Your job contains 1 sequence.
>015760
MSSQRNQGGIVRIKELAMHVKHKVNLLGVVLEFSIPRKSQGTDYVCVLKIVDDSQQSPEL
LVNIFTSSIDQLPRVLSPRDLILLKNVMIKKHQAELSAVFYKDSSSFALFDGNSGSNLLP
YQSSPQRFEITEAEERRINVLRQWCVGFEFSSGSNDYLLSLKDISEHRYFDLVCKVFHVS
YDDSKGLWMLFVWDGTDVPPLSIPGKLEDEEHNPLPLHIESSPLDLETLRNFFPVGTVLR
VSTDRSYENFGRYFTATGKWVRIRNMSCQVSSGMWHGLLQSSSKIRLFSDNDNVVWDYMR
ERISGGHGHMPIWTDPSSQFLTEVDWVNVASVTLMKIATQLQGNVRCCCIVRVVSIHPFQ
AEHYSSPNGSSEYTMKLTLEDPTARIHALLCGKEWVRFQLG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015760
(401 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2051214 - symbol:AtPOT1a "Protection of Telome... 473 5.6e-45 1
TAIR|locus:2164295 - symbol:AtPOT1b "protection of telome... 438 2.8e-41 1
UNIPROTKB|F1NSB0 - symbol:POT1 "Protection of telomeres p... 223 2.2e-15 1
UNIPROTKB|P62597 - symbol:POT1 "Protection of telomeres p... 223 2.2e-15 1
UNIPROTKB|E1BGK3 - symbol:POT1 "Uncharacterized protein" ... 209 8.4e-14 1
UNIPROTKB|F1P716 - symbol:POT1 "Uncharacterized protein" ... 208 1.1e-13 1
UNIPROTKB|Q9NUX5 - symbol:POT1 "Protection of telomeres p... 206 1.3e-13 1
UNIPROTKB|Q95K48 - symbol:POT1 "Protection of telomeres p... 206 1.3e-13 1
ZFIN|ZDB-GENE-110324-1 - symbol:pot1 "protection of telom... 200 8.4e-13 1
RGD|1582873 - symbol:Pot1b "protection of telomeres 1B" s... 187 1.8e-11 1
MGI|MGI:2141503 - symbol:Pot1a "protection of telomeres 1... 186 2.3e-11 1
RGD|1562696 - symbol:Pot1 "protection of telomeres 1" spe... 184 3.2e-11 1
UNIPROTKB|F1NFN1 - symbol:POT1 "Protection of telomeres p... 119 0.00048 1
>TAIR|locus:2051214 [details] [associations]
symbol:AtPOT1a "Protection of Telomeres 1a" species:3702
"Arabidopsis thaliana" [GO:0000723 "telomere maintenance"
evidence=IEA;IMP] [GO:0000784 "nuclear chromosome, telomeric
region" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0032206 "positive regulation of telomere maintenance"
evidence=IMP] [GO:0043047 "single-stranded telomeric DNA binding"
evidence=TAS] [GO:0032212 "positive regulation of telomere
maintenance via telomerase" evidence=IMP] [GO:0042162 "telomeric
DNA binding" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR011564 Pfam:PF02765 SMART:SM00976
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000784
GO:GO:0000723 EMBL:AC007018 GO:GO:0043047 GO:GO:0032212
EMBL:AY553323 EMBL:AB195819 EMBL:AY884593 EMBL:AK221471
IPI:IPI00526601 IPI:IPI00619873 IPI:IPI00656773 PIR:A84466
RefSeq:NP_001118270.1 RefSeq:NP_001118271.1 RefSeq:NP_178592.3
UniGene:At.48422 ProteinModelPortal:Q56Y52 IntAct:Q56Y52
MINT:MINT-1212523 STRING:Q56Y52 PRIDE:Q56Y52
EnsemblPlants:AT2G05210.1 EnsemblPlants:AT2G05210.2
EnsemblPlants:AT2G05210.3 GeneID:815069 KEGG:ath:AT2G05210
TAIR:At2g05210 eggNOG:NOG250911 HOGENOM:HOG000244242
InParanoid:Q56Y52 OMA:HEEEALY PhylomeDB:Q56Y52
ProtClustDB:CLSN2681688 Genevestigator:Q56Y52 Uniprot:Q56Y52
Length = 467
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 130/412 (31%), Positives = 210/412 (50%)
Query: 1 MSSQRNQGGIVRIKELAMHVKHKVNLLGVVLEFSIPRKSQGTDYVCVLKIVDDSQQSPEL 60
M+ +R +++IK+ + +V+L+G+VLE P++ + D++C L+I+DD+ SP L
Sbjct: 1 MAKKRESPKLIKIKDAIKLINQQVSLIGIVLEQREPKQCRNNDWICTLRIIDDTYPSPGL 60
Query: 61 LVNIFTSSIDQLPRVLSPRDLILLKNVMIKKHQA--ELSAVFYKDSSSFALFDGNSGSNL 118
VN+F+ +++QLP++ + D+IL + ++ + ++A + SSFALF+G +
Sbjct: 61 TVNVFSKTLEQLPQIKNHDDMILFTRIKMQTFDSGERVNAACSRWVSSFALFEG---VDF 117
Query: 119 LPYQSSPQRFEITEAEERRINVLRQWCVGFE-----FSSGS------NDYLLSLKDISEH 167
+ YQ S E + ++ LR+ G S S ++ L++I
Sbjct: 118 VCYQCSTNFHEEEALYKSAMDDLRKVFAGCSQVIKAMQSISYRTKPCSEVFSFLREIKIG 177
Query: 168 RYFDLVCKVFHVSYDDSKGLWMLFVWDGTDVPPLSIPGKL--EDEEHNPLPLHIESSPLD 225
+ FDLVC++ H D S +FVWDGTD PP SI K ED+ + L +H + L
Sbjct: 178 KRFDLVCRILHADEDTSA----VFVWDGTDAPPASILAKRSEEDKAFSSLSVH---TLLS 230
Query: 226 LETLRNFFPVGTVLRVSTDRSYENFGRYFTATGKWVRIRNMSCQVSSGMWHGLLQSSSKI 285
