQYLVMDE 255
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADRLL+ DF +D++L IPR R+T LFSATMT KV KLQRA LKNPV++E +KY+TV
Sbjct: 256 ADRLLDMDFGPIIDKLLQSIPRERRTMLFSATMTTKVAKLQRASLKNPVRVEVDTKYTTV 315
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
TLKQ Y F+P +KD YLV++ E + S +VFTRT ++ L+++LR LG AIP+ G
Sbjct: 316 STLKQHYMFMPFAHKDTYLVHLANEQAGHSIIVFTRTVHDSQRLSILLRLLGFPAIPLHG 375
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+SQ RLGALNKFK G +IL+ TDVASRGLDIP+VD+V+NYDIPTNSKDYIHRVGRTA
Sbjct: 376 QLSQQARLGALNKFKTGGRSILVATDVASRGLDIPAVDLVVNYDIPTNSKDYIHRVGRTA 435
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPA--EEEEVLLLLERVTEAKRISQMT 367
RAGR+G +++LV QY++E +IE +IG K+ EFP ++E V+LL ERV EA R +
Sbjct: 436 RAGRSGRSVTLVTQYDVELLQRIEAVIGLKMTEFPGGNDKEAVMLLSERVAEAHRAAVRE 495
Query: 368 IKDSG-------NKRRRK 378
+KD G KR+RK
Sbjct: 496 LKDKGVGSAGGSGKRKRK 513
>sp|Q2UNB7|RRP3_ASPOR ATP-dependent rRNA helicase rrp3 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=rrp3 PE=3 SV=1
Length = 472
Score = 457 bits (1175), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/372 (59%), Positives = 292/372 (78%), Gaps = 7/372 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQAL++ + FF VL+PTRELA QIS+ FE
Sbjct: 89 GRDLIGLAETGSGKTAAFALPILQALMDKPSS------FFGLVLAPTRELAYQISQAFEG 142
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS IS+R VLVGG+DM+ Q++ALGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+D
Sbjct: 143 LGSTISVRSTVLVGGMDMVSQSIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMD 202
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYS 187
EADRLL+ DF LD+IL V+PR R+TYLFSATM+ KV+ LQRA L+NP+++ ++SK+
Sbjct: 203 EADRLLDMDFGPILDKILKVLPRERRTYLFSATMSSKVESLQRASLQNPLRVAVSSSKFQ 262
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL+Q Y F+P K+KD YLVY+L E S ++F RT T+ L+ LR LG AIP+
Sbjct: 263 TVSTLQQSYIFIPHKHKDLYLVYLLNEFVGQSCIIFCRTVHETQRLSFFLRLLGFGAIPL 322
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL KF++ +IL+ TDVA+RGLDIPSVD+V+N+D+P +SK +IHR+GR
Sbjct: 323 HGQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPGDSKTFIHRIGR 382
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++GVAIS QY++E +L+IE +GKKLPE+PAE++EV++L ERV+EA+R + +
Sbjct: 383 TARAGKSGVAISFATQYDVEAWLRIEGALGKKLPEYPAEKDEVMVLAERVSEAQRSAILE 442
Query: 368 IKDSGNKRRRKG 379
+K+ K+ +G
Sbjct: 443 MKNYDEKKGSRG 454
>sp|A6RW56|RRP3_BOTFB ATP-dependent rRNA helicase rrp3 OS=Botryotinia fuckeliana (strain
B05.10) GN=rrp3 PE=3 SV=1
Length = 486
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/373 (59%), Positives = 292/373 (78%), Gaps = 7/373 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQALL+ + F VL+PTRELA QIS+QFEA
Sbjct: 97 GRDLIGLAETGSGKTAAFALPILQALLDKPQ------PLFGLVLAPTRELAYQISQQFEA 150
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+DM+ Q++ALGK+PHI+VATPGRL+DHL NTKGFSL +LKYLV+D
Sbjct: 151 LGSVIRVKCAVIVGGMDMVPQSIALGKKPHIIVATPGRLLDHLENTKGFSLRSLKYLVMD 210
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF LD+IL V+PR R+TYLFSAT++ KV+ LQRA LK+P+++ +S KY
Sbjct: 211 EADRLLDLDFGPILDKILKVLPRERRTYLFSATISSKVESLQRASLKDPLRVSISSNKYQ 270
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P +KD YL+Y+L E + S ++FTRT + T+ +A++LR LG AIP+
Sbjct: 271 TVSTLIQNYIFIPLIHKDTYLIYLLNEFAGQSAIIFTRTVNETQRIAILLRTLGFGAIPL 330
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGALNKF+AG IL+ TDVA+RGLDIPSVD+V+NYD+P +SK YIHRVGR
Sbjct: 331 HGQLSQSSRLGALNKFRAGSREILVATDVAARGLDIPSVDVVLNYDVPQDSKTYIHRVGR 390
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G AIS+V QY+LE +++IE +GKK E+P ++EV++ RV EA+R ++
Sbjct: 391 TARAGKSGHAISVVTQYDLEIFMRIEAALGKKQVEYPTVKDEVMVFKPRVEEAQRHARNE 450
Query: 368 IKDSGNKRRRKGG 380
+K+ R +KG
Sbjct: 451 MKNLHEDRGKKGA 463
>sp|Q5B5E7|RRP3_EMENI ATP-dependent rRNA helicase rrp3 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=rrp3 PE=3 SV=1
Length = 465
Score = 454 bits (1168), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/387 (56%), Positives = 290/387 (74%), Gaps = 14/387 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IGLA+TGSGKT AFALP+LQAL+E + F VL+PTRELA QIS+ FE
Sbjct: 83 GRDVIGLAETGSGKTAAFALPMLQALMEAPQT------LFGLVLAPTRELAYQISQAFET 136
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I +RCAV+VGG+DM+ Q++ALGK+PHI+VATPGRL+DHL NTKGFSL LKYL +D
Sbjct: 137 LGSTIGVRCAVIVGGMDMVAQSIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLAID 196
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +SLD+I+ ++PR R TYLFSATM+ KV+ LQRA L NPV++ +SKY T
Sbjct: 197 EADRLLDMDFGESLDKIIRILPRTRHTYLFSATMSTKVESLQRASLSNPVRVSVSSKYQT 256
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL+ Y +P K+K+ YLVY+L E + S ++FT T T+ +A MLR LG AIP+
Sbjct: 257 VSTLQSSYICIPHKHKNLYLVYLLNEFAGQSAIIFTTTVHETQRVAFMLRALGFGAIPLH 316
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS RLGAL KF++ +IL+ TDVA+RGLDIPSVD+V N+D+P +SK YIHRVGRT
Sbjct: 317 GQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVFNFDLPMDSKTYIHRVGRT 376
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG++GVAIS V QY++E +L+IE + KKLPE+ E++EV+++ ERV EA R + + +
Sbjct: 377 ARAGKSGVAISFVTQYDVEVWLRIEHALSKKLPEYQVEKDEVMVMSERVAEASRQATIEM 436
Query: 369 KDSGNKRRRKGGDEDDDIGRQFGINKK 395
K K+ + G++FG K+
Sbjct: 437 KSFDEKKGAR--------GKKFGKGKR 455
>sp|Q9P6N8|RRP3_SCHPO ATP-dependent rRNA helicase rrp3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rrp3 PE=3 SV=1
Length = 465
Score = 453 bits (1165), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/370 (59%), Positives = 285/370 (77%), Gaps = 6/370 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IGLAQTGSGKT AFALP++Q L FFA VL+PTRELA QISEQFEA+
Sbjct: 84 RDVIGLAQTGSGKTAAFALPVIQELWN------NPSPFFAVVLAPTRELAYQISEQFEAI 137
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
G I +R V+VGG+DM+ Q +AL K+PH++V TPGRLMDHL NTKGFSL LKYL++DE
Sbjct: 138 GGSIGVRSVVIVGGMDMVTQAVALSKKPHVLVCTPGRLMDHLENTKGFSLKNLKYLIMDE 197
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYSTV 189
ADRLL+ DF +D+IL +IP R+T LFSATMT KV+KLQRA L PV++ +SK+STV
Sbjct: 198 ADRLLDMDFGPIIDKILKIIPHERRTLLFSATMTSKVEKLQRASLHQPVRVAVSSKFSTV 257
Query: 190 DTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPISG 249
DTL Q+Y F P K+KD YLVY++ E++ +S ++F RT + T+ LA++LR LG AIP+ G
Sbjct: 258 DTLIQRYLFFPFKHKDTYLVYLVNELAGNSIIIFARTVNDTQRLAILLRTLGFSAIPLHG 317
Query: 250 HMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRTA 309
+SQS RLGALNKFK+G + L+ TDVA+RGLDIP VD+VINYDIPT+SK YIHRVGRTA
Sbjct: 318 QLSQSNRLGALNKFKSGARSTLVATDVAARGLDIPLVDVVINYDIPTDSKAYIHRVGRTA 377
Query: 310 RAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTIK 369
RAGR G +I+LV QY+LE +L+IE IGKK+ E+ ++E V LL ERV EA+R + + +K
Sbjct: 378 RAGRAGKSIALVTQYDLEPFLRIEATIGKKMQEYEIDKEGVFLLSERVGEAQREAIIQMK 437
Query: 370 DSGNKRRRKG 379
+ ++R+ KG
Sbjct: 438 EIHDRRKSKG 447
>sp|Q1E1N5|RRP3_COCIM ATP-dependent rRNA helicase RRP3 OS=Coccidioides immitis (strain
RS) GN=RRP3 PE=3 SV=1
Length = 474
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/373 (59%), Positives = 290/373 (77%), Gaps = 7/373 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQAL++ + + F VL+PTRELA QIS+QFEA
Sbjct: 85 GRDLIGLAETGSGKTAAFALPILQALMDKPQ------SMFGLVLAPTRELAYQISQQFEA 138
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS IS+RCAV+VGG+DM+ Q +ALGK+PHI+VATPGRL+DHL NTKGFSL +LKYLV+D
