Query 015764
Match_columns 401
No_of_seqs 126 out of 166
Neff 3.6
Searched_HMMs 29240
Date Mon Mar 25 18:16:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015764.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015764hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1at0_A 17-hedgehog; developmen 97.5 0.00042 1.4E-08 60.0 8.9 95 281-384 5-103 (145)
2 2in0_A Endonuclease PI-MTUI; h 96.5 0.0086 2.9E-07 50.4 8.1 83 285-382 10-96 (139)
3 1mi8_A DNAB intein; all beta-s 96.5 0.014 4.7E-07 50.1 9.5 86 282-382 8-98 (158)
4 1am2_A MXE GYRA intein; protei 95.8 0.038 1.3E-06 49.9 9.0 87 282-382 7-107 (199)
5 2imz_A Endonuclease PI-MTUI; N 94.2 0.12 4E-06 44.5 7.3 86 282-382 6-96 (168)
6 4e2u_A PHO RADA intein; HINT-f 93.9 0.25 8.6E-06 43.3 8.9 91 282-384 10-125 (168)
7 3qz6_A HPCH/HPAI aldolase; str 91.9 0.27 9.3E-06 46.2 6.6 92 108-203 14-110 (261)
8 2lcj_A PAB POLC intein; hydrol 91.6 0.84 2.9E-05 40.3 9.1 74 299-383 45-121 (185)
9 3qja_A IGPS, indole-3-glycerol 90.8 1.6 5.6E-05 41.3 10.7 117 59-195 124-253 (272)
10 2v5j_A 2,4-dihydroxyhept-2-ENE 89.3 1.9 6.5E-05 41.1 9.8 93 107-203 36-133 (287)
11 3luf_A Two-component system re 88.3 1.6 5.4E-05 39.4 8.3 143 53-203 77-243 (259)
12 1dxe_A 2-dehydro-3-deoxy-galac 88.0 2.6 8.9E-05 39.0 9.6 89 110-204 20-114 (256)
13 2vws_A YFAU, 2-keto-3-deoxy su 87.3 2 7E-05 40.1 8.6 92 108-203 16-112 (267)
14 3q58_A N-acetylmannosamine-6-p 86.5 3.1 0.00011 38.2 9.2 107 60-190 91-211 (229)
15 2v82_A 2-dehydro-3-deoxy-6-pho 84.9 1.7 5.8E-05 38.1 6.3 107 60-191 22-130 (212)
16 3qz6_A HPCH/HPAI aldolase; str 83.7 0.56 1.9E-05 44.0 2.9 140 51-194 17-179 (261)
17 1dxe_A 2-dehydro-3-deoxy-galac 83.4 5.9 0.0002 36.6 9.6 139 52-194 22-181 (256)
18 3bo9_A Putative nitroalkan dio 83.3 4 0.00014 39.0 8.7 112 57-190 37-152 (326)
19 3o63_A Probable thiamine-phosp 82.9 9.3 0.00032 35.5 10.7 90 107-203 134-239 (243)
20 1izc_A Macrophomate synthase i 80.8 3.1 0.00011 40.7 7.0 91 110-204 43-140 (339)
21 3paj_A Nicotinate-nucleotide p 80.3 2.3 7.9E-05 41.8 5.9 41 160-203 232-272 (320)
22 3igs_A N-acetylmannosamine-6-p 79.3 7.2 0.00025 35.8 8.5 107 60-190 91-211 (232)
23 2k1g_A Lipoprotein SPR; soluti 79.1 0.85 2.9E-05 39.4 2.1 31 365-395 60-90 (135)
24 3qtg_A Pyruvate kinase, PK; TI 78.7 1.9 6.6E-05 44.4 4.9 135 58-205 182-344 (461)
25 3vnd_A TSA, tryptophan synthas 78.0 1.9 6.5E-05 40.9 4.3 114 60-191 113-237 (267)
26 1dfa_A PI-SCEI endonuclease; i 77.8 0.64 2.2E-05 46.6 1.1 90 280-381 4-104 (454)
27 1wa3_A 2-keto-3-deoxy-6-phosph 77.6 4.4 0.00015 35.2 6.3 121 60-203 25-145 (205)
28 1e0t_A Pyruvate kinase, PK; ph 77.3 3.7 0.00013 42.2 6.6 37 157-194 212-248 (470)
29 2w6r_A Imidazole glycerol phos 77.0 12 0.00041 33.7 9.2 114 59-190 32-177 (266)
30 1umk_A B5R, NADH-cytochrome B5 76.6 5.3 0.00018 35.9 6.7 111 214-332 15-154 (275)
31 2qzj_A Two-component response 76.4 13 0.00045 29.0 8.3 81 116-199 33-114 (136)
32 3hdg_A Uncharacterized protein 76.3 9.6 0.00033 29.4 7.3 83 116-201 36-120 (137)
33 1sgj_A Citrate lyase, beta sub 76.0 8.4 0.00029 36.0 8.1 91 110-204 9-116 (284)
34 3igs_A N-acetylmannosamine-6-p 76.0 27 0.00093 31.9 11.4 113 60-188 39-155 (232)
35 4fxs_A Inosine-5'-monophosphat 75.9 5.7 0.00019 40.5 7.4 118 56-191 229-365 (496)
36 4avf_A Inosine-5'-monophosphat 75.4 10 0.00034 38.5 9.1 115 56-191 227-363 (490)
37 4e7p_A Response regulator; DNA 75.4 17 0.00058 28.7 8.7 81 116-199 51-133 (150)
38 3q58_A N-acetylmannosamine-6-p 75.2 21 0.00073 32.6 10.5 113 60-188 39-155 (229)
39 3jte_A Response regulator rece 75.0 15 0.00052 28.4 8.2 82 116-199 32-116 (143)
40 1qop_A Tryptophan synthase alp 75.0 2.9 0.0001 38.8 4.7 114 60-191 112-236 (268)
41 3tqv_A Nicotinate-nucleotide p 74.9 4.5 0.00015 39.2 6.1 42 159-203 198-239 (287)
42 3hqn_D Pyruvate kinase, PK; TI 74.8 1.7 5.8E-05 45.2 3.3 134 58-204 193-352 (499)
43 2vws_A YFAU, 2-keto-3-deoxy su 74.5 11 0.00037 35.2 8.5 36 159-194 145-181 (267)
44 3gr4_A Pyruvate kinase isozyme 74.5 2.8 9.4E-05 44.1 4.8 134 58-204 243-402 (550)
45 2v5j_A 2,4-dihydroxyhept-2-ENE 74.4 8.8 0.0003 36.5 7.9 36 159-194 166-202 (287)
46 3l0g_A Nicotinate-nucleotide p 74.1 4.5 0.00015 39.6 5.9 43 159-204 207-249 (300)
47 1k68_A Phytochrome response re 73.7 12 0.00041 28.4 7.2 82 116-199 33-124 (140)
48 3lab_A Putative KDPG (2-keto-3 73.5 9 0.00031 35.7 7.5 122 58-203 26-157 (217)
49 2gjl_A Hypothetical protein PA 73.1 8.4 0.00029 36.4 7.4 111 58-190 27-146 (328)
50 3m7n_A Putative uncharacterize 73.1 8.2 0.00028 34.2 6.9 98 284-385 3-124 (179)
51 3usb_A Inosine-5'-monophosphat 73.0 4.2 0.00014 41.6 5.7 115 56-191 254-390 (511)
52 3nav_A Tryptophan synthase alp 72.7 3.4 0.00012 39.3 4.6 114 60-191 115-239 (271)
53 3tsm_A IGPS, indole-3-glycerol 72.4 23 0.00079 33.7 10.3 122 59-203 131-266 (272)
54 1wbh_A KHG/KDPG aldolase; lyas 72.1 12 0.00041 33.9 7.9 109 60-192 31-139 (214)
55 2ekc_A AQ_1548, tryptophan syn 72.0 3.2 0.00011 38.5 4.2 113 60-190 112-235 (262)
56 1vhc_A Putative KHG/KDPG aldol 71.4 11 0.00039 34.5 7.7 110 59-192 31-140 (224)
57 4drs_A Pyruvate kinase; glycol 71.3 5.8 0.0002 41.5 6.3 138 61-204 220-383 (526)
58 3ffs_A Inosine-5-monophosphate 71.1 12 0.0004 37.6 8.2 109 60-191 146-277 (400)
59 2qvg_A Two component response 71.0 18 0.00062 27.9 7.8 66 132-199 59-128 (143)
60 1o4u_A Type II quinolic acid p 70.4 7.3 0.00025 37.5 6.3 42 160-204 194-235 (285)
61 2e28_A Pyruvate kinase, PK; al 70.2 3.7 0.00013 43.3 4.6 134 58-204 174-334 (587)
62 1xi3_A Thiamine phosphate pyro 70.0 17 0.00056 31.3 8.0 112 61-203 77-210 (215)
63 3c2e_A Nicotinate-nucleotide p 69.8 3 0.0001 40.0 3.5 69 160-234 200-276 (294)
64 3q9s_A DNA-binding response re 69.8 14 0.00048 32.7 7.7 81 116-199 66-147 (249)
65 3gnn_A Nicotinate-nucleotide p 69.7 4.7 0.00016 39.3 4.9 42 159-203 209-250 (298)
66 4e38_A Keto-hydroxyglutarate-a 69.4 12 0.0004 35.1 7.3 109 58-193 47-158 (232)
67 2b7n_A Probable nicotinate-nuc 68.8 11 0.00038 35.5 7.2 42 160-204 183-224 (273)
68 1qo2_A Molecule: N-((5-phospho 68.4 19 0.00066 32.0 8.4 134 52-190 75-224 (241)
69 3f6c_A Positive transcription 68.0 16 0.00053 27.9 6.7 81 116-199 31-113 (134)
70 1qap_A Quinolinic acid phospho 67.9 7 0.00024 37.7 5.7 40 161-203 210-249 (296)
71 3jqq_A Ferredoxin NADP reducta 67.8 6.9 0.00024 36.7 5.5 59 268-332 98-178 (316)
72 2tps_A Protein (thiamin phosph 67.6 18 0.00061 31.6 7.8 114 62-203 86-220 (227)
73 3gg8_A Pyruvate kinase; malari 67.5 2.9 9.8E-05 43.6 3.0 134 58-204 208-368 (511)
74 3mm4_A Histidine kinase homolo 66.8 16 0.00055 31.3 7.2 71 132-204 119-195 (206)
75 1ujp_A Tryptophan synthase alp 66.7 6.3 0.00022 37.2 5.0 114 60-191 109-231 (271)
76 4fo4_A Inosine 5'-monophosphat 66.4 17 0.00058 35.9 8.2 115 58-191 108-242 (366)
77 3khd_A Pyruvate kinase; malari 66.4 3.2 0.00011 43.4 3.2 134 58-204 217-377 (520)
78 1p2f_A Response regulator; DRR 66.4 24 0.00082 29.8 8.2 80 116-200 30-111 (220)
79 1w8s_A FBP aldolase, fructose- 66.3 13 0.00045 34.6 7.0 82 119-204 157-252 (263)
80 3kcn_A Adenylate cyclase homol 66.3 29 0.00098 27.4 8.2 82 116-199 32-116 (151)
81 1vzw_A Phosphoribosyl isomeras 66.1 10 0.00035 33.8 6.0 113 57-192 32-169 (244)
82 2gjl_A Hypothetical protein PA 65.5 25 0.00085 33.1 8.9 107 60-190 86-202 (328)
83 1a3w_A Pyruvate kinase; allost 65.5 6.7 0.00023 40.6 5.3 38 274-312 392-429 (500)
84 3gt7_A Sensor protein; structu 65.2 29 0.00097 27.7 8.0 85 116-203 36-125 (154)
85 3h1g_A Chemotaxis protein CHEY 64.9 23 0.00078 27.2 7.1 40 159-199 81-120 (129)
86 3o63_A Probable thiamine-phosp 64.8 15 0.00053 34.0 7.2 103 60-190 46-163 (243)
87 3t05_A Pyruvate kinase, PK; te 64.7 3.4 0.00012 43.9 3.0 134 58-204 194-353 (606)
88 4eh1_A Flavohemoprotein; struc 63.8 11 0.00037 33.0 5.7 101 216-332 4-122 (243)
89 2qr3_A Two-component system re 63.3 35 0.0012 26.0 8.0 82 116-199 32-119 (140)
90 3llv_A Exopolyphosphatase-rela 63.0 29 0.00099 27.7 7.7 116 50-191 6-125 (141)
91 1kgs_A DRRD, DNA binding respo 63.0 26 0.00088 29.5 7.7 81 116-199 31-113 (225)
92 1xi3_A Thiamine phosphate pyro 62.6 33 0.0011 29.4 8.5 103 59-190 28-136 (215)
93 1vzw_A Phosphoribosyl isomeras 62.4 24 0.00081 31.4 7.7 28 52-79 77-106 (244)
94 3hdv_A Response regulator; PSI 62.4 25 0.00087 26.9 7.0 81 117-199 37-120 (136)
95 1zgz_A Torcad operon transcrip 62.3 38 0.0013 25.2 7.8 79 117-198 32-111 (122)
96 3qja_A IGPS, indole-3-glycerol 62.1 17 0.00057 34.3 7.0 71 117-192 122-192 (272)
97 3cnb_A DNA-binding response re 62.1 40 0.0014 25.7 8.1 80 117-199 40-123 (143)
98 3fwz_A Inner membrane protein 61.9 34 0.0012 27.7 8.0 104 60-191 20-127 (140)
99 1yad_A Regulatory protein TENI 61.6 66 0.0022 28.2 10.4 51 132-190 88-138 (221)
100 2yw3_A 4-hydroxy-2-oxoglutarat 61.5 37 0.0013 30.4 8.8 108 59-192 27-134 (207)
101 2jbm_A Nicotinate-nucleotide p 61.4 13 0.00045 35.7 6.2 42 160-204 198-239 (299)
102 2w6r_A Imidazole glycerol phos 61.3 45 0.0015 29.9 9.4 69 132-203 169-246 (266)
103 2v82_A 2-dehydro-3-deoxy-6-pho 61.2 16 0.00056 31.8 6.3 105 59-190 69-177 (212)
104 3eqz_A Response regulator; str 61.1 50 0.0017 24.8 9.7 83 116-201 32-120 (135)
105 2y88_A Phosphoribosyl isomeras 61.0 29 0.00098 30.7 8.0 28 52-79 76-105 (244)
106 2jyx_A Lipoprotein SPR; soluti 60.8 3.8 0.00013 34.8 2.1 31 365-395 60-90 (136)
107 3kto_A Response regulator rece 60.6 30 0.001 26.8 7.2 40 159-199 80-119 (136)
108 3hv2_A Response regulator/HD d 60.5 47 0.0016 26.2 8.4 81 116-199 43-126 (153)
109 2zay_A Response regulator rece 60.4 47 0.0016 25.7 8.3 81 116-199 37-121 (147)
110 3h5i_A Response regulator/sens 60.3 4.7 0.00016 31.6 2.4 82 117-199 35-117 (140)
111 2jmz_A Hypothetical protein MJ 60.2 10 0.00036 33.3 4.9 66 301-383 57-131 (186)
112 1at0_A 17-hedgehog; developmen 60.0 18 0.00061 30.8 6.2 33 290-322 85-118 (145)
113 3ilh_A Two component response 59.8 56 0.0019 25.0 8.8 82 116-199 40-132 (146)
114 3eul_A Possible nitrate/nitrit 59.7 37 0.0013 26.7 7.6 66 132-199 61-128 (152)
115 3tha_A Tryptophan synthase alp 59.5 9.4 0.00032 36.1 4.7 116 59-191 105-229 (252)
116 1k66_A Phytochrome response re 59.5 37 0.0013 26.0 7.5 66 132-199 62-131 (149)
117 3khj_A Inosine-5-monophosphate 59.4 20 0.00068 35.1 7.2 112 60-191 107-238 (361)
118 1rd5_A Tryptophan synthase alp 59.3 7.2 0.00025 35.6 3.8 109 64-190 112-231 (262)
119 2wfw_A ARC; ATP-binding protei 59.1 11 0.00036 33.9 4.7 44 267-321 25-74 (153)
120 3bw2_A 2-nitropropane dioxygen 58.9 25 0.00086 33.8 7.7 107 60-190 112-238 (369)
121 1yxy_A Putative N-acetylmannos 58.8 49 0.0017 29.2 9.1 111 60-186 39-157 (234)
122 2rjn_A Response regulator rece 58.5 65 0.0022 25.3 9.7 81 116-199 36-119 (154)
123 3rqi_A Response regulator prot 58.4 22 0.00077 29.4 6.4 78 116-199 36-118 (184)
124 3nhm_A Response regulator; pro 58.3 25 0.00087 26.7 6.3 80 116-199 32-115 (133)
125 2pl1_A Transcriptional regulat 58.3 43 0.0015 24.8 7.5 81 116-199 29-111 (121)
126 2z6i_A Trans-2-enoyl-ACP reduc 58.2 24 0.00082 33.5 7.4 107 60-190 78-192 (332)
127 1gpp_A Endonuclease PI-SCEI; h 58.2 7.4 0.00025 37.1 3.7 32 282-315 16-47 (237)
128 2jba_A Phosphate regulon trans 57.3 36 0.0012 25.5 6.9 81 116-199 31-115 (127)
129 3t8y_A CHEB, chemotaxis respon 57.2 44 0.0015 27.0 7.9 74 117-192 57-132 (164)
130 3qvq_A Phosphodiesterase OLEI0 57.1 12 0.00042 34.0 4.9 31 48-78 208-239 (252)
131 3cfy_A Putative LUXO repressor 56.8 67 0.0023 24.9 8.7 66 132-199 48-115 (137)
132 3r0j_A Possible two component 56.8 40 0.0014 29.3 8.1 81 116-199 52-134 (250)
133 3kht_A Response regulator; PSI 56.7 52 0.0018 25.4 8.0 81 116-199 36-121 (144)
134 1nir_A Nitrite reductase; hemo 56.7 1.5E+02 0.0052 29.4 13.1 167 174-358 75-256 (543)
135 4fk8_A Ferredoxin--NADP reduct 56.6 17 0.0006 32.5 5.8 102 214-332 18-130 (271)
136 3no3_A Glycerophosphodiester p 56.3 13 0.00043 33.7 4.9 31 48-78 194-225 (238)
137 1thf_D HISF protein; thermophI 56.1 59 0.002 28.8 9.2 28 52-79 76-105 (253)
138 3cz5_A Two-component response 55.5 41 0.0014 26.4 7.3 81 116-199 36-118 (153)
139 1qpo_A Quinolinate acid phosph 55.3 14 0.00049 35.3 5.3 41 161-204 196-236 (284)
140 1tqj_A Ribulose-phosphate 3-ep 55.0 8.7 0.0003 34.9 3.6 123 60-202 75-220 (230)
141 4dad_A Putative pilus assembly 54.7 27 0.00093 27.1 6.0 67 131-199 66-134 (146)
142 1h1y_A D-ribulose-5-phosphate 54.6 16 0.00054 32.7 5.2 123 59-203 76-221 (228)
143 3mz2_A Glycerophosphoryl diest 54.4 17 0.00057 34.4 5.5 50 149-200 218-275 (292)
144 3cg0_A Response regulator rece 54.3 31 0.0011 26.3 6.2 67 132-199 54-121 (140)
145 1qkk_A DCTD, C4-dicarboxylate 54.2 63 0.0022 25.4 8.2 80 117-199 33-114 (155)
146 3ks6_A Glycerophosphoryl diest 54.1 14 0.00049 33.6 4.9 31 48-78 202-233 (250)
147 3grc_A Sensor protein, kinase; 54.0 22 0.00076 27.4 5.3 67 132-199 50-120 (140)
148 1geq_A Tryptophan synthase alp 54.0 13 0.00043 33.3 4.4 113 60-191 98-222 (248)
149 3cwo_X Beta/alpha-barrel prote 53.8 11 0.00038 31.9 3.8 21 58-78 63-83 (237)
150 1qo2_A Molecule: N-((5-phospho 53.3 56 0.0019 29.0 8.6 107 58-192 31-167 (241)
151 2z6i_A Trans-2-enoyl-ACP reduc 52.3 33 0.0011 32.5 7.2 110 59-190 25-138 (332)
152 1thf_D HISF protein; thermophI 52.2 43 0.0015 29.7 7.6 115 59-191 32-173 (253)
153 1mxs_A KDPG aldolase; 2-keto-3 52.0 33 0.0011 31.4 7.0 108 59-190 40-147 (225)
154 3lte_A Response regulator; str 52.0 57 0.002 24.6 7.4 79 117-199 36-118 (132)
155 2fli_A Ribulose-phosphate 3-ep 51.9 34 0.0012 29.7 6.8 18 61-78 75-92 (220)
156 3ovp_A Ribulose-phosphate 3-ep 51.9 35 0.0012 31.2 7.1 124 60-203 77-217 (228)
157 2aam_A Hypothetical protein TM 51.7 29 0.001 33.5 6.9 114 54-193 23-146 (309)
158 3tsm_A IGPS, indole-3-glycerol 51.7 49 0.0017 31.4 8.3 71 117-192 129-199 (272)
159 1izc_A Macrophomate synthase i 51.7 26 0.00088 34.3 6.5 37 159-195 177-214 (339)
160 3cu2_A Ribulose-5-phosphate 3- 51.3 35 0.0012 31.6 7.0 127 58-201 80-234 (237)
161 3inp_A D-ribulose-phosphate 3- 51.2 16 0.00056 34.2 4.8 126 60-203 99-243 (246)
162 2gkg_A Response regulator homo 50.9 26 0.0009 26.0 5.2 39 159-199 80-118 (127)
163 1eep_A Inosine 5'-monophosphat 50.8 74 0.0025 31.0 9.6 115 58-191 153-287 (404)
164 1vrd_A Inosine-5'-monophosphat 50.7 50 0.0017 32.9 8.6 114 58-190 237-370 (494)
165 1dbw_A Transcriptional regulat 50.7 75 0.0026 23.9 7.8 80 117-199 33-114 (126)
166 1xhf_A DYE resistance, aerobic 50.5 39 0.0013 25.2 6.1 81 116-199 32-113 (123)
167 3ks6_A Glycerophosphoryl diest 50.5 12 0.00041 34.0 3.8 60 133-201 182-242 (250)
168 3eod_A Protein HNR; response r 50.4 41 0.0014 25.5 6.3 41 159-200 79-120 (130)
169 3e0e_A Replication protein A; 50.3 40 0.0014 26.8 6.4 71 291-382 2-73 (97)
170 1sgj_A Citrate lyase, beta sub 50.1 1E+02 0.0035 28.6 10.1 135 50-194 7-157 (284)
171 1zfj_A Inosine monophosphate d 50.0 25 0.00087 34.8 6.3 119 58-191 233-367 (491)
172 4g1v_A Flavohemoglobin; three 49.4 26 0.0009 33.5 6.1 105 214-333 148-281 (399)
173 2qsj_A DNA-binding response re 49.2 32 0.0011 27.0 5.6 82 116-199 34-117 (154)
174 1xx1_A Smase I, sphingomyelina 48.8 18 0.0006 33.2 4.6 31 49-79 223-254 (285)
175 1zh2_A KDP operon transcriptio 48.5 17 0.0006 26.9 3.8 66 132-199 45-111 (121)
176 2cnd_A NADH-dependent nitrate 48.3 67 0.0023 28.5 8.2 111 214-332 11-144 (270)
177 1krh_A Benzoate 1,2-dioxygenas 47.8 41 0.0014 31.2 7.0 98 215-332 108-218 (338)
178 1fnb_A Ferredoxin-NADP+ reduct 47.7 48 0.0016 30.5 7.4 103 216-332 38-170 (314)
179 2tps_A Protein (thiamin phosph 47.6 51 0.0018 28.6 7.2 49 132-188 94-142 (227)
180 2y88_A Phosphoribosyl isomeras 47.5 23 0.0008 31.2 5.1 104 92-201 5-118 (244)
181 1x1o_A Nicotinate-nucleotide p 47.5 36 0.0012 32.6 6.7 41 160-203 197-237 (286)
182 3snk_A Response regulator CHEY 47.4 32 0.0011 26.4 5.3 40 159-199 87-126 (135)
183 1vd6_A Glycerophosphoryl diest 47.3 23 0.00078 31.5 5.0 36 48-85 184-220 (224)
184 3f6p_A Transcriptional regulat 46.8 18 0.00062 27.5 3.7 38 160-198 74-111 (120)
185 3bo9_A Putative nitroalkan dio 46.6 44 0.0015 31.8 7.1 108 59-190 91-206 (326)
186 2xz9_A Phosphoenolpyruvate-pro 46.5 53 0.0018 31.8 7.7 96 105-205 14-159 (324)
187 2hbw_A NLP/P60 protein; NLP/P6 46.4 10 0.00034 35.4 2.6 41 264-307 9-49 (235)
188 2iwa_A Glutamine cyclotransfer 46.4 1.4E+02 0.0047 27.9 10.4 127 212-359 48-181 (266)
189 1jbe_A Chemotaxis protein CHEY 46.0 91 0.0031 23.3 7.9 66 132-199 49-118 (128)
190 3ffs_A Inosine-5-monophosphate 45.9 30 0.001 34.7 6.0 55 132-189 156-212 (400)
191 3b2n_A Uncharacterized protein 45.9 94 0.0032 23.7 7.8 81 116-199 34-116 (133)
192 1i3c_A Response regulator RCP1 45.5 62 0.0021 25.4 6.8 66 132-199 61-130 (149)
193 1q7h_A Conserved hypothetical 45.5 14 0.00048 31.5 3.2 70 254-327 54-129 (153)
194 2qjg_A Putative aldolase MJ040 44.9 59 0.002 29.3 7.5 101 63-188 105-236 (273)
195 1fdr_A Flavodoxin reductase; f 44.8 27 0.00093 30.7 5.0 51 278-332 61-114 (248)
196 3l12_A Putative glycerophospho 44.2 20 0.0007 33.5 4.4 32 48-79 266-298 (313)
197 2qxy_A Response regulator; reg 44.1 53 0.0018 25.3 6.1 77 116-199 33-114 (142)
198 2otd_A Glycerophosphodiester p 43.9 23 0.00078 31.9 4.5 32 48-79 205-237 (247)
199 1a04_A Nitrate/nitrite respons 43.2 90 0.0031 26.1 7.9 81 116-199 36-118 (215)
200 3qvq_A Phosphodiesterase OLEI0 42.9 20 0.00067 32.6 3.9 51 142-198 194-245 (252)
201 3lua_A Response regulator rece 42.7 47 0.0016 25.5 5.6 84 116-200 34-121 (140)
202 1vd6_A Glycerophosphoryl diest 42.6 68 0.0023 28.4 7.4 59 144-203 78-142 (224)
203 3no3_A Glycerophosphodiester p 42.3 19 0.00066 32.5 3.7 46 149-199 186-232 (238)
204 1zcc_A Glycerophosphodiester p 42.3 23 0.00079 32.0 4.3 31 48-78 192-224 (248)
205 2nv1_A Pyridoxal biosynthesis 42.1 2.2E+02 0.0074 26.5 11.8 110 53-189 24-152 (305)
206 1ep3_B Dihydroorotate dehydrog 42.0 47 0.0016 29.8 6.2 99 217-332 7-118 (262)
207 1p6q_A CHEY2; chemotaxis, sign 41.9 54 0.0018 24.7 5.7 66 132-199 51-120 (129)
208 2g1u_A Hypothetical protein TM 41.8 79 0.0027 25.8 7.1 56 131-192 83-139 (155)
209 3heb_A Response regulator rece 41.7 65 0.0022 25.2 6.4 40 159-199 89-128 (152)
210 3hzh_A Chemotaxis response reg 41.5 46 0.0016 26.5 5.6 40 159-199 111-150 (157)
211 3gt2_A Putative uncharacterize 41.3 11 0.00039 32.0 1.9 30 365-395 82-111 (142)
212 1ka9_F Imidazole glycerol phos 40.8 70 0.0024 28.3 7.1 122 61-203 35-195 (252)
213 3f4w_A Putative hexulose 6 pho 40.7 87 0.003 26.9 7.6 71 132-203 77-157 (211)
214 3crn_A Response regulator rece 40.7 78 0.0027 24.2 6.6 81 116-199 32-114 (132)
215 3mbr_X Glutamine cyclotransfer 39.3 2.4E+02 0.0081 26.2 10.7 80 281-373 106-188 (243)
216 1tmy_A CHEY protein, TMY; chem 39.1 40 0.0014 25.0 4.6 66 132-199 47-114 (120)
217 3rlg_A Sphingomyelin phosphodi 39.0 30 0.001 34.0 4.7 30 50-79 241-271 (302)
218 2hc8_A PACS, cation-transporti 38.2 15 0.00052 30.2 2.1 30 349-383 11-40 (113)
219 1srr_A SPO0F, sporulation resp 38.0 90 0.0031 23.3 6.4 81 116-199 32-114 (124)
220 3r2g_A Inosine 5'-monophosphat 38.0 1.6E+02 0.0055 29.1 9.8 116 58-191 100-230 (361)
221 2pz0_A Glycerophosphoryl diest 38.0 21 0.0007 32.4 3.2 31 48-78 209-240 (252)
222 2a9o_A Response regulator; ess 37.7 32 0.0011 25.4 3.7 66 132-199 45-111 (120)
223 1jcn_A Inosine monophosphate d 37.6 79 0.0027 31.7 7.7 112 59-191 256-389 (514)
224 4hpe_A Putative cell WALL hydr 37.3 16 0.00053 35.2 2.4 31 365-395 241-275 (308)
225 2zbt_A Pyridoxal biosynthesis 36.5 2.5E+02 0.0087 25.7 12.1 112 53-189 24-152 (297)
226 4ggc_A P55CDC, cell division c 36.4 46 0.0016 28.3 5.0 10 266-275 7-16 (318)
227 3i42_A Response regulator rece 36.4 30 0.001 26.1 3.5 67 132-201 47-117 (127)
228 1dcf_A ETR1 protein; beta-alph 36.3 48 0.0016 25.4 4.7 38 161-199 85-122 (136)
229 1y0e_A Putative N-acetylmannos 36.2 66 0.0023 28.0 6.1 110 59-191 77-206 (223)
230 3n53_A Response regulator rece 36.2 52 0.0018 25.3 4.9 80 117-199 32-115 (140)
231 3d79_A PUA domain, putative un 36.0 21 0.00072 31.6 2.9 54 272-327 96-154 (179)
232 2r25_B Osmosensing histidine p 36.0 39 0.0013 26.1 4.2 41 159-200 81-121 (133)
233 2gwr_A DNA-binding response re 35.6 47 0.0016 28.6 5.0 68 132-201 49-117 (238)
234 1yio_A Response regulatory pro 35.4 58 0.002 27.0 5.4 81 116-199 33-115 (208)
235 3zv0_C H/ACA ribonucleoprotein 35.4 34 0.0012 31.6 4.2 54 273-328 78-135 (195)
236 1xx1_A Smase I, sphingomyelina 35.1 44 0.0015 30.5 4.9 46 149-199 212-260 (285)
237 3ceu_A Thiamine phosphate pyro 35.1 82 0.0028 27.7 6.6 97 60-190 16-115 (210)
238 3nol_A Glutamine cyclotransfer 34.9 1.9E+02 0.0066 27.2 9.4 80 281-373 128-210 (262)
239 3p42_A Predicted protein; beta 34.6 25 0.00085 32.7 3.2 65 239-305 114-200 (236)
240 1dz3_A Stage 0 sporulation pro 34.4 76 0.0026 24.0 5.5 81 116-199 33-116 (130)
241 1ys7_A Transcriptional regulat 34.4 32 0.0011 29.1 3.7 81 116-199 36-118 (233)
242 1h1y_A D-ribulose-5-phosphate 33.8 1.5E+02 0.0052 26.2 8.2 113 58-190 20-146 (228)
243 2oog_A Glycerophosphoryl diest 33.6 26 0.00089 32.3 3.2 31 48-78 239-270 (287)
244 2pln_A HP1043, response regula 33.2 48 0.0017 25.4 4.3 40 159-199 86-126 (137)
245 3ch0_A Glycerophosphodiester p 32.9 27 0.00091 31.7 3.1 31 48-78 234-265 (272)
246 3qll_A Citrate lyase; beta bar 32.9 86 0.0029 30.1 6.8 132 50-194 44-194 (316)
247 1y0e_A Putative N-acetylmannos 32.7 1.9E+02 0.0066 24.9 8.6 114 60-189 26-146 (223)
248 3l12_A Putative glycerophospho 32.3 30 0.001 32.4 3.4 52 142-199 252-304 (313)
249 3usb_A Inosine-5'-monophosphat 32.3 50 0.0017 33.7 5.3 145 131-296 267-432 (511)
250 2oqr_A Sensory transduction pr 32.2 1E+02 0.0035 25.9 6.5 82 116-200 33-115 (230)
251 2k50_A Replication factor A re 32.2 77 0.0026 25.3 5.4 76 289-383 5-81 (115)
252 3gl9_A Response regulator; bet 32.1 51 0.0017 25.1 4.2 65 132-198 46-114 (122)
253 1u5h_A CITE; TIM barrel, struc 31.8 75 0.0026 29.6 6.1 83 112-199 10-102 (273)
254 3ctl_A D-allulose-6-phosphate 31.5 57 0.0019 29.9 5.1 128 60-204 70-218 (231)
255 1vhc_A Putative KHG/KDPG aldol 31.4 16 0.00054 33.5 1.3 33 166-201 76-108 (224)
256 1iq8_A Archaeosine tRNA-guanin 31.4 22 0.00076 37.2 2.6 54 272-327 509-566 (582)
257 1vc4_A Indole-3-glycerol phosp 31.1 76 0.0026 29.4 5.9 111 59-191 67-183 (254)
258 3m9b_A Proteasome-associated A 31.0 83 0.0028 30.2 6.2 90 267-381 116-222 (251)
259 3bw2_A 2-nitropropane dioxygen 31.0 63 0.0022 31.0 5.5 51 132-189 122-172 (369)
260 2h6r_A Triosephosphate isomera 30.9 1E+02 0.0036 27.6 6.6 112 63-195 75-210 (219)
261 3h41_A NLP/P60 family protein; 30.9 15 0.00053 34.9 1.2 32 364-395 241-275 (311)
262 1id1_A Putative potassium chan 30.7 1E+02 0.0035 25.0 6.0 104 60-187 16-123 (153)
263 4avf_A Inosine-5'-monophosphat 30.6 86 0.0029 31.7 6.6 65 121-188 229-297 (490)
264 3t6k_A Response regulator rece 30.5 55 0.0019 25.4 4.2 66 132-199 48-117 (136)
265 2eix_A NADH-cytochrome B5 redu 30.5 43 0.0015 29.3 3.9 102 214-332 10-124 (243)
266 3eoo_A Methylisocitrate lyase; 30.2 2.2E+02 0.0076 27.4 9.2 73 131-203 110-206 (298)
267 2qv0_A Protein MRKE; structura 29.4 1.9E+02 0.0064 22.0 8.8 64 132-199 55-120 (143)
268 3l4b_C TRKA K+ channel protien 29.3 75 0.0026 27.4 5.3 105 60-191 13-121 (218)
269 1s8n_A Putative antiterminator 29.0 1.2E+02 0.0041 25.2 6.3 38 161-199 87-124 (205)
270 3pbi_A Invasion protein; pepti 28.4 24 0.00083 32.6 2.0 30 365-395 151-180 (214)
271 3gsl_A Disks large homolog 4; 28.3 2.4E+02 0.0081 23.3 8.1 21 288-308 44-65 (196)
272 1q5x_A Regulator of RNAse E ac 28.1 14 0.00049 32.4 0.4 28 292-320 50-77 (161)
273 3ne0_A Resuscitation promoting 27.7 27 0.00091 32.4 2.2 30 365-395 151-180 (214)
274 2r6h_A NADH:ubiquinone oxidore 27.4 14 0.00046 33.4 0.1 40 287-332 124-164 (290)
275 1mb3_A Cell division response 27.4 57 0.002 24.2 3.7 66 132-199 45-114 (124)
276 3a10_A Response regulator; pho 27.4 1.8E+02 0.0062 21.2 6.8 63 132-198 45-109 (116)
277 3qll_A Citrate lyase; beta bar 27.3 2.7E+02 0.0092 26.6 9.2 90 113-205 49-153 (316)
278 1mvo_A PHOP response regulator 27.2 97 0.0033 23.4 5.0 66 132-199 47-114 (136)
279 2jmz_A Hypothetical protein MJ 27.2 74 0.0025 27.8 4.8 33 276-308 98-132 (186)
280 3r2g_A Inosine 5'-monophosphat 27.1 68 0.0023 31.7 5.1 109 58-189 54-169 (361)
281 2wnv_C C1Q chain C, complement 27.0 27 0.00094 29.1 1.9 20 367-386 91-110 (131)
282 1to3_A Putative aldolase YIHT; 26.5 1.8E+02 0.0063 27.6 7.8 14 62-75 113-126 (304)
283 2o55_A Putative glycerophospho 26.4 74 0.0025 28.7 4.8 31 48-78 210-245 (258)
284 3c85_A Putative glutathione-re 26.4 2.6E+02 0.0088 23.1 8.0 108 60-191 52-161 (183)
285 2wnv_B C1Q chain B, complement 26.4 29 0.00099 29.2 2.0 19 368-386 94-112 (136)
286 4f3j_A Complement C1Q tumor ne 26.3 2.4E+02 0.008 23.6 7.7 51 216-270 88-143 (148)
287 2rc5_A Ferredoxin-NADP reducta 25.9 21 0.0007 32.9 1.1 42 288-332 131-173 (314)
288 1wbh_A KHG/KDPG aldolase; lyas 25.6 22 0.00077 32.1 1.2 79 115-197 22-103 (214)
289 3vo2_A Putative uncharacterize 25.3 1.2E+02 0.0041 27.9 6.2 41 288-332 126-166 (310)
290 2j48_A Two-component sensor ki 25.2 69 0.0023 23.0 3.7 76 117-198 31-110 (119)
291 1f20_A Nitric-oxide synthase; 25.0 30 0.001 34.3 2.1 61 265-330 205-285 (435)
292 3l9w_A Glutathione-regulated p 25.0 1.3E+02 0.0046 29.5 6.8 101 60-188 17-121 (413)
293 3cg4_A Response regulator rece 24.8 57 0.0019 25.0 3.3 81 116-199 36-120 (142)
294 1gvh_A Flavohemoprotein; oxido 24.3 1.2E+02 0.0041 28.7 6.1 105 214-333 151-268 (396)
295 3sjl_D Methylamine dehydrogena 24.3 4.1E+02 0.014 26.0 10.1 66 285-358 40-117 (386)
296 1wv2_A Thiazole moeity, thiazo 23.8 90 0.0031 30.1 5.1 47 142-196 175-228 (265)
297 1zcc_A Glycerophosphodiester p 23.7 38 0.0013 30.6 2.4 62 133-201 171-233 (248)
298 2pcn_A S-adenosylmethionine:2- 23.6 23 0.00078 31.2 0.9 29 292-321 48-76 (161)
299 4fdy_A Similar to lipoprotein, 23.6 33 0.0011 33.3 2.0 31 365-395 245-279 (313)
300 2yw3_A 4-hydroxy-2-oxoglutarat 23.5 41 0.0014 30.1 2.5 64 131-201 37-102 (207)
301 4fxs_A Inosine-5'-monophosphat 23.2 95 0.0033 31.5 5.4 56 131-189 242-300 (496)
302 2nn6_H Exosome complex exonucl 23.1 1.1E+02 0.0038 29.7 5.6 98 284-385 41-162 (308)
303 2fli_A Ribulose-phosphate 3-ep 22.8 3.1E+02 0.011 23.5 8.0 109 58-188 17-137 (220)
304 4e38_A Keto-hydroxyglutarate-a 22.6 88 0.003 29.1 4.7 33 166-201 93-125 (232)
305 2cw8_A Endonuclease PI-pkoii; 22.5 2.9E+02 0.0098 28.2 8.8 79 289-382 40-123 (537)
306 2kij_A Copper-transporting ATP 22.4 41 0.0014 27.9 2.2 35 349-383 17-52 (124)
307 2hqr_A Putative transcriptiona 22.3 66 0.0023 27.1 3.5 41 159-200 68-109 (223)
308 4dbe_A Orotidine 5'-phosphate 22.3 76 0.0026 28.9 4.1 32 172-203 125-156 (222)
309 3m6m_D Sensory/regulatory prot 22.2 91 0.0031 24.4 4.1 40 160-200 91-130 (143)
310 3cwo_X Beta/alpha-barrel prote 22.0 1.9E+02 0.0065 24.1 6.3 32 172-203 65-99 (237)
311 2p4v_A Transcription elongatio 22.0 91 0.0031 27.2 4.4 21 370-390 128-148 (158)
312 1rpx_A Protein (ribulose-phosp 21.8 4E+02 0.014 23.2 8.6 111 58-190 24-148 (230)
313 3nfg_A DNA-directed RNA polyme 21.7 23 0.00078 29.7 0.4 27 243-269 18-62 (102)
314 1geq_A Tryptophan synthase alp 21.6 1.9E+02 0.0066 25.5 6.5 93 111-204 7-130 (248)
315 1qks_A Cytochrome CD1 nitrite 21.6 5.4E+02 0.018 26.0 10.6 81 273-356 191-272 (567)
316 3npf_A Putative dipeptidyl-pep 21.6 41 0.0014 31.5 2.2 31 365-395 209-249 (306)
317 4dql_A Bifunctional P-450/NADP 21.5 37 0.0013 33.4 1.9 39 288-331 207-247 (393)
318 2bmw_A Ferredoxin--NADP reduct 21.3 24 0.00083 32.2 0.6 41 288-332 116-156 (304)
319 1o1z_A GDPD, glycerophosphodie 21.3 1.1E+02 0.0036 27.5 4.8 35 48-85 196-231 (234)
320 3e61_A Putative transcriptiona 21.1 1.6E+02 0.0053 25.4 5.7 28 173-200 55-83 (277)
321 2aef_A Calcium-gated potassium 21.1 1.4E+02 0.0047 26.0 5.4 64 117-189 58-125 (234)
322 1jmx_B Amine dehydrogenase; ox 21.1 3.9E+02 0.013 22.8 9.2 71 235-312 2-76 (349)
323 1nxj_A Probable S-adenosylmeth 21.0 29 0.001 31.4 1.0 29 292-321 79-107 (183)
324 3cu5_A Two component transcrip 20.8 1.2E+02 0.0041 23.5 4.5 81 116-199 34-116 (141)
325 1u5h_A CITE; TIM barrel, struc 20.7 1.6E+02 0.0056 27.3 6.1 18 61-78 75-92 (273)
326 3khj_A Inosine-5-monophosphate 20.6 1.2E+02 0.0042 29.5 5.4 55 131-188 116-172 (361)
327 3bmb_A Regulator of nucleoside 20.5 1E+02 0.0036 25.9 4.4 20 371-390 99-119 (136)
328 2c6q_A GMP reductase 2; TIM ba 20.4 2.9E+02 0.01 26.6 8.0 70 116-191 168-254 (351)
329 3fn2_A Putative sensor histidi 20.4 1.3E+02 0.0046 25.5 4.8 40 350-395 50-89 (106)
No 1
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=97.48 E-value=0.00042 Score=59.98 Aligned_cols=95 Identities=14% Similarity=0.190 Sum_probs=60.5
Q ss_pred eeEEEecCCceeeeeeccCCCeEEEEcCCCCeeEEe----eeeEEEeccceeEEEEEecCCCCeEEEEEeEecceEEEec
Q 015764 281 HAYVLVPGGKTCYLSELKSGKEVIVVDQKGRQRTAV----VGRVKIESRPLILVEAKTNSGDQTLYGIILQNAETVALVS 356 (401)
Q Consensus 281 HaYv~~pggkT~YLSEL~sG~eVLvVd~~G~tR~~~----VGRvKIE~RPLlLVeAe~~~~~G~~~sviLQnAETIRLv~ 356 (401)
-+-|.+++|.++-++||+.||+||..|.+|+..... ..|-.-.+++++-|+.+ +|+.+.+ =++|-=++.
T Consensus 5 ~t~V~~~~G~~k~i~eL~~GD~Vla~d~~G~~~~s~V~~~~~r~~~~~~~f~~I~t~----~g~~L~l---Tp~H~i~v~ 77 (145)
T 1at0_A 5 ESTALLESGVRKPLGELSIGDRVLSMTANGQAVYSEVILFMDRNLEQMQNFVQLHTD----GGAVLTV---TPAHLVSVW 77 (145)
T ss_dssp TCEEEBTTSCEEEGGGCCTTCEEEEECTTSCEEEEEEEEEEEEEEEEEEEEEEEEET----TSCEEEE---CTTCEEEEE
T ss_pred CCEEEeCCCCEeEHHHcCCCCEEEEECCCCCEEEEEEEEEEeeCCCcceeEEEEEEC----CCCEEEE---eCCCEEEEe
Confidence 357899999999999999999999999999853332 22323234567777653 4554222 122222221
Q ss_pred CCCCCCCCCceeeeeecCCCCEEEEEec
Q 015764 357 PCKGTGEQEKAIPVTSLKVGDEVLLRVQ 384 (401)
Q Consensus 357 p~~g~~~~g~~vsVt~LK~GD~VL~~~~ 384 (401)
.... +....+...+||+||.|++.-.
T Consensus 78 ~~~~--~~~~~v~A~~l~~GD~v~~~~~ 103 (145)
T 1at0_A 78 QPES--QKLTFVFADRIEEKNQVLVRDV 103 (145)
T ss_dssp ETTT--TEEEEEEGGGCCTTCEEEEECT
T ss_pred cCCC--CcEEEEEHHHCcCCCEEEEecC
Confidence 1100 0135678889999999998854
No 2
>2in0_A Endonuclease PI-MTUI; hydrolase; 1.60A {Mycobacterium tuberculosis} PDB: 2l8l_A 2in9_A 2in8_A 3ifj_A 3igd_A
Probab=96.51 E-value=0.0086 Score=50.41 Aligned_cols=83 Identities=16% Similarity=0.180 Sum_probs=59.1
Q ss_pred EecCCceeeeeec---cCCCeEEEEcCCCCeeEEeeee-EEEeccceeEEEEEecCCCCeEEEEEeEecceEEEecCCCC
Q 015764 285 LVPGGKTCYLSEL---KSGKEVIVVDQKGRQRTAVVGR-VKIESRPLILVEAKTNSGDQTLYGIILQNAETVALVSPCKG 360 (401)
Q Consensus 285 ~~pggkT~YLSEL---~sG~eVLvVd~~G~tR~~~VGR-vKIE~RPLlLVeAe~~~~~G~~~sviLQnAETIRLv~p~~g 360 (401)
.+++|+.+-+.|| +.||+|+..|.+|+.....|=+ .+-..+|++.|+.+ +|+.+. --++|==+ ..+
T Consensus 10 ~~~~G~~~~I~~l~~~~~gd~V~s~d~~g~~~~~~v~~~~~~~~~~~~~i~t~----~G~~i~---~T~~H~~~-t~~-- 79 (139)
T 2in0_A 10 DPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWFDQGTRDVIGLRIA----GGAILW---ATPDHKVL-TEY-- 79 (139)
T ss_dssp CTTTCCEEEHHHHHHTTCCCEEEEECTTSCEEEEEEEEEEEEEEEEEEEEEET----TSCEEE---ECTTCEEE-ETT--
T ss_pred ECCCCCEEEHHHhhCccCCCEEEEECCCCCEEEEEEEEEEEcCCcEEEEEEeC----CCCEEE---ecCCCeEE-ecC--
Confidence 4589999999999 9999999999999975444433 34567888888653 465432 33444333 233
Q ss_pred CCCCCceeeeeecCCCCEEEEE
Q 015764 361 TGEQEKAIPVTSLKVGDEVLLR 382 (401)
Q Consensus 361 ~~~~g~~vsVt~LK~GD~VL~~ 382 (401)
.-+...+||+||.|++.
T Consensus 80 -----gw~~a~~L~~Gd~v~~~ 96 (139)
T 2in0_A 80 -----GWRAAGELRKGDRVAVR 96 (139)
T ss_dssp -----EEEEGGGCCTTCEEEEE
T ss_pred -----CcEEHHHCCCCCEEEeC
Confidence 24678899999999986
No 3
>1mi8_A DNAB intein; all beta-strands, hydrolase; 2.00A {Synechocystis SP} SCOP: b.86.1.2
Probab=96.49 E-value=0.014 Score=50.13 Aligned_cols=86 Identities=14% Similarity=0.178 Sum_probs=62.8
Q ss_pred eEEEecC-Cceeeeeecc--CCCeEEEEcC-CCCeeEEeeeeE-EEeccceeEEEEEecCCCCeEEEEEeEecceEEEec
Q 015764 282 AYVLVPG-GKTCYLSELK--SGKEVIVVDQ-KGRQRTAVVGRV-KIESRPLILVEAKTNSGDQTLYGIILQNAETVALVS 356 (401)
Q Consensus 282 aYv~~pg-gkT~YLSEL~--sG~eVLvVd~-~G~tR~~~VGRv-KIE~RPLlLVeAe~~~~~G~~~sviLQnAETIRLv~ 356 (401)
+-|.+++ |+..-+.||. .|++|+.+|. +|+.....|-++ +...+|++.|+.+ +|+.+.+ -++|==++.
T Consensus 8 t~V~~~~~G~~~~I~el~~~~g~~V~s~d~~~g~~~~~~v~~~~~~~~~~~~~i~t~----~G~~i~~---T~~H~~~t~ 80 (158)
T 1mi8_A 8 SLISLASTGKRVSIKDLLDEKDFEIWAINEQTMKLESAKVSRVFMTGKKLVYILKTR----LGRTIKA---TANHRFLTI 80 (158)
T ss_dssp CEEEETTTTEEEESGGGTTCCSCEEEEEETTTTEEEEEECCEEEEEEEEEEEEEEET----TCCEEEE---CTTCEEEET
T ss_pred cEEEecCCCeEEEHHHhhhccCCEEEEEeCCCCEEEEEEeeeeeecCCceEEEEEEC----CCCEEEE---eCCceEEec
Confidence 4678899 9999999999 8999999996 788777666444 3566888888774 4665433 344433333
Q ss_pred CCCCCCCCCceeeeeecCCCCEEEEE
Q 015764 357 PCKGTGEQEKAIPVTSLKVGDEVLLR 382 (401)
Q Consensus 357 p~~g~~~~g~~vsVt~LK~GD~VL~~ 382 (401)
+ | -+..-+||+||.|++.
T Consensus 81 -~------g-w~~a~~L~~GD~v~~~ 98 (158)
T 1mi8_A 81 -D------G-WKRLDELSLKEHIALP 98 (158)
T ss_dssp -T------E-EEEGGGCCTTCEEEEE
T ss_pred -c------C-CEEhhhCCCCCEEEec
Confidence 3 1 3578899999999985
No 4
>1am2_A MXE GYRA intein; protein splicing; 2.20A {Mycobacterium xenopi} SCOP: b.86.1.2
Probab=95.76 E-value=0.038 Score=49.86 Aligned_cols=87 Identities=18% Similarity=0.227 Sum_probs=60.0
Q ss_pred eEEEecCCceeeeeeccCCCe--------EEEEcCCCCeeEEeeeeEEEeccceeEEEEEecCCCCeEEEEEeEecceEE
Q 015764 282 AYVLVPGGKTCYLSELKSGKE--------VIVVDQKGRQRTAVVGRVKIESRPLILVEAKTNSGDQTLYGIILQNAETVA 353 (401)
Q Consensus 282 aYv~~pggkT~YLSEL~sG~e--------VLvVd~~G~tR~~~VGRvKIE~RPLlLVeAe~~~~~G~~~sviLQnAETIR 353 (401)
+-|.+++|++.-+.||..|++ |+.+|.+|+.... +.-.+-..+|++.|+.+ +|+.+.+- ++|==
T Consensus 7 T~V~~~dG~~~~I~eL~~G~~~~~~~~v~v~~~d~~g~~~~~-~~~~~~g~k~~~~I~T~----~G~~i~~T---~dH~~ 78 (199)
T 1am2_A 7 ALVALPEGESVRIADIVPGARPNSDNAIDLKVLDRHGNPVLA-DRLFHSGEHPVYAVRTV----EGLRVTGT---ANHPL 78 (199)
T ss_dssp CEEECSTTCEEEGGGSSTTCCTTEEEEEEEEEECTTSCEEEE-EEEEEEEEEEEEEEEET----TSCEEEEC---TTCEE
T ss_pred eEEEcCCCCEEEHHHhhCccccccccceEEEEECCCCCEEEE-EEEEECCCceEEEEEEC----CCCEEEEe---CCCEE
Confidence 457889999999999999998 9999999987665 33334456788888763 46543321 12211
Q ss_pred EecC--CCCCCCCC----ceeeeeecCCCCEEEEE
Q 015764 354 LVSP--CKGTGEQE----KAIPVTSLKVGDEVLLR 382 (401)
Q Consensus 354 Lv~p--~~g~~~~g----~~vsVt~LK~GD~VL~~ 382 (401)
++.. + | .-+...+||+||.|++.
T Consensus 79 lt~~~~~------g~~~~~w~~a~eLk~GD~v~~~ 107 (199)
T 1am2_A 79 LCLVDVA------GVPTLLWKLIDEIKPGDYAVIQ 107 (199)
T ss_dssp EEEEEET------TEEEEEEEEGGGCCTTCEEEEE
T ss_pred EEeccCC------CccceeEEEhhHCCCCCEEEEC
Confidence 1111 1 2 34678999999999974
No 5
>2imz_A Endonuclease PI-MTUI; N-terminal cysteine sulfinic acid C-terminal aminosuccinimide, hydrolase; 1.70A {Mycobacterium tuberculosis}
Probab=94.19 E-value=0.12 Score=44.53 Aligned_cols=86 Identities=14% Similarity=0.142 Sum_probs=58.7
Q ss_pred eEEEe-cCCceeeeeeccC---CCeEEEEcCCCCeeEEeeee-EEEeccceeEEEEEecCCCCeEEEEEeEecceEEEec
Q 015764 282 AYVLV-PGGKTCYLSELKS---GKEVIVVDQKGRQRTAVVGR-VKIESRPLILVEAKTNSGDQTLYGIILQNAETVALVS 356 (401)
Q Consensus 282 aYv~~-pggkT~YLSEL~s---G~eVLvVd~~G~tR~~~VGR-vKIE~RPLlLVeAe~~~~~G~~~sviLQnAETIRLv~ 356 (401)
+-|.+ .+|++.-+.||.. |++|+.+|.+|+.....|=+ .+...+|++.|+.+ +|+.+.+ -++|==++
T Consensus 6 t~V~~~~~G~~~~I~el~~~~~~~~V~~~d~~g~~~~~~v~~~~~~~~~~~~~i~t~----~G~~i~~---T~~H~~~t- 77 (168)
T 2imz_A 6 TRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWFDQGTRDVIGLRIA----GGAILWA---TPDHKVLT- 77 (168)
T ss_dssp CEEECTTTCCEEEHHHHHHTTCCCEEEEECTTSCEEEEEEEEEEEEEEEEEEEEEET----TSCEEEE---CTTCEEEE-
T ss_pred CEEEECCCCcEEEHHHhhCccCCCEEEEECCCCCEEEEEeeeEEEcCCceEEEEEeC----CCCEEEE---cCCCCEEE-
Confidence 34666 7888999999988 78999999999876444433 34557888888763 4664432 23333233
Q ss_pred CCCCCCCCCceeeeeecCCCCEEEEE
Q 015764 357 PCKGTGEQEKAIPVTSLKVGDEVLLR 382 (401)
Q Consensus 357 p~~g~~~~g~~vsVt~LK~GD~VL~~ 382 (401)
.+ .-+...+||+||.|++.
T Consensus 78 ~~-------gw~~a~~L~~Gd~v~~~ 96 (168)
T 2imz_A 78 EY-------GWRAAGELRKGDRVAQP 96 (168)
T ss_dssp TT-------EEEEGGGCCTTCEEECC
T ss_pred cc-------CCEEHHHCCCCCEEEEe
Confidence 23 13578899999999864
No 6
>4e2u_A PHO RADA intein; HINT-fold, unknown function; 1.58A {Pyrococcus horikoshii} PDB: 2lqm_A 4e2t_A*
Probab=93.88 E-value=0.25 Score=43.25 Aligned_cols=91 Identities=13% Similarity=0.113 Sum_probs=62.8
Q ss_pred eEEEecCCceeeeeeccCC-----------------------CeEEEEc-CCCCeeEEeeeeE-EEeccceeEEEEEecC
Q 015764 282 AYVLVPGGKTCYLSELKSG-----------------------KEVIVVD-QKGRQRTAVVGRV-KIESRPLILVEAKTNS 336 (401)
Q Consensus 282 aYv~~pggkT~YLSEL~sG-----------------------~eVLvVd-~~G~tR~~~VGRv-KIE~RPLlLVeAe~~~ 336 (401)
+-|++++|.+.=+.||..+ ++|+.+| .+|+.....|=++ +...+||+.|+.+
T Consensus 10 t~V~l~dG~~~~I~el~~~~~~~~~~~g~~~~~~g~~~~~~~~~V~s~d~~~g~~~~~~v~~~~~~~~~~~~~i~t~--- 86 (168)
T 4e2u_A 10 TEVYYENDTVPHMESIEEMYSKYASMNGELPFDNGYAVPLDNVFVYTLDIASGEIKKTRASYIYREKVEKLIEIKLS--- 86 (168)
T ss_dssp CEEEEEETTEEEEEEHHHHHHHHHHHHCCEEETTEEEEECSSEEEEEECTTTCCEEEEECCEEEEEEEEEEEEEEET---
T ss_pred CEEEEeCCCEEEHHHHHhhhhhhccccCceeecccccccCCCeEEEEEeCCCCCEEEEEEeEEEEcCCCeEEEEEEC---
Confidence 4678888988888888773 8999999 8999887766443 4444577777663
Q ss_pred CCCeEEEEEeEecceEEEecCCCCCCCCCceeeeeecCCCCEEEEEec
Q 015764 337 GDQTLYGIILQNAETVALVSPCKGTGEQEKAIPVTSLKVGDEVLLRVQ 384 (401)
Q Consensus 337 ~~G~~~sviLQnAETIRLv~p~~g~~~~g~~vsVt~LK~GD~VL~~~~ 384 (401)
+|+.+.+ -++|==++..++ ..-+...+||+||.|++.-.
T Consensus 87 -~G~~i~~---T~~Hp~~~~~~~-----~~w~~a~~L~~Gd~l~~~~g 125 (168)
T 4e2u_A 87 -SGYSLKV---TPSHPVLLFRDG-----LQWVPAAEVKPGDVVVGVRN 125 (168)
T ss_dssp -TSCEEEE---CTTCEEEEESSS-----EEEEEGGGCCTTCEEEEEET
T ss_pred -CCCEEEE---CCCCcEEEEcCC-----CEEEEHHHCCCCCEEEeccC
Confidence 4664333 444444443321 25678899999999988653
No 7
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=91.93 E-value=0.27 Score=46.18 Aligned_cols=92 Identities=13% Similarity=0.212 Sum_probs=68.3
Q ss_pred CCeeEEEEEe-cChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc---CCCceEEEEcCCHHHHHHHHHHhhccc
Q 015764 108 DRRVGSIIEV-STPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ---GSGKTVFAISKTPSEAQIFLEALEQGL 183 (401)
Q Consensus 108 gk~v~~~~~v-~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q---~~~~~l~a~v~~~~eA~~al~~LE~G~ 183 (401)
...++.++.+ .+++-.+.++.. ..|+++++..| .+.|.+.+.+.++ ..+..++..++..+. .....+|+.|+
T Consensus 14 ~~~~g~~~~~~~~p~~~e~a~~~--g~D~vilDlEh-av~~~~k~~~~l~a~~~~~~~~~VRVn~~~~-~di~~~ld~G~ 89 (261)
T 3qz6_A 14 KSVVGTMLNLVYNPDIVRIYAEA--GLDYFIVDCEH-AAYTFREINHLVSVAKNAGVSVLVRIPQVDR-AHVQRLLDIGA 89 (261)
T ss_dssp CCEEEEEESSCCCTTHHHHHHHT--TCSEEEEESSS-SCCCHHHHHHHHHHHHHHTCEEEEECSSCCH-HHHHHHHHHTC
T ss_pred CCEEEEEEecCCCHHHHHHHhcC--CcCEEEEeccC-CCCCHHHHHHHHHHHhhcCCeEEEEeCCCCH-HHHHHHHhcCC
Confidence 3557888888 888877766542 58999998776 4667665555443 235678899987654 35667888999
Q ss_pred CeEEEe-cCCHHHHHHHHHhh
Q 015764 184 GGIVLK-VEDVKAVLALKEYF 203 (401)
Q Consensus 184 DGVvl~-~~d~~ev~~l~~~~ 203 (401)
|||+++ .+++++++++.+.+
T Consensus 90 ~gI~lP~v~saed~~~~~~~~ 110 (261)
T 3qz6_A 90 EGFMIPGVQSAETMRETVRLA 110 (261)
T ss_dssp CEEEETTCCSHHHHHHHHHHH
T ss_pred CEEEECCcCCHHHHHHHHHHh
Confidence 999997 57899999888876
No 8
>2lcj_A PAB POLC intein; hydrolase; NMR {Pyrococcus abyssi}
Probab=91.60 E-value=0.84 Score=40.35 Aligned_cols=74 Identities=20% Similarity=0.194 Sum_probs=45.0
Q ss_pred CCCeEEEEc-CCCCeeEEeeeeEEE-e-ccceeEEEEEecCCCCeEEEEEeEecceEEEecCCCCCCCCCceeeeeecCC
Q 015764 299 SGKEVIVVD-QKGRQRTAVVGRVKI-E-SRPLILVEAKTNSGDQTLYGIILQNAETVALVSPCKGTGEQEKAIPVTSLKV 375 (401)
Q Consensus 299 sG~eVLvVd-~~G~tR~~~VGRvKI-E-~RPLlLVeAe~~~~~G~~~sviLQnAETIRLv~p~~g~~~~g~~vsVt~LK~ 375 (401)
.|.+|+.+| .+|+.+...|=++-- . .++|+.|+.+ +|+.+.+. ++|==++..++ .-..+...+||+
T Consensus 45 ~~~~V~s~d~~~gk~~~~~v~~v~~~~~~~~~~~I~t~----~G~~I~~T---~~H~~~v~~~g----~~~~~~A~eLk~ 113 (185)
T 2lcj_A 45 REIKVYSIDLETGKVVLTDIEDVIKAPATDHLIRFELE----DGRSFETT---VDHPVLVYENG----RFIEKRAFEVKE 113 (185)
T ss_dssp SCEEEEEEETTTTEEEEEEEEEEEEEECCSCEEEEEET----TSCEEEEC---SSSEEEEEETT----EEEEEEGGGCCT
T ss_pred CCcEEEEEECCCCcEEEEEeeeEEEcCCCceEEEEEEC----CCCEEEEC---CCCEEEEecCC----eEEEEEHHHCCC
Confidence 467899999 899888877755543 2 4567777763 36554321 11111211121 012567889999
Q ss_pred CCEEEEEe
Q 015764 376 GDEVLLRV 383 (401)
Q Consensus 376 GD~VL~~~ 383 (401)
||.|++.-
T Consensus 114 GD~v~v~~ 121 (185)
T 2lcj_A 114 GDKVLVSE 121 (185)
T ss_dssp TCEEEECC
T ss_pred CCEEEEcc
Confidence 99999863
No 9
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=90.78 E-value=1.6 Score=41.27 Aligned_cols=117 Identities=15% Similarity=0.137 Sum_probs=68.9
Q ss_pred chhHhHHHHHhCCcEEEEcCcc--hhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeE
Q 015764 59 SKQVMTAAVERGWNTFVFLSEN--QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENI 136 (401)
Q Consensus 59 ~K~~vt~AlEsG~~~~v~~~~~--~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~v 136 (401)
+...+..|.+.|+|++++...+ .+..+++-.... .-|.. ..+++.+.++++.+.. . .++++
T Consensus 124 d~~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~-------------~lGl~--~lvev~t~ee~~~A~~-~-Gad~I 186 (272)
T 3qja_A 124 QPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTE-------------SLGMT--ALVEVHTEQEADRALK-A-GAKVI 186 (272)
T ss_dssp SHHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHH-------------HTTCE--EEEEESSHHHHHHHHH-H-TCSEE
T ss_pred CHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHH-------------HCCCc--EEEEcCCHHHHHHHHH-C-CCCEE
Confidence 4556889999999999873110 111121111100 11332 4568899998877654 3 58999
Q ss_pred EEeCCCCee--eehhhhhhcccCC--CceEEEE--cCCHHHHHHHHHHhhcccCeEEEec-----CCHHH
Q 015764 137 VIDLPDWQV--IPAENIVASFQGS--GKTVFAI--SKTPSEAQIFLEALEQGLGGIVLKV-----EDVKA 195 (401)
Q Consensus 137 vv~~~DW~i--IPlENliA~~q~~--~~~l~a~--v~~~~eA~~al~~LE~G~DGVvl~~-----~d~~e 195 (401)
-++.+|-+- ..++.+..-.+.. +..++++ +++.++++. .++.|+|||++-. +||.+
T Consensus 187 Gv~~r~l~~~~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~---l~~~GadgvlVGsal~~a~dp~~ 253 (272)
T 3qja_A 187 GVNARDLMTLDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLA---YAGAGADAVLVGEGLVTSGDPRA 253 (272)
T ss_dssp EEESBCTTTCCBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHH---HHHTTCSEEEECHHHHTCSCHHH
T ss_pred EECCCcccccccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHH---HHHcCCCEEEEcHHHhCCCCHHH
Confidence 998765322 3344443222221 3456665 467888765 4678999999854 67764
No 10
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=89.27 E-value=1.9 Score=41.10 Aligned_cols=93 Identities=10% Similarity=0.090 Sum_probs=66.1
Q ss_pred CCC-eeEEEEEecChhhhhhhccccCCCCeEEEeCCCCeeeehhhh---hhcccCCCceEEEEcCCHHHHHHHHHHhhcc
Q 015764 107 GDR-RVGSIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENI---VASFQGSGKTVFAISKTPSEAQIFLEALEQG 182 (401)
Q Consensus 107 ~gk-~v~~~~~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENl---iA~~q~~~~~l~a~v~~~~eA~~al~~LE~G 182 (401)
+|+ .++.++.+.+++..+.++. ..+|+++++..|-- .-.|++ +.+++..+..++..++..+.. ....+|+.|
T Consensus 36 ~G~~~~gl~~~~~~p~~~e~a~~--~GaD~v~lDlEh~~-~~~~~~~~~l~a~~~~~~~~~VRv~~~d~~-di~~~ld~g 111 (287)
T 2v5j_A 36 AGRPQIGLWLGLSSSYSAELLAG--AGFDWLLIDGEHAP-NNVQTVLTQLQAIAPYPSQPVVRPSWNDPV-QIKQLLDVG 111 (287)
T ss_dssp TTCCEEEEEECSCCHHHHHHHHT--SCCSEEEEESSSSS-CCHHHHHHHHHHHTTSSSEEEEECSSSCHH-HHHHHHHTT
T ss_pred CCCcEEEEEEECCCHHHHHHHHh--CCCCEEEEeCCCcc-chHHHHHHHHHHHHhcCCCEEEEECCCCHH-HHHHHHhCC
Confidence 456 7889999999999877664 35899999888762 223333 333344455788888765543 456678899
Q ss_pred cCeEEEe-cCCHHHHHHHHHhh
Q 015764 183 LGGIVLK-VEDVKAVLALKEYF 203 (401)
Q Consensus 183 ~DGVvl~-~~d~~ev~~l~~~~ 203 (401)
+|||+++ .+++++++++.+.+
T Consensus 112 a~~ImlP~V~saeea~~~~~~~ 133 (287)
T 2v5j_A 112 TQTLLVPMVQNADEAREAVRAT 133 (287)
T ss_dssp CCEEEESCCCSHHHHHHHHHHT
T ss_pred CCEEEeCCCCCHHHHHHHHHHh
Confidence 9999996 45688988887765
No 11
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=88.34 E-value=1.6 Score=39.44 Aligned_cols=143 Identities=15% Similarity=0.188 Sum_probs=78.1
Q ss_pred EEEEe--CchhHhHHHHHhCCcEEEEcCcchhhHhhccce------eeeeeeeecCCc--------cccCCCCeeEEEEE
Q 015764 53 VWIWT--ESKQVMTAAVERGWNTFVFLSENQQLAIDWSTI------ALLDPLFIKEGE--------VYDSGDRRVGSIIE 116 (401)
Q Consensus 53 vWiw~--~~K~~vt~AlEsG~~~~v~~~~~~~~~~~~~~i------~~i~~l~~~~g~--------~~~~~gk~v~~~~~ 116 (401)
+.+-+ .+.+....|++.|++.++..+...........+ ..++.+++||.. .+...|..+. .
T Consensus 77 vi~lt~~~~~~~~~~a~~~Ga~dyl~Kp~~~~~~~~~~~~~~~~~~~~~~ILivDD~~~~~~~l~~~L~~~~~~v~---~ 153 (259)
T 3luf_A 77 VVILTADISEDKREAWLEAGVLDYVMKDSRHSLQYAVGLVHRLYLNQQIEVLVVDDSRTSRHRTMAQLRKQLLQVH---E 153 (259)
T ss_dssp EEEEECC-CHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHTTTCEEE---E
T ss_pred EEEEEccCCHHHHHHHHHCCCcEEEeCCchhHHHHHHHhhhhHhhcCCCcEEEEeCCHHHHHHHHHHHHHcCcEEE---E
Confidence 55555 367788889999999999876432221111111 224456677763 2345565443 4
Q ss_pred ecChhhhhhhccccCCCCeEEEeCCCCeeeehhh---hhhccc----CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEe
Q 015764 117 VSTPQELQQLQPADGQAENIVIDLPDWQVIPAEN---IVASFQ----GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLK 189 (401)
Q Consensus 117 v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlEN---liA~~q----~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~ 189 (401)
..+.++.-.........+.+++ |+. .|-.| ++..+. .....|+....+. +......+++.|+++.+.+
T Consensus 154 a~~~~eal~~l~~~~~~dlvll---D~~-mP~~dG~~l~~~lr~~~~~~~~~ii~~s~~~-~~~~~~~a~~~Ga~~yl~K 228 (259)
T 3luf_A 154 ASHAREALATLEQHPAIRLVLV---DYY-MPEIDGISLVRMLRERYSKQQLAIIGISVSD-KRGLSARYLKQGANDFLNQ 228 (259)
T ss_dssp ESSHHHHHHHHHHCTTEEEEEE---CSC-CSSSCHHHHHHHHHHHCCTTTSEEEEEECSS-SSSHHHHHHHTTCSEEEES
T ss_pred eCCHHHHHHHHhcCCCCCEEEE---cCC-CCCCCHHHHHHHHHhccCCCCCeEEEEEccC-CHHHHHHHHhcChhheEcC
Confidence 5666543322221112355666 443 23211 222221 2234565444332 3344567899999999999
Q ss_pred cCCHHHHHH-HHHhh
Q 015764 190 VEDVKAVLA-LKEYF 203 (401)
Q Consensus 190 ~~d~~ev~~-l~~~~ 203 (401)
|-+++++.. ++..+
T Consensus 229 P~~~~~L~~~i~~~l 243 (259)
T 3luf_A 229 PFEPEELQCRVSHNL 243 (259)
T ss_dssp SCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 999988753 34444
No 12
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=87.95 E-value=2.6 Score=39.02 Aligned_cols=89 Identities=16% Similarity=0.169 Sum_probs=64.9
Q ss_pred eeEEEEEecChhhhhhhccccCCCCeEEEeCCCCeeeehh-----hhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccC
Q 015764 110 RVGSIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAE-----NIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLG 184 (401)
Q Consensus 110 ~v~~~~~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlE-----NliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~D 184 (401)
.++.+..+.+++..+.+.. ..+|+++++..|- |.| ..+.+++..+..++..++..+..- ...+|+.|+|
T Consensus 20 ~~~~~l~v~~p~~~e~a~~--~gaD~v~lDlEd~---p~~~~~a~~~~~~~~~~~~~~~VRv~~~~~~~-i~~~l~~g~~ 93 (256)
T 1dxe_A 20 QIGCWSALSNPISTEVLGL--AGFDWLVLDGEHA---PNDISTFIPQLMALKGSASAPVVRVPTNEPVI-IKRLLDIGFY 93 (256)
T ss_dssp EEEEEECSCSHHHHHHHTT--SCCSEEEEESSSS---SCCHHHHHHHHHHTTTCSSEEEEECSSSCHHH-HHHHHHTTCC
T ss_pred eEEEEEeCCCHHHHHHHHh--CCCCEEEEcCCCC---CCCHHHHHHHHHHHHhCCCcEEEECCCCCHHH-HHHHHhcCCc
Confidence 4677888888888777654 3589999998886 653 445555544557888887655443 5678899999
Q ss_pred eEEEe-cCCHHHHHHHHHhhc
Q 015764 185 GIVLK-VEDVKAVLALKEYFD 204 (401)
Q Consensus 185 GVvl~-~~d~~ev~~l~~~~~ 204 (401)
||+++ .+++++++++.+.+.
T Consensus 94 gI~~P~V~s~~ev~~~~~~~~ 114 (256)
T 1dxe_A 94 NFLIPFVETKEEAELAVASTR 114 (256)
T ss_dssp EEEESCCCSHHHHHHHHHTTS
T ss_pred eeeecCcCCHHHHHHHHHHhc
Confidence 99885 457899988887763
No 13
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=87.33 E-value=2 Score=40.12 Aligned_cols=92 Identities=8% Similarity=0.076 Sum_probs=64.8
Q ss_pred CC-eeEEEEEecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhh---cccCCCceEEEEcCCHHHHHHHHHHhhccc
Q 015764 108 DR-RVGSIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVA---SFQGSGKTVFAISKTPSEAQIFLEALEQGL 183 (401)
Q Consensus 108 gk-~v~~~~~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA---~~q~~~~~l~a~v~~~~eA~~al~~LE~G~ 183 (401)
|+ .++.+..+.+++..+.++.. .+|+++++..|- ....|.+.+ +++..+..++..++..+. .....+|+.|+
T Consensus 16 g~~~~g~~~~~~~p~~~e~a~~~--GaD~v~lDlE~~-~~~~~~~~~~~~a~~~~~~~~~VRv~~~~~-~~i~~~l~~g~ 91 (267)
T 2vws_A 16 GEVQIGLWLSSTTAYMAEIAATS--GYDWLLIDGEHA-PNTIQDLYHQLQAVAPYASQPVIRPVEGSK-PLIKQVLDIGA 91 (267)
T ss_dssp TCCEEEEEECSCCHHHHHHHHTT--CCSEEEEETTTS-CCCHHHHHHHHHHHTTSSSEEEEECSSCCH-HHHHHHHHTTC
T ss_pred CCCEEEEEEeCCCHHHHHHHHhC--CCCEEEEcCCCC-CCCHHHHHHHHHHHHhCCCcEEEEeCCCCH-HHHHHHHHhCC
Confidence 55 57888889999987776643 589999988875 344454433 333345568888875443 33456788999
Q ss_pred CeEEEec-CCHHHHHHHHHhh
Q 015764 184 GGIVLKV-EDVKAVLALKEYF 203 (401)
Q Consensus 184 DGVvl~~-~d~~ev~~l~~~~ 203 (401)
|||+++- +++++++++.+.+
T Consensus 92 ~~I~~P~V~s~ee~~~~~~~~ 112 (267)
T 2vws_A 92 QTLLIPMVDTAEQARQVVSAT 112 (267)
T ss_dssp CEEEECCCCSHHHHHHHHHHT
T ss_pred CEEEeCCCCCHHHHHHHHHHH
Confidence 9999964 6788988887765
No 14
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=86.53 E-value=3.1 Score=38.22 Aligned_cols=107 Identities=21% Similarity=0.181 Sum_probs=62.7
Q ss_pred hhHhHHHHHhCCcEEEEcCc------c-hhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCC
Q 015764 60 KQVMTAAVERGWNTFVFLSE------N-QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQ 132 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~------~-~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~ 132 (401)
.+.+..+++.|+|.+++... . .++.+...+. |.. ..+.+.+.++.+.+.. ..