+ L +F VGT+LRV S F Y G WV++ ++ C+V G W + SS+K+
Sbjct: 231 RDVLLSFPTVGTILRVHL--SSHLF--YRVKPGDWVKLYHLLCEVDRGSWVIKVTSSTKV 286
Query: 286 RLFSDNDNVVWDYMR---ERISGGHGHMPIWTDPSSQFLTEVDWVNVASVTLMKIATQLQ 342
+ +D +V MR +R+S GH+ W PS LTE D VTLM I T +
Sbjct: 287 HHLAQDDRLVEKIMRIYDKRLSSKLGHISFWCFPSPPGLTETDDNCAPFVTLMDIITFPK 346
Query: 343 GNXXXXXXXXXXSIHPFQAEHYSSPNGSSEYTMKLTLEDPTARIHALLCGKE 394
+ +P+Q E + S + + LTLED TA + A LC K+
Sbjct: 347 VTCKYRCIVRVVAAYPWQVEDFCSDENRRHHQVLLTLEDSTATLEAFLCNKD 398
>TAIR|locus:2164295 [details] [associations]
symbol:AtPOT1b "protection of telomeres 1b" species:3702
"Arabidopsis thaliana" [GO:0000723 "telomere maintenance"
evidence=IEA;IMP] [GO:0000784 "nuclear chromosome, telomeric
region" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016233 "telomere
capping" evidence=IMP] [GO:0043047 "single-stranded telomeric DNA
binding" evidence=TAS] InterPro:IPR011564 Pfam:PF02765
SMART:SM00976 EMBL:CP002688 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0000784 GO:GO:0016233 EMBL:AB006700
GO:GO:0043047 HOGENOM:HOG000244242 EMBL:AB195820 EMBL:AY884594
EMBL:BT012568 EMBL:AK221379 IPI:IPI00520954 IPI:IPI00619860
RefSeq:NP_196249.2 UniGene:At.66731 UniGene:At.70127
ProteinModelPortal:Q6NKX5 IntAct:Q6NKX5 STRING:Q6NKX5 PRIDE:Q6NKX5
EnsemblPlants:AT5G06310.1 GeneID:830519 KEGG:ath:AT5G06310
TAIR:At5g06310 eggNOG:NOG284004 InParanoid:Q6NKX5 OMA:PPWVQCC
PhylomeDB:Q6NKX5 ProtClustDB:CLSN2918864 Genevestigator:Q6NKX5
Uniprot:Q6NKX5
Length = 454
Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 132/401 (32%), Positives = 198/401 (49%)
Query: 4 QRNQGGIVRIKEL--AMHVKHKVNLLGVVLEFSIPRKSQGTDYVCVLKIVDDSQQSPELL 61
+R+ +RI++ A+H+ H VNL+GV++E S G+D C LKIVD L
Sbjct: 5 RRDDYKFLRIQDAFKALHL-H-VNLIGVIVELGF---SNGSDCSCTLKIVDPWYSGSGLP 59
Query: 62 VNIFTSSIDQLPRVLSPRDLILLKNVMIKKHQAELSAVFYKD-SSSFALFDGNSGSNLLP 120
V +I LPRV S D+ILL V I +++A+ + SSSFALF+G + +P
Sbjct: 60 VKFVARTIRDLPRVESIGDIILLSRVKIVLINRKITALCNETTSSSFALFNGKHSVDSIP 119
Query: 121 YQSSPQRFEITEAEERRINVLRQWCVGFEFSSGSNDYLLSLKDISEHRYFDLVCKVFHVS 180
YQSSP +F + E ++ ++ LR+W + ++F GS + SLKDI E +L C++ H+S
Sbjct: 120 YQSSP-KFLMREQDKNFLSNLREWMITYKFEDGSCCFT-SLKDIKEGECSNLSCQIVHIS 177
Query: 181 YDDSKGLWMLFVWDGTDVPPLSIPGKLEDEEHNPLPLHIESSPLDLETLRNFFPVGTVLR 240
K W LFVWDGT++PP +I K E LPL +E L LR F G+VLR
Sbjct: 178 -KVYKDRWYLFVWDGTEMPPCNILVKSER-----LPLCVEPEMLPTYMLRKFPTFGSVLR 231
Query: 241 VSTDRSYENFGRYFTATGKWVRIRNMSCQVSSGMWHGLLQSSSKIRLFSDNDNVVWDYMR 300
+ DR E + G+ V++ N+ QV+ G+W+ S+K++ + + R
Sbjct: 232 IIVDRVSEKQAIHCLQPGQHVKLLNLFFQVNMGLWNATFTPSTKMQYTMSREMEAFSPQR 291
Query: 301 ---ERISGGHGHMPIWTDPSSQFLTEVDWVNVASVTLMKIATQLQGNXXXXXXXXXXSIH 357
E+ S + S +T V + V+LM I T ++
Sbjct: 292 MCGEKFSPRWNPIARCISRSHSEITGVAHDDAPFVSLMDILTYHNVTAKFRCVVRFIQVY 351
Query: 358 PFQAEHYSSPNGSSEYTMKLTLEDPTARIHALLCGKEWVRF 398
P NG+ + + LED TARIHA L E +F
Sbjct: 352 PRDVRKLRDINGNIK--LVAILEDATARIHASLYADEGEKF 390
>UNIPROTKB|F1NSB0 [details] [associations]
symbol:POT1 "Protection of telomeres protein 1"
species:9031 "Gallus gallus" [GO:0000783 "nuclear telomere cap
complex" evidence=IEA] [GO:0007004 "telomere maintenance via
telomerase" evidence=IEA] [GO:0010521 "telomerase inhibitor
activity" evidence=IEA] [GO:0016233 "telomere capping"
evidence=IEA] [GO:0017151 "DEAD/H-box RNA helicase binding"
evidence=IEA] [GO:0032203 "telomere formation via telomerase"
evidence=IEA] [GO:0032211 "negative regulation of telomere
maintenance via telomerase" evidence=IEA] [GO:0032212 "positive
regulation of telomere maintenance via telomerase" evidence=IEA]
[GO:0032508 "DNA duplex unwinding" evidence=IEA] [GO:0043047
"single-stranded telomeric DNA binding" evidence=IEA] [GO:0051096
"positive regulation of helicase activity" evidence=IEA]
[GO:0051973 "positive regulation of telomerase activity"