Sbjct: 139 LGSLISVRCAVIVGGMDMVSQAIALGKKPHIIVATPGRLLDHLENTKGFSLRSLKYLVMD 198
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF LD+IL V+P+ R+TYLFSATM+ KV+ LQRA L NP+++ +S KY
Sbjct: 199 EADRLLDLDFGPILDKILKVLPKERRTYLFSATMSSKVESLQRASLSNPLRVSVSSNKYQ 258
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q +P K+KD YL+Y+L E S ++FTRT + T+ LA++LR LG AIP+
Sbjct: 259 TVSTLLQNCLIIPHKHKDIYLIYLLNEFPGQSVIIFTRTVNETQRLAILLRALGFGAIPL 318
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL KF++ NIL+ TDVA+RGLDIPSVD+V+NYD+P++SK YIHRVGR
Sbjct: 319 HGQLSQSARLGALGKFRSRSRNILVATDVAARGLDIPSVDLVLNYDLPSDSKTYIHRVGR 378
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G A SLV QY++E + +IE +GK+L E+ E+EEV++L +RV EA+R +
Sbjct: 379 TARAGKSGRAFSLVTQYDVEIWQRIEAALGKELDEYKVEKEEVMVLSDRVGEAQRHAITE 438
Query: 368 IKDSGNKRRRKGG 380
+K+ R +KG
Sbjct: 439 MKELHENRGKKGA 451
>sp|A2RB17|RRP3_ASPNC ATP-dependent rRNA helicase rrp3 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=rrp3 PE=3 SV=1
Length = 467
Score = 449 bits (1154), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/372 (58%), Positives = 288/372 (77%), Gaps = 7/372 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQAL+E + FF VL+PTRELA QIS+ FE+
Sbjct: 85 GRDLIGLAETGSGKTAAFALPILQALMEKPQ------PFFGLVLAPTRELAYQISKSFES 138
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ + +R V+VGG+DM+ Q+++LGK+PHI+VATPGRL+DHL NTKGFSL LKYLV+D
Sbjct: 139 LGASMGVRSCVIVGGMDMVSQSISLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMD 198
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAA-SKYS 187
EADRLL+ DF LD+IL V+PR R+T+LFSATM+ KV+ LQRA L NP+++ + SKY
Sbjct: 199 EADRLLDMDFGPLLDKILKVLPRERRTFLFSATMSSKVESLQRASLSNPLRVSVSTSKYQ 258
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P K+KD YLVY+L E + ST++FTRT + T+ LA +LR LG AIP+
Sbjct: 259 TVSTLLQSYLFIPQKHKDLYLVYLLNEFAGQSTIIFTRTVNETQRLAFLLRALGFGAIPL 318
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGAL KF+A NIL+ TDVA+RGLDIPSVD+V+N+D+P +S Y+HRVGR
Sbjct: 319 HGQLSQSARLGALGKFRARSRNILVATDVAARGLDIPSVDVVLNFDLPGDSPSYVHRVGR 378
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G+AIS V QY++E +L+IE +GKKL E+ ++EV++L E V EA+R + M
Sbjct: 379 TARAGKSGLAISFVAQYDVEVWLRIEGALGKKLKEYDCPKDEVMVLGENVAEAQRQAIMD 438
Query: 368 IKDSGNKRRRKG 379
+KD K+ +G
Sbjct: 439 MKDYNEKKGSRG 450
>sp|Q2H1Q8|RRP3_CHAGB ATP-dependent rRNA helicase RRP3 OS=Chaetomium globosum (strain
ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL
1970) GN=RRP3 PE=3 SV=1
Length = 493
Score = 447 bits (1151), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/383 (57%), Positives = 293/383 (76%), Gaps = 7/383 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IGLA+TGSGKTGAFALPILQALL+ + FA VL+PTRELA QI++ FEAL
Sbjct: 103 RDIIGLAETGSGKTGAFALPILQALLDKPQ------PLFALVLAPTRELAAQIAQSFEAL 156
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GS ISLRCA+++GG+DM+QQ +ALGK+PH+VVATPGRL+DHL TKGFSL L+YLV+DE
Sbjct: 157 GSLISLRCALILGGLDMVQQAIALGKKPHVVVATPGRLLDHLEKTKGFSLRNLRYLVMDE 216
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYST 188
ADRLL+ DF LD+IL +PR R+T+LFSATM+ KV+ LQRACL++P+K+ ++SKY T
Sbjct: 217 ADRLLDMDFGPILDKILKFLPRERRTFLFSATMSSKVESLQRACLRDPLKVSISSSKYQT 276
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y F+P +KD YL+Y+ E + + ++FTRT T+ +A++LR LG AIP+
Sbjct: 277 VSTLVQNYVFIPHTHKDTYLIYLCNEFAGQTIIIFTRTVIETQRIAILLRTLGMGAIPLH 336
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS RLGALNKF+AG +IL+ TDVA+RGLDIP+VD V+N D+P +SK Y+HRVGRT
Sbjct: 337 GGLSQSARLGALNKFRAGSRDILVATDVAARGLDIPNVDCVLNLDLPGDSKTYVHRVGRT 396
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G AIS V QY+LE +L+IE +G KL E+ E+++V++ RV EA+RI++ I
Sbjct: 397 ARAGRSGHAISFVTQYDLELWLRIEAALGTKLTEYSLEKDDVMVFRPRVEEAQRIAKTEI 456
Query: 369 KDSGNKRRRKGGDEDDDIGRQFG 391
K + R +KG GR+ G
Sbjct: 457 KALMDDRGKKGSVLKGGKGRKRG 479
>sp|A7EML8|RRP3_SCLS1 ATP-dependent rRNA helicase rrp3 OS=Sclerotinia sclerotiorum
(strain ATCC 18683 / 1980 / Ss-1) GN=rrp3 PE=3 SV=1
Length = 482
Score = 446 bits (1147), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/373 (58%), Positives = 288/373 (77%), Gaps = 7/373 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AFALPILQ+LL+ + F VL+PTRELA QIS+ FEA
Sbjct: 93 GRDLIGLAETGSGKTAAFALPILQSLLDKPQ------PLFGLVLAPTRELAYQISQSFEA 146
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS I ++CAV+VGG+DM+ Q +ALGK+PHI+VATPGRL+DHL NTKGFSL +LKYLV+D
Sbjct: 147 LGSIIRVKCAVIVGGMDMVPQAIALGKKPHIIVATPGRLLDHLENTKGFSLRSLKYLVMD 206
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYS 187
EADRLL+ DF LD+IL V+PR R+TYLFSAT++ KV+ LQRA LK+P+++ +S KY
Sbjct: 207 EADRLLDLDFGPILDKILKVLPRERRTYLFSATISSKVESLQRASLKDPLRVSISSNKYQ 266
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q Y F+P +KD YL+Y+L E + S ++FTRT + T+ +A++LR LG AIP+
Sbjct: 267 TVSTLIQNYIFIPLVHKDTYLIYLLNEFAGQSAIIFTRTVNETQRIAILLRTLGFGAIPL 326
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGALNKF+AG IL+ TDVA+RGLDIPSVD+V+NYD+P +SK YIHRVGR
Sbjct: 327 HGQLSQSSRLGALNKFRAGSREILVATDVAARGLDIPSVDVVLNYDMPQDSKTYIHRVGR 386
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAG++G AIS V QY++E +++IE +GKK E+ ++EV++ RV EA+R ++
Sbjct: 387 TARAGKSGHAISFVTQYDVEIWMRIEAALGKKQEEYQTVKDEVMVFKPRVEEAQRHARNE 446
Query: 368 IKDSGNKRRRKGG 380
+K+ R +KG
Sbjct: 447 MKNLHEDRGKKGA 459
>sp|P0CR00|RRP3_CRYNJ ATP-dependent rRNA helicase RRP3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=RRP3 PE=3 SV=1
Length = 484
Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/363 (62%), Positives = 282/363 (77%), Gaps = 6/363 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKT AF+LPILQ L E + FFA VL+PTRELA QIS+Q +
Sbjct: 75 GKDIIGLAQTGSGKTAAFSLPILQTLWENPQ------PFFALVLAPTRELAYQISQQVTS 128
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI +R AVLVGG+DMM Q++AL KRPHI+VATPGRLMDHL NTKGFSL +LKYLV+D
Sbjct: 129 LGSGIGVRTAVLVGGMDMMSQSIALSKRPHIIVATPGRLMDHLENTKGFSLKSLKYLVMD 188
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +D+IL VIP+ R TYLFSATMT KV KLQRA L PV++E +SKYST
Sbjct: 189 EADRLLDLDFGPIIDKILKVIPKERNTYLFSATMTTKVAKLQRASLNKPVRVEVSSKYST 248
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y +P K KD YL+Y+ E+S+SS M+FTRT ++ L+++LR LG AIP+
Sbjct: 249 VSTLLQHYLLLPLKNKDAYLLYLANELSSSSMMIFTRTVADSQRLSIILRRLGFPAIPLH 308
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M+QS RL +LNKFK+G +IL+ TDVASRGLDIP VD+VINYD+PTNSKDY+HRVGRT
Sbjct: 309 GQMTQSLRLASLNKFKSGGRSILVATDVASRGLDIPLVDLVINYDMPTNSKDYVHRVGRT 368
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+LV QY++E +IE IGKK+ F ++E V LL + V +A R + + +
Sbjct: 369 ARAGRSGKSITLVTQYDVEILQRIESHIGKKMTSFDVDKEAVALLTDTVAKANREAALEM 428
Query: 369 KDS 371
++S
Sbjct: 429 RES 431
>sp|P0CR01|RRP3_CRYNB ATP-dependent rRNA helicase RRP3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=RRP3 PE=3 SV=1
Length = 484
Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/363 (62%), Positives = 282/363 (77%), Gaps = 6/363 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKT AF+LPILQ L E + FFA VL+PTRELA QIS+Q +
Sbjct: 75 GKDIIGLAQTGSGKTAAFSLPILQTLWENPQ------PFFALVLAPTRELAYQISQQVTS 128
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSGI +R AVLVGG+DMM Q++AL KRPHI+VATPGRLMDHL NTKGFSL +LKYLV+D