T Consensus 91 ~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~-----------------g~~--v~~~v~t~eea~~a~~--~G 149 (229)
T 3q58_A 91 LQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLH-----------------GLL--AMADCSTVNEGISCHQ--KG 149 (229)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT-----------------TCE--EEEECSSHHHHHHHHH--TT
T ss_pred HHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHC-----------------CCE--EEEecCCHHHHHHHHh--CC
Confidence 44578899999998876431 1 2333333222 333 3447888887655443 35
Q ss_pred CCeEEEeCCCCe-----eeehhhhhhcccCCCceEEEE--cCCHHHHHHHHHHhhcccCeEEEec
Q 015764 133 AENIVIDLPDWQ-----VIPAENIVASFQGSGKTVFAI--SKTPSEAQIFLEALEQGLGGIVLKV 190 (401)
Q Consensus 133 ~~~vvv~~~DW~-----iIPlENliA~~q~~~~~l~a~--v~~~~eA~~al~~LE~G~DGVvl~~ 190 (401)
++++.+...+.+ --|--+++.++...+..+++. ++++++++.++ +.|+|||++-+
T Consensus 150 ad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~~ipvIA~GGI~t~~d~~~~~---~~GadgV~VGs 211 (229)
T 3q58_A 150 IEFIGTTLSGYTGPITPVEPDLAMVTQLSHAGCRVIAEGRYNTPALAANAI---EHGAWAVTVGS 211 (229)
T ss_dssp CSEEECTTTTSSSSCCCSSCCHHHHHHHHTTTCCEEEESSCCSHHHHHHHH---HTTCSEEEECH
T ss_pred CCEEEecCccCCCCCcCCCCCHHHHHHHHHcCCCEEEECCCCCHHHHHHHH---HcCCCEEEEch
Confidence 788865322211 123224444443335567776 56888887665 56999999864
No 15
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=84.87 E-value=1.7 Score=38.13 Aligned_cols=107 Identities=21% Similarity=0.211 Sum_probs=61.4
Q ss_pred hhHhHHHHHhCCcEEEEcCcchhhHhhccceee-ee-eeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEE
Q 015764 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIAL-LD-PLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIV 137 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~~~~~~~~~~~i~~-i~-~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vv 137 (401)
.+.+..+++.|++.+-+...+.+..+.+.++.. .. ++.+ +. ..+.++++.+.+... .++.+.
T Consensus 22 ~~~~~~~~~~G~~~i~l~~~~~~~~~~i~~i~~~~~~~l~v-------------g~-g~~~~~~~i~~a~~~--Gad~V~ 85 (212)
T 2v82_A 22 LAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALI-------------GA-GTVLKPEQVDALARM--GCQLIV 85 (212)
T ss_dssp HHHHHHHHHHTCCEEEEETTSTTHHHHHHHHHHHHTTTSEE-------------EE-ECCCSHHHHHHHHHT--TCCEEE
T ss_pred HHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHhCCCCeEE-------------Ee-ccccCHHHHHHHHHc--CCCEEE
Confidence 677888999999998876544333333333221 00 1111 11 124567765554432 567776
Q ss_pred EeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 138 IDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 138 v~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
+...+. .++...+..+..++..+.|++|++. +.+.|+|.|.+.+.
T Consensus 86 ~~~~~~------~~~~~~~~~g~~~~~g~~t~~e~~~---a~~~G~d~v~v~~t 130 (212)
T 2v82_A 86 TPNIHS------EVIRRAVGYGMTVCPGCATATEAFT---ALEAGAQALKIFPS 130 (212)
T ss_dssp CSSCCH------HHHHHHHHTTCEEECEECSHHHHHH---HHHTTCSEEEETTH
T ss_pred eCCCCH------HHHHHHHHcCCCEEeecCCHHHHHH---HHHCCCCEEEEecC
Confidence 544332 2333333334456666899999854 46789999998653
No 16
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=83.75 E-value=0.56 Score=44.02 Aligned_cols=140 Identities=10% Similarity=0.047 Sum_probs=85.5
Q ss_pred cEEEEEe-CchhHhHHHHHhCCcEEEEcCcch----hhHh-h-----cc---ceeeeeeeeecCCc---cccCCCCeeEE
Q 015764 51 KRVWIWT-ESKQVMTAAVERGWNTFVFLSENQ----QLAI-D-----WS---TIALLDPLFIKEGE---VYDSGDRRVGS 113 (401)
Q Consensus 51 K~vWiw~-~~K~~vt~AlEsG~~~~v~~~~~~----~~~~-~-----~~---~i~~i~~l~~~~g~---~~~~~gk~v~~ 113 (401)
--.|+.. .+.+.+..|..+|+|.++++-||. +++. . +. -+-||++. +..+ .++ .|-....
T Consensus 17 ~g~~~~~~~~p~~~e~a~~~g~D~vilDlEhav~~~~k~~~~l~a~~~~~~~~~VRVn~~--~~~di~~~ld-~G~~gI~ 93 (261)
T 3qz6_A 17 VGTMLNLVYNPDIVRIYAEAGLDYFIVDCEHAAYTFREINHLVSVAKNAGVSVLVRIPQV--DRAHVQRLLD-IGAEGFM 93 (261)
T ss_dssp EEEEESSCCCTTHHHHHHHTTCSEEEEESSSSCCCHHHHHHHHHHHHHHTCEEEEECSSC--CHHHHHHHHH-HTCCEEE
T ss_pred EEEEEecCCCHHHHHHHhcCCcCEEEEeccCCCCCHHHHHHHHHHHhhcCCeEEEEeCCC--CHHHHHHHHh-cCCCEEE
Confidence 4478888 889999999999999999998771 1111 1 11 11122210 0001 111 1222222
Q ss_pred EEEecChhhhhhhccccCC-----CCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhh-cccCeEE
Q 015764 114 IIEVSTPQELQQLQPADGQ-----AENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALE-QGLGGIV 187 (401)
Q Consensus 114 ~~~v~~~e~~e~~~~~~~~-----~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE-~G~DGVv 187 (401)
+=.|.+++|.+.+...... ..+-......|...|+.+-++... .+..|++-+.+++-...+-+++. .|+||+.
T Consensus 94 lP~v~saed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~-~~~~v~~mIEt~~av~~~~eIaa~~~vd~l~ 172 (261)
T 3qz6_A 94 IPGVQSAETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERN-DEIFIMAQIEHVKAVEDIDSILAVQGVDAVI 172 (261)
T ss_dssp ETTCCSHHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHH-TTCEEEEEECCHHHHHTHHHHHTSTTCCEEE
T ss_pred ECCcCCHHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHhcCC-CCeEEEEEECCHHHHHHHHHHhCCCCCCEEE
Confidence 2347788888876655421 011011223455556666666532 46789999999999999989987 4999999
Q ss_pred EecCCHH
Q 015764 188 LKVEDVK 194 (401)
Q Consensus 188 l~~~d~~ 194 (401)
+-+.|..
T Consensus 173 iG~~DL~ 179 (261)
T 3qz6_A 173 FGPRDLS 179 (261)
T ss_dssp ECHHHHH
T ss_pred ECHHHHH
Confidence 9888754
No 17
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=83.36 E-value=5.9 Score=36.60 Aligned_cols=139 Identities=13% Similarity=0.051 Sum_probs=74.7
Q ss_pred EEEEEeCchhHhHHHHHhCCcEEEEcCcc----hhhHhhccce---eeeee-eeecCC------ccccCCCCeeEEEEEe
Q 015764 52 RVWIWTESKQVMTAAVERGWNTFVFLSEN----QQLAIDWSTI---ALLDP-LFIKEG------EVYDSGDRRVGSIIEV 117 (401)
Q Consensus 52 ~vWiw~~~K~~vt~AlEsG~~~~v~~~~~----~~~~~~~~~i---~~i~~-l~~~~g------~~~~~~gk~v~~~~~v 117 (401)
..|....+.+.+..|..+|+|.++++-|| ++.++..-.. .-..+ +-+.+. ..++ .|-.-..+=.|
T Consensus 22 ~~~l~v~~p~~~e~a~~~gaD~v~lDlEd~p~~~~~a~~~~~~~~~~~~~~~VRv~~~~~~~i~~~l~-~g~~gI~~P~V 100 (256)
T 1dxe_A 22 GCWSALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPTNEPVIIKRLLD-IGFYNFLIPFV 100 (256)
T ss_dssp EEEECSCSHHHHHHHTTSCCSEEEEESSSSSCCHHHHHHHHHHTTTCSSEEEEECSSSCHHHHHHHHH-TTCCEEEESCC
T ss_pred EEEEeCCCHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHHHHhCCCcEEEECCCCCHHHHHHHHh-cCCceeeecCc
Confidence 46777788999999999999999998766 3333221110 00001 111111 0111 12111222245
Q ss_pred cChhhhhhhccccCCCCeE---E---EeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhc-ccCeEEEec
Q 015764 118 STPQELQQLQPADGQAENI---V---IDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQ-GLGGIVLKV 190 (401)
Q Consensus 118 ~~~e~~e~~~~~~~~~~~v---v---v~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~-G~DGVvl~~ 190 (401)
.+++|.+.+.........= + .....|. +++..+... +.+..|++-+.+++-...+-+++.. |+||+.+-+
T Consensus 101 ~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g--~~~~~~~~~-~~~~~v~~~IEt~~av~~~~eIa~~~~vd~l~iG~ 177 (256)
T 1dxe_A 101 ETKEEAELAVASTRYPPEGIRGVSVSHRANMFG--TVADYFAQS-NKNITILVQIESQQGVDNVDAIAATEGVDGIFVGP 177 (256)
T ss_dssp CSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGG--TSTTHHHHH-TTSCEEEEEECSHHHHHTHHHHHTSTTCCEEEECH
T ss_pred CCHHHHHHHHHHhcCCCCCccCCCcchhhhhcC--chHHHHHhc-CcccEEEEEECCHHHHHhHHHHhCCCCCCEEEECh
Confidence 5666655544433210000 0 0001122 122332222 2356899999999999988898875 999999988
Q ss_pred CCHH
Q 015764 191 EDVK 194 (401)
Q Consensus 191 ~d~~ 194 (401)
.|..
T Consensus 178 ~DL~ 181 (256)
T 1dxe_A 178 SDLA 181 (256)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 18
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=83.30 E-value=4 Score=38.99 Aligned_cols=112 Identities=13% Similarity=0.139 Sum_probs=69.5
Q ss_pred eCchhHhHHHHHhCCcEEEEcCc-chhhH-hhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhh--hccccCC
Q 015764 57 TESKQVMTAAVERGWNTFVFLSE-NQQLA-IDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQ--LQPADGQ 132 (401)
Q Consensus 57 ~~~K~~vt~AlEsG~~~~v~~~~-~~~~~-~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~--~~~~~~~ 132 (401)
..+.+++.++.+.|.-+++.... +.+.. +.+..+... .++++++-+-+.++...+. ++.. .+
T Consensus 37 vs~~~la~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~-------------~~~p~gVnl~~~~~~~~~~~~~~~~-~g 102 (326)
T 3bo9_A 37 AGTPTLAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQK-------------TDKPFGVNIILVSPWADDLVKVCIE-EK 102 (326)
T ss_dssp TSCHHHHHHHHHTTSBEEEECTTCCHHHHHHHHHHHHTT-------------CSSCEEEEEETTSTTHHHHHHHHHH-TT
T ss_pred CCCHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHh-------------cCCCEEEEEeccCCCHHHHHHHHHH-CC
Confidence 35688999999999989986542 22221 122222110 1234444333433322222 2222 36
Q ss_pred CCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEec
Q 015764 133 AENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKV 190 (401)
Q Consensus 133 ~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~ 190 (401)
++.+.+.+.+ | ..++..+...+..++..+.+.++|+.+ .+.|+|+|++..
T Consensus 103 ~d~V~l~~g~----p-~~~~~~l~~~g~~v~~~v~s~~~a~~a---~~~GaD~i~v~g 152 (326)
T 3bo9_A 103 VPVVTFGAGN----P-TKYIRELKENGTKVIPVVASDSLARMV---ERAGADAVIAEG 152 (326)
T ss_dssp CSEEEEESSC----C-HHHHHHHHHTTCEEEEEESSHHHHHHH---HHTTCSCEEEEC
T ss_pred CCEEEECCCC----c-HHHHHHHHHcCCcEEEEcCCHHHHHHH---HHcCCCEEEEEC
Confidence 8889887765 4 456777776778999999999998865 578999999965
No 19
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=82.93 E-value=9.3 Score=35.54 Aligned_cols=90 Identities=18% Similarity=0.232 Sum_probs=51.9
Q ss_pred CCCeeEEEEEecChhhhhhhccccCCCCeEEEeCC---C----CeeeehhhhhhcccC--CCceEEEEcC-CHHHHHHHH
Q 015764 107 GDRRVGSIIEVSTPQELQQLQPADGQAENIVIDLP---D----WQVIPAENIVASFQG--SGKTVFAISK-TPSEAQIFL 176 (401)
Q Consensus 107 ~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vvv~~~---D----W~iIPlENliA~~q~--~~~~l~a~v~-~~~eA~~al 176 (401)
.++.++. .+.+.++...+.. ..+||+.+..- + -....+|.+-...+. .+..++|.-. +.+++ -
T Consensus 134 ~~~~iG~--S~ht~~Ea~~A~~--~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI~~~ni---~ 206 (243)
T 3o63_A 134 PDTLIGR--STHDPDQVAAAAA--GDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGINAQRL---P 206 (243)
T ss_dssp TTCEEEE--EECSHHHHHHHHH--SSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEESSCCTTTH---H
T ss_pred CCCEEEE--eCCCHHHHHHHhh--CCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCCCHHHH---H
Confidence 3566666 5688887665443 36899999431 1 113455544332222 2456777632 44444 4
Q ss_pred HHhhcccCeEEE-----ecCCHH-HHHHHHHhh
Q 015764 177 EALEQGLGGIVL-----KVEDVK-AVLALKEYF 203 (401)
Q Consensus 177 ~~LE~G~DGVvl-----~~~d~~-ev~~l~~~~ 203 (401)
++++.|+|||.+ ..+||. .+++|++.+
T Consensus 207 ~~~~aGa~gvav~sai~~a~dp~~a~~~l~~~~ 239 (243)
T 3o63_A 207 AVLDAGARRIVVVRAITSADDPRAAAEQLRSAL 239 (243)
T ss_dssp HHHHTTCCCEEESHHHHTCSSHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHH
Confidence 567889999997 456774 455555544
No 20
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=80.80 E-value=3.1 Score=40.73 Aligned_cols=91 Identities=19% Similarity=0.205 Sum_probs=64.0
Q ss_pred eeEEEEEecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhh---cccCCC---ceEEEEcCCHHHHHHHHHHhhccc
Q 015764 110 RVGSIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVA---SFQGSG---KTVFAISKTPSEAQIFLEALEQGL 183 (401)
Q Consensus 110 ~v~~~~~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA---~~q~~~---~~l~a~v~~~~eA~~al~~LE~G~ 183 (401)
.++.+..+.+++..+.++.. ..|+++++..|. ....|.+.. +++..+ ..++..+++.+.. ....+|+.|+
T Consensus 43 ~ig~~l~i~~p~~~e~a~~~--GaD~vilDlEha-~~~~e~~~~~l~a~~~~~~~~~~~~VRv~~~~~~-di~~~LdaGa 118 (339)
T 1izc_A 43 LMGVAHGIPSTFVTKVLAAT--KPDFVWIDVEHG-MFNRLELHDAIHAAQHHSEGRSLVIVRVPKHDEV-SLSTALDAGA 118 (339)
T ss_dssp EEEEEECSCCHHHHHHHHHT--CCSEEEEETTTS-CCCHHHHHHHHHHHHHHTTTCSEEEEECCTTCHH-HHHHHHHHTC
T ss_pred EEEEEEECCCHHHHHHHHhC--CCCEEEEECCCC-CCcHHHHHHHHHHhhhcCCCCCeEEEEeCCCCHH-HHHHHHhCCC
Confidence 46777788888887776543 589999988873 345555433 332112 5688888877654 3466788999
Q ss_pred CeEEEe-cCCHHHHHHHHHhhc
Q 015764 184 GGIVLK-VEDVKAVLALKEYFD 204 (401)
Q Consensus 184 DGVvl~-~~d~~ev~~l~~~~~ 204 (401)
+||+++ .+++++++++++++.
T Consensus 119 ~gImlP~V~saee~~~~~~~~~ 140 (339)
T 1izc_A 119 AGIVIPHVETVEEVREFVKEMY 140 (339)
T ss_dssp SEEEETTCCCHHHHHHHHHHHS
T ss_pred CEEEeCCCCCHHHHHHHHHHhc
Confidence 999985 456899998888764
No 21
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=80.35 E-value=2.3 Score=41.85 Aligned_cols=41 Identities=20% Similarity=0.104 Sum_probs=35.7
Q ss_pred ceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHHhh
Q 015764 160 KTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYF 203 (401)
Q Consensus 160 ~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l~~~~ 203 (401)
.+|..+|.|.+||+. +++.|+|+|.|++-+++++++..+.+
T Consensus 232 ~kIeVEVdtldea~e---Al~aGaD~I~LDn~~~~~l~~av~~l 272 (320)
T 3paj_A 232 KPVEVETETLAELEE---AISAGADIIMLDNFSLEMMREAVKIN 272 (320)
T ss_dssp SCEEEEESSHHHHHH---HHHTTCSEEEEESCCHHHHHHHHHHH
T ss_pred CeEEEEECCHHHHHH---HHHcCCCEEEECCCCHHHHHHHHHHh
Confidence 579999999999875 55679999999999999998888776
No 22
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=79.26 E-value=7.2 Score=35.78 Aligned_cols=107 Identities=14% Similarity=0.094 Sum_probs=60.3
Q ss_pred hhHhHHHHHhCCcEEEEcCc-------chhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCC
Q 015764 60 KQVMTAAVERGWNTFVFLSE-------NQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQ 132 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~-------~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~ 132 (401)
.+.+..+++.|+|.+++... -.++.+...+. |.. ..+.+.+.++.+.+.. ..
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~-----------------g~~--v~~~v~t~eea~~a~~--~G 149 (232)
T 3igs_A 91 LDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHH-----------------HLL--TMADCSSVDDGLACQR--LG 149 (232)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT-----------------TCE--EEEECCSHHHHHHHHH--TT
T ss_pred HHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHC-----------------CCE--EEEeCCCHHHHHHHHh--CC
Confidence 44578899999998876431 12333322222 333 3347888887655443 35
Q ss_pred CCeEEEeCCCCe-----eeehhhhhhcccCCCceEEEE--cCCHHHHHHHHHHhhcccCeEEEec
Q 015764 133 AENIVIDLPDWQ-----VIPAENIVASFQGSGKTVFAI--SKTPSEAQIFLEALEQGLGGIVLKV 190 (401)
Q Consensus 133 ~~~vvv~~~DW~-----iIPlENliA~~q~~~~~l~a~--v~~~~eA~~al~~LE~G~DGVvl~~ 190 (401)
++++.+...+.+ --|--+++.++...+..+++. +++.++++.++ +.|+|||++-+
T Consensus 150 ad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~~ipvIA~GGI~t~~d~~~~~---~~GadgV~VGs 211 (232)
T 3igs_A 150 ADIIGTTMSGYTTPDTPEEPDLPLVKALHDAGCRVIAEGRYNSPALAAEAI---RYGAWAVTVGS 211 (232)
T ss_dssp CSEEECTTTTSSSSSCCSSCCHHHHHHHHHTTCCEEEESCCCSHHHHHHHH---HTTCSEEEECH
T ss_pred CCEEEEcCccCCCCCCCCCCCHHHHHHHHhcCCcEEEECCCCCHHHHHHHH---HcCCCEEEEeh
Confidence 788865322111 112112333332224567766 45788887665 56999999864
No 23
>2k1g_A Lipoprotein SPR; solution structure, bacterial lipoprotein, cysteine PEPT NPLC/P60 family, construct optimized, membrane, palmitate; NMR {Escherichia coli}
Probab=79.13 E-value=0.85 Score=39.39 Aligned_cols=31 Identities=39% Similarity=0.634 Sum_probs=27.4
Q ss_pred CceeeeeecCCCCEEEEEecCCCcccceeee
Q 015764 365 EKAIPVTSLKVGDEVLLRVQGAARHTGIEIQ 395 (401)
Q Consensus 365 g~~vsVt~LK~GD~VL~~~~~~gRHfG~~I~ 395 (401)
+++|+..+|||||-|.-+-.....|+||-+.
T Consensus 60 g~~V~~~~l~pGDLvFf~~~~~~~HVGIyiG 90 (135)
T 2k1g_A 60 GKSVSRSNLRTGDLVLFRAGSTGRHVGIYIG 90 (135)
T ss_dssp SEEECGGGCCTTEEEEEEETTTEEEEEEEEE
T ss_pred CcEecHHHccCCcEEEECCCCCCeEEEEEec
Confidence 6889999999999999887777789999884
No 24
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=78.66 E-value=1.9 Score=44.40 Aligned_cols=135 Identities=12% Similarity=0.097 Sum_probs=89.1
Q ss_pred CchhHhH--HHHHhCCcEEEEcC-cchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCC
Q 015764 58 ESKQVMT--AAVERGWNTFVFLS-ENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAE 134 (401)
Q Consensus 58 ~~K~~vt--~AlEsG~~~~v~~~-~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~ 134 (401)
+|++.+. .|+|.|+|.+.++. .+++.+.++.++ +.+.|..+..+.+|.+++-++.+..-....|
T Consensus 182 kD~~dl~~~~~~~~~vD~Ia~SfVr~a~Dv~~~r~~-------------l~~~g~~~~iiaKIE~~eav~nldeIl~~sD 248 (461)
T 3qtg_A 182 EDVEALKAISPIRDNIDYVAISLAKSCKDVDSVRSL-------------LTELGFQSQVAVKIETKGAVNNLEELVQCSD 248 (461)
T ss_dssp HHHHHHHHHGGGGGGCCEEEECSCCSHHHHHHHHHH-------------HHHTTCCCEEEEEECSHHHHHTHHHHHHTCS
T ss_pred HHHHHHHHHHHhhcCCCEEEecCCCCHHHHHHHHHH-------------HHhcCCCceEEEEECCHHHHHhHHHHHHhcc
Confidence 4688888 89999999888874 334455444432 3333455778889999999888777666678
Q ss_pred eEEEeCCCCe-eeehhhh-------hhcccCCCceEEE-----------EcCCHHHHHHHHHHhhcccCeEEEecCC---
Q 015764 135 NIVIDLPDWQ-VIPAENI-------VASFQGSGKTVFA-----------ISKTPSEAQIFLEALEQGLGGIVLKVED--- 192 (401)
Q Consensus 135 ~vvv~~~DW~-iIPlENl-------iA~~q~~~~~l~a-----------~v~~~~eA~~al~~LE~G~DGVvl~~~d--- 192 (401)
-++|-..|-- =||+|.+ |.+....+.-++. ...+-.|+--...+.--|+|+|+|..+.
T Consensus 249 gImVaRGDLgvei~~e~v~~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAV~dGaDavMLSgETA~G 328 (461)
T 3qtg_A 249 YVVVARGDLGLHYGLDALPIVQRRIVHTSLKYGKPIAVATQLLDSMQSSPIPTRAEINDVFTTASMGVDSLWLTNETASG 328 (461)
T ss_dssp EEEEEHHHHTTTSCTTTHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHTTCSEEEECHHHHTS
T ss_pred cEEEccccccccCCHHHHHHHHHHHHHHHHHhCCCEEEeccchHhhccCCCccHHHHHHHHHHHHhCCcEEEEcccccCC
Confidence 8888543322 2466654 3333223333443 1345688888899999999999998432
Q ss_pred ---HHHHHHHHHhhcc
Q 015764 193 ---VKAVLALKEYFDG 205 (401)
Q Consensus 193 ---~~ev~~l~~~~~~ 205 (401)
.+.|+-+.+++.+
T Consensus 329 ~yPveaV~~m~~I~~~ 344 (461)
T 3qtg_A 329 KYPLAAVSWLSRILMN 344 (461)
T ss_dssp SCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHH
Confidence 3666666777643
No 25
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=77.97 E-value=1.9 Score=40.92 Aligned_cols=114 Identities=12% Similarity=0.122 Sum_probs=59.9
Q ss_pred hhHhHHHHHhCCcEEEEcCcchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEe-cChhhhhhhccccCCCCeEEE
Q 015764 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEV-STPQELQQLQPADGQAENIVI 138 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v-~~~e~~e~~~~~~~~~~~vvv 138 (401)
...+..+.|+|+|+++++.-..+...++... .++.|.....++.- ++.+.++.++.... +++-+
T Consensus 113 e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~-------------~~~~gl~~i~liaP~t~~eri~~i~~~~~--gfvY~ 177 (267)
T 3vnd_A 113 DEFYTKAQAAGVDSVLIADVPVEESAPFSKA-------------AKAHGIAPIFIAPPNADADTLKMVSEQGE--GYTYL 177 (267)
T ss_dssp HHHHHHHHHHTCCEEEETTSCGGGCHHHHHH-------------HHHTTCEEECEECTTCCHHHHHHHHHHCC--SCEEE
T ss_pred HHHHHHHHHcCCCEEEeCCCCHhhHHHHHHH-------------HHHcCCeEEEEECCCCCHHHHHHHHHhCC--CcEEE
Confidence 5678999999999999986433322222222 12223332222222 34455565555432 23333
Q ss_pred -eC---C--CCeee-ehhhhhhcccCCCc-eEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 139 -DL---P--DWQVI-PAENIVASFQGSGK-TVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 139 -~~---~--DW~iI-PlENliA~~q~~~~-~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
.. + .-.+. ++.++++++..... .|+. .++++++|+ ..++.|+|||++-+.
T Consensus 178 vS~~GvTG~~~~~~~~~~~~v~~vr~~~~~pv~vGfGI~~~e~~~---~~~~~gADgvVVGSa 237 (267)
T 3vnd_A 178 LSRAGVTGTESKAGEPIENILTQLAEFNAPPPLLGFGIAEPEQVR---AAIKAGAAGAISGSA 237 (267)
T ss_dssp SCCCCCC--------CHHHHHHHHHTTTCCCEEECSSCCSHHHHH---HHHHTTCSEEEECHH
T ss_pred EecCCCCCCccCCcHHHHHHHHHHHHhcCCCEEEECCcCCHHHHH---HHHHcCCCEEEECHH
Confidence 11 1 11122 36677887654422 2332 345666665 456789999999763
No 26
>1dfa_A PI-SCEI endonuclease; intein, homing endonuclease, hydrolase; 2.00A {Saccharomyces cerevisiae} SCOP: b.86.1.2 d.95.2.2 d.95.2.2 PDB: 1lws_A 1lwt_A 1vde_A 1ef0_A 1um2_A 1jva_A
Probab=77.76 E-value=0.64 Score=46.61 Aligned_cols=90 Identities=16% Similarity=0.138 Sum_probs=56.9
Q ss_pred ceeEEEecCCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEEeccceeEEEEEec--CC---------CCeEEEEEeEe
Q 015764 280 VHAYVLVPGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEAKTN--SG---------DQTLYGIILQN 348 (401)
Q Consensus 280 VHaYv~~pggkT~YLSEL~sG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLVeAe~~--~~---------~G~~~sviLQn 348 (401)
-...|+|++|..+=+.||+.||+||.. ||+.|.+ ++-+ --.+||.-|+-+.+ .+ +|. -+-=+
T Consensus 4 ~~T~V~~~dG~~k~I~~i~~Gd~v~~~--dg~~~~v-~~~~-~g~~~~y~v~~~~~~~~~~~~~~~~~~~g~---~i~~t 76 (454)
T 1dfa_A 4 KGTNVLMADGSIECIENIEVGNKVMGK--DGRPREV-IKLP-RGRETMYSVVQKSQHRAHKSDSSREVPELL---KFTCN 76 (454)
T ss_dssp TTCEEEBTTSCEEEGGGCCTTCCBBCT--TSCBCCB-CCCC-CEEEEEEEEEECCSSCCCSCSCTTSCCCCS---EEEEE
T ss_pred CCCeEEeCCCCeeEehhcccCCEEECC--CCCceEE-EEee-eccceeEEEEecccccccccccccccCCCc---EEEEC
Confidence 346789999999999999999998764 5665543 2322 24568888877631 00 244 34445
Q ss_pred cceEEEecCCCCCCCCCceeeeeecCCCCEEEE
Q 015764 349 AETVALVSPCKGTGEQEKAIPVTSLKVGDEVLL 381 (401)
Q Consensus 349 AETIRLv~p~~g~~~~g~~vsVt~LK~GD~VL~ 381 (401)
++|.=++...+ +..+...+||+||-+-+
T Consensus 77 ~~H~~~~~~~~-----~~~~~~~~l~~gd~~~v 104 (454)
T 1dfa_A 77 ATHELVVRTPR-----SVRRLSRTIKGVEYFEV 104 (454)
T ss_dssp TTCEEEEEEEC-----EEESSSSSCCCSSCCCC
T ss_pred CCCeEEeecCC-----cceeeccccCCCceeeE
Confidence 66655553221 34456678888886643
No 27
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=77.55 E-value=4.4 Score=35.21 Aligned_cols=121 Identities=18% Similarity=0.132 Sum_probs=70.7
Q ss_pred hhHhHHHHHhCCcEEEEcCcchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEEe
Q 015764 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVID 139 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vvv~ 139 (401)
.+++..+.+.|++.+-+.-+.....+.+..+....| +++.++. ..+.++++.+.+.. ..+|++ +
T Consensus 25 ~~~~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~-----------~~~~ig~-~~v~~~~~~~~a~~--~Gad~i-v- 88 (205)
T 1wa3_A 25 KEKALAVFEGGVHLIEITFTVPDADTVIKELSFLKE-----------KGAIIGA-GTVTSVEQCRKAVE--SGAEFI-V- 88 (205)
T ss_dssp HHHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHH-----------TTCEEEE-ESCCSHHHHHHHHH--HTCSEE-E-
T ss_pred HHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCC-----------CCcEEEe-cccCCHHHHHHHHH--cCCCEE-E-
Confidence 567788888899988664332111111222211101 1233332 13567877555443 368888 4
Q ss_pred CCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHHhh
Q 015764 140 LPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYF 203 (401)
Q Consensus 140 ~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l~~~~ 203 (401)
...|. .+++...+..+..++..+.+.+|++. +++.|+|.|-+.+..+..+..++++.
T Consensus 89 ~~~~~----~~~~~~~~~~g~~vi~g~~t~~e~~~---a~~~Gad~vk~~~~~~~g~~~~~~l~ 145 (205)
T 1wa3_A 89 SPHLD----EEISQFCKEKGVFYMPGVMTPTELVK---AMKLGHTILKLFPGEVVGPQFVKAMK 145 (205)
T ss_dssp CSSCC----HHHHHHHHHHTCEEECEECSHHHHHH---HHHTTCCEEEETTHHHHHHHHHHHHH
T ss_pred cCCCC----HHHHHHHHHcCCcEECCcCCHHHHHH---HHHcCCCEEEEcCccccCHHHHHHHH
Confidence 33333 45666666667789999989998765 57999999988775444444444443
No 28
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=77.30 E-value=3.7 Score=42.24 Aligned_cols=37 Identities=22% Similarity=0.282 Sum_probs=30.8
Q ss_pred CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHH
Q 015764 157 GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVK 194 (401)
Q Consensus 157 ~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ 194 (401)
+.+..|++...+++-.+-+-++++. +|||++.+.|.+
T Consensus 212 ~~~i~IiakIEt~eav~nldeI~~~-sDgImVargDLg 248 (470)
T 1e0t_A 212 GENIHIISKIENQEGLNNFDEILEA-SDGIMVARGDLG 248 (470)
T ss_dssp CTTCEEEEEECSHHHHHTHHHHHHH-SSEEEEEHHHHH
T ss_pred CCCceEEEEECCHHHHHhHHHHHHH-CCEEEECchHhh
Confidence 3457899999999888888888887 999999998764
No 29
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=76.95 E-value=12 Score=33.67 Aligned_cols=114 Identities=11% Similarity=0.114 Sum_probs=60.1
Q ss_pred chhHhHHHHHhCCcEEEEcCcc---------hhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccc
Q 015764 59 SKQVMTAAVERGWNTFVFLSEN---------QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPA 129 (401)
Q Consensus 59 ~K~~vt~AlEsG~~~~v~~~~~---------~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~ 129 (401)
-.+++..+.+.|++.+.+...+ .+..+++.+-.. -|+.+.+ -+.++++++.+..
T Consensus 32 ~~~~a~~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~~~~-iPvi~~g---------------gi~~~~~i~~~~~- 94 (266)
T 2w6r_A 32 LRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTT-LPIIASG---------------GAGKMEHFLEAFL- 94 (266)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTTSSCSSCCCHHHHHHHGGGCC-SCEEEES---------------CCCSTHHHHHHHH-
T ss_pred HHHHHHHHHHCCCCEEEEEecCcccCCCcccHHHHHHHHHhcC-CCEEEEC---------------CCCCHHHHHHHHH-
Confidence 4678889999999998875422 122222222111 1333322 2677788776553
Q ss_pred cCCCCeEEEeCCCC-eeeehhhhhhcccCCC---ceEEEEcCC-------------------HHHHHHHHHHhhcccCeE
Q 015764 130 DGQAENIVIDLPDW-QVIPAENIVASFQGSG---KTVFAISKT-------------------PSEAQIFLEALEQGLGGI 186 (401)
Q Consensus 130 ~~~~~~vvv~~~DW-~iIPlENliA~~q~~~---~~l~a~v~~-------------------~~eA~~al~~LE~G~DGV 186 (401)
. .++.+++-...- ..|+++.+...++..+ .+++..+.. ....+.+..+.+.|++.|
T Consensus 95 ~-Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i 173 (266)
T 2w6r_A 95 A-GADKALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEKRGAGEI 173 (266)
T ss_dssp H-TCSEEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEE
T ss_pred c-CCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHHcCCCEE
Confidence 2 578888866665 4556565555433322 233222221 122344556678999999
Q ss_pred EEec
Q 015764 187 VLKV 190 (401)
Q Consensus 187 vl~~ 190 (401)
++..
T Consensus 174 ~~t~ 177 (266)
T 2w6r_A 174 LLTS 177 (266)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9864
No 30
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=76.59 E-value=5.3 Score=35.94 Aligned_cols=111 Identities=14% Similarity=0.172 Sum_probs=61.3
Q ss_pred eeeEEEEEEEEEcCCcc-eEEEeecC-----CCCCCceEEEeccCceEEEEeeccccCCCC-CCCCeeeecCCceeEEEe
Q 015764 214 SLMKATVTRVDVAGMGD-RVCVDLCS-----LMRPGEGLLVGSFARGLFLVHSECLESNYI-ASRPFRVNAGPVHAYVLV 286 (401)
Q Consensus 214 ~L~~atVt~V~~vGmGD-RVCVDtcs-----ll~~GEGmLVGS~s~glFLVhsEt~es~Yv-a~RPFRVNAGaVHaYv~~ 286 (401)
...+++|++++.+.-.- ++.+..-. -+.||+=+.|--. ...+....||. ++-|- +.|-++=.|..
T Consensus 15 ~~~~~~V~~~~~~~~~~~~~~l~~~~~~~~~~~~pGQ~v~l~~~------~~g~~~~R~ySi~s~~~--~~~~~~l~vk~ 86 (275)
T 1umk_A 15 IKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSAR------IDGNLVVRPYTPISSDD--DKGFVDLVIKV 86 (275)
T ss_dssp CCEEEEEEEEEECSSSEEEEEEECSSTTCBCCCCTTCEEEEEEE------ETTEEEEEEECCSSCTT--CCSEEEEEEEC
T ss_pred ccEEEEEEEEEEcCCCeEEEEEEcCCcccccCCCCCcEEEEEEe------eCCcEEEeccccCCccC--CCCeEEEEEEE
Confidence 45688999999886532 23444221 2345543332210 01111223442 22221 33555556665
Q ss_pred c-----------CCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEE-----------eccceeEEEE
Q 015764 287 P-----------GGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKI-----------ESRPLILVEA 332 (401)
Q Consensus 287 p-----------ggkT~YLSEL~sG~eVLvVd~~G~tR~~~VGRvKI-----------E~RPLlLVeA 332 (401)
- |.-|+||.+|+.||+|.+-...|+...-.=|.-.+ ..+|++||=+
T Consensus 87 ~~~~~~~~~~~~G~~S~~L~~l~~Gd~v~v~gP~G~~~~~~~~~f~l~~~~~~~~~~~~~~~~vliag 154 (275)
T 1umk_A 87 YFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAG 154 (275)
T ss_dssp CCSSSBTTBTTCCHHHHHHHHCCTTCEEEEEEEECSEEEEETTEEEECSSTTSCCEEEECSEEEEEEE
T ss_pred eccCcccccCCCChhHHHHhcCCCCCEEEEEcCccceEecCCccccccccccccccccCCceEEEEec
Confidence 3 66799999999999999988888753211111111 4678888855
No 31
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=76.40 E-value=13 Score=29.01 Aligned_cols=81 Identities=12% Similarity=0.052 Sum_probs=46.3
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccCC-CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHH
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGS-GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVK 194 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~~-~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ 194 (401)
...+.++.-.... ....+.++++..-.. ..--.++..+... ...++...... +...+..+++.|+++++.+|-+++
T Consensus 33 ~~~~~~~al~~~~-~~~~dlvllD~~l~~-~~g~~l~~~l~~~~~~~ii~ls~~~-~~~~~~~~~~~ga~~~l~KP~~~~ 109 (136)
T 2qzj_A 33 LAYNCEEAIGKIF-SNKYDLIFLEIILSD-GDGWTLCKKIRNVTTCPIVYMTYIN-EDQSILNALNSGGDDYLIKPLNLE 109 (136)
T ss_dssp EESSHHHHHHHHH-HCCCSEEEEESEETT-EEHHHHHHHHHTTCCCCEEEEESCC-CHHHHHHHHHTTCCEEEESSCCHH
T ss_pred EECCHHHHHHHHH-hcCCCEEEEeCCCCC-CCHHHHHHHHccCCCCCEEEEEcCC-CHHHHHHHHHcCCcEEEECCCCHH
Confidence 4556554333222 234677887432111 1222344444332 34565554443 345667889999999999999998
Q ss_pred HHHHH
Q 015764 195 AVLAL 199 (401)
Q Consensus 195 ev~~l 199 (401)
++.+.
T Consensus 110 ~L~~~ 114 (136)
T 2qzj_A 110 ILYAK 114 (136)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87654
No 32
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=76.26 E-value=9.6 Score=29.37 Aligned_cols=83 Identities=18% Similarity=0.201 Sum_probs=47.9
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC--CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG--SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~--~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (401)
...+.++....... ...+.++++..-.. ..--.++..+.. ....++..... .+......+++.|+++++.+|-++
T Consensus 36 ~~~~~~~a~~~l~~-~~~dlvi~d~~l~~-~~g~~~~~~l~~~~~~~~ii~~s~~-~~~~~~~~~~~~g~~~~l~kP~~~ 112 (137)
T 3hdg_A 36 SAGDGEEGERLFGL-HAPDVIITDIRMPK-LGGLEMLDRIKAGGAKPYVIVISAF-SEMKYFIKAIELGVHLFLPKPIEP 112 (137)
T ss_dssp EESSHHHHHHHHHH-HCCSEEEECSSCSS-SCHHHHHHHHHHTTCCCEEEECCCC-CCHHHHHHHHHHCCSEECCSSCCH
T ss_pred EECCHHHHHHHHhc-cCCCEEEEeCCCCC-CCHHHHHHHHHhcCCCCcEEEEecC-cChHHHHHHHhCCcceeEcCCCCH
Confidence 35566554333322 25677888543211 122233333332 23455555444 445567788999999999999999
Q ss_pred HHHHHHHH
Q 015764 194 KAVLALKE 201 (401)
Q Consensus 194 ~ev~~l~~ 201 (401)
+++.+.-+
T Consensus 113 ~~l~~~i~ 120 (137)
T 3hdg_A 113 GRLMETLE 120 (137)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88765433
No 33
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=76.04 E-value=8.4 Score=36.01 Aligned_cols=91 Identities=15% Similarity=0.106 Sum_probs=65.8
Q ss_pred eeEEEEEecChhhhhhhccccCCCCeEEEeCCCCeeee--------hhhhhhcccC-----CCceEEEEcCCHH---HHH
Q 015764 110 RVGSIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIP--------AENIVASFQG-----SGKTVFAISKTPS---EAQ 173 (401)
Q Consensus 110 ~v~~~~~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIP--------lENliA~~q~-----~~~~l~a~v~~~~---eA~ 173 (401)
+...|+...+++.++.+.. ..+|.++++..| .+.| .+|+.+.++. .+..++..++..+ ...
T Consensus 9 rs~L~~p~~~~~~~~~a~~--~gaD~vilDlEd-av~~~~~~k~~Ar~~v~~~l~~~~~~~~~~~~~VRv~~~~~~~~~~ 85 (284)
T 1sgj_A 9 RSVLFAPGNRADLIAKLPR--SAPDAVVIDLED-AVPGTAEAKAAARPVAHDAARDLIAAAPHLAVFVRVNALHSPYFED 85 (284)
T ss_dssp SEEEEEETTCHHHHHHTTT--TCCSEEEEESST-TSCSSHHHHHHHHHHHHHHHHHHHHHSTTSEEEEECCCTTSTTHHH
T ss_pred ceEEEccCCCHHHHHHHHh--CCCCEEEEECCC-CCCCchhhHHHHHHHHHHHHHhcccccCCCeEEEEeCCCCCHhHHH
Confidence 4567788889988777653 368999999888 4666 6788776653 2357888888644 233
Q ss_pred HHHHHhhcccCeEEEec-CCHHHHHHHHHhhc
Q 015764 174 IFLEALEQGLGGIVLKV-EDVKAVLALKEYFD 204 (401)
Q Consensus 174 ~al~~LE~G~DGVvl~~-~d~~ev~~l~~~~~ 204 (401)
-...+|+ |+|||+|+- +++++++++.+++.
T Consensus 86 dl~~~l~-g~~~i~lPkv~s~~~v~~~~~~l~ 116 (284)
T 1sgj_A 86 DLSVLTP-ELSGVVVPKLEMGAEARQVAQMLQ 116 (284)
T ss_dssp HGGGCCT-TSSEEEECSCCSHHHHHHHHHHHH
T ss_pred HHHHHhc-cCCEEEeCCCCCHHHHHHHHHHHH
Confidence 4455667 999999964 46899988888774
No 34
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=75.99 E-value=27 Score=31.92 Aligned_cols=113 Identities=13% Similarity=0.060 Sum_probs=67.2
Q ss_pred hhHhHHHHHhCCcEEEEcCcchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEec-ChhhhhhhccccCCCCeEEE
Q 015764 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVS-TPQELQQLQPADGQAENIVI 138 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~-~~e~~e~~~~~~~~~~~vvv 138 (401)
.++..++.+.|+.++.+.. .+..++..+..-+ |++-...+... |..+ -|+ +.++.+++. ...+|.+++
T Consensus 39 ~~~A~a~~~~Ga~~i~~~~--~~~i~~ir~~v~~-Pvig~~k~d~~--~~~~----~I~~~~~~i~~~~--~~Gad~V~l 107 (232)
T 3igs_A 39 AAMALAAEQAGAVAVRIEG--IDNLRMTRSLVSV-PIIGIIKRDLD--ESPV----RITPFLDDVDALA--QAGAAIIAV 107 (232)
T ss_dssp HHHHHHHHHTTCSEEEEES--HHHHHHHHTTCCS-CEEEECBCCCS--SCCC----CBSCSHHHHHHHH--HHTCSEEEE
T ss_pred HHHHHHHHHCCCeEEEECC--HHHHHHHHHhcCC-CEEEEEeecCC--Ccce----EeCccHHHHHHHH--HcCCCEEEE
Confidence 6778888899999988853 3333333332111 22200000000 1000 122 334544432 236888988
Q ss_pred eCC---CCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEE
Q 015764 139 DLP---DWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVL 188 (401)
Q Consensus 139 ~~~---DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl 188 (401)
... +. -.++.++..+...+-.+++.+.+.+||+.+ ++.|+|.|..
T Consensus 108 ~~~~~~~p--~~l~~~i~~~~~~g~~v~~~v~t~eea~~a---~~~Gad~Ig~ 155 (232)
T 3igs_A 108 DGTARQRP--VAVEALLARIHHHHLLTMADCSSVDDGLAC---QRLGADIIGT 155 (232)
T ss_dssp ECCSSCCS--SCHHHHHHHHHHTTCEEEEECCSHHHHHHH---HHTTCSEEEC
T ss_pred CccccCCH--HHHHHHHHHHHHCCCEEEEeCCCHHHHHHH---HhCCCCEEEE
Confidence 764 23 357788888877677899999999999754 5789999863
No 35
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=75.87 E-value=5.7 Score=40.45 Aligned_cols=118 Identities=12% Similarity=0.083 Sum_probs=71.0
Q ss_pred EeCchhHhHHHHHhCCcEEEEcCcch---hhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCC
Q 015764 56 WTESKQVMTAAVERGWNTFVFLSENQ---QLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQ 132 (401)
Q Consensus 56 w~~~K~~vt~AlEsG~~~~v~~~~~~---~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~ 132 (401)
+.+..+.+.++++.|+|.+.+...+. ...+.+..+....| +.++.. ..+.+.++...+.. ..
T Consensus 229 ~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p------------~~~Vi~-g~v~t~e~a~~l~~--aG 293 (496)
T 4fxs_A 229 APGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYP------------HLEIIG-GNVATAEGARALIE--AG 293 (496)
T ss_dssp SSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCT------------TCCEEE-EEECSHHHHHHHHH--HT
T ss_pred ccchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCC------------CceEEE-cccCcHHHHHHHHH--hC
Confidence 55678999999999999998875432 11111111211000 222222 45788887655543 36
Q ss_pred CCeEEEeCC--------------CCeeeehhhhhhcccCCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 133 AENIVIDLP--------------DWQVIPAENIVASFQGSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 133 ~~~vvv~~~--------------DW~iIPlENliA~~q~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
+|.+++... .++.-.+.++..++...+..|+| .+.+.+|+..++ +.|+|+|++-+-
T Consensus 294 aD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kal---a~GAd~V~iGs~ 365 (496)
T 4fxs_A 294 VSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAI---AAGASCVMVGSM 365 (496)
T ss_dssp CSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHH---HTTCSEEEESTT
T ss_pred CCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHH---HcCCCeEEecHH
Confidence 888887411 12222334555544444567888 689999988765 569999998764
No 36
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=75.43 E-value=10 Score=38.54 Aligned_cols=115 Identities=14% Similarity=0.161 Sum_probs=70.7
Q ss_pred EeCchhHhHHHHHhCCcEEEEcCcc---h---hhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccc
Q 015764 56 WTESKQVMTAAVERGWNTFVFLSEN---Q---QLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPA 129 (401)
Q Consensus 56 w~~~K~~vt~AlEsG~~~~v~~~~~---~---~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~ 129 (401)
+.+..+.+..++|.|+|.+.+...+ . +.++++.+. .| +.++.. ..+.+.++...+..
T Consensus 227 ~~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~---~p------------~~~Vi~-g~v~t~e~a~~l~~- 289 (490)
T 4avf_A 227 GADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQT---FP------------DVQVIG-GNIATAEAAKALAE- 289 (490)
T ss_dssp STTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHH---CT------------TSEEEE-EEECSHHHHHHHHH-
T ss_pred ccchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHH---CC------------CceEEE-eeeCcHHHHHHHHH-
Confidence 3456889999999999998886432 1 222222221 00 222222 35788887555443
Q ss_pred cCCCCeEEEeCC-----------CCe---eeehhhhhhcccCCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 130 DGQAENIVIDLP-----------DWQ---VIPAENIVASFQGSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 130 ~~~~~~vvv~~~-----------DW~---iIPlENliA~~q~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
..+|.+++-.. +|. +--+.++..++...+..||| .+.+.+|+..++. .|+|+|++-+-
T Consensus 290 -aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~---~GAd~V~vGs~ 363 (490)
T 4avf_A 290 -AGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMV---AGAYCVMMGSM 363 (490)
T ss_dssp -TTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHH---HTCSEEEECTT
T ss_pred -cCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHH---cCCCeeeecHH
Confidence 36899988321 222 22234455544444667898 7899999887764 59999998764
No 37
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=75.38 E-value=17 Score=28.71 Aligned_cols=81 Identities=16% Similarity=0.194 Sum_probs=47.4
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (401)
...+.++.-.... ....+.++++..-.. ..--.++..+. .....++...... +......+++.|+++++.+|-++
T Consensus 51 ~~~~~~~al~~l~-~~~~dlii~D~~l~~-~~g~~~~~~l~~~~~~~~ii~ls~~~-~~~~~~~~~~~g~~~~l~Kp~~~ 127 (150)
T 4e7p_A 51 QAKNGQEAIQLLE-KESVDIAILDVEMPV-KTGLEVLEWIRSEKLETKVVVVTTFK-RAGYFERAVKAGVDAYVLKERSI 127 (150)
T ss_dssp EESSHHHHHHHHT-TSCCSEEEECSSCSS-SCHHHHHHHHHHTTCSCEEEEEESCC-CHHHHHHHHHTTCSEEEETTSCH
T ss_pred EECCHHHHHHHhh-ccCCCEEEEeCCCCC-CcHHHHHHHHHHhCCCCeEEEEeCCC-CHHHHHHHHHCCCcEEEecCCCH
Confidence 4556655433332 234677887543221 22223333332 2345666665543 44556778999999999999999
Q ss_pred HHHHHH
Q 015764 194 KAVLAL 199 (401)
Q Consensus 194 ~ev~~l 199 (401)
+++.+.
T Consensus 128 ~~l~~~ 133 (150)
T 4e7p_A 128 ADLMQT 133 (150)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877654
No 38
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=75.23 E-value=21 Score=32.61 Aligned_cols=113 Identities=14% Similarity=0.081 Sum_probs=68.1
Q ss_pred hhHhHHHHHhCCcEEEEcCcchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEec-ChhhhhhhccccCCCCeEEE
Q 015764 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVS-TPQELQQLQPADGQAENIVI 138 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~-~~e~~e~~~~~~~~~~~vvv 138 (401)
.++..++.+.|+.++-+.. .+..++..+..-+ |++-...+... |..+ -|+ +.++.+++. ...+|.+++
T Consensus 39 ~~~A~a~~~~Ga~~i~~~~--~~~i~~ir~~v~~-Pvig~~k~~~~--~~~~----~I~~~~~~i~~~~--~aGad~I~l 107 (229)
T 3q58_A 39 AAMAQAAASAGAVAVRIEG--IENLRTVRPHLSV-PIIGIIKRDLT--GSPV----RITPYLQDVDALA--QAGADIIAF 107 (229)
T ss_dssp HHHHHHHHHTTCSEEEEES--HHHHHHHGGGCCS-CEEEECBCCCS--SCCC----CBSCSHHHHHHHH--HHTCSEEEE
T ss_pred HHHHHHHHHCCCcEEEECC--HHHHHHHHHhcCC-CEEEEEeecCC--CCce----EeCccHHHHHHHH--HcCCCEEEE
Confidence 6778888899999998854 3444433332111 32210000000 1000 122 334544433 236888888
Q ss_pred eCC---CCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEE
Q 015764 139 DLP---DWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVL 188 (401)
Q Consensus 139 ~~~---DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl 188 (401)
... +. -.++.++..+...+..+++.+.+.+||+.+ ++.|+|.|..
T Consensus 108 ~~~~~~~p--~~l~~~i~~~~~~g~~v~~~v~t~eea~~a---~~~Gad~Ig~ 155 (229)
T 3q58_A 108 DASFRSRP--VDIDSLLTRIRLHGLLAMADCSTVNEGISC---HQKGIEFIGT 155 (229)
T ss_dssp ECCSSCCS--SCHHHHHHHHHHTTCEEEEECSSHHHHHHH---HHTTCSEEEC
T ss_pred CccccCCh--HHHHHHHHHHHHCCCEEEEecCCHHHHHHH---HhCCCCEEEe
Confidence 764 23 367788888877677899999999999765 5789999964
No 39
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=75.00 E-value=15 Score=28.43 Aligned_cols=82 Identities=10% Similarity=0.102 Sum_probs=47.8
Q ss_pred EecChhhhhhhccc-cCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCC
Q 015764 116 EVSTPQELQQLQPA-DGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192 (401)
Q Consensus 116 ~v~~~e~~e~~~~~-~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d 192 (401)
...+.++....... ....+.++++..-.. ..--.++..+. .....++..... .+......+++.|+++++.+|-+
T Consensus 32 ~~~~~~~a~~~~~~~~~~~dlvi~d~~l~~-~~g~~~~~~l~~~~~~~~ii~ls~~-~~~~~~~~~~~~g~~~~l~kp~~ 109 (143)
T 3jte_A 32 TASSSTEGLRIFTENCNSIDVVITDMKMPK-LSGMDILREIKKITPHMAVIILTGH-GDLDNAILAMKEGAFEYLRKPVT 109 (143)
T ss_dssp EESSHHHHHHHHHHTTTTCCEEEEESCCSS-SCHHHHHHHHHHHCTTCEEEEEECT-TCHHHHHHHHHTTCSEEEESSCC
T ss_pred EeCCHHHHHHHHHhCCCCCCEEEEeCCCCC-CcHHHHHHHHHHhCCCCeEEEEECC-CCHHHHHHHHHhCcceeEeCCCC
Confidence 45565553333322 345788888544221 11222333332 234566655544 44556778899999999999999
Q ss_pred HHHHHHH
Q 015764 193 VKAVLAL 199 (401)
Q Consensus 193 ~~ev~~l 199 (401)
++++.+.
T Consensus 110 ~~~l~~~ 116 (143)
T 3jte_A 110 AQDLSIA 116 (143)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9877654
No 40
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=74.97 E-value=2.9 Score=38.77 Aligned_cols=114 Identities=8% Similarity=0.064 Sum_probs=58.0
Q ss_pred hhHhHHHHHhCCcEEEEcCcchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEe-cChhhhhhhccccCCCCeEEE
Q 015764 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEV-STPQELQQLQPADGQAENIVI 138 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v-~~~e~~e~~~~~~~~~~~vvv 138 (401)
.+.+..+.+.|+|+++++....+...++-+. +++.|.....++.- ++.+.++.++.... +++.+
T Consensus 112 ~~~~~~~~~aGadgii~~d~~~e~~~~~~~~-------------~~~~g~~~i~l~~p~t~~~~i~~i~~~~~--g~v~~ 176 (268)
T 1qop_A 112 DAFYARCEQVGVDSVLVADVPVEESAPFRQA-------------ALRHNIAPIFICPPNADDDLLRQVASYGR--GYTYL 176 (268)
T ss_dssp HHHHHHHHHHTCCEEEETTCCGGGCHHHHHH-------------HHHTTCEEECEECTTCCHHHHHHHHHHCC--SCEEE
T ss_pred HHHHHHHHHcCCCEEEEcCCCHHHHHHHHHH-------------HHHcCCcEEEEECCCCCHHHHHHHHhhCC--CcEEE
Confidence 5788899999999999986533222222111 12223332222222 34455556555432 23333
Q ss_pred eC----CCC---eeeehhhhhhcccCC-CceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 139 DL----PDW---QVIPAENIVASFQGS-GKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 139 ~~----~DW---~iIPlENliA~~q~~-~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
.. ++- ..-++..+|+.+.+. +..|+. .++++++++ .+++.|+|||++-+.
T Consensus 177 ~s~~G~tG~~~~~~~~~~~~i~~lr~~~~~pi~vggGI~t~e~~~---~~~~agAD~vVVGSa 236 (268)
T 1qop_A 177 LSRSGVTGAENRGALPLHHLIEKLKEYHAAPALQGFGISSPEQVS---AAVRAGAAGAISGSA 236 (268)
T ss_dssp ESSSSCCCSSSCC--CCHHHHHHHHHTTCCCEEEESSCCSHHHHH---HHHHTTCSEEEECHH
T ss_pred EecCCcCCCccCCCchHHHHHHHHHhccCCcEEEECCCCCHHHHH---HHHHcCCCEEEEChH
Confidence 21 111 123345566665432 223333 245566555 456889999998653
No 41
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=74.91 E-value=4.5 Score=39.25 Aligned_cols=42 Identities=10% Similarity=-0.101 Sum_probs=35.9
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHHhh
Q 015764 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYF 203 (401)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l~~~~ 203 (401)
..+|..++.|.+||+.+ ++.|+|.|+|+.-+++++++..+.+
T Consensus 198 ~~~IeVEv~tl~ea~eA---l~aGaD~I~LDn~~~~~l~~av~~~ 239 (287)
T 3tqv_A 198 NKVVEVEVTNLDELNQA---IAAKADIVMLDNFSGEDIDIAVSIA 239 (287)
T ss_dssp TSCEEEEESSHHHHHHH---HHTTCSEEEEESCCHHHHHHHHHHH
T ss_pred CCcEEEEeCCHHHHHHH---HHcCCCEEEEcCCCHHHHHHHHHhh
Confidence 45899999999988755 5579999999999999998877766
No 42
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=74.84 E-value=1.7 Score=45.20 Aligned_cols=134 Identities=18% Similarity=0.201 Sum_probs=86.7
Q ss_pred CchhHhHHHHHhCCcEEEEcC-cchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeE
Q 015764 58 ESKQVMTAAVERGWNTFVFLS-ENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENI 136 (401)
Q Consensus 58 ~~K~~vt~AlEsG~~~~v~~~-~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~v 136 (401)
+|++.+..|+|.|+|.+.++. .+++.++++.++ +.+.|+.+..+.+|.+++-++.+..-....|-+
T Consensus 193 kD~~dl~~~~~~~vD~i~~sfVr~a~dv~~~r~~-------------l~~~~~~i~IiaKIE~~eav~nldeIl~~sDgI 259 (499)
T 3hqn_D 193 KDRVDLQFGVEQGVDMIFASFIRSAEQVGDVRKA-------------LGPKGRDIMIICKIENHQGVQNIDSIIEESDGI 259 (499)
T ss_dssp HHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHH-------------HCGGGTTSEEEEEECSHHHHHTHHHHHHHSSEE
T ss_pred HHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHH-------------HHhcCCCCeEEEEECCHHHHHhHHHHHHhCCcE
Confidence 578889999999999988874 234445444433 223345567888999999888776655557888
Q ss_pred EEeCCCCe-eeehhhh-------hhcccCCCceEEE-----------EcCCHHHHHHHHHHhhcccCeEEEecCC-----
Q 015764 137 VIDLPDWQ-VIPAENI-------VASFQGSGKTVFA-----------ISKTPSEAQIFLEALEQGLGGIVLKVED----- 192 (401)
Q Consensus 137 vv~~~DW~-iIPlENl-------iA~~q~~~~~l~a-----------~v~~~~eA~~al~~LE~G~DGVvl~~~d----- 192 (401)
+|-..|-- =||+|.+ |.+....+.-++. ...+-.|+--...+.--|+|+|+|..+.
T Consensus 260 mVaRGDLgvEi~~e~vp~~Qk~iI~~c~~agkpVi~ATQmLeSMi~~p~PTRAEvsDVanaV~dG~DavMLSgETA~G~y 339 (499)
T 3hqn_D 260 MVARGDLGVEIPAEKVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLSGETAKGKY 339 (499)
T ss_dssp EEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTSSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSC
T ss_pred EEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEeehhHHHhccCCCccHHHHHHHHHHHHcCCcEEEEeccccCCCC
Confidence 88544432 2466654 3332222223333 1245688888899999999999996543
Q ss_pred -HHHHHHHHHhhc
Q 015764 193 -VKAVLALKEYFD 204 (401)
Q Consensus 193 -~~ev~~l~~~~~ 204 (401)
.+.|+-+.+++.
T Consensus 340 PveaV~~m~~I~~ 352 (499)
T 3hqn_D 340 PNEVVQYMARICL 352 (499)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 356666666653
No 43
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=74.53 E-value=11 Score=35.16 Aligned_cols=36 Identities=14% Similarity=0.290 Sum_probs=30.3
Q ss_pred CceEEEEcCCHHHHHHHHHHhhc-ccCeEEEecCCHH
Q 015764 159 GKTVFAISKTPSEAQIFLEALEQ-GLGGIVLKVEDVK 194 (401)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~-G~DGVvl~~~d~~ 194 (401)
+..|++-+.+++-...+-+++.. |+||+.+-+.|..
T Consensus 145 ~~~v~~~IEt~~av~~~~eIa~~~gvd~l~iG~~DL~ 181 (267)
T 2vws_A 145 SLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLS 181 (267)
T ss_dssp HCEEEEECCSHHHHHTHHHHHTSTTCCEEEECHHHHH
T ss_pred ccEEEEEECCHHHHHHHHHHhCCCCCCEEEEChHHHH
Confidence 35799999999999888888875 8999999887653
No 44
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=74.52 E-value=2.8 Score=44.14 Aligned_cols=134 Identities=16% Similarity=0.191 Sum_probs=87.0
Q ss_pred CchhHhHHHHHhCCcEEEEcC-cchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeE
Q 015764 58 ESKQVMTAAVERGWNTFVFLS-ENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENI 136 (401)
Q Consensus 58 ~~K~~vt~AlEsG~~~~v~~~-~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~v 136 (401)
.|++.+..|+|.|+|.+.++. .+++.++++.++ +.+.|+.+..+.+|.+++-++.+..-....|-+
T Consensus 243 kD~~dl~f~~~~~vD~ia~SfVr~a~Dv~~~r~~-------------L~~~g~~i~IIAKIE~~eav~nldeIl~~sDgI 309 (550)
T 3gr4_A 243 KDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKV-------------LGEKGKNIKIISKIENHEGVRRFDEILEASDGI 309 (550)
T ss_dssp HHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHH-------------HTTTTTTSEEEEEECSHHHHHTHHHHHHHSSEE
T ss_pred HHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHH-------------HHhcCCCceEEEEeCCHHHHHHHHHHHHhCCEE
Confidence 478889999999999888774 234444444433 334456677888999999888776655557888
Q ss_pred EEeCCCCe-eeehhhh-------hhcccCCCceEEEE-----------cCCHHHHHHHHHHhhcccCeEEEecCC-----
Q 015764 137 VIDLPDWQ-VIPAENI-------VASFQGSGKTVFAI-----------SKTPSEAQIFLEALEQGLGGIVLKVED----- 192 (401)
Q Consensus 137 vv~~~DW~-iIPlENl-------iA~~q~~~~~l~a~-----------v~~~~eA~~al~~LE~G~DGVvl~~~d----- 192 (401)
+|-..|-- =||+|.+ |++....+.-++.. ..+-.|+--.+.+.--|+|+|+|..+.
T Consensus 310 mVaRGDLgvei~~e~vp~~Qk~iI~~c~~agkpVi~ATQMLeSMi~~p~PTRAEvsDVanAvldG~DavMLSgETA~G~y 389 (550)
T 3gr4_A 310 MVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDY 389 (550)
T ss_dssp EEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSTTGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSC
T ss_pred EEccchhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEehhhHHhhcCCCccHHHHHHHHHHHHcCCcEEEEecCccCCCC
Confidence 88543432 2455553 33322222234421 245688888899999999999996543
Q ss_pred -HHHHHHHHHhhc
Q 015764 193 -VKAVLALKEYFD 204 (401)
Q Consensus 193 -~~ev~~l~~~~~ 204 (401)
.+.|+-+.+++.
T Consensus 390 PveaV~~M~~I~~ 402 (550)
T 3gr4_A 390 PLEAVRMQHLIAR 402 (550)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 356666666653
No 45
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=74.36 E-value=8.8 Score=36.47 Aligned_cols=36 Identities=17% Similarity=0.284 Sum_probs=30.7
Q ss_pred CceEEEEcCCHHHHHHHHHHhhc-ccCeEEEecCCHH
Q 015764 159 GKTVFAISKTPSEAQIFLEALEQ-GLGGIVLKVEDVK 194 (401)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~-G~DGVvl~~~d~~ 194 (401)
+..|++-+.+++-...+-+++.. |+||+.+-+.|..
T Consensus 166 ~~~vi~mIEt~~av~n~deIaa~~~vD~l~iG~~DLs 202 (287)
T 2v5j_A 166 QMCVLVQIETREAMKNLPQILDVEGVDGVFIGPADLS 202 (287)
T ss_dssp HCEEEEEECSHHHHHTHHHHHTSTTEEEEEECHHHHH
T ss_pred CcEEEEEECcHHHHHHHHHHhCcCCCCEEEECHHHHH
Confidence 35799999999999999999875 9999999887654
No 46
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=74.06 E-value=4.5 Score=39.59 Aligned_cols=43 Identities=9% Similarity=0.089 Sum_probs=36.4
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHHhhc
Q 015764 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFD 204 (401)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l~~~~~ 204 (401)
..+|..+|.|.+||+.++ +.|+|.|+|+.=+++++++..+.+.
T Consensus 207 ~~kIeVEv~tl~e~~eAl---~aGaDiImLDn~s~~~l~~av~~~~ 249 (300)
T 3l0g_A 207 NEYIAIECDNISQVEESL---SNNVDMILLDNMSISEIKKAVDIVN 249 (300)
T ss_dssp SCCEEEEESSHHHHHHHH---HTTCSEEEEESCCHHHHHHHHHHHT
T ss_pred CCCEEEEECCHHHHHHHH---HcCCCEEEECCCCHHHHHHHHHhhc
Confidence 468999999999987655 5699999999999999988777663
No 47
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=73.68 E-value=12 Score=28.43 Aligned_cols=82 Identities=10% Similarity=0.158 Sum_probs=47.2
Q ss_pred EecChhhhhhhcccc------CCCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCe
Q 015764 116 EVSTPQELQQLQPAD------GQAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGG 185 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~------~~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DG 185 (401)
...+.++.-...... ...+.++++..-.. ..--.++..+.. ....++......+ ......+++.|+++
T Consensus 33 ~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~-~~g~~~~~~l~~~~~~~~~pii~ls~~~~-~~~~~~~~~~g~~~ 110 (140)
T 1k68_A 33 TVRDGMEAMAYLRQEGEYANASRPDLILLXLNLPK-KDGREVLAEIKSDPTLKRIPVVVLSTSIN-EDDIFHSYDLHVNC 110 (140)
T ss_dssp EECSHHHHHHHHTTCGGGGSCCCCSEEEECSSCSS-SCHHHHHHHHHHSTTGGGSCEEEEESCCC-HHHHHHHHHTTCSE
T ss_pred EECCHHHHHHHHHcccccccCCCCcEEEEecCCCc-ccHHHHHHHHHcCcccccccEEEEecCCc-HHHHHHHHHhchhh
Confidence 355665544333321 35677887433211 222234444433 2345666555443 34556788999999
Q ss_pred EEEecCCHHHHHHH
Q 015764 186 IVLKVEDVKAVLAL 199 (401)
Q Consensus 186 Vvl~~~d~~ev~~l 199 (401)
++.+|-+++++.+.
T Consensus 111 ~l~kP~~~~~l~~~ 124 (140)
T 1k68_A 111 YITKSANLSQLFQI 124 (140)
T ss_dssp EEECCSSHHHHHHH
T ss_pred eecCCCCHHHHHHH
Confidence 99999999887654
No 48
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=73.46 E-value=9 Score=35.70 Aligned_cols=122 Identities=20% Similarity=0.104 Sum_probs=76.2
Q ss_pred CchhHhHHHHHhCCcEEEEcCcchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEE
Q 015764 58 ESKQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIV 137 (401)
Q Consensus 58 ~~K~~vt~AlEsG~~~~v~~~~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vv 137 (401)
+-.++..+.++.|++.+=++-.+..-.+.+..+..--| +..+|+ ..|.+.++.+.+... .+++++
T Consensus 26 ~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p------------~~~IGA-GTVlt~~~a~~ai~A--GA~fiv 90 (217)
T 3lab_A 26 HAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAVP------------EAIVGA-GTVCTADDFQKAIDA--GAQFIV 90 (217)
T ss_dssp GHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCT------------TSEEEE-ECCCSHHHHHHHHHH--TCSEEE
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCC------------CCeEee-ccccCHHHHHHHHHc--CCCEEE
Confidence 35778899999999998887433222222222211001 122333 468889987765543 578888
Q ss_pred EeCCCCeeeehhhhhhcccCCCc------eEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH----HHHHHHHHhh
Q 015764 138 IDLPDWQVIPAENIVASFQGSGK------TVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV----KAVLALKEYF 203 (401)
Q Consensus 138 v~~~DW~iIPlENliA~~q~~~~------~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~----~ev~~l~~~~ 203 (401)
.-..+.++| ...+..+. -++..+.|++|+..+ +|.|+|-|=+-|... +-+++++..+
T Consensus 91 sP~~~~evi------~~~~~~~v~~~~~~~~~PG~~TptE~~~A---~~~Gad~vK~FPa~~~gG~~~lkal~~p~ 157 (217)
T 3lab_A 91 SPGLTPELI------EKAKQVKLDGQWQGVFLPGVATASEVMIA---AQAGITQLKCFPASAIGGAKLLKAWSGPF 157 (217)
T ss_dssp ESSCCHHHH------HHHHHHHHHCSCCCEEEEEECSHHHHHHH---HHTTCCEEEETTTTTTTHHHHHHHHHTTC
T ss_pred eCCCcHHHH------HHHHHcCCCccCCCeEeCCCCCHHHHHHH---HHcCCCEEEECccccccCHHHHHHHHhhh
Confidence 766554444 33333344 799999999998765 889999999988763 4455444443
No 49
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=73.12 E-value=8.4 Score=36.36 Aligned_cols=111 Identities=16% Similarity=0.140 Sum_probs=65.2
Q ss_pred CchhHhHHHHHhCCcEEEEcCc--ch-hhHhhccceeeeeeeeecCCccccCCCCeeEEEEEec----Chh--hhhhhcc
Q 015764 58 ESKQVMTAAVERGWNTFVFLSE--NQ-QLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVS----TPQ--ELQQLQP 128 (401)
Q Consensus 58 ~~K~~vt~AlEsG~~~~v~~~~--~~-~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~----~~e--~~e~~~~ 128 (401)
.+.+++.++.+.|.-++++... +. ++.+.+.++.... ++++++-+-+. .++ +.-..+.
T Consensus 27 s~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~-------------~~p~~v~l~v~~~~~~~~~~~~~~~~~ 93 (328)
T 2gjl_A 27 GRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELT-------------DRPFGVNLTLLPTQKPVPYAEYRAAII 93 (328)
T ss_dssp CSHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHC-------------SSCCEEEEEECCCSSCCCHHHHHHHHH
T ss_pred CcHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhc-------------CCCeEEEEeccccccCccHHHHHHHHH
Confidence 3578899999999888887531 11 2222222221110 11122222232 122 2112222
Q ss_pred ccCCCCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEec
Q 015764 129 ADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKV 190 (401)
Q Consensus 129 ~~~~~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~ 190 (401)
. .+.+.+.+.+.+ | ..++.++...+..++..+.+.++|+. +.+.|+|+|++..
T Consensus 94 ~-~g~d~V~~~~g~----p-~~~~~~l~~~gi~vi~~v~t~~~a~~---~~~~GaD~i~v~g 146 (328)
T 2gjl_A 94 E-AGIRVVETAGND----P-GEHIAEFRRHGVKVIHKCTAVRHALK---AERLGVDAVSIDG 146 (328)
T ss_dssp H-TTCCEEEEEESC----C-HHHHHHHHHTTCEEEEEESSHHHHHH---HHHTTCSEEEEEC
T ss_pred h-cCCCEEEEcCCC----c-HHHHHHHHHcCCCEEeeCCCHHHHHH---HHHcCCCEEEEEC
Confidence 2 357888887764 4 46677776667789999999999875 5678999999954
No 50
>3m7n_A Putative uncharacterized protein AF_0206; exosome, RNA, exonuclease, hydrolase, nuclease, hydrolase-RN; 2.40A {Archaeoglobus fulgidus} PDB: 2ba1_A 3m85_A
Probab=73.07 E-value=8.2 Score=34.24 Aligned_cols=98 Identities=18% Similarity=0.155 Sum_probs=64.5
Q ss_pred EEecCCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEEeccceeEEEEE----ecCCCCeEE----EEEeEecceEEEe
Q 015764 284 VLVPGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEAK----TNSGDQTLY----GIILQNAETVALV 355 (401)
Q Consensus 284 v~~pggkT~YLSEL~sG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLVeAe----~~~~~G~~~----sviLQnAETIRLv 355 (401)
+.+||+.-...+|..+|.-+..- +|+-+....|.+++ +.+++-|+.. +... |..+ .-+-++-+.|.|.
T Consensus 3 iV~PGd~l~~~~~~~~G~Gty~~--~~~i~as~~G~v~~-~~~~v~V~~~~~~~y~p~-GdiV~G~V~~V~~~ga~V~I~ 78 (179)
T 3m7n_A 3 FVMPGDRIGSAEEYVKGEGVYEE--GGELFAAVAGKLII-KDRVAKVESISPIPEIVK-GDVVLGRVVDLRNSIALIEVS 78 (179)
T ss_dssp EECTTCEEEETTTSEECTTEEEE--TTEEEESSSEEEEE-ETTEEEEEESSCCCCCCT-TCEEEEEEEEECSSEEEEEEE
T ss_pred EEcCCCCCCCCCCEeccCCEEEe--CCEEEEEEEEEEEE-eCCEEEEEECCCCcccCC-CCEEEEEEEEEeCCcEEEEEc
Confidence 56799988888888888887765 68999999999998 6678877763 2223 5442 3345567788876
Q ss_pred cCCCCCCC----CCceeeee------------ecCCCCEEEEEecC
Q 015764 356 SPCKGTGE----QEKAIPVT------------SLKVGDEVLLRVQG 385 (401)
Q Consensus 356 ~p~~g~~~----~g~~vsVt------------~LK~GD~VL~~~~~ 385 (401)
.-.++..+ -...+.+. .+++||.|.+++..
T Consensus 79 ~v~~~~~~~~~~~~Gll~isei~~~~~~~~~~~~~~GD~V~akVi~ 124 (179)
T 3m7n_A 79 SKKGENRGPSNRGIGILHVSNVDEGYVKEISEAVGYLDILKARVIG 124 (179)
T ss_dssp EETTCCSCCTTCEEEEEEGGGTTSSCCSSGGGTCCTTCEEEEEEEE
T ss_pred cccCcccccccCeeEEEEHHHcCcchhhCHhhcCCCCCEEEEEEEC
Confidence 51100000 01123332 37999999999876
No 51
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=73.03 E-value=4.2 Score=41.57 Aligned_cols=115 Identities=14% Similarity=0.106 Sum_probs=69.8
Q ss_pred EeCchhHhHHHHHhCCcEEEEcCcch------hhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccc
Q 015764 56 WTESKQVMTAAVERGWNTFVFLSENQ------QLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPA 129 (401)
Q Consensus 56 w~~~K~~vt~AlEsG~~~~v~~~~~~------~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~ 129 (401)
+.+..+.+.+.+|.|+|.+++...+. +.++++.+. .| +.++ ....|.+.++...+..