evidence=IEA] [GO:0060383 "positive regulation of DNA strand
elongation" evidence=IEA] InterPro:IPR011564 Pfam:PF02765
SMART:SM00976 GO:GO:0000783 GO:GO:0032211 GO:GO:0051973
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0016233
GO:GO:0007004 GO:GO:0043047 GO:GO:0010521 GO:GO:0032508
GO:GO:0032203 GO:GO:0032212 GO:GO:0051096 IPI:IPI00599480
OMA:TSWIPSS GO:GO:0060383 GeneTree:ENSGT00390000018285
EMBL:AADN02010261 EMBL:AADN02010262 EMBL:AADN02010263
EMBL:AADN02010264 EMBL:AADN02010265 Ensembl:ENSGALT00000014222
ArrayExpress:F1NSB0 Uniprot:F1NSB0
Length = 778
Score = 223 (83.6 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 62/225 (27%), Positives = 111/225 (49%)
Query: 24 VNLLGVVLEFSIPRKSQGTDYVCVLKIVDDSQQSPELLVNIFTSSIDQLPRVLSPRDLIL 83
VNL G+V F P S+GTDY V+ +VD Q + +L +F ++D LP++ D++
Sbjct: 167 VNLYGIVKFFKPPYISKGTDYCSVVTLVD--QSNVKLTCTLFNGNLDSLPKIYKNGDIVR 224
Query: 84 LKNVMIKKHQAELSAVFYKDSSSFA--LFDGNSGSNLLPYQSSPQRFEITEAEERRINVL 141
V I+++ ++ + S+ FA FDG G+ ++P SS + + + E++ + L
Sbjct: 225 FHRVKIREYNGQMQGI---TSAGFASLTFDGTVGAPVVPRASS-KVYTFVDEEQKTVEEL 280
Query: 142 RQWCVGFEFSSGSNDYLLSLKDISEHRYFDLVCKVFHVSYDDSKGLWMLFVWDGTDVP-P 200
R W SG L D+ +FDL C++ + D ++L VWDGT P P
Sbjct: 281 RIWAASNLSVSGPE---AKLSDVKPMMFFDLTCQLVGKAKVDGSS-FLLKVWDGTKCPYP 336
Query: 201 L-SIPGKLEDEEHNPLPLH-IESSPLDLETLRNFFPVGTVLRVST 243
+P + ++ E + + LH + + +D+ N + L+ +
Sbjct: 337 TWKVPVEAKELEGDRVLLHHLRNLTVDVLVYDNHVQLAKSLKTGS 381
>UNIPROTKB|P62597 [details] [associations]
symbol:POT1 "Protection of telomeres protein 1"
species:9031 "Gallus gallus" [GO:0000784 "nuclear chromosome,
telomeric region" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=ISS] [GO:0007004 "telomere maintenance via
telomerase" evidence=ISS] [GO:0043047 "single-stranded telomeric
DNA binding" evidence=ISS] [GO:0000723 "telomere maintenance"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
InterPro:IPR011564 Pfam:PF02765 SMART:SM00976 GO:GO:0005654
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000784
GO:GO:0000781 GO:GO:0007004 GO:GO:0043047 Reactome:REACT_115612
eggNOG:NOG284004 KO:K11109 EMBL:AY555718 IPI:IPI00599480
RefSeq:NP_996875.1 UniGene:Gga.11620 ProteinModelPortal:P62597
SMR:P62597 STRING:P62597 PRIDE:P62597 GeneID:404538 KEGG:gga:404538
CTD:25913 HOGENOM:HOG000015271 HOVERGEN:HBG053641 InParanoid:P62597
OrthoDB:EOG44F695 NextBio:20817662 Uniprot:P62597
Length = 778
Score = 223 (83.6 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 62/225 (27%), Positives = 111/225 (49%)
Query: 24 VNLLGVVLEFSIPRKSQGTDYVCVLKIVDDSQQSPELLVNIFTSSIDQLPRVLSPRDLIL 83
VNL G+V F P S+GTDY V+ +VD Q + +L +F ++D LP++ D++
Sbjct: 167 VNLYGIVKFFKPPYISKGTDYCSVVTLVD--QSNVKLTCTLFNGNLDSLPKIYKNGDIVR 224
Query: 84 LKNVMIKKHQAELSAVFYKDSSSFA--LFDGNSGSNLLPYQSSPQRFEITEAEERRINVL 141
V I+++ ++ + S+ FA FDG G+ ++P SS + + + E++ + L
Sbjct: 225 FHRVKIREYNGQMQGI---TSAGFASLTFDGTVGAPVVPRASS-KVYTFVDEEQKTVEEL 280
Query: 142 RQWCVGFEFSSGSNDYLLSLKDISEHRYFDLVCKVFHVSYDDSKGLWMLFVWDGTDVP-P 200
R W SG L D+ +FDL C++ + D ++L VWDGT P P
Sbjct: 281 RIWAASNLSVSGPE---AKLSDVKPMMFFDLTCQLVGKAKVDGSS-FLLKVWDGTKCPYP 336
Query: 201 L-SIPGKLEDEEHNPLPLH-IESSPLDLETLRNFFPVGTVLRVST 243
+P + ++ E + + LH + + +D+ N + L+ +
Sbjct: 337 TWKVPVEAKELEGDRVLLHHLRNLTVDVLVYDNHVQLAKSLKTGS 381
>UNIPROTKB|E1BGK3 [details] [associations]
symbol:POT1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060383 "positive regulation of DNA strand elongation"
evidence=IEA] [GO:0051973 "positive regulation of telomerase
activity" evidence=IEA] [GO:0051096 "positive regulation of
helicase activity" evidence=IEA] [GO:0043047 "single-stranded
telomeric DNA binding" evidence=IEA] [GO:0032508 "DNA duplex
unwinding" evidence=IEA] [GO:0032212 "positive regulation of
telomere maintenance via telomerase" evidence=IEA] [GO:0032211