Sbjct: 129 LGSGIGVRTAVLVGGMDMMSQSIALSKRPHIIVATPGRLMDHLENTKGFSLKSLKYLVMD 188
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +D+IL VIP+ R TYLFSATMT KV KLQRA L PV++E +SKYST
Sbjct: 189 EADRLLDLDFGPIIDKILKVIPKERNTYLFSATMTTKVAKLQRASLNKPVRVEVSSKYST 248
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TL Q Y +P K KD YL+Y+ E+S+SS M+FTRT ++ L+++LR LG AIP+
Sbjct: 249 VSTLLQHYLLLPLKNKDAYLLYLANELSSSSMMIFTRTVADSQRLSIILRRLGFPAIPLH 308
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G M+QS RL +LNKFK+G +IL+ TDVASRGLDIP VD+VINYD+PTNSKDY+HRVGRT
Sbjct: 309 GQMTQSLRLASLNKFKSGGRSILVATDVASRGLDIPLVDLVINYDMPTNSKDYVHRVGRT 368
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAGR+G +I+LV QY++E +IE IGKK+ F ++E V LL + V +A R + + +
Sbjct: 369 ARAGRSGKSITLVTQYDVEILQRIESHIGKKMTSFDVDKEAVALLTDTVAKANREAALEM 428
Query: 369 KDS 371
++S
Sbjct: 429 RES 431
>sp|Q0UK12|RRP3_PHANO ATP-dependent rRNA helicase RRP3 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=RRP3 PE=3 SV=2
Length = 546
Score = 441 bits (1135), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/371 (57%), Positives = 287/371 (77%), Gaps = 8/371 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AGKD+IGLA+TGSGKT AF LPILQALL+ + A+F +++PTRELA QIS+Q +
Sbjct: 151 AGKDIIGLAETGSGKTAAFVLPILQALLDKPQ------AYFGLIMAPTRELAYQISQQVD 204
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
ALGS I+++CA LVGG+DM+ Q +AL KRPHI+VA+PGRL+DHL NTKGFSL LKYLVL
Sbjct: 205 ALGSIINVKCATLVGGMDMVPQAIALSKRPHIIVASPGRLLDHLENTKGFSLKHLKYLVL 264
Query: 128 DEADRLLNDDFEKSLDEILNVIPRM-RQTYLFSATMTKKVKKLQRACLKNPVKIE-AASK 185
DEADRLL+ DF SLD+I V+PR R TYLFSATM+ KV+ LQRA LKNPV++ ++S
Sbjct: 265 DEADRLLDLDFGDSLDKIFKVLPRDDRHTYLFSATMSSKVESLQRAALKNPVRVSISSSS 324
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAI 245
+ V TL Q Y +P KYKD YL+++L + +T++FTRT + T+ LA++LR LG +A+
Sbjct: 325 HQVVSTLLQSYMLIPHKYKDLYLIHLLNDNIGHATILFTRTVNETQRLAVLLRTLGFQAL 384
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
P+ G +SQS RLGALNKFKA +IL+ TDVA+RGLDIPSVD+V+N+D+P +S+ Y+HRV
Sbjct: 385 PLHGQLSQSNRLGALNKFKAKARDILVATDVAARGLDIPSVDLVVNFDLPHDSETYVHRV 444
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
GRTARAG++G A+S V QY+LE + +IE +GK++PE +EV++ ERV EA+R++
Sbjct: 445 GRTARAGKSGKAVSFVTQYDLEIFQRIEHALGKQVPEEKVSRDEVMVYAERVGEAQRVAV 504
Query: 366 MTIKDSGNKRR 376
+KD ++R+
Sbjct: 505 REMKDLHDQRK 515
>sp|Q0CIQ3|RRP3_ASPTN ATP-dependent rRNA helicase rrp3 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=rrp3 PE=3 SV=2
Length = 445
Score = 441 bits (1133), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/388 (55%), Positives = 290/388 (74%), Gaps = 16/388 (4%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+DLIGLA+TGSGKT AF LP+LQAL++ + F + +L+PTRELA QI+ EA
Sbjct: 65 GRDLIGLAETGSGKTAAFVLPMLQALMDKPQQ------FHSLILAPTRELAQQIAHTVEA 118
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ IS+RC +L+GG+DM+ Q +ALGK+PH++VATPGRL+DHL NTKGFSL TLKYLVLD
Sbjct: 119 LGARISVRCTLLIGGMDMISQAIALGKKPHVIVATPGRLLDHLENTKGFSLRTLKYLVLD 178
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF LD++L ++P+ R+TYLFSATM+ KV+ LQRA L +PV++ ++K T
Sbjct: 179 EADRLLDLDFGPILDKLLRLLPK-RKTYLFSATMSSKVESLQRASLSDPVRVSVSTKNQT 237
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
L Q Y F+P K+KD YLVY+L E + ++FTRT T+ L++MLRNLG AIPI
Sbjct: 238 ASKLLQSYLFIPHKFKDFYLVYLLNERAGQMGIIFTRTVHETQRLSIMLRNLGFPAIPIH 297
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS RL +LNKF+A N+LI TDVA+RGLDIP+VD V+NYD+P +SK YIHRVGRT
Sbjct: 298 GQLSQSARLASLNKFRARSRNLLIATDVAARGLDIPAVDYVLNYDLPQDSKTYIHRVGRT 357
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG++G+A S V QYE+E +L+IE +GKK+ E+ E++EV++ ERV +A+R++ +T+
Sbjct: 358 ARAGKSGIAFSFVTQYEVELWLRIEDALGKKVEEYKPEKDEVMIFAERVNDAQRVAALTM 417
Query: 369 KDSGNK---------RRRKGGDEDDDIG 387
+D +K R+R D D D G
Sbjct: 418 RDMQDKDNKGRGPRNRKRTRDDLDQDDG 445
>sp|Q7RY59|RRP3_NEUCR ATP-dependent rRNA helicase rrp-3 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rrp-3 PE=3 SV=1
Length = 515
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/372 (56%), Positives = 288/372 (77%), Gaps = 7/372 (1%)
Query: 10 KDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEAL 69
+D+IG+A+TGSGKT AFALPILQALL+ + P FA VL+PTRELA QI++ FEAL
Sbjct: 128 RDIIGIAETGSGKTAAFALPILQALLD-----KPAP-LFALVLAPTRELAAQIAQAFEAL 181
Query: 70 GSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLDE 129
GS ISLRCA+++GG+DM+ Q +ALGK+PH++VATPGRL+DHL TKGFSL +++YLV+DE
Sbjct: 182 GSLISLRCALILGGMDMVTQAIALGKKPHVIVATPGRLLDHLEKTKGFSLRSMQYLVMDE 241
Query: 130 ADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAAS-KYST 188
ADRLL+ DF L++IL +PR R+T+LFSATM+ KV+ LQRA L++P+K+ +S KY+T
Sbjct: 242 ADRLLDMDFGPILEKILKFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSVSSNKYAT 301
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
V TLK Y F+P +KD YLVY+ E + + ++FTRT T+ +A++LR LG AIP+
Sbjct: 302 VSTLKSNYVFIPHMHKDTYLVYLCNEFAGQTIIIFTRTVLETQRIAILLRTLGMGAIPLH 361
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS RLGALNKF+AG IL+ TDVA+RGLDIP+VD VIN+D+P +SK Y+HRVGRT
Sbjct: 362 GGLSQSARLGALNKFRAGSREILVATDVAARGLDIPNVDCVINHDLPQDSKTYVHRVGRT 421
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMTI 368
ARAG++G AIS+V QY+LE +L+IE +G KL E+P E++EV++ RV EA+R ++ +
Sbjct: 422 ARAGKSGHAISIVTQYDLEIWLRIEAALGHKLDEYPLEKDEVMVFKPRVEEAQRHARNEM 481
Query: 369 KDSGNKRRRKGG 380
K + + GG
Sbjct: 482 KSLMENQGKHGG 493
>sp|A4RGD1|RRP3_MAGO7 ATP-dependent rRNA helicase RRP3 OS=Magnaporthe oryzae (strain
70-15 / ATCC MYA-4617 / FGSC 8958) GN=RRP3 PE=3 SV=1
Length = 538
Score = 435 bits (1119), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/375 (57%), Positives = 286/375 (76%), Gaps = 9/375 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+IG+A+TGSGKT AFALPILQ+LLE + F VL+PTRELA QI + FEA
Sbjct: 147 GRDVIGIAETGSGKTAAFALPILQSLLEKPQ------PLFGLVLAPTRELAAQIGQTFEA 200
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG+ ISLRCAV+VGG+DM+ Q+ ALGK+PHIVVATPGRL+DHL TKGFSL +LK+LV+D
Sbjct: 201 LGASISLRCAVVVGGLDMVSQSTALGKKPHIVVATPGRLLDHLEKTKGFSLRSLKFLVMD 260
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIE-AASKYS 187
EADRLL+ DF LD+IL +PR R+T+LFSATM+ KV+ LQRA L++P+K+ ++S+
Sbjct: 261 EADRLLDLDFGPILDKILKFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSVSSSQEK 320
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV TL Q F+P K+KD YL+Y+ E + +T+VFTRT + + ++++LR L AIP+
Sbjct: 321 TVSTLIQNPLFIPHKHKDVYLIYLANEFAGKTTIVFTRTVNEAQRVSILLRTLSFGAIPL 380
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQS RLGALNKFKA +IL+ TDVA+RGLDIP VD+VIN+D+P +S YIHRVGR
Sbjct: 381 HGQLSQSMRLGALNKFKARSRDILVATDVAARGLDIPEVDLVINFDMPQDSMTYIHRVGR 440
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEK--LIGKKLPEFPAEEEEVLLLLERVTEAKRISQ 365
TARAGR+G AIS++ QY+LE +L+IEK L G+KLP F ++EEV++ ERV EA+R ++
Sbjct: 441 TARAGRSGRAISIITQYDLELWLRIEKAALNGRKLPLFQPDKEEVMVFKERVEEAQRHAR 500
Query: 366 MTIKDSGNKRRRKGG 380
+K R +KG
Sbjct: 501 EEMKALHEDRGKKGA 515
>sp|Q6BQ61|RRP3_DEBHA ATP-dependent rRNA helicase RRP3 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=RRP3 PE=3 SV=2
Length = 477