T Consensus 254 ~~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~---~~------------~~~v-i~g~v~t~e~a~~~~~- 316 (511)
T 3usb_A 254 TADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAK---YP------------SLNI-IAGNVATAEATKALIE- 316 (511)
T ss_dssp STTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHH---CT------------TSEE-EEEEECSHHHHHHHHH-
T ss_pred ccchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHh---CC------------CceE-EeeeeccHHHHHHHHH-
Confidence 55668889999999999999875442 222222211 00 1122 2236788887555443
Q ss_pred cCCCCeEEEeC-----------CCC---eeeehhhhhhcccCCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 130 DGQAENIVIDL-----------PDW---QVIPAENIVASFQGSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 130 ~~~~~~vvv~~-----------~DW---~iIPlENliA~~q~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
..+|.+++.. .+| ++-.+.++.+.+...+..||| .+.+..|+..+ |+.|+|||++-+-
T Consensus 317 -aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~ka---la~GA~~V~vGs~ 390 (511)
T 3usb_A 317 -AGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKA---LAAGAHVVMLGSM 390 (511)
T ss_dssp -HTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHH---HHTTCSEEEESTT
T ss_pred -hCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHH---HHhCchhheecHH
Confidence 2578888721 133 233334444444444567887 78899988766 5579999998764
No 52
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=72.74 E-value=3.4 Score=39.29 Aligned_cols=114 Identities=9% Similarity=0.118 Sum_probs=59.6
Q ss_pred hhHhHHHHHhCCcEEEEcCcchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEec-ChhhhhhhccccCCCCeEEE
Q 015764 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVS-TPQELQQLQPADGQAENIVI 138 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~-~~e~~e~~~~~~~~~~~vvv 138 (401)
...+..|.|.|+|+++++.-..+...++... .++.|.....++.-+ +.|.+..++.... +++-+
T Consensus 115 ~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~-------------~~~~gl~~I~lvap~t~~eri~~i~~~~~--gfiY~ 179 (271)
T 3nav_A 115 DDFYQRCQKAGVDSVLIADVPTNESQPFVAA-------------AEKFGIQPIFIAPPTASDETLRAVAQLGK--GYTYL 179 (271)
T ss_dssp HHHHHHHHHHTCCEEEETTSCGGGCHHHHHH-------------HHHTTCEEEEEECTTCCHHHHHHHHHHCC--SCEEE
T ss_pred HHHHHHHHHCCCCEEEECCCCHHHHHHHHHH-------------HHHcCCeEEEEECCCCCHHHHHHHHHHCC--CeEEE
Confidence 5678999999999999875322222222222 122233322233333 3455555655432 33332
Q ss_pred ------eCCCCee-eehhhhhhcccCC-CceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 139 ------DLPDWQV-IPAENIVASFQGS-GKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 139 ------~~~DW~i-IPlENliA~~q~~-~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
.+..-++ -+++.+++.+... +..++. .++++++|+ .+++.|+|||++-+.
T Consensus 180 vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~~~---~~~~~gADgvIVGSA 239 (271)
T 3nav_A 180 LSRAGVTGAETKANMPVHALLERLQQFDAPPALLGFGISEPAQVK---QAIEAGAAGAISGSA 239 (271)
T ss_dssp CCCC--------CCHHHHHHHHHHHHTTCCCEEECSSCCSHHHHH---HHHHTTCSEEEESHH
T ss_pred EeccCCCCcccCCchhHHHHHHHHHHhcCCCEEEECCCCCHHHHH---HHHHcCCCEEEECHH
Confidence 1222111 2356677765433 223332 466777775 356789999999664
No 53
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=72.39 E-value=23 Score=33.68 Aligned_cols=122 Identities=16% Similarity=0.201 Sum_probs=72.3
Q ss_pred chhHhHHHHHhCCcEEEEcCcc--hhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeE
Q 015764 59 SKQVMTAAVERGWNTFVFLSEN--QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENI 136 (401)
Q Consensus 59 ~K~~vt~AlEsG~~~~v~~~~~--~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~v 136 (401)
+...+..|.+.|+|+++..... .+..+++-..+ ..-|. -+++++.+.++++.+... .++.+
T Consensus 131 d~~qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a-------------~~lGl--~~lvevh~~eEl~~A~~~--ga~iI 193 (272)
T 3tsm_A 131 DPYQVYEARSWGADCILIIMASVDDDLAKELEDTA-------------FALGM--DALIEVHDEAEMERALKL--SSRLL 193 (272)
T ss_dssp STHHHHHHHHTTCSEEEEETTTSCHHHHHHHHHHH-------------HHTTC--EEEEEECSHHHHHHHTTS--CCSEE
T ss_pred CHHHHHHHHHcCCCEEEEcccccCHHHHHHHHHHH-------------HHcCC--eEEEEeCCHHHHHHHHhc--CCCEE
Confidence 4556888999999998876421 11111111111 11132 356789999998776643 57788
Q ss_pred EEeCCCCee--eeh---hhhhhcccCCCceEEEEc--CCHHHHHHHHHHhhcccCeEEE-----ecCCHHHHHHHHHhh
Q 015764 137 VIDLPDWQV--IPA---ENIVASFQGSGKTVFAIS--KTPSEAQIFLEALEQGLGGIVL-----KVEDVKAVLALKEYF 203 (401)
Q Consensus 137 vv~~~DW~i--IPl---ENliA~~q~~~~~l~a~v--~~~~eA~~al~~LE~G~DGVvl-----~~~d~~ev~~l~~~~ 203 (401)
=++.+|-+- +.+ +.|+..+. .+.-++++. ++++|++.+ ++.|+|||++ +++||.+ .+++++
T Consensus 194 Ginnr~l~t~~~dl~~~~~L~~~ip-~~~~vIaesGI~t~edv~~l---~~~Ga~gvLVG~almr~~d~~~--~~~~l~ 266 (272)
T 3tsm_A 194 GVNNRNLRSFEVNLAVSERLAKMAP-SDRLLVGESGIFTHEDCLRL---EKSGIGTFLIGESLMRQHDVAA--ATRALL 266 (272)
T ss_dssp EEECBCTTTCCBCTHHHHHHHHHSC-TTSEEEEESSCCSHHHHHHH---HTTTCCEEEECHHHHTSSCHHH--HHHHHH
T ss_pred EECCCCCccCCCChHHHHHHHHhCC-CCCcEEEECCCCCHHHHHHH---HHcCCCEEEEcHHHcCCcCHHH--HHHHHH
Confidence 787655332 223 34555443 234566654 678888765 6899999998 4677754 344444
No 54
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=72.13 E-value=12 Score=33.93 Aligned_cols=109 Identities=17% Similarity=0.115 Sum_probs=62.0
Q ss_pred hhHhHHHHHhCCcEEEEcCcchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEEe
Q 015764 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVID 139 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vvv~ 139 (401)
.+++.++++.|++.+=++..+..-.+.+..+..--| +..+++ ..+.+.++.+.+.. . .+++++.-
T Consensus 31 ~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~------------~~~vga-gtvi~~d~~~~A~~-a-GAd~v~~p 95 (214)
T 1wbh_A 31 VPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVP------------EAIVGA-GTVLNPQQLAEVTE-A-GAQFAISP 95 (214)
T ss_dssp HHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCT------------TSEEEE-ESCCSHHHHHHHHH-H-TCSCEEES
T ss_pred HHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHCc------------CCEEee-CEEEEHHHHHHHHH-c-CCCEEEcC
Confidence 568999999999998887543211111111211000 112222 23666776555443 2 57888875
Q ss_pred CCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCC
Q 015764 140 LPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192 (401)
Q Consensus 140 ~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d 192 (401)
..| .|+...-. ..+..++..+.|++|++. +++.|+|-|-+-|..
T Consensus 96 ~~d---~~v~~~~~---~~g~~~i~G~~t~~e~~~---A~~~Gad~v~~Fpa~ 139 (214)
T 1wbh_A 96 GLT---EPLLKAAT---EGTIPLIPGISTVSELML---GMDYGLKEFKFFPAE 139 (214)
T ss_dssp SCC---HHHHHHHH---HSSSCEEEEESSHHHHHH---HHHTTCCEEEETTTT
T ss_pred CCC---HHHHHHHH---HhCCCEEEecCCHHHHHH---HHHCCCCEEEEecCc
Confidence 433 23322222 233455656999999865 468999999888743
No 55
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=72.04 E-value=3.2 Score=38.55 Aligned_cols=113 Identities=12% Similarity=0.103 Sum_probs=56.8
Q ss_pred hhHhHHHHHhCCcEEEEcCcchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEe-cChhhhhhhccccCCCCeEE-
Q 015764 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEV-STPQELQQLQPADGQAENIV- 137 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v-~~~e~~e~~~~~~~~~~~vv- 137 (401)
...+..|.+.|+|+++++.-..+...++.... ++.|..+..++.- ++.+.++.++......-|.+
T Consensus 112 ~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~-------------~~~gl~~i~l~~p~t~~~rl~~ia~~a~gfiy~vs 178 (262)
T 2ekc_A 112 EKFCRLSREKGIDGFIVPDLPPEEAEELKAVM-------------KKYVLSFVPLGAPTSTRKRIKLICEAADEMTYFVS 178 (262)
T ss_dssp HHHHHHHHHTTCCEEECTTCCHHHHHHHHHHH-------------HHTTCEECCEECTTCCHHHHHHHHHHCSSCEEEES
T ss_pred HHHHHHHHHcCCCEEEECCCCHHHHHHHHHHH-------------HHcCCcEEEEeCCCCCHHHHHHHHHhCCCCEEEEe
Confidence 46778899999999999864333333332221 1122221122222 34455566665543322222
Q ss_pred ---EeCCCCeee---ehhhhhhcccCC-CceEEE--EcCCHHHHHHHHHHhhcccCeEEEec
Q 015764 138 ---IDLPDWQVI---PAENIVASFQGS-GKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKV 190 (401)
Q Consensus 138 ---v~~~DW~iI---PlENliA~~q~~-~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~ 190 (401)
+.+.. +-. ++.++++.+.+. +..|+. .+++++.++. +..|+|||++-+
T Consensus 179 ~~g~TG~~-~~~~~~~~~~~v~~vr~~~~~pv~vG~GI~t~e~~~~----~~~gADgvIVGS 235 (262)
T 2ekc_A 179 VTGTTGAR-EKLPYERIKKKVEEYRELCDKPVVVGFGVSKKEHARE----IGSFADGVVVGS 235 (262)
T ss_dssp SCC----------CHHHHHHHHHHHHHCCSCEEEESSCCSHHHHHH----HHTTSSEEEECH
T ss_pred cCCccCCC-CCcCcccHHHHHHHHHhhcCCCEEEeCCCCCHHHHHH----HHcCCCEEEECH
Confidence 11111 122 255677766532 223433 3566776655 567899999864
No 56
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=71.45 E-value=11 Score=34.46 Aligned_cols=110 Identities=15% Similarity=0.109 Sum_probs=61.6
Q ss_pred chhHhHHHHHhCCcEEEEcCcchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEE
Q 015764 59 SKQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVI 138 (401)
Q Consensus 59 ~K~~vt~AlEsG~~~~v~~~~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vvv 138 (401)
-.+++.++++.|++.+=++..+..-.+.+..+..--| +..+++ ..+.+.++.+.+.. . .+++++.
T Consensus 31 ~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~------------~l~vga-Gtvl~~d~~~~A~~-a-GAd~v~~ 95 (224)
T 1vhc_A 31 ILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANRP------------DFLIAA-GTVLTAEQVVLAKS-S-GADFVVT 95 (224)
T ss_dssp HHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCT------------TCEEEE-ESCCSHHHHHHHHH-H-TCSEEEC
T ss_pred HHHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhCc------------CcEEee-CcEeeHHHHHHHHH-C-CCCEEEE
Confidence 3578999999999988887543222222222211101 122222 22456666555433 2 5788876
Q ss_pred eCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCC
Q 015764 139 DLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192 (401)
Q Consensus 139 ~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d 192 (401)
-..| .| ++......+..++..+.|++|++. +++.|+|-|-+-|..
T Consensus 96 p~~d---~~---v~~~ar~~g~~~i~Gv~t~~e~~~---A~~~Gad~vk~Fpa~ 140 (224)
T 1vhc_A 96 PGLN---PK---IVKLCQDLNFPITPGVNNPMAIEI---ALEMGISAVKFFPAE 140 (224)
T ss_dssp SSCC---HH---HHHHHHHTTCCEECEECSHHHHHH---HHHTTCCEEEETTTT
T ss_pred CCCC---HH---HHHHHHHhCCCEEeccCCHHHHHH---HHHCCCCEEEEeeCc
Confidence 4444 22 222222234445556899999865 568999999888843
No 57
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=71.31 E-value=5.8 Score=41.47 Aligned_cols=138 Identities=15% Similarity=0.166 Sum_probs=88.4
Q ss_pred hHhHHHHHhCCcEEEEcC-cchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEEe
Q 015764 61 QVMTAAVERGWNTFVFLS-ENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVID 139 (401)
Q Consensus 61 ~~vt~AlEsG~~~~v~~~-~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vvv~ 139 (401)
+++.-|+|-|+|.|-+.. .+++.+.++.++ .-+.|......+..+.++.+|.+++-++.+..-....|-+.|.
T Consensus 220 D~l~fa~~~~vD~ialSFVr~~~Dv~~~r~~------l~~~g~~~~~~~~~i~IiaKIE~~~av~NldeIi~~sDgIMVA 293 (526)
T 4drs_A 220 DIVDFALKYNLDFIALSFVQNGADVQLCRQI------ISENTQYSNGIPSSIKIISKIENLEGVINFDSICSESDGIMVA 293 (526)
T ss_dssp HHHHTTTTTTCSEEEETTCCSHHHHHHHHHH------HHTCCTTTTTCCCCCEEEEEECSHHHHHTHHHHHHHSSEEEEE
T ss_pred HHHHHHHHhccCeeeecccCchhhHHHHHHH------HHhhCcccccccccceeeeehhccHHHHHHHHHHhhccEEEEE
Confidence 457889999999766553 234455544444 1122221122234566788999999999888877778999997
Q ss_pred CCCCee-eehhhh-------hhcccCCCceEEEE-----------cCCHHHHHHHHHHhhcccCeEEEecC-----CH-H
Q 015764 140 LPDWQV-IPAENI-------VASFQGSGKTVFAI-----------SKTPSEAQIFLEALEQGLGGIVLKVE-----DV-K 194 (401)
Q Consensus 140 ~~DW~i-IPlENl-------iA~~q~~~~~l~a~-----------v~~~~eA~~al~~LE~G~DGVvl~~~-----d~-~ 194 (401)
-.|--+ ||+|.+ |......+.-+|.. ..+-.|+--...+..-|+|+|+|..+ -| +
T Consensus 294 RGDLgvEip~e~vp~~QK~II~~c~~~gKPVI~ATQmLeSMi~np~PTRAEvsDVAnAV~DGaDavMLSgETA~G~yPve 373 (526)
T 4drs_A 294 RGDLGMEIPPEKIFVAQKCMISKCNVAGKPVVTATQMLESMIKSNRPTRAEMTDVANAVLDGSDCVMLSGETANGAFPFD 373 (526)
T ss_dssp CTTHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESCTTGGGGSSSSCCHHHHHHHHHHHHHTCSEEEESHHHHSCSCHHH
T ss_pred CCcccccCCHHHHHHHHHHHHHHHHHcCCeEEEhhhhhHHHhhCCCCCCchHHHHHHHHHhCCceEEEcchhhcccCHHH
Confidence 666443 566554 44433333334432 44568888899999999999999843 23 5
Q ss_pred HHHHHHHhhc
Q 015764 195 AVLALKEYFD 204 (401)
Q Consensus 195 ev~~l~~~~~ 204 (401)
.|+-+.+++.
T Consensus 374 aV~~m~~I~~ 383 (526)
T 4drs_A 374 AVNVMSRVCA 383 (526)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5666666654
No 58
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=71.08 E-value=12 Score=37.64 Aligned_cols=109 Identities=16% Similarity=0.117 Sum_probs=65.0
Q ss_pred hhHhHHHHHhCCcEEEEcCc--c----hhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCC
Q 015764 60 KQVMTAAVERGWNTFVFLSE--N----QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQA 133 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~--~----~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~ 133 (401)
.+.+.+++|.|+|.|+++.. + .+.++++.+- -+.++.. ..+.+.++...+.. ..+
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~----------------~~i~Vi~-g~V~t~e~A~~a~~--aGA 206 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSK----------------MNIDVIV-GNVVTEEATKELIE--NGA 206 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTT----------------CCCEEEE-EEECSHHHHHHHHH--TTC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhc----------------CCCeEEE-eecCCHHHHHHHHH--cCC
Confidence 78999999999999887432 1 1222222111 0222211 25788887655543 368
Q ss_pred CeEEEeC--------C---CCeeee----hhhhhhcccCCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 134 ENIVIDL--------P---DWQVIP----AENIVASFQGSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 134 ~~vvv~~--------~---DW~iIP----lENliA~~q~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
|.|++.. + +|. .| +.++.++++..+..||| .+.+.+++..+ |+.|+|||.+-+.
T Consensus 207 D~I~vG~g~Gs~~~tr~~~g~g-~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~ka---lalGAd~V~vGt~ 277 (400)
T 3ffs_A 207 DGIKVGIGPGSICTTRIVAGVG-VPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKA---LAVGASSVMIGSI 277 (400)
T ss_dssp SEEEECC---------CCSCBC-CCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHH---HTTTCSEEEECGG
T ss_pred CEEEEeCCCCcCcccccccccc-hhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHH---HHcCCCEEEEChH
Confidence 8888821 1 121 24 33444444444667888 57888887665 4569999998764
No 59
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=71.01 E-value=18 Score=27.90 Aligned_cols=66 Identities=14% Similarity=0.189 Sum_probs=42.5
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 132 QAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
..+.++++..-.. ..--.++..+.. ....++...... +......+++.|+++++.+|-+++++.+.
T Consensus 59 ~~dlii~D~~l~~-~~g~~~~~~l~~~~~~~~~~ii~ls~~~-~~~~~~~~~~~g~~~~l~kP~~~~~L~~~ 128 (143)
T 2qvg_A 59 HPKLILLDINIPK-MNGIEFLKELRDDSSFTDIEVFVLTAAY-TSKDKLAFESLNIRGHLIKPLDYGEAIKL 128 (143)
T ss_dssp CCSEEEEETTCTT-SCHHHHHHHHTTSGGGTTCEEEEEESCC-CHHHHHHHTTTTCCEEEESSCCHHHHHHH
T ss_pred CCCEEEEecCCCC-CCHHHHHHHHHcCccccCCcEEEEeCCC-CHHHHHHHHhcCCCeEEECCCCHHHHHHH
Confidence 4677887643222 222244444443 245566655543 45567788999999999999999987654
No 60
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=70.38 E-value=7.3 Score=37.50 Aligned_cols=42 Identities=12% Similarity=0.070 Sum_probs=36.2
Q ss_pred ceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHHhhc
Q 015764 160 KTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFD 204 (401)
Q Consensus 160 ~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l~~~~~ 204 (401)
.+|..+|.|.+||+.+ ++.|+|.|+|++=+++++++..+.+.
T Consensus 194 ~~I~VEV~tleea~eA---~~aGaD~I~LDn~~~e~l~~av~~l~ 235 (285)
T 1o4u_A 194 TKIEVEVENLEDALRA---VEAGADIVMLDNLSPEEVKDISRRIK 235 (285)
T ss_dssp SCEEEEESSHHHHHHH---HHTTCSEEEEESCCHHHHHHHHHHHH
T ss_pred ceEEEEeCCHHHHHHH---HHcCCCEEEECCCCHHHHHHHHHHhh
Confidence 5799999999998876 56799999999999999988877663
No 61
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=70.15 E-value=3.7 Score=43.29 Aligned_cols=134 Identities=16% Similarity=0.204 Sum_probs=85.7
Q ss_pred CchhHhHHHHHhCCcEEEEcC-cchhhHhhccceeeeeeeeecCCccccCCC-CeeEEEEEecChhhhhhhccccCCCCe
Q 015764 58 ESKQVMTAAVERGWNTFVFLS-ENQQLAIDWSTIALLDPLFIKEGEVYDSGD-RRVGSIIEVSTPQELQQLQPADGQAEN 135 (401)
Q Consensus 58 ~~K~~vt~AlEsG~~~~v~~~-~~~~~~~~~~~i~~i~~l~~~~g~~~~~~g-k~v~~~~~v~~~e~~e~~~~~~~~~~~ 135 (401)
.|++.+.-|++.|+|.+.++. .+++.++++.++ +.+.| ..+..+.+|.+++-++.+..-....|-
T Consensus 174 kD~~di~~~l~~g~d~v~~sfV~~a~dv~~~~~~-------------l~~~~~~~~~iiakIE~~eav~nldeIl~~~Dg 240 (587)
T 2e28_A 174 KDRADILFGIRQGIDFIAASFVRRASDVLEIREL-------------LEAHDALHIQIIAKIENEEGVANIDEILEAADG 240 (587)
T ss_dssp HHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHH-------------HHHTTCTTSEEEEEECSHHHHHTHHHHHHHSSE
T ss_pred ccHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHH-------------HHHcCCCCceEEEEECCHHHHHhHHHHHHhCCE
Confidence 468889999999999999885 345555555544 12223 256788899999988776665555688
Q ss_pred EEEeCCCCe-eeehh-------hhhhcccCCCceEEEE-----------cCCHHHHHHHHHHhhcccCeEEEecCC----
Q 015764 136 IVIDLPDWQ-VIPAE-------NIVASFQGSGKTVFAI-----------SKTPSEAQIFLEALEQGLGGIVLKVED---- 192 (401)
Q Consensus 136 vvv~~~DW~-iIPlE-------NliA~~q~~~~~l~a~-----------v~~~~eA~~al~~LE~G~DGVvl~~~d---- 192 (401)
+.|-..|-- =||+| .+|++....+.-++.. ..+-.|+--...+.--|+|+|+|..+.
T Consensus 241 ImVargDLgvei~~~~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAE~sDvanav~dG~DavMLSgETA~G~ 320 (587)
T 2e28_A 241 LMVARGDLGVEIPAEEVPLIQKLLIKKSNMLGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAVMLSGETAAGQ 320 (587)
T ss_dssp EEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCS
T ss_pred EEEcCchhhhhcCHHHHHHHHHHHHHHHHHcCCCeEEechhhHhhccCCCccHHHHhccchhhhhCcceeeecccccCCC
Confidence 887433321 13444 4554443333333331 124478888888888999999995443
Q ss_pred -H-HHHHHHHHhhc
Q 015764 193 -V-KAVLALKEYFD 204 (401)
Q Consensus 193 -~-~ev~~l~~~~~ 204 (401)
| +.|+-+.+++.
T Consensus 321 yPveaV~~m~~I~~ 334 (587)
T 2e28_A 321 YPVEAVKTMHQIAL 334 (587)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 3 45666666554
No 62
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=70.01 E-value=17 Score=31.34 Aligned_cols=112 Identities=21% Similarity=0.233 Sum_probs=60.9
Q ss_pred hHhHHHHHhCCcEEEEcCcc--hhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEE
Q 015764 61 QVMTAAVERGWNTFVFLSEN--QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVI 138 (401)
Q Consensus 61 ~~vt~AlEsG~~~~v~~~~~--~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vvv 138 (401)
+-+..|++.|+|.+.++..+ .+.++++. .+..++ +.+.++++...+. ...++++++
T Consensus 77 ~~~~~a~~~gad~v~l~~~~~~~~~~~~~~------------------~~~~~~--v~~~t~~e~~~~~--~~g~d~i~~ 134 (215)
T 1xi3_A 77 DRVDVALAVDADGVQLGPEDMPIEVAKEIA------------------PNLIIG--ASVYSLEEALEAE--KKGADYLGA 134 (215)
T ss_dssp SCHHHHHHHTCSEEEECTTSCCHHHHHHHC------------------TTSEEE--EEESSHHHHHHHH--HHTCSEEEE
T ss_pred ChHHHHHHcCCCEEEECCccCCHHHHHHhC------------------CCCEEE--EecCCHHHHHHHH--hcCCCEEEE
Confidence 34467888899988876422 22232221 122333 3567887755432 235899998
Q ss_pred eC------------CCCeeeehhhhhhcccCCCceEEEE--cCCHHHHHHHHHHhhcccCeEEEec-----CCH-HHHHH
Q 015764 139 DL------------PDWQVIPAENIVASFQGSGKTVFAI--SKTPSEAQIFLEALEQGLGGIVLKV-----EDV-KAVLA 198 (401)
Q Consensus 139 ~~------------~DW~iIPlENliA~~q~~~~~l~a~--v~~~~eA~~al~~LE~G~DGVvl~~-----~d~-~ev~~ 198 (401)
.. .+|+.| ..+...+ +..+++. ++ +++++. +++.|+|||.+-+ +|+ +.+++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~l--~~l~~~~---~~pvia~GGI~-~~nv~~---~~~~Ga~gv~vgs~i~~~~d~~~~~~~ 205 (215)
T 1xi3_A 135 GSVFPTKTKEDARVIGLEGL--RKIVESV---KIPVVAIGGIN-KDNARE---VLKTGVDGIAVISAVMGAEDVRKATEE 205 (215)
T ss_dssp ECSSCC----CCCCCHHHHH--HHHHHHC---SSCEEEESSCC-TTTHHH---HHTTTCSEEEESHHHHTSSSHHHHHHH
T ss_pred cCCccCCCCCCCCCcCHHHH--HHHHHhC---CCCEEEECCcC-HHHHHH---HHHcCCCEEEEhHHHhCCCCHHHHHHH
Confidence 43 123322 2232222 3345543 34 565554 4568999998764 566 36666
Q ss_pred HHHhh
Q 015764 199 LKEYF 203 (401)
Q Consensus 199 l~~~~ 203 (401)
+++.+
T Consensus 206 ~~~~~ 210 (215)
T 1xi3_A 206 LRKIV 210 (215)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65554
No 63
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=69.78 E-value=3 Score=40.04 Aligned_cols=69 Identities=14% Similarity=0.041 Sum_probs=32.8
Q ss_pred ceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHHhhccc-------c-cccceeeeeEEEEEEEEEcCCcce
Q 015764 160 KTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFDGR-------N-EVSNLLSLMKATVTRVDVAGMGDR 231 (401)
Q Consensus 160 ~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l~~~~~~~-------~-~~~~~l~L~~atVt~V~~vGmGDR 231 (401)
.++...+.+.+|++.++ +.|+|+|.|++-++++++++++.+... + ..++.+ ...+|.++...|. |+
T Consensus 200 ~~i~vev~tlee~~~A~---~aGaD~I~ld~~~~~~l~~~v~~l~~~~~g~~~v~I~ASGGI--t~~ni~~~~~~Gv-D~ 273 (294)
T 3c2e_A 200 VKIEVECLSEDEATEAI---EAGADVIMLDNFKGDGLKMCAQSLKNKWNGKKHFLLECSGGL--NLDNLEEYLCDDI-DI 273 (294)
T ss_dssp SCEEEECSSSHHHHHHH---HHTCSEEECCC---------------------CCEEEEECCC--CC------CCCSC-SE
T ss_pred CeEEEecCCHHHHHHHH---HcCCCEEEECCCCHHHHHHHHHHhcccccCCCCeEEEEECCC--CHHHHHHHHHcCC-CE
Confidence 57999999999987665 579999999999999888776655321 0 123333 4556666666665 55
Q ss_pred EEE
Q 015764 232 VCV 234 (401)
Q Consensus 232 VCV 234 (401)
+.|
T Consensus 274 i~v 276 (294)
T 3c2e_A 274 YST 276 (294)
T ss_dssp EEC
T ss_pred EEE
Confidence 444
No 64
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=69.76 E-value=14 Score=32.73 Aligned_cols=81 Identities=12% Similarity=0.136 Sum_probs=46.3
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC-CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHH
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG-SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVK 194 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~-~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ 194 (401)
...+.++.-.... ....|.+|++..-... .--.++..+.. ....|+..... .+......+++.|++|.+.+|-+++
T Consensus 66 ~~~~~~~al~~~~-~~~~DlvllD~~lp~~-~G~~l~~~lr~~~~~~iI~lt~~-~~~~~~~~a~~~Ga~~yl~Kp~~~~ 142 (249)
T 3q9s_A 66 HADSAMNGLIKAR-EDHPDLILLDLGLPDF-DGGDVVQRLRKNSALPIIVLTAR-DTVEEKVRLLGLGADDYLIKPFHPD 142 (249)
T ss_dssp EESSHHHHHHHHH-HSCCSEEEEECCSCHH-HHHHHHHHHHTTCCCCEEEEESC-CSHHHHHHHHHHTCSEEEESSCCHH
T ss_pred EeCCHHHHHHHHh-cCCCCEEEEcCCCCCC-CHHHHHHHHHcCCCCCEEEEECC-CCHHHHHHHHHCCCcEEEECCCCHH
Confidence 3556555333222 2357888885432221 11123333322 23455554443 3455677889999999999999998
Q ss_pred HHHHH
Q 015764 195 AVLAL 199 (401)
Q Consensus 195 ev~~l 199 (401)
++.+.
T Consensus 143 ~L~~~ 147 (249)
T 3q9s_A 143 ELLAR 147 (249)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87644
No 65
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=69.73 E-value=4.7 Score=39.29 Aligned_cols=42 Identities=12% Similarity=0.027 Sum_probs=34.6
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHHhh
Q 015764 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYF 203 (401)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l~~~~ 203 (401)
..+|..+|.|.+|++.+ ++.|+|+|+|+.-+++++++..+.+
T Consensus 209 ~~~ieVEvdtlde~~eA---l~aGaD~I~LDn~~~~~l~~av~~i 250 (298)
T 3gnn_A 209 EVPVQIEVETLDQLRTA---LAHGARSVLLDNFTLDMMRDAVRVT 250 (298)
T ss_dssp -CCCEEEESSHHHHHHH---HHTTCEEEEEESCCHHHHHHHHHHH
T ss_pred CCCEEEEeCCHHHHHHH---HHcCCCEEEECCCCHHHHHHHHHHh
Confidence 35789999999987654 5579999999999999998777655
No 66
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=69.42 E-value=12 Score=35.05 Aligned_cols=109 Identities=16% Similarity=0.105 Sum_probs=69.1
Q ss_pred CchhHhHHHHHhCCcEEEEcCcch---hhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCC
Q 015764 58 ESKQVMTAAVERGWNTFVFLSENQ---QLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAE 134 (401)
Q Consensus 58 ~~K~~vt~AlEsG~~~~v~~~~~~---~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~ 134 (401)
+-.++..++++.|+..+=++-.+. +..+++.+- + | +-.++ ...|.+.++.+.+... .++
T Consensus 47 ~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~--~-~------------~~~iG-aGTVlt~~~a~~Ai~A--GA~ 108 (232)
T 4e38_A 47 DIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQA--Q-P------------EMLIG-AGTILNGEQALAAKEA--GAT 108 (232)
T ss_dssp GHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHH--C-T------------TCEEE-EECCCSHHHHHHHHHH--TCS
T ss_pred HHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHh--C-C------------CCEEe-ECCcCCHHHHHHHHHc--CCC
Confidence 347788899999999888764332 222222221 0 1 11222 2347788886665543 578
Q ss_pred eEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 015764 135 NIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (401)
Q Consensus 135 ~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (401)
+++.-..| +.++...+..+..++..+.|++|+..| ++.|+|-|=+-|-..
T Consensus 109 fIvsP~~~------~~vi~~~~~~gi~~ipGv~TptEi~~A---~~~Gad~vK~FPa~~ 158 (232)
T 4e38_A 109 FVVSPGFN------PNTVRACQEIGIDIVPGVNNPSTVEAA---LEMGLTTLKFFPAEA 158 (232)
T ss_dssp EEECSSCC------HHHHHHHHHHTCEEECEECSHHHHHHH---HHTTCCEEEECSTTT
T ss_pred EEEeCCCC------HHHHHHHHHcCCCEEcCCCCHHHHHHH---HHcCCCEEEECcCcc
Confidence 88764433 334444444566788999999998776 789999999988543
No 67
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=68.82 E-value=11 Score=35.53 Aligned_cols=42 Identities=14% Similarity=0.094 Sum_probs=35.7
Q ss_pred ceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHHhhc
Q 015764 160 KTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFD 204 (401)
Q Consensus 160 ~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l~~~~~ 204 (401)
.++...+.+++|++.++ +.|+|+|.+++-++++++++++.+.
T Consensus 183 ~~i~vev~tlee~~~A~---~aGaD~I~ld~~~~~~l~~~v~~l~ 224 (273)
T 2b7n_A 183 AKIEIECESFEEAKNAM---NAGADIVMCDNLSVLETKEIAAYRD 224 (273)
T ss_dssp CCEEEEESSHHHHHHHH---HHTCSEEEEETCCHHHHHHHHHHHH
T ss_pred ceEEEEcCCHHHHHHHH---HcCCCEEEECCCCHHHHHHHHHHhh
Confidence 47999999999987665 5799999999999999988777653
No 68
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=68.42 E-value=19 Score=32.03 Aligned_cols=134 Identities=15% Similarity=0.031 Sum_probs=63.9
Q ss_pred EEEEEe--CchhHhHHHHHhCCcEEEEcCc---chhhHhhcccee--eeeeeeecCCccccCCCCeeEEEEEecChhhhh
Q 015764 52 RVWIWT--ESKQVMTAAVERGWNTFVFLSE---NQQLAIDWSTIA--LLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQ 124 (401)
Q Consensus 52 ~vWiw~--~~K~~vt~AlEsG~~~~v~~~~---~~~~~~~~~~i~--~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e 124 (401)
.+++-. .+.+.+..+++.|+|.+++... +.+..+++..++ .+-.+...+|.+.- .|-.-. .-.+..++.
T Consensus 75 pvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~g~~i~~~~d~~~~~v~~-~g~~~~---~~~~~~e~~ 150 (241)
T 1qo2_A 75 HIQIGGGIRSLDYAEKLRKLGYRRQIVSSKVLEDPSFLKSLREIDVEPVFSLDTRGGRVAF-KGWLAE---EEIDPVSLL 150 (241)
T ss_dssp GEEEESSCCSHHHHHHHHHTTCCEEEECHHHHHCTTHHHHHHTTTCEEEEEEEEETTEECC-TTCSSC---SCCCHHHHH
T ss_pred cEEEECCCCCHHHHHHHHHCCCCEEEECchHhhChHHHHHHHHcCCcEEEEEEecCCEEEE-CCceec---CCCCHHHHH
Confidence 366643 4567788899999999998753 223333332221 11111112221110 110000 001333332
Q ss_pred hhccccCCCCeEEEeCCCC----eeeehhhhhhcccCCCceEEE--EcCCHHHHHHHHHHh--hcc-cCeEEEec
Q 015764 125 QLQPADGQAENIVIDLPDW----QVIPAENIVASFQGSGKTVFA--ISKTPSEAQIFLEAL--EQG-LGGIVLKV 190 (401)
Q Consensus 125 ~~~~~~~~~~~vvv~~~DW----~iIPlENliA~~q~~~~~l~a--~v~~~~eA~~al~~L--E~G-~DGVvl~~ 190 (401)
..+.. ..++.+++...+- +-+.+|.+-.-.+..+..+++ .++++++++.+++.- -.| +|||++-+
T Consensus 151 ~~~~~-~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgs 224 (241)
T 1qo2_A 151 KRLKE-YGLEEIVHTEIEKDGTLQEHDFSLTKKIAIEAEVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGR 224 (241)
T ss_dssp HHHHT-TTCCEEEEEETTHHHHTCCCCHHHHHHHHHHHTCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECH
T ss_pred HHHHh-CCCCEEEEEeecccccCCcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeH
Confidence 22222 3467788765321 112334332211222446776 478888888876540 119 99999864
No 69
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=68.04 E-value=16 Score=27.93 Aligned_cols=81 Identities=14% Similarity=0.169 Sum_probs=44.4
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (401)
...+.++.-..... ...+.++++..-.. ..--.++..+. .....++...... +......+++.|+++++.+|-++
T Consensus 31 ~~~~~~~a~~~~~~-~~~dlii~d~~l~~-~~g~~~~~~l~~~~~~~~ii~~s~~~-~~~~~~~~~~~g~~~~l~kp~~~ 107 (134)
T 3f6c_A 31 ELTEGGSAVQRVET-LKPDIVIIDVDIPG-VNGIQVLETLRKRQYSGIIIIVSAKN-DHFYGKHCADAGANGFVSKKEGM 107 (134)
T ss_dssp EESSSTTHHHHHHH-HCCSEEEEETTCSS-SCHHHHHHHHHHTTCCSEEEEEECC----CTHHHHHHTTCSEEEEGGGCT
T ss_pred EcCCHHHHHHHHHh-cCCCEEEEecCCCC-CChHHHHHHHHhcCCCCeEEEEeCCC-ChHHHHHHHHhCCCEEEeCCCCH
Confidence 34555443332222 24677888543222 12222333332 2244566555443 44556788899999999999998
Q ss_pred HHHHHH
Q 015764 194 KAVLAL 199 (401)
Q Consensus 194 ~ev~~l 199 (401)
+++.+.
T Consensus 108 ~~l~~~ 113 (134)
T 3f6c_A 108 NNIIAA 113 (134)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877654
No 70
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=67.92 E-value=7 Score=37.66 Aligned_cols=40 Identities=15% Similarity=0.016 Sum_probs=35.4
Q ss_pred eEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHHhh
Q 015764 161 TVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYF 203 (401)
Q Consensus 161 ~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l~~~~ 203 (401)
+|..++.+.+|++.+ ++.|+|+|.|++-++++++++++.+
T Consensus 210 kI~vev~tlee~~eA---~~aGaD~I~ld~~~~e~l~~~v~~~ 249 (296)
T 1qap_A 210 PVEVEVENLDELDDA---LKAGADIIMLDNFNTDQMREAVKRV 249 (296)
T ss_dssp CEEEEESSHHHHHHH---HHTTCSEEEESSCCHHHHHHHHHTT
T ss_pred cEEEEeCCHHHHHHH---HHcCCCEEEECCCCHHHHHHHHHHh
Confidence 899999999998776 5779999999999999998888766
No 71
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=67.78 E-value=6.9 Score=36.75 Aligned_cols=59 Identities=10% Similarity=0.282 Sum_probs=38.2
Q ss_pred CCCCCeeeec----CCceeEEEe-------------cCC-ceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEEe----cc
Q 015764 268 IASRPFRVNA----GPVHAYVLV-------------PGG-KTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIE----SR 325 (401)
Q Consensus 268 va~RPFRVNA----GaVHaYv~~-------------pgg-kT~YLSEL~sG~eVLvVd~~G~tR~~~VGRvKIE----~R 325 (401)
.-.|||-+-- +.++=+|.. |+| -|+||+.|+.||+|.+-...|+.. ..-+ .+
T Consensus 98 ~~~R~ySIaS~p~~~~l~l~Vk~~~y~~~~~~~~~~~~G~~S~~L~~l~~Gd~v~v~gP~G~f~------l~~~~~~~~~ 171 (316)
T 3jqq_A 98 RCARLYSISSSNNMENLSVAIKIHKYEQTENAPNITNYGYCSGFIKNLKINDDIYLTGAHGYFN------LPNDAIQKNT 171 (316)
T ss_dssp CCCEEEEBCSCTTSSSEEEEEECCBC---------CCBCHHHHHHHTCCTTCEEEEEEEECCCC------CCTTHHHHTC
T ss_pred ccceeeecccCCCCCeEEEEEEEEEecccccccCcCCCCchhHHHhhCCCCCEEEEEecCCceE------cCCcccCCCC
Confidence 3456666533 445555654 334 588999999999999866666531 1111 57
Q ss_pred ceeEEEE
Q 015764 326 PLILVEA 332 (401)
Q Consensus 326 PLlLVeA 332 (401)
|++||=+
T Consensus 172 ~vvlIAg 178 (316)
T 3jqq_A 172 NFIFIAT 178 (316)
T ss_dssp CEEEEEE
T ss_pred cEEEEeC
Confidence 8998865
No 72
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=67.57 E-value=18 Score=31.56 Aligned_cols=114 Identities=16% Similarity=0.166 Sum_probs=58.1
Q ss_pred HhHHHHHhCCcEEEEcCcchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEEe--
Q 015764 62 VMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVID-- 139 (401)
Q Consensus 62 ~vt~AlEsG~~~~v~~~~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vvv~-- 139 (401)
.+..|++.|+|.+.++..+.+ ..++.+. ++ . ..++ +.+.++++...+. ...+|++++.
T Consensus 86 ~~~~a~~~gad~v~l~~~~~~-~~~~~~~-------------~g-~-~~~~--~s~~t~~e~~~a~--~~g~d~v~~~~v 145 (227)
T 2tps_A 86 DVELALNLKADGIHIGQEDAN-AKEVRAA-------------IG-D-MILG--VSAHTMSEVKQAE--EDGADYVGLGPI 145 (227)
T ss_dssp CHHHHHHHTCSEEEECTTSSC-HHHHHHH-------------HT-T-SEEE--EEECSHHHHHHHH--HHTCSEEEECCS
T ss_pred HHHHHHHcCCCEEEECCCccC-HHHHHHh-------------cC-C-cEEE--EecCCHHHHHHHH--hCCCCEEEECCC
Confidence 356788888888887554321 1111100 00 0 1122 2456777654433 2358899861
Q ss_pred C-----------CCCeeeehhhhhhcccCCCceEEEE--cCCHHHHHHHHHHhhcccCeEEEec-----CCH-HHHHHHH
Q 015764 140 L-----------PDWQVIPAENIVASFQGSGKTVFAI--SKTPSEAQIFLEALEQGLGGIVLKV-----EDV-KAVLALK 200 (401)
Q Consensus 140 ~-----------~DW~iIPlENliA~~q~~~~~l~a~--v~~~~eA~~al~~LE~G~DGVvl~~-----~d~-~ev~~l~ 200 (401)
+ .+|..+ ..+...+ . +..+++. ++ ++.++. +++.|+|||.+-+ +|+ +.+++++
T Consensus 146 ~~t~~~~~~~~~~~~~~l--~~~~~~~-~-~~pvia~GGI~-~~nv~~---~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~ 217 (227)
T 2tps_A 146 YPTETKKDTRAVQGVSLI--EAVRRQG-I-SIPIVGIGGIT-IDNAAP---VIQAGADGVSMISAISQAEDPESAARKFR 217 (227)
T ss_dssp SCCCSSSSCCCCCTTHHH--HHHHHTT-C-CCCEEEESSCC-TTTSHH---HHHTTCSEEEESHHHHTSSCHHHHHHHHH
T ss_pred cCCCCCCCCCCccCHHHH--HHHHHhC-C-CCCEEEEcCCC-HHHHHH---HHHcCCCEEEEhHHhhcCCCHHHHHHHHH
Confidence 1 134332 2222222 1 1345543 33 555554 4567999998865 577 6666666
Q ss_pred Hhh
Q 015764 201 EYF 203 (401)
Q Consensus 201 ~~~ 203 (401)
+.+
T Consensus 218 ~~~ 220 (227)
T 2tps_A 218 EEI 220 (227)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 73
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=67.46 E-value=2.9 Score=43.63 Aligned_cols=134 Identities=19% Similarity=0.190 Sum_probs=85.0
Q ss_pred CchhHh-HHHHHhCCcEEEEcC-cchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCe
Q 015764 58 ESKQVM-TAAVERGWNTFVFLS-ENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAEN 135 (401)
Q Consensus 58 ~~K~~v-t~AlEsG~~~~v~~~-~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~ 135 (401)
+|++-+ ..|+|.|+|.+.++. .+++.+.++.++ +.+.|..+..+.+|.+++-++.+..-....|-
T Consensus 208 kD~~Dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~-------------l~~~~~~~~iiaKIE~~eav~nldeIl~~sDg 274 (511)
T 3gg8_A 208 KDKHDILNFGIPMGCNFIAASFVQSADDVRYIRGL-------------LGPRGRHIRIIPKIENVEGLVNFDEILAEADG 274 (511)
T ss_dssp HHHHHHHHTTTTTTCCEEEETTCCSHHHHHHHHHH-------------HTGGGTTCEEEEEECSHHHHHTHHHHHHHCSC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHH-------------HHhcCCCCeEEEEECCHHHHHhHHHHHHhCCe
Confidence 466667 999999999887764 234444444443 23334456778899999988777665555788
Q ss_pred EEEeCCCCe-eeehhhh-------hhcccCCCceEEEE-----------cCCHHHHHHHHHHhhcccCeEEEecCC----
Q 015764 136 IVIDLPDWQ-VIPAENI-------VASFQGSGKTVFAI-----------SKTPSEAQIFLEALEQGLGGIVLKVED---- 192 (401)
Q Consensus 136 vvv~~~DW~-iIPlENl-------iA~~q~~~~~l~a~-----------v~~~~eA~~al~~LE~G~DGVvl~~~d---- 192 (401)
++|-..|-- =||+|.+ |.+....+.-++.. ..+-.|+--...+.--|+|+|+|..+.
T Consensus 275 imVaRGDLgvei~~e~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAEvsDVAnAV~dGaDavMLSgETA~G~ 354 (511)
T 3gg8_A 275 IMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPVITATQMLESMIKNPRPTRAEAADVANAVLDGTDCVMLSGETANGE 354 (511)
T ss_dssp EEEEHHHHHHHSCHHHHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCS
T ss_pred EEEecchhcCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHhCCCEEEecccccCCC
Confidence 888443432 1466654 33332233334431 245578888899999999999996442
Q ss_pred -H-HHHHHHHHhhc
Q 015764 193 -V-KAVLALKEYFD 204 (401)
Q Consensus 193 -~-~ev~~l~~~~~ 204 (401)
| +.|+-+.+++.
T Consensus 355 yPveaV~~M~~I~~ 368 (511)
T 3gg8_A 355 FPVITVETMARICY 368 (511)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 3 56666666664
No 74
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=66.76 E-value=16 Score=31.29 Aligned_cols=71 Identities=13% Similarity=0.166 Sum_probs=42.6
Q ss_pred CCCeEEEeCCCCeeeehhhhhhccc------CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHHhhc
Q 015764 132 QAENIVIDLPDWQVIPAENIVASFQ------GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFD 204 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q------~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l~~~~~ 204 (401)
..|.+|++..-.. ..--.++..+. +....++.......+......+++.|++++|.+|-+ .-...++.++.
T Consensus 119 ~~dlillD~~lp~-~~G~el~~~lr~~~~~~~~~~piI~ls~~~~~~~~~~~~~~~Ga~~~l~KP~~-~L~~~i~~~l~ 195 (206)
T 3mm4_A 119 PFDYIFMDCQMPE-MDGYEATREIRKVEKSYGVRTPIIAVSGHDPGSEEARETIQAGMDAFLDKSLN-QLANVIREIES 195 (206)
T ss_dssp SCSEEEEESCCSS-SCHHHHHHHHHHHHHTTTCCCCEEEEESSCCCHHHHHHHHHHTCSEEEETTCT-THHHHHHHHC-
T ss_pred CCCEEEEcCCCCC-CCHHHHHHHHHhhhhhcCCCCcEEEEECCCCcHHHHHHHHhCCCCEEEcCcHH-HHHHHHHHHHh
Confidence 4678888543221 11122333332 245677777766545566778899999999999987 44444455553
No 75
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=66.69 E-value=6.3 Score=37.18 Aligned_cols=114 Identities=9% Similarity=-0.015 Sum_probs=58.4
Q ss_pred hhHhHHHHHhCCcEEEEcCcchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEE-ecChhhhhhhccccCCCCeEE-
Q 015764 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIE-VSTPQELQQLQPADGQAENIV- 137 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~-v~~~e~~e~~~~~~~~~~~vv- 137 (401)
...+..|.+.|+|+++++.-..+...+|.... ++.|.....++. .++.+.++.++.......|++
T Consensus 109 ~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~-------------~~~gl~~i~liap~s~~eri~~ia~~~~gfiy~vs 175 (271)
T 1ujp_A 109 ERFFGLFKQAGATGVILPDLPPDEDPGLVRLA-------------QEIGLETVFLLAPTSTDARIATVVRHATGFVYAVS 175 (271)
T ss_dssp HHHHHHHHHHTCCEEECTTCCGGGCHHHHHHH-------------HHHTCEEECEECTTCCHHHHHHHHTTCCSCEEEEC
T ss_pred HHHHHHHHHcCCCEEEecCCCHHHHHHHHHHH-------------HHcCCceEEEeCCCCCHHHHHHHHHhCCCCEEEEe
Confidence 46678899999999998753222222221110 111111111111 234556666665544444443
Q ss_pred ---EeCCCCe-eeehhhhhhcccCC-CceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 138 ---IDLPDWQ-VIPAENIVASFQGS-GKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 138 ---v~~~DW~-iIPlENliA~~q~~-~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
+.+.+-. --|++.+++++... +..|++ .++++++|+.+ .|+|||++-+.
T Consensus 176 ~~G~TG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~-----~~ADgVIVGSA 231 (271)
T 1ujp_A 176 VTGVTGMRERLPEEVKDLVRRIKARTALPVAVGFGVSGKATAAQA-----AVADGVVVGSA 231 (271)
T ss_dssp C------------CCHHHHHHHHTTCCSCEEEESCCCSHHHHHHH-----TTSSEEEECHH
T ss_pred cCcccCCCCCCCccHHHHHHHHHhhcCCCEEEEcCCCCHHHHHHh-----cCCCEEEEChH
Confidence 2222211 23566677666543 334544 36788888873 89999999764
No 76
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=66.42 E-value=17 Score=35.90 Aligned_cols=115 Identities=13% Similarity=0.122 Sum_probs=65.7
Q ss_pred CchhHhHHHHHhCCcEEEEcCc--c-hhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCC
Q 015764 58 ESKQVMTAAVERGWNTFVFLSE--N-QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAE 134 (401)
Q Consensus 58 ~~K~~vt~AlEsG~~~~v~~~~--~-~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~ 134 (401)
+..+.+..++|.|+|.++++.. + ....+.+..+....| +.++ ....+.++++...+.. ..+|
T Consensus 108 ~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p------------~v~V-i~G~v~t~e~A~~a~~--aGAD 172 (366)
T 4fo4_A 108 GNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYP------------HLEI-IGGNVATAEGARALIE--AGVS 172 (366)
T ss_dssp TCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCT------------TCEE-EEEEECSHHHHHHHHH--HTCS
T ss_pred hHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcC------------CCce-EeeeeCCHHHHHHHHH--cCCC
Confidence 4578899999999998887432 1 112121222211000 2222 1235888888666543 3689
Q ss_pred eEEEe---C--------CCCeeee----hhhhhhcccCCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 135 NIVID---L--------PDWQVIP----AENIVASFQGSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 135 ~vvv~---~--------~DW~iIP----lENliA~~q~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
++++- + .+|- +| +.++.+.+...+..|++ .+.+..++.. +|..|+|||.+-+.
T Consensus 173 ~I~vG~gpGs~~~tr~~~g~g-~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~k---ala~GAd~V~vGs~ 242 (366)
T 4fo4_A 173 AVKVGIGPGSICTTRIVTGVG-VPQITAIADAAGVANEYGIPVIADGGIRFSGDISK---AIAAGASCVMVGSM 242 (366)
T ss_dssp EEEECSSCSTTBCHHHHHCCC-CCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHH---HHHTTCSEEEESTT
T ss_pred EEEEecCCCCCCCcccccCcc-cchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHH---HHHcCCCEEEEChH
Confidence 99982 0 1232 23 23333332333567888 7888888654 55679999998765
No 77
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=66.41 E-value=3.2 Score=43.36 Aligned_cols=134 Identities=16% Similarity=0.161 Sum_probs=85.1
Q ss_pred CchhHh-HHHHHhCCcEEEEcC-cchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCe
Q 015764 58 ESKQVM-TAAVERGWNTFVFLS-ENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAEN 135 (401)
Q Consensus 58 ~~K~~v-t~AlEsG~~~~v~~~-~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~ 135 (401)
+|++-+ .-|+|.|+|.+.++. .+++.+.++.++ +.+.|+.+..+.+|.+++-++.+..-....|-
T Consensus 217 kD~~dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~-------------l~~~g~~i~IIAKIE~~eav~nldeIl~~sDG 283 (520)
T 3khd_A 217 KDKNDILNFAIPMGCNFIAASFIQSADDVRLIRNL-------------LGPRGRHIKIIPKIENIEGIIHFDKILAESDG 283 (520)
T ss_dssp HHHHHHHHTHHHHTCCEEEETTCCSHHHHHHHHHH-------------HTTTTTTSEEEEEECSHHHHHTHHHHHHHSSC
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHH-------------HHhcCCCCcEEEEECCHHHHHhHHHHHHhCCc
Confidence 456666 999999999877764 234444444443 33445567788899999988876665555688
Q ss_pred EEEeCCCCe-eeehhhhh-------hcccCCCceEEE-----------EcCCHHHHHHHHHHhhcccCeEEEecCC----
Q 015764 136 IVIDLPDWQ-VIPAENIV-------ASFQGSGKTVFA-----------ISKTPSEAQIFLEALEQGLGGIVLKVED---- 192 (401)
Q Consensus 136 vvv~~~DW~-iIPlENli-------A~~q~~~~~l~a-----------~v~~~~eA~~al~~LE~G~DGVvl~~~d---- 192 (401)
++|-..|-- =||+|.+- .+....+.-++. ...+-.|+--...+.--|+|+|+|..+.
T Consensus 284 IMVARGDLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~ATQMLeSMi~~p~PTRAEvsDVanAVldGaDavMLSgETA~G~ 363 (520)
T 3khd_A 284 IMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPIITATQMLESMTKNPRPTRAEVTDVANAVLDGTDCVMLSGETAGGK 363 (520)
T ss_dssp EEECHHHHTTTSCGGGHHHHHHHHHHHHHHHTCCEEECCCCCGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHSCS
T ss_pred EEEccccccccCCHHHHHHHHHHHHHHHHHcCCCeEEeehhhHHHhcCCCccHHHHHHHHHHHHhCCCEEEecccccCCc
Confidence 888433321 24766643 222222223332 1245688888899999999999996432
Q ss_pred -H-HHHHHHHHhhc
Q 015764 193 -V-KAVLALKEYFD 204 (401)
Q Consensus 193 -~-~ev~~l~~~~~ 204 (401)
| +.|+-+.+++.
T Consensus 364 yPveaV~~M~~I~~ 377 (520)
T 3khd_A 364 FPVEAVTIMSKICL 377 (520)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 3 56666666664
No 78
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=66.41 E-value=24 Score=29.79 Aligned_cols=80 Identities=15% Similarity=0.110 Sum_probs=47.0
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC--CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG--SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~--~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (401)
...+.++.-... ...|.++++..-.. ..--.++..+.. ....++......+ ......+++.|++|++.+|-++
T Consensus 30 ~~~~~~~al~~~---~~~dlvllD~~lp~-~~g~~~~~~lr~~~~~~~ii~lt~~~~-~~~~~~~~~~ga~~~l~Kp~~~ 104 (220)
T 1p2f_A 30 TFLTGEDFLNDE---EAFHVVVLDVMLPD-YSGYEICRMIKETRPETWVILLTLLSD-DESVLKGFEAGADDYVTKPFNP 104 (220)
T ss_dssp EESSHHHHHHCC---SCCSEEEEESBCSS-SBHHHHHHHHHHHCTTSEEEEEESCCS-HHHHHHHHHHTCSEEEESSCCH
T ss_pred EECCHHHHHHhc---CCCCEEEEeCCCCC-CCHHHHHHHHHhcCCCCcEEEEEcCCC-HHHHHHHHHcCCCEEEECCCCH
Confidence 355655433322 46788888543222 111223333322 3556666655433 4456788999999999999999
Q ss_pred HHHHHHH
Q 015764 194 KAVLALK 200 (401)
Q Consensus 194 ~ev~~l~ 200 (401)
+++.+.-
T Consensus 105 ~~L~~~i 111 (220)
T 1p2f_A 105 EILLARV 111 (220)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8876543
No 79
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=66.28 E-value=13 Score=34.60 Aligned_cols=82 Identities=20% Similarity=0.098 Sum_probs=50.2
Q ss_pred Chhhhhhhcccc--CCCCeEEEeCCCCeeeehhh---hhhcccCCCceEEEEcC--CHHHHHHHH-HHhhcccCeEEE--
Q 015764 119 TPQELQQLQPAD--GQAENIVIDLPDWQVIPAEN---IVASFQGSGKTVFAISK--TPSEAQIFL-EALEQGLGGIVL-- 188 (401)
Q Consensus 119 ~~e~~e~~~~~~--~~~~~vvv~~~DW~iIPlEN---liA~~q~~~~~l~a~v~--~~~eA~~al-~~LE~G~DGVvl-- 188 (401)
+++...+++... ..+||+-+.+. ..+|. +.+.....+...+..++ +.+++...+ .+++.|++|+..
T Consensus 157 s~~~i~~a~~~a~~~GAD~vkt~~~----~~~e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~Gvsvgr 232 (263)
T 1w8s_A 157 APEIVAYAARIALELGADAMKIKYT----GDPKTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGR 232 (263)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECC----SSHHHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCC----CCHHHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEeh
Confidence 566655543322 35899998753 13343 33333222556666677 888887555 688999999965
Q ss_pred ---ecCCH-HHHHHHHHhhc
Q 015764 189 ---KVEDV-KAVLALKEYFD 204 (401)
Q Consensus 189 ---~~~d~-~ev~~l~~~~~ 204 (401)
..+|| ..+++|++++.
T Consensus 233 aI~~~~dp~~~~~~l~~~v~ 252 (263)
T 1w8s_A 233 NVWQRRDALKFARALAELVY 252 (263)
T ss_dssp HHHTSTTHHHHHHHHHHHHC
T ss_pred hhcCCcCHHHHHHHHHHHHh
Confidence 55676 45566666653
No 80
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=66.27 E-value=29 Score=27.37 Aligned_cols=82 Identities=10% Similarity=0.111 Sum_probs=46.4
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcc-cCeEEEecCC
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQG-LGGIVLKVED 192 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G-~DGVvl~~~d 192 (401)
...+.++.-.........+.++++..-... .--.++..+. .....++... +..+......+++.| +++++.+|-+
T Consensus 32 ~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~-~g~~~~~~l~~~~~~~~ii~~s-~~~~~~~~~~~~~~g~~~~~l~KP~~ 109 (151)
T 3kcn_A 32 TCESGPEALACIKKSDPFSVIMVDMRMPGM-EGTEVIQKARLISPNSVYLMLT-GNQDLTTAMEAVNEGQVFRFLNKPCQ 109 (151)
T ss_dssp EESSHHHHHHHHHHSCCCSEEEEESCCSSS-CHHHHHHHHHHHCSSCEEEEEE-CGGGHHHHHHHHHHTCCSEEEESSCC
T ss_pred EeCCHHHHHHHHHcCCCCCEEEEeCCCCCC-cHHHHHHHHHhcCCCcEEEEEE-CCCCHHHHHHHHHcCCeeEEEcCCCC
Confidence 355555433333222224778885432221 1112232222 2344555544 445566778899999 9999999999
Q ss_pred HHHHHHH
Q 015764 193 VKAVLAL 199 (401)
Q Consensus 193 ~~ev~~l 199 (401)
++++.+.
T Consensus 110 ~~~L~~~ 116 (151)
T 3kcn_A 110 MSDIKAA 116 (151)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887654
No 81
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=66.15 E-value=10 Score=33.77 Aligned_cols=113 Identities=7% Similarity=0.030 Sum_probs=60.5
Q ss_pred eCchhHhHHHHHhCCcEEEEcCcchhhH-----hhccceeee--eeeeecCCccccCCCCeeEEEEEecChhhhhhhccc
Q 015764 57 TESKQVMTAAVERGWNTFVFLSENQQLA-----IDWSTIALL--DPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPA 129 (401)
Q Consensus 57 ~~~K~~vt~AlEsG~~~~v~~~~~~~~~-----~~~~~i~~i--~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~ 129 (401)
.+-.++...+.+.|++.+-+...+.... ..+..+... -|+...+ -|.++++.+.+...
T Consensus 32 ~d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~~~i~~i~~~~~ipv~v~g---------------gI~~~~~~~~~l~~ 96 (244)
T 1vzw_A 32 GSPLEAALAWQRSGAEWLHLVDLDAAFGTGDNRALIAEVAQAMDIKVELSG---------------GIRDDDTLAAALAT 96 (244)
T ss_dssp CCHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCHHHHHHHHHHCSSEEEEES---------------SCCSHHHHHHHHHT
T ss_pred CCHHHHHHHHHHcCCCEEEEecCchhhcCCChHHHHHHHHHhcCCcEEEEC---------------CcCCHHHHHHHHHc
Confidence 4456788888999999887653221111 111111110 1222222 26788887766542
Q ss_pred cCCCCeEEEeCCCCeeee--hhhhhhcccCCCceEEEEcC----------------CHHHHHHHHHHhhcccCeEEEecC
Q 015764 130 DGQAENIVIDLPDWQVIP--AENIVASFQGSGKTVFAISK----------------TPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 130 ~~~~~~vvv~~~DW~iIP--lENliA~~q~~~~~l~a~v~----------------~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
.++.+++....-+- | ++.++..+. .+++..++ ++ .+.+..+++.|+|.|++.+-
T Consensus 97 --Gad~V~lg~~~l~~-p~~~~~~~~~~g---~~~~~~l~~~~g~v~~~g~~~~~~~~--~e~~~~~~~~G~~~i~~~~~ 168 (244)
T 1vzw_A 97 --GCTRVNLGTAALET-PEWVAKVIAEHG---DKIAVGLDVRGTTLRGRGWTRDGGDL--YETLDRLNKEGCARYVVTDI 168 (244)
T ss_dssp --TCSEEEECHHHHHC-HHHHHHHHHHHG---GGEEEEEEEETTEECCSSSCCCCCBH--HHHHHHHHHTTCCCEEEEEC
T ss_pred --CCCEEEECchHhhC-HHHHHHHHHHcC---CcEEEEEEccCCEEEEcCcccCCCCH--HHHHHHHHhCCCCEEEEecc
Confidence 58888884432111 2 556666542 23322222 33 33455667789999999874
Q ss_pred C
Q 015764 192 D 192 (401)
Q Consensus 192 d 192 (401)
+
T Consensus 169 ~ 169 (244)
T 1vzw_A 169 A 169 (244)
T ss_dssp -
T ss_pred C
Confidence 4
No 82
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=65.50 E-value=25 Score=33.13 Aligned_cols=107 Identities=11% Similarity=0.068 Sum_probs=61.9
Q ss_pred hhHhHHHHHhCCcEEEEcCcc-hhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEE
Q 015764 60 KQVMTAAVERGWNTFVFLSEN-QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVI 138 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~~-~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vvv 138 (401)
.+.+..+++.|++.+.+.-++ .+..+.+.+ .|.++. ..+.+.++...+. ...+|.+++
T Consensus 86 ~~~~~~~~~~g~d~V~~~~g~p~~~~~~l~~-----------------~gi~vi--~~v~t~~~a~~~~--~~GaD~i~v 144 (328)
T 2gjl_A 86 AEYRAAIIEAGIRVVETAGNDPGEHIAEFRR-----------------HGVKVI--HKCTAVRHALKAE--RLGVDAVSI 144 (328)
T ss_dssp HHHHHHHHHTTCCEEEEEESCCHHHHHHHHH-----------------TTCEEE--EEESSHHHHHHHH--HTTCSEEEE
T ss_pred HHHHHHHHhcCCCEEEEcCCCcHHHHHHHHH-----------------cCCCEE--eeCCCHHHHHHHH--HcCCCEEEE
Confidence 578999999999998876432 223322221 133332 4577877644433 235899998
Q ss_pred eCCC------CeeeehhhhhhcccCC-CceEEEE--cCCHHHHHHHHHHhhcccCeEEEec
Q 015764 139 DLPD------WQVIPAENIVASFQGS-GKTVFAI--SKTPSEAQIFLEALEQGLGGIVLKV 190 (401)
Q Consensus 139 ~~~D------W~iIPlENliA~~q~~-~~~l~a~--v~~~~eA~~al~~LE~G~DGVvl~~ 190 (401)
.... ...+|.-.++.++... +..|++. +++.+++..++ +.|+|||.+-+
T Consensus 145 ~g~~~GG~~G~~~~~~~~~l~~v~~~~~iPviaaGGI~~~~~v~~al---~~GAdgV~vGs 202 (328)
T 2gjl_A 145 DGFECAGHPGEDDIPGLVLLPAAANRLRVPIIASGGFADGRGLVAAL---ALGADAINMGT 202 (328)
T ss_dssp ECTTCSBCCCSSCCCHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHH---HHTCSEEEESH
T ss_pred ECCCCCcCCCCccccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHH---HcCCCEEEECH
Confidence 6531 1123444555554322 3345543 56677766555 46999999864
No 83
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=65.48 E-value=6.7 Score=40.65 Aligned_cols=38 Identities=16% Similarity=0.193 Sum_probs=30.5
Q ss_pred eeecCCceeEEEecCCceeeeeeccCCCeEEEEcCCCCe
Q 015764 274 RVNAGPVHAYVLVPGGKTCYLSELKSGKEVIVVDQKGRQ 312 (401)
Q Consensus 274 RVNAGaVHaYv~~pggkT~YLSEL~sG~eVLvVd~~G~t 312 (401)
.+||.+.=+|+.. |...+.+|-.++.-.|+++..+-++
T Consensus 392 ~~~a~aIv~~T~s-G~ta~~isr~RP~~pI~a~t~~~~~ 429 (500)
T 1a3w_A 392 EQKAKAIIVLSTS-GTTPRLVSKYRPNCPIILVTRCPRA 429 (500)
T ss_dssp HHTCSCEEEECSS-SHHHHHHHHTCCSSCEEEEESCTTH
T ss_pred hcCCCEEEEECCC-chHHHHHHhhCCCCCEEEEcCCHHH
Confidence 3678877777775 7777889999999999999887654
No 84
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=65.18 E-value=29 Score=27.66 Aligned_cols=85 Identities=13% Similarity=0.135 Sum_probs=48.0
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
...+.++.-.... ....+.+|++..-.. ..--.++..+.. ....++...... +......+++.|+++++.+|-
T Consensus 36 ~~~~~~~al~~l~-~~~~dlii~D~~l~~-~~g~~~~~~lr~~~~~~~~pii~~s~~~-~~~~~~~~~~~g~~~~l~KP~ 112 (154)
T 3gt7_A 36 HVRNGREAVRFLS-LTRPDLIISDVLMPE-MDGYALCRWLKGQPDLRTIPVILLTILS-DPRDVVRSLECGADDFITKPC 112 (154)
T ss_dssp EESSHHHHHHHHT-TCCCSEEEEESCCSS-SCHHHHHHHHHHSTTTTTSCEEEEECCC-SHHHHHHHHHHCCSEEEESSC
T ss_pred EeCCHHHHHHHHH-hCCCCEEEEeCCCCC-CCHHHHHHHHHhCCCcCCCCEEEEECCC-ChHHHHHHHHCCCCEEEeCCC
Confidence 3556555333332 234778888654221 112223333322 344566655433 344567788999999999999
Q ss_pred CHHHHHHH-HHhh
Q 015764 192 DVKAVLAL-KEYF 203 (401)
Q Consensus 192 d~~ev~~l-~~~~ 203 (401)
++.++.+. +.++
T Consensus 113 ~~~~l~~~i~~~l 125 (154)
T 3gt7_A 113 KDVVLASHVKRLL 125 (154)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 99877653 3444
No 85
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=64.85 E-value=23 Score=27.17 Aligned_cols=40 Identities=13% Similarity=0.155 Sum_probs=29.2
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
...++...... +......+++.|+++.+.+|-+++++.+.
T Consensus 81 ~~pii~~s~~~-~~~~~~~~~~~g~~~~l~KP~~~~~L~~~ 120 (129)
T 3h1g_A 81 EIPIIMITAEG-GKAEVITALKAGVNNYIVKPFTPQVLKEK 120 (129)
T ss_dssp TCCEEEEESCC-SHHHHHHHHHHTCCEEEESCCCHHHHHHH
T ss_pred CCeEEEEeCCC-ChHHHHHHHHcCccEEEeCCCCHHHHHHH
Confidence 34566655543 33456678999999999999999887644
No 86
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=64.83 E-value=15 Score=34.03 Aligned_cols=103 Identities=11% Similarity=0.083 Sum_probs=61.6
Q ss_pred hhHhHHHHHhCCcEEEEcCcch------------h---hHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhh
Q 015764 60 KQVMTAAVERGWNTFVFLSENQ------------Q---LAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQ 124 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~~~------------~---~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e 124 (401)
.+.+..|++.|++.|.++..+. + +++++..+. +..| +.+-|.+.-++
T Consensus 46 ~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~-------------~~~~----~~liInd~~~l- 107 (243)
T 3o63_A 46 AQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAA-------------HRYG----ALFAVNDRADI- 107 (243)
T ss_dssp HHHHHHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHH-------------HHTT----CEEEEESCHHH-
T ss_pred HHHHHHHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHH-------------HhhC----CEEEEeCHHHH-
Confidence 5788999999999999976431 1 222222221 1112 22345555543
Q ss_pred hhccccCCCCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEec
Q 015764 125 QLQPADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKV 190 (401)
Q Consensus 125 ~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~ 190 (401)
+... .++-|-+...|. |.+.+-.. .+....|-..+.|.+|++.+ .+.|+|-|.+.|
T Consensus 108 --A~~~-gAdGVHLg~~dl---~~~~~r~~-~~~~~~iG~S~ht~~Ea~~A---~~~GaDyI~vgp 163 (243)
T 3o63_A 108 --ARAA-GADVLHLGQRDL---PVNVARQI-LAPDTLIGRSTHDPDQVAAA---AAGDADYFCVGP 163 (243)
T ss_dssp --HHHH-TCSEEEECTTSS---CHHHHHHH-SCTTCEEEEEECSHHHHHHH---HHSSCSEEEECC
T ss_pred --HHHh-CCCEEEecCCcC---CHHHHHHh-hCCCCEEEEeCCCHHHHHHH---hhCCCCEEEEcC
Confidence 2222 456777755554 54443332 23455677788999997654 568999999954
No 87
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=64.67 E-value=3.4 Score=43.87 Aligned_cols=134 Identities=13% Similarity=0.195 Sum_probs=86.2
Q ss_pred CchhHhHHHHHhCCcEEEEcC-cchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeE
Q 015764 58 ESKQVMTAAVERGWNTFVFLS-ENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENI 136 (401)
Q Consensus 58 ~~K~~vt~AlEsG~~~~v~~~-~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~v 136 (401)
+|++.+.-|+|.|+|.+.++. .+++.++++.++ +.+.|..+..+.+|.+++-++.+..-....|-+
T Consensus 194 kD~~dl~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~-------------l~~~~~~i~IiaKIE~~eav~nldeIl~~sDGI 260 (606)
T 3t05_A 194 KDAEDIRFGIKENVDFIAASFVRRPSDVLEIREI-------------LEEQKANISVFPKIENQEGIDNIEEILEVSDGL 260 (606)
T ss_dssp HHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHH-------------HHHTTCCCEEEECCCSHHHHHTHHHHHHHCSCE
T ss_pred hHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHH-------------HHhcCCCCeEEEEeCCHHHHHhHHHHHHhCCEE
Confidence 578889999999999777653 234444444432 333445677888999999887776655557888
Q ss_pred EEeCCCCe-eeehhhh-------hhcccCCCceEEE-----------EcCCHHHHHHHHHHhhcccCeEEEecCC-----
Q 015764 137 VIDLPDWQ-VIPAENI-------VASFQGSGKTVFA-----------ISKTPSEAQIFLEALEQGLGGIVLKVED----- 192 (401)
Q Consensus 137 vv~~~DW~-iIPlENl-------iA~~q~~~~~l~a-----------~v~~~~eA~~al~~LE~G~DGVvl~~~d----- 192 (401)
+|-.-|-- =||+|++ |.+....+.-++. ...+-.|+--...+.--|+|+|+|..+.
T Consensus 261 mVARGDLgvei~~e~vp~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAv~dGaDavMLSgETA~G~y 340 (606)
T 3t05_A 261 MVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLY 340 (606)
T ss_dssp EEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGTTCSSCCHHHHHHHHHHHHHTCSEEEECHHHHSCSC
T ss_pred EEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHcCCCEEEecccccCCCC
Confidence 88433332 2556654 3332222233443 1245578888899999999999998432
Q ss_pred -HHHHHHHHHhhc
Q 015764 193 -VKAVLALKEYFD 204 (401)
Q Consensus 193 -~~ev~~l~~~~~ 204 (401)
.+.|+-+.+++.
T Consensus 341 PveaV~~m~~I~~ 353 (606)
T 3t05_A 341 PEEAVKTMRNIAV 353 (606)
T ss_dssp SHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 366666666654
No 88
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=63.81 E-value=11 Score=33.05 Aligned_cols=101 Identities=19% Similarity=0.208 Sum_probs=58.2
Q ss_pred eEEEEEEEEEcCCc-ceEEEeecC-----CCCCCceEEEeccCceEEEEeeccccCCCCCCCCeeee----cCCceeEEE
Q 015764 216 MKATVTRVDVAGMG-DRVCVDLCS-----LMRPGEGLLVGSFARGLFLVHSECLESNYIASRPFRVN----AGPVHAYVL 285 (401)
Q Consensus 216 ~~atVt~V~~vGmG-DRVCVDtcs-----ll~~GEGmLVGS~s~glFLVhsEt~es~Yva~RPFRVN----AGaVHaYv~ 285 (401)
.+++|++++.+.-. -|+.+.... -+.||+=+.+ +-.....++...|||=+- .+.+.=++.
T Consensus 4 ~~~~V~~~~~~~~~~~~~~l~~~~~~~~~~~~pGq~v~l----------~~~~~~~~~~~~R~ySi~s~~~~~~~~i~vk 73 (243)
T 4eh1_A 4 RTFVVREKQVESAYVTSFVLVPADGGAVLDYQPGQYIGI----------EVTPEGSDYREIRQYSLSHASNGREYRISVK 73 (243)
T ss_dssp EEEEEEEEEECSSSEEEEEEEESSCSCCCCCCTTCEEEE----------EECCSSCSSCEEEEEEBCSCCCSSCEEEEEE
T ss_pred EEEEEEEEEEcCCCeEEEEEEeCCCCcCCCcCCCCEEEE----------EEecCCCccccceeeEeccCCCCCeEEEEEE
Confidence 57888888887532 234444322 2445553332 111111122234555552 244555555
Q ss_pred ec-------CCceeeee-eccCCCeEEEEcCCCCeeEEeeeeEEEeccceeEEEE
Q 015764 286 VP-------GGKTCYLS-ELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEA 332 (401)
Q Consensus 286 ~p-------ggkT~YLS-EL~sG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLVeA 332 (401)
.- |.-|+||. .|+.||+|.+-...|+...- -..+|++||=+
T Consensus 74 ~~~~~~~~~G~~S~~l~~~l~~G~~v~v~gP~G~~~~~------~~~~~~vliag 122 (243)
T 4eh1_A 74 REGVGSDNPGLVSHYLHNNVKVGDSVKLYAPAGDFFYV------ERERPVVLISA 122 (243)
T ss_dssp CTTTTSSSCCHHHHHHHHHCCTTCEEEEEEEECSCCCC------CCSSCEEEEEE
T ss_pred EeecCCCCCCeehhHHHhcCCCCCEEEEEccCcccCcC------CCCCCEEEEEc
Confidence 43 44599996 69999999998888875421 24678888855
No 89
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=63.34 E-value=35 Score=26.00 Aligned_cols=82 Identities=13% Similarity=0.163 Sum_probs=47.0
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCe----eeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEe
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQ----VIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLK 189 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~----iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~ 189 (401)
...+.++....... ...+.+|++..-.. -..--.++..+. .....++..... .+......+++.|+++++.+
T Consensus 32 ~~~~~~~a~~~l~~-~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~-~~~~~~~~~~~~g~~~~l~k 109 (140)
T 2qr3_A 32 TLSSPVSLSTVLRE-ENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAY-ADIDLAVRGIKEGASDFVVK 109 (140)
T ss_dssp EECCHHHHHHHHHH-SCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEG-GGHHHHHHHHHTTCCEEEEE
T ss_pred EeCCHHHHHHHHHc-CCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECC-CCHHHHHHHHHcCchheeeC
Confidence 35565553333322 24677777543220 122223333332 234556665544 34566778899999999999
Q ss_pred cCCHHHHHHH
Q 015764 190 VEDVKAVLAL 199 (401)
Q Consensus 190 ~~d~~ev~~l 199 (401)
|-+++++.+.