"negative regulation of telomere maintenance via telomerase"
evidence=IEA] [GO:0032203 "telomere formation via telomerase"
evidence=IEA] [GO:0017151 "DEAD/H-box RNA helicase binding"
evidence=IEA] [GO:0016233 "telomere capping" evidence=IEA]
[GO:0010521 "telomerase inhibitor activity" evidence=IEA]
[GO:0007004 "telomere maintenance via telomerase" evidence=IEA]
[GO:0000783 "nuclear telomere cap complex" evidence=IEA]
InterPro:IPR011564 Pfam:PF02765 SMART:SM00976 GO:GO:0000783
GO:GO:0032211 GO:GO:0051973 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0016233 GO:GO:0007004 GO:GO:0043047
GO:GO:0010521 GO:GO:0032508 GO:GO:0032203 GO:GO:0032212
GO:GO:0051096 OMA:TSWIPSS GO:GO:0060383
GeneTree:ENSGT00390000018285 EMBL:DAAA02011435 EMBL:DAAA02011436
EMBL:DAAA02011437 EMBL:DAAA02011438 IPI:IPI00685273
Ensembl:ENSBTAT00000017541 Uniprot:E1BGK3
Length = 782
Score = 209 (78.6 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 77/292 (26%), Positives = 135/292 (46%)
Query: 24 VNLLGVVLEFSIPRKSQGTDYVCVLKIVDDSQQSPELLVNIFTSSIDQLPRVLSPRDLIL 83
VN+ GVV F P S+GTDY V+ IVD Q + +L F+ + + LP + D++
Sbjct: 171 VNVYGVVKFFKPPYLSRGTDYCSVVTIVD--QTNVKLTCLFFSGNYEALPMIYKNGDIVR 228
Query: 84 LKNVMIKKHQAELSAVFYKDSSSFA--LFDGNSGSNLLPYQSSPQRFEITEAEERRINVL 141
+ I+ ++ E + SS FA F+G G+ ++P +S + F T +++ + L
Sbjct: 229 FHRLKIQVYKKETQGI---TSSGFASLTFEGTLGAPIIPRTAS-KCFNFTAEDQKMVEAL 284
Query: 142 RQWCVGFEFSSGSNDYLLSLKDISEHRYFDLVCKVFHVSYDDSKGLWMLFVWDGTDVPPL 201
R W S S L+ L D+ +YFDL C++ + D ++L VWDGT P
Sbjct: 285 RIWA-STHISPSS--ILVKLCDVQPMQYFDLTCQLLGKAEVDGAS-FLLKVWDGTRTPFP 340
Query: 202 SIPGKLEDE--EHNPLPLH-IESSPLDLETLRNFFPVGTVLRVSTDRSYENFGRYFTATG 258
S ++D E + +H +++ D+ N V L+V + F R ++
Sbjct: 341 SWRVLMQDLALEGDLSRIHQLQNLTADILVYDNHVQVAKSLKVGS------FLRIYSLHT 394
Query: 259 KWVRIRNMSCQVSSGM---WHGLLQSSSKIRLFSDNDNVVWDYMRERISGGH 307
K + + + S + HG IR+ +N++ V D +++ + H
Sbjct: 395 KLQSVSSENLATSLALEFHLHGGTSYGRGIRVLPENNSDV-DQLKKILESAH 445
>UNIPROTKB|F1P716 [details] [associations]
symbol:POT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000784 "nuclear chromosome, telomeric region" evidence=IEA]
[GO:0000723 "telomere maintenance" evidence=IEA] InterPro:IPR011564
Pfam:PF02765 SMART:SM00976 GO:GO:0003677 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000784 GO:GO:0000723
OMA:TSWIPSS GeneTree:ENSGT00390000018285 EMBL:AAEX03009277
Ensembl:ENSCAFT00000002746 Uniprot:F1P716
Length = 785
Score = 208 (78.3 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 66/225 (29%), Positives = 111/225 (49%)
Query: 24 VNLLGVVLEFSIPRKSQGTDYVCVLKIVDDSQQSPELLVNIFTSSIDQLPRVLSPRDLIL 83
VN+ GVV F P S+GTDY V+ IVD Q + +L +F+ + + LP + D++
Sbjct: 170 VNVYGVVKFFKPPYLSKGTDYCSVVTIVD--QTNVKLTCMLFSGNYEALPIIYKNGDIVR 227
Query: 84 LKNVMIKKHQAELSAVFYKDSSSFA--LFDGNSGSNLLPYQSSPQRFEITEAEERRINVL 141
+ I+ ++ E + SS FA F+G G+ ++P SS + F T +++ + L
Sbjct: 228 FHRLKIQVYKNETQGI---TSSGFASLTFEGTLGAPVIPRTSS-KYFNFTAEDQKMVEAL 283
Query: 142 RQWCVGFEFSSGSNDYLLSLKDISEHRYFDLVCKVFHVSYDDSKGLWMLFVWDGTDVPPL 201
R W S S L+ L D+ +YFDL C++ + D ++L VWDGT P
Sbjct: 284 RVWA-STHISPSST--LVKLCDVQPLQYFDLTCQLLGKAEVDGAS-FLLKVWDGTRTPFP 339
Query: 202 SIPGKLEDE--EHNPLPLH-IESSPLDLETLRNFFPVGTVLRVST 243
S ++D E + +H +++ +D+ N V L+V +
Sbjct: 340 SWRVLIQDLVLEGDLSHIHRLQNLTVDILVYDNHVQVAKSLKVGS 384
>UNIPROTKB|Q9NUX5 [details] [associations]
symbol:POT1 "Protection of telomeres protein 1"
species:9606 "Homo sapiens" [GO:0043047 "single-stranded telomeric
DNA binding" evidence=IDA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007004 "telomere maintenance via telomerase"
evidence=IDA] [GO:0000781 "chromosome, telomeric region"
evidence=IDA] [GO:0000723 "telomere maintenance" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0032203 "telomere
formation via telomerase" evidence=IDA] [GO:0051973 "positive