Score = 434 bits (1117), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/378 (57%), Positives = 274/378 (72%), Gaps = 7/378 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKT AFA+PILQAL E A++ VL+PTRELA QI E F+A
Sbjct: 102 GKDIIGLAQTGSGKTAAFAIPILQALWEAQA------AYYGLVLAPTRELAYQIKETFDA 155
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + LR +VGG+DMM Q L ++PHI+VATPGR+MDHL +TKGFSL LKYLV+D
Sbjct: 156 LGSSMGLRSVCIVGGMDMMDQARDLMRKPHILVATPGRIMDHLEHTKGFSLKNLKYLVMD 215
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +LD+IL +IP R TYLFSATMT K+ KLQRA L NPV++ ++KY T
Sbjct: 216 EADRLLDMDFGPALDKILKIIPTQRTTYLFSATMTNKIAKLQRASLHNPVRVAVSNKYQT 275
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
D L Q V YK+ YL+++L E S ++FTRTC ++ AL+ R LG A+P+
Sbjct: 276 ADNLVQSMMLVSDGYKNTYLIHLLNEFLGKSIIIFTRTCAHSQRTALLARILGFSAVPLH 335
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G ++Q++RLG+LNKFKAG+ NILI TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRT
Sbjct: 336 GQLTQAQRLGSLNKFKAGKANILIATDVAARGLDIPSVDIVINYDIPTDSKAYIHRVGRT 395
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLE-RVTEAKRISQMT 367
ARAG++G +ISL+ QY+LE YL+IE ++GKKLP+ P+ + VL L V A +
Sbjct: 396 ARAGKSGKSISLITQYDLEMYLRIESVLGKKLPKDPSPSKAVLDTLHVHVDRASAEAIRQ 455
Query: 368 IKDSGNKRRRKGGDEDDD 385
KD KR K +D D
Sbjct: 456 TKDFHEKRNPKKNRDDRD 473
>sp|A5DQF1|RRP3_PICGU ATP-dependent rRNA helicase RRP3 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=RRP3 PE=3 SV=2
Length = 475
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/377 (58%), Positives = 276/377 (73%), Gaps = 7/377 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKT AFA+PILQ+L E QR ++A VL+PTRELA QI E F+A
Sbjct: 101 GKDIIGLAQTGSGKTAAFAIPILQSLWEA---QR---PYYALVLAPTRELAYQIKETFDA 154
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGSG+ +R +VGG+DMM Q L ++PHI+VATPGR+MDHL NTKGFSL +L+YLV+D
Sbjct: 155 LGSGMGVRSVCIVGGMDMMDQARDLMRKPHILVATPGRIMDHLENTKGFSLKSLQYLVMD 214
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +LD+IL VIP R TYLFSATMT K+ KLQRA L PVK+ ++KY T
Sbjct: 215 EADRLLDMDFGPALDKILKVIPTKRTTYLFSATMTNKIAKLQRASLHEPVKVAVSNKYQT 274
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
D L Q V YK+ +L+++L E S +VFTRTC T+ L+ R LG A+P+
Sbjct: 275 ADNLVQSMMLVSDGYKNTFLIHLLNEFMGKSIIVFTRTCAHTQRSTLLARILGFSAVPLH 334
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G ++QS+RLG+LNKFK+G+ NILI TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRT
Sbjct: 335 GQLTQSQRLGSLNKFKSGKANILIATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRT 394
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLE-RVTEAKRISQMT 367
ARAG++G +ISLV QY+LE YL+IE ++G KLP+ P+ +VL L V A +
Sbjct: 395 ARAGKSGKSISLVTQYDLEMYLRIESVLGFKLPKDPSPPRDVLNALHVHVDRASAEAIKQ 454
Query: 368 IKDSGNKRRRKGGDEDD 384
KD KR +K D+ D
Sbjct: 455 TKDFHEKRTKKKRDDRD 471
>sp|Q5ACU6|RRP3_CANAL ATP-dependent rRNA helicase RRP3 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=RRP3 PE=3 SV=2
Length = 539
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/343 (59%), Positives = 258/343 (75%), Gaps = 6/343 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKT AFA+PILQ+L + +FA VL+PTREL QI + F+A
Sbjct: 160 GKDIIGLAQTGSGKTAAFAIPILQSLWHAQQ------PYFALVLAPTRELTFQIKDTFDA 213
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + LR + +VGG+DMM Q L ++PH++VATPGR+MDHL +TKGFSL LKYLV+D
Sbjct: 214 LGSSMGLRSSCIVGGMDMMDQARDLMRKPHVIVATPGRIMDHLEHTKGFSLKNLKYLVMD 273
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EADRLL+ DF +LD+IL VIP R TYLFSATMT K++KLQRA L NPV++ +SKY T
Sbjct: 274 EADRLLDMDFGPALDKILKVIPIKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSSKYQT 333
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
D L Q V YK+ L+++L E S +VFTRT + AL+ R LG A+P+
Sbjct: 334 ADNLVQSMMLVNDGYKNTILIHLLNEFMGKSIIVFTRTVAHAQRTALLARILGFNAVPLH 393
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G +SQS+RLG+LNKFK+ + NIL+ TDVA+RGLDIPSVD+VINYDIPT+SK YIHRVGRT
Sbjct: 394 GQLSQSQRLGSLNKFKSNQANILVATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRT 453
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVL 351
ARAGR+G +ISL+ QY+LE YL+IE ++GKKLP+ +EVL
Sbjct: 454 ARAGRSGKSISLITQYDLEMYLRIESVLGKKLPKEDKPPKEVL 496
>sp|A3LS22|RRP3_PICST ATP-dependent rRNA helicase RRP3 OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=RRP3 PE=3 SV=3
Length = 484
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/379 (54%), Positives = 268/379 (70%), Gaps = 9/379 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKT AFA+PILQ+L E +F VL+P RELA QI E F+A
Sbjct: 108 GKDIIGLAQTGSGKTAAFAIPILQSLWEAQT------PYFGLVLAPARELAYQIKETFDA 161
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R LVGG+DMM Q L ++PHI++ATPGR+MDHL +TKGFSL LKY V+D
Sbjct: 162 LGSTMGVRTVCLVGGMDMMDQARDLMRKPHIIIATPGRIMDHLEHTKGFSLKMLKYFVMD 221
Query: 129 EADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYST 188
EAD+LL+ +F LD+IL IP R TYLFSATMT K++KLQRA L NPV++ +SKY T
Sbjct: 222 EADKLLDLEFGPVLDKILKQIPSKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSSKYQT 281
Query: 189 VDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPIS 248
D L Q V YK+ YL+++L E S ++F RT T+ +++ R LG A+P+
Sbjct: 282 ADNLIQSMMLVSDGYKNTYLIHLLNEFVGKSIIIFARTRAHTQRTSILCRILGFSAVPLH 341
Query: 249 GHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGRT 308
G ++Q++RLG+LNKFK+G NILI TDVA+RGLDIPSVD+VINYDIPT+SK Y+HRVGRT
Sbjct: 342 GDLTQAQRLGSLNKFKSGTANILIATDVAARGLDIPSVDVVINYDIPTDSKAYVHRVGRT 401
Query: 309 ARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTE---AKRISQ 365
ARAGR+G +ISLV QY+LE YL+IE+ I KKLP+ P+ + +L L + A+ I Q
Sbjct: 402 ARAGRSGKSISLVTQYDLEMYLRIEQSIQKKLPKDPSPPKAMLDALHVHVDRAYAEAIRQ 461
Query: 366 MTIKDSGNKRRRKGGDEDD 384
+R R+G D+ D
Sbjct: 462 TKEFHEKTRRGRRGKDDKD 480
>sp|Q6FNK8|RRP3_CANGA ATP-dependent rRNA helicase RRP3 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=RRP3 PE=3 SV=1
Length = 493
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/375 (53%), Positives = 267/375 (71%), Gaps = 9/375 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG D+IGLAQTGSGKT AFA+PIL L E + ++ACVL+PTRELA QI E F+
Sbjct: 109 AGSDVIGLAQTGSGKTAAFAIPILNKLWEDQQ------PYYACVLAPTRELAQQIKETFD 162
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
+LGS + +R +VGG++MM Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+
Sbjct: 163 SLGSLMGVRTTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLKNLKFLVM 222
Query: 128 DEADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
DEADRLL+ +F LD IL +IP + R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 223 DEADRLLDMEFGPVLDRILKIIPTKGRTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKY 282
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
TVDTL Q VP K+ +L+Y+L E + ++FTRT L+ + L A
Sbjct: 283 QTVDTLVQTLMVVPGGLKNTFLIYLLNEFIGKTVIIFTRTKANAERLSGLCNLLEFSATA 342
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
+ G ++Q++R GAL+ FKAG+ +IL+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRVG
Sbjct: 343 LHGDLNQNQRTGALDLFKAGKRSILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVG 402
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA--KRIS 364
RTARAGR+G +ISLV+QY+LE L+IE+++GKKLP+ ++ +L L + V +A + +
Sbjct: 403 RTARAGRSGKSISLVSQYDLELILRIEEVLGKKLPKESVDKNIILTLRDSVDKANGEVVM 462
Query: 365 QMTIKDSGNKRRRKG 379
+M ++ + R KG
Sbjct: 463 EMNRRNKEKQARGKG 477