T Consensus 110 p~~~~~l~~~ 119 (140)
T 2qr3_A 110 PWDNQKLLET 119 (140)
T ss_dssp SCCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 9999877644
No 90
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=63.02 E-value=29 Score=27.70 Aligned_cols=116 Identities=9% Similarity=0.018 Sum_probs=66.1
Q ss_pred CcEEEEEeC---chhHhHHHHHhCCcEEEEcCcchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhh
Q 015764 50 PKRVWIWTE---SKQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQL 126 (401)
Q Consensus 50 ~K~vWiw~~---~K~~vt~AlEsG~~~~v~~~~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~ 126 (401)
++.+.|-=- -..+.....+.|++-++++.+ .+..+.+..- |.. ..+...++++.++.+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~-~~~~~~~~~~-----------------~~~-~~~gd~~~~~~l~~~ 66 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS-KEKIELLEDE-----------------GFD-AVIADPTDESFYRSL 66 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC-HHHHHHHHHT-----------------TCE-EEECCTTCHHHHHHS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECC-HHHHHHHHHC-----------------CCc-EEECCCCCHHHHHhC
Confidence 345555321 356677777889987777664 4444433321 110 122345666665554
Q ss_pred ccccCCCCeEEEeCCCCee-eehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 127 QPADGQAENIVIDLPDWQV-IPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 127 ~~~~~~~~~vvv~~~DW~i-IPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
....++.+|+...|... +-+- ..|+-.+ ..++++.+++.+.++.+ .+.|+|-|+.+..
T Consensus 67 --~~~~~d~vi~~~~~~~~n~~~~-~~a~~~~-~~~iia~~~~~~~~~~l---~~~G~~~vi~p~~ 125 (141)
T 3llv_A 67 --DLEGVSAVLITGSDDEFNLKIL-KALRSVS-DVYAIVRVSSPKKKEEF---EEAGANLVVLVAD 125 (141)
T ss_dssp --CCTTCSEEEECCSCHHHHHHHH-HHHHHHC-CCCEEEEESCGGGHHHH---HHTTCSEEEEHHH
T ss_pred --CcccCCEEEEecCCHHHHHHHH-HHHHHhC-CceEEEEEcChhHHHHH---HHcCCCEEECHHH
Confidence 23467888885554321 1111 1122223 66899999999988765 4679998876554
No 91
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=62.98 E-value=26 Score=29.52 Aligned_cols=81 Identities=12% Similarity=0.132 Sum_probs=48.2
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC--CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG--SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~--~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (401)
...+.++.-.... ....|.++++..-... .--.++..+.. ....++...... +......+++.|++|++.+|-++
T Consensus 31 ~~~~~~~a~~~~~-~~~~dlvllD~~l~~~-~g~~~~~~lr~~~~~~~ii~ls~~~-~~~~~~~~~~~ga~~~l~Kp~~~ 107 (225)
T 1kgs_A 31 VCYDGEEGMYMAL-NEPFDVVILDIMLPVH-DGWEILKSMRESGVNTPVLMLTALS-DVEYRVKGLNMGADDYLPKPFDL 107 (225)
T ss_dssp EESSHHHHHHHHH-HSCCSEEEEESCCSSS-CHHHHHHHHHHTTCCCCEEEEESSC-HHHHHHHTCCCCCSEEEESSCCH
T ss_pred EECCHHHHHHHHh-cCCCCEEEEeCCCCCC-CHHHHHHHHHhcCCCCCEEEEeCCC-CHHHHHHHHhCCccEEEeCCCCH
Confidence 3556555333322 2356888886443221 12233443322 345666655443 45567789999999999999999
Q ss_pred HHHHHH
Q 015764 194 KAVLAL 199 (401)
Q Consensus 194 ~ev~~l 199 (401)
+++.+.
T Consensus 108 ~~l~~~ 113 (225)
T 1kgs_A 108 RELIAR 113 (225)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887654
No 92
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=62.58 E-value=33 Score=29.41 Aligned_cols=103 Identities=15% Similarity=0.101 Sum_probs=56.3
Q ss_pred chhHhHHHHHhCCcEEEEcCcc------hhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCC
Q 015764 59 SKQVMTAAVERGWNTFVFLSEN------QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQ 132 (401)
Q Consensus 59 ~K~~vt~AlEsG~~~~v~~~~~------~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~ 132 (401)
-.+.+..+++.|++.+-+...+ .+.++++.++. +.-+ +..++. ++.+.+ ... .
T Consensus 28 ~~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~-------------~~~~--v~v~v~----~~~~~a-~~~-g 86 (215)
T 1xi3_A 28 EVESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLT-------------REYD--ALFFVD----DRVDVA-LAV-D 86 (215)
T ss_dssp HHHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHH-------------HHTT--CEEEEE----SCHHHH-HHH-T
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHH-------------HHcC--CeEEEc----ChHHHH-HHc-C
Confidence 3688999999999998775321 12222222211 0111 122221 232222 222 5
Q ss_pred CCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEec
Q 015764 133 AENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKV 190 (401)
Q Consensus 133 ~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~ 190 (401)
++.+.+...|. |.+.+ .++. .+..+...+.+.+|++. +.+.|+|.|++.+
T Consensus 87 ad~v~l~~~~~---~~~~~-~~~~-~~~~~~v~~~t~~e~~~---~~~~g~d~i~~~~ 136 (215)
T 1xi3_A 87 ADGVQLGPEDM---PIEVA-KEIA-PNLIIGASVYSLEEALE---AEKKGADYLGAGS 136 (215)
T ss_dssp CSEEEECTTSC---CHHHH-HHHC-TTSEEEEEESSHHHHHH---HHHHTCSEEEEEC
T ss_pred CCEEEECCccC---CHHHH-HHhC-CCCEEEEecCCHHHHHH---HHhcCCCEEEEcC
Confidence 78888865554 34433 3332 23345556789988764 5678999999854
No 93
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=62.43 E-value=24 Score=31.36 Aligned_cols=28 Identities=14% Similarity=0.183 Sum_probs=21.2
Q ss_pred EEEEEe--CchhHhHHHHHhCCcEEEEcCc
Q 015764 52 RVWIWT--ESKQVMTAAVERGWNTFVFLSE 79 (401)
Q Consensus 52 ~vWiw~--~~K~~vt~AlEsG~~~~v~~~~ 79 (401)
.+++-- .+.+.+..+++.|+|.+++..+
T Consensus 77 pv~v~ggI~~~~~~~~~l~~Gad~V~lg~~ 106 (244)
T 1vzw_A 77 KVELSGGIRDDDTLAAALATGCTRVNLGTA 106 (244)
T ss_dssp EEEEESSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred cEEEECCcCCHHHHHHHHHcCCCEEEECch
Confidence 466632 3567799999999999998764
No 94
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=62.37 E-value=25 Score=26.88 Aligned_cols=81 Identities=12% Similarity=0.213 Sum_probs=44.5
Q ss_pred ecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC---CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 015764 117 VSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG---SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (401)
Q Consensus 117 v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~---~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (401)
..+.++...........+.++++..-.. ..--.++..+.. ....++...... +......+++.|+++++.+|-++
T Consensus 37 ~~~~~~a~~~~~~~~~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~~~ii~~s~~~-~~~~~~~~~~~g~~~~l~KP~~~ 114 (136)
T 3hdv_A 37 ADGAEEARLYLHYQKRIGLMITDLRMQP-ESGLDLIRTIRASERAALSIIVVSGDT-DVEEAVDVMHLGVVDFLLKPVDL 114 (136)
T ss_dssp ESSHHHHHHHHHHCTTEEEEEECSCCSS-SCHHHHHHHHHTSTTTTCEEEEEESSC-CHHHHHHHHHTTCSEEEESSCCH
T ss_pred eCCHHHHHHHHHhCCCCcEEEEeccCCC-CCHHHHHHHHHhcCCCCCCEEEEeCCC-ChHHHHHHHhCCcceEEeCCCCH
Confidence 4454443332222222566666432111 122234444332 334566555543 34566788999999999999999
Q ss_pred HHHHHH
Q 015764 194 KAVLAL 199 (401)
Q Consensus 194 ~ev~~l 199 (401)
+++.+.
T Consensus 115 ~~l~~~ 120 (136)
T 3hdv_A 115 GKLLEL 120 (136)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877643
No 95
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=62.30 E-value=38 Score=25.24 Aligned_cols=79 Identities=11% Similarity=0.161 Sum_probs=45.0
Q ss_pred ecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC-CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHH
Q 015764 117 VSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG-SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKA 195 (401)
Q Consensus 117 v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~-~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~e 195 (401)
..+.++...... ....+.++++..-.. ..--.++..+.. ....++...... +......+++.|+++.+.+|-++++
T Consensus 32 ~~~~~~~~~~~~-~~~~dlvi~d~~l~~-~~g~~~~~~l~~~~~~~ii~~s~~~-~~~~~~~~~~~ga~~~l~Kp~~~~~ 108 (122)
T 1zgz_A 32 TASGAGLREIMQ-NQSVDLILLDINLPD-ENGLMLTRALRERSTVGIILVTGRS-DRIDRIVGLEMGADDYVTKPLELRE 108 (122)
T ss_dssp ESSHHHHHHHHH-HSCCSEEEEESCCSS-SCHHHHHHHHHTTCCCEEEEEESSC-CHHHHHHHHHHTCSEEEESSCCHHH
T ss_pred ecCHHHHHHHHh-cCCCCEEEEeCCCCC-CChHHHHHHHHhcCCCCEEEEECCC-ChhhHHHHHHhCHHHHccCCCCHHH
Confidence 445544333222 234677777543221 122234444433 244566555443 3345677899999999999999887
Q ss_pred HHH
Q 015764 196 VLA 198 (401)
Q Consensus 196 v~~ 198 (401)
+.+
T Consensus 109 l~~ 111 (122)
T 1zgz_A 109 LVV 111 (122)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 96
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=62.10 E-value=17 Score=34.34 Aligned_cols=71 Identities=17% Similarity=0.205 Sum_probs=48.0
Q ss_pred ecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCC
Q 015764 117 VSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192 (401)
Q Consensus 117 v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d 192 (401)
+.++.+++++.. ..+|.|++-..+-..--++.++..+..-+-.++..++|.+|++.++ +.|+|-|-+.+.|
T Consensus 122 iid~~qv~~A~~--~GAD~VlLi~a~l~~~~l~~l~~~a~~lGl~~lvev~t~ee~~~A~---~~Gad~IGv~~r~ 192 (272)
T 3qja_A 122 VVQPYQIHEARA--HGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVHTEQEADRAL---KAGAKVIGVNARD 192 (272)
T ss_dssp CCSHHHHHHHHH--TTCSEEEEEGGGSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH---HHTCSEEEEESBC
T ss_pred ccCHHHHHHHHH--cCCCEEEEecccCCHHHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH---HCCCCEEEECCCc
Confidence 456666555432 3678888744332222355666666555667899999999988765 5699999998654
No 97
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=62.07 E-value=40 Score=25.69 Aligned_cols=80 Identities=11% Similarity=0.075 Sum_probs=47.1
Q ss_pred ecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCC
Q 015764 117 VSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192 (401)
Q Consensus 117 v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d 192 (401)
..+.++.-..... ...+.++++..-.. ..--.++..+.. ....++......+ ......+++.|+++++.+|-+
T Consensus 40 ~~~~~~a~~~l~~-~~~dlii~d~~l~~-~~g~~~~~~l~~~~~~~~~~ii~~s~~~~-~~~~~~~~~~g~~~~l~kP~~ 116 (143)
T 3cnb_A 40 AYNPFDAGDLLHT-VKPDVVMLDLMMVG-MDGFSICHRIKSTPATANIIVIAMTGALT-DDNVSRIVALGAETCFGKPLN 116 (143)
T ss_dssp ECSHHHHHHHHHH-TCCSEEEEETTCTT-SCHHHHHHHHHTSTTTTTSEEEEEESSCC-HHHHHHHHHTTCSEEEESSCC
T ss_pred ECCHHHHHHHHHh-cCCCEEEEecccCC-CcHHHHHHHHHhCccccCCcEEEEeCCCC-HHHHHHHHhcCCcEEEeCCCC
Confidence 4555543332222 24677887643221 222234444433 3456766655443 445678899999999999999
Q ss_pred HHHHHHH
Q 015764 193 VKAVLAL 199 (401)
Q Consensus 193 ~~ev~~l 199 (401)
++++.+.
T Consensus 117 ~~~l~~~ 123 (143)
T 3cnb_A 117 FTLLEKT 123 (143)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887654
No 98
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=61.93 E-value=34 Score=27.74 Aligned_cols=104 Identities=12% Similarity=0.083 Sum_probs=61.8
Q ss_pred hhHhHHHHHhCCcEEEEcCcchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEEe
Q 015764 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVID 139 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vvv~ 139 (401)
..+.....+.|++-++++.+ .+.++++.+. |.. ..+...++++.++.+. ...++.+|+.
T Consensus 20 ~~la~~L~~~g~~v~vid~~-~~~~~~~~~~-----------------g~~-~i~gd~~~~~~l~~a~--i~~ad~vi~~ 78 (140)
T 3fwz_A 20 SLLGEKLLASDIPLVVIETS-RTRVDELRER-----------------GVR-AVLGNAANEEIMQLAH--LECAKWLILT 78 (140)
T ss_dssp HHHHHHHHHTTCCEEEEESC-HHHHHHHHHT-----------------TCE-EEESCTTSHHHHHHTT--GGGCSEEEEC
T ss_pred HHHHHHHHHCCCCEEEEECC-HHHHHHHHHc-----------------CCC-EEECCCCCHHHHHhcC--cccCCEEEEE
Confidence 55666666789988777764 4455444332 111 1222344555544432 3357888876
Q ss_pred CCCCeeeehhhh----hhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 140 LPDWQVIPAENI----VASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 140 ~~DW~iIPlENl----iA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
..+- .+|+ .|+-.....++++.+++.+.++.+. +.|+|-|+....
T Consensus 79 ~~~~----~~n~~~~~~a~~~~~~~~iiar~~~~~~~~~l~---~~G~d~vi~p~~ 127 (140)
T 3fwz_A 79 IPNG----YEAGEIVASARAKNPDIEIIARAHYDDEVAYIT---ERGANQVVMGER 127 (140)
T ss_dssp CSCH----HHHHHHHHHHHHHCSSSEEEEEESSHHHHHHHH---HTTCSEEEEHHH
T ss_pred CCCh----HHHHHHHHHHHHHCCCCeEEEEECCHHHHHHHH---HCCCCEEECchH
Confidence 5553 3443 1222234569999999999988664 489998886544
No 99
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=61.60 E-value=66 Score=28.16 Aligned_cols=51 Identities=12% Similarity=0.056 Sum_probs=34.8
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEec
Q 015764 132 QAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKV 190 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~ 190 (401)
.++.+-+...+ .|.+.+-..+ . +..+...+.|.+|++. +.+.|+|.|++.+
T Consensus 88 gad~v~l~~~~---~~~~~~~~~~-~-~~~ig~sv~t~~~~~~---a~~~gaD~i~~~~ 138 (221)
T 1yad_A 88 TIHRVQLPSGS---FSPKQIRARF-P-HLHIGRSVHSLEEAVQ---AEKEDADYVLFGH 138 (221)
T ss_dssp TCCEEEECTTS---CCHHHHHHHC-T-TCEEEEEECSHHHHHH---HHHTTCSEEEEEC
T ss_pred CCCEEEeCCCc---cCHHHHHHHC-C-CCEEEEEcCCHHHHHH---HHhCCCCEEEECC
Confidence 57778776554 3555554433 2 4567778889888765 4578999999966
No 100
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=61.53 E-value=37 Score=30.39 Aligned_cols=108 Identities=14% Similarity=0.086 Sum_probs=61.5
Q ss_pred chhHhHHHHHhCCcEEEEcCcchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEE
Q 015764 59 SKQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVI 138 (401)
Q Consensus 59 ~K~~vt~AlEsG~~~~v~~~~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vvv 138 (401)
-.+++.++++.|++.+=++..+..-.+.+..+.. + +..+++= .+.+.++.+.+.. . .+++++.
T Consensus 27 ~~~~~~~l~~gGv~~iel~~k~~~~~~~i~~~~~--~------------~~~~gag-~vl~~d~~~~A~~-~-GAd~v~~ 89 (207)
T 2yw3_A 27 LLGLARVLEEEGVGALEITLRTEKGLEALKALRK--S------------GLLLGAG-TVRSPKEAEAALE-A-GAAFLVS 89 (207)
T ss_dssp HHHHHHHHHHTTCCEEEEECSSTHHHHHHHHHTT--S------------SCEEEEE-SCCSHHHHHHHHH-H-TCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHhC--C------------CCEEEeC-eEeeHHHHHHHHH-c-CCCEEEc
Confidence 3678999999999988777533211121111111 1 1222222 2556666555433 2 5788876
Q ss_pred eCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCC
Q 015764 139 DLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192 (401)
Q Consensus 139 ~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d 192 (401)
...| .|+-..... .+..++-.+.|++|++.+ ++.|+|-|-+-|..
T Consensus 90 ~~~d---~~v~~~~~~---~g~~~i~G~~t~~e~~~A---~~~Gad~v~~fpa~ 134 (207)
T 2yw3_A 90 PGLL---EEVAALAQA---RGVPYLPGVLTPTEVERA---LALGLSALKFFPAE 134 (207)
T ss_dssp SSCC---HHHHHHHHH---HTCCEEEEECSHHHHHHH---HHTTCCEEEETTTT
T ss_pred CCCC---HHHHHHHHH---hCCCEEecCCCHHHHHHH---HHCCCCEEEEecCc
Confidence 4333 333333333 233456568999998665 56799999998854
No 101
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=61.36 E-value=13 Score=35.66 Aligned_cols=42 Identities=14% Similarity=0.011 Sum_probs=35.8
Q ss_pred ceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHHhhc
Q 015764 160 KTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFD 204 (401)
Q Consensus 160 ~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l~~~~~ 204 (401)
.++...+.+++|++.++ +.|+|+|.|++-++++++++++.+.
T Consensus 198 ~~i~vev~tlee~~~A~---~aGaD~I~ld~~~~~~l~~~v~~l~ 239 (299)
T 2jbm_A 198 LKVEVECSSLQEAVQAA---EAGADLVLLDNFKPEELHPTATVLK 239 (299)
T ss_dssp SCEEEEESSHHHHHHHH---HTTCSEEEEESCCHHHHHHHHHHHH
T ss_pred CeEEEecCCHHHHHHHH---HcCCCEEEECCCCHHHHHHHHHHhh
Confidence 57999999999887655 6799999999999999988777663
No 102
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=61.33 E-value=45 Score=29.86 Aligned_cols=69 Identities=16% Similarity=0.011 Sum_probs=32.8
Q ss_pred CCCeEEEeCCC----CeeeehhhhhhcccCCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC---CHHHHHHHHHh
Q 015764 132 QAENIVIDLPD----WQVIPAENIVASFQGSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE---DVKAVLALKEY 202 (401)
Q Consensus 132 ~~~~vvv~~~D----W~iIPlENliA~~q~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~---d~~ev~~l~~~ 202 (401)
.++.+++...+ .+-+.+|.+-.-.+..+..+++ .++++++++.++ +.|+|||++-+. .+..+.+++++
T Consensus 169 G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~~ipvia~GGI~~~ed~~~~~---~~Gadgv~vgsal~~~~~~~~~~~~~ 245 (266)
T 2w6r_A 169 GAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAF---LAGADAALAASVFHFREIDMRELKEY 245 (266)
T ss_dssp TCSEEEEEETTTTTTCSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHH---HHTCSEEEESTTTC------------
T ss_pred CCCEEEEEeecCCCCcCCCCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHH---HcCCHHHHccHHHHcCCCCHHHHHHH
Confidence 46777775421 1112344332222222445665 468888888876 469999999763 23234444555
Q ss_pred h
Q 015764 203 F 203 (401)
Q Consensus 203 ~ 203 (401)
+
T Consensus 246 l 246 (266)
T 2w6r_A 246 L 246 (266)
T ss_dssp -
T ss_pred H
Confidence 4
No 103
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=61.18 E-value=16 Score=31.80 Aligned_cols=105 Identities=17% Similarity=0.160 Sum_probs=57.7
Q ss_pred chhHhHHHHHhCCcEEEEcCcchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEE
Q 015764 59 SKQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVI 138 (401)
Q Consensus 59 ~K~~vt~AlEsG~~~~v~~~~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vvv 138 (401)
+.+.+..|++.|+|.+.++..+.+..+...++ |..+ .+.+.++++...+. ...+|++.+
T Consensus 69 ~~~~i~~a~~~Gad~V~~~~~~~~~~~~~~~~-----------------g~~~--~~g~~t~~e~~~a~--~~G~d~v~v 127 (212)
T 2v82_A 69 KPEQVDALARMGCQLIVTPNIHSEVIRRAVGY-----------------GMTV--CPGCATATEAFTAL--EAGAQALKI 127 (212)
T ss_dssp SHHHHHHHHHTTCCEEECSSCCHHHHHHHHHT-----------------TCEE--ECEECSHHHHHHHH--HTTCSEEEE
T ss_pred CHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHc-----------------CCCE--EeecCCHHHHHHHH--HCCCCEEEE
Confidence 46789999999999998776554444333222 1111 11257777765442 235899887
Q ss_pred eCCCCeeeehhh---hhhcccCCCceEEEEcC-CHHHHHHHHHHhhcccCeEEEec
Q 015764 139 DLPDWQVIPAEN---IVASFQGSGKTVFAISK-TPSEAQIFLEALEQGLGGIVLKV 190 (401)
Q Consensus 139 ~~~DW~iIPlEN---liA~~q~~~~~l~a~v~-~~~eA~~al~~LE~G~DGVvl~~ 190 (401)
...+ ...++. +.+.+. .+..|++.-. +.++++.+ ++.|+|||++-+
T Consensus 128 ~~t~--~~g~~~~~~l~~~~~-~~ipvia~GGI~~~~i~~~---~~~Ga~gv~vGs 177 (212)
T 2v82_A 128 FPSS--AFGPQYIKALKAVLP-SDIAVFAVGGVTPENLAQW---IDAGCAGAGLGS 177 (212)
T ss_dssp TTHH--HHCHHHHHHHHTTSC-TTCEEEEESSCCTTTHHHH---HHHTCSEEEECT
T ss_pred ecCC--CCCHHHHHHHHHhcc-CCCeEEEeCCCCHHHHHHH---HHcCCCEEEECh
Confidence 3211 122332 222221 1245655421 25555544 557999999764
No 104
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0
Probab=61.07 E-value=50 Score=24.85 Aligned_cols=83 Identities=13% Similarity=0.135 Sum_probs=49.8
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHH----HHHHHHHhhcccCeEEEe
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSE----AQIFLEALEQGLGGIVLK 189 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~e----A~~al~~LE~G~DGVvl~ 189 (401)
...+.++....... ..+.++++..-.. ..--.++..+. .....++......++ ++....+++.|+++.+.+
T Consensus 32 ~~~~~~~~~~~~~~--~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~~~~~~g~~~~l~K 108 (135)
T 3eqz_A 32 AFQHPRAFLTLSLN--KQDIIILDLMMPD-MDGIEVIRHLAEHKSPASLILISGYDSGVLHSAETLALSCGLNVINTFTK 108 (135)
T ss_dssp EESCHHHHTTSCCC--TTEEEEEECCTTT-THHHHHHHHHHHTTCCCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEEES
T ss_pred eecCHHHHHHhhcc--CCCEEEEeCCCCC-CCHHHHHHHHHhCCCCCCEEEEEeccchhHHHHHHHHHHcCCCcceeeCC
Confidence 35666654443332 2677777543111 11222333332 234567776666554 577888999999999999
Q ss_pred cCCHHHHHHHHH
Q 015764 190 VEDVKAVLALKE 201 (401)
Q Consensus 190 ~~d~~ev~~l~~ 201 (401)
|-++.++.+.-.
T Consensus 109 P~~~~~l~~~l~ 120 (135)
T 3eqz_A 109 PINTEVLTCFLT 120 (135)
T ss_dssp SCCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 999988765433
No 105
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=61.05 E-value=29 Score=30.67 Aligned_cols=28 Identities=14% Similarity=0.134 Sum_probs=21.1
Q ss_pred EEEEEe--CchhHhHHHHHhCCcEEEEcCc
Q 015764 52 RVWIWT--ESKQVMTAAVERGWNTFVFLSE 79 (401)
Q Consensus 52 ~vWiw~--~~K~~vt~AlEsG~~~~v~~~~ 79 (401)
.+|+-- .+.+.+..+++.|+|.+++..+
T Consensus 76 pv~v~ggi~~~~~~~~~l~~Gad~V~lg~~ 105 (244)
T 2y88_A 76 QVELSGGIRDDESLAAALATGCARVNVGTA 105 (244)
T ss_dssp EEEEESSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred cEEEECCCCCHHHHHHHHHcCCCEEEECch
Confidence 366532 3567799999999999998764
No 106
>2jyx_A Lipoprotein SPR; solution structure, construct optimized, membrane, palmitate, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli K12} PDB: 2k1g_A
Probab=60.84 E-value=3.8 Score=34.75 Aligned_cols=31 Identities=39% Similarity=0.634 Sum_probs=26.2
Q ss_pred CceeeeeecCCCCEEEEEecCCCcccceeee
Q 015764 365 EKAIPVTSLKVGDEVLLRVQGAARHTGIEIQ 395 (401)
Q Consensus 365 g~~vsVt~LK~GD~VL~~~~~~gRHfG~~I~ 395 (401)
++.++..+|+|||-|+........|+||-+.
T Consensus 60 g~~v~~~~l~pGDLvff~~~~~~~HVgIy~G 90 (136)
T 2jyx_A 60 GKSVSRSNLRTGDLVLFRAGSTGRHVGIYIG 90 (136)
T ss_dssp SEECCTTTCCTTEEEEEECSSSSEEEEEEEE
T ss_pred CeEcchHhCCCCCEEEECCCCCCCEEEEEEc
Confidence 5678888999999999887666789999874
No 107
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=60.57 E-value=30 Score=26.76 Aligned_cols=40 Identities=5% Similarity=0.020 Sum_probs=28.8
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
...++...... +......+++.|+++++.+|-+++++.+.
T Consensus 80 ~~~ii~~s~~~-~~~~~~~~~~~ga~~~l~KP~~~~~l~~~ 119 (136)
T 3kto_A 80 HLPTIVMASSS-DIPTAVRAMRASAADFIEKPFIEHVLVHD 119 (136)
T ss_dssp CCCEEEEESSC-CHHHHHHHHHTTCSEEEESSBCHHHHHHH
T ss_pred CCCEEEEEcCC-CHHHHHHHHHcChHHheeCCCCHHHHHHH
Confidence 44555554433 44556788899999999999999877644
No 108
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=60.47 E-value=47 Score=26.15 Aligned_cols=81 Identities=12% Similarity=0.130 Sum_probs=47.5
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcc-cCeEEEecCC
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQG-LGGIVLKVED 192 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G-~DGVvl~~~d 192 (401)
...+.++.-.... ....+.+|++..-.. ..--.++..+. .....++..... .+......+++.| +++++.+|-+
T Consensus 43 ~~~~~~~a~~~l~-~~~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~~ii~~s~~-~~~~~~~~~~~~g~~~~~l~KP~~ 119 (153)
T 3hv2_A 43 FARDATQALQLLA-SREVDLVISAAHLPQ-MDGPTLLARIHQQYPSTTRILLTGD-PDLKLIAKAINEGEIYRYLSKPWD 119 (153)
T ss_dssp EESSHHHHHHHHH-HSCCSEEEEESCCSS-SCHHHHHHHHHHHCTTSEEEEECCC-CCHHHHHHHHHTTCCSEEECSSCC
T ss_pred EECCHHHHHHHHH-cCCCCEEEEeCCCCc-CcHHHHHHHHHhHCCCCeEEEEECC-CCHHHHHHHHhCCCcceEEeCCCC
Confidence 4556555333332 235788888544222 11122333322 234566665544 4455677899999 9999999999
Q ss_pred HHHHHHH
Q 015764 193 VKAVLAL 199 (401)
Q Consensus 193 ~~ev~~l 199 (401)
++++.+.
T Consensus 120 ~~~l~~~ 126 (153)
T 3hv2_A 120 DQELLLA 126 (153)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887654
No 109
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=60.43 E-value=47 Score=25.70 Aligned_cols=81 Identities=15% Similarity=0.127 Sum_probs=48.1
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
...+.++.-..... ...+.+|++..-.. ..--.++..+.. ....++...... +......+++.|+++++.+|-
T Consensus 37 ~~~~~~~a~~~l~~-~~~dlii~d~~l~~-~~g~~~~~~l~~~~~~~~~pii~ls~~~-~~~~~~~~~~~g~~~~l~kp~ 113 (147)
T 2zay_A 37 QCGNAIEAVPVAVK-THPHLIITEANMPK-ISGMDLFNSLKKNPQTASIPVIALSGRA-TAKEEAQLLDMGFIDFIAKPV 113 (147)
T ss_dssp EESSHHHHHHHHHH-HCCSEEEEESCCSS-SCHHHHHHHHHTSTTTTTSCEEEEESSC-CHHHHHHHHHHTCSEEEESSC
T ss_pred EeCCHHHHHHHHHc-CCCCEEEEcCCCCC-CCHHHHHHHHHcCcccCCCCEEEEeCCC-CHHHHHHHHhCCCCEEEeCCC
Confidence 34555543333222 24678888543221 222334544443 345666665543 345667888999999999999
Q ss_pred CHHHHHHH
Q 015764 192 DVKAVLAL 199 (401)
Q Consensus 192 d~~ev~~l 199 (401)
+++++.+.
T Consensus 114 ~~~~L~~~ 121 (147)
T 2zay_A 114 NAIRLSAR 121 (147)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 99887654
No 110
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=60.27 E-value=4.7 Score=31.62 Aligned_cols=82 Identities=11% Similarity=0.071 Sum_probs=45.5
Q ss_pred ecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC-CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHH
Q 015764 117 VSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG-SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKA 195 (401)
Q Consensus 117 v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~-~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~e 195 (401)
..+.++.-.........+.++++..-..-..--.++..+.. ....++......+. .....+++.|+++++.+|-++++
T Consensus 35 ~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~~~~~-~~~~~~~~~g~~~~l~KP~~~~~ 113 (140)
T 3h5i_A 35 ALTGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTAHTEP-AVVEKIRSVTAYGYVMKSATEQV 113 (140)
T ss_dssp ESSHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEESSSSC-CCCGGGGGSCEEEEEETTCCHHH
T ss_pred ecChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEECCCCH-HHHHHHHhCCCcEEEeCCCCHHH
Confidence 45555433322222346788885432110112223333321 24456665554433 34567889999999999999988
Q ss_pred HHHH
Q 015764 196 VLAL 199 (401)
Q Consensus 196 v~~l 199 (401)
+.+.
T Consensus 114 l~~~ 117 (140)
T 3h5i_A 114 LITI 117 (140)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 111
>2jmz_A Hypothetical protein MJ0781; unknown function; NMR {Methanocaldococcus jannaschii} PDB: 2jnq_A
Probab=60.22 E-value=10 Score=33.29 Aligned_cols=66 Identities=17% Similarity=0.110 Sum_probs=39.2
Q ss_pred CeEEEE-cCCCCeeEEeeeeEEEe--ccceeEEEEEecCCCCeEE------EEEeEecceEEEecCCCCCCCCCceeeee
Q 015764 301 KEVIVV-DQKGRQRTAVVGRVKIE--SRPLILVEAKTNSGDQTLY------GIILQNAETVALVSPCKGTGEQEKAIPVT 371 (401)
Q Consensus 301 ~eVLvV-d~~G~tR~~~VGRvKIE--~RPLlLVeAe~~~~~G~~~------sviLQnAETIRLv~p~~g~~~~g~~vsVt 371 (401)
+.|+.. +.+|+.+...|=++--- .+||+.|+.+ +|+.+ .++..+... -..+...
T Consensus 57 ~~v~s~~~~~gk~~~~~v~~v~~~~~~~~~~~I~t~----~G~~i~~T~~Hp~~v~~~g~-------------~~w~~A~ 119 (186)
T 2jmz_A 57 IYIKSFNKLSLIIEDKRILRVWRKKYSGKLIKITTK----NRREITLTHDHPVYISKTGE-------------VLEINAE 119 (186)
T ss_dssp CEEECCBTTTTBCCEEECCEEEEECCCEEEECCCCT----TSCCCCBCTTCEEEEEETTE-------------EEEEEGG
T ss_pred cEEEEEECCCCCEEEEEeEEEEEcCCCCcEEEEEEC----CCCEEEEeCCCEEEEeCCCe-------------EEEEEhh
Confidence 455555 46888777777665542 3566666653 35442 333333211 1246778
Q ss_pred ecCCCCEEEEEe
Q 015764 372 SLKVGDEVLLRV 383 (401)
Q Consensus 372 ~LK~GD~VL~~~ 383 (401)
+||+||.|++.-
T Consensus 120 eLk~GD~v~~~~ 131 (186)
T 2jmz_A 120 MVKVGDYIYIPK 131 (186)
T ss_dssp GCCTTSEEEEEC
T ss_pred cCCCCCEEEecc
Confidence 999999999863
No 112
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=59.97 E-value=18 Score=30.85 Aligned_cols=33 Identities=21% Similarity=0.310 Sum_probs=27.4
Q ss_pred ceeeeeeccCCCeEEEEcC-CCCeeEEeeeeEEE
Q 015764 290 KTCYLSELKSGKEVIVVDQ-KGRQRTAVVGRVKI 322 (401)
Q Consensus 290 kT~YLSEL~sG~eVLvVd~-~G~tR~~~VGRvKI 322 (401)
+..+-++|+.||.|++.|. +|..|...|=++..
T Consensus 85 ~~v~A~~l~~GD~v~~~~~~~~~~~~~~V~~v~~ 118 (145)
T 1at0_A 85 TFVFADRIEEKNQVLVRDVETGELRPQRVVKVGS 118 (145)
T ss_dssp EEEEGGGCCTTCEEEEECTTTCCEEEEEEEEEEE
T ss_pred EEEEHHHCcCCCEEEEecCCCCCEEEEEEEEEEE
Confidence 5678999999999999997 67788887777654
No 113
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=59.82 E-value=56 Score=24.96 Aligned_cols=82 Identities=16% Similarity=0.049 Sum_probs=47.1
Q ss_pred EecChhhhhhhcccc----CCCCeEEEeCCCCeeeehhhhhhccc------CCCceEEEEcCCHHHHHHHHHHhhcc-cC
Q 015764 116 EVSTPQELQQLQPAD----GQAENIVIDLPDWQVIPAENIVASFQ------GSGKTVFAISKTPSEAQIFLEALEQG-LG 184 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~----~~~~~vvv~~~DW~iIPlENliA~~q------~~~~~l~a~v~~~~eA~~al~~LE~G-~D 184 (401)
...+.++.-...... ...+.++++..-.. ..--.++..+. .....++..... .+......+++.| ++
T Consensus 40 ~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~~~~~~ii~~t~~-~~~~~~~~~~~~g~~~ 117 (146)
T 3ilh_A 40 SVTSGNAAINKLNELYAAGRWPSIICIDINMPG-INGWELIDLFKQHFQPMKNKSIVCLLSSS-LDPRDQAKAEASDWVD 117 (146)
T ss_dssp EESSHHHHHHHHHHHHTSSCCCSEEEEESSCSS-SCHHHHHHHHHHHCGGGTTTCEEEEECSS-CCHHHHHHHHHCSSCC
T ss_pred ecCCHHHHHHHHHHhhccCCCCCEEEEcCCCCC-CCHHHHHHHHHHhhhhccCCCeEEEEeCC-CChHHHHHHHhcCCcc
Confidence 355665543332221 45788888543221 22223333332 234555555444 4445566889999 99
Q ss_pred eEEEecCCHHHHHHH
Q 015764 185 GIVLKVEDVKAVLAL 199 (401)
Q Consensus 185 GVvl~~~d~~ev~~l 199 (401)
+++.+|-+++++.+.
T Consensus 118 ~~l~KP~~~~~L~~~ 132 (146)
T 3ilh_A 118 YYVSKPLTANALNNL 132 (146)
T ss_dssp EEECSSCCHHHHHHH
T ss_pred eeeeCCCCHHHHHHH
Confidence 999999999877644
No 114
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=59.65 E-value=37 Score=26.67 Aligned_cols=66 Identities=21% Similarity=0.285 Sum_probs=39.6
Q ss_pred CCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 132 QAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
..+.++++..-.. ..--.++..+. .....++..... .+......+++.|+++++.+|-+++++.+.
T Consensus 61 ~~dlii~d~~l~~-~~g~~~~~~l~~~~~~~~ii~~s~~-~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~ 128 (152)
T 3eul_A 61 LPDVALLDYRMPG-MDGAQVAAAVRSYELPTRVLLISAH-DEPAIVYQALQQGAAGFLLKDSTRTEIVKA 128 (152)
T ss_dssp CCSEEEEETTCSS-SCHHHHHHHHHHTTCSCEEEEEESC-CCHHHHHHHHHTTCSEEEETTCCHHHHHHH
T ss_pred CCCEEEEeCCCCC-CCHHHHHHHHHhcCCCCeEEEEEcc-CCHHHHHHHHHcCCCEEEecCCCHHHHHHH
Confidence 4567777543211 11122333332 224456655544 344567788999999999999999877644
No 115
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=59.50 E-value=9.4 Score=36.15 Aligned_cols=116 Identities=8% Similarity=0.065 Sum_probs=62.3
Q ss_pred chhHhHHHHHhCCcEEEEcCcchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEec-ChhhhhhhccccCCCCeEE
Q 015764 59 SKQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVS-TPQELQQLQPADGQAENIV 137 (401)
Q Consensus 59 ~K~~vt~AlEsG~~~~v~~~~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~-~~e~~e~~~~~~~~~~~vv 137 (401)
-...+..|-|.|+|++|++.=-.+...++... .++.|-....++.-+ +.|.++.++......=|.+
T Consensus 105 ~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~-------------~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY~V 171 (252)
T 3tha_A 105 LEKFVKKAKSLGICALIVPELSFEESDDLIKE-------------CERYNIALITLVSVTTPKERVKKLVKHAKGFIYLL 171 (252)
T ss_dssp HHHHHHHHHHTTEEEEECTTCCGGGCHHHHHH-------------HHHTTCEECEEEETTSCHHHHHHHHTTCCSCEEEE
T ss_pred HHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHH-------------HHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeEEEE
Confidence 36688999999999999975212222222222 112233333333333 3566666665543333343
Q ss_pred Ee--CCCC-eee--ehhhhhhcccCCC-ceEE--EEcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 138 ID--LPDW-QVI--PAENIVASFQGSG-KTVF--AISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 138 v~--~~DW-~iI--PlENliA~~q~~~-~~l~--a~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
-. .++- +-+ +++++++++.... ..++ ..++++++|+.+ .+ ++|||++-+.
T Consensus 172 s~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~---~~-~ADGVIVGSA 229 (252)
T 3tha_A 172 ASIGITGTKSVEEAILQDKVKEIRSFTNLPIFVGFGIQNNQDVKRM---RK-VADGVIVGTS 229 (252)
T ss_dssp CCSCSSSCSHHHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHH---TT-TSSEEEECHH
T ss_pred ecCCCCCcccCCCHHHHHHHHHHHHhcCCcEEEEcCcCCHHHHHHH---Hh-cCCEEEECHH
Confidence 21 1122 122 2567777665432 2333 346788888754 34 6999998764
No 116
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=59.46 E-value=37 Score=26.01 Aligned_cols=66 Identities=8% Similarity=0.124 Sum_probs=41.1
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccCC----CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 132 QAENIVIDLPDWQVIPAENIVASFQGS----GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~~----~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
..+.++++..-.. ..--.++..+... ...++...... +......+++.|+++++.+|-+++++.+.
T Consensus 62 ~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~~~~ii~~t~~~-~~~~~~~~~~~g~~~~l~kP~~~~~l~~~ 131 (149)
T 1k66_A 62 RPAVILLDLNLPG-TDGREVLQEIKQDEVLKKIPVVIMTTSS-NPKDIEICYSYSISSYIVKPLEIDRLTET 131 (149)
T ss_dssp CCSEEEECSCCSS-SCHHHHHHHHTTSTTGGGSCEEEEESCC-CHHHHHHHHHTTCSEEEECCSSHHHHHHH
T ss_pred CCcEEEEECCCCC-CCHHHHHHHHHhCcccCCCeEEEEeCCC-CHHHHHHHHHCCCCEEEeCCCCHHHHHHH
Confidence 4677777433221 2223445554432 34566655543 34566778899999999999999887654
No 117
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=59.38 E-value=20 Score=35.12 Aligned_cols=112 Identities=16% Similarity=0.148 Sum_probs=62.0
Q ss_pred hhHhHHHHHhCCcEEEEcCcc--h-hhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeE
Q 015764 60 KQVMTAAVERGWNTFVFLSEN--Q-QLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENI 136 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~~--~-~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~v 136 (401)
.+.+..++|.|+|.+++...+ . ...+.+..+.. .-+.++. ...+.++++.+.+.. ..+|++
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~-------------~~~~~Vi-vg~v~t~e~A~~l~~--aGaD~I 170 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS-------------KMNIDVI-VGNVVTEEATKELIE--NGADGI 170 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHH-------------HCCCEEE-EEEECSHHHHHHHHH--TTCSEE
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHH-------------hcCCcEE-EccCCCHHHHHHHHH--cCcCEE
Confidence 688899999999988874321 1 11111111110 0011111 125788887655543 368999
Q ss_pred EEeC-----------CCCeeee----hhhhhhcccCCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 137 VIDL-----------PDWQVIP----AENIVASFQGSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 137 vv~~-----------~DW~iIP----lENliA~~q~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
++-. .+|. .| +.++...++..+..|+| .+.+.+++..++ ..|+|||++-+-
T Consensus 171 ~VG~~~Gs~~~tr~~~g~g-~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kal---a~GAd~V~vGs~ 238 (361)
T 3khj_A 171 KVGIGPGSICTTRIVAGVG-VPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKAL---AVGASSVMIGSI 238 (361)
T ss_dssp EECSSCCTTCCHHHHTCBC-CCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHH---HHTCSEEEESTT
T ss_pred EEecCCCcCCCcccccCCC-CCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHH---HcCCCEEEEChh
Confidence 8821 1222 23 22332222222456888 578888876665 459999998765
No 118
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=59.29 E-value=7.2 Score=35.57 Aligned_cols=109 Identities=9% Similarity=0.082 Sum_probs=54.1
Q ss_pred HHHHHhCCcEEEEcCcchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecC-hhhhhhhccccCCCCeEEEeC--
Q 015764 64 TAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVST-PQELQQLQPADGQAENIVIDL-- 140 (401)
Q Consensus 64 t~AlEsG~~~~v~~~~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~-~e~~e~~~~~~~~~~~vvv~~-- 140 (401)
..|.+.|+|+++++....+...++-.. .++.|......+...+ .+.++.+.... .+++.+..
T Consensus 112 ~~a~~aGadgv~v~d~~~~~~~~~~~~-------------~~~~g~~~i~~~a~~t~~e~~~~~~~~~--~g~v~~~s~~ 176 (262)
T 1rd5_A 112 AKMKEAGVHGLIVPDLPYVAAHSLWSE-------------AKNNNLELVLLTTPAIPEDRMKEITKAS--EGFVYLVSVN 176 (262)
T ss_dssp HHHHHTTCCEEECTTCBTTTHHHHHHH-------------HHHTTCEECEEECTTSCHHHHHHHHHHC--CSCEEEECSS
T ss_pred HHHHHcCCCEEEEcCCChhhHHHHHHH-------------HHHcCCceEEEECCCCCHHHHHHHHhcC--CCeEEEecCC
Confidence 349999999999875433222222111 1122333333333333 34444444332 24554432
Q ss_pred --CCC-eeee--hhhhhhcccCC-CceEE--EEcCCHHHHHHHHHHhhcccCeEEEec
Q 015764 141 --PDW-QVIP--AENIVASFQGS-GKTVF--AISKTPSEAQIFLEALEQGLGGIVLKV 190 (401)
Q Consensus 141 --~DW-~iIP--lENliA~~q~~-~~~l~--a~v~~~~eA~~al~~LE~G~DGVvl~~ 190 (401)
++- +-+| ...+++++... +..|+ ..+++++.++. +++.|+|||++-+
T Consensus 177 G~tG~~~~~~~~~~~~i~~v~~~~~~pI~vgGGI~~~e~~~~---~~~~GAdgvvVGS 231 (262)
T 1rd5_A 177 GVTGPRANVNPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQ---IAQWGADGVIIGS 231 (262)
T ss_dssp CCBCTTSCBCTHHHHHHHHHHHHCSSCEEEESCCCSHHHHHH---HHHTTCSEEEECH
T ss_pred CCCCCCcCCCchHHHHHHHHHhhcCCeEEEECCcCCHHHHHH---HHHcCCCEEEECh
Confidence 121 0223 33466655421 22343 34566776665 5668999999865
No 119
>2wfw_A ARC; ATP-binding protein, proteasomal atpases, PAN, AAA, ATP-binding, nucleotide-binding; 1.60A {Rhodococcus erythropolis} PDB: 3fp9_A
Probab=59.07 E-value=11 Score=33.93 Aligned_cols=44 Identities=16% Similarity=0.326 Sum_probs=27.0
Q ss_pred CCCCCCeeeecCCceeEEEecCCceeeeeeccCCCeEEE------EcCCCCeeEEeeeeEE
Q 015764 267 YIASRPFRVNAGPVHAYVLVPGGKTCYLSELKSGKEVIV------VDQKGRQRTAVVGRVK 321 (401)
Q Consensus 267 Yva~RPFRVNAGaVHaYv~~pggkT~YLSEL~sG~eVLv------Vd~~G~tR~~~VGRvK 321 (401)
|+..|.+||+.-|-= =.+.|+.|++|+. |.+-|-.++..|-.+|
T Consensus 25 ~t~GRkMrv~vsP~v-----------d~~~L~~Gq~V~LNEal~VVea~~~~~~Gev~tv~ 74 (153)
T 2wfw_A 25 FTSGRKMRLTCSPNI-----------DTDTLALGQTVRLNEALTIVEAGTYEQVGEISTLR 74 (153)
T ss_dssp EETTEEEEECBCTTC-----------CGGGCCTTCEEEECTTCCEEEECCCCCSEEEEEEE
T ss_pred EECCcEEEEEeCCCC-----------CHHHCCCCCEEEECCceEEEEccCCCCccCEEEEE
Confidence 677788888766521 2467888888874 4444544444444444
No 120
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=58.93 E-value=25 Score=33.78 Aligned_cols=107 Identities=11% Similarity=0.132 Sum_probs=60.5
Q ss_pred hhHhHHHHHhCCcEEEEcCcc--hhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEE
Q 015764 60 KQVMTAAVERGWNTFVFLSEN--QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIV 137 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~~--~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vv 137 (401)
.+.+..+++.|++.+.+.-+. .+.++.+.. .|..+ ...+.+.++...+.. ..+|+++
T Consensus 112 ~~~~~~~~~~g~~~V~~~~g~~~~~~i~~~~~-----------------~g~~v--~~~v~t~~~a~~a~~--~GaD~i~ 170 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSFHFGVPDREVIARLRR-----------------AGTLT--LVTATTPEEARAVEA--AGADAVI 170 (369)
T ss_dssp HHHHHHHHHSCCSEEEEESSCCCHHHHHHHHH-----------------TTCEE--EEEESSHHHHHHHHH--TTCSEEE
T ss_pred HHHHHHHHhcCCCEEEEeCCCCcHHHHHHHHH-----------------CCCeE--EEECCCHHHHHHHHH--cCCCEEE
Confidence 567888999999988776432 344443322 13333 335778877544332 3589999
Q ss_pred EeCCC--C---ee----------eehhhhhhcccC-CCceEEEE--cCCHHHHHHHHHHhhcccCeEEEec
Q 015764 138 IDLPD--W---QV----------IPAENIVASFQG-SGKTVFAI--SKTPSEAQIFLEALEQGLGGIVLKV 190 (401)
Q Consensus 138 v~~~D--W---~i----------IPlENliA~~q~-~~~~l~a~--v~~~~eA~~al~~LE~G~DGVvl~~ 190 (401)
++... + +. ++.-.++.++.. .+..|++. +.|.+++..+ |+.|+|||.+-+
T Consensus 171 v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPViaaGGI~~~~~~~~~---l~~GAd~V~vGs 238 (369)
T 3bw2_A 171 AQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVAAGGIMRGGQIAAV---LAAGADAAQLGT 238 (369)
T ss_dssp EECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHH---HHTTCSEEEESH
T ss_pred EeCCCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEEECCCCCHHHHHHH---HHcCCCEEEECh
Confidence 96531 1 11 332334444321 13345543 4566666554 568999999864
No 121
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=58.84 E-value=49 Score=29.16 Aligned_cols=111 Identities=19% Similarity=0.159 Sum_probs=60.3
Q ss_pred hhHhHHHHHhCCcEEEEcCcchhhHhhccceeeeeee-ee-cCCccccCCCCeeEEEEEecCh-hhhhhhccccCCCCeE
Q 015764 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPL-FI-KEGEVYDSGDRRVGSIIEVSTP-QELQQLQPADGQAENI 136 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~~~~~~~~~~~i~~i~~l-~~-~~g~~~~~~gk~v~~~~~v~~~-e~~e~~~~~~~~~~~v 136 (401)
.+++.++.+.|++.+-+.. .+..+.+.+...+ |+ .+ .++ ++ ++. . -+..+ ++.+.+. ...++.+
T Consensus 39 ~~~a~~~~~~G~~~i~~~~--~~~i~~i~~~~~~-p~i~~~~~~--~~-~~~---~--~i~~~~~~i~~~~--~~Gad~V 105 (234)
T 1yxy_A 39 PLMAKAAQEAGAVGIRANS--VRDIKEIQAITDL-PIIGIIKKD--YP-PQE---P--FITATMTEVDQLA--ALNIAVI 105 (234)
T ss_dssp HHHHHHHHHHTCSEEEEES--HHHHHHHHTTCCS-CEEEECBCC--CT-TSC---C--CBSCSHHHHHHHH--TTTCSEE
T ss_pred HHHHHHHHHCCCcEeecCC--HHHHHHHHHhCCC-CEEeeEcCC--CC-ccc---c--ccCChHHHHHHHH--HcCCCEE
Confidence 6788999999999988762 2334433332211 21 11 111 11 010 1 12323 3333332 2357888
Q ss_pred EEeCCC---CeeeehhhhhhcccCC--CceEEEEcCCHHHHHHHHHHhhcccCeE
Q 015764 137 VIDLPD---WQVIPAENIVASFQGS--GKTVFAISKTPSEAQIFLEALEQGLGGI 186 (401)
Q Consensus 137 vv~~~D---W~iIPlENliA~~q~~--~~~l~a~v~~~~eA~~al~~LE~G~DGV 186 (401)
.+.... +.--.+.+++..+... +..++..+.+.+||+ .+++.|+|.|
T Consensus 106 ~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t~~ea~---~a~~~Gad~i 157 (234)
T 1yxy_A 106 AMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADISTFDEGL---VAHQAGIDFV 157 (234)
T ss_dssp EEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECSSHHHHH---HHHHTTCSEE
T ss_pred EEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeCCCHHHHH---HHHHcCCCEE
Confidence 876541 2112345666655433 557888999999965 4567899988
No 122
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=58.46 E-value=65 Score=25.27 Aligned_cols=81 Identities=15% Similarity=0.204 Sum_probs=47.7
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcc-cCeEEEecCC
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQG-LGGIVLKVED 192 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G-~DGVvl~~~d 192 (401)
...+.++.-..... ...+.++++..-.. ..--.++..+. .....++...... +......+++.| +++++.+|-+
T Consensus 36 ~~~~~~~a~~~l~~-~~~dlvi~d~~l~~-~~g~~~~~~l~~~~~~~~ii~ls~~~-~~~~~~~~~~~g~~~~~l~kP~~ 112 (154)
T 2rjn_A 36 TFTSPLDALEALKG-TSVQLVISDMRMPE-MGGEVFLEQVAKSYPDIERVVISGYA-DAQATIDAVNRGKISRFLLKPWE 112 (154)
T ss_dssp EESCHHHHHHHHTT-SCCSEEEEESSCSS-SCHHHHHHHHHHHCTTSEEEEEECGG-GHHHHHHHHHTTCCSEEEESSCC
T ss_pred EeCCHHHHHHHHhc-CCCCEEEEecCCCC-CCHHHHHHHHHHhCCCCcEEEEecCC-CHHHHHHHHhccchheeeeCCCC
Confidence 45665553333322 24678888543221 12223333332 2345666655444 456778889998 9999999999
Q ss_pred HHHHHHH
Q 015764 193 VKAVLAL 199 (401)
Q Consensus 193 ~~ev~~l 199 (401)
++++.+.
T Consensus 113 ~~~L~~~ 119 (154)
T 2rjn_A 113 DEDVFKV 119 (154)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9877543
No 123
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=58.41 E-value=22 Score=29.45 Aligned_cols=78 Identities=14% Similarity=0.241 Sum_probs=44.6
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeeh---hhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEec
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPA---ENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKV 190 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPl---ENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~ 190 (401)
...+.++.-.... ....|.+++ |+.. |- -.++..+. .....|+..... .+......+++.|+++.+.+|
T Consensus 36 ~~~~~~~al~~~~-~~~~dlvl~---D~~l-p~~~g~~~~~~l~~~~~~~~ii~lt~~-~~~~~~~~a~~~Ga~~~l~KP 109 (184)
T 3rqi_A 36 QAHNKDEALKLAG-AEKFEFITV---XLHL-GNDSGLSLIAPLCDLQPDARILVLTGY-ASIATAVQAVKDGADNYLAKP 109 (184)
T ss_dssp EECSHHHHHHHHT-TSCCSEEEE---CSEE-TTEESHHHHHHHHHHCTTCEEEEEESS-CCHHHHHHHHHHTCSEEEESS
T ss_pred EeCCHHHHHHHHh-hCCCCEEEE---eccC-CCccHHHHHHHHHhcCCCCCEEEEeCC-CCHHHHHHHHHhCHHHheeCC
Confidence 4556555333222 234677777 4432 21 12222222 234566655544 344566788999999999999
Q ss_pred CCHHHHHHH
Q 015764 191 EDVKAVLAL 199 (401)
Q Consensus 191 ~d~~ev~~l 199 (401)
-+++++.+.
T Consensus 110 ~~~~~L~~~ 118 (184)
T 3rqi_A 110 ANVESILAA 118 (184)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 999877543
No 124
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=58.34 E-value=25 Score=26.69 Aligned_cols=80 Identities=10% Similarity=0.016 Sum_probs=44.2
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
...+.++.-.... ....+.++++..-.. ..--+++..+.. ....++......++.. ..+++.|+++++.+|-
T Consensus 32 ~~~~~~~a~~~l~-~~~~dlvi~d~~l~~-~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~--~~~~~~g~~~~l~KP~ 107 (133)
T 3nhm_A 32 TAADGASGLQQAL-AHPPDVLISDVNMDG-MDGYALCGHFRSEPTLKHIPVIFVSGYAPRTE--GPADQPVPDAYLVKPV 107 (133)
T ss_dssp EESSHHHHHHHHH-HSCCSEEEECSSCSS-SCHHHHHHHHHHSTTTTTCCEEEEESCCC-------TTSCCCSEEEESSC
T ss_pred EECCHHHHHHHHh-cCCCCEEEEeCCCCC-CCHHHHHHHHHhCCccCCCCEEEEeCCCcHhH--HHHhhcCCceEEeccC
Confidence 3555554333222 234677777433211 122234444433 2456777766654443 7899999999999999
Q ss_pred CHHHHHHH
Q 015764 192 DVKAVLAL 199 (401)
Q Consensus 192 d~~ev~~l 199 (401)
+++++.+.
T Consensus 108 ~~~~l~~~ 115 (133)
T 3nhm_A 108 KPPVLIAQ 115 (133)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 99877654
No 125
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=58.34 E-value=43 Score=24.79 Aligned_cols=81 Identities=15% Similarity=0.162 Sum_probs=45.8
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC--CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG--SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~--~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (401)
...+.++.-.... ....+.++++..-.. ..--.++.++.. ....++......+ ......+++.|+++.+.+|-++
T Consensus 29 ~~~~~~~a~~~~~-~~~~dlil~D~~l~~-~~g~~~~~~l~~~~~~~~ii~~s~~~~-~~~~~~~~~~g~~~~l~kp~~~ 105 (121)
T 2pl1_A 29 DAEDAKEADYYLN-EHIPDIAIVDLGLPD-EDGLSLIRRWRSNDVSLPILVLTARES-WQDKVEVLSAGADDYVTKPFHI 105 (121)
T ss_dssp EESSHHHHHHHHH-HSCCSEEEECSCCSS-SCHHHHHHHHHHTTCCSCEEEEESCCC-HHHHHHHHHTTCSEEEESSCCH
T ss_pred EeCCHHHHHHHHh-ccCCCEEEEecCCCC-CCHHHHHHHHHhcCCCCCEEEEecCCC-HHHHHHHHHcCccceEECCCCH
Confidence 4566555333222 234677777433211 122234444332 2445666554433 3455788999999999999999
Q ss_pred HHHHHH
Q 015764 194 KAVLAL 199 (401)
Q Consensus 194 ~ev~~l 199 (401)
+++...
T Consensus 106 ~~l~~~ 111 (121)
T 2pl1_A 106 EEVMAR 111 (121)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877543
No 126
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=58.22 E-value=24 Score=33.49 Aligned_cols=107 Identities=10% Similarity=0.065 Sum_probs=60.4
Q ss_pred hhHhHHHHHhCCcEEEEcCcc-hhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEE
Q 015764 60 KQVMTAAVERGWNTFVFLSEN-QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVI 138 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~~-~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vvv 138 (401)
.+.+..|++.|+|.+.+..++ .+..+.+.+ .|.+ +.+.+.+.++...+.. ..+|++++
T Consensus 78 ~~~~~~a~~~g~d~V~~~~g~p~~~i~~l~~-----------------~g~~--v~~~v~~~~~a~~~~~--~GaD~i~v 136 (332)
T 2z6i_A 78 EDIVDLVIEEGVKVVTTGAGNPSKYMERFHE-----------------AGII--VIPVVPSVALAKRMEK--IGADAVIA 136 (332)
T ss_dssp HHHHHHHHHTTCSEEEECSSCGGGTHHHHHH-----------------TTCE--EEEEESSHHHHHHHHH--TTCSCEEE
T ss_pred HHHHHHHHHCCCCEEEECCCChHHHHHHHHH-----------------cCCe--EEEEeCCHHHHHHHHH--cCCCEEEE
Confidence 578899999999999987543 222222211 1333 3346788877555443 35899999
Q ss_pred eCC--CCe--eeehhhhhhcccC-CCceEEEE--cCCHHHHHHHHHHhhcccCeEEEec
Q 015764 139 DLP--DWQ--VIPAENIVASFQG-SGKTVFAI--SKTPSEAQIFLEALEQGLGGIVLKV 190 (401)
Q Consensus 139 ~~~--DW~--iIPlENliA~~q~-~~~~l~a~--v~~~~eA~~al~~LE~G~DGVvl~~ 190 (401)
.+. +.. -.|.-.++.++.. .+..|++. ++|.+++..+ |+.|+|||.+-+
T Consensus 137 ~g~~~GG~~g~~~~~~ll~~i~~~~~iPViaaGGI~~~~~~~~a---l~~GAdgV~vGs 192 (332)
T 2z6i_A 137 EGMEAGGHIGKLTTMTLVRQVATAISIPVIAAGGIADGEGAAAG---FMLGAEAVQVGT 192 (332)
T ss_dssp ECTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHH---HHTTCSEEEECH
T ss_pred ECCCCCCCCCCccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHH---HHcCCCEEEecH
Confidence 653 111 1222234433321 12345543 5566666554 457999999864
No 127
>1gpp_A Endonuclease PI-SCEI; homing, protein splicing; 1.35A {Saccharomyces cerevisiae} SCOP: b.86.1.2
Probab=58.22 E-value=7.4 Score=37.12 Aligned_cols=32 Identities=25% Similarity=0.492 Sum_probs=26.9
Q ss_pred eEEEecCCceeeeeeccCCCeEEEEcCCCCeeEE
Q 015764 282 AYVLVPGGKTCYLSELKSGKEVIVVDQKGRQRTA 315 (401)
Q Consensus 282 aYv~~pggkT~YLSEL~sG~eVLvVd~~G~tR~~ 315 (401)
.=|+|.+|..+-..+++.||+||. .||..|.+
T Consensus 16 T~VLMADGS~K~IEdI~vGD~Vmg--~DG~pR~V 47 (237)
T 1gpp_A 16 TNVLMADGSIECIENIEVGNKVMG--KDGRPREV 47 (237)
T ss_dssp CEEEBTTSCEEEGGGCCTTCEEEB--TTSSEEEE
T ss_pred CEEEEeCCCcceeeecccCCEEec--CCCCcceE
Confidence 358999999999999999999987 55666655
No 128
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=57.30 E-value=36 Score=25.48 Aligned_cols=81 Identities=12% Similarity=0.046 Sum_probs=46.3
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
...+.++.-.... ....+.++++..-.. ..--.++..+.. ....++...... +......+++.|+++.+.+|-
T Consensus 31 ~~~~~~~a~~~~~-~~~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~~~~ii~~s~~~-~~~~~~~~~~~ga~~~l~Kp~ 107 (127)
T 2jba_A 31 EAEDYDSAVNQLN-EPWPDLILLAWMLPG-GSGIQFIKHLRRESMTRDIPVVMLTARG-EEEDRVRGLETGADDCITKPF 107 (127)
T ss_dssp EECSHHHHHTTCS-SSCCSEEEEESEETT-EEHHHHHHHHHTSTTTTTSCEEEEEETT-HHHHHHTTCCCSCSEEEEESC
T ss_pred EeCCHHHHHHHHh-ccCCCEEEEecCCCC-CCHHHHHHHHHhCcccCCCCEEEEeCCC-CHHHHHHHHhcCCCeEEeCCC
Confidence 3555554333222 224677777432111 122234555543 345566555443 345667899999999999999
Q ss_pred CHHHHHHH
Q 015764 192 DVKAVLAL 199 (401)
Q Consensus 192 d~~ev~~l 199 (401)
+++++.+.
T Consensus 108 ~~~~l~~~ 115 (127)
T 2jba_A 108 SPKELVAR 115 (127)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 99887543
No 129
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=57.20 E-value=44 Score=26.97 Aligned_cols=74 Identities=16% Similarity=0.130 Sum_probs=41.0
Q ss_pred ecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC-CCceEEEEcCCH-HHHHHHHHHhhcccCeEEEecCC
Q 015764 117 VSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG-SGKTVFAISKTP-SEAQIFLEALEQGLGGIVLKVED 192 (401)
Q Consensus 117 v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~-~~~~l~a~v~~~-~eA~~al~~LE~G~DGVvl~~~d 192 (401)
..+.++.-..... ...+.+|++..-.. ..--.++..+.. ....++...... .+.+....+++.|+++++.+|-+
T Consensus 57 ~~~~~~al~~l~~-~~~dlvilD~~l~~-~~g~~l~~~lr~~~~~~ii~~s~~~~~~~~~~~~~~~~ga~~~l~KP~~ 132 (164)
T 3t8y_A 57 AKDGLEAVEKAIE-LKPDVITMDIEMPN-LNGIEALKLIMKKAPTRVIMVSSLTEEGAAITIEALRNGAVDFITKPHG 132 (164)
T ss_dssp ESSHHHHHHHHHH-HCCSEEEECSSCSS-SCHHHHHHHHHHHSCCEEEEEESSCCTTCHHHHHHHHTTCCEEEECSSS
T ss_pred cCCHHHHHHHhcc-CCCCEEEEeCCCCC-CCHHHHHHHHHhcCCceEEEEecCCccchHHHHHHHHcCcCEEEeCCCC
Confidence 5555543332222 24677888533211 111223333221 124566555533 34567788999999999999998
No 130
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=57.10 E-value=12 Score=34.00 Aligned_cols=31 Identities=10% Similarity=0.112 Sum_probs=27.1
Q ss_pred CCCcEEEEEe-CchhHhHHHHHhCCcEEEEcC
Q 015764 48 SKPKRVWIWT-ESKQVMTAAVERGWNTFVFLS 78 (401)
Q Consensus 48 ~~~K~vWiw~-~~K~~vt~AlEsG~~~~v~~~ 78 (401)
...+.||+|| .+++.+...++.|+|+|+.+.
T Consensus 208 ~~G~~v~~WTvn~~~~~~~l~~~GVdgIiTD~ 239 (252)
T 3qvq_A 208 AAGYKVLAFTINDESLALKLYNQGLDAVFSDY 239 (252)
T ss_dssp HTTCEEEEECCCCHHHHHHHHHTTCCEEEESS
T ss_pred HCCCEEEEEcCCCHHHHHHHHHcCCCEEEeCC
Confidence 4567899999 679999999999999999865
No 131
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=56.84 E-value=67 Score=24.91 Aligned_cols=66 Identities=11% Similarity=0.188 Sum_probs=38.6
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC--CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 132 QAENIVIDLPDWQVIPAENIVASFQG--SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~--~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
..+.++++..-.. ..--.++..+.. ....++..... .+......+++.|+++.+.+|-+++++.+.
T Consensus 48 ~~dlvllD~~l~~-~~g~~l~~~l~~~~~~~~ii~ls~~-~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~ 115 (137)
T 3cfy_A 48 KPQLIILDLKLPD-MSGEDVLDWINQNDIPTSVIIATAH-GSVDLAVNLIQKGAEDFLEKPINADRLKTS 115 (137)
T ss_dssp CCSEEEECSBCSS-SBHHHHHHHHHHTTCCCEEEEEESS-CCHHHHHHHHHTTCSEEEESSCCHHHHHHH
T ss_pred CCCEEEEecCCCC-CCHHHHHHHHHhcCCCCCEEEEEec-CcHHHHHHHHHCCccEEEeCCCCHHHHHHH
Confidence 4577777432111 111223333322 23455555443 334566788999999999999999887654
No 132
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=56.80 E-value=40 Score=29.32 Aligned_cols=81 Identities=10% Similarity=0.112 Sum_probs=47.1
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC--CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG--SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~--~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (401)
...+.++.-..... ...|.++++..-.. ..--.++..+.. ....++..... .+......+++.|+|+.+.+|-++
T Consensus 52 ~~~~~~~al~~~~~-~~~dlvllD~~lp~-~~g~~~~~~lr~~~~~~~ii~lt~~-~~~~~~~~~~~~Ga~~yl~Kp~~~ 128 (250)
T 3r0j_A 52 TATNGAQALDRARE-TRPDAVILDVXMPG-MDGFGVLRRLRADGIDAPALFLTAR-DSLQDKIAGLTLGGDDYVTKPFSL 128 (250)
T ss_dssp EESSHHHHHHHHHH-HCCSEEEEESCCSS-SCHHHHHHHHHHTTCCCCEEEEECS-TTHHHHHHHHTSTTCEEEESSCCH
T ss_pred EECCHHHHHHHHHh-CCCCEEEEeCCCCC-CCHHHHHHHHHhcCCCCCEEEEECC-CCHHHHHHHHHcCCcEEEeCCCCH
Confidence 35566553333222 24688888543221 122234444332 24456555443 344556788999999999999999
Q ss_pred HHHHHH
Q 015764 194 KAVLAL 199 (401)
Q Consensus 194 ~ev~~l 199 (401)
+++.+.
T Consensus 129 ~~L~~~ 134 (250)
T 3r0j_A 129 EEVVAR 134 (250)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887644
No 133
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=56.69 E-value=52 Score=25.43 Aligned_cols=81 Identities=9% Similarity=0.081 Sum_probs=45.9
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
...+.++.-.... ....+.+|++..-.. ..--.++..+.. ....++...... +......+++.|+++++.+|-
T Consensus 36 ~~~~~~~a~~~l~-~~~~dlii~D~~l~~-~~g~~~~~~lr~~~~~~~~pii~~s~~~-~~~~~~~~~~~ga~~~l~Kp~ 112 (144)
T 3kht_A 36 FVDNGAKALYQVQ-QAKYDLIILDIGLPI-ANGFEVMSAVRKPGANQHTPIVILTDNV-SDDRAKQCMAAGASSVVDKSS 112 (144)
T ss_dssp EESSHHHHHHHHT-TCCCSEEEECTTCGG-GCHHHHHHHHHSSSTTTTCCEEEEETTC-CHHHHHHHHHTTCSEEEECCT
T ss_pred EECCHHHHHHHhh-cCCCCEEEEeCCCCC-CCHHHHHHHHHhcccccCCCEEEEeCCC-CHHHHHHHHHcCCCEEEECCC
Confidence 3455554333222 234677777432111 122234444443 345566655443 345567788999999999999
Q ss_pred -CHHHHHHH
Q 015764 192 -DVKAVLAL 199 (401)
Q Consensus 192 -d~~ev~~l 199 (401)
+++++.+.
T Consensus 113 ~~~~~l~~~ 121 (144)
T 3kht_A 113 NNVTDFYGR 121 (144)
T ss_dssp TSHHHHHHH
T ss_pred CcHHHHHHH
Confidence 98877644
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=56.65 E-value=1.5e+02 Score=29.43 Aligned_cols=167 Identities=10% Similarity=0.037 Sum_probs=93.1
Q ss_pred HHHHHhhcccCeEEEecC------CHHHHHHHHHhhcccccccceeeeeEE--EEEEEEEcC-CcceEEEeecCCCCCCc
Q 015764 174 IFLEALEQGLGGIVLKVE------DVKAVLALKEYFDGRNEVSNLLSLMKA--TVTRVDVAG-MGDRVCVDLCSLMRPGE 244 (401)
Q Consensus 174 ~al~~LE~G~DGVvl~~~------d~~ev~~l~~~~~~~~~~~~~l~L~~a--tVt~V~~vG-mGDRVCVDtcsll~~GE 244 (401)
.++..+..|..| .+.+- +.+|+.+|.+|+.........+.+... .-+...+.. .+.+.|. .+.|+.
T Consensus 75 ~l~~~i~~G~~~-~Mp~~~~~~~ls~~ei~~l~~yl~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~----~~~p~~ 149 (543)
T 1nir_A 75 YLEALITYGTPL-GMPNWGSSGELSKEQITLMAKYIQHTPPQPPEWGMPEMRESWKVLVKPEDRPKKQLN----DLDLPN 149 (543)
T ss_dssp HHHHHHHHCCSS-SCCCSTTTTSSCHHHHHHHHHHTTSCCCBCCCCCHHHHHHHCEESSCGGGSCSSCCS----CCCGGG
T ss_pred HHHHHHHcCCCC-CCCCcccccCCCHHHHHHHHHHHHhcccCCCccchhhhhhhhccccccccCCccccc----ccCCCC
Confidence 344555556545 33322 578999999999665443333332211 111122222 3455543 356665
Q ss_pred eEEEeccCce-EEEEeeccccCCCCCCCCeeeecC-CceeEEEecCCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEE
Q 015764 245 GLLVGSFARG-LFLVHSECLESNYIASRPFRVNAG-PVHAYVLVPGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKI 322 (401)
Q Consensus 245 GmLVGS~s~g-lFLVhsEt~es~Yva~RPFRVNAG-aVHaYv~~pggkT~YLSEL~sG~eVLvVd~~G~tR~~~VGRvKI 322 (401)
=++|.++..+ +.++..+|.+. + -++..| ++|+-...|+|++-|.+-.. +.|.+.|.+..+. ..+.+++.
T Consensus 150 ~~~vs~~~d~~V~v~D~~t~~~--~----~~i~~g~~~~~v~~spdg~~l~v~~~d--~~V~v~D~~~~t~-~~~~~i~~ 220 (543)
T 1nir_A 150 LFSVTLRDAGQIALVDGDSKKI--V----KVIDTGYAVHISRMSASGRYLLVIGRD--ARIDMIDLWAKEP-TKVAEIKI 220 (543)
T ss_dssp EEEEEEGGGTEEEEEETTTCCE--E----EEEECSTTEEEEEECTTSCEEEEEETT--SEEEEEETTSSSC-EEEEEEEC
T ss_pred EEEEEEcCCCeEEEEECCCceE--E----EEEecCcccceEEECCCCCEEEEECCC--CeEEEEECcCCCC-cEEEEEec
Confidence 5666666554 55555554321 0 122222 37877788999999998764 9999999842222 23566666
Q ss_pred eccceeEEEEEecCC----CCeEEEEEeEecceEEEecCC
Q 015764 323 ESRPLILVEAKTNSG----DQTLYGIILQNAETVALVSPC 358 (401)
Q Consensus 323 E~RPLlLVeAe~~~~----~G~~~sviLQnAETIRLv~p~ 358 (401)
...|-=+ .. +. +|+.+-+--..+.+|+++...
T Consensus 221 g~~p~~v---a~-sp~~~~dg~~l~v~~~~~~~v~v~D~~ 256 (543)
T 1nir_A 221 GIEARSV---ES-SKFKGYEDRYTIAGAYWPPQFAIMDGE 256 (543)
T ss_dssp CSEEEEE---EE-CCSTTCTTTEEEEEEEESSEEEEEETT
T ss_pred CCCcceE---Ee-CCCcCCCCCEEEEEEccCCeEEEEecc
Confidence 6655322 12 44 677655555557888888654
No 135
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=56.63 E-value=17 Score=32.52 Aligned_cols=102 Identities=20% Similarity=0.232 Sum_probs=55.5
Q ss_pred eeeEEEEEEEEEcCCcceEEEeec----CCCCCCceEEEeccCceEEEEeeccccCCCCCCCCeeee----cCCceeEEE
Q 015764 214 SLMKATVTRVDVAGMGDRVCVDLC----SLMRPGEGLLVGSFARGLFLVHSECLESNYIASRPFRVN----AGPVHAYVL 285 (401)
Q Consensus 214 ~L~~atVt~V~~vGmGDRVCVDtc----sll~~GEGmLVGS~s~glFLVhsEt~es~Yva~RPFRVN----AGaVHaYv~ 285 (401)
...+++|++++.+.- |-..+-.. --++||+=+.+--...+ +. ..|||=+- .+-+.=++.
T Consensus 18 ~~~~~~V~~~~~~~~-~~~~~~l~~~~~~~~~pGQ~v~l~~~~~~------~~------~~r~ySi~s~~~~~~~~~~v~ 84 (271)
T 4fk8_A 18 KFDTATVLSVHHWTD-TLFSFTCTRDQALRFNNGEFTMVGLEVDG------KP------LTRAYSIVSPNYEEHLEFFSI 84 (271)
T ss_dssp CEEEEEEEEEEEEET-TEEEEEECCCTTCCCCTTCEEEEEEEETT------EE------EEEEEECCSCTTSSSEEEEEE
T ss_pred cceeEEEEEEEEcCC-CEEEEEEEcCCCCCcCCCCEEEEEccCCC------ce------eeeeEeccCCCCCCcEEEEEE
Confidence 467889999998863 32333221 12345543332211111 11 23444442 233333333
Q ss_pred -ec-CCceeeeeeccCCCeEEEE-cCCCCeeEEeeeeEEEeccceeEEEE
Q 015764 286 -VP-GGKTCYLSELKSGKEVIVV-DQKGRQRTAVVGRVKIESRPLILVEA 332 (401)
Q Consensus 286 -~p-ggkT~YLSEL~sG~eVLvV-d~~G~tR~~~VGRvKIE~RPLlLVeA 332 (401)
.| |.-|+||..|+.||+|.+- ...|+...... -..+|++||=+
T Consensus 85 ~~~~G~~s~~l~~l~~Gd~v~v~~gP~G~~~~~~~----~~~~~~vliag 130 (271)
T 4fk8_A 85 KVQNGPLTSRLQHLKVGDPVLIGKKPTGTLVADNL----LPGKTLWMLST 130 (271)
T ss_dssp CCTTCTTHHHHTTCCTTCEEEEESCCBCSCCGGGB----CCCSEEEEEEC
T ss_pred EECCCchhhHHhcCCCCCEEEEecCCCcceecCCc----CCCCeEEEEEC
Confidence 34 5679999999999999998 88886532100 02477877744
No 136
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=56.30 E-value=13 Score=33.75 Aligned_cols=31 Identities=13% Similarity=0.207 Sum_probs=26.9
Q ss_pred CCCcEEEEEe-CchhHhHHHHHhCCcEEEEcC
Q 015764 48 SKPKRVWIWT-ESKQVMTAAVERGWNTFVFLS 78 (401)
Q Consensus 48 ~~~K~vWiw~-~~K~~vt~AlEsG~~~~v~~~ 78 (401)
...+.|++|| .+++.|...++.|+|+|+.+.