regulation of telomerase activity" evidence=IDA] [GO:0017151
"DEAD/H-box RNA helicase binding" evidence=IPI] [GO:0032508 "DNA
duplex unwinding" evidence=IDA] [GO:0051096 "positive regulation of
helicase activity" evidence=IDA] [GO:0032211 "negative regulation
of telomere maintenance via telomerase" evidence=IMP] [GO:0000783
"nuclear telomere cap complex" evidence=IDA] [GO:0032212 "positive
regulation of telomere maintenance via telomerase" evidence=IMP]
[GO:0010521 "telomerase inhibitor activity" evidence=IDA]
[GO:0051974 "negative regulation of telomerase activity"
evidence=IDA] [GO:0060383 "positive regulation of DNA strand
elongation" evidence=IDA] [GO:0016233 "telomere capping"
evidence=IGI;IMP] InterPro:IPR011564 Pfam:PF02765 SMART:SM00976
EMBL:AK001935 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0005654 Reactome:REACT_111183
GO:GO:0000783 GO:GO:0032211 GO:GO:0051973 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH471070 GO:GO:0016233
GO:GO:0007004 GO:GO:0043047 GO:GO:0010521 GO:GO:0032508
GO:GO:0032203 EMBL:AC004925 GO:GO:0032212 GO:GO:0051096
eggNOG:NOG284004 KO:K11109 CTD:25913 HOGENOM:HOG000015271
HOVERGEN:HBG053641 OrthoDB:EOG44F695 EMBL:AY823520 EMBL:AK001230
EMBL:AK022580 EMBL:AK026234 EMBL:AC096665 EMBL:AC110791
EMBL:BC002923 EMBL:AL050120 IPI:IPI00438212 IPI:IPI00438213
PIR:T08766 RefSeq:NP_001036059.1 RefSeq:NP_056265.2
UniGene:Hs.31968 PDB:1XJV PDB:3KJO PDB:3KJP PDBsum:1XJV PDBsum:3KJO
PDBsum:3KJP ProteinModelPortal:Q9NUX5 SMR:Q9NUX5 DIP:DIP-29610N
IntAct:Q9NUX5 MINT:MINT-1466135 STRING:Q9NUX5 PhosphoSite:Q9NUX5
DMDM:50401179 PaxDb:Q9NUX5 PRIDE:Q9NUX5 DNASU:25913
Ensembl:ENST00000357628 GeneID:25913 KEGG:hsa:25913 UCSC:uc003vlm.3
GeneCards:GC07M124462 HGNC:HGNC:17284 MIM:606478 neXtProt:NX_Q9NUX5
PharmGKB:PA134934904 InParanoid:Q9NUX5 OMA:TSWIPSS PhylomeDB:Q9NUX5
BindingDB:Q9NUX5 ChEMBL:CHEMBL5908 EvolutionaryTrace:Q9NUX5
GenomeRNAi:25913 NextBio:47408 ArrayExpress:Q9NUX5 Bgee:Q9NUX5
CleanEx:HS_POT1 Genevestigator:Q9NUX5 GermOnline:ENSG00000128513
GO:GO:0060383 Uniprot:Q9NUX5
Length = 634
Score = 206 (77.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 66/225 (29%), Positives = 110/225 (48%)
Query: 24 VNLLGVVLEFSIPRKSQGTDYVCVLKIVDDSQQSPELLVNIFTSSIDQLPRVLSPRDLIL 83
VN+ GVV F P S+GTDY V+ IVD Q + +L +F+ + + LP + D++
Sbjct: 23 VNVYGVVKFFKPPYLSKGTDYCSVVTIVD--QTNVKLTCLLFSGNYEALPIIYKNGDIVR 80
Query: 84 LKNVMIKKHQAELSAVFYKDSSSFA--LFDGNSGSNLLPYQSSPQRFEITEAEERRINVL 141
+ I+ ++ E + SS FA F+G G+ ++P SS + F T + + + L
Sbjct: 81 FHRLKIQVYKKETQGI---TSSGFASLTFEGTLGAPIIPRTSS-KYFNFTTEDHKMVEAL 136
Query: 142 RQWCVGFEFSSGSNDYLLSLKDISEHRYFDLVCKVFHVSYDDSKGLWMLFVWDGTDVPPL 201
R W S + LL L D+ +YFDL C++ + D ++L VWDGT P
Sbjct: 137 RVWASTHMSPSWT---LLKLCDVQPMQYFDLTCQLLGKAEVDGAS-FLLKVWDGTRTPFP 192
Query: 202 SIPGKLEDE--EHNPLPLH-IESSPLDLETLRNFFPVGTVLRVST 243
S ++D E + +H +++ +D+ N V L+V +
Sbjct: 193 SWRVLIQDLVLEGDLSHIHRLQNLTIDILVYDNHVHVARSLKVGS 237
>UNIPROTKB|Q95K48 [details] [associations]
symbol:POT1 "Protection of telomeres protein 1"
species:9541 "Macaca fascicularis" [GO:0000781 "chromosome,
telomeric region" evidence=ISS] [GO:0007004 "telomere maintenance
via telomerase" evidence=ISS] [GO:0043047 "single-stranded
telomeric DNA binding" evidence=ISS] InterPro:IPR011564
Pfam:PF02765 SMART:SM00976 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0000784 GO:GO:0000781 GO:GO:0007004
GO:GO:0043047 HOVERGEN:HBG053641 EMBL:AB066545
ProteinModelPortal:Q95K48 SMR:Q95K48 Uniprot:Q95K48
Length = 634
Score = 206 (77.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 66/225 (29%), Positives = 110/225 (48%)
Query: 24 VNLLGVVLEFSIPRKSQGTDYVCVLKIVDDSQQSPELLVNIFTSSIDQLPRVLSPRDLIL 83
VN+ GVV F P S+GTDY V+ IVD Q + +L +F+ + + LP + D++
Sbjct: 23 VNVYGVVKFFKPPYLSKGTDYCSVVTIVD--QTNVKLTCLLFSGNYEALPIIYKNGDIVR 80