>sp|Q6CT85|RRP3_KLULA ATP-dependent rRNA helicase RRP3 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=RRP3 PE=3 SV=1
Length = 487
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/353 (55%), Positives = 255/353 (72%), Gaps = 7/353 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLAQTGSGKT AFA+PIL L + ++AC+L+PTRELA QI E F++
Sbjct: 104 GSDIIGLAQTGSGKTAAFAIPILNQLWHDQQ------PYYACILAPTRELAQQIKETFDS 157
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R +VGG+ MM Q L ++PHI++ATPGRLMDHL NTKGF+L LKYLV+D
Sbjct: 158 LGSLMGVRSTCIVGGMSMMDQARDLMRKPHIIIATPGRLMDHLENTKGFNLRKLKYLVMD 217
Query: 129 EADRLLNDDFEKSLDEILNVIPRM-RQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD ILN+IP R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 218 EADRLLDMEFGPVLDRILNIIPTQGRTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQ 277
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL Q VP K+ +L+Y+L E ST+VFTRT ++ + L A +
Sbjct: 278 TVDTLVQTLMVVPGGLKNTFLIYLLNEFIGKSTIVFTRTKANAERISNLCNLLEFSATAL 337
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++Q++R GAL+ FKAG+ +IL+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRVGR
Sbjct: 338 HGDLNQNQRTGALDLFKAGKRSILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGR 397
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
TARAGR+G +ISLV+QY+LE L+IE ++GKKLP+ +++ +L L + V +A
Sbjct: 398 TARAGRSGKSISLVSQYDLELILRIEDVLGKKLPKENVDKDAILALRDSVDKA 450
>sp|A6ZSX1|RRP3_YEAS7 ATP-dependent rRNA helicase RRP3 OS=Saccharomyces cerevisiae
(strain YJM789) GN=RRP3 PE=3 SV=1
Length = 501
Score = 384 bits (987), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/353 (54%), Positives = 256/353 (72%), Gaps = 7/353 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLAQTGSGKT AFA+PIL L E ++AC+L+PTRELA QI E F++
Sbjct: 118 GHDIIGLAQTGSGKTAAFAIPILNRLWHDQE------PYYACILAPTRELAQQIKETFDS 171
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R +VGG++MM Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+D
Sbjct: 172 LGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMD 231
Query: 129 EADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL +IP + R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 232 EADRLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQ 291
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL Q VP K+ YL+Y+L E + ++FTRT L+ + L A +
Sbjct: 292 TVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATAL 351
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++Q++R+GAL+ FKAG+ +IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGR
Sbjct: 352 HGDLNQNQRMGALDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGR 411
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
TARAGR+G +ISLV+QY+LE L+IE+++GKKLP+ ++ +L L + V +A
Sbjct: 412 TARAGRSGKSISLVSQYDLELILRIEEVLGKKLPKESVDKNIILTLRDSVDKA 464
>sp|P38712|RRP3_YEAST ATP-dependent rRNA helicase RRP3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RRP3 PE=1 SV=2
Length = 501
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/353 (54%), Positives = 256/353 (72%), Gaps = 7/353 (1%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLAQTGSGKT AFA+PIL L E ++AC+L+PTRELA QI E F++
Sbjct: 118 GHDIIGLAQTGSGKTAAFAIPILNRLWHDQE------PYYACILAPTRELAQQIKETFDS 171
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R +VGG++MM Q L ++PHI++ATPGRLMDHL NTKGFSL LK+LV+D
Sbjct: 172 LGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMD 231
Query: 129 EADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL +IP + R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 232 EADRLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQ 291
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL Q VP K+ YL+Y+L E + ++FTRT L+ + L A +
Sbjct: 292 TVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATAL 351
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++Q++R+G+L+ FKAG+ +IL+ TDVA+RGLDIPSVD+V+NYDIP +SK YIHRVGR
Sbjct: 352 HGDLNQNQRMGSLDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGR 411
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
TARAGR+G +ISLV+QY+LE L+IE+++GKKLP+ ++ +L L + V +A
Sbjct: 412 TARAGRSGKSISLVSQYDLELILRIEEVLGKKLPKESVDKNIILTLRDSVDKA 464
>sp|A7TS37|RRP3_VANPO ATP-dependent rRNA helicase RRP3 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=RRP3 PE=3 SV=1
Length = 506
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/355 (55%), Positives = 258/355 (72%), Gaps = 11/355 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D+IGLAQTGSGKT AFA+PIL L + ++AC+L+PTRELA QI E F++
Sbjct: 123 GHDIIGLAQTGSGKTAAFAIPILNRLWHDQQ------PYYACILAPTRELAQQIKETFDS 176
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R A +VGG++MM Q L ++PHI++ATPGRLMDHL NT+GFSL LK+LV+D
Sbjct: 177 LGSLMGVRSACIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTRGFSLRKLKFLVMD 236
Query: 129 EADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL +IP + R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 237 EADRLLDMEFGPVLDRILKIIPTQGRTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQ 296
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRT-CDATRLLALMLRNLGQ-RAI 245
TVDTL Q VP K+ YL+Y++ E + +VFTRT +A R+ L NL + A
Sbjct: 297 TVDTLVQTLIVVPGGLKNTYLIYLMNEFIGKTIIVFTRTKANAERITTLA--NLLEFSAT 354
Query: 246 PISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRV 305
+ G ++Q++R G+L+ FKAG +IL+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRV
Sbjct: 355 ALHGDLNQNQRTGSLDLFKAGRRSILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRV 414
Query: 306 GRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA 360
GRTARAGR+G +ISLV+QY+LE L+IE ++GKKLP+ ++ +L L + V +A
Sbjct: 415 GRTARAGRSGKSISLVSQYDLELILRIEDVLGKKLPKENVNKDAILTLRDSVDKA 469
>sp|Q75EW9|RRP3_ASHGO ATP-dependent rRNA helicase RRP3 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RRP3
PE=3 SV=2
Length = 486
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/374 (52%), Positives = 266/374 (71%), Gaps = 9/374 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD+IGLAQTGSGKT AFA+PIL L + ++AC+L+PTRELA QI E F++
Sbjct: 103 GKDIIGLAQTGSGKTAAFAIPILNRLWHDQQ------PYYACILAPTRELAQQIKETFDS 156
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + +R +VGG++MM Q L ++PHI++ATPGRLMDHL NTKGF+L L++LV+D
Sbjct: 157 LGSLMGVRTTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFALRKLQFLVMD 216
Query: 129 EADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
EADRLL+ +F LD IL IP + R TYLFSATMT K+ KLQRA L NPVK ++KY
Sbjct: 217 EADRLLDMEFGPVLDRILKNIPTKGRTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQ 276
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TVDTL Q VP K+ +L+Y+L E +T+VFTRT ++ + L A +
Sbjct: 277 TVDTLVQTLIVVPGGLKNTFLIYLLNEFIGKTTIVFTRTKANAERISGLCNLLEFSATAL 336
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G ++Q++R GAL+ FKAG+ +IL+ TDVA+RGLDIPSVD+VINYDIP +SK YIHRVGR
Sbjct: 337 HGDLNQNQRTGALDLFKAGKKSILVATDVAARGLDIPSVDLVINYDIPVDSKSYIHRVGR 396
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEA--KRISQ 365
TARAGR+G ++SLV+QY+LE L+IE+++GKKLP+ ++ VL L + V +A + I +
Sbjct: 397 TARAGRSGKSVSLVSQYDLELILRIEEVLGKKLPKENVDKSIVLSLRDSVDKANGEVIME 456
Query: 366 MTIKDSGNKRRRKG 379
+ ++ + R KG
Sbjct: 457 LNRRNKEKQTRGKG 470