T Consensus 194 ~~G~~v~~WTVn~~~~~~~l~~~GVdgIiTD~ 225 (238)
T 3no3_A 194 VLGMTSNVWTVDDPKLMEEMIDMGVDFITTDL 225 (238)
T ss_dssp HTTCEEEEECCCSHHHHHHHHHHTCSEEEESC
T ss_pred HCCCEEEEECCCCHHHHHHHHHcCCCEEECCC
Confidence 4567899999 578999999999999999865
No 137
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=56.11 E-value=59 Score=28.77 Aligned_cols=28 Identities=7% Similarity=0.020 Sum_probs=21.4
Q ss_pred EEEEEe--CchhHhHHHHHhCCcEEEEcCc
Q 015764 52 RVWIWT--ESKQVMTAAVERGWNTFVFLSE 79 (401)
Q Consensus 52 ~vWiw~--~~K~~vt~AlEsG~~~~v~~~~ 79 (401)
.+++-. .+.+.+..+++.|+|.+++...
T Consensus 76 pvi~~ggI~~~~~~~~~~~~Gad~V~lg~~ 105 (253)
T 1thf_D 76 PFTVGGGIHDFETASELILRGADKVSINTA 105 (253)
T ss_dssp CEEEESSCCSHHHHHHHHHTTCSEEEESHH
T ss_pred CEEEeCCCCCHHHHHHHHHcCCCEEEEChH
Confidence 366633 3567799999999999998764
No 138
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=55.51 E-value=41 Score=26.39 Aligned_cols=81 Identities=17% Similarity=0.200 Sum_probs=46.8
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC--CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG--SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~--~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (401)
...+.++.-..... ...+.+|++..-.. ..--.++..+.. ....++......+ ......+++.|+++++.+|-++
T Consensus 36 ~~~~~~~a~~~l~~-~~~dlii~D~~l~~-~~g~~~~~~l~~~~~~~~ii~ls~~~~-~~~~~~~~~~g~~~~l~kp~~~ 112 (153)
T 3cz5_A 36 EAADAGEAYRLYRE-TTPDIVVMDLTLPG-PGGIEATRHIRQWDGAARILIFTMHQG-SAFALKAFEAGASGYVTKSSDP 112 (153)
T ss_dssp EESSHHHHHHHHHT-TCCSEEEECSCCSS-SCHHHHHHHHHHHCTTCCEEEEESCCS-HHHHHHHHHTTCSEEEETTSCT
T ss_pred EeCCHHHHHHHHhc-CCCCEEEEecCCCC-CCHHHHHHHHHHhCCCCeEEEEECCCC-HHHHHHHHHCCCcEEEecCCCH
Confidence 45666654333322 24677777433211 122233333322 2446666655433 4566788999999999999998
Q ss_pred HHHHHH
Q 015764 194 KAVLAL 199 (401)
Q Consensus 194 ~ev~~l 199 (401)
+++.+.
T Consensus 113 ~~L~~~ 118 (153)
T 3cz5_A 113 AELVQA 118 (153)
T ss_dssp THHHHH
T ss_pred HHHHHH
Confidence 877644
No 139
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=55.33 E-value=14 Score=35.34 Aligned_cols=41 Identities=12% Similarity=-0.071 Sum_probs=35.3
Q ss_pred eEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHHhhc
Q 015764 161 TVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFD 204 (401)
Q Consensus 161 ~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l~~~~~ 204 (401)
+|..++.|.+||+.+ ++.|+|.|+|+.-+++++++..+.+.
T Consensus 196 ~I~Vev~t~eea~ea---l~aGaD~I~LDn~~~~~~~~~v~~l~ 236 (284)
T 1qpo_A 196 PCEVEVDSLEQLDAV---LPEKPELILLDNFAVWQTQTAVQRRD 236 (284)
T ss_dssp CEEEEESSHHHHHHH---GGGCCSEEEEETCCHHHHHHHHHHHH
T ss_pred CEEEEeCCHHHHHHH---HHcCCCEEEECCCCHHHHHHHHHHhh
Confidence 899999999888765 56799999999999999988777663
No 140
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=54.98 E-value=8.7 Score=34.93 Aligned_cols=123 Identities=15% Similarity=0.141 Sum_probs=64.1
Q ss_pred hhHhHHHHHhCCcEEEEcCc--chhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEE
Q 015764 60 KQVMTAAVERGWNTFVFLSE--NQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIV 137 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~--~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vv 137 (401)
.+.+..|++.|+|.+.+..+ ..+...++-+ .+.+.|+.++..+.-.++.+ .+.......|++.
T Consensus 75 ~~~i~~~~~aGadgv~vh~e~~~~~~~~~~~~-------------~i~~~g~~~gv~~~p~t~~e--~~~~~~~~~D~v~ 139 (230)
T 1tqj_A 75 EKYVEDFAKAGADIISVHVEHNASPHLHRTLC-------------QIRELGKKAGAVLNPSTPLD--FLEYVLPVCDLIL 139 (230)
T ss_dssp GGTHHHHHHHTCSEEEEECSTTTCTTHHHHHH-------------HHHHTTCEEEEEECTTCCGG--GGTTTGGGCSEEE
T ss_pred HHHHHHHHHcCCCEEEECcccccchhHHHHHH-------------HHHHcCCcEEEEEeCCCcHH--HHHHHHhcCCEEE
Confidence 34679999999999998876 2111111111 12334677777554455543 3444444678887
Q ss_pred EeCC-----CCeeee--hhhhhhcccCC------CceE--EEEcCCHHHHHHHHHHhhcccCeEEEe-----cCCH-HHH
Q 015764 138 IDLP-----DWQVIP--AENIVASFQGS------GKTV--FAISKTPSEAQIFLEALEQGLGGIVLK-----VEDV-KAV 196 (401)
Q Consensus 138 v~~~-----DW~iIP--lENliA~~q~~------~~~l--~a~v~~~~eA~~al~~LE~G~DGVvl~-----~~d~-~ev 196 (401)
+-.- .-+.+| +|.| +++... +..| ...++. +. +-.+.+.|+||+++- .+|+ +.+
T Consensus 140 ~msv~pg~ggq~~~~~~~~~i-~~lr~~~~~~~~~~~I~v~GGI~~-~~---~~~~~~aGad~vvvGSai~~a~d~~~~~ 214 (230)
T 1tqj_A 140 IMSVNPGFGGQSFIPEVLPKI-RALRQMCDERGLDPWIEVDGGLKP-NN---TWQVLEAGANAIVAGSAVFNAPNYAEAI 214 (230)
T ss_dssp EESSCC----CCCCGGGHHHH-HHHHHHHHHHTCCCEEEEESSCCT-TT---THHHHHHTCCEEEESHHHHTSSCHHHHH
T ss_pred EEEeccccCCccCcHHHHHHH-HHHHHHHHhcCCCCcEEEECCcCH-HH---HHHHHHcCCCEEEECHHHHCCCCHHHHH
Confidence 6433 222343 3332 222111 2223 233333 33 444567899999985 3466 445
Q ss_pred HHHHHh
Q 015764 197 LALKEY 202 (401)
Q Consensus 197 ~~l~~~ 202 (401)
++|++.
T Consensus 215 ~~l~~~ 220 (230)
T 1tqj_A 215 AGVRNS 220 (230)
T ss_dssp HHHHTC
T ss_pred HHHHHH
Confidence 555543
No 141
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=54.67 E-value=27 Score=27.15 Aligned_cols=67 Identities=13% Similarity=0.211 Sum_probs=39.9
Q ss_pred CCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 131 GQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 131 ~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
...+.+|++..-.. ..--.++..+. .....++..... .+......+++.|+++++.+|-+++++.+.
T Consensus 66 ~~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~~ii~lt~~-~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~ 134 (146)
T 4dad_A 66 DAFDILMIDGAALD-TAELAAIEKLSRLHPGLTCLLVTTD-ASSQTLLDAMRAGVRDVLRWPLEPRALDDA 134 (146)
T ss_dssp TTCSEEEEECTTCC-HHHHHHHHHHHHHCTTCEEEEEESC-CCHHHHHHHHTTTEEEEEESSCCHHHHHHH
T ss_pred CCCCEEEEeCCCCC-ccHHHHHHHHHHhCCCCcEEEEeCC-CCHHHHHHHHHhCCceeEcCCCCHHHHHHH
Confidence 35677777543211 11112232222 224456655443 344567788999999999999999887654
No 142
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=54.57 E-value=16 Score=32.73 Aligned_cols=123 Identities=14% Similarity=0.125 Sum_probs=61.6
Q ss_pred chhHhHHHHHhCCcEEEEcCcch-hh-HhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccC---CC
Q 015764 59 SKQVMTAAVERGWNTFVFLSENQ-QL-AIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADG---QA 133 (401)
Q Consensus 59 ~K~~vt~AlEsG~~~~v~~~~~~-~~-~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~---~~ 133 (401)
..+.+..+++.|+|.+.+..+.- +. .+.+.. +.+.|+.++..+.-.++. +.+..... ..
T Consensus 76 ~~~~i~~~~~agad~v~vH~~~~~~~~~~~~~~--------------i~~~g~~igv~~~p~t~~--e~~~~~~~~~~~~ 139 (228)
T 1h1y_A 76 PSDYVEPLAKAGASGFTFHIEVSRDNWQELIQS--------------IKAKGMRPGVSLRPGTPV--EEVFPLVEAENPV 139 (228)
T ss_dssp GGGGHHHHHHHTCSEEEEEGGGCTTTHHHHHHH--------------HHHTTCEEEEEECTTSCG--GGGHHHHHSSSCC
T ss_pred HHHHHHHHHHcCCCEEEECCCCcccHHHHHHHH--------------HHHcCCCEEEEEeCCCCH--HHHHHHHhcCCCC
Confidence 34569999999999998876421 11 111111 122356666433223332 33333333 67
Q ss_pred CeEEEeCC---------CCeeeeh-hhhhhcccCCCceEE--EEcCCHHHHHHHHHHhhcccCeEEEe-----cCCH-HH
Q 015764 134 ENIVIDLP---------DWQVIPA-ENIVASFQGSGKTVF--AISKTPSEAQIFLEALEQGLGGIVLK-----VEDV-KA 195 (401)
Q Consensus 134 ~~vvv~~~---------DW~iIPl-ENliA~~q~~~~~l~--a~v~~~~eA~~al~~LE~G~DGVvl~-----~~d~-~e 195 (401)
|++.+... +|+.++. +.+-+... +..++ ..++. +.++ ++++.|+|++++- .+|+ ..
T Consensus 140 d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~~--~~pi~v~GGI~~-~ni~---~~~~aGaD~vvvGsai~~~~d~~~~ 213 (228)
T 1h1y_A 140 ELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYP--SLDIEVDGGLGP-STID---VAASAGANCIVAGSSIFGAAEPGEV 213 (228)
T ss_dssp SEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCT--TSEEEEESSCST-TTHH---HHHHHTCCEEEESHHHHTSSCHHHH
T ss_pred CEEEEEeecCCCCcccCCHHHHHHHHHHHHhcC--CCCEEEECCcCH-HHHH---HHHHcCCCEEEECHHHHCCCCHHHH
Confidence 89988432 2332221 11111111 22333 23433 4443 3455599999985 3576 45
Q ss_pred HHHHHHhh
Q 015764 196 VLALKEYF 203 (401)
Q Consensus 196 v~~l~~~~ 203 (401)
+++|++.+
T Consensus 214 ~~~l~~~~ 221 (228)
T 1h1y_A 214 ISALRKSV 221 (228)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666654
No 143
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=54.35 E-value=17 Score=34.37 Aligned_cols=50 Identities=12% Similarity=0.176 Sum_probs=37.8
Q ss_pred hhhhhcccCCCceEEEE-cCCHHH-------HHHHHHHhhcccCeEEEecCCHHHHHHHH
Q 015764 149 ENIVASFQGSGKTVFAI-SKTPSE-------AQIFLEALEQGLGGIVLKVEDVKAVLALK 200 (401)
Q Consensus 149 ENliA~~q~~~~~l~a~-v~~~~e-------A~~al~~LE~G~DGVvl~~~d~~ev~~l~ 200 (401)
..+|++++..+-+|++- +++.++ ++.+-..++.|||||. ||+|..+.++-
T Consensus 218 ~~~V~~ah~~G~~V~vWTv~t~d~~~~~~~~~~~~~~L~~~GVDgIi--TD~P~~l~~~L 275 (292)
T 3mz2_A 218 REVIDMLHERGVMCMISTAPSDDKLSTPESRAEAYRMIIRQGVDIIE--SDRPIEVAEAI 275 (292)
T ss_dssp HHHHHHHHHTTBCEEEECTTTGGGSSSHHHHHHHHHHHHHTTCCEEE--ESCHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEeCCCcchhhhccccHHHHHHHHHcCCCEEE--eCCHHHHHHHH
Confidence 46888888888888775 566542 5677788999999987 88998776443
No 144
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=54.28 E-value=31 Score=26.34 Aligned_cols=67 Identities=10% Similarity=0.120 Sum_probs=39.7
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC-CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 132 QAENIVIDLPDWQVIPAENIVASFQG-SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~-~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
..+.++++..-..-..-..++..+.. ....++...... +......+++.|+++++.+|-+++++.+.
T Consensus 54 ~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~-~~~~~~~~~~~g~~~~l~kp~~~~~l~~~ 121 (140)
T 3cg0_A 54 RPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQ-DVETFQRAKRVNPFGYLAKPVAADTLHRS 121 (140)
T ss_dssp CCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCC-CHHHHHHHHTTCCSEEEEESCCHHHHHHH
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCC-CHHHHHHHHhcCCCEEEeCCCCHHHHHHH
Confidence 46777775332111122233333322 245566655543 34556678999999999999999887644
No 145
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=54.23 E-value=63 Score=25.35 Aligned_cols=80 Identities=9% Similarity=0.083 Sum_probs=46.3
Q ss_pred ecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHH
Q 015764 117 VSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVK 194 (401)
Q Consensus 117 v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ 194 (401)
..+.++.-..... ...+.++++..-.. ..--.++..+. .....++..... .+......+++.|+++++.+|-+++
T Consensus 33 ~~~~~~a~~~l~~-~~~dliild~~l~~-~~g~~~~~~l~~~~~~~pii~ls~~-~~~~~~~~~~~~g~~~~l~kP~~~~ 109 (155)
T 1qkk_A 33 FASATEALAGLSA-DFAGIVISDIRMPG-MDGLALFRKILALDPDLPMILVTGH-GDIPMAVQAIQDGAYDFIAKPFAAD 109 (155)
T ss_dssp ESCHHHHHHTCCT-TCCSEEEEESCCSS-SCHHHHHHHHHHHCTTSCEEEEECG-GGHHHHHHHHHTTCCEEEESSCCHH
T ss_pred ECCHHHHHHHHHh-CCCCEEEEeCCCCC-CCHHHHHHHHHhhCCCCCEEEEECC-CChHHHHHHHhcCCCeEEeCCCCHH
Confidence 4555543332222 34677777543222 22223333332 234556665544 4456677889999999999999998
Q ss_pred HHHHH
Q 015764 195 AVLAL 199 (401)
Q Consensus 195 ev~~l 199 (401)
++...
T Consensus 110 ~L~~~ 114 (155)
T 1qkk_A 110 RLVQS 114 (155)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77544
No 146
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=54.12 E-value=14 Score=33.57 Aligned_cols=31 Identities=16% Similarity=0.230 Sum_probs=26.8
Q ss_pred CCCcEEEEEe-CchhHhHHHHHhCCcEEEEcC
Q 015764 48 SKPKRVWIWT-ESKQVMTAAVERGWNTFVFLS 78 (401)
Q Consensus 48 ~~~K~vWiw~-~~K~~vt~AlEsG~~~~v~~~ 78 (401)
..-+.|++|| .+++.+...++.|+|+|+.+.
T Consensus 202 ~~G~~V~~WTvn~~~~~~~l~~~GVDgIiTD~ 233 (250)
T 3ks6_A 202 AAGLDFGCWAAHTPSQITKALDLGVKVFTTDR 233 (250)
T ss_dssp HTTCEEEEECCCSHHHHHHHHHHTCSEEEESC
T ss_pred HCCCEEEEEeCCCHHHHHHHHHcCCCEEEcCC
Confidence 4567899999 578999999999999999865
No 147
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=53.99 E-value=22 Score=27.37 Aligned_cols=67 Identities=9% Similarity=0.092 Sum_probs=44.0
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 132 QAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
..+.+|++..-. -..--.++..+.. ....++......+.......+++.|+++++.+|-+++++.+.
T Consensus 50 ~~dlvi~d~~l~-~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~ 120 (140)
T 3grc_A 50 PYAAMTVDLNLP-DQDGVSLIRALRRDSRTRDLAIVVVSANAREGELEFNSQPLAVSTWLEKPIDENLLILS 120 (140)
T ss_dssp CCSEEEECSCCS-SSCHHHHHHHHHTSGGGTTCEEEEECTTHHHHHHHHCCTTTCCCEEECSSCCHHHHHHH
T ss_pred CCCEEEEeCCCC-CCCHHHHHHHHHhCcccCCCCEEEEecCCChHHHHHHhhhcCCCEEEeCCCCHHHHHHH
Confidence 456677633211 1222234444432 356788888777777666689999999999999999877644
No 148
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=53.98 E-value=13 Score=33.27 Aligned_cols=113 Identities=12% Similarity=0.137 Sum_probs=55.6
Q ss_pred hhHhHHHHHhCCcEEEEcCcchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhh-hhhhccccCCCC-eEE
Q 015764 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQE-LQQLQPADGQAE-NIV 137 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~-~e~~~~~~~~~~-~vv 137 (401)
.+.+..|++.|+|.++++....+..+++-+. .++.|..+...+...++.+ ++.+.. .++ ++.
T Consensus 98 ~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~-------------~~~~g~~~~~~i~~~t~~e~~~~~~~---~~d~~i~ 161 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVVDLPVFHAKEFTEI-------------AREEGIKTVFLAAPNTPDERLKVIDD---MTTGFVY 161 (248)
T ss_dssp HHHHHHHHHHTCCEEEETTCCGGGHHHHHHH-------------HHHHTCEEEEEECTTCCHHHHHHHHH---HCSSEEE
T ss_pred HHHHHHHHHCCCCEEEECCCChhhHHHHHHH-------------HHHhCCCeEEEECCCCHHHHHHHHHh---cCCCeEE
Confidence 5899999999999999986432222222111 0111233333223333332 222222 234 543
Q ss_pred EeCC----CCe--eeeh-hhhhhcccCC-CceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 138 IDLP----DWQ--VIPA-ENIVASFQGS-GKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 138 v~~~----DW~--iIPl-ENliA~~q~~-~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
+-.. +-+ ..|. .+.++++... +..|++ .+++.++++.++ +.|+|||++-+.
T Consensus 162 ~~~~~G~~g~~~~~~~~~~~~i~~l~~~~~~pi~~~GGI~~~e~i~~~~---~~Gad~vivGsa 222 (248)
T 1geq_A 162 LVSLYGTTGAREEIPKTAYDLLRRAKRICRNKVAVGFGVSKREHVVSLL---KEGANGVVVGSA 222 (248)
T ss_dssp EECCC-------CCCHHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHH---HTTCSEEEECHH
T ss_pred EEECCccCCCCCCCChhHHHHHHHHHhhcCCCEEEEeecCCHHHHHHHH---HcCCCEEEEcHH
Confidence 3221 111 2231 2344444321 234444 567778877654 579999998763
No 149
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=53.77 E-value=11 Score=31.93 Aligned_cols=21 Identities=14% Similarity=0.349 Sum_probs=17.8
Q ss_pred CchhHhHHHHHhCCcEEEEcC
Q 015764 58 ESKQVMTAAVERGWNTFVFLS 78 (401)
Q Consensus 58 ~~K~~vt~AlEsG~~~~v~~~ 78 (401)
...+.+..|++.|++.++..+
T Consensus 63 ~~~~~~~~~~~~Ga~~~l~kp 83 (237)
T 3cwo_X 63 GQQAMVIEAIKAGAKDFIVNT 83 (237)
T ss_dssp STHHHHHHHHHTTCCEEEESH
T ss_pred CCHHHHHHHHHCCHHheEeCC
Confidence 347888999999999999765
No 150
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=53.34 E-value=56 Score=28.99 Aligned_cols=107 Identities=12% Similarity=0.198 Sum_probs=59.0
Q ss_pred CchhHhHHHHHhCCcEEEEcCcch---------hhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhcc
Q 015764 58 ESKQVMTAAVERGWNTFVFLSENQ---------QLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQP 128 (401)
Q Consensus 58 ~~K~~vt~AlEsG~~~~v~~~~~~---------~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~ 128 (401)
+..+++..+.+.|++.+.+...+. +.++++. ..--|+.+.+| |.++++.+.+..
T Consensus 31 ~~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~--~~~ipvi~~Gg---------------i~~~~~~~~~~~ 93 (241)
T 1qo2_A 31 DPVELVEKLIEEGFTLIHVVDLSNAIENSGENLPVLEKLS--EFAEHIQIGGG---------------IRSLDYAEKLRK 93 (241)
T ss_dssp CHHHHHHHHHHTTCCCEEEEEHHHHHHCCCTTHHHHHHGG--GGGGGEEEESS---------------CCSHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEecccccccCCchhHHHHHHHH--hcCCcEEEECC---------------CCCHHHHHHHHH
Confidence 346788999999999988864221 1222222 11113333333 678888777554
Q ss_pred ccCCCCeEEEeCCCCeeee----hhhhhhcccCCCceEE--EEcC---------------CHHHHHHHHHHhhcccCeEE
Q 015764 129 ADGQAENIVIDLPDWQVIP----AENIVASFQGSGKTVF--AISK---------------TPSEAQIFLEALEQGLGGIV 187 (401)
Q Consensus 129 ~~~~~~~vvv~~~DW~iIP----lENliA~~q~~~~~l~--a~v~---------------~~~eA~~al~~LE~G~DGVv 187 (401)
. .++.+++-.. .++ ++.+ .++. .+++ ..++ +.. +.+..+.+.|++.|+
T Consensus 94 -~-Gad~V~lg~~---~l~~p~~~~~~-~~~g---~~i~~~~d~~~~~v~~~g~~~~~~~~~~--e~~~~~~~~G~~~i~ 162 (241)
T 1qo2_A 94 -L-GYRRQIVSSK---VLEDPSFLKSL-REID---VEPVFSLDTRGGRVAFKGWLAEEEIDPV--SLLKRLKEYGLEEIV 162 (241)
T ss_dssp -T-TCCEEEECHH---HHHCTTHHHHH-HTTT---CEEEEEEEEETTEECCTTCSSCSCCCHH--HHHHHHHTTTCCEEE
T ss_pred -C-CCCEEEECch---HhhChHHHHHH-HHcC---CcEEEEEEecCCEEEECCceecCCCCHH--HHHHHHHhCCCCEEE
Confidence 3 4888888332 222 3334 3332 2332 2231 333 344556789999999
Q ss_pred EecCC
Q 015764 188 LKVED 192 (401)
Q Consensus 188 l~~~d 192 (401)
+++-+
T Consensus 163 ~t~~~ 167 (241)
T 1qo2_A 163 HTEIE 167 (241)
T ss_dssp EEETT
T ss_pred EEeec
Confidence 97743
No 151
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=52.29 E-value=33 Score=32.53 Aligned_cols=110 Identities=14% Similarity=0.193 Sum_probs=63.4
Q ss_pred chhHhHHHHHhCCcEEEEcCc-chhh-HhhccceeeeeeeeecCCccccCCCCeeEEEEEecChh--hhhhhccccCCCC
Q 015764 59 SKQVMTAAVERGWNTFVFLSE-NQQL-AIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQ--ELQQLQPADGQAE 134 (401)
Q Consensus 59 ~K~~vt~AlEsG~~~~v~~~~-~~~~-~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e--~~e~~~~~~~~~~ 134 (401)
+.+++.++.+.|.-++++... +.+. .+.+..+.... ++++++-+-+.++. +.-..+.. ...+
T Consensus 25 ~~~la~av~~aG~lG~i~~~~~~~~~~~~~i~~i~~~~-------------~~p~gvnl~~~~~~~~~~~~~a~~-~g~d 90 (332)
T 2z6i_A 25 DGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKSLT-------------DKPFGVNIMLLSPFVEDIVDLVIE-EGVK 90 (332)
T ss_dssp CHHHHHHHHHHTSBEEEECTTCCHHHHHHHHHHHHHHC-------------CSCEEEEECTTSTTHHHHHHHHHH-TTCS
T ss_pred cHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhc-------------CCCEEEEecCCCCCHHHHHHHHHH-CCCC
Confidence 478888889999877886432 2222 12222221100 12333322222332 21122222 3678
Q ss_pred eEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEec
Q 015764 135 NIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKV 190 (401)
Q Consensus 135 ~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~ 190 (401)
.|.+.+.. |. .++.++...+..++..+.+.++|+.+ .+.|+|+|++..
T Consensus 91 ~V~~~~g~----p~-~~i~~l~~~g~~v~~~v~~~~~a~~~---~~~GaD~i~v~g 138 (332)
T 2z6i_A 91 VVTTGAGN----PS-KYMERFHEAGIIVIPVVPSVALAKRM---EKIGADAVIAEG 138 (332)
T ss_dssp EEEECSSC----GG-GTHHHHHHTTCEEEEEESSHHHHHHH---HHTTCSCEEEEC
T ss_pred EEEECCCC----hH-HHHHHHHHcCCeEEEEeCCHHHHHHH---HHcCCCEEEEEC
Confidence 88887653 43 45666665677899999999988764 468999999964
No 152
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=52.20 E-value=43 Score=29.72 Aligned_cols=115 Identities=17% Similarity=0.159 Sum_probs=58.9
Q ss_pred chhHhHHHHHhCCcEEEEcCcc---------hhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccc
Q 015764 59 SKQVMTAAVERGWNTFVFLSEN---------QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPA 129 (401)
Q Consensus 59 ~K~~vt~AlEsG~~~~v~~~~~---------~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~ 129 (401)
-.+++..+.+.|++.+.+...+ .+..+++.+-.. -|+.+.+| |.++++.+.+...
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~-ipvi~~gg---------------I~~~~~~~~~~~~ 95 (253)
T 1thf_D 32 PVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQID-IPFTVGGG---------------IHDFETASELILR 95 (253)
T ss_dssp HHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTCC-SCEEEESS---------------CCSHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhCC-CCEEEeCC---------------CCCHHHHHHHHHc
Confidence 3677888889999987665322 111222222100 13333333 6788887776542
Q ss_pred cCCCCeEEEeCCCCee-eehhhhhhcccCCCceEEEEcC-----------CH------HHHHHHHHHhhcccCeEEEecC
Q 015764 130 DGQAENIVIDLPDWQV-IPAENIVASFQGSGKTVFAISK-----------TP------SEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 130 ~~~~~~vvv~~~DW~i-IPlENliA~~q~~~~~l~a~v~-----------~~------~eA~~al~~LE~G~DGVvl~~~ 191 (401)
.++.+++.....+- --++.++..+......+-..++ .. .-.+.+..+++.|+++|++.+-
T Consensus 96 --Gad~V~lg~~~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~ 173 (253)
T 1thf_D 96 --GADKVSINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSI 173 (253)
T ss_dssp --TCSEEEESHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEET
T ss_pred --CCCEEEEChHHHhChHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHHCCCCEEEEEec
Confidence 48888884431111 0145555554211111222221 11 1234455566789999999753
No 153
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=52.01 E-value=33 Score=31.36 Aligned_cols=108 Identities=16% Similarity=0.048 Sum_probs=60.5
Q ss_pred chhHhHHHHHhCCcEEEEcCcchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEE
Q 015764 59 SKQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVI 138 (401)
Q Consensus 59 ~K~~vt~AlEsG~~~~v~~~~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vvv 138 (401)
-.+++.++++.|++.+=++..+..-.+.+..+..--| +..+++ ..+.+.++.+.+.. . .+++++.
T Consensus 40 ~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~------------~~~iga-gtvl~~d~~~~A~~-a-GAd~v~~ 104 (225)
T 1mxs_A 40 ILPLADALAAGGIRTLEVTLRSQHGLKAIQVLREQRP------------ELCVGA-GTVLDRSMFAAVEA-A-GAQFVVT 104 (225)
T ss_dssp HHHHHHHHHHTTCCEEEEESSSTHHHHHHHHHHHHCT------------TSEEEE-ECCCSHHHHHHHHH-H-TCSSEEC
T ss_pred HHHHHHHHHHCCCCEEEEecCCccHHHHHHHHHHhCc------------ccEEee-CeEeeHHHHHHHHH-C-CCCEEEe
Confidence 3578999999999988887543221111221211001 122222 22556666554433 3 5788876
Q ss_pred eCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEec
Q 015764 139 DLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKV 190 (401)
Q Consensus 139 ~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~ 190 (401)
-..| .|+-..-. ..+..++..+.|++|+.. +++.|+|-|-+-|
T Consensus 105 p~~d---~~v~~~~~---~~g~~~i~G~~t~~e~~~---A~~~Gad~vk~FP 147 (225)
T 1mxs_A 105 PGIT---EDILEAGV---DSEIPLLPGISTPSEIMM---GYALGYRRFKLFP 147 (225)
T ss_dssp SSCC---HHHHHHHH---HCSSCEECEECSHHHHHH---HHTTTCCEEEETT
T ss_pred CCCC---HHHHHHHH---HhCCCEEEeeCCHHHHHH---HHHCCCCEEEEcc
Confidence 4433 22222222 233455556999999754 5689999998877
No 154
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=52.01 E-value=57 Score=24.60 Aligned_cols=79 Identities=13% Similarity=0.122 Sum_probs=43.1
Q ss_pred ecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccCC----CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCC
Q 015764 117 VSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGS----GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192 (401)
Q Consensus 117 v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~~----~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d 192 (401)
..+.++.-.... ....+.++++..-.. ..--.++..+... ...|+.......+ ....+++.|+++++.+|-+
T Consensus 36 ~~~~~~a~~~l~-~~~~dlii~d~~l~~-~~g~~~~~~l~~~~~~~~~~ii~~~~~~~~--~~~~~~~~g~~~~l~kP~~ 111 (132)
T 3lte_A 36 AHNGFDAGIKLS-TFEPAIMTLDLSMPK-LDGLDVIRSLRQNKVANQPKILVVSGLDKA--KLQQAVTEGADDYLEKPFD 111 (132)
T ss_dssp ESSHHHHHHHHH-HTCCSEEEEESCBTT-BCHHHHHHHHHTTTCSSCCEEEEECCSCSH--HHHHHHHHTCCEEECSSCC
T ss_pred eCCHHHHHHHHH-hcCCCEEEEecCCCC-CCHHHHHHHHHhcCccCCCeEEEEeCCChH--HHHHHHHhChHHHhhCCCC
Confidence 445544333222 234677777543211 1222344444332 2344444333333 5678899999999999999
Q ss_pred HHHHHHH
Q 015764 193 VKAVLAL 199 (401)
Q Consensus 193 ~~ev~~l 199 (401)
++++.+.
T Consensus 112 ~~~l~~~ 118 (132)
T 3lte_A 112 NDALLDR 118 (132)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9877543
No 155
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=51.94 E-value=34 Score=29.68 Aligned_cols=18 Identities=11% Similarity=0.187 Sum_probs=15.0
Q ss_pred hHhHHHHHhCCcEEEEcC
Q 015764 61 QVMTAAVERGWNTFVFLS 78 (401)
Q Consensus 61 ~~vt~AlEsG~~~~v~~~ 78 (401)
+.+..+++.|+|.+.+..
T Consensus 75 ~~i~~~~~~gad~v~vh~ 92 (220)
T 2fli_A 75 RYVEAFAQAGADIMTIHT 92 (220)
T ss_dssp GGHHHHHHHTCSEEEEEG
T ss_pred HHHHHHHHcCCCEEEEcc
Confidence 356999999999998854
No 156
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=51.87 E-value=35 Score=31.18 Aligned_cols=124 Identities=16% Similarity=0.169 Sum_probs=65.2
Q ss_pred hhHhHHHHHhCCcEEEEcCcchh-hHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEE
Q 015764 60 KQVMTAAVERGWNTFVFLSENQQ-LAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVI 138 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~~~~-~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vvv 138 (401)
.+.+..+.+.|+|.+.|..+.-+ ..+.+.. +++.|.+++..+.-.++ ++.+.......|+|++
T Consensus 77 ~~~i~~~~~aGad~itvH~Ea~~~~~~~i~~--------------i~~~G~k~gval~p~t~--~e~l~~~l~~~D~Vl~ 140 (228)
T 3ovp_A 77 EQWVKPMAVAGANQYTFHLEATENPGALIKD--------------IRENGMKVGLAIKPGTS--VEYLAPWANQIDMALV 140 (228)
T ss_dssp GGGHHHHHHHTCSEEEEEGGGCSCHHHHHHH--------------HHHTTCEEEEEECTTSC--GGGTGGGGGGCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEccCCchhHHHHHHH--------------HHHcCCCEEEEEcCCCC--HHHHHHHhccCCeEEE
Confidence 45688899999999998764211 1111111 12335566654433333 2333343445788876
Q ss_pred eCC-----CCeeee-----hhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEe-----cCCHH-HHHHHHHh
Q 015764 139 DLP-----DWQVIP-----AENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLK-----VEDVK-AVLALKEY 202 (401)
Q Consensus 139 ~~~-----DW~iIP-----lENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~-----~~d~~-ev~~l~~~ 202 (401)
-.- +-+.|| +..+-+... + ..+.+.--.. .+.+-.+.+.|+|++|.- .+||. .++++++.
T Consensus 141 msv~pGf~Gq~f~~~~l~ki~~lr~~~~--~-~~I~VdGGI~-~~t~~~~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~~ 216 (228)
T 3ovp_A 141 MTVEPGFGGQKFMEDMMPKVHWLRTQFP--S-LDIEVDGGVG-PDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNV 216 (228)
T ss_dssp ESSCTTTCSCCCCGGGHHHHHHHHHHCT--T-CEEEEESSCS-TTTHHHHHHHTCCEEEESHHHHTCSCHHHHHHHHHHH
T ss_pred eeecCCCCCcccCHHHHHHHHHHHHhcC--C-CCEEEeCCcC-HHHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHH
Confidence 332 334566 222222211 1 2233332222 355566789999999974 45774 46666665
Q ss_pred h
Q 015764 203 F 203 (401)
Q Consensus 203 ~ 203 (401)
+
T Consensus 217 ~ 217 (228)
T 3ovp_A 217 C 217 (228)
T ss_dssp H
T ss_pred H
Confidence 4
No 157
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15
Probab=51.75 E-value=29 Score=33.51 Aligned_cols=114 Identities=11% Similarity=0.116 Sum_probs=61.4
Q ss_pred EEEeCchhHhHHHHHhCCcEEEEcCcchh------hHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhc
Q 015764 54 WIWTESKQVMTAAVERGWNTFVFLSENQQ------LAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQ 127 (401)
Q Consensus 54 Wiw~~~K~~vt~AlEsG~~~~v~~~~~~~------~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~ 127 (401)
|.|--.....++-..+..|-+|+++.+-. ..+++. .++..|+++-.|+.+.+-|+-..-.
T Consensus 23 w~~~l~~~~~~~l~~~~yd~vViD~~~~g~~~~~~t~~~i~--------------~L~~~G~~viaYlSvGe~E~~R~y~ 88 (309)
T 2aam_A 23 WLYQLQNADPVEISSSGFEIAVIDYSKDGSESGEYSPEEIK--------------IMVDAGVVPVAYVNIGQAEDYRFYW 88 (309)
T ss_dssp CEEECSSCCHHHHHTSCCSEEEECSBSSSSGGGBCCHHHHH--------------HHHHTTCEEEEEEESSEEETTSTTC
T ss_pred EEEEeCCCChhhhhhcCCCEEEEcCCcccccccCCCHHHHH--------------HHHhCCCEEEEEEecccccccchhh
Confidence 55554333333333478999999875210 011111 1344588888999988866521111
Q ss_pred cccCCCCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHH----HHHHhhcccCeEEEecCCH
Q 015764 128 PADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQI----FLEALEQGLGGIVLKVEDV 193 (401)
Q Consensus 128 ~~~~~~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~----al~~LE~G~DGVvl~~~d~ 193 (401)
...|+.+|-.-|.....+=++.-+.-+.+++=-.. +-.++++|.|||-|++=|.
T Consensus 89 ------------~~~w~~~~~~~lg~~n~~W~ge~~vDi~~~~w~~i~~~rl~~~~~kG~DGvflDnvD~ 146 (309)
T 2aam_A 89 ------------KESWYTNTPEWLGEEDPAWPGNYFVKYWYNEWKEIVFSYLDRVIDQGFKGIYLDRIDS 146 (309)
T ss_dssp ------------CTHHHHSCCTTEEEEETTEEEEEEECTTSHHHHHHHHHHHHHHHHTTCSEEEEECTTH
T ss_pred ------------hhccccCCHHHhCccCCCCCCceEEecCCHHHHHHHHHHHHHHHHcCCCeEeecccch
Confidence 11222256655555433333445555555532111 1267889999999998774
No 158
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=51.69 E-value=49 Score=31.44 Aligned_cols=71 Identities=11% Similarity=0.047 Sum_probs=50.8
Q ss_pred ecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCC
Q 015764 117 VSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192 (401)
Q Consensus 117 v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d 192 (401)
+.++.++.++. ...+|.|++....-+-=-++.++.....-+-.++++++|.+|++.+ ++.|+|=|=+...|
T Consensus 129 i~d~~qi~ea~--~~GAD~VlLi~a~L~~~~l~~l~~~a~~lGl~~lvevh~~eEl~~A---~~~ga~iIGinnr~ 199 (272)
T 3tsm_A 129 LFDPYQVYEAR--SWGADCILIIMASVDDDLAKELEDTAFALGMDALIEVHDEAEMERA---LKLSSRLLGVNNRN 199 (272)
T ss_dssp CCSTHHHHHHH--HTTCSEEEEETTTSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHH---TTSCCSEEEEECBC
T ss_pred cCCHHHHHHHH--HcCCCEEEEcccccCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH---HhcCCCEEEECCCC
Confidence 56666665543 3468999988776543346778777666677899999999998765 57899966666443
No 159
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=51.68 E-value=26 Score=34.27 Aligned_cols=37 Identities=5% Similarity=0.009 Sum_probs=31.3
Q ss_pred CceEEEEcCCHHHHHHHHHHhhc-ccCeEEEecCCHHH
Q 015764 159 GKTVFAISKTPSEAQIFLEALEQ-GLGGIVLKVEDVKA 195 (401)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~-G~DGVvl~~~d~~e 195 (401)
+..|++-+.+++-...+-+++.. |+||+.+-+.|...
T Consensus 177 ~i~vi~mIEt~~av~nldeIaa~~~vD~l~iG~~DLs~ 214 (339)
T 1izc_A 177 HVCIIPQIESVKGVENVDAIAAMPEIHGLMFGPGDYMI 214 (339)
T ss_dssp HCEEEEEECSHHHHHTHHHHHTCTTCCCEEECHHHHHH
T ss_pred CceEEEEEChHHHHHHHHHHhcCCCCCEEEECHHHHHh
Confidence 35799999999999888898875 89999999987643
No 160
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=51.32 E-value=35 Score=31.64 Aligned_cols=127 Identities=15% Similarity=0.141 Sum_probs=66.4
Q ss_pred CchhHhHHHHHhCCcEEEEcCcchh-hHhhccceeeeeeeeecCCccccCC---------CCeeEEEEEecChhhhhhhc
Q 015764 58 ESKQVMTAAVERGWNTFVFLSENQQ-LAIDWSTIALLDPLFIKEGEVYDSG---------DRRVGSIIEVSTPQELQQLQ 127 (401)
Q Consensus 58 ~~K~~vt~AlEsG~~~~v~~~~~~~-~~~~~~~i~~i~~l~~~~g~~~~~~---------gk~v~~~~~v~~~e~~e~~~ 127 (401)
.....+..+.+.|+|.+.|..+.-+ ..+-+. .+.+. |+.++..+.-.++. +.+.
T Consensus 80 ~p~~~i~~~~~aGAd~itvH~ea~~~~~~~i~--------------~i~~~~~~~~~~~~g~~~gv~l~p~Tp~--~~l~ 143 (237)
T 3cu2_A 80 NQLEVAKAVVANGANLVTLQLEQYHDFALTIE--------------WLAKQKTTYANQVYPVLIGACLCPETPI--SELE 143 (237)
T ss_dssp CHHHHHHHHHHTTCSEEEEETTCTTSHHHHHH--------------HHTTCEEEETTEEEECEEEEEECTTSCG--GGGT
T ss_pred CHHHHHHHHHHcCCCEEEEecCCcccHHHHHH--------------HHHhcccccccccCCceEEEEEeCCChH--HHHH
Confidence 4467799999999999888764211 111111 12233 56666655444443 3444
Q ss_pred cccCCCCeEEE---e--CCCCeeee--hhhh---hhcccCCC-ceEEEEcCCHHHHHHHHHHhh--cccCeEEEecC---
Q 015764 128 PADGQAENIVI---D--LPDWQVIP--AENI---VASFQGSG-KTVFAISKTPSEAQIFLEALE--QGLGGIVLKVE--- 191 (401)
Q Consensus 128 ~~~~~~~~vvv---~--~~DW~iIP--lENl---iA~~q~~~-~~l~a~v~~~~eA~~al~~LE--~G~DGVvl~~~--- 191 (401)
......|++.+ + |..-+.+| +|.| -+.....+ .-.+.+-.-.. .+.+-.+.+ .|+|+++.-+.
T Consensus 144 ~~l~~~D~vlvMsv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~-~~~~~~~~~~~aGad~~VvGSaIf~ 222 (237)
T 3cu2_A 144 PYLDQIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSMT-LELAKYFKQGTHQIDWLVSGSALFS 222 (237)
T ss_dssp TTTTTCSEEEEESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCC-HHHHHHHHHSSSCCCCEEECGGGGS
T ss_pred HHhhcCceeeeeeeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEEECCcC-HHHHHHHHHhCCCCcEEEEeeHHhC
Confidence 44556888877 2 23334454 4432 12211110 12333333322 344555678 89999998643
Q ss_pred -CHH-HHHHHHH
Q 015764 192 -DVK-AVLALKE 201 (401)
Q Consensus 192 -d~~-ev~~l~~ 201 (401)
|+. .+++|++
T Consensus 223 ~d~~~~~~~l~~ 234 (237)
T 3cu2_A 223 GELKTNLKVWKS 234 (237)
T ss_dssp SCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 663 3444443
No 161
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=51.18 E-value=16 Score=34.20 Aligned_cols=126 Identities=12% Similarity=0.182 Sum_probs=66.6
Q ss_pred hhHhHHHHHhCCcEEEEcCcch-hhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEE
Q 015764 60 KQVMTAAVERGWNTFVFLSENQ-QLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVI 138 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~~~-~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vvv 138 (401)
.+.+..+.+.|+|.+.|..+.- +..+.+. .+++.|.+.+..+.-.++ ++.+.......|+|++
T Consensus 99 ~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~--------------~ir~~G~k~Gvalnp~Tp--~e~l~~~l~~vD~Vlv 162 (246)
T 3inp_A 99 DALIESFAKAGATSIVFHPEASEHIDRSLQ--------------LIKSFGIQAGLALNPATG--IDCLKYVESNIDRVLI 162 (246)
T ss_dssp HHHHHHHHHHTCSEEEECGGGCSCHHHHHH--------------HHHTTTSEEEEEECTTCC--SGGGTTTGGGCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEccccchhHHHHHH--------------HHHHcCCeEEEEecCCCC--HHHHHHHHhcCCEEEE
Confidence 4578889999999999876521 1111111 123446776664333332 2344444445788876
Q ss_pred eC-----CCCeeee--hhhh---hhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEe-----cCCH-HHHHHHH
Q 015764 139 DL-----PDWQVIP--AENI---VASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLK-----VEDV-KAVLALK 200 (401)
Q Consensus 139 ~~-----~DW~iIP--lENl---iA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~-----~~d~-~ev~~l~ 200 (401)
-. .+-+.|| ++.| -+.+. +.+ -.+.+-.-.. .+.+-++.+.|+|.+|.- .+|+ +.+++++
T Consensus 163 MsV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~-~~I~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf~a~dp~~~i~~l~ 240 (246)
T 3inp_A 163 MSVNPGFGGQKFIPAMLDKAKEISKWISSTDRD-ILLEIDGGVN-PYNIAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMR 240 (246)
T ss_dssp ECSCTTC--CCCCTTHHHHHHHHHHHHHHHTSC-CEEEEESSCC-TTTHHHHHTTTCCEEEESHHHHTSSCHHHHHHHHH
T ss_pred eeecCCCCCcccchHHHHHHHHHHHHHHhcCCC-eeEEEECCcC-HHHHHHHHHcCCCEEEEehHHhCCCCHHHHHHHHH
Confidence 32 3444566 3332 11111 111 1233322222 245667899999999974 4677 4466666
Q ss_pred Hhh
Q 015764 201 EYF 203 (401)
Q Consensus 201 ~~~ 203 (401)
+.+
T Consensus 241 ~~i 243 (246)
T 3inp_A 241 DEL 243 (246)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 162
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=50.88 E-value=26 Score=25.97 Aligned_cols=39 Identities=13% Similarity=0.084 Sum_probs=28.9
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
...++.. .. .+......+++.|+++++.+|-+++++.+.
T Consensus 80 ~~~ii~~-~~-~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~ 118 (127)
T 2gkg_A 80 NVPIVII-GN-PDGFAQHRKLKAHADEYVAKPVDADQLVER 118 (127)
T ss_dssp TSCEEEE-EC-GGGHHHHHHSTTCCSEEEESSCCHHHHHHH
T ss_pred CCCEEEE-ec-CCchhHHHHHHhCcchheeCCCCHHHHHHH
Confidence 4566666 33 344566688999999999999999877543
No 163
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=50.84 E-value=74 Score=30.96 Aligned_cols=115 Identities=10% Similarity=0.100 Sum_probs=63.4
Q ss_pred CchhHhHHHHHhCCcEEEEcC--cchh-hHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCC
Q 015764 58 ESKQVMTAAVERGWNTFVFLS--ENQQ-LAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAE 134 (401)
Q Consensus 58 ~~K~~vt~AlEsG~~~~v~~~--~~~~-~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~ 134 (401)
+..+.+..++|.|+|.+.+.. .+.+ ..+.+..+... .+ +.++.. ..+.+.++.+.+.. ..+|
T Consensus 153 ~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~----------~~--~~pviv-~~v~~~~~a~~a~~--~Gad 217 (404)
T 1eep_A 153 DTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTK----------YP--NLDLIA-GNIVTKEAALDLIS--VGAD 217 (404)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH----------CT--TCEEEE-EEECSHHHHHHHHT--TTCS
T ss_pred hHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHH----------CC--CCeEEE-cCCCcHHHHHHHHh--cCCC
Confidence 346777889999999988632 2211 11111111110 00 222221 25778777555443 3589
Q ss_pred eEEEeC-----------CCCeeee----hhhhhhcccCCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 135 NIVIDL-----------PDWQVIP----AENIVASFQGSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 135 ~vvv~~-----------~DW~iIP----lENliA~~q~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
.+++.. .+|. .| +..+...+...+..|++ .+.+.+|+..++. .|+|+|.+-+.
T Consensus 218 ~I~vg~~~G~~~~~~~~~~~g-~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala---~GAd~V~iG~~ 287 (404)
T 1eep_A 218 CLKVGIGPGSICTTRIVAGVG-VPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIA---AGADSVMIGNL 287 (404)
T ss_dssp EEEECSSCSTTSHHHHHHCCC-CCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHH---HTCSEEEECHH
T ss_pred EEEECCCCCcCcCccccCCCC-cchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHH---cCCCHHhhCHH
Confidence 999821 2342 23 22333322334567887 6788888876654 59999998653
No 164
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=50.75 E-value=50 Score=32.90 Aligned_cols=114 Identities=15% Similarity=0.163 Sum_probs=65.4
Q ss_pred CchhHhHHHHHhCCcEEEEcCcc---hhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCC
Q 015764 58 ESKQVMTAAVERGWNTFVFLSEN---QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAE 134 (401)
Q Consensus 58 ~~K~~vt~AlEsG~~~~v~~~~~---~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~ 134 (401)
...+.+..+++.|++.+.+...+ ....+.+..+....| +.++. ...+.+.++...+.. ..+|
T Consensus 237 ~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p------------~~pvi-~g~~~t~e~a~~l~~--~G~d 301 (494)
T 1vrd_A 237 ETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYP------------DLPVV-AGNVATPEGTEALIK--AGAD 301 (494)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCT------------TSCEE-EEEECSHHHHHHHHH--TTCS
T ss_pred hHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCC------------CceEE-eCCcCCHHHHHHHHH--cCCC
Confidence 34678889999999998875432 111111111111000 12221 135778887655543 3588
Q ss_pred eEEEeC-----------CCCeeeeh----hhhhhcccCCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEec
Q 015764 135 NIVIDL-----------PDWQVIPA----ENIVASFQGSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKV 190 (401)
Q Consensus 135 ~vvv~~-----------~DW~iIPl----ENliA~~q~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~ 190 (401)
.+++.. .+|. +|. ..+.+.+...+..|++ .+.+.+|+..++ ..|+|+|.+-.
T Consensus 302 ~I~v~~~~G~~~~~~~~~~~g-~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kal---a~GAd~V~iGr 370 (494)
T 1vrd_A 302 AVKVGVGPGSICTTRVVAGVG-VPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKAL---AAGAESVMVGS 370 (494)
T ss_dssp EEEECSSCSTTCHHHHHHCCC-CCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHH---HTTCSEEEESH
T ss_pred EEEEcCCCCccccccccCCCC-ccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHH---HcCCCEEEECH
Confidence 888833 1232 332 2333333334567888 788888887665 46999999865
No 165
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=50.66 E-value=75 Score=23.89 Aligned_cols=80 Identities=11% Similarity=0.172 Sum_probs=45.2
Q ss_pred ecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHH
Q 015764 117 VSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVK 194 (401)
Q Consensus 117 v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ 194 (401)
..+.++.-..... ...+.++++..-.. ..--.++..+. .....++..... .+......+++.|+++.+.+|-+++
T Consensus 33 ~~~~~~~~~~~~~-~~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~~ii~~s~~-~~~~~~~~~~~~ga~~~l~Kp~~~~ 109 (126)
T 1dbw_A 33 HQSAEAFLAFAPD-VRNGVLVTDLRMPD-MSGVELLRNLGDLKINIPSIVITGH-GDVPMAVEAMKAGAVDFIEKPFEDT 109 (126)
T ss_dssp ESCHHHHHHHGGG-CCSEEEEEECCSTT-SCHHHHHHHHHHTTCCCCEEEEECT-TCHHHHHHHHHTTCSEEEESSCCHH
T ss_pred eCCHHHHHHHHhc-CCCCEEEEECCCCC-CCHHHHHHHHHhcCCCCCEEEEECC-CCHHHHHHHHHhCHHHheeCCCCHH
Confidence 4555543332222 24566777533211 12223343332 234456655544 3445677889999999999999998
Q ss_pred HHHHH
Q 015764 195 AVLAL 199 (401)
Q Consensus 195 ev~~l 199 (401)
++.+.
T Consensus 110 ~l~~~ 114 (126)
T 1dbw_A 110 VIIEA 114 (126)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77644
No 166
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=50.48 E-value=39 Score=25.20 Aligned_cols=81 Identities=10% Similarity=0.090 Sum_probs=44.4
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC-CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHH
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG-SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVK 194 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~-~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ 194 (401)
...+.++.-.... ....+.++++..-.. ..--.++..+.. ....++...... +......+++.|+++.+.+|-+++
T Consensus 32 ~~~~~~~a~~~~~-~~~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~ii~~s~~~-~~~~~~~~~~~g~~~~l~KP~~~~ 108 (123)
T 1xhf_A 32 EATDGAEMHQILS-EYDINLVIMDINLPG-KNGLLLARELREQANVALMFLTGRD-NEVDKILGLEIGADDYITKPFNPR 108 (123)
T ss_dssp EESSHHHHHHHHH-HSCCSEEEECSSCSS-SCHHHHHHHHHHHCCCEEEEEESCC-SHHHHHHHHHHTCSEEEESSCCHH
T ss_pred EeCCHHHHHHHHh-cCCCCEEEEcCCCCC-CCHHHHHHHHHhCCCCcEEEEECCC-ChHHHHHHHhcCcceEEeCCCCHH
Confidence 3555554333222 234677777432111 111223333321 245565554443 334567788999999999999998
Q ss_pred HHHHH
Q 015764 195 AVLAL 199 (401)
Q Consensus 195 ev~~l 199 (401)
++...
T Consensus 109 ~l~~~ 113 (123)
T 1xhf_A 109 ELTIR 113 (123)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77543
No 167
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=50.46 E-value=12 Score=34.04 Aligned_cols=60 Identities=18% Similarity=0.253 Sum_probs=39.6
Q ss_pred CCeEEEeCCCCeeeehhhhhhcccCCCceEEE-EcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHH
Q 015764 133 AENIVIDLPDWQVIPAENIVASFQGSGKTVFA-ISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKE 201 (401)
Q Consensus 133 ~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a-~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l~~ 201 (401)
.+.+-. +|..+. +.+|++++..+-++++ .+++.++++.+ ++.|+|||+ ||+|+.+.++.+
T Consensus 182 ~~~~~~---~~~~~~-~~~v~~~~~~G~~V~~WTvn~~~~~~~l---~~~GVDgIi--TD~P~~~~~~~~ 242 (250)
T 3ks6_A 182 IHEIGV---HIDTAD-AGLMAQVQAAGLDFGCWAAHTPSQITKA---LDLGVKVFT--TDRPTLAIALRT 242 (250)
T ss_dssp CCEEEE---EGGGCC-HHHHHHHHHTTCEEEEECCCSHHHHHHH---HHHTCSEEE--ESCHHHHHHHHH
T ss_pred CCEEec---chhhCC-HHHHHHHHHCCCEEEEEeCCCHHHHHHH---HHcCCCEEE--cCCHHHHHHHHH
Confidence 444444 344444 4567777766666655 56777776654 578999998 889998776554
No 168
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=50.45 E-value=41 Score=25.46 Aligned_cols=41 Identities=24% Similarity=0.314 Sum_probs=27.3
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecC-CHHHHHHHH
Q 015764 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE-DVKAVLALK 200 (401)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~-d~~ev~~l~ 200 (401)
...++...... +......+++.|+++++.+|- +++++.+.-
T Consensus 79 ~~~ii~~t~~~-~~~~~~~~~~~g~~~~l~KP~~~~~~l~~~i 120 (130)
T 3eod_A 79 QTPVLVISATE-NMADIAKALRLGVEDVLLKPVKDLNRLREMV 120 (130)
T ss_dssp CCCEEEEECCC-CHHHHHHHHHHCCSEEEESCC---CHHHHHH
T ss_pred CCCEEEEEcCC-CHHHHHHHHHcCCCEEEeCCCCcHHHHHHHH
Confidence 44566555543 344566788999999999998 787766443
No 169
>3e0e_A Replication protein A; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Methanococcus maripaludis} PDB: 2k5v_A
Probab=50.25 E-value=40 Score=26.81 Aligned_cols=71 Identities=15% Similarity=0.110 Sum_probs=41.1
Q ss_pred eeeeeeccCCCeEEEEcCCCCeeEEeeeeEEEeccceeEEEEEecCCCCeEEEEEeEecc-eEEEecCCCCCCCCCceee
Q 015764 291 TCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEAKTNSGDQTLYGIILQNAE-TVALVSPCKGTGEQEKAIP 369 (401)
Q Consensus 291 T~YLSEL~sG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLVeAe~~~~~G~~~sviLQnAE-TIRLv~p~~g~~~~g~~vs 369 (401)
+..+++|++|+.|- ++|||. +..|..-+.-+.. ..++..++.++|.- +||++-=+. ....
T Consensus 2 ~~kI~dl~~g~~v~-----------i~~~V~-~~~~~r~~~~~~G-~~~~v~~~~l~DeTG~I~~tlW~~-----~~~~- 62 (97)
T 3e0e_A 2 NYKISELMPNLSGT-----------INAEVV-TAYPKKEFSRKDG-TKGQLKSLFLKDDTGSIRGTLWNE-----LADF- 62 (97)
T ss_dssp EECGGGCCTTEEEE-----------EEEEEE-EECCCEEEC-----CCEEEEEEEEEETTEEEEEEEEGG-----GGGC-
T ss_pred CeEHHHCCCCCcEE-----------EEEEEE-ECCCceEEEcCCC-CeeEEEEEEEECCCCcEEEEEECC-----cccc-
Confidence 45689999985443 345553 4444333322211 12567788998864 688874441 1111
Q ss_pred eeecCCCCEEEEE
Q 015764 370 VTSLKVGDEVLLR 382 (401)
Q Consensus 370 Vt~LK~GD~VL~~ 382 (401)
+|+|||.|.+.
T Consensus 63 --~i~~Gdvv~i~ 73 (97)
T 3e0e_A 63 --EVKKGDIAEVS 73 (97)
T ss_dssp --CCCTTCEEEEE
T ss_pred --ccCCCCEEEEE
Confidence 89999999874
No 170
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=50.07 E-value=1e+02 Score=28.56 Aligned_cols=135 Identities=11% Similarity=0.020 Sum_probs=75.6
Q ss_pred CcEEEEEe--CchhHhHHHHHhCCcEEEEcCcch--h----hHhhccceeeeeeeeecCCcccc--CCCCeeEEEEEecC
Q 015764 50 PKRVWIWT--ESKQVMTAAVERGWNTFVFLSENQ--Q----LAIDWSTIALLDPLFIKEGEVYD--SGDRRVGSIIEVST 119 (401)
Q Consensus 50 ~K~vWiw~--~~K~~vt~AlEsG~~~~v~~~~~~--~----~~~~~~~i~~i~~l~~~~g~~~~--~~gk~v~~~~~v~~ 119 (401)
....|+|. .+.+.+..|+.+|+|.++++-||. + +......+.. . +.. ++ ..+..+.+ .|..
T Consensus 7 ~~rs~L~~p~~~~~~~~~a~~~gaD~vilDlEdav~~~~~~k~~Ar~~v~~--~--l~~---~~~~~~~~~~~V--Rv~~ 77 (284)
T 1sgj_A 7 LLRSVLFAPGNRADLIAKLPRSAPDAVVIDLEDAVPGTAEAKAAARPVAHD--A--ARD---LIAAAPHLAVFV--RVNA 77 (284)
T ss_dssp CCSEEEEEETTCHHHHHHTTTTCCSEEEEESSTTSCSSHHHHHHHHHHHHH--H--HHH---HHHHSTTSEEEE--ECCC
T ss_pred CCceEEEccCCCHHHHHHHHhCCCCEEEEECCCCCCCchhhHHHHHHHHHH--H--HHh---cccccCCCeEEE--EeCC
Confidence 34567776 688999999999999999997652 1 1111111100 0 000 01 12334333 4543
Q ss_pred ---hhhhhhhccccCCCCeEEEeCCC--CeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhc-ccCeEEEecCCH
Q 015764 120 ---PQELQQLQPADGQAENIVIDLPD--WQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQ-GLGGIVLKVEDV 193 (401)
Q Consensus 120 ---~e~~e~~~~~~~~~~~vvv~~~D--W~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~-G~DGVvl~~~d~ 193 (401)
+...+.+...+...+.+++-.-. .++--+..++... +....+++.+.+++-...+-+++.. |+||+.+-+.|.
T Consensus 78 ~~~~~~~~dl~~~l~g~~~i~lPkv~s~~~v~~~~~~l~~~-g~~~~i~~~IEt~~av~~~~eIa~~~~vd~l~iG~~DL 156 (284)
T 1sgj_A 78 LHSPYFEDDLSVLTPELSGVVVPKLEMGAEARQVAQMLQER-SLPLPILAGLETGAGVWNAREIMEVPEVAWAYFGAEDY 156 (284)
T ss_dssp TTSTTHHHHGGGCCTTSSEEEECSCCSHHHHHHHHHHHHHT-TCCCCEEEEECSHHHHHTHHHHHTSTTEEEEEECHHHH
T ss_pred CCCHhHHHHHHHHhccCCEEEeCCCCCHHHHHHHHHHHHhc-CCCeEEEEEecCHHHHHHHHHHHcCCCCcEEEECHHHH
Confidence 44222332222245666662211 1111122223222 2356799999999988888888853 899999999876
Q ss_pred H
Q 015764 194 K 194 (401)
Q Consensus 194 ~ 194 (401)
.
T Consensus 157 ~ 157 (284)
T 1sgj_A 157 T 157 (284)
T ss_dssp H
T ss_pred H
Confidence 5
No 171
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=50.01 E-value=25 Score=34.84 Aligned_cols=119 Identities=17% Similarity=0.144 Sum_probs=64.7
Q ss_pred CchhHhHHHHHhCCcEEEEcCcchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEE
Q 015764 58 ESKQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIV 137 (401)
Q Consensus 58 ~~K~~vt~AlEsG~~~~v~~~~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vv 137 (401)
..++.+..+++.|+|.+++.....+...-|..+..+.- .++ +.++. -..+.+.++...+.. ..++.+.
T Consensus 233 ~~~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~-------~~p--~~pvi-~G~v~t~~~a~~~~~--~Gad~I~ 300 (491)
T 1zfj_A 233 DTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRA-------HFP--NRTLI-AGNIATAEGARALYD--AGVDVVK 300 (491)
T ss_dssp THHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHH-------HCS--SSCEE-EEEECSHHHHHHHHH--TTCSEEE
T ss_pred hHHHHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHH-------HCC--CCcEe-CCCccCHHHHHHHHH--cCCCEEE
Confidence 35788899999999999987521111111111111110 000 11121 335677776554433 3577777
Q ss_pred EeC-----------CCCeeeehh---hhhhcccCCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 138 IDL-----------PDWQVIPAE---NIVASFQGSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 138 v~~-----------~DW~iIPlE---NliA~~q~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
+.. .+|..-.++ .+.++.+..+..|++ .+.+.+|+..++ +.|+|+|++-+-
T Consensus 301 vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal---~~GA~~v~vG~~ 367 (491)
T 1zfj_A 301 VGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKAL---AAGGNAVMLGSM 367 (491)
T ss_dssp ECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHH---HTTCSEEEESTT
T ss_pred ECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHH---HcCCcceeeCHH
Confidence 731 245432233 333322234567887 678999887766 469999998553
No 172
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A*
Probab=49.42 E-value=26 Score=33.54 Aligned_cols=105 Identities=23% Similarity=0.319 Sum_probs=58.9
Q ss_pred eeeEEEEEEEEEcCCcceE--EEeecC---------CCCCCceEEEeccCceEEEEeeccccCCCCCCCCeeee----cC
Q 015764 214 SLMKATVTRVDVAGMGDRV--CVDLCS---------LMRPGEGLLVGSFARGLFLVHSECLESNYIASRPFRVN----AG 278 (401)
Q Consensus 214 ~L~~atVt~V~~vGmGDRV--CVDtcs---------ll~~GEGmLVGS~s~glFLVhsEt~es~Yva~RPFRVN----AG 278 (401)
...+++|++++.+. .|-. .+.... -+.||+=+-|- +........|.-.|||-+- .|
T Consensus 148 ~~~~~~V~~~~~~s-~~i~~~~l~~~~~~~~~l~~~~~~pGQ~v~l~--------~~~~~~~~~~~~~R~ySi~s~p~~~ 218 (399)
T 4g1v_A 148 GWKPFEITAKEYVA-SDIVEFTVKPKFGSGIELESLPITPGQYITVN--------THPIRQENQYDALRHYSLCSASTKN 218 (399)
T ss_dssp SCEEEEEEEEEEEE-TTEEEEEEEECTTSCCCGGGCCCCTTCEEEEE--------ECCCSTTCCSCEEEEEEBSCSCCTT
T ss_pred cceEEEEEEEEEcC-CCeEEEEEEcCCCCcCCcCCCCCCCCCEEEEE--------EeCCCCCCccceeeeecccCCCCCC
Confidence 56788999998885 2332 232211 24555533322 1001001123344555553 24
Q ss_pred CceeEEEe-------cCC-ceeee-eeccCCCeEEEEcCCCCeeEEeeeeEEE-----eccceeEEEEE
Q 015764 279 PVHAYVLV-------PGG-KTCYL-SELKSGKEVIVVDQKGRQRTAVVGRVKI-----ESRPLILVEAK 333 (401)
Q Consensus 279 aVHaYv~~-------pgg-kT~YL-SEL~sG~eVLvVd~~G~tR~~~VGRvKI-----E~RPLlLVeAe 333 (401)
.+.=.|.. |+| -|+|| ..++.||+|.+-...|.-. ..- ..+|++||=+-
T Consensus 219 ~~~i~Vk~~~~~~~~~~G~~S~~L~~~l~~Gd~v~v~gP~G~f~------l~~~~~~~~~~~~vlIagG 281 (399)
T 4g1v_A 219 GLRFAVKMEAARENFPAGLVSEYLHKDAKVGDEIKLSAPAGDFA------INKELIHQNEVPLVLLSSG 281 (399)
T ss_dssp CEEEEEECCCCBTTBCCCHHHHHHHHTCCTTCEEEEEEEECSCC------CCTTTTTCSSSCEEEEEEG
T ss_pred eEEEEEEeccCCCCCCCCEehhHHHhCCCCCCEEEEEeccccee------eCcccccCCCCCEEEEecc
Confidence 45555665 555 69999 5999999999987777632 111 25789888653
No 173
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=49.15 E-value=32 Score=27.03 Aligned_cols=82 Identities=20% Similarity=0.248 Sum_probs=43.5
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC--CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG--SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~--~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (401)
...+.++.-.........+.+|++..-.. ..--.++..+.. ....++..... .+......+++.|+++++.+|-++
T Consensus 34 ~~~~~~~a~~~l~~~~~~dlvi~d~~l~~-~~g~~~~~~l~~~~~~~~ii~ls~~-~~~~~~~~~~~~g~~~~l~kp~~~ 111 (154)
T 2qsj_A 34 GAETVSDALAFLEADNTVDLILLDVNLPD-AEAIDGLVRLKRFDPSNAVALISGE-TDHELIRAALEAGADGFIPKSADP 111 (154)
T ss_dssp EESSHHHHHHHHHTTCCCSEEEECC-------CHHHHHHHHHHCTTSEEEEC------CHHHHHHHHTTCCBBCCTTSCH
T ss_pred EecCHHHHHHHHhccCCCCEEEEeCCCCC-CchHHHHHHHHHhCCCCeEEEEeCC-CCHHHHHHHHHccCCEEEeCCCCH
Confidence 35565554333322134677777432111 111223333322 24566655444 445677889999999999999999
Q ss_pred HHHHHH
Q 015764 194 KAVLAL 199 (401)
Q Consensus 194 ~ev~~l 199 (401)
+++.+.
T Consensus 112 ~~L~~~ 117 (154)
T 2qsj_A 112 QVLIHA 117 (154)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887644
No 174
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=48.84 E-value=18 Score=33.16 Aligned_cols=31 Identities=13% Similarity=0.303 Sum_probs=26.2
Q ss_pred CCcEEEEEe-CchhHhHHHHHhCCcEEEEcCc
Q 015764 49 KPKRVWIWT-ESKQVMTAAVERGWNTFVFLSE 79 (401)
Q Consensus 49 ~~K~vWiw~-~~K~~vt~AlEsG~~~~v~~~~ 79 (401)
..|.|++|| .+++.|...++.|+|+|+.+..
T Consensus 223 lg~~V~~WTvn~~~~~~~l~~~GVDgIiTD~P 254 (285)
T 1xx1_A 223 FINKIYYWSVDKVSTTKAALDVGVDGIMTNYP 254 (285)
T ss_dssp CCCEEEEECCCSHHHHHHHHHHTCSEEEESCH
T ss_pred CCCeEEEeeCCCHHHHHHHHhcCCCEEEeCCH
Confidence 345899999 6789999999999999998653
No 175
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=48.52 E-value=17 Score=26.93 Aligned_cols=66 Identities=17% Similarity=0.156 Sum_probs=38.3
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC-CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 132 QAENIVIDLPDWQVIPAENIVASFQG-SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~-~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
..+.++++..-.. ..--.++..+.. ....++......+ ......+++.|+++.+.+|-+++++.+.
T Consensus 45 ~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~ii~~s~~~~-~~~~~~~~~~g~~~~l~Kp~~~~~l~~~ 111 (121)
T 1zh2_A 45 KPDLIILDLGLPD-GDGIEFIRDLRQWSAVPVIVLSARSE-ESDKIAALDAGADDYLSKPFGIGELQAR 111 (121)
T ss_dssp CCSEEEEESEETT-EEHHHHHHHHHTTCCCCEEEEESCCS-HHHHHHHHHHTCSEEEESSCCHHHHHHH
T ss_pred CCCEEEEeCCCCC-CcHHHHHHHHHhCCCCcEEEEECCCC-HHHHHHHHhcCCCeEEeCCcCHHHHHHH
Confidence 4566777432111 111233443332 2345555544433 3456678899999999999999887643
No 176
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=48.27 E-value=67 Score=28.48 Aligned_cols=111 Identities=20% Similarity=0.158 Sum_probs=59.1
Q ss_pred eeeEEEEEEEEEcCCcc-eEEEeecC-----CCCCCceEEEeccCceEEEEeeccccCCCC-CCCCeeeecCCceeEEEe
Q 015764 214 SLMKATVTRVDVAGMGD-RVCVDLCS-----LMRPGEGLLVGSFARGLFLVHSECLESNYI-ASRPFRVNAGPVHAYVLV 286 (401)
Q Consensus 214 ~L~~atVt~V~~vGmGD-RVCVDtcs-----ll~~GEGmLVGS~s~glFLVhsEt~es~Yv-a~RPFRVNAGaVHaYv~~ 286 (401)
...+++|++++.+.-.= ++.+..-. -+.||+=+.|--...+ +....||. ++-|= +.|-++=.|..
T Consensus 11 ~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~pGQ~v~l~~~~~g------~~~~R~ySi~s~~~--~~~~~~l~vk~ 82 (270)
T 2cnd_A 11 GRIHCRLVAKKELSRDVRLFRFSLPSPDQVLGLPIGKHIFVCATIEG------KLCMRAYTPTSMVD--EIGHFDLLVKV 82 (270)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEECSSTTCCCCCCTTCEEEEEEEETT------EEEEEEECCCSCTT--CCSEEEEEEEC
T ss_pred ceEEEEEEEEEEeCCCeEEEEEECCCCccccCCCCCCEEEEEeeeCC------cEEEEeeccCCCcc--CCCEEEEEEEE
Confidence 34678999998886542 34444322 2466664433111111 11223442 11121 13445555554
Q ss_pred ----------c-CCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEE-----eccceeEEEE
Q 015764 287 ----------P-GGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKI-----ESRPLILVEA 332 (401)
Q Consensus 287 ----------p-ggkT~YLSEL~sG~eVLvVd~~G~tR~~~VGRvKI-----E~RPLlLVeA 332 (401)
+ |.-|+||+.|+.||+|.+-...|+.....-|.-.+ ..+|++||=+
T Consensus 83 ~~~~~~~~~~~~G~~s~~l~~l~~Gd~v~v~gP~G~~~~~~~g~f~l~~~~~~~~~~vliag 144 (270)
T 2cnd_A 83 YFKNEHPKFPNGGLMTQYLDSLPVGSYIDVKGPLGHVEYTGRGSFVINGKQRNARRLAMICG 144 (270)
T ss_dssp CCSSCBTTBTTCCHHHHHHHHCCTTCEEEEEEEECSEECCSSSCEEETTEEECCSEEEEEEE
T ss_pred eccCcccccCCCCchhhHHhcCCCCCEEEEECCcccceeccccceeccCCcccCCEEEEEec
Confidence 2 44799999999999999988877621100011222 2578888755
No 177
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=47.79 E-value=41 Score=31.24 Aligned_cols=98 Identities=17% Similarity=0.233 Sum_probs=56.9
Q ss_pred eeEEEEEEEEEcCCcc-eEEEeecC-----CCCCCceEEEeccCceEEEEeeccccCCCCCCCCeeee----cCCceeEE
Q 015764 215 LMKATVTRVDVAGMGD-RVCVDLCS-----LMRPGEGLLVGSFARGLFLVHSECLESNYIASRPFRVN----AGPVHAYV 284 (401)
Q Consensus 215 L~~atVt~V~~vGmGD-RVCVDtcs-----ll~~GEGmLVGS~s~glFLVhsEt~es~Yva~RPFRVN----AGaVHaYv 284 (401)
-.+++|++++.+.-.- ++.+..-. -+.||+=+.+- ... . -..|||-+- .|-+.=.+
T Consensus 108 ~~~~~V~~~~~~~~~~~~l~l~~~~~~~~~~~~pGQ~v~l~---------~~~----~-~~~R~ySi~s~~~~~~l~~~v 173 (338)
T 1krh_A 108 HFEGTLARVENLSDSTITFDIQLDDGQPDIHFLAGQYVNVT---------LPG----T-TETRSYSFSSQPGNRLTGFVV 173 (338)
T ss_dssp EEEEEEEEEEESSSSEEEEEEEECTTCCCCCCCTTCEEEEE---------CTT----S-SCEEEEECCSCTTCSEEEEEE
T ss_pred EEEEEEEEEEEcCCCEEEEEEEeCCCCCCCCcCCCCeEEEE---------cCC----C-CccccccccCCCCCCeEEEEE
Confidence 3578899998886532 33444322 24555533321 111 0 123555442 34344445
Q ss_pred Ee-cCC-ceeee-eeccCCCeEEEEcCCCCeeEEeeeeEEEeccceeEEEE
Q 015764 285 LV-PGG-KTCYL-SELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEA 332 (401)
Q Consensus 285 ~~-pgg-kT~YL-SEL~sG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLVeA 332 (401)
.. |+| -|+|| +.|+.||+|.+-...|+... .-..+|++||=+
T Consensus 174 k~~~~G~~S~~L~~~l~~Gd~v~v~gP~G~f~~------~~~~~~~vliag 218 (338)
T 1krh_A 174 RNVPQGKMSEYLSVQAKAGDKMSFTGPFGSFYL------RDVKRPVLMLAG 218 (338)
T ss_dssp ECCTTCHHHHHHHTTCCTTCEEEEEEEECSCSC------CCCSSCEEEEEE
T ss_pred EEcCCCCchhhHhhccCCCCEEEEECCccceEe------CCCCceEEEEEc
Confidence 44 544 59999 69999999999888887532 122488888855
No 178
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A*
Probab=47.67 E-value=48 Score=30.52 Aligned_cols=103 Identities=17% Similarity=0.176 Sum_probs=57.3
Q ss_pred eEEEEEEEEEcCC----cc--eEEEeecC--CCCCCceEEEeccCceEEEEeeccc--cCCCCCCCCeeeecCC------
Q 015764 216 MKATVTRVDVAGM----GD--RVCVDLCS--LMRPGEGLLVGSFARGLFLVHSECL--ESNYIASRPFRVNAGP------ 279 (401)
Q Consensus 216 ~~atVt~V~~vGm----GD--RVCVDtcs--ll~~GEGmLVGS~s~glFLVhsEt~--es~Yva~RPFRVNAGa------ 279 (401)
..++|++++.+.- +| ++.++.-. -+.||+=+- ++-... .......|||-+---|
T Consensus 38 ~~~~V~~~~~lt~~~~~~~v~~l~l~~~~~~~~~pGQ~v~----------l~~~~~~~~g~~~~~R~ySi~s~p~~~~~~ 107 (314)
T 1fnb_A 38 YVGRCLLNTKITGDDAPGETWHMVFSHEGEIPYREGQSVG----------VIPDGEDKNGKPHKLRLYSIASSALGDFGD 107 (314)
T ss_dssp EEEEEEEEEECSCSSSSSCEEEEEEECTTCCCCCTTCEEE----------EECSSBCTTSSBCCCEEEECCSCSSCTTSS
T ss_pred EEEEEEEEEEecCCCCCCcEEEEEEecCCCCCcCCCCEEE----------EecCCCCcCCCcCCceeEecCCCCcccCCC
Confidence 5689999999975 34 44454322 134444222 222111 0112346777764332
Q ss_pred ---ceeEEEe----------cCC-ceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEEeccceeEEEE
Q 015764 280 ---VHAYVLV----------PGG-KTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEA 332 (401)
Q Consensus 280 ---VHaYv~~----------pgg-kT~YLSEL~sG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLVeA 332 (401)
++=.|.. ++| -|+||++|+.||.|.+-...|+.-... .-..+|++||=+
T Consensus 108 ~~~~~l~Vk~~~y~~~~g~~~~G~~S~~L~~l~~Gd~v~v~gP~G~~~~~~----~~~~~~~vlIag 170 (314)
T 1fnb_A 108 AKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGAEVKLTGPVGKEMLMP----KDPNATIIMLGT 170 (314)
T ss_dssp SCEEEEEEECCEEECTTSCEEECHHHHHHHHCCTTCEEEEEEEECSTTCCB----SCTTCEEEEEEE
T ss_pred CCEEEEEEEEEEeccCCCCcCCCchhhHhhcCCCCCEEEEEeccCCceeCC----CCCCCCEEEEeC
Confidence 3322332 444 499999999999999987777542110 012578888754
No 179
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=47.55 E-value=51 Score=28.61 Aligned_cols=49 Identities=27% Similarity=0.209 Sum_probs=29.5
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEE
Q 015764 132 QAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVL 188 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl 188 (401)
.++.+.+...+. +++.+...+. . ..+-..+.+.+|++. +.+.|+|.|++
T Consensus 94 gad~v~l~~~~~---~~~~~~~~~g-~-~~~~~s~~t~~e~~~---a~~~g~d~v~~ 142 (227)
T 2tps_A 94 KADGIHIGQEDA---NAKEVRAAIG-D-MILGVSAHTMSEVKQ---AEEDGADYVGL 142 (227)
T ss_dssp TCSEEEECTTSS---CHHHHHHHHT-T-SEEEEEECSHHHHHH---HHHHTCSEEEE
T ss_pred CCCEEEECCCcc---CHHHHHHhcC-C-cEEEEecCCHHHHHH---HHhCCCCEEEE
Confidence 467888754443 3444443332 2 233334688888654 55789999996
No 180
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=47.55 E-value=23 Score=31.24 Aligned_cols=104 Identities=15% Similarity=0.052 Sum_probs=56.7
Q ss_pred eeeeeeecCCccccC-CCCeeEEEEEecChhhhhhhccccCCCCeEEEeCCCC---eeeehhhhhhcccC-CCceEEE--
Q 015764 92 LLDPLFIKEGEVYDS-GDRRVGSIIEVSTPQELQQLQPADGQAENIVIDLPDW---QVIPAENIVASFQG-SGKTVFA-- 164 (401)
Q Consensus 92 ~i~~l~~~~g~~~~~-~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vvv~~~DW---~iIPlENliA~~q~-~~~~l~a-- 164 (401)
.|..|.+.+|..+.. +|+. ..+-...++.++.+.... ..++++-+...|. ..++. .+|.++.. .+..++.