Query: 84 LKNVMIKKHQAELSAVFYKDSSSFA--LFDGNSGSNLLPYQSSPQRFEITEAEERRINVL 141
+ I+ ++ E + SS FA F+G G+ ++P SS + F T + + + L
Sbjct: 81 FHRLKIQVYKKETQGI---TSSGFASLTFEGTLGAPIIPRTSS-KYFNFTTEDHKMVETL 136
Query: 142 RQWCVGFEFSSGSNDYLLSLKDISEHRYFDLVCKVFHVSYDDSKGLWMLFVWDGTDVPPL 201
R W S + LL L D+ +YFDL C++ + D ++L VWDGT P
Sbjct: 137 RVWASTHMSPSWT---LLKLCDVQPMQYFDLTCQLLGKAEVDGAS-FLLKVWDGTRTPFP 192
Query: 202 SIPGKLEDE--EHNPLPLH-IESSPLDLETLRNFFPVGTVLRVST 243
S ++D E + +H +++ +D+ N V L+V +
Sbjct: 193 SWRVLIQDLVLEGDLSHIHRLQNLTIDILVYDNHVHVARSLKVGS 237
>ZFIN|ZDB-GENE-110324-1 [details] [associations]
symbol:pot1 "protection of telomeres 1 homolog"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000723 "telomere maintenance" evidence=IEA] [GO:0000784
"nuclear chromosome, telomeric region" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR011564 Pfam:PF02765
SMART:SM00976 ZFIN:ZDB-GENE-110324-1 GO:GO:0003677
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000784
GO:GO:0000723 KO:K11109 CTD:25913 EMBL:HQ652076 IPI:IPI00934741
RefSeq:NP_001232889.1 UniGene:Dr.161100 GeneID:566847
KEGG:dre:566847 NextBio:20888405 Uniprot:F1D6H6
Length = 773
Score = 200 (75.5 bits), Expect = 8.4e-13, P = 8.4e-13
Identities = 61/195 (31%), Positives = 93/195 (47%)
Query: 21 KHKVNLLGVVLEFSIPRKSQGTDYVCVLKIVDDSQQSPELLVNIFTSSIDQLPRVLSPRD 80
K VN+ GVV F P S+G+DY LKI D Q +++ IF ++ P + D
Sbjct: 162 KTLVNVYGVVTFFKQPFPSKGSDYCTTLKITD--QSDVKVICTIFCKKLEDHPLIFRVGD 219
Query: 81 LILLKNVMIKKHQAELSAVFYKDSSSFALFDGNSGSNLLPYQSSPQRFEITEAEERRINV 140
+I L + + ++ + S+ F+G S ++P SS + F EA++RR+
Sbjct: 220 IIRLHRFKAEAFRDSITLINTFGWSTVT-FNGIIDSPIVPRTSS-KSFFYGEADKRRVQE 277
Query: 141 LRQWCVGFEFSSGSNDYLLSLKDISEHRYFDLVCKVFHVSYDDSKGLWMLFVWDGT--DV 198
LRQW S N SL + H YFD C++ + S G +L VWDGT +
Sbjct: 278 LRQWAANQSLCSDLNT---SLSSVQPHMYFDFTCQLLAKAVMHS-GCILLKVWDGTRCQL 333
Query: 199 PPLSI---PGKLEDE 210
P L + P +L+ E
Sbjct: 334 PLLQVAVPPDELKGE 348
>RGD|1582873 [details] [associations]
symbol:Pot1b "protection of telomeres 1B" species:10116 "Rattus
norvegicus" [GO:0000783 "nuclear telomere cap complex"
evidence=ISO] [GO:0000784 "nuclear chromosome, telomeric region"
evidence=ISO] [GO:0001558 "regulation of cell growth" evidence=ISO]
[GO:0007569 "cell aging" evidence=ISO] [GO:0016233 "telomere
capping" evidence=ISO] [GO:0031848 "protection from non-homologous
end joining at telomere" evidence=ISO] [GO:0043047 "single-stranded
telomeric DNA binding" evidence=ISO] [GO:0043247 "telomere
maintenance in response to DNA damage" evidence=ISO] [GO:0048239
"negative regulation of DNA recombination at telomere"
evidence=ISO] [GO:0051276 "chromosome organization" evidence=ISO]
REFSEQ:XM_001073777 Ncbi:XP_001073777
Length = 636
Score = 187 (70.9 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 51/173 (29%), Positives = 87/173 (50%)
Query: 24 VNLLGVVLEFSIPRKSQGTDYVCVLKIVDDSQQSPELLVNIFTSSIDQLPRVLSPRDLIL 83
V++ GVV F P S+GTDY V+ IVD Q +L +F+ + + LP + D++
Sbjct: 23 VSVCGVVKFFKPPYLSKGTDYCSVVTIVD--QTHVKLTCMLFSRNCETLPIIYKVGDIVC 80
Query: 84 LKNVMIKKHQAELSAVFYKDSSSFALFDGNSGSNLLPYQSSPQRFEITEAEERRINVLRQ 143
+ + I+ ++ EL + + +S FDG G+ ++ S + F T + + LR
Sbjct: 81 FRGLKIQAYKNELQGISTRGFASLT-FDGTLGAPVVSRTLS-KSFNFTAQDYNMVETLRT 138
Query: 144 WCVGFEFSSGSNDYLLSLKDISEHRYFDLVCKVFHVSYDDSKGLWMLFVWDGT 196
W S+ SN L+ L + +Y+DL C++ + D ++L VWDGT
Sbjct: 139 WA-STHISASSN--LVQLSNAEPMQYYDLTCQLLGKAEVDGVS-FLLKVWDGT 187
>MGI|MGI:2141503 [details] [associations]
symbol:Pot1a "protection of telomeres 1A" species:10090 "Mus
musculus" [GO:0000723 "telomere maintenance" evidence=IEA]
[GO:0000781 "chromosome, telomeric region" evidence=ISO]
[GO:0000783 "nuclear telomere cap complex" evidence=ISO;IDA]
[GO:0000784 "nuclear chromosome, telomeric region" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0007004 "telomere