>sp|A5E6W6|RRP3_LODEL ATP-dependent rRNA helicase RRP3 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=RRP3 PE=3 SV=1
Length = 504
Score = 354 bits (908), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 185/374 (49%), Positives = 256/374 (68%), Gaps = 12/374 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
GKD++G+A+TGSGKT AFA+PILQ L A+ ++A VL+PTRELA QI E F+A
Sbjct: 135 GKDIVGIAETGSGKTAAFAIPILQTLYTAAQ------PYYALVLAPTRELAFQIKETFDA 188
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LGS + LR ++GG+ MM+Q L ++PH+++ATPGRL+DHL +TKGFSL L+YLV+D
Sbjct: 189 LGSSMGLRSVCIIGGMSMMEQARDLMRKPHVIIATPGRLIDHLEHTKGFSLKKLQYLVMD 248
Query: 129 EADRLLNDDFEKSLDEILNVIP-RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
E DR+++ D+ K++D+IL IP R TYL++ATM+++++K +R+ L +PV++E
Sbjct: 249 EVDRMIDLDYAKAIDQILKQIPSHQRITYLYTATMSREIEKFKRS-LNSPVQVEIVKLEK 307
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
D LKQ KD L+ I+ S ++FTRT TR LML NLG + + +
Sbjct: 308 VPDKLKQTMCLTSPNTKDTRLIQIVNLDSMKRVIIFTRTVVHTRRCCLMLLNLGFKCVEL 367
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G M QS+RLGA+NKFKAG IL+ TDVA+RGLDIP+VD+VINYDIP + YIHRVGR
Sbjct: 368 HGQMPQSRRLGAINKFKAG-TPILVATDVAARGLDIPAVDLVINYDIP-DPTLYIHRVGR 425
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLP--EFPAEEEEVLLLLERVTEAKRISQ 365
TARAG+ G AISLV QY+LE YL+IE +G KLP + P +E + L + +K I
Sbjct: 426 TARAGKAGKAISLVTQYDLESYLRIENTLGTKLPKEDLPLDEMQGLQVSVDRALSKAIQM 485
Query: 366 MTIKDSGNKRRRKG 379
+ +++ NK R +G
Sbjct: 486 LRNEENDNKLRHRG 499
>sp|Q55BR9|DDX49_DICDI Probable ATP-dependent RNA helicase ddx49 OS=Dictyostelium
discoideum GN=ddx49 PE=3 SV=1
Length = 508
Score = 343 bits (880), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 176/364 (48%), Positives = 240/364 (65%), Gaps = 8/364 (2%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D+I A+TGSGKT +FA+PIL L +E+ V FA +L+PTRELA+QI EQF A
Sbjct: 41 GRDIIASAKTGSGKTASFAIPILNQL---SEDPYGV---FAVILTPTRELAVQIGEQFNA 94
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
+G+ +++ C+V++GG+D + Q L L KRPHI+VATPGRL HL N +L K+LVLD
Sbjct: 95 IGAPMNVNCSVVIGGIDNVTQALILDKRPHIIVATPGRLASHLNNGLKIALKFCKFLVLD 154
Query: 129 EADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
EADRLL +DFE + IL +P RQT LFSATMTK + KL L P E SKY
Sbjct: 155 EADRLLGEDFELEIASILEHLPPPEKRQTLLFSATMTKNLTKLDSIALNKPFIFEDNSKY 214
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIP 246
TVDTLKQ+Y ++PA KDCYLVYIL + SS +VF C A + ML L ++
Sbjct: 215 DTVDTLKQEYIYMPAPTKDCYLVYILKKHEGSSAIVFVNNCYAVEAVKGMLNKLDIPSVS 274
Query: 247 ISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVG 306
+ + Q RL AL FK+G+ +L+ TDVASRGLDIP V +VINY + +SKDYIHRVG
Sbjct: 275 LHSFLDQKSRLAALKTFKSGKVKVLVATDVASRGLDIPDVQIVINYKLSNSSKDYIHRVG 334
Query: 307 RTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQM 366
RTAR GR+G AIS + +++ IE++I K+L + +++EV L+ + A++I ++
Sbjct: 335 RTARFGRSGRAISFITPHDVSLIKGIEEIIKKQLELYKTDDDEVFRHLKEASTARKIVEI 394
Query: 367 TIKD 370
+ +
Sbjct: 395 HLDE 398
>sp|Q9Y6V7|DDX49_HUMAN Probable ATP-dependent RNA helicase DDX49 OS=Homo sapiens GN=DDX49
PE=1 SV=1
Length = 483
Score = 330 bits (847), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 186/410 (45%), Positives = 250/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPYG------IFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ FS+ +++LV+D
Sbjct: 93 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +++LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAP 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
STV+ L Q+Y VP K KD YLV+++ E S ++FT TC ++L +MLR
Sbjct: 213 VSTVEQLDQRYLLVPEKVKDAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFS 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I KKL EF EE EVL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVR 392
Query: 362 RISQMTI-------KDSGNKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ + K NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEAAHFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKNRR 442
>sp|Q9SA27|RH36_ARATH DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana
GN=RH36 PE=2 SV=1
Length = 491
Score = 328 bits (840), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 178/370 (48%), Positives = 246/370 (66%), Gaps = 11/370 (2%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D++GLAQTGSGKT AFALPIL L AE+ V FA V++PTRELA Q++EQF+
Sbjct: 94 AGRDVLGLAQTGSGKTAAFALPILHRL---AEDPYGV---FALVVTPTRELAFQLAEQFK 147
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYL 125
ALGS ++LRC+V+VGG+DM+ QT++L RPHIV+ TPGR+ L N K+L
Sbjct: 148 ALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIVITTPGRIKVLLENNPDVPPVFSRTKFL 207
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
VLDEADR+L+ F+ L I +P+ RQT LFSATMT ++ L EA
Sbjct: 208 VLDEADRVLDVGFQDELRTIFQCLPKSRQTLLFSATMTSNLQALLEHSSNKAYFYEAYEG 267
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILTEVSAS---STMVFTRTCDATRLLALMLRNLGQ 242
TVDTL QQ+ F K+ YLV+IL+++ S M+F TC + L+LML L
Sbjct: 268 LKTVDTLTQQFIFEDKDAKELYLVHILSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEV 327
Query: 243 RAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYI 302
I + SQS RL AL+KFK+G+ IL+ TDVASRGLDIP+VD+VINYDIP + +DY+
Sbjct: 328 ENIAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYV 387
Query: 303 HRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
HRVGRTARAGR G+A+S++ + +++ +IE+ +GKK+ + + L + +V++AKR
Sbjct: 388 HRVGRTARAGRGGLAVSIITETDVKLIHKIEEEVGKKMEPYNKKVITDSLEVTKVSKAKR 447
Query: 363 ISQMTIKDSG 372
++ M + D+G
Sbjct: 448 VAMMKMLDNG 457
>sp|Q4FZF3|DDX49_MOUSE Probable ATP-dependent RNA helicase DDX49 OS=Mus musculus GN=Ddx49
PE=2 SV=1
Length = 480
Score = 325 bits (833), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 181/410 (44%), Positives = 250/410 (60%), Gaps = 23/410 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D +G A+TGSGKT AF LPILQ L E F VL+PTRELA QI+EQF
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKLSEDPY------GIFCLVLTPTRELAYQIAEQFRV 92
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVLD 128
LG + L+ ++VGG+DM+ Q L L ++PH+V+ATPGRL DHL ++ F++ +++LV+D
Sbjct: 93 LGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFNMKKIQFLVMD 152
Query: 129 EADRLLND---DFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASK 185
EADRLL DF L+ IL +P RQT LFSAT+T +K+LQ P EA +
Sbjct: 153 EADRLLEQGCTDFTTDLETILAAVPARRQTLLFSATLTDTLKELQGLATNEPFFWEAQAT 212
Query: 186 YSTVDTLKQQYRFVPAKYKDCYLVYILT----EVSASSTMVFTRTCDATRLLALMLRNLG 241
TV+ L Q+Y VP K KD YLV+++ ++ S ++FT TC ++L +MLR
Sbjct: 213 VRTVEQLDQRYLLVPEKVKDAYLVHLVQTFQDQLEDCSIIIFTNTCKTCQILCMMLRKFN 272
Query: 242 QRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDY 301
+ + M Q +R AL KFK+ ILI TDVASRGLDIP+V +VIN++ P K Y
Sbjct: 273 FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIY 332
Query: 302 IHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAK 361
IHRVGRTARAGR G AI+LV QY++ IE+ I ++L E EE EVL +L +V +
Sbjct: 333 IHRVGRTARAGRQGQAITLVTQYDIHLLHAIEEQIKQQLAELVVEEAEVLQILTQVNVVR 392
Query: 362 RISQMTIKDSG-------NKRRR---KGGDEDDDIGRQFGINKKKLSKRK 401
R ++ ++ S NKR++ +G D D + R+ + K K R+
Sbjct: 393 RECEIKLEASHFDEKKEINKRKQMILEGKDPDLEAKRKAELAKIKQQNRR 442
>sp|Q8L4E9|RH36_ORYSJ DEAD-box ATP-dependent RNA helicase 36 OS=Oryza sativa subsp.