T Consensus 5 iip~id~~~g~~V~~~~g~~-~~~~~~~d~~~~a~~~~~-~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~ipv~v~g 81 (244)
T 2y88_A 5 LLPAVNVVEGRAVRLVQGKA-GSQTEYGSAVDAALGWQR-DGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKLDVQVELSG 81 (244)
T ss_dssp EEEEEEEETTEEEEEETTEE-EEEEEEEEHHHHHHHHHH-TTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHCSSEEEEES
T ss_pred EEEEEEeECCEEEEeecccc-ccceecCCHHHHHHHHHH-cCCCEEEEEcCcccccCCChH-HHHHHHHHhcCCcEEEEC
Confidence 355577788877753 3322 222223355544443332 3578888865432 22344 55555432 2334444
Q ss_pred EcCCHHHHHHHHHHhhcccCeEEEecC---CHHHHHHHHH
Q 015764 165 ISKTPSEAQIFLEALEQGLGGIVLKVE---DVKAVLALKE 201 (401)
Q Consensus 165 ~v~~~~eA~~al~~LE~G~DGVvl~~~---d~~ev~~l~~ 201 (401)
-+.++++++.+ ++.|+|+|++.+. +|..+.++.+
T Consensus 82 gi~~~~~~~~~---l~~Gad~V~lg~~~l~~p~~~~~~~~ 118 (244)
T 2y88_A 82 GIRDDESLAAA---LATGCARVNVGTAALENPQWCARVIG 118 (244)
T ss_dssp SCCSHHHHHHH---HHTTCSEEEECHHHHHCHHHHHHHHH
T ss_pred CCCCHHHHHHH---HHcCCCEEEECchHhhChHHHHHHHH
Confidence 35677775555 5579999999985 4444544443
No 181
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=47.50 E-value=36 Score=32.62 Aligned_cols=41 Identities=20% Similarity=0.067 Sum_probs=34.5
Q ss_pred ceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHHhh
Q 015764 160 KTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYF 203 (401)
Q Consensus 160 ~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l~~~~ 203 (401)
.+|..++.|.+||+.+ ++.|+|.|+|.+=++.++++..+.+
T Consensus 197 ~~IgVev~t~eea~eA---~~aGaD~I~ld~~~~~~~k~av~~v 237 (286)
T 1x1o_A 197 LKVEVEVRSLEELEEA---LEAGADLILLDNFPLEALREAVRRV 237 (286)
T ss_dssp SCEEEEESSHHHHHHH---HHHTCSEEEEESCCHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHH---HHcCCCEEEECCCCHHHHHHHHHHh
Confidence 4788999999998765 4679999999999999988776655
No 182
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=47.42 E-value=32 Score=26.42 Aligned_cols=40 Identities=15% Similarity=0.050 Sum_probs=29.0
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
...++...... +......+++.|+++++.+|-+++++...
T Consensus 87 ~~~ii~~s~~~-~~~~~~~~~~~g~~~~l~KP~~~~~L~~~ 126 (135)
T 3snk_A 87 TVPLIAVSDEL-TSEQTRVLVRMNASDWLHKPLDGKELLNA 126 (135)
T ss_dssp TCCEEEEESCC-CHHHHHHHHHTTCSEEEESSCCHHHHHHH
T ss_pred CCcEEEEeCCC-CHHHHHHHHHcCcHhhccCCCCHHHHHHH
Confidence 34566555443 34456778999999999999999877643
No 183
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=47.32 E-value=23 Score=31.51 Aligned_cols=36 Identities=11% Similarity=0.155 Sum_probs=28.8
Q ss_pred CCCcEEEEEe-CchhHhHHHHHhCCcEEEEcCcchhhHh
Q 015764 48 SKPKRVWIWT-ESKQVMTAAVERGWNTFVFLSENQQLAI 85 (401)
Q Consensus 48 ~~~K~vWiw~-~~K~~vt~AlEsG~~~~v~~~~~~~~~~ 85 (401)
.+.+.||+|| .+++.+...++.|+|+|+.+. .+.+.
T Consensus 184 ~~G~~v~~wtvn~~~~~~~l~~~GvdgI~TD~--p~~~~ 220 (224)
T 1vd6_A 184 KRGLFVVAWTVNEEGEARRLLALGLDGLIGDR--PEVLL 220 (224)
T ss_dssp HTTCEEEEECCCCHHHHHHHHHTTCSEEEESC--HHHHT
T ss_pred HCCCEEEEEeCCCHHHHHHHHhcCCCEEEcCC--HHHHH
Confidence 4567899999 688999999999999999755 44443
No 184
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=46.80 E-value=18 Score=27.48 Aligned_cols=38 Identities=18% Similarity=0.158 Sum_probs=26.3
Q ss_pred ceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHH
Q 015764 160 KTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLA 198 (401)
Q Consensus 160 ~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~ 198 (401)
..++...... +......+++.|+++.+.+|-+++++.+
T Consensus 74 ~~ii~~t~~~-~~~~~~~~~~~ga~~~l~KP~~~~~l~~ 111 (120)
T 3f6p_A 74 MPIIMLTAKD-SEIDKVIGLEIGADDYVTKPFSTRELLA 111 (120)
T ss_dssp SCEEEEEESS-CHHHHHHHHHTTCCEEEEESCCHHHHHH
T ss_pred CCEEEEECCC-ChHHHHHHHhCCcceeEcCCCCHHHHHH
Confidence 4455444333 2334557889999999999999987753
No 185
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=46.64 E-value=44 Score=31.79 Aligned_cols=108 Identities=10% Similarity=0.096 Sum_probs=62.1
Q ss_pred chhHhHHHHHhCCcEEEEcCcc-hhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEE
Q 015764 59 SKQVMTAAVERGWNTFVFLSEN-QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIV 137 (401)
Q Consensus 59 ~K~~vt~AlEsG~~~~v~~~~~-~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vv 137 (401)
..+.+..+++.|++.+.+..++ .+..+.+.. .|.++ +..+.+.++...+.. ..+|.++
T Consensus 91 ~~~~~~~~~~~g~d~V~l~~g~p~~~~~~l~~-----------------~g~~v--~~~v~s~~~a~~a~~--~GaD~i~ 149 (326)
T 3bo9_A 91 ADDLVKVCIEEKVPVVTFGAGNPTKYIRELKE-----------------NGTKV--IPVVASDSLARMVER--AGADAVI 149 (326)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCCHHHHHHHHH-----------------TTCEE--EEEESSHHHHHHHHH--TTCSCEE
T ss_pred HHHHHHHHHHCCCCEEEECCCCcHHHHHHHHH-----------------cCCcE--EEEcCCHHHHHHHHH--cCCCEEE
Confidence 3688999999999998886543 233322221 13333 346788887655443 3589999
Q ss_pred EeCC--CCe--eeehhhhhhcccC-CCceEEE--EcCCHHHHHHHHHHhhcccCeEEEec
Q 015764 138 IDLP--DWQ--VIPAENIVASFQG-SGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKV 190 (401)
Q Consensus 138 v~~~--DW~--iIPlENliA~~q~-~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~ 190 (401)
++.. +.. -+|--+++.++.. .+..|++ .+.|.+++..++ +.|+|||.+-+
T Consensus 150 v~g~~~GG~~G~~~~~~ll~~i~~~~~iPviaaGGI~~~~dv~~al---~~GA~gV~vGs 206 (326)
T 3bo9_A 150 AEGMESGGHIGEVTTFVLVNKVSRSVNIPVIAAGGIADGRGMAAAF---ALGAEAVQMGT 206 (326)
T ss_dssp EECTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHH---HHTCSEEEESH
T ss_pred EECCCCCccCCCccHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHH---HhCCCEEEech
Confidence 9652 111 1122233333211 1334554 366777776555 46999999864
No 186
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=46.47 E-value=53 Score=31.82 Aligned_cols=96 Identities=17% Similarity=0.255 Sum_probs=64.9
Q ss_pred cCCCCeeEEEEEecChhhhhhhccccCCCCeE--------EEeCCCCeeeehhh-----hhhcccC-CCceEEEEcCCH-
Q 015764 105 DSGDRRVGSIIEVSTPQELQQLQPADGQAENI--------VIDLPDWQVIPAEN-----IVASFQG-SGKTVFAISKTP- 169 (401)
Q Consensus 105 ~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~v--------vv~~~DW~iIPlEN-----liA~~q~-~~~~l~a~v~~~- 169 (401)
..+|.++..+..+.++++.+.+... .+|.| +++..+ .|-|. +...++. .+..++..+.|.
T Consensus 14 t~dg~~~~l~~n~~~p~~~~~a~~~--GadgVGL~RtE~l~ld~e~---~p~~~~q~~~~~~~~~~~~~~~v~VR~~d~g 88 (324)
T 2xz9_A 14 TPDGKKVMLAANIGTPKDVASALAN--GAEGVGLFRTEFLYMDRNS---LPSEEEQFEAYKEVVEKMGGRPVTIRTLDIG 88 (324)
T ss_dssp CTTSCEEEEEEEESSGGGHHHHHHT--TCSSEEEECCGGGTSSSSS---CCCHHHHHHHHHHHHHHTTTSCEEEECCCCB
T ss_pred ccCCCEEEEEEECCCHHHHHHHHhC--CCCeEeehhhhhhhccCCC---CCCHHHHHHHHHHHHHHhCCCceEEEeCCCC
Confidence 4568889999999999998776643 35544 554444 55543 3322221 233577777663
Q ss_pred ----------------------------------HHHHHHHHHhhcccCeEEEe-cCCHHHHHHHHHhhcc
Q 015764 170 ----------------------------------SEAQIFLEALEQGLGGIVLK-VEDVKAVLALKEYFDG 205 (401)
Q Consensus 170 ----------------------------------~eA~~al~~LE~G~DGVvl~-~~d~~ev~~l~~~~~~ 205 (401)
.|.+..+.++..|.+||+++ .++++|+++++++++.
T Consensus 89 ~dk~~~~~~~~~E~nP~LG~RgiR~~l~~p~~~~~ql~Ai~ra~~~G~~~ImvPmV~s~~E~~~a~~~v~~ 159 (324)
T 2xz9_A 89 GDKELPYLDMPKEMNPFLGYRAIRLCLDRPDIFKTQLRAILRASAYGNVQIMYPMISSVEEVRKANSILEE 159 (324)
T ss_dssp GGGCCTTTCCCCCSCGGGSSBTHHHHHHCHHHHHHHHHHHHHHGGGSCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred cchhhhhhccccccCcccccceeeeeccchhhHHHHHHHHHHHHhCCCCEEEEcCCCCHHHHHHHHHHHHH
Confidence 24467888999999999885 4678998888887754
No 187
>2hbw_A NLP/P60 protein; NLP/P60 family protein, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; HET: UNL; 1.05A {Anabaena variabilis} PDB: 2evr_A 2fg0_A
Probab=46.43 E-value=10 Score=35.37 Aligned_cols=41 Identities=17% Similarity=0.209 Sum_probs=26.9
Q ss_pred cCCCCCCCCeeeecCCceeEEEecCCceeeeeeccCCCeEEEEc
Q 015764 264 ESNYIASRPFRVNAGPVHAYVLVPGGKTCYLSELKSGKEVIVVD 307 (401)
Q Consensus 264 es~Yva~RPFRVNAGaVHaYv~~pggkT~YLSEL~sG~eVLvVd 307 (401)
+..|++..+|+|++. +.-|-. | ....-.+++..|+.|.|.+
T Consensus 9 ~~~~~~~~~~~v~~~-~~l~~~-p-~~~~~~tq~l~Ge~~~Vl~ 49 (235)
T 2hbw_A 9 SIQSPKSGEYQCLAA-LNLYDS-P-ECTSLATQAAVGRHLQVTS 49 (235)
T ss_dssp -------CEEEESSC-EEEESS-T-TCCSEEEEECTTCEEEEEE
T ss_pred cccccCCeeEEEecC-cccccC-C-CCccceeeecCCCEEEEEE
Confidence 356899999999996 777755 5 3455679999999999983
No 188
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=46.37 E-value=1.4e+02 Score=27.88 Aligned_cols=127 Identities=13% Similarity=0.154 Sum_probs=72.5
Q ss_pred eeeeeEEEEEEEEEcCCcce---EEEeecCCCCCCceEEEeccCce-EEEEeeccccCCCCCCCCeeeecCCceeEEEec
Q 015764 212 LLSLMKATVTRVDVAGMGDR---VCVDLCSLMRPGEGLLVGSFARG-LFLVHSECLESNYIASRPFRVNAGPVHAYVLVP 287 (401)
Q Consensus 212 ~l~L~~atVt~V~~vGmGDR---VCVDtcsll~~GEGmLVGS~s~g-lFLVhsEt~es~Yva~RPFRVNAGaVHaYv~~p 287 (401)
.+++...+|.+-.+++-+.. +++| |.=+.+.+.-.+ .|.+..+|.+- ++ ++..|..+.+-+.|
T Consensus 48 ~iD~~tg~v~~~i~l~~~~fgeGi~~~-------g~~lyv~t~~~~~v~viD~~t~~v--~~----~i~~g~~~g~glt~ 114 (266)
T 2iwa_A 48 QVALQTGKVENIHKMDDSYFGEGLTLL-------NEKLYQVVWLKNIGFIYDRRTLSN--IK----NFTHQMKDGWGLAT 114 (266)
T ss_dssp EEETTTCCEEEEEECCTTCCEEEEEEE-------TTEEEEEETTCSEEEEEETTTTEE--EE----EEECCSSSCCEEEE
T ss_pred EEECCCCCEEEEEecCCCcceEEEEEe-------CCEEEEEEecCCEEEEEECCCCcE--EE----EEECCCCCeEEEEE
Confidence 34555555666555543222 3333 223555554433 44444454321 11 23344234577889
Q ss_pred CCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEEec--cce-eEEEEEecCCCCeEEEEEeEecceEEEecCCC
Q 015764 288 GGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIES--RPL-ILVEAKTNSGDQTLYGIILQNAETVALVSPCK 359 (401)
Q Consensus 288 ggkT~YLSEL~sG~eVLvVd~~G~tR~~~VGRvKIE~--RPL-lLVeAe~~~~~G~~~sviLQnAETIRLv~p~~ 359 (401)
+|+.-|.|+ . .+.|.++|.+... .++++++-. ||+ .+=|.+.. +|+.+ +=.....+|..+.+..
T Consensus 115 Dg~~l~vs~-g-s~~l~viD~~t~~---v~~~I~Vg~~~~p~~~~nele~~--dg~ly-vn~~~~~~V~vID~~t 181 (266)
T 2iwa_A 115 DGKILYGSD-G-TSILYEIDPHTFK---LIKKHNVKYNGHRVIRLNELEYI--NGEVW-ANIWQTDCIARISAKD 181 (266)
T ss_dssp CSSSEEEEC-S-SSEEEEECTTTCC---EEEEEECEETTEECCCEEEEEEE--TTEEE-EEETTSSEEEEEETTT
T ss_pred CCCEEEEEC-C-CCeEEEEECCCCc---EEEEEEECCCCcccccceeEEEE--CCEEE-EecCCCCeEEEEECCC
Confidence 999999998 4 5699999987643 345666654 565 34455554 56644 3334466899998873
No 189
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=45.96 E-value=91 Score=23.29 Aligned_cols=66 Identities=12% Similarity=0.153 Sum_probs=40.3
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 132 QAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
..+.++++..-.. ..--.++..+.. ....++...... +......+++.|+++.+.+|-+++++.+.
T Consensus 49 ~~dlvi~D~~l~~-~~g~~l~~~l~~~~~~~~~~ii~~s~~~-~~~~~~~~~~~ga~~~l~KP~~~~~l~~~ 118 (128)
T 1jbe_A 49 GYGFVISDWNMPN-MDGLELLKTIRAXXAMSALPVLMVTAEA-KKENIIAAAQAGASGYVVKPFTAATLEEK 118 (128)
T ss_dssp CCCEEEEESCCSS-SCHHHHHHHHHC--CCTTCCEEEEESSC-CHHHHHHHHHTTCSEEEESSCCHHHHHHH
T ss_pred CCCEEEEeCCCCC-CCHHHHHHHHHhhcccCCCcEEEEecCc-cHHHHHHHHHhCcCceeecCCCHHHHHHH
Confidence 4677777543221 222334555443 234565554443 34456788999999999999999877543
No 190
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=45.92 E-value=30 Score=34.71 Aligned_cols=55 Identities=16% Similarity=0.215 Sum_probs=35.6
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccCC-CceEEE-EcCCHHHHHHHHHHhhcccCeEEEe
Q 015764 132 QAENIVIDLPDWQVIPAENIVASFQGS-GKTVFA-ISKTPSEAQIFLEALEQGLGGIVLK 189 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~~-~~~l~a-~v~~~~eA~~al~~LE~G~DGVvl~ 189 (401)
.++.++++...-.--.+.++|.++... +..|++ .+.+.++|+.+. +.|+|+|++.
T Consensus 156 GvdvIvldta~G~~~~~~e~I~~ik~~~~i~Vi~g~V~t~e~A~~a~---~aGAD~I~vG 212 (400)
T 3ffs_A 156 GVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELI---ENGADGIKVG 212 (400)
T ss_dssp TCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEEEEEECSHHHHHHHH---HTTCSEEEEC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHhcCCCeEEEeecCCHHHHHHHH---HcCCCEEEEe
Confidence 588888854321111224455555443 567875 899999997755 6799999993
No 191
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=45.88 E-value=94 Score=23.73 Aligned_cols=81 Identities=11% Similarity=0.182 Sum_probs=45.9
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (401)
...+.++.-..... ...+.++++..-.. +.--.++..+. .....++...... +......+++.|++|.+.+|-++
T Consensus 34 ~~~~~~~al~~~~~-~~~dlvilD~~lp~-~~g~~~~~~l~~~~~~~~ii~ls~~~-~~~~~~~~~~~ga~~~l~Kp~~~ 110 (133)
T 3b2n_A 34 DTDNGLDAMKLIEE-YNPNVVILDIEMPG-MTGLEVLAEIRKKHLNIKVIIVTTFK-RPGYFEKAVVNDVDAYVLKERSI 110 (133)
T ss_dssp EESCHHHHHHHHHH-HCCSEEEECSSCSS-SCHHHHHHHHHHTTCSCEEEEEESCC-CHHHHHHHHHTTCSEEEETTSCH
T ss_pred EcCCHHHHHHHHhh-cCCCEEEEecCCCC-CCHHHHHHHHHHHCCCCcEEEEecCC-CHHHHHHHHHcCCcEEEECCCCH
Confidence 34555443332222 24677777433211 22223344332 2345666665543 34456788899999999999999
Q ss_pred HHHHHH
Q 015764 194 KAVLAL 199 (401)
Q Consensus 194 ~ev~~l 199 (401)
+++.+.
T Consensus 111 ~~L~~~ 116 (133)
T 3b2n_A 111 EELVET 116 (133)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887654
No 192
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=45.48 E-value=62 Score=25.42 Aligned_cols=66 Identities=12% Similarity=0.206 Sum_probs=39.0
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 132 QAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
..+.++++..-.. +.--.++..++. ....++......+ ...+..+++.|++|.+.+|-+++++.+.
T Consensus 61 ~~dlillD~~lp~-~~g~~l~~~l~~~~~~~~~piiils~~~~-~~~~~~~~~~ga~~~l~KP~~~~~L~~~ 130 (149)
T 1i3c_A 61 RPNLILLDLNLPK-KDGREVLAEIKQNPDLKRIPVVVLTTSHN-EDDVIASYELHVNCYLTKSRNLKDLFKM 130 (149)
T ss_dssp CCSEEEECSCCSS-SCHHHHHHHHHHCTTTTTSCEEEEESCCC-HHHHHHHHHTTCSEEEECCSSHHHHHHH
T ss_pred CCCEEEEeCCCCC-CcHHHHHHHHHhCcCcCCCeEEEEECCCC-hHHHHHHHHcCCcEEEECCCCHHHHHHH
Confidence 4577777432111 122233444432 2345665554433 3446688899999999999999887654
No 193
>1q7h_A Conserved hypothetical protein; structural genomics, MCSG, PSI, PR structure initiative; 2.10A {Thermoplasma acidophilum dsm 1728} SCOP: b.122.1.1 d.17.6.2
Probab=45.47 E-value=14 Score=31.54 Aligned_cols=70 Identities=21% Similarity=0.283 Sum_probs=48.0
Q ss_pred eEEEEeecccc-CCCCCCCC-eeeecCCceeE----EEecCCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEEeccce
Q 015764 254 GLFLVHSECLE-SNYIASRP-FRVNAGPVHAY----VLVPGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPL 327 (401)
Q Consensus 254 glFLVhsEt~e-s~Yva~RP-FRVNAGaVHaY----v~~pggkT~YLSEL~sG~eVLvVd~~G~tR~~~VGRvKIE~RPL 327 (401)
+.|.-+=++.. .|| ++| ..|+.||+.+. =++|-|=+..=.+.+.||.|.|++.+|+ ..-+|++..-..-|
T Consensus 54 g~~~ptl~~l~~l~~--~~~~v~vd~ga~~~l~~Ga~ll~~GV~~~~~~~~~gd~V~V~~~~g~--~ia~G~~~~ss~e~ 129 (153)
T 1q7h_A 54 GDLIPSVYLLNYRNP--SRNIVTVDEGAEPHILNGSDLFAPGIVSMDDSIRKGDMIFVKSSKGY--FIAVGMAEMDAGEV 129 (153)
T ss_dssp SSEEECHHHHHHSCC--SSSEEEECTTTHHHHTTTCCEEGGGEEEECTTCCTTCEEEEEETTSC--EEEEEEESSCHHHH
T ss_pred CeeeeehHHHhhCCc--cCCEEEECHhHHHHHHcCCCcCccccCcccCceeCCCEEEEEECCCC--EEEEEEEecCHHHH
Confidence 34444444432 233 333 78999998765 4556677888789999999999999774 47888887644433
No 194
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=44.95 E-value=59 Score=29.33 Aligned_cols=101 Identities=17% Similarity=0.223 Sum_probs=0.0
Q ss_pred hHHHHHhCCcEE---EEcCcc------------hhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEe----------
Q 015764 63 MTAAVERGWNTF---VFLSEN------------QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEV---------- 117 (401)
Q Consensus 63 vt~AlEsG~~~~---v~~~~~------------~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v---------- 117 (401)
+..|++.|++.+ +..... .+.+++++-. .++.+
T Consensus 105 v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~----------------------viv~~~~~G~~l~~~ 162 (273)
T 2qjg_A 105 VEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMP----------------------LIAMMYPRGKHIQNE 162 (273)
T ss_dssp HHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCC----------------------EEEEEEECSTTCSCT
T ss_pred HHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCC----------------------EEEEeCCCCcccCCC
Q ss_pred cChhhhhhhccccCC--CCeEEEeC-CCCeeeehhhhhhcccCCCceEEEEcC--CHHHHHH-HHHHhhcccCeEEE
Q 015764 118 STPQELQQLQPADGQ--AENIVIDL-PDWQVIPAENIVASFQGSGKTVFAISK--TPSEAQI-FLEALEQGLGGIVL 188 (401)
Q Consensus 118 ~~~e~~e~~~~~~~~--~~~vvv~~-~DW~iIPlENliA~~q~~~~~l~a~v~--~~~eA~~-al~~LE~G~DGVvl 188 (401)
.++++.++++....+ ++++.+.. .||.. +..+.+.. .-.......++ +.+++.. +..+++.|+|||.+
T Consensus 163 ~~~~~~~~~a~~a~~~Gad~i~~~~~~~~~~--l~~i~~~~-~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~v 236 (273)
T 2qjg_A 163 RDPELVAHAARLGAELGADIVKTSYTGDIDS--FRDVVKGC-PAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAV 236 (273)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCCSSHHH--HHHHHHHC-SSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEEC
T ss_pred CCHhHHHHHHHHHHHcCCCEEEECCCCCHHH--HHHHHHhC-CCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEe
No 195
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=44.80 E-value=27 Score=30.66 Aligned_cols=51 Identities=27% Similarity=0.398 Sum_probs=33.8
Q ss_pred CCceeEEEe-c-CCceeeeeeccCCCeEEEE-cCCCCeeEEeeeeEEEeccceeEEEE
Q 015764 278 GPVHAYVLV-P-GGKTCYLSELKSGKEVIVV-DQKGRQRTAVVGRVKIESRPLILVEA 332 (401)
Q Consensus 278 GaVHaYv~~-p-ggkT~YLSEL~sG~eVLvV-d~~G~tR~~~VGRvKIE~RPLlLVeA 332 (401)
|-+.=|+.. | |.-|+||.+|+.||+|.+- ...|... .-.. -..+|++||=+
T Consensus 61 ~~l~~~v~~~~~G~~s~~l~~l~~Gd~v~v~~gP~G~f~---l~~~-~~~~~~vliag 114 (248)
T 1fdr_A 61 PDLEFYLVTVPDGKLSPRLAALKPGDEVQVVSEAAGFFV---LDEV-PHCETLWMLAT 114 (248)
T ss_dssp SSEEEEEECCTTCSSHHHHHTCCTTCEEEEESSCBCCCS---GGGS-CCCSEEEEEEE
T ss_pred CcEEEEEEEeCCCchhhHHHhCCCcCEEEEecCCcceeE---cCCC-CCCceEEEEEe
Confidence 555556654 5 5578999999999999998 7777631 0000 01578888754
No 196
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=44.23 E-value=20 Score=33.55 Aligned_cols=32 Identities=16% Similarity=0.128 Sum_probs=27.4
Q ss_pred CCCcEEEEEe-CchhHhHHHHHhCCcEEEEcCc
Q 015764 48 SKPKRVWIWT-ESKQVMTAAVERGWNTFVFLSE 79 (401)
Q Consensus 48 ~~~K~vWiw~-~~K~~vt~AlEsG~~~~v~~~~ 79 (401)
..-+.|++|| .+++.|...++.|+|+|+.+..
T Consensus 266 ~~Gl~V~~WTVn~~~~~~~l~~~GVDgIiTD~P 298 (313)
T 3l12_A 266 DLGLIVLTWTVNEPEDIRRMATTGVDGIVTDYP 298 (313)
T ss_dssp HTTCEEEEBCCCSHHHHHHHHHHTCSEEEESCH
T ss_pred HCCCEEEEEcCCCHHHHHHHHHcCCCEEEeCCH
Confidence 3567899999 6799999999999999998653
No 197
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=44.13 E-value=53 Score=25.25 Aligned_cols=77 Identities=14% Similarity=0.188 Sum_probs=45.6
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehh---hhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEec
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAE---NIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKV 190 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlE---NliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~ 190 (401)
...+.++.-..... ...+.++++ | .|-. .++..+. .....++...... +......+++.|+++++.+|
T Consensus 33 ~~~~~~~a~~~l~~-~~~dlvi~d---~--~~~~~g~~~~~~l~~~~~~~pii~ls~~~-~~~~~~~~~~~g~~~~l~kP 105 (142)
T 2qxy_A 33 WAKNEQEAFTFLRR-EKIDLVFVD---V--FEGEESLNLIRRIREEFPDTKVAVLSAYV-DKDLIINSVKAGAVDYILKP 105 (142)
T ss_dssp EESSHHHHHHHHTT-SCCSEEEEE---C--TTTHHHHHHHHHHHHHCTTCEEEEEESCC-CHHHHHHHHHHTCSCEEESS
T ss_pred EECCHHHHHHHHhc-cCCCEEEEe---C--CCCCcHHHHHHHHHHHCCCCCEEEEECCC-CHHHHHHHHHCCcceeEeCC
Confidence 34555543332222 346778884 3 2322 2333332 2245666665543 34566788999999999999
Q ss_pred CCHHHHHHH
Q 015764 191 EDVKAVLAL 199 (401)
Q Consensus 191 ~d~~ev~~l 199 (401)
-+++++.+.
T Consensus 106 ~~~~~l~~~ 114 (142)
T 2qxy_A 106 FRLDYLLER 114 (142)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 999887654
No 198
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=43.94 E-value=23 Score=31.86 Aligned_cols=32 Identities=13% Similarity=0.132 Sum_probs=27.3
Q ss_pred CCCcEEEEEe-CchhHhHHHHHhCCcEEEEcCc
Q 015764 48 SKPKRVWIWT-ESKQVMTAAVERGWNTFVFLSE 79 (401)
Q Consensus 48 ~~~K~vWiw~-~~K~~vt~AlEsG~~~~v~~~~ 79 (401)
.+.+.||+|| .+++.+...++.|+|+|+.+..
T Consensus 205 ~~G~~v~~wTvn~~~~~~~l~~~GvdgI~TD~p 237 (247)
T 2otd_A 205 DAGLRILVYTVNKPQHAAELLRWGVDCICTDAI 237 (247)
T ss_dssp HTTCEEEEECCCCHHHHHHHHHHTCSEEEESCT
T ss_pred HCCCEEEEEccCCHHHHHHHHHcCCCEEEeCCH
Confidence 4567899999 6789999999999999998653
No 199
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=43.23 E-value=90 Score=26.09 Aligned_cols=81 Identities=17% Similarity=0.204 Sum_probs=44.5
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (401)
...+.++.-..... ...|.++++..-+.. .--.++..+. .....++...... +......+++.|++|++.+|-++
T Consensus 36 ~~~~~~~al~~~~~-~~~dlvllD~~lp~~-~g~~~~~~lr~~~~~~~ii~ls~~~-~~~~~~~~~~~Ga~~~l~Kp~~~ 112 (215)
T 1a04_A 36 EASNGEQGIELAES-LDPDLILLDLNMPGM-NGLETLDKLREKSLSGRIVVFSVSN-HEEDVVTALKRGADGYLLKDMEP 112 (215)
T ss_dssp EESSHHHHHHHHHH-HCCSEEEEETTSTTS-CHHHHHHHHHHSCCCSEEEEEECCC-CHHHHHHHHHTTCSEEEETTCCH
T ss_pred EeCCHHHHHHHHHh-cCCCEEEEeCCCCCC-cHHHHHHHHHHhCCCCcEEEEECCC-CHHHHHHHHHcCCcEEEeCCCCH
Confidence 34555543332222 246778875432211 1112233332 2244555554432 34456788899999999999999
Q ss_pred HHHHHH
Q 015764 194 KAVLAL 199 (401)
Q Consensus 194 ~ev~~l 199 (401)
+++.+.
T Consensus 113 ~~L~~~ 118 (215)
T 1a04_A 113 EDLLKA 118 (215)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887644
No 200
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=42.94 E-value=20 Score=32.62 Aligned_cols=51 Identities=18% Similarity=0.200 Sum_probs=33.5
Q ss_pred CCeeeehhhhhhcccCCCceEEE-EcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHH
Q 015764 142 DWQVIPAENIVASFQGSGKTVFA-ISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLA 198 (401)
Q Consensus 142 DW~iIPlENliA~~q~~~~~l~a-~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~ 198 (401)
+|..+. +.+|++++..+-++++ .+++.++++. .++.|+|||+ ||+|+.+.+
T Consensus 194 ~~~~~~-~~~v~~~~~~G~~v~~WTvn~~~~~~~---l~~~GVdgIi--TD~P~~~~~ 245 (252)
T 3qvq_A 194 HQSFFD-VQQVSDIKAAGYKVLAFTINDESLALK---LYNQGLDAVF--SDYPQKIQS 245 (252)
T ss_dssp EGGGCC-HHHHHHHHHTTCEEEEECCCCHHHHHH---HHHTTCCEEE--ESSHHHHHH
T ss_pred chhhCC-HHHHHHHHHCCCEEEEEcCCCHHHHHH---HHHcCCCEEE--eCCHHHHHH
Confidence 344444 3566666666666655 4566666554 5579999988 888887653
No 201
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=42.73 E-value=47 Score=25.53 Aligned_cols=84 Identities=13% Similarity=0.089 Sum_probs=45.8
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc----CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ----GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q----~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
...+.++.-.........+.+|++..-..-..--.++..+. .....++...... +......+++.|+++++.+|-
T Consensus 34 ~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~-~~~~~~~~~~~g~~~~l~KP~ 112 (140)
T 3lua_A 34 EVENLKKFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIRNNSRTANTPVIIATKSD-NPGYRHAALKFKVSDYILKPY 112 (140)
T ss_dssp EECSHHHHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHHHSGGGTTCCEEEEESCC-CHHHHHHHHHSCCSEEEESSC
T ss_pred EECCHHHHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHHhCcccCCCCEEEEeCCC-CHHHHHHHHHcCCCEEEECCC
Confidence 35555543333322135677777332110111122333332 2345666655443 334567788999999999999
Q ss_pred CHHHHHHHH
Q 015764 192 DVKAVLALK 200 (401)
Q Consensus 192 d~~ev~~l~ 200 (401)
++.++.+.-
T Consensus 113 ~~~~l~~~i 121 (140)
T 3lua_A 113 PTKRLENSV 121 (140)
T ss_dssp CTTHHHHHH
T ss_pred CHHHHHHHH
Confidence 988776543
No 202
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=42.63 E-value=68 Score=28.38 Aligned_cols=59 Identities=19% Similarity=0.081 Sum_probs=46.6
Q ss_pred eeeehhhhhhccc-CCCceEEEEcCCHH-----HHHHHHHHhhcccCeEEEecCCHHHHHHHHHhh
Q 015764 144 QVIPAENIVASFQ-GSGKTVFAISKTPS-----EAQIFLEALEQGLGGIVLKVEDVKAVLALKEYF 203 (401)
Q Consensus 144 ~iIPlENliA~~q-~~~~~l~a~v~~~~-----eA~~al~~LE~G~DGVvl~~~d~~ev~~l~~~~ 203 (401)
+|-.||.+++.+. +.+..+.-+.++.. -++..+..++. .+-|++.+-|+..+..+++..
T Consensus 78 ~iptL~evl~~~~~~~~~~l~iEiK~~~~~~~~~~~~v~~~l~~-~~~v~i~Sf~~~~l~~~~~~~ 142 (224)
T 1vd6_A 78 DLPRLEEVLALKEAFPQAVFNVELKSFPGLGEEAARRLAALLRG-REGVWVSSFDPLALLALRKAA 142 (224)
T ss_dssp TCCBHHHHHGGGGTCTTCEEEEEECCCTTSHHHHHHHHHHHTTT-CSSEEEEESCHHHHHHHHHHC
T ss_pred CCCCHHHHHHhhhccCCceEEEEECCCCCccHHHHHHHHHHHhc-CCcEEEEeCCHHHHHHHHHHC
Confidence 3444999999987 55678899988754 25678888888 888999999999888887754
No 203
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=42.29 E-value=19 Score=32.52 Aligned_cols=46 Identities=13% Similarity=0.107 Sum_probs=31.0
Q ss_pred hhhhhcccCCCceEEE-EcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 149 ENIVASFQGSGKTVFA-ISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 149 ENliA~~q~~~~~l~a-~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
..+|++++..+-++++ .+++.++++. .++.|+|||+ ||+|+.+.++
T Consensus 186 ~~~v~~~~~~G~~v~~WTVn~~~~~~~---l~~~GVdgIi--TD~P~~~~~~ 232 (238)
T 3no3_A 186 PDWVKDCKVLGMTSNVWTVDDPKLMEE---MIDMGVDFIT--TDLPEETQKI 232 (238)
T ss_dssp TTHHHHHHHTTCEEEEECCCSHHHHHH---HHHHTCSEEE--ESCHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEECCCCHHHHHH---HHHcCCCEEE--CCCHHHHHHH
Confidence 3567776666656554 4566666554 5678999988 7889876543
No 204
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=42.27 E-value=23 Score=32.04 Aligned_cols=31 Identities=0% Similarity=-0.027 Sum_probs=26.2
Q ss_pred CCCcEEEEEe-CchhHhHH-HHHhCCcEEEEcC
Q 015764 48 SKPKRVWIWT-ESKQVMTA-AVERGWNTFVFLS 78 (401)
Q Consensus 48 ~~~K~vWiw~-~~K~~vt~-AlEsG~~~~v~~~ 78 (401)
.+.+.||+|| .+++.+.. .++.|+|+|+.+.
T Consensus 192 ~~G~~v~~wTvn~~~~~~~~l~~~GvdgIiTD~ 224 (248)
T 1zcc_A 192 KAGLEIMVYYGGDDMAVHREIATSDVDYINLDR 224 (248)
T ss_dssp HHTCEEEEECCCCCHHHHHHHHHSSCSEEEESC
T ss_pred HCCCEEEEECCCCHHHHHHHHHHcCCCEEEECC
Confidence 3567899999 57888999 9999999999865
No 205
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=42.05 E-value=2.2e+02 Score=26.52 Aligned_cols=110 Identities=10% Similarity=-0.013 Sum_probs=59.8
Q ss_pred EEEEeCchhHhHHHHHhCCcEE-EEcC---c-----------chhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEe
Q 015764 53 VWIWTESKQVMTAAVERGWNTF-VFLS---E-----------NQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEV 117 (401)
Q Consensus 53 vWiw~~~K~~vt~AlEsG~~~~-v~~~---~-----------~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v 117 (401)
+..+....+++..+.+.|++.+ ++++ . +.+..+++.+. -+.+ ..+.+
T Consensus 24 ~i~~~~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~----------------~~iP--v~~k~ 85 (305)
T 2nv1_A 24 VIMDVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNA----------------VSIP--VMAKA 85 (305)
T ss_dssp EEEEESSHHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHH----------------CSSC--EEEEE
T ss_pred eeecCCHHHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHh----------------CCCC--EEecc
Confidence 4446677899999999999999 5531 0 11222222111 1111 11233
Q ss_pred cC--hhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcc--cCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEe
Q 015764 118 ST--PQELQQLQPADGQAENIVIDLPDWQVIPAENIVASF--QGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLK 189 (401)
Q Consensus 118 ~~--~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~--q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~ 189 (401)
.. .++.+.+.. ..++.|+. ..+ ++.+.+...+ +..+..++..+.+.+||..+ ++.|+|-|.+.
T Consensus 86 r~g~~~~~~~~~a--~GAd~V~~-~~~---l~~~~~~~~i~~~~~g~~v~~~~~~~~e~~~a---~~~Gad~V~~~ 152 (305)
T 2nv1_A 86 RIGHIVEARVLEA--MGVDYIDE-SEV---LTPADEEFHLNKNEYTVPFVCGCRDLGEATRR---IAEGASMLRTK 152 (305)
T ss_dssp CTTCHHHHHHHHH--HTCSEEEE-CTT---SCCSCSSCCCCGGGCSSCEEEEESSHHHHHHH---HHTTCSEEEEC
T ss_pred cccchHHHHHHHH--CCCCEEEE-ecc---CCHHHHHHHHHHhccCCcEEEEeCCHHHHHHH---HHCCCCEEEec
Confidence 32 333333322 35777762 222 2333322221 12345789999999998766 48899998883
No 206
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=42.03 E-value=47 Score=29.78 Aligned_cols=99 Identities=18% Similarity=0.183 Sum_probs=57.9
Q ss_pred EEEEEEEEEcCCc-ceEEEeecC---CCCCCceEEEeccCceEEEEeeccccCCCCCCCCeeee-----cCCceeEEEe-
Q 015764 217 KATVTRVDVAGMG-DRVCVDLCS---LMRPGEGLLVGSFARGLFLVHSECLESNYIASRPFRVN-----AGPVHAYVLV- 286 (401)
Q Consensus 217 ~atVt~V~~vGmG-DRVCVDtcs---ll~~GEGmLVGS~s~glFLVhsEt~es~Yva~RPFRVN-----AGaVHaYv~~- 286 (401)
+++|++++.+.-. -|+.+..-. -+.||+=+.+ +-.. ......|||-+- .|-+.=.+..
T Consensus 7 ~~~V~~~~~~t~~~~~l~l~~~~~~~~~~pGQ~v~l----------~~~~--~~~~~~R~ySi~s~~~~~~~l~~~vk~~ 74 (262)
T 1ep3_B 7 MMTVVSQREVAYNIFEMVLKGTLVDEMDLPGQFLHL----------AVPN--GAMLLRRPISISSWDKRAKTCTILYRIG 74 (262)
T ss_dssp EEEEEEEEEEETTEEEEEEESGGGGGCCSTTCEEEE----------CCSC--TTCCSCEEEECCEEETTTTEEEEEEECC
T ss_pred ceEEEEEEEecCCEEEEEEEcCcccccCCCCceEEE----------EcCC--CCceeeEEEEeeeecCCCCEEEEEEEEe
Confidence 5788888877532 133333322 2344443222 2111 112456777652 3555656666
Q ss_pred -cCCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEEe--ccceeEEEE
Q 015764 287 -PGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIE--SRPLILVEA 332 (401)
Q Consensus 287 -pggkT~YLSEL~sG~eVLvVd~~G~tR~~~VGRvKIE--~RPLlLVeA 332 (401)
.|.-|+||..|+.||+|.+-...|+.-. ..-. .+|++||=+
T Consensus 75 ~~G~~S~~l~~l~~Gd~v~v~gP~G~~f~-----l~~~~~~~~~lliag 118 (262)
T 1ep3_B 75 DETTGTYKLSKLESGAKVDVMGPLGNGFP-----VAEVTSTDKILIIGG 118 (262)
T ss_dssp CTTSHHHHHHTCCTTCEEEEEEEESBCCC-----CTTCCTTSEEEEEEE
T ss_pred cCCchHHHHhcCCCCCEEEEEcccCCCcc-----CCCccCCCeEEEEEC
Confidence 6888999999999999999887776211 1111 578888755
No 207
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=41.85 E-value=54 Score=24.66 Aligned_cols=66 Identities=8% Similarity=0.140 Sum_probs=39.8
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 132 QAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
..+.++++..-.. ..--.++..+.. ....++..... .+......+++.|+++.+.+|-+++++.+.
T Consensus 51 ~~dlvl~D~~l~~-~~g~~~~~~l~~~~~~~~~~ii~~s~~-~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 120 (129)
T 1p6q_A 51 PHHLVISDFNMPK-MDGLGLLQAVRANPATKKAAFIILTAQ-GDRALVQKAAALGANNVLAKPFTIEKMKAA 120 (129)
T ss_dssp CCSEEEECSSSCS-SCHHHHHHHHTTCTTSTTCEEEECCSC-CCHHHHHHHHHHTCSCEECCCSSHHHHHHH
T ss_pred CCCEEEEeCCCCC-CCHHHHHHHHhcCccccCCCEEEEeCC-CCHHHHHHHHHcCCCEEEECCCCHHHHHHH
Confidence 4566777332111 122234555543 23455555443 344566788899999999999999887643
No 208
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=41.78 E-value=79 Score=25.83 Aligned_cols=56 Identities=16% Similarity=0.045 Sum_probs=33.9
Q ss_pred CCCCeEEEeCCCCeee-ehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCC
Q 015764 131 GQAENIVIDLPDWQVI-PAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192 (401)
Q Consensus 131 ~~~~~vvv~~~DW~iI-PlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d 192 (401)
..++.+|+...+.... .+-.+...+ ....++++.+++.+..+.+. +.|+| ++.|..
T Consensus 83 ~~ad~Vi~~~~~~~~~~~~~~~~~~~-~~~~~iv~~~~~~~~~~~l~---~~G~~--vi~p~~ 139 (155)
T 2g1u_A 83 EKADMVFAFTNDDSTNFFISMNARYM-FNVENVIARVYDPEKIKIFE---ENGIK--TICPAV 139 (155)
T ss_dssp GGCSEEEECSSCHHHHHHHHHHHHHT-SCCSEEEEECSSGGGHHHHH---TTTCE--EECHHH
T ss_pred ccCCEEEEEeCCcHHHHHHHHHHHHH-CCCCeEEEEECCHHHHHHHH---HCCCc--EEcHHH
Confidence 4578888865554322 112222222 33568999999999887533 48999 555553
No 209
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=41.65 E-value=65 Score=25.19 Aligned_cols=40 Identities=10% Similarity=0.095 Sum_probs=28.6
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
...++......+ ......+++.|+++++.+|-+++++.+.
T Consensus 89 ~~pii~~t~~~~-~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 128 (152)
T 3heb_A 89 RSPVVILTTTDD-QREIQRCYDLGANVYITKPVNYENFANA 128 (152)
T ss_dssp TSCEEEEESCCC-HHHHHHHHHTTCSEEEECCSSHHHHHHH
T ss_pred CCCEEEEecCCC-HHHHHHHHHCCCcEEEeCCCCHHHHHHH
Confidence 445665555443 3445678899999999999999877644
No 210
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=41.54 E-value=46 Score=26.49 Aligned_cols=40 Identities=25% Similarity=0.266 Sum_probs=29.1
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
...++...... +......+++.|+++++.+|-++.++.+.
T Consensus 111 ~~~ii~ls~~~-~~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 150 (157)
T 3hzh_A 111 NARVIMISALG-KEQLVKDCLIKGAKTFIVKPLDRAKVLQR 150 (157)
T ss_dssp TCCEEEEESCC-CHHHHHHHHHTTCSEEEESSCCHHHHHHH
T ss_pred CCcEEEEeccC-cHHHHHHHHHcCCCEEEeCCCCHHHHHHH
Confidence 45666655543 33456788999999999999999877543
No 211
>3gt2_A Putative uncharacterized protein; P60 domain, antigen, unknown function; HET: EDO; 1.75A {Mycobacterium avium subsp}
Probab=41.27 E-value=11 Score=31.98 Aligned_cols=30 Identities=10% Similarity=0.165 Sum_probs=23.8
Q ss_pred CceeeeeecCCCCEEEEEecCCCcccceeee
Q 015764 365 EKAIPVTSLKVGDEVLLRVQGAARHTGIEIQ 395 (401)
Q Consensus 365 g~~vsVt~LK~GD~VL~~~~~~gRHfG~~I~ 395 (401)
++.|+..+|+|||.|.... .+..|+||-+.
T Consensus 82 g~~v~~~~~~pGDlvff~~-~~~~HVgIy~G 111 (142)
T 3gt2_A 82 GQKILPQQARKGDLIFYGP-EGTQSVAMYLG 111 (142)
T ss_dssp SEEECGGGCCTTCEEEESG-GGCSEEEEEEE
T ss_pred CceechhhCCCCCEEEeCC-CCCCEEEEEec
Confidence 6788889999999987643 33579999874
No 212
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=40.80 E-value=70 Score=28.27 Aligned_cols=122 Identities=16% Similarity=0.258 Sum_probs=0.0
Q ss_pred hHhHHHHHhCCcEEEEcCcc---------hhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccC
Q 015764 61 QVMTAAVERGWNTFVFLSEN---------QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADG 131 (401)
Q Consensus 61 ~~vt~AlEsG~~~~v~~~~~---------~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~ 131 (401)
+++..+.+.|++.+.+...+ .+.++++.+-..+ |+++.++ |.++++.+.+...-
T Consensus 35 ~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~i-Pvi~~Gg---------------i~~~~~~~~~~~~G- 97 (252)
T 1ka9_F 35 EAARAYDEAGADELVFLDISATHEERAILLDVVARVAERVFI-PLTVGGG---------------VRSLEDARKLLLSG- 97 (252)
T ss_dssp HHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTTCCS-CEEEESS---------------CCSHHHHHHHHHHT-
T ss_pred HHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHhCCC-CEEEECC---------------cCCHHHHHHHHHcC-
Q ss_pred CCCeEEEeCCCCeeee----hhhhhhcccCCCceEEEEcCC-----------------HHHHHHHHHHhhcccCeEEEec
Q 015764 132 QAENIVIDLPDWQVIP----AENIVASFQGSGKTVFAISKT-----------------PSEAQIFLEALEQGLGGIVLKV 190 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIP----lENliA~~q~~~~~l~a~v~~-----------------~~eA~~al~~LE~G~DGVvl~~ 190 (401)
++.+++ +-..++ ++.+...+......+-..+++ ..-.+.+..+.+.|+++++++.
T Consensus 98 -ad~V~l---g~~~l~~p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~ 173 (252)
T 1ka9_F 98 -ADKVSV---NSAAVRRPELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVELGAGEILLTS 173 (252)
T ss_dssp -CSEEEE---CHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHHTCCEEEEEE
T ss_pred -CCEEEE---ChHHHhCcHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHcCCCEEEEec
Q ss_pred CC---------HHHHHHHHHhh
Q 015764 191 ED---------VKAVLALKEYF 203 (401)
Q Consensus 191 ~d---------~~ev~~l~~~~ 203 (401)
.+ .+.++++++.+
T Consensus 174 ~~~~g~~~g~~~~~i~~l~~~~ 195 (252)
T 1ka9_F 174 MDRDGTKEGYDLRLTRMVAEAV 195 (252)
T ss_dssp TTTTTTCSCCCHHHHHHHHHHC
T ss_pred ccCCCCcCCCCHHHHHHHHHHc
No 213
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=40.71 E-value=87 Score=26.94 Aligned_cols=71 Identities=8% Similarity=0.048 Sum_probs=41.8
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHH-HHHHHHHhhcccCeEEEecC---------CHHHHHHHHH
Q 015764 132 QAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSE-AQIFLEALEQGLGGIVLKVE---------DVKAVLALKE 201 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~e-A~~al~~LE~G~DGVvl~~~---------d~~ev~~l~~ 201 (401)
.++.+++...... =-++.++..++..+.+++..+.++.+ .+.+..+++.|+|.|.+.+. +.+.++++++
T Consensus 77 Gad~v~v~~~~~~-~~~~~~~~~~~~~g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g~~g~~~~~~~~~~i~~l~~ 155 (211)
T 3f4w_A 77 GADYVTVLGVTDV-LTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQAAGRKPIDDLITMLK 155 (211)
T ss_dssp TCSEEEEETTSCH-HHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHHTCCEEEEECCHHHHHTTCCSHHHHHHHHH
T ss_pred CCCEEEEeCCCCh-hHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHcCCCEEEEcCCCcccccCCCCHHHHHHHHH
Confidence 5788888655310 01355666655555566655433322 24456678899999887653 4556666655
Q ss_pred hh
Q 015764 202 YF 203 (401)
Q Consensus 202 ~~ 203 (401)
.+
T Consensus 156 ~~ 157 (211)
T 3f4w_A 156 VR 157 (211)
T ss_dssp HC
T ss_pred Hc
Confidence 43
No 214
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=40.70 E-value=78 Score=24.16 Aligned_cols=81 Identities=9% Similarity=0.053 Sum_probs=44.9
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (401)
...+.++.-.... ....+.++++..-.. +.--.++..+. .....++...... +......+++.|++|.+.+|-++
T Consensus 32 ~~~~~~~al~~~~-~~~~dlvl~D~~l~~-~~g~~~~~~l~~~~~~~~ii~~s~~~-~~~~~~~~~~~ga~~~l~KP~~~ 108 (132)
T 3crn_A 32 IAATAGEGLAKIE-NEFFNLALFXIKLPD-MEGTELLEKAHKLRPGMKKIMVTGYA-SLENSVFSLNAGADAYIMKPVNP 108 (132)
T ss_dssp EESSHHHHHHHHH-HSCCSEEEECSBCSS-SBHHHHHHHHHHHCTTSEEEEEESCC-CHHHHHHHHHTTCSEEEESSCCH
T ss_pred EeCCHHHHHHHHh-cCCCCEEEEecCCCC-CchHHHHHHHHhhCCCCcEEEEeccc-cHHHHHHHHhccchhhccCCCCH
Confidence 3555544332222 234677777432111 11122333332 2345666655443 34456788999999999999999
Q ss_pred HHHHHH
Q 015764 194 KAVLAL 199 (401)
Q Consensus 194 ~ev~~l 199 (401)
+++.+.
T Consensus 109 ~~L~~~ 114 (132)
T 3crn_A 109 RDLLEK 114 (132)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877643
No 215
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=39.34 E-value=2.4e+02 Score=26.18 Aligned_cols=80 Identities=23% Similarity=0.327 Sum_probs=54.9
Q ss_pred eeEEEecCCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEEec--ccee-EEEEEecCCCCeEEEEEeEecceEEEecC
Q 015764 281 HAYVLVPGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIES--RPLI-LVEAKTNSGDQTLYGIILQNAETVALVSP 357 (401)
Q Consensus 281 HaYv~~pggkT~YLSEL~sG~eVLvVd~~G~tR~~~VGRvKIE~--RPLl-LVeAe~~~~~G~~~sviLQnAETIRLv~p 357 (401)
+.|-++++|+.-|.|. . .++|.++|++-.. +++|+++.. +|+- +=|.+.. +|+.+.-. .+...|..+.|
T Consensus 106 ~Gwglt~dg~~L~vSd-g-s~~l~~iDp~t~~---~~~~I~V~~~g~~~~~lNeLe~~--~G~lyanv-w~s~~I~vIDp 177 (243)
T 3mbr_X 106 EGWALTSDDSHLYMSD-G-TAVIRKLDPDTLQ---QVGSIKVTAGGRPLDNLNELEWV--NGELLANV-WLTSRIARIDP 177 (243)
T ss_dssp CCCEEEECSSCEEEEC-S-SSEEEEECTTTCC---EEEEEECEETTEECCCEEEEEEE--TTEEEEEE-TTTTEEEEECT
T ss_pred CceEEeeCCCEEEEEC-C-CCeEEEEeCCCCe---EEEEEEEccCCcccccceeeEEe--CCEEEEEE-CCCCeEEEEEC
Confidence 6788999999999998 4 6789999986543 456777654 3543 3466664 68765333 33558999999
Q ss_pred CCCCCCCCceeeeeec
Q 015764 358 CKGTGEQEKAIPVTSL 373 (401)
Q Consensus 358 ~~g~~~~g~~vsVt~L 373 (401)
.. |+.+...+|
T Consensus 178 ~t-----G~V~~~idl 188 (243)
T 3mbr_X 178 AS-----GKVVAWIDL 188 (243)
T ss_dssp TT-----CBEEEEEEC
T ss_pred CC-----CCEEEEEEC
Confidence 83 566555553
No 216
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=39.09 E-value=40 Score=25.03 Aligned_cols=66 Identities=11% Similarity=0.216 Sum_probs=38.5
Q ss_pred CCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 132 QAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
..+.++++..-.. ..--.++..+. .....++...... +......+++.|+++.+.+|-+++++.+.
T Consensus 47 ~~dlil~D~~l~~-~~g~~~~~~l~~~~~~~~ii~~s~~~-~~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 114 (120)
T 1tmy_A 47 KPDIVTMDITMPE-MNGIDAIKEIMKIDPNAKIIVCSAMG-QQAMVIEAIKAGAKDFIVKPFQPSRVVEA 114 (120)
T ss_dssp CCSEEEEECSCGG-GCHHHHHHHHHHHCTTCCEEEEECTT-CHHHHHHHHHTTCCEEEESSCCHHHHHHH
T ss_pred CCCEEEEeCCCCC-CcHHHHHHHHHhhCCCCeEEEEeCCC-CHHHHHHHHHhCcceeEeCCCCHHHHHHH
Confidence 4577777433211 11122333332 2344565555443 33456778899999999999999877543
No 217
>3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A*
Probab=39.00 E-value=30 Score=33.97 Aligned_cols=30 Identities=17% Similarity=0.395 Sum_probs=26.4
Q ss_pred CcEEEEEe-CchhHhHHHHHhCCcEEEEcCc
Q 015764 50 PKRVWIWT-ESKQVMTAAVERGWNTFVFLSE 79 (401)
Q Consensus 50 ~K~vWiw~-~~K~~vt~AlEsG~~~~v~~~~ 79 (401)
-++|++|| .+.+.|...++.|+|+|+.+..
T Consensus 241 i~~V~vWTVNd~~~m~~l~~~GVDGIITD~P 271 (302)
T 3rlg_A 241 INKVYYWTVDKRSTTRDALDAGVDGIMTNYP 271 (302)
T ss_dssp CSEEEEECCCSHHHHHHHHHTTCSEEEESCH
T ss_pred eEEEEEEeCCCHHHHHHHHHcCCCEEECCCH
Confidence 47899999 6789999999999999998653
No 218
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=38.17 E-value=15 Score=30.23 Aligned_cols=30 Identities=40% Similarity=0.599 Sum_probs=21.9
Q ss_pred cceEEEecCCCCCCCCCceeeeeecCCCCEEEEEe
Q 015764 349 AETVALVSPCKGTGEQEKAIPVTSLKVGDEVLLRV 383 (401)
Q Consensus 349 AETIRLv~p~~g~~~~g~~vsVt~LK~GD~VL~~~ 383 (401)
+.++++++.+. ...+++.+|+|||.|+++-
T Consensus 11 p~~a~v~r~g~-----~~~i~~~~l~~GDiv~v~~ 40 (113)
T 2hc8_A 11 AKTAVVIRDGK-----EIAVPVEEVAVGDIVIVRP 40 (113)
T ss_dssp CSEEEEEETTE-----EEEEEGGGCCTTCEEEECT
T ss_pred CCEEEEEECCE-----EEEEEHHHCCCCCEEEECC
Confidence 45666666331 3569999999999999963
No 219
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=38.02 E-value=90 Score=23.27 Aligned_cols=81 Identities=11% Similarity=0.130 Sum_probs=45.6
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (401)
...+.++.-..... ...+.++++..-.. ..--.++..+. .....++..... .+......+++.|+++.+.+|-++
T Consensus 32 ~~~~~~~a~~~~~~-~~~dlvl~D~~l~~-~~g~~~~~~l~~~~~~~~ii~~s~~-~~~~~~~~~~~~g~~~~l~KP~~~ 108 (124)
T 1srr_A 32 QAANGLQALDIVTK-ERPDLVLLDMKIPG-MDGIEILKRMKVIDENIRVIIMTAY-GELDMIQESKELGALTHFAKPFDI 108 (124)
T ss_dssp EESSHHHHHHHHHH-HCCSEEEEESCCTT-CCHHHHHHHHHHHCTTCEEEEEESS-CCHHHHHHHHHHTCCCEEESSCCH
T ss_pred EeCCHHHHHHHHhc-cCCCEEEEecCCCC-CCHHHHHHHHHHhCCCCCEEEEEcc-CchHHHHHHHhcChHhhccCCCCH
Confidence 34555443322221 24677887543211 12223333332 234566655543 334556788899999999999999
Q ss_pred HHHHHH
Q 015764 194 KAVLAL 199 (401)
Q Consensus 194 ~ev~~l 199 (401)
+++.+.
T Consensus 109 ~~l~~~ 114 (124)
T 1srr_A 109 DEIRDA 114 (124)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887644
No 220
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=37.97 E-value=1.6e+02 Score=29.06 Aligned_cols=116 Identities=15% Similarity=0.079 Sum_probs=61.3
Q ss_pred CchhHhHHHHHhCCcEEEEcCcc--hh-hHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCC
Q 015764 58 ESKQVMTAAVERGWNTFVFLSEN--QQ-LAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAE 134 (401)
Q Consensus 58 ~~K~~vt~AlEsG~~~~v~~~~~--~~-~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~ 134 (401)
...+.+..++|.|+|.+.++..+ .+ ..+.+..+....| +.++.. ..+.++++...+.. ..+|
T Consensus 100 ~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~------------~~~Vi~-G~V~T~e~A~~a~~--aGaD 164 (361)
T 3r2g_A 100 NELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLG------------SRCIMA-GNVATYAGADYLAS--CGAD 164 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHT------------TCEEEE-EEECSHHHHHHHHH--TTCS
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcC------------CCeEEE-cCcCCHHHHHHHHH--cCCC
Confidence 35788999999999987775321 11 1111111111000 222211 25888887555443 3689
Q ss_pred eEEEeCC---CCe-------eeehhhhhhcccCCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 135 NIVIDLP---DWQ-------VIPAENIVASFQGSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 135 ~vvv~~~---DW~-------iIPlENliA~~q~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
.|++... -|+ -+|.=..|.+.-.....|++ .+.+..++..+ |..|+|+|++-+.
T Consensus 165 ~I~Vg~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~~PVIAdGGI~~~~di~kA---La~GAd~V~iGr~ 230 (361)
T 3r2g_A 165 IIKAGIGGGSVCSTRIKTGFGVPMLTCIQDCSRADRSIVADGGIKTSGDIVKA---LAFGADFVMIGGM 230 (361)
T ss_dssp EEEECCSSSSCHHHHHHHCCCCCHHHHHHHHTTSSSEEEEESCCCSHHHHHHH---HHTTCSEEEESGG
T ss_pred EEEEcCCCCcCccccccCCccHHHHHHHHHHHHhCCCEEEECCCCCHHHHHHH---HHcCCCEEEEChH
Confidence 9998322 111 13422223222221125776 56677776655 5579999998754
No 221
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=37.96 E-value=21 Score=32.40 Aligned_cols=31 Identities=16% Similarity=0.371 Sum_probs=26.6
Q ss_pred CCCcEEEEEe-CchhHhHHHHHhCCcEEEEcC
Q 015764 48 SKPKRVWIWT-ESKQVMTAAVERGWNTFVFLS 78 (401)
Q Consensus 48 ~~~K~vWiw~-~~K~~vt~AlEsG~~~~v~~~ 78 (401)
...+.||+|| .+++.+...++.|+|+|+.+.
T Consensus 209 ~~G~~v~~wTvn~~~~~~~l~~~GvdgIiTD~ 240 (252)
T 2pz0_A 209 KNGVKLFPWTVDRKEDMERMIKAGVDGIITDD 240 (252)
T ss_dssp HTTCEECCBCCCSHHHHHHHHHHTCSEEEESC
T ss_pred HCCCEEEEECCCCHHHHHHHHHcCCCEEEcCC
Confidence 4567899999 678899999999999999865
No 222
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=37.67 E-value=32 Score=25.43 Aligned_cols=66 Identities=21% Similarity=0.168 Sum_probs=37.9
Q ss_pred CCCeEEEeCCCCeeeehhhhhhccc-CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 132 QAENIVIDLPDWQVIPAENIVASFQ-GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q-~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
..+.++++..-.. ..--.++..+. .....++......+ ......+++.|+++.+.+|-+++++.+.
T Consensus 45 ~~dlvl~D~~l~~-~~g~~~~~~l~~~~~~~ii~~s~~~~-~~~~~~~~~~g~~~~l~Kp~~~~~l~~~ 111 (120)
T 2a9o_A 45 QPDIIILDLMLPE-IDGLEVAKTIRKTSSVPILMLSAKDS-EFDKVIGLELGADDYVTKPFSNRELQAR 111 (120)
T ss_dssp CCSEEEECSSCSS-SCHHHHHHHHHHHCCCCEEEEESCCS-HHHHHHHHHHTCSEEEESSCCHHHHHHH
T ss_pred CCCEEEEeccCCC-CCHHHHHHHHHhCCCCCEEEEecCCc-hHHHHHHHhCCHhheEeCCCCHHHHHHH
Confidence 4577777432111 11122333332 12345555554433 3445678899999999999999877543
No 223
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=37.56 E-value=79 Score=31.73 Aligned_cols=112 Identities=13% Similarity=0.076 Sum_probs=64.4
Q ss_pred chhHhHHHHHhCCcEEEEcCc--ch----hhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCC
Q 015764 59 SKQVMTAAVERGWNTFVFLSE--NQ----QLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQ 132 (401)
Q Consensus 59 ~K~~vt~AlEsG~~~~v~~~~--~~----~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~ 132 (401)
..+.+..++|.|+|.+.+... +. +..+.+.+.- | +.++. ...+.+.++...+.. ..
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~---~------------~~pvi-~~~v~t~~~a~~l~~--aG 317 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKY---P------------HLQVI-GGNVVTAAQAKNLID--AG 317 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHC---T------------TCEEE-EEEECSHHHHHHHHH--HT
T ss_pred hHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhC---C------------CCceE-ecccchHHHHHHHHH--cC
Confidence 467788899999999988432 11 2222222210 0 22221 125788887555443 25
Q ss_pred CCeEEEeCC-C----------Ce---eeehhhhhhcccCCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 133 AENIVIDLP-D----------WQ---VIPAENIVASFQGSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 133 ~~~vvv~~~-D----------W~---iIPlENliA~~q~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
++.+++... + |- ...++.+-+..+..+..|++ .+++..++..++ ..|+|+|.+-..
T Consensus 318 ad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~kal---a~GAd~V~iG~~ 389 (514)
T 1jcn_A 318 VDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKAL---ALGASTVMMGSL 389 (514)
T ss_dssp CSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHH---HTTCSEEEESTT
T ss_pred CCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHHHH---HcCCCeeeECHH
Confidence 888888320 1 22 22233333333333456888 788888887665 469999998774
No 224
>4hpe_A Putative cell WALL hydrolase TN916-like,CTN1-ORF1; two domains protein, SLT/lysozyme-like muramidase, NLPC/P60 endopeptidase; 2.38A {Clostridium difficile}
Probab=37.32 E-value=16 Score=35.18 Aligned_cols=31 Identities=26% Similarity=0.450 Sum_probs=23.7
Q ss_pred CceeeeeecCCCCEEEEEecC----CCcccceeee
Q 015764 365 EKAIPVTSLKVGDEVLLRVQG----AARHTGIEIQ 395 (401)
Q Consensus 365 g~~vsVt~LK~GD~VL~~~~~----~gRHfG~~I~ 395 (401)
+..|+..+|+|||-|...... ...|+||=+.
T Consensus 241 g~~v~~~~l~pGDLvff~~~~~~~~~~~HVgIy~G 275 (308)
T 4hpe_A 241 TQHLPLSQAKAGDLVFFHSTYNAGSYVTHVGIYVG 275 (308)
T ss_dssp SEEECGGGCCTTCEEEEECSSSCSSSEEEEEEECS
T ss_pred CeeechhhCCCCCEEEEcCCCCCCCCccEEEEEEc
Confidence 567888999999999887632 2349999774
No 225
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=36.48 E-value=2.5e+02 Score=25.70 Aligned_cols=112 Identities=13% Similarity=0.022 Sum_probs=63.6
Q ss_pred EEEEeCchhHhHHHHHhCCcEEEEc----Cc-----------chhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEe
Q 015764 53 VWIWTESKQVMTAAVERGWNTFVFL----SE-----------NQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEV 117 (401)
Q Consensus 53 vWiw~~~K~~vt~AlEsG~~~~v~~----~~-----------~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v 117 (401)
+..+-...+++.++.+.|++.+.+. .+ +.+..+++. +.-+.++-....+
T Consensus 24 ~i~~~~~~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~----------------~~~~~Pvi~~~~~ 87 (297)
T 2zbt_A 24 VIMDVTTPEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIM----------------AAVSIPVMAKVRI 87 (297)
T ss_dssp EEEEESSHHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHH----------------TTCSSCEEEEEET
T ss_pred eeeeechHHHHHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHH----------------HhcCCCeEEEecc
Confidence 4456667899999999999998652 11 111122111 1112333222334
Q ss_pred cChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccCC--CceEEEEcCCHHHHHHHHHHhhcccCeEEEe
Q 015764 118 STPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGS--GKTVFAISKTPSEAQIFLEALEQGLGGIVLK 189 (401)
Q Consensus 118 ~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~~--~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~ 189 (401)
.+.++.+.+.. ..++.+...+ + .++..++.++... ..-+.+.+.+++|++. +.+.|+|-|.++
T Consensus 88 ~~~~~~~~~~~--aGad~v~~~~-~---~~~~~~~~~~~~~~~~i~l~~~v~~~~~~~~---a~~~Gad~I~v~ 152 (297)
T 2zbt_A 88 GHFVEAMILEA--IGVDFIDESE-V---LTPADEEHHIDKWKFKVPFVCGARNLGEALR---RIAEGAAMIRTK 152 (297)
T ss_dssp TCHHHHHHHHH--TTCSEEEEET-T---SCCSCSSCCCCGGGCSSCEEEEESSHHHHHH---HHHTTCSEEEEC
T ss_pred CCHHHHHHHHH--CCCCEEeeeC-C---CChHHHHHHHHHhCCCceEEeecCCHHHHHH---HHHcCCCEEEEc
Confidence 45555444432 3577773322 1 2335555554432 3457777899999765 478999998776
No 226
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=36.44 E-value=46 Score=28.26 Aligned_cols=10 Identities=50% Similarity=0.776 Sum_probs=8.8
Q ss_pred CCCCCCCeee
Q 015764 266 NYIASRPFRV 275 (401)
Q Consensus 266 ~Yva~RPFRV 275 (401)
=|+|.+||||
T Consensus 7 r~~p~~p~rv 16 (318)
T 4ggc_A 7 RYIPSLPDRI 16 (318)
T ss_dssp CCCCSSCSEE
T ss_pred cccCCCCCEE
Confidence 3899999998
No 227
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=36.38 E-value=30 Score=26.10 Aligned_cols=67 Identities=12% Similarity=0.048 Sum_probs=40.5
Q ss_pred CCCeEEEeCCCCeeeehhhhhhccc----CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHH
Q 015764 132 QAENIVIDLPDWQVIPAENIVASFQ----GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKE 201 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q----~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l~~ 201 (401)
..+.++++..-.. ..--.++..+. .....++......++.. ..+++.|+++++.+|-+++++.+...
T Consensus 47 ~~dlii~D~~l~~-~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~--~~~~~~g~~~~l~KP~~~~~L~~~i~ 117 (127)
T 3i42_A 47 GYDAVFIDLNLPD-TSGLALVKQLRALPMEKTSKFVAVSGFAKNDL--GKEACELFDFYLEKPIDIASLEPILQ 117 (127)
T ss_dssp CCSEEEEESBCSS-SBHHHHHHHHHHSCCSSCCEEEEEECC-CTTC--CHHHHHHCSEEEESSCCHHHHHHHHH
T ss_pred CCCEEEEeCCCCC-CCHHHHHHHHHhhhccCCCCEEEEECCcchhH--HHHHHHhhHHheeCCCCHHHHHHHHH
Confidence 4677777543211 11122333332 33456777666655544 67889999999999999998765444
No 228
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=36.32 E-value=48 Score=25.36 Aligned_cols=38 Identities=18% Similarity=0.317 Sum_probs=26.8
Q ss_pred eEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 161 TVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 161 ~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
.++...... +......+++.|+++.+.+|-+++++.+.
T Consensus 85 ~ii~~s~~~-~~~~~~~~~~~ga~~~l~KP~~~~~L~~~ 122 (136)
T 1dcf_A 85 LLVALSGNT-DKSTKEKCMSFGLDGVLLKPVSLDNIRDV 122 (136)
T ss_dssp EEEEEESCC-SHHHHHHHHHTTCCEEEESSCCHHHHHHH
T ss_pred eEEEEeCCC-CHHHHHHHHHcCCCeEEECCCCHHHHHHH
Confidence 344444333 33455678899999999999999887643
No 229
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=36.16 E-value=66 Score=27.95 Aligned_cols=110 Identities=12% Similarity=0.074 Sum_probs=59.4
Q ss_pred chhHhHHHHHhCCcEEEEcCcc--------hhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhcccc
Q 015764 59 SKQVMTAAVERGWNTFVFLSEN--------QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPAD 130 (401)
Q Consensus 59 ~K~~vt~AlEsG~~~~v~~~~~--------~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~ 130 (401)
+.+.+..+++.|+|.+.+.... .+..+.+.+. + .|+.++ +.+.++++...+. .
T Consensus 77 ~~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~-------------~--~~~~v~--~~~~t~~e~~~~~--~ 137 (223)
T 1y0e_A 77 TSKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTH-------------A--PNVEIM--ADIATVEEAKNAA--R 137 (223)
T ss_dssp SHHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHH-------------C--TTSEEE--EECSSHHHHHHHH--H
T ss_pred cHHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHh-------------C--CCceEE--ecCCCHHHHHHHH--H
Confidence 4567888999999998875432 1222222221 0 033333 3677877755432 2
Q ss_pred CCCCeEEEeCCCCe--------eee-hhhhhhccc-CCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 131 GQAENIVIDLPDWQ--------VIP-AENIVASFQ-GSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 131 ~~~~~vvv~~~DW~--------iIP-lENliA~~q-~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
..++++.+.....+ .-| ++ ++.++. ..+..+++ .++|.++++.++ +.|+|||++-+.