maintenance via telomerase" evidence=ISO] [GO:0010521 "telomerase
inhibitor activity" evidence=ISO] [GO:0016233 "telomere capping"
evidence=ISO] [GO:0017151 "DEAD/H-box RNA helicase binding"
evidence=ISO] [GO:0032203 "telomere formation via telomerase"
evidence=ISO] [GO:0032211 "negative regulation of telomere
maintenance via telomerase" evidence=ISO] [GO:0032212 "positive
regulation of telomere maintenance via telomerase" evidence=ISO]
[GO:0032508 "DNA duplex unwinding" evidence=ISO] [GO:0042162
"telomeric DNA binding" evidence=ISO] [GO:0043047 "single-stranded
telomeric DNA binding" evidence=ISO;IDA] [GO:0051096 "positive
regulation of helicase activity" evidence=ISO] [GO:0051276
"chromosome organization" evidence=IGI] [GO:0051973 "positive
regulation of telomerase activity" evidence=ISO] [GO:0051974
"negative regulation of telomerase activity" evidence=ISO]
[GO:0060383 "positive regulation of DNA strand elongation"
evidence=ISO] InterPro:IPR011564 Pfam:PF02765 SMART:SM00976
MGI:MGI:2141503 GO:GO:0005654 GO:GO:0000783 Reactome:REACT_118161
Reactome:REACT_120463 Reactome:REACT_75800 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0007004 GO:GO:0043047
eggNOG:NOG284004 KO:K11109 HOGENOM:HOG000015271 HOVERGEN:HBG053641
OrthoDB:EOG44F695 OMA:TSWIPSS EMBL:AK036052 EMBL:AK040864
EMBL:AK085041 EMBL:BC016121 IPI:IPI00127971 IPI:IPI00454077
RefSeq:NP_598692.1 UniGene:Mm.274589 UniGene:Mm.397208
ProteinModelPortal:Q91WC1 SMR:Q91WC1 DIP:DIP-29608N
MINT:MINT-3379580 STRING:Q91WC1 PhosphoSite:Q91WC1 PRIDE:Q91WC1
Ensembl:ENSMUST00000115329 Ensembl:ENSMUST00000115330
Ensembl:ENSMUST00000166445 GeneID:101185 KEGG:mmu:101185
UCSC:uc009bce.1 UCSC:uc009bcf.1 CTD:101185
GeneTree:ENSGT00390000018285 NextBio:354800 Bgee:Q91WC1
CleanEx:MM_POT1A Genevestigator:Q91WC1
GermOnline:ENSMUSG00000029676 Uniprot:Q91WC1
Length = 640
Score = 186 (70.5 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 54/174 (31%), Positives = 88/174 (50%)
Query: 25 NLLGVVLEFSIPRKSQGTDYVCVLKIVDDSQQSPELLVNIFTSSIDQLPRVLSPRDLILL 84
N+ GVV F P S+GTDY V+ IVD Q + +L +F+ + + LP + D++
Sbjct: 24 NVYGVVKFFKPPYVSKGTDYCSVVTIVD--QTNVKLTCMLFSGNYEALPIIYKVGDIVRF 81
Query: 85 KNVMIKKHQAELSAVFYKDSSSFA--LFDGNSGSNLLPYQSSPQRFEITEAEERRINVLR 142
+ I+ ++ EL + + S FA F+G G + SS + F T +++ + LR
Sbjct: 82 HRLKIQVYKNELQGI---NCSGFASLTFEGTVGMPVTARTSS-KVFSFTPQDQKMVEALR 137
Query: 143 QWCVGFEFSSGSNDYLLSLKDISEHRYFDLVCKVFHVSYDDSKGLWMLFVWDGT 196
W S+ S L+ L D +Y+DL C++ + DS ++L VWDGT
Sbjct: 138 VWA-SKHISASST--LVQLCDAQPMQYYDLTCQLLGKAQVDSTA-FLLKVWDGT 187
>RGD|1562696 [details] [associations]
symbol:Pot1 "protection of telomeres 1" species:10116 "Rattus
norvegicus" [GO:0000723 "telomere maintenance" evidence=IEA]
[GO:0000781 "chromosome, telomeric region" evidence=ISO]
[GO:0000783 "nuclear telomere cap complex" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007004 "telomere
maintenance via telomerase" evidence=ISO] [GO:0010521 "telomerase
inhibitor activity" evidence=ISO] [GO:0016233 "telomere capping"
evidence=ISO] [GO:0017151 "DEAD/H-box RNA helicase binding"
evidence=ISO] [GO:0032203 "telomere formation via telomerase"
evidence=ISO] [GO:0032211 "negative regulation of telomere
maintenance via telomerase" evidence=ISO] [GO:0032212 "positive
regulation of telomere maintenance via telomerase" evidence=ISO]
[GO:0032508 "DNA duplex unwinding" evidence=ISO] [GO:0043047
"single-stranded telomeric DNA binding" evidence=ISO] [GO:0051096
"positive regulation of helicase activity" evidence=ISO]
[GO:0051276 "chromosome organization" evidence=ISO] [GO:0051973
"positive regulation of telomerase activity" evidence=ISO]
[GO:0051974 "negative regulation of telomerase activity"
evidence=ISO] [GO:0060383 "positive regulation of DNA strand