japonica GN=Os07g0633500 PE=3 SV=1
Length = 501
Score = 308 bits (790), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 163/372 (43%), Positives = 235/372 (63%), Gaps = 12/372 (3%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G+D++G+A+TGSGKT AFALPIL L E+ V A L+PTRELA Q++EQF A
Sbjct: 114 GRDVLGIAETGSGKTAAFALPILHRL---GEDPYGVAAL---ALAPTRELAAQLAEQFRA 167
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS--LGTLKYLV 126
LG+ + LRC +GG D + Q L +RPH+VVATPGR+ + + + K+LV
Sbjct: 168 LGAPLGLRCLAAIGGFDSLGQAKGLARRPHVVVATPGRIATLINDDPDLAKVFARTKFLV 227
Query: 127 LDEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKY 186
LDEADR+L+ +FE+ L I +P+ RQT+LFSAT++ ++ L N EA +
Sbjct: 228 LDEADRVLDINFEEDLRVIFGSLPKKRQTFLFSATISDNLRSLLELSGNNSYFFEAYEGF 287
Query: 187 STVDTLKQQYRFVPAKYKDCYLVYILTEVSAS---STMVFTRTCDATRLLALMLRNLGQR 243
TVDTLKQ Y VP K+ YL Y+L++++ S +VF TC + L +L LG
Sbjct: 288 KTVDTLKQLYIHVPPDAKELYLFYLLSKMNEDNIRSVIVFVSTCRTCQYLDFLLEELGHP 347
Query: 244 AIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIH 303
A+ + H QS+RL AL+ FK+ + +L+ TDVASRGLDI +VD+VINYD+P +DYIH
Sbjct: 348 AVSLHSHKPQSRRLAALHNFKSSKVPVLLATDVASRGLDIQTVDLVINYDVPRYPRDYIH 407
Query: 304 RVGRTARAGRTGVAISLV-NQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKR 362
RVGRTARA R G++IS + Q ++ +IE ++GK+L + E +V +V +A+R
Sbjct: 408 RVGRTARATRGGLSISFITTQRDIRLLHEIEDVVGKQLGAYDGEMRDVNKDATKVFKARR 467
Query: 363 ISQMTIKDSGNK 374
++ M + D G++
Sbjct: 468 LANMKMADEGHE 479
>sp|Q8SR63|RRP3_ENCCU ATP-dependent rRNA helicase RRP3 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=RRP3 PE=3 SV=1
Length = 400
Score = 307 bits (786), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 164/370 (44%), Positives = 228/370 (61%), Gaps = 7/370 (1%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
G D+I ++QTGSGKT AF LPI+ LL+ +N+ +F+ V++PTREL+ QI+E F
Sbjct: 37 GGGDVIAVSQTGSGKTLAFVLPIVSHLLQ--KNR----SFYCLVVAPTRELSSQIAECFN 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
LR +LVGG + Q L KRPH+VV TPGR+ +H+ TK F ++ VL
Sbjct: 91 MF-QATGLRVCLLVGGANFNVQANQLSKRPHVVVGTPGRIAEHVLKTKSFRTERVRKFVL 149
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKKLQRACLKNPVKIEAASKYS 187
DEADR DF + L+ I+ + RQT LF+ATM+ ++ KL + LK P I A KY
Sbjct: 150 DEADRFFEQDFVEDLETIIPSLREKRQTLLFTATMSDEISKLSSSILKRPKTIRTAEKYE 209
Query: 188 TVDTLKQQYRFVPAKYKDCYLVYILTEVSASSTMVFTRTCDATRLLALMLRNLGQRAIPI 247
TV LK+ Y FV K+K+ LV +L S +VF C R+++L L LG + +
Sbjct: 210 TVPALKEYYLFVAMKWKNSALVELLEMSQGMSVIVFVSMCVTARVMSLALARLGFCSEAL 269
Query: 248 SGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNSKDYIHRVGR 307
G +SQ KR A+ FK N+L+CTD+ SRGLDI VD+VIN+D+P + KDYIHRVGR
Sbjct: 270 HGELSQEKREEAMRSFKESRFNVLVCTDLGSRGLDISHVDLVINFDVPKSGKDYIHRVGR 329
Query: 308 TARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERVTEAKRISQMT 367
TARAGR+G AI+LV QY++E +IE + KKL EF ++ + R+ EA + +Q T
Sbjct: 330 TARAGRSGTAITLVTQYDVEQIQKIEFTLEKKLEEFKMMKKNFGTICARIEEAIQEAQET 389
Query: 368 IKDSGNKRRR 377
+K+ + RR
Sbjct: 390 LKEERKRNRR 399
>sp|Q9HGM5|DBP8_SCHPO ATP-dependent RNA helicase dbp8 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dbp8 PE=3 SV=1
Length = 453
Score = 297 bits (761), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 167/388 (43%), Positives = 248/388 (63%), Gaps = 21/388 (5%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G++ IG A+TGSGKT AFALPI++ + FA +L+PTRELAIQI EQF A
Sbjct: 44 GRNCIGGAKTGSGKTAAFALPIIEKW------SKDPSGIFALILTPTRELAIQIDEQFAA 97
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYL 125
LG+ ++L+ A++VGG+DM++Q++ L KRPH+VVATPGRL D + + ++ L K+L
Sbjct: 98 LGANLNLKHALIVGGMDMIRQSIDLSKRPHVVVATPGRLADLIRSNGEETIAGLRRIKFL 157
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRM--RQTYLFSATMTKKVKKLQRACLKN---PV-- 178
V+DEADRLL+ F LD+ +V+P RQT LF+AT+T +++L+ KN P+
Sbjct: 158 VMDEADRLLSPTFADDLDDCFSVLPASEDRQTLLFTATVTDAIRQLKYQPQKNNKPPLWL 217
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLAL 235
++E S TL+Q Y FV ++ ++ YLV++LT E + S ++F L+
Sbjct: 218 YEVET-DNISVPSTLQQSYIFVSSQVREAYLVHLLTIPENAKKSAIIFVNRTRTAELIYS 276
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
+LR L R + M Q +R+ +L +F+A IL+ TDVASRGLDIPSV +VIN+D+P
Sbjct: 277 ILRLLELRVTELHSEMVQRERINSLGRFRAEAAKILVATDVASRGLDIPSVQLVINFDLP 336
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFP-AEEEEVLLLL 354
+ DYIHRVGRTARAGR+G +IS+V + +++ IE +G KL E+ E ++L +
Sbjct: 337 RDPDDYIHRVGRTARAGRSGESISIVTERDVDLVHAIEDRVGTKLSEYEHVSENKMLEYI 396
Query: 355 ERVTEAKRISQMTIKDSGNKRRRKGGDE 382
+ VT+AKR + + + D G RR+ +E
Sbjct: 397 KEVTDAKRQASLEMIDRGFGERRQKRNE 424
>sp|Q6BGU8|DBP8_DEBHA ATP-dependent RNA helicase DBP8 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DBP8 PE=3 SV=2
Length = 441
Score = 292 bits (747), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 178/406 (43%), Positives = 247/406 (60%), Gaps = 40/406 (9%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D IG A+TGSGKT AFA P+L E + VL+PTRELA+QI+EQF A
Sbjct: 38 GHDCIGGAKTGSGKTIAFAAPMLTQWSEDPS------GIYGLVLTPTRELALQIAEQFAA 91
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFS---LGTLKYL 125
LGS ++++ +V+VGG D+++Q L L +RPH VVATPGRL DH+ N+ + L +KYL
Sbjct: 92 LGSSMNIKVSVIVGGEDIVKQALELQRRPHFVVATPGRLADHILNSGEDTVCGLRRVKYL 151
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRM--RQTYLFSATMTKKVKKLQRACL---KNPV-- 178
+LDEADRLL++ F L+ N++P RQT LF+AT+T V+ L+ + K PV
Sbjct: 152 ILDEADRLLSNSFGGDLERCFNILPSTDKRQTLLFTATVTDAVRALKDRPVPKGKLPVFI 211
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYILT--EVSASSTMVFTRTCDATRLLAL 235
++E K + TL +Y FVP+ K+ YL IL + S S +++FT LL
Sbjct: 212 HEVETVDKVAIPSTLSVKYVFVPSYVKEAYLHSILNLPQYSDSLSIIFTNRTATAELLRR 271
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
LR L R + M Q++R +L++FKAG ILI TDVASRGLDIP+V++V+NYDIP
Sbjct: 272 TLRKLEFRVASLHSEMPQTERTNSLHRFKAGAAKILIATDVASRGLDIPTVELVVNYDIP 331
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLE 355