T Consensus 138 ~G~d~i~~~~~g~t~~~~~~~~~~~~~~-~~~~~~~~~~ipvia~GGI~~~~~~~~~~---~~Gad~v~vG~a 206 (223)
T 1y0e_A 138 LGFDYIGTTLHGYTSYTQGQLLYQNDFQ-FLKDVLQSVDAKVIAEGNVITPDMYKRVM---DLGVHCSVVGGA 206 (223)
T ss_dssp TTCSEEECTTTTSSTTSTTCCTTHHHHH-HHHHHHHHCCSEEEEESSCCSHHHHHHHH---HTTCSEEEECHH
T ss_pred cCCCEEEeCCCcCcCCCCCCCCCcccHH-HHHHHHhhCCCCEEEecCCCCHHHHHHHH---HcCCCEEEEChH
Confidence 34787765321111 111 22 233221 12345666 456788777665 469999998754
No 230
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=36.15 E-value=52 Score=25.32 Aligned_cols=80 Identities=9% Similarity=0.134 Sum_probs=42.3
Q ss_pred ecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCC
Q 015764 117 VSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192 (401)
Q Consensus 117 v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d 192 (401)
..+.++.-..... ...+.++++..-.. ..--.++..+.. ....++...... +......+++.|+++++.+|-+
T Consensus 32 ~~~~~~a~~~~~~-~~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~~~~ii~~s~~~-~~~~~~~~~~~g~~~~l~KP~~ 108 (140)
T 3n53_A 32 SKNEKEALEQIDH-HHPDLVILDMDIIG-ENSPNLCLKLKRSKGLKNVPLILLFSSE-HKEAIVNGLHSGADDYLTKPFN 108 (140)
T ss_dssp ESSHHHHHHHHHH-HCCSEEEEETTC-------CHHHHHHTSTTCTTCCEEEEECC-----CTTTTTTCCCSEEEESSCC
T ss_pred eCCHHHHHHHHhc-CCCCEEEEeCCCCC-CcHHHHHHHHHcCcccCCCCEEEEecCC-CHHHHHHHHhcCCCeeeeCCCC
Confidence 4555443332222 24677777543111 111122333322 345566655543 3455677899999999999999
Q ss_pred HHHHHHH
Q 015764 193 VKAVLAL 199 (401)
Q Consensus 193 ~~ev~~l 199 (401)
++++.+.
T Consensus 109 ~~~l~~~ 115 (140)
T 3n53_A 109 RNDLLSR 115 (140)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887654
No 231
>3d79_A PUA domain, putative uncharacterized protein PH0734; unknown function; 1.73A {Pyrococcus horikoshii}
Probab=36.02 E-value=21 Score=31.58 Aligned_cols=54 Identities=22% Similarity=0.307 Sum_probs=41.0
Q ss_pred CeeeecCCceeE----EEecCCceeeeeeccCCCeEEEEcC-CCCeeEEeeeeEEEeccce
Q 015764 272 PFRVNAGPVHAY----VLVPGGKTCYLSELKSGKEVIVVDQ-KGRQRTAVVGRVKIESRPL 327 (401)
Q Consensus 272 PFRVNAGaVHaY----v~~pggkT~YLSEL~sG~eVLvVd~-~G~tR~~~VGRvKIE~RPL 327 (401)
-..|+.||+.+- =++|-|-+..=.+++.||.|.|++. +| +..-+|++..-..-|
T Consensus 96 ~v~vd~gA~~~l~~GasL~~~GV~~~~g~f~~Gd~V~v~~~~~g--~~iavG~~~~ss~e~ 154 (179)
T 3d79_A 96 RVVVDEGAVPHILNGADVMAPGIVDADEGIKEGDFVFVVEEKYG--RPLAIGIALMSGKVM 154 (179)
T ss_dssp EEEECGGGHHHHHTTCCEEGGGEEEECTTCCTTCEEEEEETTTC--CEEEEEEESSCHHHH
T ss_pred EEEECccHHHHHhCCCCcCCCcEEEccCCccCCCEEEEEECCCC--eEEEEEEEEcCHHHH
Confidence 367899988652 4556677887789999999999997 56 458899988765544
No 232
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=35.97 E-value=39 Score=26.13 Aligned_cols=41 Identities=17% Similarity=0.259 Sum_probs=28.8
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHH
Q 015764 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALK 200 (401)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l~ 200 (401)
...++...... +......+++.|++|.+.+|-+++++.+.-
T Consensus 81 ~~~ii~lt~~~-~~~~~~~~~~~ga~~~l~KP~~~~~L~~~l 121 (133)
T 2r25_B 81 TSPIVALTAFA-DDSNIKECLESGMNGFLSKPIKRPKLKTIL 121 (133)
T ss_dssp CSCEEEEESCC-SHHHHHHHHHTTCSEEEESSCCHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHcCCCEEEeCCCCHHHHHHHH
Confidence 34555544433 334567888999999999999998776543
No 233
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=35.63 E-value=47 Score=28.59 Aligned_cols=68 Identities=13% Similarity=0.201 Sum_probs=38.8
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccCC-CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHH
Q 015764 132 QAENIVIDLPDWQVIPAENIVASFQGS-GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKE 201 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~~-~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l~~ 201 (401)
..|.++++..-.. ..--.++..+... ...++......+ ......+++.|++|++.+|-+++++.+.-.
T Consensus 49 ~~dlvilD~~l~~-~~g~~~~~~lr~~~~~~ii~lt~~~~-~~~~~~~~~~Ga~~~l~Kp~~~~~L~~~i~ 117 (238)
T 2gwr_A 49 RPDLVLLDLMLPG-MNGIDVCRVLRADSGVPIVMLTAKTD-TVDVVLGLESGADDYIMKPFKPKELVARVR 117 (238)
T ss_dssp CCSEEEEESSCSS-SCHHHHHHHHHTTCCCCEEEEEETTC-CSCHHHHHHTTCCEEEEESCCHHHHHHHHH
T ss_pred CCCEEEEeCCCCC-CCHHHHHHHHHhCCCCcEEEEeCCCC-HHHHHHHHHCCCCEEEeCCCCHHHHHHHHH
Confidence 4677777543221 1112233333322 345555443332 234567789999999999999988765433
No 234
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=35.43 E-value=58 Score=27.02 Aligned_cols=81 Identities=12% Similarity=0.149 Sum_probs=44.9
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (401)
...+.++.-.... ....|.++++..-.. ..--.++..+. .....++......+ ......+++.|++|.+.+|-++
T Consensus 33 ~~~~~~~al~~~~-~~~~dlvl~D~~lp~-~~g~~~~~~l~~~~~~~~ii~ls~~~~-~~~~~~a~~~Ga~~~l~Kp~~~ 109 (208)
T 1yio_A 33 TFDCASTFLEHRR-PEQHGCLVLDMRMPG-MSGIELQEQLTAISDGIPIVFITAHGD-IPMTVRAMKAGAIEFLPKPFEE 109 (208)
T ss_dssp EESSHHHHHHHCC-TTSCEEEEEESCCSS-SCHHHHHHHHHHTTCCCCEEEEESCTT-SCCCHHHHHTTEEEEEESSCCH
T ss_pred EcCCHHHHHHhhh-ccCCCEEEEeCCCCC-CCHHHHHHHHHhcCCCCCEEEEeCCCC-HHHHHHHHHCCCcEEEeCCCCH
Confidence 3556555333322 224567777543222 11122333332 23455665554433 3455678899999999999999
Q ss_pred HHHHHH
Q 015764 194 KAVLAL 199 (401)
Q Consensus 194 ~ev~~l 199 (401)
.++.+.
T Consensus 110 ~~L~~~ 115 (208)
T 1yio_A 110 QALLDA 115 (208)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877543
No 235
>3zv0_C H/ACA ribonucleoprotein complex subunit 4; cell cycle, RNP assembly, X-linked dyskeratosis congenita; 2.80A {Saccharomyces cerevisiae}
Probab=35.39 E-value=34 Score=31.59 Aligned_cols=54 Identities=20% Similarity=0.294 Sum_probs=42.3
Q ss_pred eeeecCCceeEE----EecCCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEEecccee
Q 015764 273 FRVNAGPVHAYV----LVPGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLI 328 (401)
Q Consensus 273 FRVNAGaVHaYv----~~pggkT~YLSEL~sG~eVLvVd~~G~tR~~~VGRvKIE~RPLl 328 (401)
-.|+.||+.+.. ++|-|=+.+=.+++.||.|.|+|.+|+ .+-+|++..-..-|.
T Consensus 78 VvVD~GAv~Al~~GaSLl~pGV~~v~g~F~~GD~V~V~~~~G~--~IAvG~a~~sS~Ei~ 135 (195)
T 3zv0_C 78 IVVKDSAVNAVCYGAKLMIPGLLRYEEGIELYDEIVLITTKGE--AIAVAIAQMSTVDLA 135 (195)
T ss_dssp EEECHHHHHHHHTTCCEEGGGEEEEETTCCTTCEEEEECTTCC--EEEEEEESSCHHHHH
T ss_pred EEECHHHHHHHhcCCCccCCCcEecCCCcCCCCEEEEEcCCCC--EEEEEEEcCCHHHHh
Confidence 467888887642 556677888899999999999999986 577899887666553
No 236
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=35.14 E-value=44 Score=30.51 Aligned_cols=46 Identities=17% Similarity=0.292 Sum_probs=31.6
Q ss_pred hhhhhcccCCCc--eEEE-EcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 149 ENIVASFQGSGK--TVFA-ISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 149 ENliA~~q~~~~--~l~a-~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
+.++.+++..+- +|++ .+++.++++.+ ++.|+|||+ ||.|+.+.++
T Consensus 212 ~~~v~~~~~~Glg~~V~~WTvn~~~~~~~l---~~~GVDgIi--TD~P~~~~~~ 260 (285)
T 1xx1_A 212 EAIKSRDSANGFINKIYYWSVDKVSTTKAA---LDVGVDGIM--TNYPNVLIGV 260 (285)
T ss_dssp HHHHHHTSTTCCCCEEEEECCCSHHHHHHH---HHHTCSEEE--ESCHHHHHHH
T ss_pred HHHHHHHHhcCCCCeEEEeeCCCHHHHHHH---HhcCCCEEE--eCCHHHHHHH
Confidence 456666665444 5555 47888877765 578999998 7889876543
No 237
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=35.08 E-value=82 Score=27.73 Aligned_cols=97 Identities=9% Similarity=0.013 Sum_probs=53.3
Q ss_pred hhHhHHHHHhCCcEEEEcCcc---hhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeE
Q 015764 60 KQVMTAAVERGWNTFVFLSEN---QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENI 136 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~~---~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~v 136 (401)
-+.+..|++.|++.+-++..+ .+..+.+..+ .. .-| +..+ |. ++. .++... .++.+
T Consensus 16 ~~~~~~a~~~Gv~~v~lr~k~~~~~~~~~~i~~l---~~----------~~~--~~li--vn--d~~-~~A~~~-gadgv 74 (210)
T 3ceu_A 16 DKIITALFEEGLDILHLRKPETPAMYSERLLTLI---PE----------KYH--RRIV--TH--EHF-YLKEEF-NLMGI 74 (210)
T ss_dssp HHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHS---CG----------GGG--GGEE--ES--SCT-THHHHT-TCSEE
T ss_pred HHHHHHHHHCCCCEEEEccCCCCHHHHHHHHHHH---HH----------HhC--CeEE--Ee--CCH-HHHHHc-CCCEE
Confidence 378899999999999998543 2222222222 11 011 1122 22 121 222222 45667
Q ss_pred EEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEec
Q 015764 137 VIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKV 190 (401)
Q Consensus 137 vv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~ 190 (401)
-+...|.. ..+ + .+.-+...+.|.+|++.+ . .|+|-|.+.|
T Consensus 75 hl~~~~~~---~~~--~----~~~~ig~s~~t~~e~~~A---~-~GaDyv~~g~ 115 (210)
T 3ceu_A 75 HLNARNPS---EPH--D----YAGHVSCSCHSVEEVKNR---K-HFYDYVFMSP 115 (210)
T ss_dssp ECCSSSCS---CCT--T----CCSEEEEEECSHHHHHTT---G-GGSSEEEECC
T ss_pred EECccccc---ccc--c----cCCEEEEecCCHHHHHHH---h-hCCCEEEECC
Confidence 66544542 211 1 244677888999998766 3 6999998643
No 238
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=34.89 E-value=1.9e+02 Score=27.24 Aligned_cols=80 Identities=13% Similarity=0.160 Sum_probs=55.1
Q ss_pred eeEEEecCCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEEe--ccceeE-EEEEecCCCCeEEEEEeEecceEEEecC
Q 015764 281 HAYVLVPGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIE--SRPLIL-VEAKTNSGDQTLYGIILQNAETVALVSP 357 (401)
Q Consensus 281 HaYv~~pggkT~YLSEL~sG~eVLvVd~~G~tR~~~VGRvKIE--~RPLlL-VeAe~~~~~G~~~sviLQnAETIRLv~p 357 (401)
+.+-++++|+.-|.|. . .+++.++|+.-.. +++++++. .||+-. =|.+.. +|+.. +=.....+|..+.|
T Consensus 128 eG~glt~dg~~L~~Sd-G-s~~i~~iDp~T~~---v~~~I~V~~~g~~~~~lNELe~~--~G~ly-an~w~~~~I~vIDp 199 (262)
T 3nol_A 128 EGWGLTHNDQYLIMSD-G-TPVLRFLDPESLT---PVRTITVTAHGEELPELNELEWV--DGEIF-ANVWQTNKIVRIDP 199 (262)
T ss_dssp CCCCEEECSSCEEECC-S-SSEEEEECTTTCS---EEEEEECEETTEECCCEEEEEEE--TTEEE-EEETTSSEEEEECT
T ss_pred CceEEecCCCEEEEEC-C-CCeEEEEcCCCCe---EEEEEEeccCCccccccceeEEE--CCEEE-EEEccCCeEEEEEC
Confidence 7788889999999998 4 5889999986433 46677775 477543 355554 67755 33344568999998
Q ss_pred CCCCCCCCceeeeeec
Q 015764 358 CKGTGEQEKAIPVTSL 373 (401)
Q Consensus 358 ~~g~~~~g~~vsVt~L 373 (401)
.. |+.+..-++
T Consensus 200 ~t-----G~V~~~Id~ 210 (262)
T 3nol_A 200 ET-----GKVTGIIDL 210 (262)
T ss_dssp TT-----CBEEEEEEC
T ss_pred CC-----CcEEEEEEC
Confidence 73 566555444
No 239
>3p42_A Predicted protein; beta-grAsp, unknown function; HET: MSE; 1.91A {Escherichia coli O127}
Probab=34.60 E-value=25 Score=32.71 Aligned_cols=65 Identities=15% Similarity=0.160 Sum_probs=40.8
Q ss_pred CCCCCceEEEeccCceEEEEeecccc---CCCCCCC----------CeeeecCCceeEEEecCCceeeee---------e
Q 015764 239 LMRPGEGLLVGSFARGLFLVHSECLE---SNYIASR----------PFRVNAGPVHAYVLVPGGKTCYLS---------E 296 (401)
Q Consensus 239 ll~~GEGmLVGS~s~glFLVhsEt~e---s~Yva~R----------PFRVNAGaVHaYv~~pggkT~YLS---------E 296 (401)
+|+.|.=+.|-.... .+.|..|... -+|.+.+ .|. +|-.-++||.-|+|+..... +
T Consensus 114 ~L~~gd~L~iP~r~~-tV~V~G~V~~p~~v~~~~g~~~~dYi~~agg~~-~Ad~~~v~VI~~nG~v~~~~~a~Wn~~~~~ 191 (236)
T 3p42_A 114 PLVGDYTLYTVQRPV-TITLLGAVSGAGQLPWLAGRSVTDYLQDHPRLA-GADKNNVMVITPEGETVVAPVALWNKRHVE 191 (236)
T ss_dssp BCCEEEEEECCCCCS-EEEEEESBTTCEEEECCTTCCHHHHHTTSCBCT-TBCSSEEEEECTTSCEEEEECSSTTCCCEE
T ss_pred ccCCCCEEEECCCCC-EEEEEeecCCcCeEeecCCCCHHHHHHhCCCCC-CCCCccEEEEeCCCCEEeccccccccCCCC
Confidence 355555455554443 4556666421 0233333 355 67778889999999876654 7
Q ss_pred ccCCCeEEE
Q 015764 297 LKSGKEVIV 305 (401)
Q Consensus 297 L~sG~eVLv 305 (401)
+.+||+|+|
T Consensus 192 l~PG~~I~V 200 (236)
T 3p42_A 192 PPPGSQLWL 200 (236)
T ss_dssp CCTTCEEEE
T ss_pred CCCCCEEEE
Confidence 999998876
No 240
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=34.45 E-value=76 Score=24.01 Aligned_cols=81 Identities=12% Similarity=0.174 Sum_probs=44.2
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC---CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCC
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG---SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~---~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d 192 (401)
...+.++.-..... ...+.++++..-.. ..--.++..++. ....++..... .+......+++.|+++.+.+|-+
T Consensus 33 ~~~~~~~a~~~~~~-~~~dlvllD~~l~~-~~g~~~~~~l~~~~~~~~~ii~ls~~-~~~~~~~~~~~~ga~~~l~KP~~ 109 (130)
T 1dz3_A 33 TAYNGQDCLQMLEE-KRPDILLLDIIMPH-LDGLAVLERIRAGFEHQPNVIMLTAF-GQEDVTKKAVELGASYFILKPFD 109 (130)
T ss_dssp EESSHHHHHHHHHH-HCCSEEEEESCCSS-SCHHHHHHHHHHHCSSCCEEEEEEET-TCHHHHHHHHHTTCEEEEECSSC
T ss_pred EeCCHHHHHHHHhc-CCCCEEEEecCCCC-CCHHHHHHHHHhcCCCCCcEEEEecC-CCHHHHHHHHHcCCCEEEeCCCC
Confidence 34555543332222 24677888543211 111233333332 23445544433 33455678899999999999999
Q ss_pred HHHHHHH
Q 015764 193 VKAVLAL 199 (401)
Q Consensus 193 ~~ev~~l 199 (401)
++++.+.
T Consensus 110 ~~~l~~~ 116 (130)
T 1dz3_A 110 MENLAHH 116 (130)
T ss_dssp CTTHHHH
T ss_pred HHHHHHH
Confidence 8876543
No 241
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=34.37 E-value=32 Score=29.09 Aligned_cols=81 Identities=15% Similarity=0.181 Sum_probs=46.4
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (401)
...+.++.-.... ....|.++++..-... .--.++..+. .....++...... +......+++.|++|++.+|-++
T Consensus 36 ~~~~~~~a~~~~~-~~~~dlvllD~~l~~~-~g~~~~~~l~~~~~~~~ii~lt~~~-~~~~~~~~~~~ga~~~l~Kp~~~ 112 (233)
T 1ys7_A 36 TAVDGAEALRSAT-ENRPDAIVLDINMPVL-DGVSVVTALRAMDNDVPVCVLSARS-SVDDRVAGLEAGADDYLVKPFVL 112 (233)
T ss_dssp EESSHHHHHHHHH-HSCCSEEEEESSCSSS-CHHHHHHHHHHTTCCCCEEEEECCC-TTTCCCTTTTTTCSEEEESSCCH
T ss_pred EECCHHHHHHHHH-hCCCCEEEEeCCCCCC-CHHHHHHHHHhcCCCCCEEEEEcCC-CHHHHHHHHHcCCCEEEeCCCCH
Confidence 4556655333322 2356888886442221 1123333332 2345566555433 23445678999999999999999
Q ss_pred HHHHHH
Q 015764 194 KAVLAL 199 (401)
Q Consensus 194 ~ev~~l 199 (401)
+++.+.
T Consensus 113 ~~L~~~ 118 (233)
T 1ys7_A 113 AELVAR 118 (233)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877654
No 242
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=33.77 E-value=1.5e+02 Score=26.22 Aligned_cols=113 Identities=11% Similarity=0.078 Sum_probs=61.2
Q ss_pred CchhHhHHHHHhCCcEEEEc--Cc----c----hhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhc
Q 015764 58 ESKQVMTAAVERGWNTFVFL--SE----N----QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQ 127 (401)
Q Consensus 58 ~~K~~vt~AlEsG~~~~v~~--~~----~----~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~ 127 (401)
.-.+.+..+.+.|+|.+=+. .. + .+.++++.++. .....+-+-+.++++.-..+
T Consensus 20 ~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~----------------~~~~~v~lmv~d~~~~i~~~ 83 (228)
T 1h1y_A 20 NLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHT----------------KAYLDCHLMVTNPSDYVEPL 83 (228)
T ss_dssp GHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTC----------------CSEEEEEEESSCGGGGHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhc----------------CCcEEEEEEecCHHHHHHHH
Confidence 44678899999999975333 11 0 23444443331 12333444566665432233
Q ss_pred cccCCCCeEEEeCCCCeeeehhhhhhcccCCCceEEEEc--CCHHHHHHHHHHhhc--ccCeEEEec
Q 015764 128 PADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAIS--KTPSEAQIFLEALEQ--GLGGIVLKV 190 (401)
Q Consensus 128 ~~~~~~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v--~~~~eA~~al~~LE~--G~DGVvl~~ 190 (401)
.. ..++.+.+....-. -|++..+.++.+.+-++...+ ++..|+ ....++. |+|-|++.+
T Consensus 84 ~~-agad~v~vH~~~~~-~~~~~~~~~i~~~g~~igv~~~p~t~~e~--~~~~~~~~~~~d~vl~~s 146 (228)
T 1h1y_A 84 AK-AGASGFTFHIEVSR-DNWQELIQSIKAKGMRPGVSLRPGTPVEE--VFPLVEAENPVELVLVMT 146 (228)
T ss_dssp HH-HTCSEEEEEGGGCT-TTHHHHHHHHHHTTCEEEEEECTTSCGGG--GHHHHHSSSCCSEEEEES
T ss_pred HH-cCCCEEEECCCCcc-cHHHHHHHHHHHcCCCEEEEEeCCCCHHH--HHHHHhcCCCCCEEEEEe
Confidence 33 36788888765322 233455666655555666666 333333 2233444 999999844
No 243
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=33.64 E-value=26 Score=32.34 Aligned_cols=31 Identities=16% Similarity=-0.055 Sum_probs=26.8
Q ss_pred CCCcEEEEEe-CchhHhHHHHHhCCcEEEEcC
Q 015764 48 SKPKRVWIWT-ESKQVMTAAVERGWNTFVFLS 78 (401)
Q Consensus 48 ~~~K~vWiw~-~~K~~vt~AlEsG~~~~v~~~ 78 (401)
.+.+.|++|| .+++.+...++.|+|+|+.+.
T Consensus 239 ~~G~~v~~wTvn~~~~~~~l~~~GVdgIiTD~ 270 (287)
T 2oog_A 239 DLGFIVHPYTVNEKADMLRLNKYGVDGVFTNF 270 (287)
T ss_dssp HTTCEECCBCCCSHHHHHHHHHHTCSEEEESC
T ss_pred HCCCeEEEEeCCCHHHHHHHHHcCCCEEEeCC
Confidence 4567899999 679999999999999999865
No 244
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=33.22 E-value=48 Score=25.38 Aligned_cols=40 Identities=28% Similarity=0.337 Sum_probs=28.9
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecC-CHHHHHHH
Q 015764 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE-DVKAVLAL 199 (401)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~-d~~ev~~l 199 (401)
...++...... +......+++.|+++++.+|- +++++.+.
T Consensus 86 ~~~ii~ls~~~-~~~~~~~~~~~g~~~~l~kP~~~~~~l~~~ 126 (137)
T 2pln_A 86 SIVVLVSSDNP-TSEEEVHAFEQGADDYIAKPYRSIKALVAR 126 (137)
T ss_dssp TSEEEEEESSC-CHHHHHHHHHTTCSEEEESSCSCHHHHHHH
T ss_pred CccEEEEeCCC-CHHHHHHHHHcCCceeeeCCCCCHHHHHHH
Confidence 44555555443 345667889999999999999 99877644
No 245
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=32.90 E-value=27 Score=31.72 Aligned_cols=31 Identities=19% Similarity=0.268 Sum_probs=26.1
Q ss_pred CCCcEEEEEe-CchhHhHHHHHhCCcEEEEcC
Q 015764 48 SKPKRVWIWT-ESKQVMTAAVERGWNTFVFLS 78 (401)
Q Consensus 48 ~~~K~vWiw~-~~K~~vt~AlEsG~~~~v~~~ 78 (401)
.+...||+|| .+++.+...++.|+|+|+.+.
T Consensus 234 ~~Gl~v~~wTvn~~~~~~~l~~~GvdgIiTD~ 265 (272)
T 3ch0_A 234 KLGMRVIPWTVNTKEEIETLISLGVDGIITDY 265 (272)
T ss_dssp HTTCEECCBCCCSHHHHHHHHHHTCSEEEESC
T ss_pred HcCCEEEEeccCCHHHHHHHHHcCCCEEEeCC
Confidence 4566899999 578889999999999999865
No 246
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=32.89 E-value=86 Score=30.12 Aligned_cols=132 Identities=11% Similarity=0.163 Sum_probs=63.8
Q ss_pred CcEEEEEe--CchhHhHHHHHhCCcEEEEcCcch----hhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecCh---
Q 015764 50 PKRVWIWT--ESKQVMTAAVERGWNTFVFLSENQ----QLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTP--- 120 (401)
Q Consensus 50 ~K~vWiw~--~~K~~vt~AlEsG~~~~v~~~~~~----~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~--- 120 (401)
...-|++. .+.+.+..|..+|+|.++++-||. ++......+.. . +... +..+.. .++.|.+.
T Consensus 44 ~~Rs~L~vP~~~p~~~eka~~~gaD~vilDLEDaV~~~~k~~Ar~~l~~--~--l~~~---~~~~~~--~~VRVn~~~t~ 114 (316)
T 3qll_A 44 QTRSWLFTPATRSDRFAKAAENGADVAIIDLEDSVSQADKEQARQKAIS--Y--LSSR---PATSLP--LALRINGLDTR 114 (316)
T ss_dssp GCCEEEEEESCC----------CCSEEEEECSTTSCGGGHHHHHHHHHC----------------CC--EEEECCCTTSH
T ss_pred cccEEEECCCCCHHHHHHHhhCCCCEEEEeCCCCCCCcCHHHHHHHHHH--H--Hhcc---cccCCe--EEEEECCCCCc
Confidence 34568887 468889999999999999997763 22111111100 0 0000 011222 34556543
Q ss_pred ---hhhhhhccccCCCCeEEEeCCCCeeeehhh---hhhcccC--CCceEEEEcCCHHHHHHHHHHhh--cccCeEEEec
Q 015764 121 ---QELQQLQPADGQAENIVIDLPDWQVIPAEN---IVASFQG--SGKTVFAISKTPSEAQIFLEALE--QGLGGIVLKV 190 (401)
Q Consensus 121 ---e~~e~~~~~~~~~~~vvv~~~DW~iIPlEN---liA~~q~--~~~~l~a~v~~~~eA~~al~~LE--~G~DGVvl~~ 190 (401)
+|+..+.......+.+++ +++=-.|+ +.+.+.. .+..+++.+.|++=..-+-+++. -|+||+.+-+
T Consensus 115 ~~~~Dl~~~l~~g~~~~gIvl----PKvesa~~v~~~~~~l~~~~~~~~l~~~IET~~gv~~~~eIa~a~~~v~~l~~G~ 190 (316)
T 3qll_A 115 AGIEDIHALLECGSLPDYLVL----PKTESAAHLQILDRLMMFAGSDTRLIGIIESVRGLNAVESIAAATPKLAGLIFGA 190 (316)
T ss_dssp HHHHHHHHHHHSCCCCSEEEE----TTCCSHHHHHHHHHHTSCC--CCEEEEEECSHHHHHTHHHHHTSCTTEEEEEECH
T ss_pred hhHHHHHHHHhCCCCCCEEEe----CCCCCHHHHHHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHHHhcCCCceEEEECH
Confidence 234443322111255555 22222232 2333321 24679999999998888888887 3999999988
Q ss_pred CCHH
Q 015764 191 EDVK 194 (401)
Q Consensus 191 ~d~~ 194 (401)
.|..
T Consensus 191 ~DL~ 194 (316)
T 3qll_A 191 ADMA 194 (316)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8754
No 247
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=32.71 E-value=1.9e+02 Score=24.93 Aligned_cols=114 Identities=24% Similarity=0.223 Sum_probs=63.9
Q ss_pred hhHhHHHHHhCCcEEEEcCcchhhHhhccceeeeeeee-e-cCCccccCCCCeeEEEEEec-ChhhhhhhccccCCCCeE
Q 015764 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLF-I-KEGEVYDSGDRRVGSIIEVS-TPQELQQLQPADGQAENI 136 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~~~~~~~~~~~i~~i~~l~-~-~~g~~~~~~gk~v~~~~~v~-~~e~~e~~~~~~~~~~~v 136 (401)
.+++..+.+.|++.+.+.. .+..+++.+..-+ |+. . ..+ +++.+ . -+. +.++++.+.. ..++.+
T Consensus 26 ~~~a~~~~~~Ga~~i~~~~--~~~i~~i~~~~~~-pv~~~~~~~--~~~~~----~--~i~~~~~~i~~~~~--~Gad~v 92 (223)
T 1y0e_A 26 SKMALAAYEGGAVGIRANT--KEDILAIKETVDL-PVIGIVKRD--YDHSD----V--FITATSKEVDELIE--SQCEVI 92 (223)
T ss_dssp HHHHHHHHHHTCSEEEEES--HHHHHHHHHHCCS-CEEEECBCC--CTTCC----C--CBSCSHHHHHHHHH--HTCSEE
T ss_pred HHHHHHHHHCCCeeeccCC--HHHHHHHHHhcCC-CEEeeeccC--CCccc----c--ccCCcHHHHHHHHh--CCCCEE
Confidence 6788888999999987743 3444444332211 211 0 000 00001 1 122 3344444322 357888
Q ss_pred EEeCCCCee--eehhhhhhcccCC--CceEEEEcCCHHHHHHHHHHhhcccCeEEEe
Q 015764 137 VIDLPDWQV--IPAENIVASFQGS--GKTVFAISKTPSEAQIFLEALEQGLGGIVLK 189 (401)
Q Consensus 137 vv~~~DW~i--IPlENliA~~q~~--~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~ 189 (401)
.+....-.- -+++.++.++... +..++..+.+.+|++. +.+.|+|.|.+.
T Consensus 93 ~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t~~e~~~---~~~~G~d~i~~~ 146 (223)
T 1y0e_A 93 ALDATLQQRPKETLDELVSYIRTHAPNVEIMADIATVEEAKN---AARLGFDYIGTT 146 (223)
T ss_dssp EEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSSHHHHHH---HHHTTCSEEECT
T ss_pred EEeeecccCcccCHHHHHHHHHHhCCCceEEecCCCHHHHHH---HHHcCCCEEEeC
Confidence 886654211 2456666665543 5577889999999765 678999998764
No 248
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=32.34 E-value=30 Score=32.42 Aligned_cols=52 Identities=17% Similarity=0.279 Sum_probs=34.7
Q ss_pred CCeeeehhhhhhcccCCCceEEE-EcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 142 DWQVIPAENIVASFQGSGKTVFA-ISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 142 DW~iIPlENliA~~q~~~~~l~a-~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
+|..+. +.+|++++..+-+|++ .|++.++++.+ ++.|||||+ ||+|+.++++
T Consensus 252 ~~~~~~-~~~v~~~~~~Gl~V~~WTVn~~~~~~~l---~~~GVDgIi--TD~P~~~~~~ 304 (313)
T 3l12_A 252 YFLDVT-PELVAEAHDLGLIVLTWTVNEPEDIRRM---ATTGVDGIV--TDYPGRTQRI 304 (313)
T ss_dssp BGGGCC-HHHHHHHHHTTCEEEEBCCCSHHHHHHH---HHHTCSEEE--ESCHHHHHHH
T ss_pred chhcCC-HHHHHHHHHCCCEEEEEcCCCHHHHHHH---HHcCCCEEE--eCCHHHHHHH
Confidence 344443 4567766666666655 46777776655 578999998 7889876543
No 249
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=32.30 E-value=50 Score=33.67 Aligned_cols=145 Identities=17% Similarity=0.219 Sum_probs=63.4
Q ss_pred CCCCeEEEeCCCCeeeehhhhhhcccCC--CceEE-EEcCCHHHHHHHHHHhhcccCeEEEe----------------cC
Q 015764 131 GQAENIVIDLPDWQVIPAENIVASFQGS--GKTVF-AISKTPSEAQIFLEALEQGLGGIVLK----------------VE 191 (401)
Q Consensus 131 ~~~~~vvv~~~DW~iIPlENliA~~q~~--~~~l~-a~v~~~~eA~~al~~LE~G~DGVvl~----------------~~ 191 (401)
..++.++++..+..-..+.++|.++... +..|+ ..+.+.++|+.+. +.|+|+|++. ..
T Consensus 267 aGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~---~aGad~i~vg~g~gsi~~~~~~~g~g~p 343 (511)
T 3usb_A 267 ASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALI---EAGANVVKVGIGPGSICTTRVVAGVGVP 343 (511)
T ss_dssp TTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHH---HHTCSEEEECSSCSTTCCHHHHHCCCCC
T ss_pred hccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeeccHHHHHHHH---HhCCCEEEECCCCccccccccccCCCCC
Confidence 4689999987765444555666665432 23444 4888888887755 5699999972 22
Q ss_pred CHHHHHHHHHhhcccccccceeeeeEEEEEEEEEcCCcceEEEeecCCCC-CCceEEEeccCceEEEEeeccccC-CCCC
Q 015764 192 DVKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMR-PGEGLLVGSFARGLFLVHSECLES-NYIA 269 (401)
Q Consensus 192 d~~ev~~l~~~~~~~~~~~~~l~L~~atVt~V~~vGmGDRVCVDtcsll~-~GEGmLVGS~s~glFLVhsEt~es-~Yva 269 (401)
+...+.++.+.+... .+++ |-.=|+.+-- |..-.|. --.|..+|+ +|+-..|+-.. -|..
T Consensus 344 ~~~~l~~v~~~~~~~-----~iPV-------Ia~GGI~~~~--di~kala~GA~~V~vGs----~~~~~~es~g~~~~~~ 405 (511)
T 3usb_A 344 QLTAVYDCATEARKH-----GIPV-------IADGGIKYSG--DMVKALAAGAHVVMLGS----MFAGVAESPGETEIYQ 405 (511)
T ss_dssp HHHHHHHHHHHHHTT-----TCCE-------EEESCCCSHH--HHHHHHHTTCSEEEEST----TTTTBTTSSSCEEECS
T ss_pred cHHHHHHHHHHHHhC-----CCcE-------EEeCCCCCHH--HHHHHHHhCchhheecH----HHhcCccCchhhhhcc
Confidence 233444444433211 1111 1111332210 1111111 246788887 34434443211 1456
Q ss_pred CCCeeeecCCceeEEEecCCceeeeee
Q 015764 270 SRPFRVNAGPVHAYVLVPGGKTCYLSE 296 (401)
Q Consensus 270 ~RPFRVNAGaVHaYv~~pggkT~YLSE 296 (401)
-|.|...=|---.-.+.-|.+.||.++
T Consensus 406 g~~~k~~~gm~s~~a~~~~~~~r~~~~ 432 (511)
T 3usb_A 406 GRQFKVYRGMGSVGAMEKGSKDRYFQE 432 (511)
T ss_dssp SSEEEC---------------------
T ss_pred CeeeeeeeccccHHHHhcccccchhcc
Confidence 677776655444333345778888876
No 250
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=32.22 E-value=1e+02 Score=25.94 Aligned_cols=82 Identities=15% Similarity=0.108 Sum_probs=47.0
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC-CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHH
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG-SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVK 194 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~-~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ 194 (401)
...+.++.-..... ...|.++++..-... .--.++..+.. ....++...... +......+++.|++|++.+|-+++
T Consensus 33 ~~~~~~~al~~~~~-~~~dlvllD~~l~~~-~g~~~~~~l~~~~~~~ii~lt~~~-~~~~~~~~~~~ga~~~l~Kp~~~~ 109 (230)
T 2oqr_A 33 VVTDGPAALAEFDR-AGADIVLLDLMLPGM-SGTDVCKQLRARSSVPVIMVTARD-SEIDKVVGLELGADDYVTKPYSAR 109 (230)
T ss_dssp EECSHHHHHHHHHH-HCCSEEEEESSCSSS-CHHHHHHHHHHHCSCSEEEEECCH-HHHHHHHHHHHCCSCCCCSSCCHH
T ss_pred EECCHHHHHHHHhc-cCCCEEEEECCCCCC-CHHHHHHHHHcCCCCCEEEEeCCC-cHHHHHHHHHcCCCEEEeCCCCHH
Confidence 34555543332222 246778885432211 11123333221 245676666554 455677899999999999999998
Q ss_pred HHHHHH
Q 015764 195 AVLALK 200 (401)
Q Consensus 195 ev~~l~ 200 (401)
++.+.-
T Consensus 110 ~l~~~i 115 (230)
T 2oqr_A 110 ELIARI 115 (230)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776543
No 251
>2k50_A Replication factor A related protein; uncharacterized protein, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=32.18 E-value=77 Score=25.25 Aligned_cols=76 Identities=17% Similarity=0.229 Sum_probs=41.8
Q ss_pred CceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEEeccceeEEEEEecCCCCeEEEEEeEec-ceEEEecCCCCCCCCCce
Q 015764 289 GKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEAKTNSGDQTLYGIILQNA-ETVALVSPCKGTGEQEKA 367 (401)
Q Consensus 289 gkT~YLSEL~sG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLVeAe~~~~~G~~~sviLQnA-ETIRLv~p~~g~~~~g~~ 367 (401)
-...++++|+.|+.|- ++|+|+ +..+.--+..+.. ..++..++.|+|. -+|++.--+. ..
T Consensus 5 ~~~~~I~~L~~g~~v~-----------i~~~V~-~~~~~~~~~~k~G-~~~~~~~~~l~D~TG~I~~t~w~~------~~ 65 (115)
T 2k50_A 5 HRMDTISKLEEGAETP-----------VTGRVM-KISSPRTFTTRKG-REGKLANVIIADDTGELRAVFWTE------NI 65 (115)
T ss_dssp TCCCCTTTCCTTCEEE-----------EEEEEE-EECCCEECCCTTS-SCCEEEEEEEEETTEEEEEEEETT------GG
T ss_pred cceEEHHHCCCCCEeE-----------EEEEEE-ECCCceEEEcCCC-CEEEEEEEEEEeCCCeEEEEEeCc------hh
Confidence 3456799999887653 344444 2222222222210 0146678888885 3566654331 11
Q ss_pred eeeeecCCCCEEEEEe
Q 015764 368 IPVTSLKVGDEVLLRV 383 (401)
Q Consensus 368 vsVt~LK~GD~VL~~~ 383 (401)
-....|++||.|.+.=
T Consensus 66 ~~~~~l~~G~vv~i~g 81 (115)
T 2k50_A 66 KLLKKFREGDVIRIKD 81 (115)
T ss_dssp GGGGTCCTTSEEEEEE
T ss_pred hhhhcCCCCCEEEEEe
Confidence 1225799999999873
No 252
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=32.11 E-value=51 Score=25.07 Aligned_cols=65 Identities=12% Similarity=0.059 Sum_probs=38.1
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHH
Q 015764 132 QAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLA 198 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~ 198 (401)
..+.++++..-+. ..--.++..+.. .+..++...... +......+++.|+++.+.+|-+++++.+
T Consensus 46 ~~dlvllD~~~p~-~~g~~~~~~l~~~~~~~~~pii~~s~~~-~~~~~~~~~~~Ga~~~l~KP~~~~~L~~ 114 (122)
T 3gl9_A 46 TPDLIVLXIMMPV-MDGFTVLKKLQEKEEWKRIPVIVLTAKG-GEEDESLALSLGARKVMRKPFSPSQFIE 114 (122)
T ss_dssp CCSEEEECSCCSS-SCHHHHHHHHHTSTTTTTSCEEEEESCC-SHHHHHHHHHTTCSEEEESSCCHHHHHH
T ss_pred CCCEEEEeccCCC-CcHHHHHHHHHhcccccCCCEEEEecCC-chHHHHHHHhcChhhhccCCCCHHHHHH
Confidence 4566777432111 111234444422 234566555433 3345567899999999999999987754
No 253
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=31.80 E-value=75 Score=29.61 Aligned_cols=83 Identities=14% Similarity=0.162 Sum_probs=54.7
Q ss_pred EEEEEecChhhhhhhccccCCCCeEEEeCCCCeeeeh------hhhhhcccCCCceEEEEcCCHHHH---HHHHHHhhcc
Q 015764 112 GSIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIPA------ENIVASFQGSGKTVFAISKTPSEA---QIFLEALEQG 182 (401)
Q Consensus 112 ~~~~~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPl------ENliA~~q~~~~~l~a~v~~~~eA---~~al~~LE~G 182 (401)
-.|+.-.+++-++.+.. .+|+++++..|= +.|- +||.+. ...+..++..+++.+.. ...-.+++.|
T Consensus 10 ~L~vP~~~~~~~~ka~~---gaD~vilDlEDa-v~~~~k~~Ar~~l~~~-~~~~~~~~VRVn~~~~~~~~~dl~~~~~~g 84 (273)
T 1u5h_A 10 WLFCPADAPEAFAAAAA---AADVVILDLEDG-VAEAQKPAARNALRDT-PLDPERTVVRINAGGTADQARDLEALAGTA 84 (273)
T ss_dssp EEEEETTCGGGHHHHHH---HCSEEEEESSTT-SCGGGHHHHHHHHHHS-CCCTTSEEEECCCTTCHHHHHHHHHHHTSC
T ss_pred EEEeeCCCHHHHHHHHh---CCCEEEEECCCC-CCcCCHHHHHHHHHhc-CcCCCeEEEEECCCCchHHHHHHHHHHhcC
Confidence 35556666766666544 689999988763 2333 455544 43455799999987632 3344567889
Q ss_pred cCeEEEe-cCCHHHHHHH
Q 015764 183 LGGIVLK-VEDVKAVLAL 199 (401)
Q Consensus 183 ~DGVvl~-~~d~~ev~~l 199 (401)
+|||+|+ .+++++++.+
T Consensus 85 ~~gi~lPKv~s~~~v~~~ 102 (273)
T 1u5h_A 85 YTTVMLPKAESAAQVIEL 102 (273)
T ss_dssp CCEEEETTCCCHHHHHTT
T ss_pred CCEEEeCCCCCHHHHHHH
Confidence 9999996 4567777643
No 254
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=31.53 E-value=57 Score=29.93 Aligned_cols=128 Identities=13% Similarity=0.197 Sum_probs=66.3
Q ss_pred hhHhHHHHHhCCcEEEEcCcc-hhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEE
Q 015764 60 KQVMTAAVERGWNTFVFLSEN-QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVI 138 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~~-~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vvv 138 (401)
...+..+.+.|+|.+.|..+. -.... ++ + +.+++.|++++..+.-.+|. +.+.......|++++
T Consensus 70 ~~~i~~~~~aGAd~itvh~Ea~~~~~~---~~--i--------~~i~~~G~k~gv~lnp~tp~--~~~~~~l~~~D~Vlv 134 (231)
T 3ctl_A 70 QDYIAQLARAGADFITLHPETINGQAF---RL--I--------DEIRRHDMKVGLILNPETPV--EAMKYYIHKADKITV 134 (231)
T ss_dssp GGTHHHHHHHTCSEEEECGGGCTTTHH---HH--H--------HHHHHTTCEEEEEECTTCCG--GGGTTTGGGCSEEEE
T ss_pred HHHHHHHHHcCCCEEEECcccCCccHH---HH--H--------HHHHHcCCeEEEEEECCCcH--HHHHHHHhcCCEEEE
Confidence 335789999999999987653 11111 11 0 12234577777755444442 334444446788875
Q ss_pred eC-----CCCeeee--hhhh---hhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEe-c-----CC-H-HHHHH
Q 015764 139 DL-----PDWQVIP--AENI---VASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLK-V-----ED-V-KAVLA 198 (401)
Q Consensus 139 ~~-----~DW~iIP--lENl---iA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~-~-----~d-~-~ev~~ 198 (401)
-. .+-+.|| ++.| -+... +.+. .+.+-.-.. .+.+-.+.+.|+|+++.- + +| + +.+++
T Consensus 135 msV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~-~I~VdGGI~-~~~~~~~~~aGAd~~V~G~saif~~~d~~~~~~~~ 212 (231)
T 3ctl_A 135 MTVDPGFAGQPFIPEMLDKLAELKAWREREGLEY-EIEVDGSCN-QATYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 212 (231)
T ss_dssp ESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCC-EEEEESCCS-TTTHHHHHHHTCCEEEECTTTTGGGCSSHHHHHHH
T ss_pred eeeccCcCCccccHHHHHHHHHHHHHHhccCCCc-eEEEECCcC-HHHHHHHHHcCCCEEEEccHHHhCCCCcHHHHHHH
Confidence 22 2334454 3322 11111 1122 233322221 223445578899999998 3 36 5 45666
Q ss_pred HHHhhc
Q 015764 199 LKEYFD 204 (401)
Q Consensus 199 l~~~~~ 204 (401)
|++.+.
T Consensus 213 l~~~~~ 218 (231)
T 3ctl_A 213 MTAQIL 218 (231)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766553
No 255
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=31.43 E-value=16 Score=33.53 Aligned_cols=33 Identities=15% Similarity=0.037 Sum_probs=23.3
Q ss_pred cCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHH
Q 015764 166 SKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKE 201 (401)
Q Consensus 166 v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l~~ 201 (401)
+-+.++++.++ +.|+|||++...|++-++..++
T Consensus 76 vl~~d~~~~A~---~aGAd~v~~p~~d~~v~~~ar~ 108 (224)
T 1vhc_A 76 VLTAEQVVLAK---SSGADFVVTPGLNPKIVKLCQD 108 (224)
T ss_dssp CCSHHHHHHHH---HHTCSEEECSSCCHHHHHHHHH
T ss_pred EeeHHHHHHHH---HCCCCEEEECCCCHHHHHHHHH
Confidence 34667777655 5699999998888765554444
No 256
>1iq8_A Archaeosine tRNA-guanine transglycosylase; (alpha/beta)8 barrel, riken structural genomics/proteomics initiative, RSGI; 2.20A {Pyrococcus horikoshii} SCOP: b.122.1.1 c.1.20.1 d.17.6.1 PDB: 1it7_A* 1it8_A* 1j2b_A
Probab=31.40 E-value=22 Score=37.24 Aligned_cols=54 Identities=15% Similarity=0.111 Sum_probs=42.1
Q ss_pred CeeeecCCceeE----EEecCCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEEeccce
Q 015764 272 PFRVNAGPVHAY----VLVPGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPL 327 (401)
Q Consensus 272 PFRVNAGaVHaY----v~~pggkT~YLSEL~sG~eVLvVd~~G~tR~~~VGRvKIE~RPL 327 (401)
-..|+.||+.+- -++|.|=+..=.+.+.||.|.|+|.+|+ .+-+|++..-..-|
T Consensus 509 ~v~VD~gA~~av~~GasLl~~GV~~~~g~f~~Gd~V~V~~~~g~--~ia~G~a~~ss~ei 566 (582)
T 1iq8_A 509 RVVVNKEAEPFARKGKDVFAKFVIFADPGIRPYDEVLVVNENDE--LLATGQALLSGREM 566 (582)
T ss_dssp EEEECTTTHHHHHTTCCEEGGGEEEECTTCCTTCEEEEECTTCC--EEEEEEESSCHHHH
T ss_pred EEEECchHHHHHhcCCCcCCCceEecCCCcCCCCEEEEEeCCCC--EEEEEEEeeCHHHH
Confidence 378999988663 4567777888788999999999999885 48889888654433
No 257
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=31.15 E-value=76 Score=29.38 Aligned_cols=111 Identities=16% Similarity=0.045 Sum_probs=65.3
Q ss_pred chhHhHHHHHhCCcEEEEcCcc------hhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCC
Q 015764 59 SKQVMTAAVERGWNTFVFLSEN------QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQ 132 (401)
Q Consensus 59 ~K~~vt~AlEsG~~~~v~~~~~------~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~ 132 (401)
--++...+.+.|++++=+-.++ .+..+.+.+-.- -|+...| -|.++.+++++ . ...
T Consensus 67 p~~~A~~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~~v~-lPvl~kd---------------fI~d~~qi~~a-~-~~G 128 (254)
T 1vc4_A 67 PVEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREAVD-LPLLRKD---------------FVVDPFMLEEA-R-AFG 128 (254)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHHHCC-SCEEEES---------------CCCSHHHHHHH-H-HTT
T ss_pred HHHHHHHHHHcCCCEEEEecchhhhccCHHHHHHHHHhcC-CCEEECC---------------cCCCHHHHHHH-H-HcC
Confidence 3678888999999987663321 222222222100 1222221 15677666553 2 236
Q ss_pred CCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 133 AENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 133 ~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
+|.|++...+-+ =-++.++.....-+-..+.++++.+|++ .+++.|+|=|-+.+.
T Consensus 129 AD~VlL~~~~l~-~~l~~l~~~a~~lGl~~lvev~~~~E~~---~a~~~gad~IGvn~~ 183 (254)
T 1vc4_A 129 ASAALLIVALLG-ELTGAYLEEARRLGLEALVEVHTERELE---IALEAGAEVLGINNR 183 (254)
T ss_dssp CSEEEEEHHHHG-GGHHHHHHHHHHHTCEEEEEECSHHHHH---HHHHHTCSEEEEESB
T ss_pred CCEEEECccchH-HHHHHHHHHHHHCCCeEEEEECCHHHHH---HHHHcCCCEEEEccc
Confidence 888888665444 3466666532223457789999999987 566778888777654
No 258
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=31.04 E-value=83 Score=30.17 Aligned_cols=90 Identities=16% Similarity=0.242 Sum_probs=0.0
Q ss_pred CCCCCCeeeecCCceeEEEecCCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEEeccceeEEEEEecCCCCeEEEEEe
Q 015764 267 YIASRPFRVNAGPVHAYVLVPGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEAKTNSGDQTLYGIIL 346 (401)
Q Consensus 267 Yva~RPFRVNAGaVHaYv~~pggkT~YLSEL~sG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLVeAe~~~~~G~~~sviL 346 (401)
+..-|.|||+.-| +--.++|++|++|.+ + ++.+=.-+.+.=. .-++..|.=..+ +|.+ .++.
T Consensus 116 ~s~Gr~~~V~Vsp-----------~Vd~e~LkPG~rVaL-N-eSlaVVevLp~E~--~Gev~tv~E~l~--d~~R-~lV~ 177 (251)
T 3m9b_A 116 FTSGRKMRLTCSP-----------NIDAASLKKGQTVRL-N-EALTVVEAGTFEA--VGEISTLREILA--DGHR-ALVV 177 (251)
T ss_dssp ECSSSCCEECBCT-----------TSCTTTSCSSCEEEE-C-TTCCBCCCCCCCC--CSEEEEEEEECT--TSSE-EEEE
T ss_pred EeCCceEEEEeCC-----------CCCHHHCCCCCEEEe-C-CccEEEEecCCCC--cccEEEEEEEec--CCCE-EEEe
Q ss_pred EecceEEEecCCCCCCCCCceeeee-----------------ecCCCCEEEE
Q 015764 347 QNAETVALVSPCKGTGEQEKAIPVT-----------------SLKVGDEVLL 381 (401)
Q Consensus 347 QnAETIRLv~p~~g~~~~g~~vsVt-----------------~LK~GD~VL~ 381 (401)
=++..-|++.-. .++.-. .|+|||.||+
T Consensus 178 ~~~~eerVv~lA-------~~L~~~~~~~~~~~~~~~~~~~~~lr~GDsllv 222 (251)
T 3m9b_A 178 GHADEERVVWLA-------DPLIAEDLPDGLPEALNDDTRPRKLRPGDSLLV 222 (251)
T ss_dssp CSSSCEEEEECC-------GGGTCSCCCCCCCSSSCCCCSCCCCCTTCEEEE
T ss_pred cCCCceEEEEec-------hhhhccccccccccccccccccCCCCCCCEEEE
No 259
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=30.97 E-value=63 Score=30.99 Aligned_cols=51 Identities=16% Similarity=0.351 Sum_probs=38.1
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEe
Q 015764 132 QAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLK 189 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~ 189 (401)
+.+.+.+.+.+ |...++.++...+..++..+.+.++|+. +.+.|+|.|++.
T Consensus 122 g~~~V~~~~g~----~~~~~i~~~~~~g~~v~~~v~t~~~a~~---a~~~GaD~i~v~ 172 (369)
T 3bw2_A 122 PVPVVSFHFGV----PDREVIARLRRAGTLTLVTATTPEEARA---VEAAGADAVIAQ 172 (369)
T ss_dssp CCSEEEEESSC----CCHHHHHHHHHTTCEEEEEESSHHHHHH---HHHTTCSEEEEE
T ss_pred CCCEEEEeCCC----CcHHHHHHHHHCCCeEEEECCCHHHHHH---HHHcCCCEEEEe
Confidence 57888887654 3345666665556789999999998774 457899999994
No 260
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=30.89 E-value=1e+02 Score=27.58 Aligned_cols=112 Identities=13% Similarity=0.112 Sum_probs=56.4
Q ss_pred hHHHHHhCCcEEEEcCcc----hhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEE
Q 015764 63 MTAAVERGWNTFVFLSEN----QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVI 138 (401)
Q Consensus 63 vt~AlEsG~~~~v~~~~~----~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vvv 138 (401)
+..+.+.|+|.+++.... .+..+++-.. ....|.. .++.+.+.++++++... ..+++-+
T Consensus 75 ~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~-------------a~~~Gl~--~iv~v~~~~e~~~~~~~--~~~~i~~ 137 (219)
T 2h6r_A 75 AEAIKDCGCKGTLINHSEKRMLLADIEAVINK-------------CKNLGLE--TIVCTNNINTSKAVAAL--SPDCIAV 137 (219)
T ss_dssp HHHHHHHTCCEEEESBTTBCCBHHHHHHHHHH-------------HHHHTCE--EEEEESSSHHHHHHTTT--CCSEEEE
T ss_pred HHHHHHcCCCEEEECCccccCCHHHHHHHHHH-------------HHHCCCe--EEEEeCCchHHHHHHhC--CCCEEEE
Confidence 678899999999995310 1111111111 0111332 34456666655554432 2345545
Q ss_pred eCCCCe---------eee--hhhhhhcccCC--CceEEEE--cCCHHHHHHHHHHhhcccCeEEEe-----cCCHHH
Q 015764 139 DLPDWQ---------VIP--AENIVASFQGS--GKTVFAI--SKTPSEAQIFLEALEQGLGGIVLK-----VEDVKA 195 (401)
Q Consensus 139 ~~~DW~---------iIP--lENliA~~q~~--~~~l~a~--v~~~~eA~~al~~LE~G~DGVvl~-----~~d~~e 195 (401)
+. -|- -.| ++..++.+..- +..+++. +++.++++. ..+.|+||+++- ++|+.+
T Consensus 138 ~~-~~~iGtG~~~~t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~---~~~~gaDgvlVGsAi~~~~d~~~ 210 (219)
T 2h6r_A 138 EP-PELIGTGIPVSKANPEVVEGTVRAVKEINKDVKVLCGAGISKGEDVKA---ALDLGAEGVLLASGVVKAKNVEE 210 (219)
T ss_dssp CC-CC--------------CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHH---HHTTTCCCEEESHHHHTCSSHHH
T ss_pred Ee-ccccccCCCCccCCHHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHH---HhhCCCCEEEEcHHHhCcccHHH
Confidence 43 452 112 34444433221 3344443 466666665 467899999974 566654
No 261
>3h41_A NLP/P60 family protein; NLPC/P60 family protein, structural genomics, joint center F structural genomics, JCSG; HET: DGL PG4; 1.79A {Bacillus cereus atcc 10987}
Probab=30.88 E-value=15 Score=34.90 Aligned_cols=32 Identities=19% Similarity=0.302 Sum_probs=25.6
Q ss_pred CCceeeeeecCCCCEEEEEecC---CCcccceeee
Q 015764 364 QEKAIPVTSLKVGDEVLLRVQG---AARHTGIEIQ 395 (401)
Q Consensus 364 ~g~~vsVt~LK~GD~VL~~~~~---~gRHfG~~I~ 395 (401)
.|.+|+..+|+|||.|...... ...|+||=+.
T Consensus 241 ~g~~v~~~~~~pGDlvff~~~~~~~~~~HVgiy~G 275 (311)
T 3h41_A 241 NGVAVDKEHLQKGDLIFFAHDQGKGSVHHVAMYIG 275 (311)
T ss_dssp SSEEECGGGCCTTCEEEEEHHHHTSCEEEEEEEEE
T ss_pred CCEEEcHHHCCCCCEEEEecCCCCCCCcEEEEEEe
Confidence 3788999999999999988643 2359999884
No 262
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=30.65 E-value=1e+02 Score=25.01 Aligned_cols=104 Identities=10% Similarity=-0.031 Sum_probs=57.1
Q ss_pred hhHhHHHHHhCCcEEEEcCcchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEEe
Q 015764 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVID 139 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vvv~ 139 (401)
+.++....+.|.+-++++++..+..+.+.... ..|.. ..+...++++.++.+ ....++.+|+.
T Consensus 16 ~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~--------------~~~~~-~i~gd~~~~~~l~~a--~i~~ad~vi~~ 78 (153)
T 1id1_A 16 INTILQLNQRGQNVTVISNLPEDDIKQLEQRL--------------GDNAD-VIPGDSNDSSVLKKA--GIDRCRAILAL 78 (153)
T ss_dssp HHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH--------------CTTCE-EEESCTTSHHHHHHH--TTTTCSEEEEC
T ss_pred HHHHHHHHHCCCCEEEEECCChHHHHHHHHhh--------------cCCCe-EEEcCCCCHHHHHHc--ChhhCCEEEEe
Confidence 55666667789887777664333222222110 01111 122234455554443 24468888886
Q ss_pred CCCCeeeehhhhhhcc----cCCCceEEEEcCCHHHHHHHHHHhhcccCeEE
Q 015764 140 LPDWQVIPAENIVASF----QGSGKTVFAISKTPSEAQIFLEALEQGLGGIV 187 (401)
Q Consensus 140 ~~DW~iIPlENliA~~----q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVv 187 (401)
..|- -.|+.+.. .....++++.+++.+.++.+ -+.|+|-|+
T Consensus 79 ~~~d----~~n~~~~~~a~~~~~~~~ii~~~~~~~~~~~l---~~~G~~~vi 123 (153)
T 1id1_A 79 SDND----ADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKI---KMVHPDIIL 123 (153)
T ss_dssp SSCH----HHHHHHHHHHHHHTSSSCEEEECSSGGGHHHH---HTTCCSEEE
T ss_pred cCCh----HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHH---HHcCCCEEE
Confidence 5542 24443221 12346899999999988765 457999766
No 263
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=30.56 E-value=86 Score=31.72 Aligned_cols=65 Identities=12% Similarity=0.075 Sum_probs=40.0
Q ss_pred hhhhhhcccc-CCCCeEEEeCCCCeeeehhhhhhcccCC--CceEEEE-cCCHHHHHHHHHHhhcccCeEEE
Q 015764 121 QELQQLQPAD-GQAENIVIDLPDWQVIPAENIVASFQGS--GKTVFAI-SKTPSEAQIFLEALEQGLGGIVL 188 (401)
Q Consensus 121 e~~e~~~~~~-~~~~~vvv~~~DW~iIPlENliA~~q~~--~~~l~a~-v~~~~eA~~al~~LE~G~DGVvl 188 (401)
++++.+.... ..++.++++...-.--.+.++|.++... +..|++. +.+.++|+. +.+.|+|+|.+
T Consensus 229 ~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~---l~~aGaD~I~v 297 (490)
T 4avf_A 229 DTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNIATAEAAKA---LAEAGADAVKV 297 (490)
T ss_dssp THHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHH---HHHTTCSEEEE
T ss_pred chHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEeeeCcHHHHHH---HHHcCCCEEEE
Confidence 4444443332 3589999987654333444555554432 2355554 888888765 45689999998
No 264
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=30.54 E-value=55 Score=25.38 Aligned_cols=66 Identities=8% Similarity=0.112 Sum_probs=38.5
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 132 QAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
..+.++++..-.. ..--.++..+.. ....++..... .+......+++.|+++.+.+|-+++++.+.
T Consensus 48 ~~dlvl~D~~lp~-~~g~~~~~~lr~~~~~~~~pii~~t~~-~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~ 117 (136)
T 3t6k_A 48 LPDALICDVLLPG-IDGYTLCKRVRQHPLTKTLPILMLTAQ-GDISAKIAGFEAGANDYLAKPFEPQELVYR 117 (136)
T ss_dssp CCSEEEEESCCSS-SCHHHHHHHHHHSGGGTTCCEEEEECT-TCHHHHHHHHHHTCSEEEETTCCHHHHHHH
T ss_pred CCCEEEEeCCCCC-CCHHHHHHHHHcCCCcCCccEEEEecC-CCHHHHHHHHhcCcceEEeCCCCHHHHHHH
Confidence 4677777433211 111223333322 23345554443 344456788999999999999999877643
No 265
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=30.48 E-value=43 Score=29.26 Aligned_cols=102 Identities=15% Similarity=0.181 Sum_probs=57.5
Q ss_pred eeeEEEEEEEEEcCCcc-eEEEeecC-----CCCCCceEEEeccCceEEEEeeccccCCCCCCCCeee-----ecCCcee
Q 015764 214 SLMKATVTRVDVAGMGD-RVCVDLCS-----LMRPGEGLLVGSFARGLFLVHSECLESNYIASRPFRV-----NAGPVHA 282 (401)
Q Consensus 214 ~L~~atVt~V~~vGmGD-RVCVDtcs-----ll~~GEGmLVGS~s~glFLVhsEt~es~Yva~RPFRV-----NAGaVHa 282 (401)
...+++|++++.+.-+- ++.+..-. -+.||+=+.+- +... .....|||.+ +.|-+.=
T Consensus 10 ~~~~~~v~~~~~~t~~~~~~~l~~~~~~~~~~~~pGq~v~l~--------~~~~----g~~~~R~ysi~s~~~~~~~~~l 77 (243)
T 2eix_A 10 EYKKFMLREKQIINHNTRLFRFNLHHPEDVVGLPIGQHMSVK--------ATVD----GKEIYRPYTPVSSDDEKGYFDL 77 (243)
T ss_dssp SCEEEEEEEEEEEETTEEEEEEECSSTTCCCCCCTTCEEEEE--------EEET----TEEEEEEECCCSCTTCCSEEEE
T ss_pred ceEEEEEEEEEEeCCCeEEEEEEcCCCCcccCcCCceEEEEE--------EeeC----CCEEEeeeeecCCCCCCCEEEE
Confidence 45688999999887553 34444322 23555533221 1111 0112344443 2344555
Q ss_pred EEEe-c-CCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEEeccceeEEEE
Q 015764 283 YVLV-P-GGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEA 332 (401)
Q Consensus 283 Yv~~-p-ggkT~YLSEL~sG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLVeA 332 (401)
++.. | |.-|+||+.|+.||+|.+....|+...- .-..+|++||=+
T Consensus 78 ~vk~~~~G~~S~~l~~l~~Gd~v~v~gP~G~f~~~-----~~~~~~~vliag 124 (243)
T 2eix_A 78 IIKVYEKGQMSQYIDHLNPGDFLQVRGPKGQFDYK-----PNMVKEMGMIAG 124 (243)
T ss_dssp EEECCTTCHHHHHHHTCCTTCEEEEEEEECSCCCC-----TTSSSEEEEEEE
T ss_pred EEEEcCCCCcchHhhcCCCCCEEEEECCeEEEEeC-----CCCCcEEEEEec
Confidence 5555 3 4479999999999999998877763211 001467777754
No 266
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=30.19 E-value=2.2e+02 Score=27.36 Aligned_cols=73 Identities=14% Similarity=0.167 Sum_probs=50.3
Q ss_pred CCCCeEEEeCCCC----------eeeehhhhhhcc-------cCCCceEEEEcCCHH-----HH-HHHHHHhhcccCeEE
Q 015764 131 GQAENIVIDLPDW----------QVIPAENIVASF-------QGSGKTVFAISKTPS-----EA-QIFLEALEQGLGGIV 187 (401)
Q Consensus 131 ~~~~~vvv~~~DW----------~iIPlENliA~~-------q~~~~~l~a~v~~~~-----eA-~~al~~LE~G~DGVv 187 (401)
..+.-|-|+...| +++|.|..++.+ .+.+.-|+|...... || +-+.--.|.|+|+|.
T Consensus 110 aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldeai~Ra~ay~~AGAD~if 189 (298)
T 3eoo_A 110 AGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIF 189 (298)
T ss_dssp TTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred hCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHHHHHHHhhHhcCCCEEE
Confidence 3466788888777 489999766654 234567888777652 22 333445678999999
Q ss_pred Eec-CCHHHHHHHHHhh
Q 015764 188 LKV-EDVKAVLALKEYF 203 (401)
Q Consensus 188 l~~-~d~~ev~~l~~~~ 203 (401)
+.. .|+++++++.+.+
T Consensus 190 ~~~~~~~ee~~~~~~~~ 206 (298)
T 3eoo_A 190 PEAMKTLDDYRRFKEAV 206 (298)
T ss_dssp ECCCCSHHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHc
Confidence 974 4789998887765
No 267
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=29.41 E-value=1.9e+02 Score=22.04 Aligned_cols=64 Identities=13% Similarity=0.096 Sum_probs=38.7
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccCC--CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 132 QAENIVIDLPDWQVIPAENIVASFQGS--GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~~--~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
..+.++++..-.. ..--.++..+... ...|+......+ ....+++.|+++++.+|-+++++.+.
T Consensus 55 ~~dlvi~d~~l~~-~~g~~~~~~l~~~~~~~~ii~~s~~~~---~~~~~~~~g~~~~l~KP~~~~~l~~~ 120 (143)
T 2qv0_A 55 KVDAIFLDINIPS-LDGVLLAQNISQFAHKPFIVFITAWKE---HAVEAFELEAFDYILKPYQESRIINM 120 (143)
T ss_dssp CCSEEEECSSCSS-SCHHHHHHHHTTSTTCCEEEEEESCCT---THHHHHHTTCSEEEESSCCHHHHHHH
T ss_pred CCCEEEEecCCCC-CCHHHHHHHHHccCCCceEEEEeCCHH---HHHHHHhCCcceEEeCCCCHHHHHHH
Confidence 4677777433221 2222344444332 334665555533 35678899999999999999887654
No 268
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=29.32 E-value=75 Score=27.42 Aligned_cols=105 Identities=13% Similarity=0.167 Sum_probs=60.4
Q ss_pred hhHhHHHHHhCCcEEEEcCcchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEEe
Q 015764 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVID 139 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vvv~ 139 (401)
..+.....+.|.+-++++.+ .+.++++.+-. |.. ..+...++++.++.+. ...++.+|+.
T Consensus 13 ~~la~~L~~~g~~v~vid~~-~~~~~~l~~~~----------------~~~-~i~gd~~~~~~l~~a~--i~~ad~vi~~ 72 (218)
T 3l4b_C 13 YYLARSMLSRKYGVVIINKD-RELCEEFAKKL----------------KAT-IIHGDGSHKEILRDAE--VSKNDVVVIL 72 (218)
T ss_dssp HHHHHHHHHTTCCEEEEESC-HHHHHHHHHHS----------------SSE-EEESCTTSHHHHHHHT--CCTTCEEEEC
T ss_pred HHHHHHHHhCCCeEEEEECC-HHHHHHHHHHc----------------CCe-EEEcCCCCHHHHHhcC--cccCCEEEEe
Confidence 34555666788887777654 44554433210 000 1222344555554432 3467888886
Q ss_pred CCCCeeeehhhhhhcc----cCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 140 LPDWQVIPAENIVASF----QGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 140 ~~DW~iIPlENliA~~----q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
..+- .+|+++.. .....++++.+++.+.++.+ .+.|+|-|+....
T Consensus 73 ~~~d----~~n~~~~~~a~~~~~~~~iia~~~~~~~~~~l---~~~G~d~vi~p~~ 121 (218)
T 3l4b_C 73 TPRD----EVNLFIAQLVMKDFGVKRVVSLVNDPGNMEIF---KKMGITTVLNLTT 121 (218)
T ss_dssp CSCH----HHHHHHHHHHHHTSCCCEEEECCCSGGGHHHH---HHHTCEECCCHHH
T ss_pred cCCc----HHHHHHHHHHHHHcCCCeEEEEEeCcchHHHH---HHCCCCEEECHHH
Confidence 5553 34543322 13456899999999998876 4569998775443
No 269
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=28.98 E-value=1.2e+02 Score=25.15 Aligned_cols=38 Identities=11% Similarity=0.198 Sum_probs=27.9
Q ss_pred eEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 161 TVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 161 ~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
.++..... .+......+++.|+++++.+|-+++++...
T Consensus 87 pii~lt~~-~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~ 124 (205)
T 1s8n_A 87 PIVVLTAF-SQRDLVERARDAGAMAYLVKPFSISDLIPA 124 (205)
T ss_dssp CEEEEEEG-GGHHHHHTTGGGSCEEEEEESCCHHHHHHH
T ss_pred CEEEEecC-CCHHHHHHHHhcCCcEEEeCCCCHHHHHHH
Confidence 45544433 345667789999999999999998877543
No 270
>3pbi_A Invasion protein; peptidoglycan hydrolase, extracellular, invasion related Pro cell WALL, NLPC-like module, hydrolase; 1.60A {Mycobacterium tuberculosis} PDB: 3i86_A
Probab=28.41 E-value=24 Score=32.57 Aligned_cols=30 Identities=20% Similarity=0.418 Sum_probs=23.0
Q ss_pred CceeeeeecCCCCEEEEEecCCCcccceeee
Q 015764 365 EKAIPVTSLKVGDEVLLRVQGAARHTGIEIQ 395 (401)
Q Consensus 365 g~~vsVt~LK~GD~VL~~~~~~gRHfG~~I~ 395 (401)
++.|+..+|||||-|+... ....|+||=|.
T Consensus 151 g~~V~~~~lqpGDLVff~~-g~~~HVgIYlG 180 (214)
T 3pbi_A 151 GRHVPPAEAKRGDLIFYGP-GGGQHVTLYLG 180 (214)
T ss_dssp SEEECGGGCCTTCEEEESG-GGCSEEEEEEE
T ss_pred CeeechhhCCCCCEEEecC-CCCCEEEEEec
Confidence 5678889999999887642 33579999874
No 271
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=28.30 E-value=2.4e+02 Score=23.34 Aligned_cols=21 Identities=14% Similarity=0.335 Sum_probs=16.0
Q ss_pred CCceeeeee-ccCCCeEEEEcC
Q 015764 288 GGKTCYLSE-LKSGKEVIVVDQ 308 (401)
Q Consensus 288 ggkT~YLSE-L~sG~eVLvVd~ 308 (401)
.|-..+-+- |++||+++.||.
T Consensus 44 ~~spA~~aG~l~~GD~I~~vng 65 (196)
T 3gsl_A 44 PGGAAAQDGRLRVNDSILFVNE 65 (196)
T ss_dssp TTSHHHHHCCCCTTCEEEEETT
T ss_pred CCChHHhcCCCCCCCEEEEECC
Confidence 344556666 999999999984
No 272
>1q5x_A Regulator of RNAse E activity A; 3-layer sandwich, alpha-beta structure, parallel beta sheet, antiparallel beta sheet, hydrolase inhibitor; 2.00A {Escherichia coli} SCOP: c.8.7.1
Probab=28.06 E-value=14 Score=32.44 Aligned_cols=28 Identities=36% Similarity=0.452 Sum_probs=24.0
Q ss_pred eeeeeccCCCeEEEEcCCCCeeEEeeeeE
Q 015764 292 CYLSELKSGKEVIVVDQKGRQRTAVVGRV 320 (401)
Q Consensus 292 ~YLSEL~sG~eVLvVd~~G~tR~~~VGRv 320 (401)
.+|.++..|| ||++|..|..+.++.|-.
T Consensus 50 ~al~~~~~G~-VlVvd~~g~~~~a~~G~~ 77 (161)
T 1q5x_A 50 DLLEQNGRGR-VLVVDGGGSVRRALVDAE 77 (161)
T ss_dssp HHHTSCCTTE-EEEEECTTCSSSEEECHH
T ss_pred HHHhhcCCCC-EEEEECCCCCCceeehHH
Confidence 5788888887 999999999999998854
No 273
>3ne0_A Resuscitation promoting factor interacting protei; cell WALL, peptidoglycan, hydrolase; 1.00A {Mycobacterium tuberculosis} PDB: 3pbc_A 3s0q_A 2xiv_A*
Probab=27.72 E-value=27 Score=32.36 Aligned_cols=30 Identities=20% Similarity=0.469 Sum_probs=23.0
Q ss_pred CceeeeeecCCCCEEEEEecCCCcccceeee
Q 015764 365 EKAIPVTSLKVGDEVLLRVQGAARHTGIEIQ 395 (401)
Q Consensus 365 g~~vsVt~LK~GD~VL~~~~~~gRHfG~~I~ 395 (401)
++.|+..+|||||-|... .....|+||-|.
T Consensus 151 g~~V~~~~lqpGDLvFf~-~g~~~HVgIYlG 180 (214)
T 3ne0_A 151 GRKIPSSQMRRGDVIFYG-PNGSQHVTIYLG 180 (214)
T ss_dssp SEEEEGGGCCTTCEEEES-GGGCSEEEEEEE
T ss_pred CceechhhCCCCCEEEec-CCCCCEEEEEeC
Confidence 567888999999998764 233479999874
No 274
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=27.41 E-value=14 Score=33.43 Aligned_cols=40 Identities=18% Similarity=0.349 Sum_probs=29.9
Q ss_pred cCC-ceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEEeccceeEEEE
Q 015764 287 PGG-KTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEA 332 (401)
Q Consensus 287 pgg-kT~YLSEL~sG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLVeA 332 (401)
++| -|+||.+|+.||+|.+-...|+.... -..+|++||=+
T Consensus 124 ~~G~~S~~l~~l~~Gd~v~v~gP~G~f~~~------~~~~~~vliag 164 (290)
T 2r6h_A 124 KPGISSSYIFSLKPGDKVMMSGPYGDFHIQ------DTDAEMLYIGG 164 (290)
T ss_dssp CCCHHHHHHTTCCTTCEEEEEEEECCCCCC------SSSCEEEEEEE
T ss_pred CCcchhhHHhcCCCCCEEEEEecccCCcCC------CCCCeEEEEEC
Confidence 344 58999999999999998888876421 13578888754
No 275
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=27.40 E-value=57 Score=24.22 Aligned_cols=66 Identities=15% Similarity=0.082 Sum_probs=36.3
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 132 QAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
..+.++++..-.. ..--.++..+.. ....++..... .+......+++.|+++.+.+|-+++++.+.
T Consensus 45 ~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~~~~ii~~s~~-~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 114 (124)
T 1mb3_A 45 KPDLILMDIQLPE-ISGLEVTKWLKEDDDLAHIPVVAVTAF-AMKGDEERIREGGCEAYISKPISVVHFLET 114 (124)
T ss_dssp CCSEEEEESBCSS-SBHHHHHHHHHHSTTTTTSCEEEEC-------CHHHHHHHTCSEEECSSCCHHHHHHH
T ss_pred CCCEEEEeCCCCC-CCHHHHHHHHHcCccccCCcEEEEECC-CCHHHHHHHHhCCCCEEEeCCCCHHHHHHH
Confidence 4577777433211 112234444332 23456555443 334455678899999999999999887643
No 276
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=27.39 E-value=1.8e+02 Score=21.17 Aligned_cols=63 Identities=6% Similarity=0.079 Sum_probs=38.2
Q ss_pred CCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHH
Q 015764 132 QAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLA 198 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~ 198 (401)
..+.++++..-.. ..--.++..+. .....++......+.. ..+++.|+++.+.+|-+++++.+
T Consensus 45 ~~dlvl~D~~l~~-~~g~~~~~~l~~~~~~~~ii~~s~~~~~~---~~~~~~g~~~~l~Kp~~~~~l~~ 109 (116)
T 3a10_A 45 NYDLVILDIEMPG-ISGLEVAGEIRKKKKDAKIILLTAYSHYR---SDMSSWAADEYVVKSFNFDELKE 109 (116)
T ss_dssp CCSEEEECSCCSS-SCHHHHHHHHHHHCTTCCEEEEESCGGGG---GCGGGGGSSEEEECCSSTHHHHH
T ss_pred CCCEEEEECCCCC-CCHHHHHHHHHccCCCCeEEEEECCcchH---HHHHhccccceEECCCCHHHHHH
Confidence 4677777433111 12223333332 2345676666655443 67889999999999999887653
No 277
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=27.33 E-value=2.7e+02 Score=26.64 Aligned_cols=90 Identities=14% Similarity=0.116 Sum_probs=48.7
Q ss_pred EEEEecChhhhhhhccccCCCCeEEEeCCCCeeee------hhhhhhcccC---CCceEEEEcCCHHH---HHHHHHHhh
Q 015764 113 SIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIP------AENIVASFQG---SGKTVFAISKTPSE---AQIFLEALE 180 (401)
Q Consensus 113 ~~~~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIP------lENliA~~q~---~~~~l~a~v~~~~e---A~~al~~LE 180 (401)
.|+.=.+++-++.+.. ..+|++|++..|= +.| .+|+.+.++. ....++..+++.+- ..-...+|.