elongation" evidence=ISO] InterPro:IPR011564 Pfam:PF02765
SMART:SM00976 RGD:1562696 GO:GO:0000783 GO:GO:0032211 GO:GO:0051973
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0016233
GO:GO:0007004 GO:GO:0043047 GO:GO:0010521 GO:GO:0032508
GO:GO:0032203 GO:GO:0032212 GO:GO:0051096 eggNOG:NOG284004
KO:K11109 CTD:25913 HOGENOM:HOG000015271 HOVERGEN:HBG053641
OrthoDB:EOG44F695 GO:GO:0060383 GeneTree:ENSGT00390000018285
EMBL:BC085834 IPI:IPI00371535 RefSeq:NP_001019493.1
UniGene:Rn.138054 SMR:Q5U2W8 STRING:Q5U2W8
Ensembl:ENSRNOT00000060459 GeneID:500054 KEGG:rno:500054
UCSC:RGD:1562696 NextBio:704930 Genevestigator:Q5U2W8
Uniprot:Q5U2W8
Length = 573
Score = 184 (69.8 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 53/174 (30%), Positives = 89/174 (51%)
Query: 25 NLLGVVLEFSIPRKSQGTDYVCVLKIVDDSQQSPELLVNIFTSSIDQLPRVLSPRDLILL 84
N+ GVV F P S+GTDY V+ IVD + + +L +F+ + + LP + D++
Sbjct: 24 NVYGVVKFFKPPYLSKGTDYCSVVTIVDPT--NVKLTCMLFSGNYEALPIIYKVGDIVRF 81
Query: 85 KNVMIKKHQAELSAVFYKDSSSFA--LFDGNSGSNLLPYQSSPQRFEITEAEERRINVLR 142
+ I+ ++ EL + +SS FA F+G G+ + SS + F T +++ + LR
Sbjct: 82 HRLKIQVYKNELQGI---NSSGFASLTFEGTLGTPVTARTSS-KVFSFTSQDQKMVEALR 137
Query: 143 QWCVGFEFSSGSNDYLLSLKDISEHRYFDLVCKVFHVSYDDSKGLWMLFVWDGT 196
W +S S L+ L D +Y+DL C++ + D ++L VWDGT
Sbjct: 138 VWASKHIAASSS---LVQLCDAQPLQYYDLTCQLLGKAEVDGTA-FLLKVWDGT 187
>UNIPROTKB|F1NFN1 [details] [associations]
symbol:POT1 "Protection of telomeres protein 1"
species:9031 "Gallus gallus" [GO:0000783 "nuclear telomere cap
complex" evidence=IEA] [GO:0007004 "telomere maintenance via
telomerase" evidence=IEA] [GO:0010521 "telomerase inhibitor
activity" evidence=IEA] [GO:0016233 "telomere capping"
evidence=IEA] [GO:0017151 "DEAD/H-box RNA helicase binding"
evidence=IEA] [GO:0032203 "telomere formation via telomerase"
evidence=IEA] [GO:0032211 "negative regulation of telomere
maintenance via telomerase" evidence=IEA] [GO:0032212 "positive
regulation of telomere maintenance via telomerase" evidence=IEA]
[GO:0032508 "DNA duplex unwinding" evidence=IEA] [GO:0043047
"single-stranded telomeric DNA binding" evidence=IEA] [GO:0051096
"positive regulation of helicase activity" evidence=IEA]
[GO:0051973 "positive regulation of telomerase activity"
evidence=IEA] [GO:0060383 "positive regulation of DNA strand
elongation" evidence=IEA] InterPro:IPR011564 Pfam:PF02765
GO:GO:0000783 GO:GO:0032211 GO:GO:0051973 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0016233 GO:GO:0007004
GO:GO:0043047 GO:GO:0010521 GO:GO:0032508 GO:GO:0032203
GO:GO:0032212 GO:GO:0051096 GO:GO:0060383
GeneTree:ENSGT00390000018285 EMBL:AADN02010261 EMBL:AADN02010262
EMBL:AADN02010263 EMBL:AADN02010264 EMBL:AADN02010265
IPI:IPI00818752 Ensembl:ENSGALT00000030716 ArrayExpress:F1NFN1
Uniprot:F1NFN1
Length = 549
Score = 119 (46.9 bits), Expect = 0.00048, P = 0.00048
Identities = 39/160 (24%), Positives = 75/160 (46%)
Query: 89 IKKHQAELSAVFYKDSSSFA--LFDGNSGSNLLPYQSSPQRFEITEAEERRINVLRQWCV 146
I+++ ++ + S+ FA FDG G+ ++P SS + + + E++ + LR W
Sbjct: 1 IREYNGQMQGI---TSAGFASLTFDGTVGAPVVPRASS-KVYTFVDEEQKTVEELRIWAA 56
Query: 147 GFEFSSGSNDYLLSLKDISEHRYFDLVCKVFHVSYDDSKGLWMLFVWDGTDVP-PL-SIP 204
SG L D+ +FDL C++ + D ++L VWDGT P P +P
Sbjct: 57 SNLSVSGPE---AKLSDVKPMMFFDLTCQLVGKAKVDGSS-FLLKVWDGTKCPYPTWKVP 112
Query: 205 GKLEDEEHNPLPLH-IESSPLDLETLRNFFPVGTVLRVST 243
+ ++ E + + LH + + +D+ N + L+ +
Sbjct: 113 VEAKELEGDRVLLHHLRNLTVDVLVYDNHVQLAKSLKTGS 152
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 401 391 0.00094 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 618 (66 KB)
Total size of DFA: 276 KB (2144 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.97u 0.09s 31.06t Elapsed: 00:00:02
Total cpu time: 30.97u 0.09s 31.06t Elapsed: 00:00:02
Start: Mon May 20 21:23:48 2013 End: Mon May 20 21:23:50 2013