++ D+IHRVGRTARAGR G AIS+V + +++ L IE+ I KK+ L+E
Sbjct: 332 ADADDFIHRVGRTARAGRKGDAISIVAEKDVDRILAIEERINKKMD-----------LIE 380
Query: 356 RVTEAKRISQMTIKDSGNK----RRRKGGDED-DDIGRQFGINKKK 396
+++ K IKDS NK +R D D ++ G + INK K
Sbjct: 381 DISDNK-----VIKDSLNKTSVAKREAFMDMDRENFGEKRKINKSK 421
>sp|Q59PR3|DBP8_CANAL ATP-dependent RNA helicase DBP8 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DBP8 PE=3 SV=1
Length = 440
Score = 289 bits (739), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 172/401 (42%), Positives = 242/401 (60%), Gaps = 30/401 (7%)
Query: 9 GKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFEA 68
G D IG A+TGSGKT AFA P+L + +E+ + F +L+PTRELA+QI+EQF A
Sbjct: 38 GHDCIGGAKTGSGKTIAFAAPMLT---QWSEDPFGI---FGLILTPTRELALQIAEQFAA 91
Query: 69 LGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KYL 125
LG+ ++++ AV+VGG D +QQTLAL ++PH V+ATPGRL DH+ N+ ++ L KYL
Sbjct: 92 LGANMNIKVAVVVGGEDFVQQTLALQRKPHFVIATPGRLADHILNSGEETISGLRRVKYL 151
Query: 126 VLDEADRLLNDDFEKSLDEILNVIPRM--RQTYLFSATMTKKVKKLQRACL---KNPV-- 178
VLDEADRLL++ F L +V+P RQT LF+AT+T V+ L+ K PV
Sbjct: 152 VLDEADRLLSNSFGSDLQRCFDVLPTSDKRQTLLFTATITDAVRALKEKPPTPGKPPVFM 211
Query: 179 -KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL--TEVSASSTMVFTRTCDATRLLAL 235
++E K + TL+ Y FVP+ K+ YL IL + S+ ++F +L
Sbjct: 212 HEVETVDKVAIPSTLQISYVFVPSYVKEAYLNSILHLEQFKDSTAVIFVNRTTTAEVLRR 271
Query: 236 MLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIP 295
MLR L R + M QS+R +L++FKAG ILI TDVASRGLDIP+V++VIN+DIP
Sbjct: 272 MLRKLDFRVASLHSEMPQSERTNSLHRFKAGAARILIATDVASRGLDIPTVELVINFDIP 331
Query: 296 TNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLE 355
+ D+IHRVGRTARAGR G A+S++ + +++ IE+ I KK+ LLE
Sbjct: 332 ADPDDFIHRVGRTARAGRKGDAVSIIGEKDIDRIQSIEERINKKME-----------LLE 380
Query: 356 RVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKK 396
V + I + S KR + ++ G + IN+KK
Sbjct: 381 DVNDDNVIKESLSATSVAKRESLMEMDKENFGERKKINRKK 421
>sp|A3LP87|DBP8_PICST ATP-dependent RNA helicase DBP8 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=DBP8 PE=3 SV=2
Length = 445
Score = 285 bits (729), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 169/402 (42%), Positives = 244/402 (60%), Gaps = 30/402 (7%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
+G D IG A+TGSGKT AFA P+L + +E+ + F VL+PTRELA+QI+EQF
Sbjct: 37 SGHDCIGGAKTGSGKTIAFAAPMLT---QWSEDPFGI---FGLVLTPTRELALQIAEQFA 90
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTL---KY 124
ALG+ ++++ +V+VGG D ++QTL L K+PH V+ATPGRL DH+ N+ ++ L KY
Sbjct: 91 ALGASMNIKISVVVGGEDFVKQTLELQKKPHFVIATPGRLADHILNSGEETISGLRRIKY 150
Query: 125 LVLDEADRLLNDDFEKSLDEILNVIP--RMRQTYLFSATMTKKVKKLQR---ACLKNPV- 178
LVLDEADRLL++ F L+ +V+P RQT LF+AT+T V+ L+ A K PV
Sbjct: 151 LVLDEADRLLSNSFGGDLERCFSVLPPSEKRQTCLFTATVTDAVRALKEKPPAQGKPPVF 210
Query: 179 --KIEAASKYSTVDTLKQQYRFVPAKYKDCYLVYIL--TEVSASSTMVFTRTCDATRLLA 234
++E + + TL +Y FVP+ K+ YL IL + S+ ++F +L
Sbjct: 211 LHEVETVDQVAIPSTLSIKYVFVPSYVKEAYLNSILRLPQYEKSTAVIFVNRTTTAEVLR 270
Query: 235 LMLRNLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDI 294
LR L R + M QS+R ++ +FKAG ILI TDVASRGLDIPSV++V+N+DI
Sbjct: 271 RTLRKLEFRVASLHSEMPQSERTNSVQRFKAGAARILIATDVASRGLDIPSVELVVNFDI 330
Query: 295 PTNSKDYIHRVGRTARAGRTGVAISLVNQYELEWYLQIEKLIGKKLPEFPAEEEEVLLLL 354
P + D+IHRVGRTARAGR+G A++++ + +++ IE+ I KK+ LL
Sbjct: 331 PADPDDFIHRVGRTARAGRSGDAVTIIAEKDIDRIASIEERINKKME-----------LL 379
Query: 355 ERVTEAKRISQMTIKDSGNKRRRKGGDEDDDIGRQFGINKKK 396
E VT+ I+ S KR + ++ G + IN+KK
Sbjct: 380 EEVTDDSVITDSLTATSVAKRESLMEMDKENFGEKRKINRKK 421
>sp|Q07886|DDX49_DROME Probable ATP-dependent RNA helicase Dbp45A OS=Drosophila
melanogaster GN=Dbp45A PE=2 SV=2
Length = 521
Score = 283 bits (725), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 169/396 (42%), Positives = 234/396 (59%), Gaps = 30/396 (7%)
Query: 8 AGKDLIGLAQTGSGKTGAFALPILQALLEIAENQRTVPAFFACVLSPTRELAIQISEQFE 67
AG+D IG A+TGSGKT AFALPIL+ L E + FA VL+PT ELA QISEQF
Sbjct: 43 AGQDCIGAAKTGSGKTFAFALPILERLSE------EPVSHFALVLTPTHELAYQISEQFL 96
Query: 68 ALGSGISLRCAVLVGGVDMMQQTLALGKRPHIVVATPGRLMDHLTNTKGFSLGTLKYLVL 127
G + +R V+ GG D M ++ L +RPHIVVA PGRL DHLT FS LKYLV+
Sbjct: 97 VAGQAMGVRVCVVSGGTDQMVESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVV 156
Query: 128 DEADRLLNDDFEKSLDEILNVIPRMRQTYLFSATMTKKVKK-----LQRACLKNPVKIEA 182
DEADR+LN DF++SL I +P+ RQ FSATM +K+ + C +
Sbjct: 157 DEADRMLNGDFDESLSIIERCLPKTRQNLFFSATMKDFIKESSIFPIASDCF----EWSQ 212
Query: 183 ASKYSTVDTLKQQYRFVPAKYKDCYLVYIL----TEVSASSTMVFTRTCDATRLLALMLR 238
S +TV+TL Q+Y +D L+ L E ++ M+FT T +LL++ L+
Sbjct: 213 DSDVATVETLDQRYLLCADYDRDMVLIEALRKYREENENANVMIFTNTKKYCQLLSMTLK 272
Query: 239 NLGQRAIPISGHMSQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTNS 298
N+ + + G M Q +R+ AL++FK+ + LI TDVA+RGLDIPSV++V+N+ +P
Sbjct: 273 NMEIDNVCLHGFMRQKERVAALSRFKSNQIRTLIATDVAARGLDIPSVELVMNHMLPRTP 332
Query: 299 KDYIHRVGRTARAGRTGVAISLVN-QYELEWYLQIEKLIGKKLPEFPAEEEEVLLLLERV 357
K+YIHRVGRTARAGR G++IS+ +LE IE+ I KL E P ++ V + +V
Sbjct: 333 KEYIHRVGRTARAGRKGMSISIFRFPRDLELLAAIEEEINTKLTEHPIDQRMVERIFMQV 392
Query: 358 TEAKRISQMTIKDSG------NKRRR----KGGDED 383
+R S+M + ++ N RR+ +G D D
Sbjct: 393 NVTRRESEMQLDNNDFDERAQNYRRKTWIMEGKDPD 428
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,504,376
Number of Sequences: 539616
Number of extensions: 5690388
Number of successful extensions: 21973
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1405
Number of HSP's successfully gapped in prelim test: 301
Number of HSP's that attempted gapping in prelim test: 16140
Number of HSP's gapped (non-prelim): 2121
length of query: 401
length of database: 191,569,459
effective HSP length: 120
effective length of query: 281
effective length of database: 126,815,539
effective search space: 35635166459
effective search space used: 35635166459
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)