T Consensus 49 L~vP~~~p~~~eka~~--~gaD~vilDLEDa-V~~~~k~~Ar~~l~~~l~~~~~~~~~~~VRVn~~~t~~~~~Dl~~~l~ 125 (316)
T 3qll_A 49 LFTPATRSDRFAKAAE--NGADVAIIDLEDS-VSQADKEQARQKAISYLSSRPATSLPLALRINGLDTRAGIEDIHALLE 125 (316)
T ss_dssp EEEESCC------------CCSEEEEECSTT-SCGGGHHHHHHHHHC---------CCEEEECCCTTSHHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHhh--CCCCEEEEeCCCC-CCCcCHHHHHHHHHHHHhcccccCCeEEEEECCCCCchhHHHHHHHHh
Confidence 3444444544444332 3688999987763 333 2355554433 23578999988652 122335667
Q ss_pred ccc--CeEEEe-cCCHHHHHHHHHhhcc
Q 015764 181 QGL--GGIVLK-VEDVKAVLALKEYFDG 205 (401)
Q Consensus 181 ~G~--DGVvl~-~~d~~ev~~l~~~~~~ 205 (401)
.|. |||+|+ .++++++..+.+.+..
T Consensus 126 ~g~~~~gIvlPKvesa~~v~~~~~~l~~ 153 (316)
T 3qll_A 126 CGSLPDYLVLPKTESAAHLQILDRLMMF 153 (316)
T ss_dssp SCCCCSEEEETTCCSHHHHHHHHHHTSC
T ss_pred CCCCCCEEEeCCCCCHHHHHHHHHHHHh
Confidence 775 999997 5678999888887743
No 278
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=27.22 E-value=97 Score=23.40 Aligned_cols=66 Identities=14% Similarity=0.073 Sum_probs=38.5
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC--CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 015764 132 QAENIVIDLPDWQVIPAENIVASFQG--SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (401)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~--~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l 199 (401)
..+.++++..-.. ..--.++..+.. ....++......+ ......+++.|+++.+.+|-+++++...
T Consensus 47 ~~dlvl~D~~l~~-~~g~~~~~~l~~~~~~~~ii~~s~~~~-~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 114 (136)
T 1mvo_A 47 KPDLIVLDVMLPK-LDGIEVCKQLRQQKLMFPILMLTAKDE-EFDKVLGLELGADDYMTKPFSPREVNAR 114 (136)
T ss_dssp CCSEEEEESSCSS-SCHHHHHHHHHHTTCCCCEEEEECTTC-CCCHHHHHHTTCCEEEESSCCHHHHHHH
T ss_pred CCCEEEEecCCCC-CCHHHHHHHHHcCCCCCCEEEEECCCC-HHHHHHHHhCCCCEEEECCCCHHHHHHH
Confidence 4577777543221 122234444332 2345555544333 2345567899999999999999877544
No 279
>2jmz_A Hypothetical protein MJ0781; unknown function; NMR {Methanocaldococcus jannaschii} PDB: 2jnq_A
Probab=27.17 E-value=74 Score=27.80 Aligned_cols=33 Identities=12% Similarity=0.143 Sum_probs=22.4
Q ss_pred ecCCceeEEEecCCc--eeeeeeccCCCeEEEEcC
Q 015764 276 NAGPVHAYVLVPGGK--TCYLSELKSGKEVIVVDQ 308 (401)
Q Consensus 276 NAGaVHaYv~~pggk--T~YLSEL~sG~eVLvVd~ 308 (401)
-+=|=|.+...-+|+ ....+||+.||.|++.+.
T Consensus 98 ~~T~~Hp~~v~~~g~~~w~~A~eLk~GD~v~~~~~ 132 (186)
T 2jmz_A 98 TLTHDHPVYISKTGEVLEINAEMVKVGDYIYIPKN 132 (186)
T ss_dssp CBCTTCEEEEEETTEEEEEEGGGCCTTSEEEEECS
T ss_pred EEeCCCEEEEeCCCeEEEEEhhcCCCCCEEEeccc
Confidence 333445544444444 678899999999999763
No 280
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=27.12 E-value=68 Score=31.73 Aligned_cols=109 Identities=13% Similarity=0.061 Sum_probs=58.6
Q ss_pred CchhHhHHHHHhCCcEEEEcCcc-hhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecC-hhhhhhhcccc-CCCC
Q 015764 58 ESKQVMTAAVERGWNTFVFLSEN-QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVST-PQELQQLQPAD-GQAE 134 (401)
Q Consensus 58 ~~K~~vt~AlEsG~~~~v~~~~~-~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~-~e~~e~~~~~~-~~~~ 134 (401)
-+.++..++-+.|.-++|-.... .+.+++..+..+ .+++ .+.. +...+.+.... ..++
T Consensus 54 te~~lA~A~a~~Gg~gvi~~~~s~ee~~~~i~~~~~-----------------~~~~--~~g~~~~~~e~~~~a~~aGvd 114 (361)
T 3r2g_A 54 TESNMANFMHSKGAMGALHRFMTIEENIQEFKKCKG-----------------PVFV--SVGCTENELQRAEALRDAGAD 114 (361)
T ss_dssp CSHHHHHHHHHTTCEEBCCSCSCHHHHHHHHHTCCS-----------------CCBE--EECSSHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHhhcce-----------------EEEE--EcCCCHHHHHHHHHHHHcCCC
Confidence 45778888888887666643211 233333333321 1222 2322 23333332222 3578
Q ss_pred eEEEeCC-CCeeeehhhhhhcccCC--CceEEE-EcCCHHHHHHHHHHhhcccCeEEEe
Q 015764 135 NIVIDLP-DWQVIPAENIVASFQGS--GKTVFA-ISKTPSEAQIFLEALEQGLGGIVLK 189 (401)
Q Consensus 135 ~vvv~~~-DW~iIPlENliA~~q~~--~~~l~a-~v~~~~eA~~al~~LE~G~DGVvl~ 189 (401)
.+.++.. ++. -.+.++|+.+... +..|++ .+.++++|+.+ .+.|+|+|.+.
T Consensus 115 vI~id~a~G~~-~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a---~~aGaD~I~Vg 169 (361)
T 3r2g_A 115 FFCVDVAHAHA-KYVGKTLKSLRQLLGSRCIMAGNVATYAGADYL---ASCGADIIKAG 169 (361)
T ss_dssp EEEEECSCCSS-HHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHH---HHTTCSEEEEC
T ss_pred EEEEeCCCCCc-HhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHH---HHcCCCEEEEc
Confidence 8888643 221 1122344444332 457888 69999998765 47799999983
No 281
>2wnv_C C1Q chain C, complement C1Q subcomponent subunit C; immune system, secreted, collagen, recognition, disulfide bond, innate immunity; HET: NAG; 1.25A {Homo sapiens} PDB: 2jg8_C 2wnu_C* 2jg9_C* 1pk6_C
Probab=26.97 E-value=27 Score=29.05 Aligned_cols=20 Identities=35% Similarity=0.408 Sum_probs=16.4
Q ss_pred eeeeeecCCCCEEEEEecCC
Q 015764 367 AIPVTSLKVGDEVLLRVQGA 386 (401)
Q Consensus 367 ~vsVt~LK~GD~VL~~~~~~ 386 (401)
--.+.+|++||+|-+++..+
T Consensus 91 ~~~~L~L~~GD~V~v~~~~~ 110 (131)
T 2wnv_C 91 GGVLLRLQVGEEVWLAVNDY 110 (131)
T ss_dssp EEEEEEECTTCEEEEEEEEE
T ss_pred eeEEEEECCCCEEEEEEeCC
Confidence 34588999999999999654
No 282
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=26.48 E-value=1.8e+02 Score=27.59 Aligned_cols=14 Identities=14% Similarity=0.067 Sum_probs=11.5
Q ss_pred HhHHHHHhCCcEEE
Q 015764 62 VMTAAVERGWNTFV 75 (401)
Q Consensus 62 ~vt~AlEsG~~~~v 75 (401)
.+..|++.|+|.+=
T Consensus 113 ~ve~a~~~GAdaV~ 126 (304)
T 1to3_A 113 NAQAVKRDGAKALK 126 (304)
T ss_dssp CHHHHHHTTCCEEE
T ss_pred hHHHHHHcCCCEEE
Confidence 37889999999764
No 283
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=26.44 E-value=74 Score=28.66 Aligned_cols=31 Identities=16% Similarity=0.118 Sum_probs=26.6
Q ss_pred CCCcEEEEEeC-----chhHhHHHHHhCCcEEEEcC
Q 015764 48 SKPKRVWIWTE-----SKQVMTAAVERGWNTFVFLS 78 (401)
Q Consensus 48 ~~~K~vWiw~~-----~K~~vt~AlEsG~~~~v~~~ 78 (401)
.+.+.||+||- +++.+...++.|+|+|+.+.
T Consensus 210 ~~G~~v~~wTv~~~~n~~~~~~~l~~~GvdgI~TD~ 245 (258)
T 2o55_A 210 EKGLSVTVWMPWIFDDSEEDWKKCLELQVDLICSNY 245 (258)
T ss_dssp HTTCEEEEECCTTCCCCHHHHHHHHHHTCSEEEESC
T ss_pred HCCCEEEEeeCCCCCCCHHHHHHHHHcCCCEEEeCC
Confidence 45678999996 68899999999999999865
No 284
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=26.43 E-value=2.6e+02 Score=23.13 Aligned_cols=108 Identities=13% Similarity=0.147 Sum_probs=57.8
Q ss_pred hhHhHHHHHh-CCcEEEEcCcchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEE
Q 015764 60 KQVMTAAVER-GWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVI 138 (401)
Q Consensus 60 K~~vt~AlEs-G~~~~v~~~~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vvv 138 (401)
..+.....+. |.+-++++.+ .+..+.+... |-. ..+...++++.++.+. ...+++.+|+
T Consensus 52 ~~~a~~L~~~~g~~V~vid~~-~~~~~~~~~~-----------------g~~-~~~gd~~~~~~l~~~~-~~~~ad~vi~ 111 (183)
T 3c85_A 52 TGAYDELRARYGKISLGIEIR-EEAAQQHRSE-----------------GRN-VISGDATDPDFWERIL-DTGHVKLVLL 111 (183)
T ss_dssp HHHHHHHHHHHCSCEEEEESC-HHHHHHHHHT-----------------TCC-EEECCTTCHHHHHTBC-SCCCCCEEEE
T ss_pred HHHHHHHHhccCCeEEEEECC-HHHHHHHHHC-----------------CCC-EEEcCCCCHHHHHhcc-CCCCCCEEEE
Confidence 4556666677 9987777654 4444433322 111 1111233444433320 1346788888
Q ss_pred eCCCC-eeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 139 DLPDW-QVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 139 ~~~DW-~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
...+. ..+.+-.++.. .+...++++.+++.+.++.+ .+.|+|-|+....
T Consensus 112 ~~~~~~~~~~~~~~~~~-~~~~~~ii~~~~~~~~~~~l---~~~G~~~vi~p~~ 161 (183)
T 3c85_A 112 AMPHHQGNQTALEQLQR-RNYKGQIAAIAEYPDQLEGL---LESGVDAAFNIYS 161 (183)
T ss_dssp CCSSHHHHHHHHHHHHH-TTCCSEEEEEESSHHHHHHH---HHHTCSEEEEHHH
T ss_pred eCCChHHHHHHHHHHHH-HCCCCEEEEEECCHHHHHHH---HHcCCCEEEchHH
Confidence 55442 22222222222 23456899999998887743 3569998766444
No 285
>2wnv_B C1Q chain B, complement C1Q subcomponent subunit B; immune system, secreted, collagen, recognition, disulfide bond, innate immunity; HET: NAG; 1.25A {Homo sapiens} PDB: 2jg8_B 2wnu_B* 2jg9_B* 1pk6_B
Probab=26.42 E-value=29 Score=29.15 Aligned_cols=19 Identities=26% Similarity=0.350 Sum_probs=16.1
Q ss_pred eeeeecCCCCEEEEEecCC
Q 015764 368 IPVTSLKVGDEVLLRVQGA 386 (401)
Q Consensus 368 vsVt~LK~GD~VL~~~~~~ 386 (401)
-.+.+|++||+|-+++..+
T Consensus 94 ~~~L~L~~GD~V~v~~~~~ 112 (136)
T 2wnv_B 94 GMVLKLEQGENVFLQATDK 112 (136)
T ss_dssp EEEEEECTTCEEEEEEEEE
T ss_pred eEEEEECCCCEEEEEEeCC
Confidence 4688999999999999754
No 286
>4f3j_A Complement C1Q tumor necrosis factor-related PROT; late-onset retinal macular degeneration, L-ORMD, L-ORD, AMD, related macular degeneration; 1.34A {Homo sapiens}
Probab=26.31 E-value=2.4e+02 Score=23.60 Aligned_cols=51 Identities=22% Similarity=0.144 Sum_probs=34.3
Q ss_pred eEEEEEEEEEcCCcceEEEeecCCCCCCceE-EEeccC----ceEEEEeeccccCCCCCC
Q 015764 216 MKATVTRVDVAGMGDRVCVDLCSLMRPGEGL-LVGSFA----RGLFLVHSECLESNYIAS 270 (401)
Q Consensus 216 ~~atVt~V~~vGmGDRVCVDtcsll~~GEGm-LVGS~s----~glFLVhsEt~es~Yva~ 270 (401)
..+....|-.+=-||+|+|-. ..|.+- +.++.. =.-||++.+...+||.+-
T Consensus 88 ~~~s~s~il~L~~GD~V~v~~----~~~~~~~~~~~~~~~s~FsGfLl~~D~~~~~~~~~ 143 (148)
T 4f3j_A 88 ASLSGGAMVRLEPEDQVWVQV----GVGDYIGIYASIKTDSTFSGFLVYSDWHSSPVFAH 143 (148)
T ss_dssp EEEEEEEEEEECTTCEEEEEC----CSTTCEEEECBTTBCCEEEEEEEEESCCSSTTTCC
T ss_pred ceEeeEEEEEcCCCCEEEEEE----EcCCCceEEcCCCCCeEEEEEEEeecCCCCceEEe
Confidence 344556677888999999974 233332 334321 256899999999998764
No 287
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A*
Probab=25.89 E-value=21 Score=32.95 Aligned_cols=42 Identities=21% Similarity=0.355 Sum_probs=29.0
Q ss_pred CC-ceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEEeccceeEEEE
Q 015764 288 GG-KTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEA 332 (401)
Q Consensus 288 gg-kT~YLSEL~sG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLVeA 332 (401)
+| -|+||.+|+.||+|.+-...|+.-... .. -..+|++||=+
T Consensus 131 ~G~~S~~L~~l~~Gd~v~v~gP~G~~~~~~--~~-~~~~~~vlIag 173 (314)
T 2rc5_A 131 KGVCSNYMCDLKPGDEVTMTGPSGKKFLLP--NT-DFSGDIMFLAT 173 (314)
T ss_dssp BCHHHHHHHTCCTTCEEEEEEEECSSSCCC--SS-CBCSCEEEEEE
T ss_pred CcchHHHHhcCCCcCEEEEEeccCCceeCC--CC-CCCCCEEEEEC
Confidence 45 699999999999999987777542110 00 12578888855
No 288
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=25.61 E-value=22 Score=32.14 Aligned_cols=79 Identities=11% Similarity=0.003 Sum_probs=40.8
Q ss_pred EEecChhhhhhhcccc--CCCCeEEEeCCCCeee-ehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 115 IEVSTPQELQQLQPAD--GQAENIVIDLPDWQVI-PAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 115 ~~v~~~e~~e~~~~~~--~~~~~vvv~~~DW~iI-PlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
+...++++...++..+ +..+.+-+..++..-. -++.+-.++. .-..-...+-+.++++.++ +.|+|||++...
T Consensus 22 ~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~-~~~vgagtvi~~d~~~~A~---~aGAd~v~~p~~ 97 (214)
T 1wbh_A 22 IVVKKLEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVP-EAIVGAGTVLNPQQLAEVT---EAGAQFAISPGL 97 (214)
T ss_dssp ECCSSGGGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCT-TSEEEEESCCSHHHHHHHH---HHTCSCEEESSC
T ss_pred EECCCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHCc-CCEEeeCEEEEHHHHHHHH---HcCCCEEEcCCC
Confidence 3445555544433322 4467777765543211 1122223332 1111223355667777655 569999999877
Q ss_pred CHHHHH
Q 015764 192 DVKAVL 197 (401)
Q Consensus 192 d~~ev~ 197 (401)
|++-+.
T Consensus 98 d~~v~~ 103 (214)
T 1wbh_A 98 TEPLLK 103 (214)
T ss_dssp CHHHHH
T ss_pred CHHHHH
Confidence 776443
No 289
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=25.32 E-value=1.2e+02 Score=27.88 Aligned_cols=41 Identities=22% Similarity=0.383 Sum_probs=28.5
Q ss_pred CCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEEeccceeEEEE
Q 015764 288 GGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEA 332 (401)
Q Consensus 288 ggkT~YLSEL~sG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLVeA 332 (401)
|.-|+||.+|+.||+|.+-...|+.-... .-..+|++||=+
T Consensus 126 G~~S~~L~~l~~Gd~v~v~gP~G~~~~~~----~~~~~~~vlIag 166 (310)
T 3vo2_A 126 GVCSNFLCDLKPGADVKITGPVGKEMLMP----KDPNATVIMLAT 166 (310)
T ss_dssp CHHHHHHHTCCTTCEEEEEEEECSTTCCB----SCTTCEEEEEEE
T ss_pred cchhhHHhcCCCCCEEEEEeccCCcccCC----CCCCCCEEEEeC
Confidence 66899999999999999977666531110 012477887754
No 290
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=25.16 E-value=69 Score=23.04 Aligned_cols=76 Identities=12% Similarity=0.053 Sum_probs=43.2
Q ss_pred ecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCC
Q 015764 117 VSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192 (401)
Q Consensus 117 v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d 192 (401)
..+.++....... ...+.++++..-.. ..-..++..+.. ....++......+.. .+++.|+++++.+|-+
T Consensus 31 ~~~~~~~~~~l~~-~~~dlii~d~~~~~-~~~~~~~~~l~~~~~~~~~~ii~~~~~~~~~----~~~~~g~~~~l~kp~~ 104 (119)
T 2j48_A 31 LVDGSTALDQLDL-LQPIVILMAWPPPD-QSCLLLLQHLREHQADPHPPLVLFLGEPPVD----PLLTAQASAILSKPLD 104 (119)
T ss_dssp ESCHHHHHHHHHH-HCCSEEEEECSTTC-CTHHHHHHHHHHTCCCSSCCCEEEESSCCSS----HHHHHHCSEECSSCST
T ss_pred ecCHHHHHHHHHh-cCCCEEEEecCCCC-CCHHHHHHHHHhccccCCCCEEEEeCCCCch----hhhhcCHHHhccCCCC
Confidence 4555543333222 24677777543221 222234444432 345566655554433 8889999999999998
Q ss_pred HHHHHH
Q 015764 193 VKAVLA 198 (401)
Q Consensus 193 ~~ev~~ 198 (401)
++++.+
T Consensus 105 ~~~l~~ 110 (119)
T 2j48_A 105 PQLLLT 110 (119)
T ss_dssp THHHHH
T ss_pred HHHHHH
Confidence 887653
No 291
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=25.05 E-value=30 Score=34.32 Aligned_cols=61 Identities=18% Similarity=0.254 Sum_probs=37.7
Q ss_pred CCCCCCCCeeeec------CCceeEEEe-----c--------CCceeeeeeccCCCeEEEEc-CCCCeeEEeeeeEEEec
Q 015764 265 SNYIASRPFRVNA------GPVHAYVLV-----P--------GGKTCYLSELKSGKEVIVVD-QKGRQRTAVVGRVKIES 324 (401)
Q Consensus 265 s~Yva~RPFRVNA------GaVHaYv~~-----p--------ggkT~YLSEL~sG~eVLvVd-~~G~tR~~~VGRvKIE~ 324 (401)
.|...+|||-+-- |-+|=.|.+ | |.-|.||++|+.||.|.+-- ..|.-+.- .-..
T Consensus 205 lp~l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~~G~~S~~L~~l~~Gd~v~v~~~~~g~F~lp-----~~~~ 279 (435)
T 1f20_A 205 LSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRIQADDVVPCFVRGAPSFHLP-----RNPQ 279 (435)
T ss_dssp SCBCCCEEEECCSCTTTSTTEEEEEEECCEEECGGGTSCEEECHHHHHHTTCCTTCEEEEEEECCTTSSCC-----SCTT
T ss_pred CCCCCCccccccCCcccCCCeEEEEEEEEEEecCCCCCcccCCccchhHhhCCCCCEEEEEEecCCCccCC-----CCCC
Confidence 3455667776532 445555543 3 44599999999999999866 44454211 0024
Q ss_pred cceeEE
Q 015764 325 RPLILV 330 (401)
Q Consensus 325 RPLlLV 330 (401)
+|++||
T Consensus 280 ~piilI 285 (435)
T 1f20_A 280 VPCILV 285 (435)
T ss_dssp SCEEEE
T ss_pred CCEEEE
Confidence 788877
No 292
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=24.99 E-value=1.3e+02 Score=29.53 Aligned_cols=101 Identities=10% Similarity=0.039 Sum_probs=62.5
Q ss_pred hhHhHHHHHhCCcEEEEcCcchhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEEe
Q 015764 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVID 139 (401)
Q Consensus 60 K~~vt~AlEsG~~~~v~~~~~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~~~~~~~~~vvv~ 139 (401)
..+.....+.|.+-++++.+ .+.++.+.+.+ -. .++...++++-++.+- ..+++.+|+.
T Consensus 17 ~~va~~L~~~g~~vvvId~d-~~~v~~~~~~g-----------------~~-vi~GDat~~~~L~~ag--i~~A~~viv~ 75 (413)
T 3l9w_A 17 QITGRLLLSSGVKMVVLDHD-PDHIETLRKFG-----------------MK-VFYGDATRMDLLESAG--AAKAEVLINA 75 (413)
T ss_dssp HHHHHHHHHTTCCEEEEECC-HHHHHHHHHTT-----------------CC-CEESCTTCHHHHHHTT--TTTCSEEEEC
T ss_pred HHHHHHHHHCCCCEEEEECC-HHHHHHHHhCC-----------------Ce-EEEcCCCCHHHHHhcC--CCccCEEEEC
Confidence 45566666789998787764 45555444321 11 1333455666555442 3468888886
Q ss_pred CCCCeeeehhhhhhc----ccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEE
Q 015764 140 LPDWQVIPAENIVAS----FQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVL 188 (401)
Q Consensus 140 ~~DW~iIPlENliA~----~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl 188 (401)
..| +-.|+... -.+.+.+|++.+++.+.+... .+.|+|-|+-
T Consensus 76 ~~~----~~~n~~i~~~ar~~~p~~~Iiara~~~~~~~~L---~~~Gad~Vi~ 121 (413)
T 3l9w_A 76 IDD----PQTNLQLTEMVKEHFPHLQIIARARDVDHYIRL---RQAGVEKPER 121 (413)
T ss_dssp CSS----HHHHHHHHHHHHHHCTTCEEEEEESSHHHHHHH---HHTTCSSCEE
T ss_pred CCC----hHHHHHHHHHHHHhCCCCeEEEEECCHHHHHHH---HHCCCCEEEC
Confidence 665 34454322 223456899999999998876 4689998874
No 293
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=24.84 E-value=57 Score=24.96 Aligned_cols=81 Identities=9% Similarity=0.097 Sum_probs=45.3
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc----CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecC
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ----GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE 191 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q----~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (401)
...+.++....... ...+.++++..-.. ..--.++..+. .....++...... +......+++.|+++++.+|-
T Consensus 36 ~~~~~~~a~~~l~~-~~~dlii~d~~l~~-~~g~~~~~~l~~~~~~~~~pii~~s~~~-~~~~~~~~~~~g~~~~l~kp~ 112 (142)
T 3cg4_A 36 SADSGGQCIDLLKK-GFSGVVLLDIMMPG-MDGWDTIRAILDNSLEQGIAIVMLTAKN-APDAKMIGLQEYVVDYITKPF 112 (142)
T ss_dssp EESSHHHHHHHHHT-CCCEEEEEESCCSS-SCHHHHHHHHHHTTCCTTEEEEEEECTT-CCCCSSTTGGGGEEEEEESSC
T ss_pred EeCCHHHHHHHHHh-cCCCEEEEeCCCCC-CCHHHHHHHHHhhcccCCCCEEEEECCC-CHHHHHHHHhcCccEEEeCCC
Confidence 34555543332222 23567777543221 22223344432 2345666655443 334556788999999999999
Q ss_pred CHHHHHHH
Q 015764 192 DVKAVLAL 199 (401)
Q Consensus 192 d~~ev~~l 199 (401)
+++++.+.
T Consensus 113 ~~~~l~~~ 120 (142)
T 3cg4_A 113 DNEDLIEK 120 (142)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 99877644
No 294
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=24.29 E-value=1.2e+02 Score=28.74 Aligned_cols=105 Identities=15% Similarity=0.093 Sum_probs=58.8
Q ss_pred eeeEEEEEEEEEcCCcc-eEEEeec-----CCCCCCceEEEeccCceEEEEeeccccCCCCCCCCeeee----cCCceeE
Q 015764 214 SLMKATVTRVDVAGMGD-RVCVDLC-----SLMRPGEGLLVGSFARGLFLVHSECLESNYIASRPFRVN----AGPVHAY 283 (401)
Q Consensus 214 ~L~~atVt~V~~vGmGD-RVCVDtc-----sll~~GEGmLVGS~s~glFLVhsEt~es~Yva~RPFRVN----AGaVHaY 283 (401)
...+++|++++.+.-.= ++.+..- .-+.||+=+-| .-.....+|...|||-+- .|-+.=.
T Consensus 151 ~~~~~~V~~~~~~s~~i~~~~l~~~~~~~~~~~~pGQ~v~l----------~~~~~~~~~~~~R~YSi~s~p~~~~~~i~ 220 (396)
T 1gvh_A 151 GTRDFRIVAKTPRSALITSFELEPVDGGAVAEYRPGQYLGV----------WLKPEGFPHQEIRQYSLTRKPDGKGYRIA 220 (396)
T ss_dssp SEEEEEEEEEEECSSSEEEEEEEETTCCCCCCCCTTCEEEE----------EECCTTCSSCEEEEEECCSCCCSSCEEEE
T ss_pred CcEEEEEEEEEEcCCCeEEEEEEeCCCCcCCCCCCCCeEEE----------EecCCCCccceeecceeccCCCCCeEEEE
Confidence 45789999999886322 2222221 12455543322 211001123334555543 2444445
Q ss_pred EEec--CCceeeeee-ccCCCeEEEEcCCCCeeEEeeeeEEEeccceeEEEEE
Q 015764 284 VLVP--GGKTCYLSE-LKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEAK 333 (401)
Q Consensus 284 v~~p--ggkT~YLSE-L~sG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLVeAe 333 (401)
|..- |.-|+||.+ |+.||+|.+-...|.-.. -+ -..+|++||=+-
T Consensus 221 Vk~~~~G~~S~~L~~~l~~Gd~v~v~gP~G~f~l---~~--~~~~~~vlIagG 268 (396)
T 1gvh_A 221 VKREEGGQVSNWLHNHANVGDVVKLVAPAGDFFM---AV--ADDTPVTLISAG 268 (396)
T ss_dssp EECCTTCHHHHHHHHTCCTTCEEEEEEEECSCCC---CC--CTTCCEEEEEEG
T ss_pred EEEcCCCcchHHHHhcCCCCCEEEEEcCCcceEC---CC--CCCCCEEEEecc
Confidence 5553 667999997 999999999887775421 00 136889888653
No 295
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=24.26 E-value=4.1e+02 Score=26.03 Aligned_cols=66 Identities=15% Similarity=0.269 Sum_probs=43.6
Q ss_pred EecCCceeeeeeccC---CCeEEEEcCCCCeeEEeeeeEEEeccceeEEEEEecCCCCeEEEEEe---------EecceE
Q 015764 285 LVPGGKTCYLSELKS---GKEVIVVDQKGRQRTAVVGRVKIESRPLILVEAKTNSGDQTLYGIIL---------QNAETV 352 (401)
Q Consensus 285 ~~pggkT~YLSEL~s---G~eVLvVd~~G~tR~~~VGRvKIE~RPLlLVeAe~~~~~G~~~sviL---------QnAETI 352 (401)
-.|++++-|.+.... .+.|.++|.+=. . +++++++-..|= |- . +.+|+.+-+-- .++.+|
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~--~-v~~~I~vG~~P~--va--~-spDG~~lyVan~~~~r~~~G~~~~~V 111 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAG--R-VIGMIDGGFLPN--PV--V-ADDGSFIAHASTVFSRIARGERTDYV 111 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTT--E-EEEEEEECSSCE--EE--E-CTTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCC--e-EEEEEECCCCCc--EE--E-CCCCCEEEEEcccccccccCCCCCEE
Confidence 358999999998862 469999997533 2 468999999994 21 1 33677543322 135567
Q ss_pred EEecCC
Q 015764 353 ALVSPC 358 (401)
Q Consensus 353 RLv~p~ 358 (401)
.++.+.
T Consensus 112 sviD~~ 117 (386)
T 3sjl_D 112 EVFDPV 117 (386)
T ss_dssp EEECTT
T ss_pred EEEECC
Confidence 776655
No 296
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=23.84 E-value=90 Score=30.13 Aligned_cols=47 Identities=19% Similarity=0.215 Sum_probs=29.1
Q ss_pred CCeeeehhhhhhcccCCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEec-----CCHHHH
Q 015764 142 DWQVIPAENIVASFQGSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKV-----EDVKAV 196 (401)
Q Consensus 142 DW~iIPlENliA~~q~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~-----~d~~ev 196 (401)
||..| +.++.. .+..||+ .+.+++||..+ +|.|+|||++.+ +||..+
T Consensus 175 ~~~lI--~~I~e~---~~vPVI~eGGI~TPsDAa~A---meLGAdgVlVgSAI~~a~dP~~m 228 (265)
T 1wv2_A 175 NPYNL--RIILEE---AKVPVLVDAGVGTASDAAIA---MELGCEAVLMNTAIAHAKDPVMM 228 (265)
T ss_dssp CHHHH--HHHHHH---CSSCBEEESCCCSHHHHHHH---HHHTCSEEEESHHHHTSSSHHHH
T ss_pred CHHHH--HHHHhc---CCCCEEEeCCCCCHHHHHHH---HHcCCCEEEEChHHhCCCCHHHH
Confidence 45554 444442 2334554 46788888765 566999999875 456543
No 297
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=23.74 E-value=38 Score=30.59 Aligned_cols=62 Identities=11% Similarity=0.074 Sum_probs=40.6
Q ss_pred CCeEEEeCCCCeeeehhhhhhcccCCCceEEE-EcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHH
Q 015764 133 AENIVIDLPDWQVIPAENIVASFQGSGKTVFA-ISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKE 201 (401)
Q Consensus 133 ~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a-~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l~~ 201 (401)
++.+-+ ++..++-+.++++++..+-++++ .+++.++++.. .++.|+|||+ ||+|+.+.++.+
T Consensus 171 ~~~i~~---~~~~~~~~~~v~~~~~~G~~v~~wTvn~~~~~~~~--l~~~GvdgIi--TD~p~~~~~~~~ 233 (248)
T 1zcc_A 171 ASIIEI---TPAQMRRPGIIEASRKAGLEIMVYYGGDDMAVHRE--IATSDVDYIN--LDRPDLFAAVRS 233 (248)
T ss_dssp CSEEEE---CHHHHHSHHHHHHHHHHTCEEEEECCCCCHHHHHH--HHHSSCSEEE--ESCHHHHHHHHH
T ss_pred CCEEEe---cHHHhCCHHHHHHHHHCCCEEEEECCCCHHHHHHH--HHHcCCCEEE--ECCHHHHHHHHH
Confidence 445444 56666335677777666656555 36777776651 4689999977 888987766554
No 298
>2pcn_A S-adenosylmethionine:2-demethylmenaquinone methyltransferase; beta, beta alpha domain; 1.90A {Geobacillus kaustophilus}
Probab=23.64 E-value=23 Score=31.22 Aligned_cols=29 Identities=38% Similarity=0.551 Sum_probs=24.6
Q ss_pred eeeeeccCCCeEEEEcCCCCeeEEeeeeEE
Q 015764 292 CYLSELKSGKEVIVVDQKGRQRTAVVGRVK 321 (401)
Q Consensus 292 ~YLSEL~sG~eVLvVd~~G~tR~~~VGRvK 321 (401)
.+|.++..|+ ||++|..|..+.++.|-.-
T Consensus 48 ~al~~~~~G~-VlVvd~~g~~~~a~~G~~l 76 (161)
T 2pcn_A 48 EALETVPPGT-VLVVDGKGSRRVALLGDRL 76 (161)
T ss_dssp HHHHHSCTTC-EEEEECTTCCSSEEECHHH
T ss_pred HHHHhcCCCC-EEEEECCCCCCceeehHHH
Confidence 4888999995 9999999999999998543
No 299
>4fdy_A Similar to lipoprotein, NLP/P60 family; SLT/lysozyme-like muramidase, NLPC/P60 LD endopeptidase, STR genomics; 2.23A {Staphylococcus aureus subsp}
Probab=23.55 E-value=33 Score=33.34 Aligned_cols=31 Identities=19% Similarity=0.364 Sum_probs=23.7
Q ss_pred CceeeeeecCCCCEEEEEecC-C---Ccccceeee
Q 015764 365 EKAIPVTSLKVGDEVLLRVQG-A---ARHTGIEIQ 395 (401)
Q Consensus 365 g~~vsVt~LK~GD~VL~~~~~-~---gRHfG~~I~ 395 (401)
+.+|+..+|+|||-|...... . ..|+||=+.
T Consensus 245 g~~V~~~~lqpGDLvff~~~~~~g~~~~HVGIYlG 279 (313)
T 4fdy_A 245 TQEISMEEAQAGDLIFFHSTYNAGTYVTHVAIYLE 279 (313)
T ss_dssp SEEECTTTCCTTCEEEESSSSCCSSSCCEEEEEEE
T ss_pred CceechhhCCCCCEEEEecCCCCCCCCcEEEEEec
Confidence 567888999999998876532 2 459999874
No 300
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=23.52 E-value=41 Score=30.09 Aligned_cols=64 Identities=14% Similarity=0.064 Sum_probs=35.7
Q ss_pred CCCCeEEEeCCCCeeeehhhhhhcccCCCce--EEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHH
Q 015764 131 GQAENIVIDLPDWQVIPAENIVASFQGSGKT--VFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKE 201 (401)
Q Consensus 131 ~~~~~vvv~~~DW~iIPlENliA~~q~~~~~--l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l~~ 201 (401)
+..+.+-+..++.. ....++.+.. ... -+..+-+.++++.+ ++.|+|||++...|++-++..+.
T Consensus 37 gGv~~iel~~k~~~---~~~~i~~~~~-~~~~~gag~vl~~d~~~~A---~~~GAd~v~~~~~d~~v~~~~~~ 102 (207)
T 2yw3_A 37 EGVGALEITLRTEK---GLEALKALRK-SGLLLGAGTVRSPKEAEAA---LEAGAAFLVSPGLLEEVAALAQA 102 (207)
T ss_dssp TTCCEEEEECSSTH---HHHHHHHHTT-SSCEEEEESCCSHHHHHHH---HHHTCSEEEESSCCHHHHHHHHH
T ss_pred cCCCEEEEeCCChH---HHHHHHHHhC-CCCEEEeCeEeeHHHHHHH---HHcCCCEEEcCCCCHHHHHHHHH
Confidence 44666666655443 3344554444 221 12223355677666 45699999988777665544443
No 301
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=23.24 E-value=95 Score=31.49 Aligned_cols=56 Identities=11% Similarity=0.150 Sum_probs=34.6
Q ss_pred CCCCeEEEeCCCCeeeehhhhhhcccCC--CceEEE-EcCCHHHHHHHHHHhhcccCeEEEe
Q 015764 131 GQAENIVIDLPDWQVIPAENIVASFQGS--GKTVFA-ISKTPSEAQIFLEALEQGLGGIVLK 189 (401)
Q Consensus 131 ~~~~~vvv~~~DW~iIPlENliA~~q~~--~~~l~a-~v~~~~eA~~al~~LE~G~DGVvl~ 189 (401)
..++.++++...-.---+.++|.++... +..|++ .+.+.++|+.+. +.|+|+|++.
T Consensus 242 aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~---~aGaD~I~Vg 300 (496)
T 4fxs_A 242 AGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALI---EAGVSAVKVG 300 (496)
T ss_dssp TTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHH---HHTCSEEEEC
T ss_pred ccCceEEeccccccchHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHH---HhCCCEEEEC
Confidence 3588999987653222223444444322 234544 588888887665 6799999984
No 302
>2nn6_H Exosome complex exonuclease RRP4; RNA, exosome, PM/SCL, phosphorolytic, hydrolase/transferase complex; 3.35A {Homo sapiens} SCOP: b.40.4.5 b.84.4.2 d.51.1.1
Probab=23.14 E-value=1.1e+02 Score=29.69 Aligned_cols=98 Identities=19% Similarity=0.140 Sum_probs=58.7
Q ss_pred EEecCCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEEeccceeEEEEEe---cCCCCe----EEEEEeEecceEEEec
Q 015764 284 VLVPGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEAKT---NSGDQT----LYGIILQNAETVALVS 356 (401)
Q Consensus 284 v~~pggkT~YLSEL~sG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLVeAe~---~~~~G~----~~sviLQnAETIRLv~ 356 (401)
+.+||+.-..-.+..+|.-+.. .+|+-+....|.++.. .+++-|+... -..-|. ++.-+-++-+.|.+-.
T Consensus 41 iVlPGd~L~~~~~~~~G~Gty~--~~g~I~Asv~G~v~~~-~~~vsV~p~~~rY~P~vGDvViG~Vt~V~~~~a~VdI~s 117 (308)
T 2nn6_H 41 LVVPGDTITTDTGFMRGHGTYM--GEEKLIASVAGSVERV-NKLICVKALKTRYIGEVGDIVVGRITEVQQKRWKVETNS 117 (308)
T ss_dssp BCCTTCBCCCCTTCCBCTTEEE--CSSSEEECSSEEEEEE-TTEEEEEESSCCCCCCSSBCCCEEEEEEETTEEEEECSS
T ss_pred EEeCCCCCCCCCCEeecCCeEE--ECCEEEEEEEEEEEec-CCEEEEeeCCCccCCCCCCEEEEEEEEEeCceEEEEECC
Confidence 4669888777777888877543 4788999999998865 3466666421 001122 2345566777888765
Q ss_pred CCCCCC-------CCCceeee----------eecCCCCEEEEEecC
Q 015764 357 PCKGTG-------EQEKAIPV----------TSLKVGDEVLLRVQG 385 (401)
Q Consensus 357 p~~g~~-------~~g~~vsV----------t~LK~GD~VL~~~~~ 385 (401)
+..+.- +++. +.. ..|++||.|..++..
T Consensus 118 ~~~~~l~iS~v~f~gg~-iR~~~~~D~~~m~~~l~vGDlV~ArVis 162 (308)
T 2nn6_H 118 RLDSVLLLSSMNLPGGE-LRRRSAEDELAMRGFLQEGDLISAEVQA 162 (308)
T ss_dssp SSCEEEESSCCC--------------CHHHHHHSCSSCEECCEEEE
T ss_pred CcCCceechhhccccce-eecccchhhhhhhccCCCCCEEEEEEEE
Confidence 542100 0010 001 358999999988654
No 303
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=22.81 E-value=3.1e+02 Score=23.48 Aligned_cols=109 Identities=11% Similarity=0.110 Sum_probs=56.5
Q ss_pred CchhHhHHHHHhCCcEE--EEcCcc--------hhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhc
Q 015764 58 ESKQVMTAAVERGWNTF--VFLSEN--------QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQ 127 (401)
Q Consensus 58 ~~K~~vt~AlEsG~~~~--v~~~~~--------~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~ 127 (401)
.-.+.+..+.+.|++.+ .+-+.+ .+.++++.+. -+.++-+-+.+.++++.-..+
T Consensus 17 ~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~----------------~~~~~~v~l~v~d~~~~i~~~ 80 (220)
T 2fli_A 17 NFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKH----------------SKLVFDCHLMVVDPERYVEAF 80 (220)
T ss_dssp GHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTT----------------CCSEEEEEEESSSGGGGHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHh----------------CCCCEEEEEeecCHHHHHHHH
Confidence 44678899999999873 331111 2333333322 123344445567765322333
Q ss_pred cccCCCCeEEEeCCCCeeeehhhhhhcccCCCceEEEEc--CCHHHHHHHHHHhhcccCeEEE
Q 015764 128 PADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAIS--KTPSEAQIFLEALEQGLGGIVL 188 (401)
Q Consensus 128 ~~~~~~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v--~~~~eA~~al~~LE~G~DGVvl 188 (401)
... .++.+.+....-.- ++.++.++.+.+.++...+ ++..|+ +..+..++|-|++
T Consensus 81 ~~~-gad~v~vh~~~~~~--~~~~~~~~~~~g~~i~~~~~~~t~~e~---~~~~~~~~d~vl~ 137 (220)
T 2fli_A 81 AQA-GADIMTIHTESTRH--IHGALQKIKAAGMKAGVVINPGTPATA---LEPLLDLVDQVLI 137 (220)
T ss_dssp HHH-TCSEEEEEGGGCSC--HHHHHHHHHHTTSEEEEEECTTSCGGG---GGGGTTTCSEEEE
T ss_pred HHc-CCCEEEEccCcccc--HHHHHHHHHHcCCcEEEEEcCCCCHHH---HHHHHhhCCEEEE
Confidence 333 57888887654322 2334444443345666666 444443 3344566777765
No 304
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=22.56 E-value=88 Score=29.09 Aligned_cols=33 Identities=24% Similarity=0.056 Sum_probs=23.4
Q ss_pred cCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHH
Q 015764 166 SKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKE 201 (401)
Q Consensus 166 v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l~~ 201 (401)
+-+.++|+. +++.|+|.|+....|++-++..++
T Consensus 93 Vlt~~~a~~---Ai~AGA~fIvsP~~~~~vi~~~~~ 125 (232)
T 4e38_A 93 ILNGEQALA---AKEAGATFVVSPGFNPNTVRACQE 125 (232)
T ss_dssp CCSHHHHHH---HHHHTCSEEECSSCCHHHHHHHHH
T ss_pred cCCHHHHHH---HHHcCCCEEEeCCCCHHHHHHHHH
Confidence 456666665 556799999988888776655444
No 305
>2cw8_A Endonuclease PI-pkoii; hydrolase; 2.50A {Thermococcus kodakarensis} PDB: 2cw7_A
Probab=22.46 E-value=2.9e+02 Score=28.17 Aligned_cols=79 Identities=20% Similarity=0.222 Sum_probs=43.1
Q ss_pred CceeeeeeccCCCeEEEEcCCC-CeeEEeeeeE-EEe-ccceeEEEEEecCCCCeEEEEEeEecceEEEecCCCCCCCCC
Q 015764 289 GKTCYLSELKSGKEVIVVDQKG-RQRTAVVGRV-KIE-SRPLILVEAKTNSGDQTLYGIILQNAETVALVSPCKGTGEQE 365 (401)
Q Consensus 289 gkT~YLSEL~sG~eVLvVd~~G-~tR~~~VGRv-KIE-~RPLlLVeAe~~~~~G~~~sviLQnAETIRLv~p~~g~~~~g 365 (401)
+.+-|+ ++. +=+|+.+|.++ +.+...|=+| |.. ..+|+.|+.+ .|+.+.+. ++|==|+-.+ |
T Consensus 40 ~~~e~~-~~~-~~~v~s~d~~~~~~~~~~v~~v~~~~~~~~~~~i~t~----~G~~i~~T---~~H~~l~~~~------g 104 (537)
T 2cw8_A 40 GETEVL-EVS-GLEVPSFNRRTNKAELKRVKALIRHDYSGKVYTIRLK----SGRRIKIT---SGHSLFSVRN------G 104 (537)
T ss_dssp TTEEEE-ECC-SEEEEEECTTTCCEEEEEEEEEEEEEEEEEEEEEEET----TSCEEEEE---TTCEEEEEET------T
T ss_pred CCEEEE-ecC-CeEEEEEeCCCCeEEEEeeeEEEEEcCCCcEEEEEeC----CCCEEEEc---CCceEEEEEC------C
Confidence 444453 443 45788999754 4444444333 112 3678877764 36654332 2222222222 2
Q ss_pred c--eeeeeecCCCCEEEEE
Q 015764 366 K--AIPVTSLKVGDEVLLR 382 (401)
Q Consensus 366 ~--~vsVt~LK~GD~VL~~ 382 (401)
+ .+..-+||+||.|.+-
T Consensus 105 ~~~~~~a~elk~GD~v~~~ 123 (537)
T 2cw8_A 105 ELVEVTGDELKPGDLVAVP 123 (537)
T ss_dssp EEEEEETTTCCTTCEEEEE
T ss_pred EEEEEEhhcCCCCCEEEEe
Confidence 2 3456789999999984
No 306
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens}
Probab=22.45 E-value=41 Score=27.95 Aligned_cols=35 Identities=17% Similarity=0.143 Sum_probs=21.8
Q ss_pred cceEEEecCCCC-CCCCCceeeeeecCCCCEEEEEe
Q 015764 349 AETVALVSPCKG-TGEQEKAIPVTSLKVGDEVLLRV 383 (401)
Q Consensus 349 AETIRLv~p~~g-~~~~g~~vsVt~LK~GD~VL~~~ 383 (401)
+.+++++..+.. .-+....|++.+|+|||.|+++-
T Consensus 17 p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~ 52 (124)
T 2kij_A 17 ATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVP 52 (124)
T ss_dssp CSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCT
T ss_pred CCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECC
Confidence 456666653211 00002468999999999999863
No 307
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=22.28 E-value=66 Score=27.09 Aligned_cols=41 Identities=27% Similarity=0.312 Sum_probs=29.4
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecC-CHHHHHHHH
Q 015764 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE-DVKAVLALK 200 (401)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~-d~~ev~~l~ 200 (401)
...++...... +......+++.|++|.+.+|- +++++.+.-
T Consensus 68 ~~~ii~lt~~~-~~~~~~~~~~~Ga~~~l~Kp~~~~~~L~~~i 109 (223)
T 2hqr_A 68 SIVVLVSSDNP-TSEEEVHAFEQGADDYIAKPYRSIKALVARI 109 (223)
T ss_dssp TSEEEEEESSC-CHHHHHHHHHHTCSEEEETTCSCTHHHHHHH
T ss_pred CCcEEEEECCC-CHHHHHHHHHcCCCEEEECCCCCHHHHHHHH
Confidence 45566555443 345667888999999999999 988776443
No 308
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=22.27 E-value=76 Score=28.94 Aligned_cols=32 Identities=19% Similarity=0.124 Sum_probs=26.7
Q ss_pred HHHHHHHhhcccCeEEEecCCHHHHHHHHHhh
Q 015764 172 AQIFLEALEQGLGGIVLKVEDVKAVLALKEYF 203 (401)
Q Consensus 172 A~~al~~LE~G~DGVvl~~~d~~ev~~l~~~~ 203 (401)
-+.+-.+.+.|+||+|..+..|.+++.+++.+
T Consensus 125 ~~~a~~a~~~g~~GvV~sat~p~e~~~ir~~~ 156 (222)
T 4dbe_A 125 DYIKNVIREISPKGIVVGGTKLDHITQYRRDF 156 (222)
T ss_dssp HHHHHHHHHHCCSEEEECTTCHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCEEEECCCCHHHHHHHHHhC
Confidence 45666777899999999998899998888765
No 309
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=22.22 E-value=91 Score=24.37 Aligned_cols=40 Identities=13% Similarity=0.087 Sum_probs=27.6
Q ss_pred ceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHH
Q 015764 160 KTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALK 200 (401)
Q Consensus 160 ~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ev~~l~ 200 (401)
..++....+. +......+++.|+++.+.+|-+++++.+.-
T Consensus 91 ~pii~~s~~~-~~~~~~~~~~~Ga~~~l~KP~~~~~L~~~l 130 (143)
T 3m6m_D 91 TPVVVLSADV-TPEAIRACEQAGARAFLAKPVVAAKLLDTL 130 (143)
T ss_dssp CCEEEEESCC-CHHHHHHHHHTTCSEEEESSCCHHHHHHHH
T ss_pred CeEEEEeCCC-CHHHHHHHHHcChhheeeCCCCHHHHHHHH
Confidence 3455544432 234456788999999999999998776443
No 310
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=22.04 E-value=1.9e+02 Score=24.13 Aligned_cols=32 Identities=16% Similarity=0.414 Sum_probs=23.9
Q ss_pred HHHHHHHhhcccCeEEEec---CCHHHHHHHHHhh
Q 015764 172 AQIFLEALEQGLGGIVLKV---EDVKAVLALKEYF 203 (401)
Q Consensus 172 A~~al~~LE~G~DGVvl~~---~d~~ev~~l~~~~ 203 (401)
......+++.|+|+++.+| +....+..+...+
T Consensus 65 ~~~~~~~~~~Ga~~~l~kp~~~~~~~l~~~i~~~~ 99 (237)
T 3cwo_X 65 QAMVIEAIKAGAKDFIVNTAAVENPSLITQIAQTF 99 (237)
T ss_dssp HHHHHHHHHTTCCEEEESHHHHHCTHHHHHHHHHH
T ss_pred HHHHHHHHHCCHHheEeCCcccChHHHHHHHHHHh
Confidence 5566788999999999998 5556555555554
No 311
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=21.99 E-value=91 Score=27.16 Aligned_cols=21 Identities=14% Similarity=0.194 Sum_probs=16.6
Q ss_pred eeecCCCCEEEEEecCCCccc
Q 015764 370 VTSLKVGDEVLLRVQGAARHT 390 (401)
Q Consensus 370 Vt~LK~GD~VL~~~~~~gRHf 390 (401)
.--.|+||.|-+....+.++|
T Consensus 128 LlGk~vGD~v~v~~P~G~~~~ 148 (158)
T 2p4v_A 128 LLKKEVGDLAVVNTPAGEASW 148 (158)
T ss_dssp STTCCTTCEEEEECSSCEEEE
T ss_pred hcCCCCCCEEEEEcCCCcEEE
Confidence 345799999999998886554
No 312
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=21.78 E-value=4e+02 Score=23.22 Aligned_cols=111 Identities=10% Similarity=0.069 Sum_probs=59.9
Q ss_pred CchhHhHHHHHhCCcEEEEc-------Cc---chhhHhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhc
Q 015764 58 ESKQVMTAAVERGWNTFVFL-------SE---NQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQ 127 (401)
Q Consensus 58 ~~K~~vt~AlEsG~~~~v~~-------~~---~~~~~~~~~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~e~~e~~~ 127 (401)
.-.+.+..+.+.|++.+=+. +. ..+.++++.+.. +..+.+.+.+.++++.-..+
T Consensus 24 ~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~----------------~~~~~v~l~vnd~~~~v~~~ 87 (230)
T 1rpx_A 24 KLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPIT----------------DLPLDVHLMIVEPDQRVPDF 87 (230)
T ss_dssp GHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGC----------------CSCEEEEEESSSHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhcc----------------CCcEEEEEEecCHHHHHHHH
Confidence 45788999999999965443 11 123444443321 22333445577766322233
Q ss_pred cccCCCCeEEEeCC--CCeeeehhhhhhcccCCCceEEEEc--CCHHHHHHHHHHhhcccCeEEEec
Q 015764 128 PADGQAENIVIDLP--DWQVIPAENIVASFQGSGKTVFAIS--KTPSEAQIFLEALEQGLGGIVLKV 190 (401)
Q Consensus 128 ~~~~~~~~vvv~~~--DW~iIPlENliA~~q~~~~~l~a~v--~~~~eA~~al~~LE~G~DGVvl~~ 190 (401)
.. ..++.+.+... .-.- ++.++.++.+.+..+...+ .+..|+ +..+..|+|-|++.+
T Consensus 88 ~~-~Gad~v~vh~~~~~~~~--~~~~~~~~~~~g~~ig~~~~p~t~~e~---~~~~~~~~d~vl~~~ 148 (230)
T 1rpx_A 88 IK-AGADIVSVHCEQSSTIH--LHRTINQIKSLGAKAGVVLNPGTPLTA---IEYVLDAVDLVLIMS 148 (230)
T ss_dssp HH-TTCSEEEEECSTTTCSC--HHHHHHHHHHTTSEEEEEECTTCCGGG---GTTTTTTCSEEEEES
T ss_pred HH-cCCCEEEEEecCccchh--HHHHHHHHHHcCCcEEEEeCCCCCHHH---HHHHHhhCCEEEEEE
Confidence 32 46888988776 4322 2455666544444555555 344443 233456788775543
No 313
>3nfg_A DNA-directed RNA polymerase I subunit RPA49; triple barrel, transcription, dimerization; 2.51A {Candida glabrata}
Probab=21.68 E-value=23 Score=29.68 Aligned_cols=27 Identities=26% Similarity=0.541 Sum_probs=21.4
Q ss_pred CceEEEeccCceE------------------EEEeeccccCCCCC
Q 015764 243 GEGLLVGSFARGL------------------FLVHSECLESNYIA 269 (401)
Q Consensus 243 GEGmLVGS~s~gl------------------FLVhsEt~es~Yva 269 (401)
.--+.||||+.|+ +|+|+||....|++
T Consensus 18 ~p~~~v~~f~pGl~~P~~t~F~lY~kk~~~e~lLhgEt~rLdY~g 62 (102)
T 3nfg_A 18 DPSVVVSNFFKGVRVPKDTEFQLYKKRKQDQFVLHGENERLEYDG 62 (102)
T ss_dssp SCCCEEEECCTTCCCCTTCEEEEEEECCCCCEEEEEECSSEEEEE
T ss_pred CCCEEEEeccCCccCCCCceeEeeecCCCcceEEEeCCCceEEEe
Confidence 4457889999888 88999997667754
No 314
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=21.60 E-value=1.9e+02 Score=25.46 Aligned_cols=93 Identities=19% Similarity=0.213 Sum_probs=50.2
Q ss_pred eEEEEEecCh--hhhhhhcc--ccCCCCeEEEe------CCCCeeee---------------hhhhhhcccCC-CceEEE
Q 015764 111 VGSIIEVSTP--QELQQLQP--ADGQAENIVID------LPDWQVIP---------------AENIVASFQGS-GKTVFA 164 (401)
Q Consensus 111 v~~~~~v~~~--e~~e~~~~--~~~~~~~vvv~------~~DW~iIP---------------lENliA~~q~~-~~~l~a 164 (401)
+..++.-.++ ++....+. ..+ ++++-+. ..|-..|| .-.+|.++... +..|..
T Consensus 7 ~~~~i~~~~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~pv~~ 85 (248)
T 1geq_A 7 LIPYLTAGDPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPIVL 85 (248)
T ss_dssp EEEEEETTSSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCCCEEE
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCCCEEE
Confidence 4455555555 33333322 224 8888887 44555555 13345544332 233444
Q ss_pred EcC-CHH----HHHHHHHHhhcccCeEEEecCCHHHHHHHHHhhc
Q 015764 165 ISK-TPS----EAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFD 204 (401)
Q Consensus 165 ~v~-~~~----eA~~al~~LE~G~DGVvl~~~d~~ev~~l~~~~~ 204 (401)
-.. +.- -.+.+-.+++.|+|||++....+.+..++.+.+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~ 130 (248)
T 1geq_A 86 MTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAR 130 (248)
T ss_dssp EECHHHHHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHH
T ss_pred EeccchhhhcCHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHH
Confidence 431 330 0233445567799999999877776666666553
No 315
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=21.59 E-value=5.4e+02 Score=26.05 Aligned_cols=81 Identities=15% Similarity=0.145 Sum_probs=48.5
Q ss_pred eeeecC-CceeEEEecCCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEEeccceeEEEEEecCCCCeEEEEEeEecce
Q 015764 273 FRVNAG-PVHAYVLVPGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEAKTNSGDQTLYGIILQNAET 351 (401)
Q Consensus 273 FRVNAG-aVHaYv~~pggkT~YLSEL~sG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLVeAe~~~~~G~~~sviLQnAET 351 (401)
.++..| .+|.-+..|+||.-|.+. -.+.|.++|..-.+. ..+.+++.-..|--+.=......+|+.+-+.-...-+
T Consensus 191 ~~i~~g~~p~~v~~SpDGr~lyv~~--~dg~V~viD~~~~t~-~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~ 267 (567)
T 1qks_A 191 TVLDTGYAVHISRLSASGRYLFVIG--RDGKVNMIDLWMKEP-TTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQ 267 (567)
T ss_dssp EEEECSSCEEEEEECTTSCEEEEEE--TTSEEEEEETTSSSC-CEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTE
T ss_pred EEEeCCCCccceEECCCCCEEEEEc--CCCeEEEEECCCCCC-cEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCe
Confidence 355566 568778889999999885 245899999841122 2356777777764221110000267765555555556
Q ss_pred EEEec
Q 015764 352 VALVS 356 (401)
Q Consensus 352 IRLv~ 356 (401)
|.++.
T Consensus 268 v~ViD 272 (567)
T 1qks_A 268 YVIMD 272 (567)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66654
No 316
>3npf_A Putative dipeptidyl-peptidase VI; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: CSA GOL; 1.72A {Bacteroides ovatus} PDB: 3pvq_A
Probab=21.58 E-value=41 Score=31.48 Aligned_cols=31 Identities=26% Similarity=0.433 Sum_probs=22.7
Q ss_pred Cceeee----eecCCCCEEEEEe------cCCCcccceeee
Q 015764 365 EKAIPV----TSLKVGDEVLLRV------QGAARHTGIEIQ 395 (401)
Q Consensus 365 g~~vsV----t~LK~GD~VL~~~------~~~gRHfG~~I~ 395 (401)
|.+++. .+|+|||-|.... .....|+||-+.
T Consensus 209 g~~v~~~~~~~~~~pGDLvff~~~~~~~~~~~~~Hvgiy~g 249 (306)
T 3npf_A 209 GEHIDIAPDFSNVKRGDLVFFGRKATAERKEGISHVGIYLG 249 (306)
T ss_dssp SEEECCCTTCTTCCTTCEEEEEECCCSSSCCEEEEEEEEEE
T ss_pred CcEecccCccccCCCccEEEECCCCccCCCCCCeEEEEEEC
Confidence 566664 7999999888776 223349999884
No 317
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=21.52 E-value=37 Score=33.36 Aligned_cols=39 Identities=26% Similarity=0.424 Sum_probs=25.5
Q ss_pred CCceeeeeeccCCCeEEE-E-cCCCCeeEEeeeeEEEeccceeEEE
Q 015764 288 GGKTCYLSELKSGKEVIV-V-DQKGRQRTAVVGRVKIESRPLILVE 331 (401)
Q Consensus 288 ggkT~YLSEL~sG~eVLv-V-d~~G~tR~~~VGRvKIE~RPLlLVe 331 (401)
|--|+||++|+.||.|-+ + ...|.-+.-. -..+|++||=
T Consensus 207 G~~S~~L~~l~~Gd~v~v~v~~P~g~F~lp~-----~~~~piImIg 247 (393)
T 4dql_A 207 GIASNYLAELQEGDTITCFISTPQSEFTLPK-----DPETPLIMVG 247 (393)
T ss_dssp CHHHHHHHHCCTTCEEEEEEECCSSCCCCCS-----STTSCEEEEC
T ss_pred CccchhHHhCCCcCEEEEEEEcCCCCcccCc-----cCCCCeEEEc
Confidence 446899999999999985 3 4566542210 0246888773
No 318
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ...
Probab=21.30 E-value=24 Score=32.23 Aligned_cols=41 Identities=20% Similarity=0.353 Sum_probs=27.5
Q ss_pred CCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEEeccceeEEEE
Q 015764 288 GGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEA 332 (401)
Q Consensus 288 ggkT~YLSEL~sG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLVeA 332 (401)
|--|+||++|+.||+|.+-...|+.-... .-..+|++||=+
T Consensus 116 G~~S~~L~~l~~Gd~v~v~gP~G~~~~~~----~~~~~~~vlIag 156 (304)
T 2bmw_A 116 GVCSTYLTHIEPGSEVKITGPVGKEMLLP----DDPEANVIMLAG 156 (304)
T ss_dssp CHHHHHHHTCCTTCEEEEEEEECSSSCCC----SCTTCEEEEEEE
T ss_pred cchhhHHhcCCCCCEEEEEeccCCceeCC----CCCCCCEEEEec
Confidence 33789999999999999987777532100 012467777744
No 319
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=21.29 E-value=1.1e+02 Score=27.54 Aligned_cols=35 Identities=11% Similarity=0.272 Sum_probs=27.8
Q ss_pred CCCcEEEEEe-CchhHhHHHHHhCCcEEEEcCcchhhHh
Q 015764 48 SKPKRVWIWT-ESKQVMTAAVERGWNTFVFLSENQQLAI 85 (401)
Q Consensus 48 ~~~K~vWiw~-~~K~~vt~AlEsG~~~~v~~~~~~~~~~ 85 (401)
...+.||+|| .+++.+...++. +|+|+.+. .+...
T Consensus 196 ~~G~~v~~wTvn~~~~~~~l~~~-vdgIiTD~--P~~~~ 231 (234)
T 1o1z_A 196 KKGIVIFVWTLNDPEIYRKIRRE-IDGVITDE--VELFV 231 (234)
T ss_dssp HTTCEEEEESCCCHHHHHHHGGG-CSEEEESC--HHHHH
T ss_pred HcCCEEEEeCCCCHHHHHHHHHh-CCEEEcCC--HHHHh
Confidence 4567899999 678899999999 99999865 44443
No 320
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=21.13 E-value=1.6e+02 Score=25.42 Aligned_cols=28 Identities=7% Similarity=0.114 Sum_probs=18.9
Q ss_pred HHHHHHhhcccCeEEEecCCHHHHH-HHH
Q 015764 173 QIFLEALEQGLGGIVLKVEDVKAVL-ALK 200 (401)
Q Consensus 173 ~~al~~LE~G~DGVvl~~~d~~ev~-~l~ 200 (401)
+..-..+++++|||++.+.+.+.+. .++
T Consensus 55 ~~~~~l~~~~~dgiIi~~~~~~~~~~~l~ 83 (277)
T 3e61_A 55 GYLATFVSHNCTGMISTAFNENIIENTLT 83 (277)
T ss_dssp HHHHHHHHTTCSEEEECGGGHHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEEecCChHHHHHHHH
Confidence 3334456799999999996666554 444
No 321
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=21.09 E-value=1.4e+02 Score=25.99 Aligned_cols=64 Identities=13% Similarity=0.144 Sum_probs=39.6
Q ss_pred ecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhh----cccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEe
Q 015764 117 VSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVA----SFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLK 189 (401)
Q Consensus 117 v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA----~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~ 189 (401)
.++++.++.+. ...++.+|+...|- -.|+.+ +-.+.+.++++.+.+.+.++.+. +.|+|-|+..
T Consensus 58 ~~~~~~l~~a~--i~~ad~vi~~~~~d----~~n~~~~~~a~~~~~~~~iia~~~~~~~~~~l~---~~G~~~vi~p 125 (234)
T 2aef_A 58 PTRVSDLEKAN--VRGARAVIVDLESD----SETIHCILGIRKIDESVRIIAEAERYENIEQLR---MAGADQVISP 125 (234)
T ss_dssp TTCHHHHHHTT--CTTCSEEEECCSCH----HHHHHHHHHHHHHCSSSEEEEECSSGGGHHHHH---HHTCSEEECH
T ss_pred CCCHHHHHhcC--cchhcEEEEcCCCc----HHHHHHHHHHHHHCCCCeEEEEECCHhHHHHHH---HCCCCEEECH
Confidence 44555544432 44678888865542 334432 22234458999999999987654 5799976543
No 322
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=21.05 E-value=3.9e+02 Score=22.78 Aligned_cols=71 Identities=11% Similarity=0.141 Sum_probs=42.7
Q ss_pred eecCCCCCCceEEEecc-CceEEEEeeccccCCCCCCCCeeeecC---CceeEEEecCCceeeeeeccCCCeEEEEcCCC
Q 015764 235 DLCSLMRPGEGLLVGSF-ARGLFLVHSECLESNYIASRPFRVNAG---PVHAYVLVPGGKTCYLSELKSGKEVIVVDQKG 310 (401)
Q Consensus 235 Dtcsll~~GEGmLVGS~-s~glFLVhsEt~es~Yva~RPFRVNAG---aVHaYv~~pggkT~YLSEL~sG~eVLvVd~~G 310 (401)
||+-.+.++.-++|-+. ...+.++..++.+. --+++.+ .+|+....|+|+.-|.+. .....|.++|.+.
T Consensus 2 ~~g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~------~~~~~~~~~~~~~~~~~s~dg~~~~v~~-~~~~~i~~~d~~t 74 (349)
T 1jmx_B 2 DTGPALKAGHEYMIVTNYPNNLHVVDVASDTV------YKSCVMPDKFGPGTAMMAPDNRTAYVLN-NHYGDIYGIDLDT 74 (349)
T ss_dssp --CCCCCTTCEEEEEEETTTEEEEEETTTTEE------EEEEECSSCCSSCEEEECTTSSEEEEEE-TTTTEEEEEETTT
T ss_pred CccccccCCCEEEEEeCCCCeEEEEECCCCcE------EEEEecCCCCCCceeEECCCCCEEEEEe-CCCCcEEEEeCCC
Confidence 67777788777666554 44555555444221 1123323 367778889999888886 3345788888764
Q ss_pred Ce
Q 015764 311 RQ 312 (401)
Q Consensus 311 ~t 312 (401)
..
T Consensus 75 ~~ 76 (349)
T 1jmx_B 75 CK 76 (349)
T ss_dssp TE
T ss_pred Cc
Confidence 33
No 323
>1nxj_A Probable S-adenosylmethionine:2- demethylmenaquinone methyltransferase; beta/BETA/alpha domain, structural genomics, PSI; HET: TLA; 1.90A {Mycobacterium tuberculosis} SCOP: c.8.7.1
Probab=20.99 E-value=29 Score=31.37 Aligned_cols=29 Identities=41% Similarity=0.580 Sum_probs=24.8
Q ss_pred eeeeeccCCCeEEEEcCCCCeeEEeeeeEE
Q 015764 292 CYLSELKSGKEVIVVDQKGRQRTAVVGRVK 321 (401)
Q Consensus 292 ~YLSEL~sG~eVLvVd~~G~tR~~~VGRvK 321 (401)
.+|.+...|+ ||++|..|..+.+.+|-.-
T Consensus 79 ~al~~~~~G~-VlVvd~~g~~~~A~~G~~l 107 (183)
T 1nxj_A 79 SVLSQPSAGG-VLVIDGAGSLHTALVGDVI 107 (183)
T ss_dssp HHHHSCCSSC-EEEEECTTCCSSEEECHHH
T ss_pred HHHHhcCCCC-EEEEECCCCCCceeeHHHH
Confidence 5888999995 9999999999999998543
No 324
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=20.79 E-value=1.2e+02 Score=23.52 Aligned_cols=81 Identities=11% Similarity=0.052 Sum_probs=40.3
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (401)
...+.++.-.... ....+.++++..-.. +.--.++..+. .....++...... +...+..+++.|+++.+.+|-++
T Consensus 34 ~~~~~~~al~~~~-~~~~dlvllD~~lp~-~~g~~l~~~l~~~~~~~~ii~ls~~~-~~~~~~~~~~~ga~~~l~KP~~~ 110 (141)
T 3cu5_A 34 QADDGINAIQIAL-KHPPNVLLTDVRMPR-MDGIELVDNILKLYPDCSVIFMSGYS-DKEYLKAAIKFRAIRYVEKPIDP 110 (141)
T ss_dssp EESSHHHHHHHHT-TSCCSEEEEESCCSS-SCHHHHHHHHHHHCTTCEEEEECCST-TTCCC------CCCEEECSSCCH
T ss_pred ecccHHHHHHHHh-cCCCCEEEEeCCCCC-CCHHHHHHHHHhhCCCCcEEEEeCCC-cHHHHHHHHhCCccEEEeCCCCH
Confidence 3555554333222 224677777543211 22223344332 2345666655443 33456678899999999999999
Q ss_pred HHHHHH
Q 015764 194 KAVLAL 199 (401)
Q Consensus 194 ~ev~~l 199 (401)
+++.+.
T Consensus 111 ~~L~~~ 116 (141)
T 3cu5_A 111 SEIMDA 116 (141)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877543
No 325
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=20.74 E-value=1.6e+02 Score=27.32 Aligned_cols=18 Identities=11% Similarity=0.200 Sum_probs=13.1
Q ss_pred hHhHHHHHhCCcEEEEcC
Q 015764 61 QVMTAAVERGWNTFVFLS 78 (401)
Q Consensus 61 ~~vt~AlEsG~~~~v~~~ 78 (401)
+.+..++..|+++|++|+
T Consensus 75 ~dl~~~~~~g~~gi~lPK 92 (273)
T 1u5h_A 75 RDLEALAGTAYTTVMLPK 92 (273)
T ss_dssp HHHHHHHTSCCCEEEETT
T ss_pred HHHHHHHhcCCCEEEeCC
Confidence 556667777888888776
No 326
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=20.61 E-value=1.2e+02 Score=29.54 Aligned_cols=55 Identities=16% Similarity=0.215 Sum_probs=32.8
Q ss_pred CCCCeEEEeCCCCeeeehhhhhhcccC-CCceEEE-EcCCHHHHHHHHHHhhcccCeEEE
Q 015764 131 GQAENIVIDLPDWQVIPAENIVASFQG-SGKTVFA-ISKTPSEAQIFLEALEQGLGGIVL 188 (401)
Q Consensus 131 ~~~~~vvv~~~DW~iIPlENliA~~q~-~~~~l~a-~v~~~~eA~~al~~LE~G~DGVvl 188 (401)
..++.++++...-.--.+.+.|.++.. .+..+++ .+.+.++|+.+ .+.|+|+|.+
T Consensus 116 aGad~I~ld~a~G~~~~~~~~i~~i~~~~~~~Vivg~v~t~e~A~~l---~~aGaD~I~V 172 (361)
T 3khj_A 116 AGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKEL---IENGADGIKV 172 (361)
T ss_dssp TTCSEEEECCSCCSBHHHHHHHHHHHHHCCCEEEEEEECSHHHHHHH---HHTTCSEEEE
T ss_pred cCcCeEEEeCCCCCcHHHHHHHHHHHHhcCCcEEEccCCCHHHHHHH---HHcCcCEEEE
Confidence 358888886442110111223332211 1456775 88999988765 4789999998
No 327
>3bmb_A Regulator of nucleoside diphosphate kinase; RNA polymerase, elongation factor, anti-GRE factor, RNA binding protein; 1.91A {Escherichia coli}
Probab=20.54 E-value=1e+02 Score=25.90 Aligned_cols=20 Identities=35% Similarity=0.621 Sum_probs=15.7
Q ss_pred eecCCCCEEEEEecCC-Cccc
Q 015764 371 TSLKVGDEVLLRVQGA-ARHT 390 (401)
Q Consensus 371 t~LK~GD~VL~~~~~~-gRHf 390 (401)
--.|+||+|-+....+ .++|
T Consensus 99 lGk~~GD~v~v~~p~G~~~~~ 119 (136)
T 3bmb_A 99 LGLRVGDSIHWELPGGVATHL 119 (136)
T ss_dssp TTCBTTCEEEEEETTTEEEEE
T ss_pred cCCCCCCEEEEEcCCCCEEEE
Confidence 4579999999999877 5544
No 328
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=20.42 E-value=2.9e+02 Score=26.63 Aligned_cols=70 Identities=16% Similarity=0.186 Sum_probs=44.2
Q ss_pred EecChhhhhhhccccCCCCeEEEeCC-----------CCeeee----hhhhhhcccCCCceEEE--EcCCHHHHHHHHHH
Q 015764 116 EVSTPQELQQLQPADGQAENIVIDLP-----------DWQVIP----AENIVASFQGSGKTVFA--ISKTPSEAQIFLEA 178 (401)
Q Consensus 116 ~v~~~e~~e~~~~~~~~~~~vvv~~~-----------DW~iIP----lENliA~~q~~~~~l~a--~v~~~~eA~~al~~ 178 (401)
.+.++++...+.. ..+|.+++... +|. +| +..+.++.+..+..|++ .+.+..|+. .+
T Consensus 168 ~v~t~e~A~~a~~--aGaD~I~v~~g~G~~~~~r~~~g~~-~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~---kA 241 (351)
T 2c6q_A 168 NVVTGEMVEELIL--SGADIIKVGIGPGSVCTTRKKTGVG-YPQLSAVMECADAAHGLKGHIISDGGCSCPGDVA---KA 241 (351)
T ss_dssp EECSHHHHHHHHH--TTCSEEEECSSCSTTBCHHHHHCBC-CCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHH---HH
T ss_pred eCCCHHHHHHHHH--hCCCEEEECCCCCcCcCccccCCCC-ccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHH---HH
Confidence 5788887544433 35888878421 232 33 23343333333567888 788888765 56
Q ss_pred hhcccCeEEEecC
Q 015764 179 LEQGLGGIVLKVE 191 (401)
Q Consensus 179 LE~G~DGVvl~~~ 191 (401)
|..|+|+|.+-+.
T Consensus 242 lalGA~~V~vG~~ 254 (351)
T 2c6q_A 242 FGAGADFVMLGGM 254 (351)
T ss_dssp HHTTCSEEEESTT
T ss_pred HHcCCCceeccHH
Confidence 7789999998775
No 329
>3fn2_A Putative sensor histidine kinase domain; GUT microbiome, structural genomics protein structure initiative; HET: MSE; 1.90A {Clostridium symbiosum atcc 14940}
Probab=20.40 E-value=1.3e+02 Score=25.48 Aligned_cols=40 Identities=15% Similarity=0.188 Sum_probs=27.5
Q ss_pred ceEEEecCCCCCCCCCceeeeeecCCCCEEEEEecCCCcccceeee
Q 015764 350 ETVALVSPCKGTGEQEKAIPVTSLKVGDEVLLRVQGAARHTGIEIQ 395 (401)
Q Consensus 350 ETIRLv~p~~g~~~~g~~vsVt~LK~GD~VL~~~~~~gRHfG~~I~ 395 (401)
+.+|+...+ |..+-=-..-++|+.-+-.++++-|+|.+++
T Consensus 50 ~~lrI~D~~------G~vi~~~~~~a~~~~~vLa~~g~n~lGW~Le 89 (106)
T 3fn2_A 50 GYVRITDKD------GQVITYEDGSVQDKTVFLTNEGANKLGWKLE 89 (106)
T ss_dssp CEEEEECTT------SCBCSCCCSCSTTEEEEEEECSCCTTCCEEE
T ss_pred CcEEEEcCC------CCEEecCCCCcCcceeehhhcCCCccceEEE
Confidence 345666555 4444433344578888888999999999985
Done!